LOCUS       DANLXD010000001        60754 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.001, whole genome shotgun sequence.
ACCESSION   DANLXD010000001 DANLXD010000000
VERSION     DANLXD010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 60754)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 60754)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..60754
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.001"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            69..287
                     /locus_tag="PXD18_000001"
     CDS             69..287
                     /locus_tag="PXD18_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6300479.1"
                     /translation="MARNKRVRDMSNFEIRGELMKIGKSLSQLGIENGLAKTTVRNAL
                     DKPYPKGEQIIAKAIGKTPQEIWPSRYE"
     gene            297..2267
                     /locus_tag="PXD18_000002"
     CDS             297..2267
                     /locus_tag="PXD18_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /protein_id="HDL6300480.1"
                     /translation="MKEWFLAKEIAGLSGVPELPNSVSRLATKEGWQKRQIQGVRGVT
                     YEYHLTSLPIETQQQLRLNAALAVIPQAAELQPKRDDPALIARLNNATDKGRDKAKGK
                     AEACMQLQAFLDQGFSYTQAEAGAATAKNVSQGSLKNWYYKVKGHPVHLWQAILISES
                     GRSKKPQLKAKITEEAWDCFLADYLRPEKPDLRASYRRTQAIAKQYGWQIASLQTFQR
                     RVLAEVPYEVILLKREGANAVAKLVPALQRTVKDILAGEWINGDGYQHNVFVKWHTGE
                     IVRPKTWFWQDVRTRKILGYRTSISENTDSIRHALMDVIFNVGIPKTLTLDNTRAAAN
                     KAMTGGIENRYRFKHTELDPKGIMPILGIDVHFTSILYGEGHGQAKPIERAFGRGGIG
                     EKIDKRPELSGFYTGRNAQETPDNYNGGKDGVDYNTFLKAIAAGIEEYNSQTERHTEM
                     CRGELSFNQVWERDYHPSNVRQASPEQLRLLFLQAETVSIKRNGSFTLKAAGKLYGLT
                     NVYWAESLIGITDKKVVARFDPDDLHGNVYVYNLEGQFLAEAVCREAKGFGDTSASRE
                     QGRLYQKVVKSAKAQAEALELLEAHELASLAPQVDVPEPIEKKVKEVLVKEDFIVDFN
                     TVRKATVVEETEEISIFDEVLLKQEKQLRIVE"
     gene            complement(2447..2935)
                     /locus_tag="PXD18_000003"
     CDS             complement(2447..2935)
                     /locus_tag="PXD18_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300481.1"
                     /translation="MLFRSLTDDEIHQIALDSARATFSGFKLKRANAIVMKNCITLFK
                     LSTINFCLAEYHSSFHHLTSIDDLDGIMPTVKKVAQMLSLQESKALIWLLYLKWLFVM
                     RQRSLQVLLENSADLIQGEVIAQPLPTFVKAVLAFQLETYHGLPEWIPEFDSAEFWQS
                     LS"
     gene            2967..3908
                     /locus_tag="PXD18_000004"
     CDS             2967..3908
                     /locus_tag="PXD18_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL6300482.1"
                     /translation="MTLIDQIKQHIAESGSSQGKVAKEAGINAGALSAYLNENYKGNN
                     EELEAKLIAYLERIEAKKREFVEAPSFIETKTANQIFGSLRFAQNTGVLAIIHGASGV
                     GKTQAAREYRKRYANVWLVTASPSRSSLSEVLYEIALELGMNDAPRRKGTLARLIVRK
                     MKGTAGLLIIDEADHLPYEALEELRLLQEEVVNESDIGAGVGLVLIGNDKVYTRMKGG
                     INPAHEYGRLWSRSAKRTSIQKTKKEDTQAVAKAWGLSENQEALKVMQAITETGGGLR
                     ILTHTLRLAAMVAKDRMIPLTADLIQLARKDLLSTGD"
     gene            3911..4225
                     /locus_tag="PXD18_000005"
     CDS             3911..4225
                     /locus_tag="PXD18_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300483.1"
                     /translation="MRTPKPKHSFNRTNQAACRFLKQTQKAIIRLNSLGFTVLNIDFT
                     RIKPRIEVEIGNNKHIAQGLIYEGKAYRYSFGKSEDLGRWEGYYTMLEGIRVWWRQAA
                     IH"
     gene            4237..4473
                     /locus_tag="PXD18_000006"
     CDS             4237..4473
                     /locus_tag="PXD18_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300484.1"
                     /translation="MKTLALLTALLGLVGCDLVQSKQAKNYIGNNLTEICIDNVVYLI
                     YSGDKKGGITPKVNKDFYPYTCTNKEERQNGKTR"
     gene            4457..4750
                     /locus_tag="PXD18_000007"
     CDS             4457..4750
                     /locus_tag="PXD18_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300485.1"
                     /translation="MAKPDETPITKAECQSQLAELGVQYKKLPMAITRHICNATTNIH
                     GKVIKVSVVERVGYGVQITAQGNEKSCLVTYEAMLGMAEAMGLFDEVKEQNND"
     gene            4872..5090
                     /locus_tag="PXD18_000008"
     CDS             4872..5090
                     /locus_tag="PXD18_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HDL6300486.1"
                     /translation="MNDELAAISASYAQHNRYQHYAEKAAEAERKGNYKEAQDHWEVA
                     KLSAKKTANRDWAEQRAEFCKRMHNKPF"
     gene            5100..5282
                     /locus_tag="PXD18_000009"
     CDS             5100..5282
                     /locus_tag="PXD18_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300487.1"
                     /translation="MTETVKAQLNSQLNEAIIQLIQAQKYLNQDDAIRSGVYIGTVQD
                     LLPKVHLKLLTANRKH"
     gene            5299..5688
                     /locus_tag="PXD18_000010"
     CDS             5299..5688
                     /locus_tag="PXD18_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300488.1"
                     /translation="MAITEEQWKEIKQKLDSIIGRVKFRYKEHLLTVDVVQIKRSLKL
                     AVYVDGEIDGAWTKEGHEIRPYLEEVWYRKERPFFNAKEKKEYRGLMSKKKLNEKIVT
                     YSPMFPSPTALTRQYKKLDGLELIEVI"
     gene            5737..6024
                     /locus_tag="PXD18_000011"
     CDS             5737..6024
                     /locus_tag="PXD18_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300489.1"
                     /translation="MNKNEFFKKYHLEGSLAILDLDANDDQSQFCYQALLEYRELPLD
                     TFLAEYSDDEDMTESEFIELMLDELEWIIRRAKNAKRFVKKRQKTMREEIM"
     gene            6143..6688
                     /locus_tag="PXD18_000012"
     CDS             6143..6688
                     /locus_tag="PXD18_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1018 domain-containing protein"
                     /protein_id="HDL6300490.1"
                     /translation="MTDKAKLIQLIHIAKSQLAMDDLSYREMLKRLTNKTSSTKCTVV
                     ELHKVLHELQTKGAKVKYFAKRSKKPTAYSPATGETAVKSQIAHKIRAVWITMGKHGF
                     LNDPSEKALNAYMRKVINNKTRPTILLNVSALEAGDASYMLEILKKWHKRVMIKALSK
                     SCTVDPKISYDELVEWYNEVM"
     gene            6675..7208
                     /locus_tag="PXD18_000013"
     CDS             6675..7208
                     /locus_tag="PXD18_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300491.1"
                     /translation="MKLCRCPICHSDIHLEALVEDEAGRELLGKISQLTHGVAQPMVA
                     YLGLFKPQKSNLNNSRALKILNDVLALYPCSLLLAQALSETVVSIRKKRQQAMENGQK
                     IEPLPNHNYLKSVYETQKVHFAVVRTGKTERETMKAELEKTRNAIAYVQRFVDLGREE
                     VVKNSPEYQIWLAHKPK"
     gene            7373..7732
                     /locus_tag="PXD18_000014"
     CDS             7373..7732
                     /locus_tag="PXD18_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6300492.1"
                     /translation="MELVDIFEEKAPEVLTDLAKHIEVALEEKCQFSPEKAKQIGIDI
                     AQQMAQNWGGEVIYIPRNLLMALNERDMKIYEEFNGNNHRELARKYNVSMQWVYKIVK
                     KVHKDEVARRQMSMFEM"
     gene            7868..8377
                     /locus_tag="PXD18_000015"
     CDS             7868..8377
                     /locus_tag="PXD18_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HDL6300493.1"
                     /translation="MSQNLTFRQIFDRLIGHEGGYVNHPQDPGGETHWGITKRTAVAN
                     GYMYAMKNMTREQAYQIYEKAFWQRYRCAELKPAVAYQFFDAVVNHGFGNASRMLQRA
                     VGVADDGIIGNITLQAINAKSESDLLMLFNAERLKFYTKLRNFPTFGKGWVNRVAGNL
                     EYAAQDNEV"
     gene            8380..8649
                     /locus_tag="PXD18_000016"
     CDS             8380..8649
                     /locus_tag="PXD18_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2644 domain-containing protein"
                     /protein_id="HDL6300494.1"
                     /translation="MAKLFKELLSTNGTLSTTSTVQFFGTLCVFGLMVYAVITQQPYA
                     ESLLNNVLIYLFGATTAKGVVTSYQAKIKGGIHKQQSTFKEEEGC"
     gene            8643..8990
                     /locus_tag="PXD18_000017"
     CDS             8643..8990
                     /locus_tag="PXD18_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2681 domain-containing protein"
                     /protein_id="HDL6300495.1"
                     /translation="MLMQQILGVIGVIAAILSYALFKSWQLKRERKKNAILQAEKQQQ
                     AVEIEQKKAEVKYVYISKKNNEKVTRSSASDIDDKLQQHGYFRDNNRLHGVQSDLSEP
                     CGYAGNETSDSCS"
     gene            9017..9169
                     /locus_tag="PXD18_000018"
     CDS             9017..9169
                     /locus_tag="PXD18_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300496.1"
                     /translation="MKYIKKLRKRWQIWRFLKNHPEVAQRRDLLAIAIKQGVENPVGR
                     ARRREP"
     gene            9169..9504
                     /locus_tag="PXD18_000019"
     CDS             9169..9504
                     /locus_tag="PXD18_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2730 domain-containing protein"
                     /protein_id="HDL6300497.1"
                     /translation="MDLFTVFWESIRANFGFISALLTIVVTAFWLKLDSKYAKKNDLG
                     ELLEIAKSHDNRLTTLETKVENLPSAVDVEKLKTLVTDVKGDTKATSKQVDSISHQLG
                     LLLEAKLKE"
     gene            9506..9802
                     /locus_tag="PXD18_000020"
     CDS             9506..9802
                     /locus_tag="PXD18_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300498.1"
                     /translation="MSLRDLLTQDQRLVILRSLAEAGYDANESIISDCLDLYGHDISR
                     DLVRTHLSWLEEQGLLTLERLRDGYMVASITQRGLDVAQGRVVVSGVKRPRPKI"
     gene            9825..10397
                     /locus_tag="PXD18_000021"
     CDS             9825..10397
                     /locus_tag="PXD18_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3486 family protein"
                     /protein_id="HDL6300499.1"
                     /translation="MSEKNTRGRASKVDLLPPNIKTQLAMMLRDKQYSQSQILEEIND
                     LIRDCGLPDEMLLSKTGLNRYASRMERLGAKIRNAREVAEIWTKQFGEMPQTDIGKTL
                     MEMVKQIAFETSLKLGEQEGGIEPKQLALLSSAIQRLEQAESLSFKREQAIRKEVAQQ
                     AAETAEKVVVQAGLSAETVRTIKEQILGIA"
     gene            10397..11953
                     /locus_tag="PXD18_000022"
     CDS             10397..11953
                     /locus_tag="PXD18_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase family protein"
                     /protein_id="HDL6300500.1"
                     /translation="MALLNNRPLNELAPECRSFLESIHAFNPNELLLGYQKRWIADDS
                     QLKIAEKTRRCGLTWAEAADNALIASTRKSDGGSDVFYIGSNKEMAREYIDAVAMWAK
                     AFNRVAGEIQEEIFEDEDKDILTYVIYFSSGFKVKALSSNPKNLRGMQGVVVIDEAAF
                     HEYLAEVLKAALALTMWGAKVRIISTHNGSENLFNELITDSRAGRKRYSVHTITIEDA
                     CRDGLYQRICQVVTKKTWSPEAEKEWIENLLNDTASEEDALEEYFCVPKFGSGLWLSR
                     ALIERQMSEATPVIRFTAKDGFSLVAEPTRYAEIAEWCELELEPILATLNPDLLHFMG
                     EDFARSGDMTSLVVLAQQQNLVRKVAFIVELGNMPYKQQEQIVMFMLKRLPHFAGGAF
                     DARGNGGYLAEAARDEFSTLIDCVQLSEKWYREHTAPFKAALEDGELEAIPKDADILA
                     DLRSFQVVKGVPRIPDKRTKSADGKSKRHGDTAISLLLAHYASRQLVQMPVEPVSRRP
                     RHSQQLTEGY"
     gene            12072..13526
                     /locus_tag="PXD18_000023"
     CDS             12072..13526
                     /locus_tag="PXD18_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 family protein"
                     /protein_id="HDL6300501.1"
                     /translation="MAKKNNLISEIATRARSIDYWAFGYYLPNPDPILKRMGKDISVY
                     RELLSDGQVRSGVRRRKAAIKGLEWRITTTNNEKVDEQIYQIFNRLPMNNLITEMLNA
                     ALYGYHISEVIWAKEGELFVPTEIIGKKPEWFMFDDENLLRFRTKENWADGELLPDDK
                     FLLTTQEATQDNPYGLGDLSLCFWAATFKKGGFKYWLEFTEKYGSPWLIGKHPRQAHN
                     TDKERLADALEGMISSAIAVIPEDSSVEIKDAAGKSASTDAFEKFLNFCKAEINIALL
                     GQNQTTEQESNRASAQVGLEVMEDIRSDDQAMIEATFNTLLQWIVKYNFNVEQLPKFE
                     FYEQEAINTDQVERDSKLHAMGVRFSKAYFEREYGFEAGDIEVQAVEKAEKSANTTEF
                     SEGQRRTQVPMPVPILEQLEHEGEAMVDDWLQGVRDKLAQADSLEDFQSQLDSLIPEL
                     SFAEYGELLALGSTVAELAGRQSVNDEIKAKRNA"
     gene            13519..14796
                     /locus_tag="PXD18_000024"
     CDS             13519..14796
                     /locus_tag="PXD18_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HDL6300502.1"
                     /translation="MRKFTFKQQAQYFEKKLNLRTNSYLDILGEEHDYFFVVAGANRN
                     EVLSEFRKAVDEAIHNGETLENFRKRFDEVVAKTGWEYNGGRNWRTRIIYDTNVYGAY
                     NRGRLQQHLELAEDMPYWEYQHNDNAHPRPQHVAWDGLVLRYDDPFWKYHYPIKAYGC
                     HCTVQALDDFDLKHDGKTVSPPPEIEFEQKTVGVRTGNSRVVTVPKGVDVGFTPHNFD
                     NLKAGRAANVDKLLMQKMVTADPIFASKAVSDLLAKEPVAKLHNQAFKNWVNDVANAK
                     GSALSQVENMQLLGVLPVAVIERLQQINLAPQSAIIAITKGDMVHALRELKQNTGIAV
                     PLEFWEKLPAKLQYPNAILLEKQQAETTLLFIYDVAQTKIAVKVNYDATLQDRHGAKG
                     RQKVLLNRAVTGSLFQDTTGLKSSKYEVLLGEM"
     gene            complement(14998..15342)
                     /locus_tag="PXD18_000025"
     CDS             complement(14998..15342)
                     /locus_tag="PXD18_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300503.1"
                     /translation="MMVNAEQAIELVYDLLLSRQWLVTKAEKLPLDPLSEKEAVMFLY
                     TLDQQTEASWLQLTPEQRATANGLIMDFIAKCLTSTKQWLVSDNIVPELQAIEIIKHE
                     IFLSHNSLVMPN"
     gene            15406..15870
                     /locus_tag="PXD18_000026"
     CDS             15406..15870
                     /locus_tag="PXD18_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDL6300504.1"
                     /translation="MIKITLNNTQAVKSLQQIANQLEQPRRLYGILGETLKKIHTARF
                     KAEQDPDGNNWKPLASSTLALKRKRGKSTKILRQDGYLADKTAYNVTSDNVEFGSQEV
                     YARLHQFGGKAGRGKKVTVPARPWLGVGDKDEQLLLRKAEWHLGQIIGRMGK"
     gene            16105..17220
                     /locus_tag="PXD18_000027"
     CDS             16105..17220
                     /locus_tag="PXD18_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HDL6300505.1"
                     /translation="MTQIEIFKAGKRYDANGTLIDITPEMLQQTVAAYNPEFHEAPLV
                     IGHPKSNNPAWGWVKALSLEGDVLKAEVDQLDAEFSEMVASGKFKKVSAAFYLPDSPN
                     NPHKGVLSLRHVGFLGAMPPAVKGLKQVEFAEDDDFVVFSEWGVASLFSRFRDWLVSE
                     FGLEKADKALPPHEIDWLKEEAMRSQISKQVHAEQATPEPIFNEPAQPEGEPEMSAEE
                     KEELERLKAENEQLKAEKAQAEAEKMEAELEAEKAGNAEFCEGLVKQGKLAPVAKAAF
                     VQALNNLSVLKAGREPEFNEGEDVVSQFKSAMSQSPQIIQFGEYATADKANPQEAEAV
                     EYAEGTDPVSIEADQKVRAYMKAHNVGYAAAFNAIYR"
     gene            17251..18177
                     /locus_tag="PXD18_000028"
     CDS             17251..18177
                     /locus_tag="PXD18_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HDL6300506.1"
                     /translation="MTTHNLQKLRVQDPVLTELAQGYHNNELVAETLMPTVEIEKEAG
                     KIPTFGRLAFRLPSTVRNLRGSSNRLDPEDIGAIDVALEEHDVEYAIDYREENEAIFS
                     LRQFALNTTQDVIALGREKAVATLALDESRYETDNKVTLSGTSQFSHKDADVFKVFDT
                     AIRAVKRAIGRKPNVCVISGDVWAALKEHPAVVEKLKYSQVAIVTPEVFAKLIGIETV
                     KIGEAVYEESGQLKDIWSKDIVVAYVAPRSTGGKGTVYEPSYGYTVRRQKGLFVDTYK
                     ESGGKIEVVRTTDIHKPHLVGAAAGYLIKAAV"
     gene            18246..18527
                     /locus_tag="PXD18_000029"
     CDS             18246..18527
                     /locus_tag="PXD18_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300507.1"
                     /translation="MAKFIVLHTPILHDGKRYEVGAEIELTAEQAENNAINLKAVEAV
                     PKPPKNASKPEDEPKPEGEPKPEDAVTEDDVKLAEAKIAEAEQPKGNKK"
     gene            18527..18961
                     /locus_tag="PXD18_000030"
     CDS             18527..18961
                     /locus_tag="PXD18_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 domain-containing protein"
                     /protein_id="HDL6300508.1"
                     /translation="MYVQIDELLTAFSRKIVVQLSNDEPTATEPDLKMLETAVKVANE
                     RIDAALRSRYTLPLADVPTLINQHALTLARYWLYARRPETKMPDTVKETYQQAVKELE
                     QIATGKLHLGIAESSQILEDDVLADNSEYEVRANARIDTSRY"
     gene            18967..19464
                     /locus_tag="PXD18_000031"
     CDS             18967..19464
                     /locus_tag="PXD18_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gp37 family protein"
                     /protein_id="HDL6300509.1"
                     /translation="MSATQPILEDICQHLRQALPEWEVELFPNDPSTYHLSHINGAVL
                     ISYLASKFEKPRTTQAVLQVRHVQIALTVLTRDLHNDVGALDLLDKLRLLVVGFKPQN
                     CGECWLIDEFFNGSSEETGLWQYQLILQTETQQVQHQAVENLPKFVTAHLRRQDQPGS
                     PGLKT"
     gene            19549..20934
                     /locus_tag="PXD18_000032"
     CDS             19549..20934
                     /locus_tag="PXD18_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HDL6300510.1"
                     /translation="MTFHHGSETERVNGGSVPVSVVDSAIIGIVGTAPIGAVNELTVC
                     LTKKDFAKFGTILNQGFTLPDAFDILARYAAGKVYVVNVLDPSRHRTTVTDEVLTLDR
                     NTLTAQTAKTGIIAVTRVKDGANVLNADRYSVDLQTGVVTFVSAPSAPKISYIYADPS
                     KVTEEDIKGGVDSLTGKRKGFELLRDGFNLYGADAKILICPEFDKTASCAAALATLAD
                     QLHAKAYIQLPKGTSLSKAIQGRGPAGTINASASNENVRHFFPYALGSSNTLESLATH
                     AAGLRMLIDVEKGYWFSTSNKELKGVIGLEIPLTARVDDKQSETNLLNAVGITTIFNS
                     FGTGFRLWGNRSSNFPTVTHISNFEVASRTGDIIDESIRQAELQFIDLPIDDALLDSF
                     LETIDTFLRTQKSLVGYSVSLDYEYDLVDAFSRGQVPIVYEYTPKIPGERISNKSVMT
                     RKYLANLVSQR"
     gene            20945..21460
                     /locus_tag="PXD18_000033"
     CDS             20945..21460
                     /locus_tag="PXD18_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HDL6300511.1"
                     /translation="MSIAINQIVNGNVYINGNSQMGRVNEVKIPDIEFEFIEHKGLGM
                     HGVIKLPAGTNAIEAEITWDSFYPEVRAVMLNPYKYTQLQIRSNLQVFNSQGLAAEEP
                     MVTIMNVSAGKIGGTGHKNKENAEFADTLNVHSIKQTVAGRELLFIDVLANIYRVNGV
                     DVLQKFRTNIG"
     gene            21556..21870
                     /locus_tag="PXD18_000034"
     CDS             21556..21870
                     /locus_tag="PXD18_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HDL6300512.1"
                     /translation="MANAAQQVLTNLRVQTTYKLQYPIALPDGRVIETLDVRRPKGKD
                     FRLLDEKGFDPEKDGVKILRFYIQQLTTLVPEDIDELDAADIKGLNNLLEDMLIEGKS
                     DK"
     gene            21867..22019
                     /locus_tag="PXD18_000035"
     CDS             21867..22019
                     /locus_tag="PXD18_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005658873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HDL6300513.1"
                     /translation="MSELDTVYADLAWWFKFSPSELLELDLVDIPKWVEQMNRQIKAG
                     YGQILR"
     gene            complement(21998..22300)
                     /locus_tag="PXD18_000036"
     CDS             complement(21998..22300)
                     /locus_tag="PXD18_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300514.1"
                     /translation="MLTKLNNRITEWAGFEACVTRTECTAKWLLAVALVGWSIFYWLD
                     AIQSIQSLSEGVSFVLIYGLILTILAWVGVYLAWGVAILLTLATEPFIWLYRKICP"
     gene            22348..25005
                     /locus_tag="PXD18_000037"
     CDS             22348..25005
                     /locus_tag="PXD18_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL6300515.1"
                     /translation="MANNLAIGMVIGASLSSGFHGAFSGAKKKLEQLEQAVAKNQQSH
                     SKLGSELTALRSKQATLYAEMSRASSKGGAGLALMQQEYKKIGKEIANISREQRKWST
                     ELEKSIAKQTKLRNAMERHTQAKENRDELKGKIIGTVASAAMGVGVMKTYMEQEEAAN
                     NLKISMLKADGSFGKFEEIGKIADTLGTDLPGTKKDFYKLAMALKKQGVSDDVLTGGA
                     LKTSAELNVLLDMDQESGGEFLAKFMESHRLNENELPQAADYLQRAMFAGGLSKEQMY
                     ESMKYYAPKLNSMKLTGAENTEKVLAIEAMAGQQGLEGSTFGTGLNMMLSRMNKGPEM
                     LKAAAKGMKAEAREMMEAVGVEFNFWDKNGSFKGIDGMLAEMTKFEKIRKKFGDKGVG
                     LVAEELFGIEGGRLADILAMKGQKGLDEMLSKMREQASLQDRINLKTNTLGAALESLG
                     GAWETFVGDIGSVFAEDIKGFSKGLQSAVEWLVPFVSKHKEAIKFVGGLVAGLVILRG
                     VLQAGSFVIQTVTMAMNALKIAAMTNPIVLVIGAIAAGAYLIYSHWDSIAPWFANLWQ
                     NVTAYFNQFWTWVKGVWSGVTDWVSSVWNGVATFFGQLWTTITSLFSVAWTNIQTIWG
                     GATAWFSGLWDGIKSAAFGMFDSISQKVSSVVASIKSFLGFGDDVDKMGAKIGNVATQ
                     VISKEHSGQLSKTADMAANTGFSSGGFTGQGGKYTPAGIVHKGEYVMTKEATSRLGVG
                     MLDSLNYGGAMGFTQPVLQPILGKQKGFFGSLWDDVKFGANFVGNLLGLNQGSLKTPD
                     FNPNATNASGQNSSIFSNYEPLNRNAVTQQESSQAPQIVVNFNPTINVNGNATQEAQS
                     QIMQQLQMSAYEFEKLLNRVLDQRSRRAY"
     gene            25015..25938
                     /locus_tag="PXD18_000038"
     CDS             25015..25938
                     /locus_tag="PXD18_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6300516.1"
                     /translation="MYFMLGNIAFEPVNLTEFSEQHTAEFAEHAVLKGKPRLQAMGEK
                     LNELNFSLRLHHTIGGVESRYQALLEAKAKQAALALIWGSRYKGDYVIVDISSTTLFT
                     DGRGNALAREMQISLKEFVGDNDGGVLGEALNFGGGSLLGSILPSGAVTTLSQIKTAV
                     SRGVELYNSGKRLVDEVQNTVAIIRQLKNDPATALAYLPAALANLDGALGHFGNLTGS
                     SATLGGLQEKLPAAVVFSEEIGEIYQSLQTMRSSLGNASANSWDNWFTPAESALTEVT
                     DSFDHLAKPVAKMTAWIVLRTDEEAENDTVA"
     gene            25922..26149
                     /locus_tag="PXD18_000039"
     CDS             25922..26149
                     /locus_tag="PXD18_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HDL6300517.1"
                     /translation="MTQLLKHIVKQGERWDNLSYQYYGNAFEYGRIIDANPHIGFCEV
                     LPIGVTIYIPVLNVKPTNNENMPPWLRGRDA"
     gene            26142..27206
                     /locus_tag="PXD18_000040"
     CDS             26142..27206
                     /locus_tag="PXD18_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300518.1"
                     /translation="MRNVPKPDFSLFYEKTNITAEIEPHLVQLTYIDHLEGQSDELTV
                     EFEDIQGKWIRQWFPTQGDKLKAAIGYQGEFLTDIGEFEIDEVEYSYKPSTINLKALS
                     TGISKANRTLKPKAYENTTLAQVVAKVADNLKLKVVGKIKAIPIKRITQYQERDVEFL
                     ARLAREYHHSFKIVGNQLVFTDKSELGQSEPVLMLEERDTISLRLRDRIKDTAKAVEI
                     SGYDTSGKKVVKKRKKAKALRPNIKQAKSASEDTLKIITRGESQEQIDARGEAALATQ
                     NEDQAAGDIELIGNPKLVAGATILLRNFGVFSGKYLIKSSRHTISRSGGYTTHIEVRM
                     LEFIADDLITLGMEAGNANA"
     gene            27193..27729
                     /locus_tag="PXD18_000041"
     CDS             27193..27729
                     /locus_tag="PXD18_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDL6300519.1"
                     /translation="MQTHNFGATYQEGIVSAVDPKTHKVRCKIPALEDLETAWLSFLT
                     PNAGGNQFYCLPDVGELVAMLLDAQGEGGCVFGAIYNEQDPTPVADSDMWVKKFSNGT
                     EISHNRKTGDVVVKTNGHLTATAQGGATINANTVVNGTLHATGKITSDEEVSAPVVKQ
                     GTVELGTHKHGGSPEPNK"
     gene            27784..28146
                     /locus_tag="PXD18_000042"
     CDS             27784..28146
                     /locus_tag="PXD18_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HDL6300520.1"
                     /translation="MNRQTSIQLTHWQLAPSTDTVEVVQGIDDIHLCIVNILSTQKGT
                     DILRPEFGSDHFRYIDYPEDVAIPNFVREITTALQKWEKRIEVEEVLVDGSAPHFIFT
                     VMWHLTDDVYREIYRTTV"
     gene            28156..29259
                     /locus_tag="PXD18_000043"
     CDS             28156..29259
                     /locus_tag="PXD18_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HDL6300521.1"
                     /translation="MTEAIKIIDDDVKTVLAEAIADYEKRTGKILQPAHIERSIIQTY
                     AYREQLLRKGINHAFLQTFPQFATGIALDLCGETFGCYRLRDKPARTLLRFSVSGEHT
                     AIVIPKGTQVAINDELYFSTLNDDVITPLITYVEIDAECNQVGVIGNGWESGRVSKLK
                     TALATNYKVTVENIDITSGGLMQEEDEPYRKRILAAPEAFSNCGSIAAYDYHVRSVSQ
                     DIADVNISTPRGGLVRIAVLTQKGLPDTRLLDDIKKHVSAERLRPLCDMVEVIKPTER
                     RYQITARLILLDGYREDLVKAKAREALQLYLSDKTKKLGLDIVPSAIISALRVEGVYD
                     VNLIQPVKTIINETEWANCTAISVEVEEERRDG"
     gene            29252..29818
                     /locus_tag="PXD18_000044"
     CDS             29252..29818
                     /locus_tag="PXD18_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6300522.1"
                     /translation="MASLHYADIIVRDPKYKALADLSKRLNLLDTSQIMTTLVDLLGD
                     ECIPLLAEKWSVTGYDGLLVADSENSKRALIKRAIELHQLKGTPWSIREVLRRLGFGE
                     VEIDEGLKNRLYESTYVSGIPENERWAHYAIRLSNPITNEQARNIRKVLRNFAPARCS
                     LAVLDYKADPIRYNNKATYNGTYNHGSS"
     gene            29828..32107
                     /locus_tag="PXD18_000045"
     CDS             29828..32107
                     /locus_tag="PXD18_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HDL6300523.1"
                     /translation="MAGVQETAQWENHVYRIEENDPVHGGENGVTNKPIKHLANRTLY
                     LRRLLTEAGQRINPKKITATSKNSNDLTGHTHEIDHASLTQKGIVQLNASIQSTSTTE
                     SATPSAVKAAYDKAATAEQKATLANEKVEAIKVGGRNLLIQSNTPHNGNAYSVRYALA
                     EAPKVGEEIVVTLWGELGSQRTGIGVYNSQGATELAKLVKIRDGVYQGKGIWRKPMSE
                     GRERTPNDTHLNVYFYPKTATDNNRIERIQLERGSIGTDWTPNEADLKAEISAIRTKL
                     IPVRGGNVATTLNAAKRSDWFREMQIPYQSGWGYYTQAFHNSGTQHNYSNLPLTGRYY
                     FIAELYHNSGYSHLRITYPSLKRTFESAINLNNEDLILDWREVVFLKDGLYQGTFKTT
                     GTLESAYRLRAARDDERYQPYLQMVDMGYDLANPPVGKNKIIGSVDYYVKNGTSESSK
                     ATMMAAAMPDKNVFWEVALWNAAQQRNVLFKGYSKTNNLSIGKTTDNERDRVQVNGTI
                     QATAPADNANNDQVPTTAWVRKMAKILADGKVSKAGDTMTGHLFIKNGEYSAVHTYNT
                     SGWFAKWEAAPLSDSHFAAIVYANDRETVINRVLIPKKNGTVALINDIADTVRAAVSR
                     SDKSRSRTFPLQTGKKYTTTGSVTIYPDGRIVQIFHLKNIKAAWFDYEASAVGDRHRV
                     VNIPLWTAMPNKIFDVDVKTVRPSNNASTYYIEAAEWLSAWQIYGNDTNKSSVNINLS
                     RFRGGKDEDMDLYVTVEGY"
     gene            32108..32710
                     /locus_tag="PXD18_000046"
     CDS             32108..32710
                     /locus_tag="PXD18_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300524.1"
                     /translation="MAYFVNVIDEQGNYELIDDEFIGLYPDLDFNTLPKLTDKQYQTY
                     LAKANGKERFVNGEFVYEQIKVDMQAVISAEKSAKLAEINQKAQAFINDLAKYNETPK
                     FERDTWLEQAKEAKAWVADPTVQTPTLELIAQMRGIPLDTLRQKAYEKAMAYQTVAAI
                     VAGQRQGYEDRLEQAETLEQIQAIEPMYQLPQGANNEQTD"
     gene            32694..32969
                     /locus_tag="PXD18_000047"
     CDS             32694..32969
                     /locus_tag="PXD18_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300525.1"
                     /translation="MSKLTKLKSWSYHVLIAIDQLFNALTGGAADETFSSRCYRGAVL
                     AENPKKRWRFWHSFLNCLFLDPKHCYAAYKAEVHRKQYPKAFRLGGI"
     gene            32969..33256
                     /locus_tag="PXD18_000048"
     CDS             32969..33256
                     /locus_tag="PXD18_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300526.1"
                     /translation="MKKQNLKLVRGDDVSFRFSIKDSTGQPLALKDLWFDLHLVSYQG
                     EVLIALSTDDGSIETAEAGQMVLHFSHQQTARAEWTSANYDLQLTHDYTRV"
     gene            33266..33430
                     /locus_tag="PXD18_000049"
     CDS             33266..33430
                     /locus_tag="PXD18_000049"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300527.1"
                     /translation="MTSIIELDLTDDLIIEVQLDSTIITGDSFLANLPDLLQIYNQAK
                     SDSSKELNND"
     gene            33423..34127
                     /locus_tag="PXD18_000050"
     CDS             33423..34127
                     /locus_tag="PXD18_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300528.1"
                     /translation="MTKHKNHENHPIAITFYQLGKDVGDINRRLAVIEQREQSAQPSQ
                     PQAEAVTMPQQDAVAINNINAVLEAVEKYKTFEKYNTQWQERFEKFLSRNPNDYELSE
                     EQRQKLYHTMCQHLWQVNFTEINSKQYELPIPQQFQGKFGYIVKTSGGSTEISFELLS
                     ETHSTYLYPDSYIPEGGGDVMLKPAYIYLVIPDLVAMREPEVVGVSPLKLNILQKHLL
                     TPQKLQEQKPLNTKAN"
     gene            34358..34426
                     /locus_tag="PXD18_000051"
                     /pseudo
     CDS             34358..34426
                     /locus_tag="PXD18_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011272064.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
     gene            34436..35275
                     /locus_tag="PXD18_000052"
     CDS             34436..35275
                     /locus_tag="PXD18_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300529.1"
                     /translation="MEKVFKQAPLPFSGQKRMFLSHFKQVLNANIEADGKDWTIIDVF
                     GGSGLLAHTAKREKPLARVIYNDFDNYAERLNHIKETNQLRQEIYQIVDEIIPKNKRI
                     SNEIKAKIINKINDFEGFKDLKCLSSWLLFSGEQVATLDELFKHDFWHCVRQSDYPEA
                     TGYLDDIEVVSESFHQLLPRFHDKEKVLLILDPPYLCTRQESYKQENYFDLIDFLRLI
                     DLTKPPYIFFSSTKSEFIRFIHYMVQNRKENWQAFEGAERIVVNASASYNGKYEDNMV
                     YKF"
     gene            complement(35312..37750)
                     /locus_tag="PXD18_000053"
     CDS             complement(35312..37750)
                     /locus_tag="PXD18_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S6 family igA-specific metalloendopeptidase"
                     /protein_id="HDL6300530.1"
                     /translation="MKHTFKLSLLATSIAISLSPTLLASIVRGDVDYQYFRDLAENKG
                     KFFVGATNIPVIDKTGKNIGTFLQVTPTKQVEVESNISPKPNVSLSECFDNESLPGCY
                     EFLYGGGDEDSNDLPVFETVTGETMSIPMIDFSSITRQTGIATLVNPQYVISVNHNQG
                     YRDIQFGDSSSEKADDHHYNYSVVRRNNYMPDPNKERTDLGKGIEKRERNDEGEKLIL
                     DGSGNPTPRWDYHAPRLSKLVTEVAPANEIERTTENVQDFYSVFSDPFIFPMFIRAGS
                     GRQAVVNNERDRLNNGRIEVGNGPFLTGGSVLPVTNGDPSVPGSDFNSRILVAKTENN
                     TINDVFKDHGYGPLTTLGLPGDSGSALFGYDVRTKKWVVLGVYSDYFSENNTLGGDVY
                     KSYWNYHHPHYVRALEKENNAGAINANGARLTWTPSGNTSSIVGGNAPLTVNLADTSL
                     PTLQGHNGNTGDNPWNPQLQHGKTFHILGENNTLSLTENINQGAGAIHFHGNTTVEGM
                     KAGITWLGAGVDIDKDKNVIWKISNPAGDRLSKIGQGTLTINGKGENKGSVSVGDGTV
                     ILNQQADENNKKSAFSELGIVSGRPTVILNSSDQMDPNNIYFGYRGGRLDVNGNDLTF
                     RRIQNSDEGAMVVNHNTAQTANITLTGIVSPTIDQVKVQAITSPDQVSRHLDKDIFTY
                     QRFPHLPTNFIRLKKPLSVAEITAIFNARKVFIDLDFATGLIRENEYFEVLKVTDESA
                     AKQQILAEKIKAAEGTVQGFNGYFGETDPSKTNGRLNITMNSNCSEPTKLRNATTKTT
                     KENRSFTFLILMVF"
     gene            complement(38070..39836)
                     /gene="aspS"
                     /locus_tag="PXD18_000054"
     CDS             complement(38070..39836)
                     /gene="aspS"
                     /locus_tag="PXD18_000054"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HDL6300531.1"
                     /translation="MMRSHYCGALNRSHLGQTVTLSGWVHRVRNLGRFIFMQIRDREG
                     IVQVFFDEKDEALFKQASALRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNLVV
                     YNNAEVLPLDFNQNNTEEQRLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDNGFLD
                     IETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFR
                     DEDLRADRQPEFTQIDVETSFMTAEEVRALMEAMIHGLWKETLGVDLGKFPMMTWNEA
                     MTRFGSDKPDLRNPLEMVDVADILKSVDFKVFSGPANDPKGRVVALRVPNGAALTRKN
                     IDDYTQFVGIYGAKGLAWLKVNDMNTGLEGIQSPVAKFLNEEVLKALVKRLNLQKDDI
                     VFFGADNWHVATNAIGALRLKVGNDLGLTDTTAWKPLWVIDFPMFERDDEGNLSAMHH
                     PFTSPKELSPEELVQDPENAVANAYDMVINGYEVGGGSVRIFSQQMQQTVFSILGINE
                     EEQKEKFGFLLDALKFGTPPHAGLAFGLDRLTMLITGTDNIRDVIAFPKTTAAACLMT
                     EAPSYANPKALEELAIRTIPQE"
     gene            complement(39942..40853)
                     /locus_tag="PXD18_000055"
     CDS             complement(39942..40853)
                     /locus_tag="PXD18_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HDL6300532.1"
                     /translation="MLYGLAIVLIPLFLGYLITLKNHRHMAIVNRVVSLCLYLILLVM
                     GISLGQIDNILTELPQIGGTAFSLVVILLLSNIIGLVIYDKLQPMKRDKVNQDQLPSR
                     LHLLIDSFKLIGITLLGGIIGYFTKGVVDFPLHASTYVLEVMIFGVGIQLRNSGIPLR
                     EVFFNKRGIYTSIVMVASSLIGGVISAFTLDLSLAKGLTFASAFGWYSLSSVLVNDAW
                     GPIYGSIAFFNDISREILCLFLVPLFMRQFPSTAVGIGGATSLDCMLPIIQKSGGIQI
                     VPLAISFGFIVNLAAPLLLAVFIGLEG"
     gene            40976..42058
                     /gene="dinB"
                     /locus_tag="PXD18_000056"
     CDS             40976..42058
                     /gene="dinB"
                     /locus_tag="PXD18_000056"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HDL6300533.1"
                     /translation="MSIQAKHKRKIIHIDMDCFYAAVEMRENPALVGKPVAVGGNANQ
                     RGVLTTCNYEARKFGLHSAMPTATALKKCPNLILLPVNMALYKSVSAQIHEIFHRYTD
                     VIEALSLDEAYLDVTECERYFGSATWIAQAIRNDIFNELHLTASAGVAPLKFLAKITS
                     DQNKPNGQCVITPDDVQNFVKNLPLAKIPGVGKVTNEKLKQLGFETCGDIQQAEKAVI
                     YRAFGKFGQRLWDFSHGIDERAVEPYRERKSLAVENTLLHDISTLEQAEKIVADLFDK
                     LVFRLQRNWGDTPLTEFKKLGIKLKFDDFSQTTLERTTDGFAYERFGELLQQIFTRRK
                     ERKVRLIGLSVHFPEKKVNKQLNLWE"
     gene            42146..43015
                     /gene="htpX"
                     /locus_tag="PXD18_000057"
     CDS             42146..43015
                     /gene="htpX"
                     /locus_tag="PXD18_000057"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HDL6300534.1"
                     /translation="MAKRVILFLLTNLAITFVLGIVLNLIFKVTGIQGQSTAGILVLS
                     LVFGFSGSLISLFMSKSMALRSVGAEVITQPRNEAEQWLFNTVQRQAQQANIPMPDIA
                     IYHSADVNAFATGATKSNSLVAVSTGLLNSMTKDEAEAVVAHEVAHIANGDMVTMTLL
                     QGVLNTFVIFLARIISTMAASSRDENGNSSTNTLVFWVVDIVLQMVFGVLATMIAMWF
                     SRQREFRADAGSAQLVGKEKMIAALQRLQRVHEPQEMEGSLAAFMINGSRGKELFMSH
                     PPLEKRIEALRNL"
     gene            complement(43069..43563)
                     /locus_tag="PXD18_000058"
     CDS             complement(43069..43563)
                     /locus_tag="PXD18_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDL6300535.1"
                     /translation="MTEYLTSFFSLFFSEQNQLFTMFLSGFLSATLLPGNSEIIFTTL
                     ASQHLITYGSLSSFSLFNLLLVATLGNSLGSITTYAIGLLLPRPQNTTNRYSQWALAK
                     SEKYGVLVLLFSWLPIVGDIFCGIAGWLRFSLWQSILFIVIGKLLRYLFLLATLYSVL
                     PHIL"
     gene            43764..44588
                     /gene="focA"
                     /locus_tag="PXD18_000059"
     CDS             43764..44588
                     /gene="focA"
                     /locus_tag="PXD18_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter FocA"
                     /protein_id="HDL6300536.1"
                     /translation="MFSPAEMAKIAEDGAVYKATKNQLYSFLSAITAGGFIAIAFVFY
                     TTTQVGASQMPWGMAKLIGGLVFSLGVIMCVVFGAELFTSSTLTIVARASQRINWLQM
                     FKNWVVVYFGNFVGAISIVLLIWFSGQIMAAKGQWGLVILNTAQHKIHHQWFEAFCLG
                     IFCNIMVCIAVWMSYAGKSLTDKAFIMMLPIAMFVASGFEHCVANMFMIPMGIAISHF
                     ASPEFWTAINVDPTQFADLDVSHFVFKNLIPATLGNIVGGVFFIGLMQWFLYIRKH"
     gene            44678..47002
                     /gene="pflB"
                     /locus_tag="PXD18_000060"
     CDS             44678..47002
                     /gene="pflB"
                     /locus_tag="PXD18_000060"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HDL6300537.1"
                     /translation="MTQLTDAQQKAWEGFAAGEWQTEVNVRDFIQKNYTPYEGDESFL
                     AEVTPATSKLWADVMEMIKVENKTHEPYDIDCDTPSTITSHAPGYIDKSLEKIVGLQT
                     DAPLKRAIMPFGGINMVKGSCKVYRRELKPEVEQIFTEYRKTHNQGVFDVYTPDILRC
                     RKSGVITGLPDAYGRGRIIGDYRRMALYGADFLMKDKQRQFASLQARLESGEDIQATI
                     QLREEIAEQHRALGKMKEMAASYGFDISGPATNAQEAVQWTYFAYLAAVKSQNGAAMS
                     FGRVSSFLDIYIERDLKAGKITEQEAQELIDHLVMKLRMVRFLRTPEYDQLFSGDPMW
                     ATETLAGMGLDGRTLVTKNSFRILHTLYTMGPSPEPNLTILWSEQLPEAFKRYCAKVS
                     IDTSSVQYENDDLMRPDFQNDDYAIACCVSPMIVGKMMQFFGARANLAKTLLYAINGG
                     VDEKSGDQVGPKTEAITSEYLDYDDVMTRLDSFMDWLATQYVTALNIIHFMHDKYAYE
                     AALMALHDRDVFRTMACGIAGLSVAADSLSAIKYAKVKPIRTDIEIKNKAGEVVGVAK
                     NVATDFEIEGEYPQFGNNDNRVDDIAVDLVERFMKKIQKLKTYRNATPTQSVLTITSN
                     VVYGKKTGNTPDGRRSGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTF
                     SIVPNALGKDYEAQKRNLAGLMDGYFHHEATVEGGQHLNVNVLNRDTLLDAVEHPEKY
                     PQLTIRVSGYAVRFNSLTKEQQMDVITRTFTESM"
     gene            47237..48262
                     /locus_tag="PXD18_000061"
     CDS             47237..48262
                     /locus_tag="PXD18_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HDL6300538.1"
                     /translation="MSKQDLIRSSVAEYLTFITATGESQVDAVYADENVWLSQKMMAV
                     LYDVDVRTISYHLKKIFSDNELAENSVIQFFWITAQDGKNYHTKHYNLSAIIAVGYKV
                     NSERAVQFRKWATEIVHSFAIKGFAMDDERLKNDGTILGKKYFEEQLARIREIRLSER
                     KFYQKITDIYATAVDYDRTATATKRFFATVQNKLHWAIHGHTAAELIMARANAEKPNM
                     GLTNWKDAPQGKIYPFDVVVAKNYLSDNELAQLQRLVSAYLDMAEDMAERQIPMTMAD
                     WETRLNRFLAATDREILQDAGKVTAEIAKSFALSEFEKYRVKQDLTYESDFDLLVKEV
                     AAKYHAG"
     gene            48511..49251
                     /gene="pflA"
                     /locus_tag="PXD18_000062"
     CDS             48511..49251
                     /gene="pflA"
                     /locus_tag="PXD18_000062"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase 1-activating protein"
                     /protein_id="HDL6300539.1"
                     /translation="MSVVGRIHSFESCGTVDGPGIRFILFLQGCLMRCKYCHNRDTWD
                     LDGGKEITVEELMKEVTTYKHFMKATGGGVTASGGEAVLQMEFVRDWFRACKAEGINT
                     CLDTNGFVRHYSPVVDEMLEVTDLVLLDLKQLNDEVHQDLVGVSNKRTLDFARYLHKL
                     NKPTWVRYVVVPGYTDDDDSAHRLGQFIQGMDNIEKVELLPYHRLGAHKWETLGYKYE
                     LEGVMSPPKEDLERIQKIIESYGHTVKF"
     gene            49382..51448
                     /gene="prlC"
                     /locus_tag="PXD18_000063"
     CDS             49382..51448
                     /gene="prlC"
                     /locus_tag="PXD18_000063"
                     /EC_number="3.4.24.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase A"
                     /protein_id="HDL6300540.1"
                     /translation="MSNPLLNYTGLPAFSQIKPEHIKPAVEAVIKECRETVEKVAQIE
                     NPTWENFYMPQAMAEDKFSRAWSPVGHLNAVKNSPELREAYQACLPLLSEYSTWAGQH
                     QGLYQGYVKLKNSPEFETYSVAQKKAIENSLQDFELSGISLPAEKQKRYGEISARLSE
                     LNSQFSNNVLDATMGWDIVITDEAQLKGLPESALEAAKLSAESKGKKGYRFTLEIPSY
                     LPVMTYCENKALREEMYRAYVTRASDQGPNAGKWDNSAVIDEILKLRHEKAQLLGFKT
                     YSDYSLATKMAENPQQVLDFLNDLAARSKAQGKNELCDLKKFAKAHFGIEHLDLWDIP
                     FYSEKQKQALYSVNDEELRPYFPENRVLSGLFEVIKRIFGMRVEEQKDVDVWHKDVRF
                     FNIFDKNDRLRGSFYLDLYARENKRGGAWMDDCINQKRLADGTLQKPVAYLTCNFNKP
                     IGDKPALFTHDEVTTLFHEFGHGIHHMLTEIDVGDVAGINGVPWDAVELPSQFLENWC
                     WEEEALAFISGHYETGEPLPKAKLEQLLAAKNFQAAMFVLRQLEFGLFDFRLHTEYDP
                     SKQGQVLALLKEVKDQVAVAKGVEWARTPHSFSHIFAGGYAAGYYSYLWAEVLSADAY
                     SRFEEEGIFNPETGQSFLDNILTRGGSEEPMVLFERFRGRKPTLDALLRHKGIVGNAE
                     PVDCTQ"
     gene            51570..52727
                     /locus_tag="PXD18_000064"
     CDS             51570..52727
                     /locus_tag="PXD18_000064"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HDL6300541.1"
                     /translation="MSLDLADIRTQITNLDRNLLKLLAERHRLAFDVVRSKEITQKPL
                     RDLEREKILLQELVNFAEAENYQLDPQYVTQIFQRIIEDSVLTQQNYLQNKLNAQKEE
                     QVSIAFLGMRGSYSNMASRQFAKKYQGTLAELSCHSFNEVFEKVSLGEADFGVLPLEN
                     TTSGSINEVYDLLQHTDLTLVGELAYPIKHCVLANGTVDLAEVDTIYTHPQPAQQCSQ
                     FLAGLDKVHIKYCESSSHAMQMVARLNKPNIVALGNEDGGKLYGLTNIKTDIANQAHN
                     ITRFIVVAKEAVQVSPQVQTKTLLLMTTTQQAGALVDALMVFKNHHIRMMKLESRPIY
                     GKPWEEMFYVELEANIHSENTQKALAELEQVTSYLKVLGCYPSEIIEPVKL"
     gene            complement(52786..53001)
                     /locus_tag="PXD18_000065"
     CDS             complement(52786..53001)
                     /locus_tag="PXD18_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HDL6300542.1"
                     /translation="MFPEFRDLITQLKQNNSHFARLFDKHNELDQRIKNMEANIELAT
                     HEEVEALKKEKLHLKDQLYAILKQESA"
     gene            53191..54006
                     /locus_tag="PXD18_000066"
     CDS             53191..54006
                     /locus_tag="PXD18_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HDL6300543.1"
                     /translation="MSYKVVFSLLFSLFLSTANANWTKINDVNYTWGPFNIYHITLFT
                     ESGTYVEGTRPLMLTLQYKKPWEGRDFAVSLARTWNNLGIKLPEKELDEVITHLRKTF
                     PDIKPEDTLHYIALEDRGYFILNDKVVSDVFNKAFNDAIVAIWLDPKMDISHQLLDPS
                     YKPRAEAESIKPQVEERVAENLQEPIVNTEVSKELKADSQAVEQAPNKIDIPVADKTQ
                     ASVVNEATQPVENKDKKEPEKLEEKPKEMKIENPEVFISPIYDDILMLTKYCV"
     gene            complement(54068..54712)
                     /gene="adk"
                     /locus_tag="PXD18_000067"
     CDS             complement(54068..54712)
                     /gene="adk"
                     /locus_tag="PXD18_000067"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HDL6300544.1"
                     /translation="MKVILLGAPGAGKGTQAQFIMNKFGIPQISTGDMFRAAIKESTE
                     LGKQAKALMDEGKLVPDELTVALVKDRIAQPDCANGFLLDGFPRTIPQADALKESGVK
                     IDLVLEFDVADEVIVERMSGRRVHQPSGRTYHVVYNPPKVEGKDDVTGEDLIIRQDDK
                     PETVLERLAIYHKQTKPLIAYYTAEAEAGNTRYERLDGTKPVEEVSAELAKILS"
     gene            complement(54824..56527)
                     /locus_tag="PXD18_000068"
     CDS             complement(54824..56527)
                     /locus_tag="PXD18_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDL6300545.1"
                     /translation="MLYDRVEVVRGATGLTTGAGDPSASVNLVRKRANSISRYTILEA
                     GIGRYADFNTMIDHSQALNNSGSVRGRFIAEHKNGNTFIKNEKERYTTLYGNIEADLT
                     DTTKLGLGVSYQKEKRDAALWGGLPAFYSDGGETNWSRSKNASPEWAYWDNESVNYFA
                     DITQKLGEKWELALKGNYRVGKHNSELFYFSGSSLNRQDGLGWSPWPGKFKNDNTQSN
                     VQLDLTGSFSAWGLEHDAAIGIQYNRAHRNSYAADNSTFDGAFDFNNWNGIYARPNWG
                     SMSEKYYQNLKEFGVYVSTRLHLTDRLSMLLGSRISSYRTEGTFYGSTQNFHANDVWT
                     PYAGLTFDINPQNTVYVSYTDIFKPQSQVDINNKLLSPVTGETYEAGWKGSYFNDNLQ
                     TQISVFETRQDNLAQSAGINPNTLLAYYTASKGAKVRGFEVEASGNVTEKLKLSAGYT
                     QWKGDDASGNPINTTQPRKQFKLFATYDMNRLVQGLTVGAGVNWQSRIYTKHATYGEY
                     GQKAYTLVNLMARYQFNDNFSAQLNIDNLFDKKYRNALSFSQYSYGEPFYTRLNLRYE
                     F"
     gene            complement(56562..56960)
                     /locus_tag="PXD18_000069"
     CDS             complement(56562..56960)
                     /locus_tag="PXD18_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDL6300546.1"
                     /translation="MNTLSKAIKLALYSSGIGFISTAYAETVTHLDTVEVSAETPNAS
                     SEETGRYAQKKAKGSNGMALSAKDTPQSVTAVTHQQIRDQNLNTIAKALEATHGVSVS
                     LLDRGRYSFSARGFGIDKVKVDGMDLKVSK"
     gene            complement(56988..58124)
                     /locus_tag="PXD18_000070"
     CDS             complement(56988..58124)
                     /locus_tag="PXD18_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL6300547.1"
                     /translation="MIAFLAGGFLLFFTNNLIGIVSRIYDTLLPVGAFTATLGAPLLI
                     FLVLRQRKAQFEASNTAYFPVKRLNSWKLPILLLCAGVILFCLLQIIAPTMNGWAISI
                     DENLMSSYRLPRSLSAIATGAMLAVSGSLLQILTRNPMASPEVLGVSSGATIAAVLSF
                     LLFPTLSSISFLLFGVLGSLTVLALIMWLSRKLQPSALMITGVAIGALVSGLMAIIQL
                     SGSPRLTAVISWLSGSTYYANPNTVWILLSVAILLISATLLFIKPLRLISLGETVSYH
                     LGLEVKKVQMIVLLLIALMSAASTLAVGPMSFIGLMTPHLAKNLGAITPEKQIPISAL
                     LGAMLMLIADWLGRYLIFPYEIGAGIIASILGGIYFLLLLKQHK"
     gene            complement(58121..58936)
                     /locus_tag="PXD18_000071"
     CDS             complement(58121..58936)
                     /locus_tag="PXD18_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDL6300548.1"
                     /translation="MKSSFLLIGCILLSLVTAVIRLNMVWEWEWQLLLINVDLLPINQ
                     AAVKAALLPEMTTSFLAGGLLAIASSGLQHIVRNNLASDSTLAVSSGAQLALMIAVIF
                     FPAAELFSSFWIALLGSLAAIVLVLFIAKASKLNPLTLILGGLIVNILFGAIASLLTL
                     FYFDFLFGVMVWGSGSLLQDGWATSITLAITVVVAFFIFVLLSRPLTILSLDDEQARR
                     LGAPVNLLRYLVIFVCAAITALVVSKIGVIGFIGFAVQVWLILPKYDIYYFAS"
     gene            complement(58936..59817)
                     /locus_tag="PXD18_000072"
     CDS             complement(58936..59817)
                     /locus_tag="PXD18_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6300549.1"
                     /translation="MMFRQYKRFIFLFILQISTAFAQPNIFTPDWSIASALTEMGNPP
                     IAMGDKRIYPLWSHRPIQPNSVLDIGARYQPNRELLAQLPVELVLSNFFYAHLASVYP
                     KEIPQIDVLFDGGNTEPQQHWHTYQKATRMIGTEIKNPNAAEAYLTKTEQTLAQWGKE
                     ILNSNPDIDYYSVVQFGSPRELRIYASNSMFRVAFDLMGLKQADLGVGDRWGNKLIPV
                     SDLAKLPERTCLIVISPFSKMTQADLENSYIWQRLGFGKNRCMKVLPPVWLFGGADSI
                     SHFAEFLHNAMTQGEKE"
     gene            complement(59814..60482)
                     /locus_tag="PXD18_000073"
     CDS             complement(59814..60482)
                     /locus_tag="PXD18_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6300550.1"
                     /translation="MAHNGSGKSTLMRLLSGDITPTSGSILVDGLPLHQLSTKEAAKH
                     IAYLPQRLPEAADFLVQELVALGRFPYQKWLQKPTEFDVQIVEQAMESTSVTQFAKQP
                     VNSLSGGEKQRVWLAMCLAQQTPYLLLDEPLAALDIVYQVEVMQLIRKLVNEQGLTVI
                     IIIHDINLASQFCDEIIALKQGELCIQGSVDEIMQEQKLLEIFGLKLHLFNHPAGLHK
                     VAVL"
BASE COUNT        18838 a        12018 c        13676 g        16222 t
ORIGIN      
        1 cgttctgtag ttaaatgatt tacatcattt aagtagtttc taaaactaac tttcaaggat
       61 ctcacaaaat ggcaagaaat aaaagagttc gagatatgag taatttcgaa attcgtggtg
      121 agctgatgaa aatcggtaag tccttatctc agttaggtat tgagaatgga ttagcaaaaa
      181 ccacagttcg taatgcgtta gataagccat atcccaaagg ggagcaaatt attgcaaaag
      241 cgattggtaa aacaccgcag gaaatttggc cctctcgtta cgaataagga gcttttatga
      301 aggaatggtt tttagccaaa gaaatcgcag gattatctgg agttccagaa ttaccgaata
      361 gcgtttcaag attggcaacc aaagaaggat ggcaaaaacg acaaattcaa ggtgtaagag
      421 gtgttactta cgaataccac ctcaccagcc tacccattga aacccaacaa caacttagac
      481 taaacgccgc ccttgcggta ataccgcaag cggcagaact acaacccaaa cgagacgacc
      541 ccgcacttat cgcaaggctc aataatgcca ccgataaagg cagggataaa gcaaaaggca
      601 aggcagaagc ctgtatgcag ttgcaagcct ttctcgacca agggtttagt tatacgcagg
      661 cagaagcggg agcggcaacc gctaaaaatg tgtcgcaagg ttctttaaaa aattggtact
      721 acaaagtgaa aggtcacccc gtccatttat ggcaggcgat cttaatttcc gaaagcggta
      781 ggagtaaaaa gccgcagctg aaagccaaga ttactgaaga agcgtgggac tgctttttgg
      841 cggattacct ccgccctgaa aagccggatt tacgggcaag ttaccgccga acccaagcca
      901 tcgccaagca atacggctgg caaatagcaa gtttacagac tttccaacgc cgagtgttgg
      961 cggaagtgcc ttacgaggtg attttgctca aacgggaagg agcaaatgcg gttgccaagt
     1021 tagtgccggc actacaacgc acggtgaaag atattctcgc aggagaatgg attaacggcg
     1081 atggctatca acacaatgtg tttgtgaaat ggcacaccgg cgagattgtc cgccctaaaa
     1141 cgtggttttg gcaagatgtt cgcacccgca agattttagg ttatcgaaca tcgatttcgg
     1201 agaatactga cagcatacgc cacgcattaa tggatgtgat ttttaacgta ggcataccga
     1261 aaacgctcac gctggataac acccgagcag cagcgaataa ggcaatgacc ggtggtattg
     1321 aaaaccgcta ccgctttaaa cataccgagt tagacccgaa aggcattatg ccgattttag
     1381 ggattgatgt gcattttacc tcaattcttt atggtgaagg acacgggcaa gccaagccga
     1441 ttgaacgtgc tttcgggcga ggcggaattg gcgagaaaat agataaacgc cctgaattaa
     1501 gtggtttcta tacgggcaga aatgcacaag aaacccctga taactataac ggcggtaaag
     1561 acggtgtgga ttacaacaca ttcttgaaag ccatagcagc agggatagaa gagtacaact
     1621 ctcaaaccga acgccatacc gaaatgtgcc gaggagaatt gagttttaac caagtttggg
     1681 agcgggatta ccacccaagc aacgtaagac aagccagccc tgaacagttg cggttactgt
     1741 tcttacaggc agaaacggtc agcattaaac gcaacggcag ttttacgctg aaagcagccg
     1801 gcaaacttta cggcttaact aacgtttact gggcagaaag cctgataggg ataacggata
     1861 agaaagtagt ggcacggttc gaccccgatg acttacacgg caacgtgtat gtgtacaacc
     1921 tagaggggca attcttagcc gaagcggttt gccgagaggc gaaaggattt ggtgatacca
     1981 gtgcaagccg tgagcaaggt cgcttatatc agaaagtagt gaaaagtgcc aaagctcaag
     2041 ccgaagccct tgaattactg gaagctcacg aactggcaag cctcgcccca caagtggacg
     2101 tgcctgagcc gatagagaag aaggtaaaag aggtgctggt gaaagaagat tttatcgtgg
     2161 atttcaacac tgtgcgtaaa gcaacggtgg tggaagaaac cgaagagatc agtatttttg
     2221 atgaagtgtt actgaaacaa gagaaacaac ttcgcatagt ggaataacta gcggtcagtt
     2281 tttgcaaaaa atttgcaaat ttttctaaaa aaacgaccgc ttgaaatgag atttaaacag
     2341 ggtttaaacg cctttaagga gtaaaaaatg acattaacag ggcaagctta ccgagtgatt
     2401 ttcaaggaac tcaaagagca acaagagagt gaatttgaac aggctttcaa gaaagggatt
     2461 gccaaaattc agcagaatca aactcaggaa tccattctgg taaaccgtga tatgtttcaa
     2521 gctgaaaagc taacactgct ttcacaaaag ttggaagcgg ttgagcaatt acttcgcctt
     2581 gaattaaatc agccgaattt tcaagcaaaa cttgaagact acgctgacgc attacgaaca
     2641 accattttaa gtaaagtagc caaataagag ctttagactc ttgaaggctt aacatctgag
     2701 ccactttttt tactgtcggc attataccgt caagatcatc aatagaagtt aaatgatgaa
     2761 aagaggaatg gtattcagct aaacaaaaat tgattgtact aagtttaaac aaagtaatgc
     2821 aatttttcat cacgatggca tttgctcgtt ttaacttaaa accagagaag gttgcacgag
     2881 cagaatcaag ggctatttga tgaatttcat catctgttaa agaacgaaag agcataaaaa
     2941 cctccaaaca aaaacaggac accattatga cattaatcga ccaaattaaa caacacatcg
     3001 ccgaaagcgg cagttctcag gggaaagttg ccaaagaagc cgggattaat gccggggcgt
     3061 tatcggctta cctgaatgaa aattacaaag gcaataatga agaacttgaa gcaaagctga
     3121 ttgcttattt agagcgtatt gaggcgaaga aaagagagtt tgtcgaagct ccgagtttta
     3181 ttgaaaccaa aaccgcaaac caaattttcg gttcgttacg atttgctcaa aatactggcg
     3241 tgcttgccat tattcacggt gcgagtggcg tgggtaaaac acaagcggct agagagtatc
     3301 gtaaacgcta tgcgaatgta tggttggtta ccgcaagccc ttctcgttcc tcattaagtg
     3361 aggtgttata tgaaattgct cttgaacttg gaatgaacga tgcaccacgc cgcaaaggga
     3421 cattggctcg tttaattgtt cgcaaaatga aaggcacagc aggtttatta attattgatg
     3481 aagcagacca tttaccttac gaagccttag aagaattaag gctgttacaa gaagaagtag
     3541 tgaatgaaag tgacatcgga gctggtgttg gcttagtgct gattggcaat gacaaagtct
     3601 acacccgaat gaaaggcgga attaaccctg ctcacgaata tgggcgactt tggtcacgca
     3661 gtgccaaacg caccagtatt cagaaaacca aaaaagaaga tacccaagcg gtagccaaag
     3721 cgtgggggtt gagtgaaaac caagaagcac tcaaggtaat gcaagccatt actgaaactg
     3781 gtggcggatt acggattctg acacacacct tacgattagc agcgatggta gcaaaagacc
     3841 gaatgattcc cttaactgcc gatttaattc agctcgcacg taaagattta ctctcaacag
     3901 gagattaaca atgagaaccc caaaacccaa acacagtttt aaccgcacca accaagcagc
     3961 gtgccgtttt ttaaaacaaa cccaaaaggc aattatccgc ttaaacagtc ttggctttac
     4021 ggtgctgaat attgatttta cccgtattaa gccccgcatt gaggtggaaa tcggcaataa
     4081 caagcacatt gctcaaggct tgatttatga gggtaaagcc taccgctaca gcttcggtaa
     4141 aagcgaagat ttaggcagat gggaaggcta ctacaccatg ctggaaggta tcagagtgtg
     4201 gtggcgacaa gcagcaattc actaggagaa aaacagatga aaaccttagc actattaacc
     4261 gcccttttag ggcttgtagg gtgtgattta gtccaaagca aacaagctaa aaattacatc
     4321 ggcaacaatt taactgaaat ctgtatagat aacgtggtgt acctgattta ttccggtgat
     4381 aaaaaaggcg gaattacccc gaaagtaaat aaagattttt acccttatac ctgtacaaac
     4441 aaagaggaaa gacaaaatgg caaaacccga tgaaacaccc attacaaaag cagaatgtca
     4501 atctcagctt gcagagttgg gggtgcaata taaaaaactg ccaatggcaa ttacaagaca
     4561 tatttgtaat gccacaacca atatacacgg caaagttata aaggtcagtg tggtagagag
     4621 agttggatat ggcgtccaga ttaccgcaca aggtaacgag aaatcttgct tagtaaccta
     4681 tgaagcaatg ttaggtatgg cagaagcaat gggattattt gatgaagtta aggagcaaaa
     4741 taatgactaa aaaaacaacc agagtaaaaa gtgcaaccca aagtgcgatt tatcaaagcc
     4801 gagatgaagt gcaagtggct ataaaaatca ttggtgataa acagcgtgaa ttgcaacgtt
     4861 tagctacggc aatgaatgat gaattagctg ctattagtgc cagttatgct caacataacc
     4921 gctaccaaca ttatgccgag aaagcggctg aagcagaacg caaaggcaac tataaggaag
     4981 ctcaagacca ttgggaagtt gcaaaattat cagcaaaaaa gaccgctaac cgagactggg
     5041 cggaacaacg agcggaattt tgtaaacgta tgcacaataa accgttttag ggggaagtga
     5101 tgacagaaac cgtaaaagca caacttaaca gccaattaaa tgaggcaatt atccagttga
     5161 tacaagctca aaagtattta aaccaagatg atgccattcg cagtggagtg tatatcggta
     5221 cggtgcagga tttattgcca aaggtgcatt taaagttatt aacggcaaat cgtaaacatt
     5281 gatagagatg aggtaaaaat ggctattaca gaagaacaat ggaaagaaat taagcaaaag
     5341 ctagatagta tcatagggag agttaaattt agatacaaag agcatttact cacggtagat
     5401 gttgtacaaa ttaagcgatc tttaaaattg gctgtgtatg ttgatgggga aattgatgga
     5461 gcttggacaa aagaaggaca cgaaattcgc ccttatttag aagaagtttg gtatcgcaaa
     5521 gaacgccctt tttttaatgc taaggagaag aaagagtata gaggtttaat gagcaaaaaa
     5581 aaactgaatg aaaaaatagt aacctactca cctatgtttc catcaccaac tgcactgact
     5641 cgtcaatata agaaactaga tggcttagag ttgattgaag tgatttaaaa cccatttaca
     5701 gcccatttaa ccccgagtta tttaaaggac aacaaaatga ataaaaacga attttttaag
     5761 aaataccacc tagagggttc actagctatt ttggatttgg atgcaaatga cgatcaaagc
     5821 caattctgtt accaagcatt gttggagtat agagaactcc cgttagacac atttcttgca
     5881 gagtactcag atgatgagga tatgacagag tcagagttta ttgagttaat gcttgatgaa
     5941 ttagagtgga ttatccgcag agctaagaat gctaaacggt ttgttaaaaa acgacaaaaa
     6001 acgatgaggg aggaaattat gtaacagctc aacccaacca acgccacatc atccgtctag
     6061 ctgagaaaca ggtgtggcgt ttgttttaag tgggcaatca aaagcgataa cgtttttaat
     6121 tgtttattta tcggagtaac aaatgacaga caaagccaag ctaatccagc ttatccatat
     6181 tgccaagtcg caactagcaa tggacgattt aagctaccgt gaaatgctga aacggctcac
     6241 caataaaacc agctcgacca aatgcacggt ggtcgagttg cacaaagtct tacacgaact
     6301 gcaaaccaaa ggagcaaaag taaaatattt tgccaaacgc agcaaaaaac cgaccgctta
     6361 cagcccggca acaggggaaa cagcggtaaa aagccaaatt gctcataaaa tccgagcggt
     6421 atggataaca atgggcaaac acggattttt aaacgaccca agcgaaaaag cattaaatgc
     6481 ttatatgcgt aaggttatca ataataaaac tagaccaaca atattattaa atgtctctgc
     6541 attagaggct ggagatgcaa gttatatgct tgaaatcctc aaaaaatggc ataaacgtgt
     6601 gatgattaaa gccctaagca aaagttgcac agttgatcca aagataagct acgatgaatt
     6661 agtggagtgg tacaatgaag ttatgtagat gcccgatttg ccacagtgat atacacctag
     6721 aagctctcgt agaagatgaa gccgggcgtg aactactcgg caaaatcagc caattaacac
     6781 acggtgttgc tcaaccgatg gttgcttatt taggcttatt taaaccgcaa aaaagtaacc
     6841 ttaataactc aagagccttg aaaatactca atgatgtatt agcactctac ccttgctcat
     6901 tgctactggc tcaagcccta tctgaaacgg tagtaagcat acgcaaaaaa cgtcagcaag
     6961 caatggaaaa cgggcagaaa attgaaccgc taccgaacca taactattta aaatcggtgt
     7021 atgaaacgca aaaagtccat tttgctgtgg tgagaaccgg caaaaccgaa cgcgaaacaa
     7081 tgaaagccga actggaaaaa acacgcaatg cgattgccta tgtgcaacgg tttgttgatt
     7141 taggacgtga agaggttgtt aaaaatagcc ctgagtatca gatttggtta gctcataaac
     7201 ccaaataaca caagccacca aaaggtggct ttttaacttt ttgaaagtgc gataaaacct
     7261 gatttaaaca ggctttaaac gggttttaag attgagttta aaaaaatatt tcacaaaata
     7321 agaatggttt tttatacaat aaccgaaacg gtttttggat aggaaataga caatggaatt
     7381 agtggatatt tttgaagaaa aagccccgga agtgttaacc gatttagcca aacatattga
     7441 agtcgcatta gaagaaaaat gccaatttag ccccgaaaag gcaaagcaaa tcggtattga
     7501 tattgcccaa caaatggctc aaaactgggg tggcgaggta atttatattc ctcgcaattt
     7561 gttgatggct cttaatgagc gagatatgaa aatttacgaa gagtttaacg gtaacaatca
     7621 ccgtgaattg gctcgtaagt acaatgtatc aatgcagtgg gtatataaaa ttgtgaagaa
     7681 agtccataag gacgaagttg cccgcaggca gatgagtatg tttgagatgt aaatcatttt
     7741 ttcccagccc tgatcatttt cagggctttt tgtgtattaa aagaacgcag tctttaaacc
     7801 cgtttaaaat caatttttca gcaaattctt taaactcctt ttaaagcaat tttaatagga
     7861 gtgtgctatg tctcaaaatc ttacctttcg ccaaattttt gaccgtttaa tcggacacga
     7921 gggcggctat gtcaatcacc cacaagaccc gggcggagaa acccactggg gaattaccaa
     7981 acgtaccgcg gttgctaatg gttatatgta tgcaatgaag aatatgaccc gtgagcaagc
     8041 ctaccaaatc tacgaaaaag ccttctggca acgttatcgt tgtgcagagc ttaagccagc
     8101 agttgcttat caatttttcg acgcagtggt taatcacggt tttggtaatg ctagtcgtat
     8161 gttacagcgt gcagtaggcg tagcggatga tggcattatt ggcaatatta ccctgcaggc
     8221 aattaatgca aaatctgaaa gcgatctctt aatgctattt aatgccgaac gtctgaagtt
     8281 ttacacaaaa ttacgcaact tccccacttt tggtaagggt tgggtcaatc gtgtggcagg
     8341 caatttagaa tacgcagcac aagataatga ggtttaaaaa tggcaaaact atttaaagaa
     8401 ctactctcaa ccaatggcac attatccacc actagcaccg tgcagttttt tggcacattg
     8461 tgtgtatttg gtttaatggt ttatgcagta attacccaac aaccttatgc cgaaagccta
     8521 ttaaataatg tgttgattta tctttttggg gcaactaccg ctaagggtgt agtaaccagc
     8581 tatcaagcca aaattaaagg gggtatccat aaacaacaaa gtacatttaa agaggaggag
     8641 ggatgttaat gcaacaaatt ttaggcgtga ttggcgtcat cgcagcaata ttgtcttatg
     8701 ctttgtttaa aagctggcaa ctaaaacgtg agcgtaaaaa gaatgccata ttacaagctg
     8761 aaaaacagca acaagcggtt gaaattgagc aaaaaaaagc agaggtaaaa tatgtgtata
     8821 tatcaaagaa aaacaatgaa aaagttactc gcagctctgc tagcgatatt gatgacaagt
     8881 tgcagcaaca cggttacttc cgtgacaaca acaggttgca cggcgttcag tctgatttat
     8941 ccgaaccgtg cggatacgct ggaaacgaaa cgtcagattc ttgctcataa tctgactttt
     9001 gaggaaattt gccaaaatga aatacattaa aaaattacgt aaacgctggc aaatttggcg
     9061 ttttttaaaa aatcatcctg aggttgcaca acgccgagat ttattagcga ttgccattaa
     9121 acagggcgta gaaaaccctg tagggcgtgc aagacggagg gagccataat ggatttattt
     9181 acagtctttt gggagtctat ccgtgctaac tttggtttta tttctgcgtt actcaccatt
     9241 gttgttacgg cattttggct caagctagat agcaaatacg ccaagaaaaa tgatcttggt
     9301 gaattgctgg aaattgccaa aagccacgat aaccgcttaa ccaccttaga aaccaaggta
     9361 gaaaacctgc caagtgcggt ggacgtggaa aagctgaaaa ccttagtcac tgatgtaaaa
     9421 ggcgatacca aagccacctc aaagcaggtg gatagtatca gccaccaact cggcttgtta
     9481 ttagaagcaa aattaaagga atgatatgtc gttaagagat ttactcactc aagaccaacg
     9541 gctggtgatt ttacgctcat tagcggaagc cggctatgat gccaatgagt caattattag
     9601 tgattgccta gatttatacg gtcacgatat tagccgtgat ttagttcgca cccatttaag
     9661 ttggcttgaa gagcaaggct tacttacctt agaacgtttg cgagatggct atatggtggc
     9721 aagcattacc cagcgtggct tagatgttgc tcaagggcgt gttgtggtaa gtggcgttaa
     9781 acgccctcgc cctaaaattt aaacggtatt taaggagcgt ttaaatgagc gagaaaaata
     9841 ctcgtggtcg agcatcaaaa gtcgatttac tgccgccgaa tattaaaacc caactggcga
     9901 tgatgttgcg tgataagcag tactctcagt cacaaatttt agaagaaatt aatgacttaa
     9961 ttcgggattg tggcttgcct gatgaaatgc tgttaagcaa aaccggatta aaccgctacg
    10021 caagccgtat ggaacgctta ggggcaaaaa tccgtaatgc ccgggaagtt gccgaaattt
    10081 ggactaagca attcggcgaa atgccacaaa ccgatattgg caaaacccta atggaaatgg
    10141 tcaagcaaat tgcctttgaa acctcattga aattaggcga acaagaaggc ggtattgagc
    10201 caaaacagct tgctttgctc tcgtctgcta ttcaacgttt agaacaagcc gaaagtttga
    10261 gttttaaacg ggaacaggca atccgtaaag aggtcgcaca acaagccgct gaaaccgctg
    10321 aaaaagtggt ggtgcaagcg ggtttatccg ctgaaaccgt ccgtacgatt aaagagcaaa
    10381 ttttaggaat tgcataatgg cactactcaa taacagaccg ctgaatgaat tagcccctga
    10441 atgccgttcg tttttagaga gcattcacgc ttttaatcct aacgaactgt tattgggcta
    10501 tcaaaagcgg tggattgcgg acgacagcca actcaaaatt gccgaaaaaa cccgccgttg
    10561 cggtttaacg tgggcagaag cagcagataa cgccttaatc gcaagcaccc gcaaatcaga
    10621 cggtggctct gatgtatttt acattggctc aaataaagag atggcacgtg aatatatcga
    10681 tgctgtcgca atgtgggcaa aagcctttaa tcgtgtggct ggagaaatcc aagaagagat
    10741 ctttgaagac gaagataaag acatcttaac ctatgtaatc tacttctcat cgggttttaa
    10801 ggtcaaggca ttatccagta atccgaaaaa cctgcgtggt atgcagggcg tggtggtgat
    10861 tgatgaggcg gcattccacg aatacttagc ggaagtcttg aaggcggcgt tagctctcac
    10921 aatgtggggg gcgaaagtcc gtattatttc gacccacaac ggctcggaaa atctgtttaa
    10981 tgaactgatt accgatagcc gtgccggccg caaacgctac tctgtgcata cgattacgat
    11041 tgaagatgcc tgccgtgatg ggctatatca acgtatctgc caagtagtga cgaaaaaaac
    11101 gtggtcaccg gaagcagaaa aagagtggat tgaaaaccta ctcaacgaca ccgccagcga
    11161 agaagacgca ttggaagaat acttctgcgt accgaagttc ggctcaggct tatggctctc
    11221 tcgtgctttg attgaacggc agatgagcga agccacgcct gttatccgct ttacggcaaa
    11281 agatggtttc agccttgtgg ctgaaccgac acgctatgcg gagattgccg aatggtgtga
    11341 attagaactt gagccgatat tggcaaccct taaccctgat ttgttgcatt ttatgggcga
    11401 agactttgca cgcagcggcg atatgacctc tctggtggtg cttgctcagc aacaaaacct
    11461 tgttcgtaaa gtcgccttta ttgttgagct tggcaatatg ccctacaagc aacaagagca
    11521 aatcgtgatg tttatgctta aacgcttacc gcattttgcc ggtggggctt ttgacgcccg
    11581 aggcaatggt ggctatttag ccgaagctgc acgagatgaa tttagcacct tgattgactg
    11641 cgtgcagtta tcggaaaaat ggtatcggga acacaccgcc ccctttaaag cggcattgga
    11701 agacggcgag ctggaagcta ttccaaaaga tgcggatatt ttggctgatt tgcgttcatt
    11761 tcaggtggtg aaaggcgtac cacgcatacc ggataaacgc actaaaagtg cagatgggaa
    11821 aagcaaacga cacggtgata ccgcaatttc tttgctgttg gctcattatg ccagccgaca
    11881 attagtgcaa atgccagttg agccggtatc acgccgtcca cgccatagcc aacaattaac
    11941 agaaggatat taacaaatga gatatgtacc actttgttta atgatgtgtg cctcattcta
    12001 cctatttatt aacaacattg acggctgggg ttggggaatt cttttatctt ttattttagc
    12061 gagtgcagct tatggcaaag aagaataatt taattagtga aattgccacc cgtgccagaa
    12121 gtattgatta ctgggcattt ggctattatc tgccgaaccc tgacccgatt ttaaaacgaa
    12181 tggggaaaga tatttccgtt taccgtgagt tgttatcaga cgggcaagtt cgctcaggcg
    12241 tacgccgtcg aaaagcggcg attaaaggct tagagtggcg aattaccacc actaacaatg
    12301 agaaagtgga cgagcagatt tatcaaatat ttaaccgctt gccgatgaat aacctgatta
    12361 ccgaaatgct caatgcagca ctctatggct accatatcag cgaggttatt tgggcaaaag
    12421 agggtgagtt atttgtgcca acagaaatca ttggtaaaaa gcctgaatgg tttatgtttg
    12481 acgacgaaaa cctactgcgt ttccgtacca aagaaaactg ggcggacggc gaattattac
    12541 cagatgataa gttcttgctt actacgcaag aagccaccca agataatccc tacggtttag
    12601 gcgatttatc cctctgcttt tgggcggcga cctttaaaaa aggcggtttc aaatactggt
    12661 tggaatttac cgaaaaatac ggctcaccgt ggttgattgg caaacaccct cgccaagctc
    12721 acaatacaga taaagagcga ctagctgatg ccctagaggg aatgattagc tcagcgattg
    12781 cggttatccc tgaagatagt tcggtcgaaa tcaaagatgc agcgggcaaa tctgccagca
    12841 ccgatgcctt tgaaaagttc ctcaattttt gcaaggcaga gatcaatatc gccctacttg
    12901 ggcaaaacca aaccaccgag caagaaagca accgtgccag tgcacaagta ggcttggaag
    12961 ttatggaaga tattcgctcg gacgaccaag cgatgattga agccaccttc aacaccttgt
    13021 tgcagtggat tgtgaaatat aacttcaatg tggaacaact gccgaagttt gaattttacg
    13081 agcaagaagc catcaacacc gaccaagttg aacgagacag taaactccac gcaatgggcg
    13141 tgcgtttttc caaagcctac tttgagcgtg aatatggctt tgaggcgggt gatattgagg
    13201 tgcaagcggt cgaaaaagcg gaaaaatctg caaataccac agaatttagc gaaggacaac
    13261 gccgaaccca agtgccaatg cctgtgccaa ttttggaaca gctagaacac gagggagaag
    13321 caatggtgga cgattggcta caaggggtga gagataaact cgctcaagca gatagtctgg
    13381 aggatttcca aagtcagcta gatagcctta tccctgaatt aagctttgcc gaatatggcg
    13441 agctgttggc gttaggctca acggtggcag agcttgcagg cagacaatcg gtaaacgatg
    13501 aaattaaggc aaaacgcaat gcgtaaattt acctttaaac agcaagccca atattttgag
    13561 aaaaaactca atctccgcac gaatagctac cttgatattc tgggcgaaga gcacgactat
    13621 tttttcgtgg tggctggggc gaatcgtaat gaagtgttga gtgagtttcg caaggcggtg
    13681 gatgaggcta ttcacaacgg cgaaacctta gagaactttc gcaagcggtt tgatgaggtt
    13741 gtggcaaaaa caggctggga gtacaacggc ggacgaaatt ggcgaacacg gattatttac
    13801 gataccaatg tttacggggc gtataaccgt ggacgtttgc aacaacattt agagcttgcg
    13861 gaggatatgc cttattggga atatcaacac aacgacaacg cccaccctcg cccacagcac
    13921 gtggcgtggg acggcttggt gctgcgttat gacgatccgt tttggaaata tcactatcca
    13981 ataaaagcct acggttgcca ctgcaccgtg caagcgttag atgattttga cctcaagcac
    14041 gatggtaaaa ccgtcagccc accacctgaa attgagtttg aacaaaaaac ggtaggcgtg
    14101 cggacaggca attcacgagt cgtaactgtg ccgaaagggg ttgatgtggg ttttacaccg
    14161 cataattttg ataatctcaa agccgggaga gcagcaaatg tagataagtt gctaatgcaa
    14221 aaaatggtta ccgccgatcc tatatttgcc tccaaagcag tcagtgattt attggcaaaa
    14281 gagccggttg caaagttaca taaccaagcc tttaaaaatt gggtaaatga tgttgccaat
    14341 gctaaaggaa gtgcattatc ccaagtagag aatatgcagt tgttaggggt actacctgtt
    14401 gcggtgattg aacggttaca gcagatcaat ttagctccgc aatctgcaat tattgcaata
    14461 acaaaaggcg atatggtaca cgctctacga gagctaaaac aaaataccgg tattgccgta
    14521 ccgttggaat tttgggaaaa gttgcctgca aagttacaat acccaaatgc catcttgttg
    14581 gaaaaacaac aagcagaaac tacattgctc tttatctatg acgtagctca aaccaaaatt
    14641 gccgtaaaag tcaattatga tgcaacttta caagatagac acggagcaaa aggacggcag
    14701 aaagtcttac tgaatcgagc ggttacaggt agtttattcc aagatacaac tggattgaaa
    14761 agttcaaagt atgaagtgct attgggagaa atgtagcggc gaaggactcg aaccttataa
    14821 tgtaggttaa acctacaacc tttaccaatt aggaaactac cgctacattg tgtaaattca
    14881 ctatacccct aaattatttt ttaatcaata ggagaaacaa aatggcagaa aaacaacttt
    14941 cctttaaagt agccgaaata gtgccaatgt cagctattaa cactatgcgg cacttaatta
    15001 gtttggcatt acaagcgaat tatgagagag aaaaatctcg tgcttgataa tttcaatggc
    15061 ttgtagttcg ggaactatat tatctgaaac aagccattgt tttgttgatg tcagacattt
    15121 agcgatgaaa tccataatta aaccattagc agtagctcgt tgttccggag taagttgtaa
    15181 ccacgacgcc tctgtttgtt ggtctaatgt ataaagaaac ataacggctt ctttttctga
    15241 taatgggtca agtggtaatt tttcagcttt tgtgactaac cattgacggg aaagcaataa
    15301 atcataaacc agttctattg cttgttctgc atttaccatc atattctaat tccttaatat
    15361 atcagggcaa cattacccaa tctatatttt actgagattt gcttaatgat caaaatcacc
    15421 ctcaacaaca cccaagcggt caaatcgtta caacaaattg caaatcagct ggaacaacct
    15481 cgccgactgt atggcatttt aggggaaacc ctaaagaaaa ttcacactgc acgctttaaa
    15541 gcggaacaag accccgatgg caacaattgg aaaccgttag ccagtagcac gcttgcttta
    15601 aaacgtaaac gaggtaagtc cactaaaatc ttacggcaag acggctacct tgccgataaa
    15661 acggcttaca atgttacaag tgataatgtt gagtttggct cgcaggaagt gtatgcacgg
    15721 ttgcatcaat tcggcggtaa agccggacga ggcaaaaaag tgactgtacc ggctcgcccg
    15781 tggttaggcg taggcgataa agatgagcag ttacttttac gcaaagctga gtggcattta
    15841 gggcaaatta tcggtcgtat gggaaaataa ccgcttaaaa tcaaatttaa cgcataaaaa
    15901 cgcctctgtg cgtttttatt ttttattcgc ctgattattc gactcaaaaa atttaaacgc
    15961 tgttaaacgc atttaaacgg tatttaaacg gtattgccga ttgtgataaa tcctctttat
    16021 taaaacaccc tcgaaaaatc tttaaaccag tttaaaagct aatttctctc caaatcctta
    16081 ttattgcccc atcacggagg caatatgacc caaattgaaa tttttaaagc cggtaagcgt
    16141 tatgacgcca acggcacgtt aattgacatt acccctgaaa tgttgcaaca gaccgttgct
    16201 gcctataacc ccgaatttca cgaagctccg ctggtgatcg gacacccgaa atccaacaac
    16261 cctgcgtggg ggtgggtaaa agccctttcc cttgagggcg atgtactaaa agcagaagta
    16321 gatcagctag acgctgagtt ttcagaaatg gtggcaagcg gcaaattcaa aaaagtctcg
    16381 gctgcttttt acttacctga tagcccgaat aacccacata aaggcgtgtt atcgctacgc
    16441 cacgtggggt ttttaggggc aatgccaccg gcggttaaag gcttaaagca ggtggaattt
    16501 gcagaagatg atgattttgt cgtcttttct gaatgggggg ttgcaagtct atttagtcgt
    16561 tttcgtgatt ggttggtgag tgagttcggg cttgaaaaag ccgataaagc tcttccccca
    16621 cacgaaattg attggctgaa agaagaggca atgcgaagcc aaattagcaa acaggtacac
    16681 gccgaacagg caacacctga accgattttt aatgaacccg cacaaccaga aggagaacct
    16741 gaaatgagtg cagaagagaa ggaagagctt gaacgcttaa aagcggaaaa cgagcagttg
    16801 aaagccgaaa aagcccaagc cgaagcagag aaaatggaag cagagctgga agctgaaaaa
    16861 gctggtaatg cagagttttg tgaaggttta gtcaagcaag gcaaacttgc cccggtggca
    16921 aaagcggcgt ttgtgcaggc tttaaataac ctttcagtat taaaagccgg tcgtgagccg
    16981 gaatttaatg agggcgaaga tgtggtttca cagtttaagt ctgcaatgtc gcaatcacca
    17041 cagattatcc aatttggaga atatgccaca gcagataaag ccaacccaca agaagcggaa
    17101 gcagtggaat atgctgaagg cacagatcca gtttcgattg aagccgacca aaaagtgcga
    17161 gcttatatga aagcccacaa tgtaggctac gctgcggcat ttaatgcgat ttatcgctaa
    17221 tgtttaaccc acaactgaaa aggaatacta atgacaactc ataacttaca aaaactgcgt
    17281 gtacaagacc ccgttttaac cgagctggca caaggctatc acaataacga gctggttgcc
    17341 gagaccttaa tgccgactgt cgaaatcgaa aaggaagcag gcaaaatccc aactttcggg
    17401 cgtttagctt tccgattgcc ttctaccgtg cgtaacttgc gtggttcatc taaccgttta
    17461 gatccagaag atattggggc gattgatgtg gcgttagaag aacacgatgt ggaatatgcc
    17521 attgattatc gtgaagagaa cgaagccatt ttttctttac gtcaatttgc cttaaatacc
    17581 acccaagatg tgattgcgtt aggtcgtgaa aaagcggttg caaccctcgc cttagatgaa
    17641 agccgttatg aaacagacaa taaagtcacg ctgtccggca ccagtcaatt cagccataaa
    17701 gatgctgatg tgtttaaggt atttgatacc gctattcgtg ccgtgaagcg ggctatcggt
    17761 cgtaaaccga atgtgtgtgt gatttccggt gatgtgtggg cagcgttaaa agaacatccg
    17821 gcagtggttg aaaagctcaa atacagtcaa gtagcgattg ttacccctga ggtgtttgcc
    17881 aaactgatcg gcattgagac cgtaaaaatc ggtgaagcgg tgtatgaaga aagcggtcag
    17941 ctcaaagata tttggagcaa agatattgtg gtggcgtatg ttgctcctcg ttcgaccgga
    18001 ggcaaaggca cggtttacga gccgtcttat ggttacacgg ttcgccgtca aaaaggctta
    18061 tttgttgata cttataaaga gagtggcggc aaaattgaag tggtacgcac gaccgatatt
    18121 cacaaacctc atttagtggg tgcggcagca ggctatttaa ttaaagctgc cgtataagcc
    18181 acataccata gggtgcgttt actaacgcac cattatctca aacacattac atagaggaaa
    18241 aaacgatggc taaatttatt gttttacata ccccaatttt acacgatggc aaacgctatg
    18301 aggtgggggc agaaattgaa ctcaccgctg aacaagctga gaacaatgcg atcaacttaa
    18361 aagcggtaga agctgttcca aaaccaccta aaaatgcctc aaaacctgaa gatgagccaa
    18421 aacccgaagg tgaacctaag cctgaagatg cagtgacgga agatgatgtg aagctggctg
    18481 aagcaaaaat tgcagaagca gagcaaccaa aagggaataa aaaataatgt atgtgcagat
    18541 tgatgagcta ctcacggcgt ttagtcgcaa gattgtggtg cagctcagta atgatgaacc
    18601 gacagcgacc gagcctgatt taaagatgct tgaaacggca gttaaagtgg caaatgagcg
    18661 aattgatgca gcgttacgct ctcgctatac cttgccgctg gctgatgtgc ctacgcttat
    18721 taatcagcac gcattaaccc ttgcccgtta ttggctttat gcccgccgtc ctgaaaccaa
    18781 aatgccggac accgtgaagg aaacctacca acaagcggtg aaagagttgg aacagattgc
    18841 aacaggcaaa ctgcatttag gcattgctga aagcagtcaa attttagaag acgatgtttt
    18901 agccgataac agtgaatatg aagttcgggc gaacgctcgc attgatacca gtcgttatta
    18961 aagattatgt cagccacaca accgatttta gaagatattt gccaacactt gcggcaagca
    19021 ttgcccgagt gggaggtgga actcttcccg aatgacccaa gcacctatca tctctcgcac
    19081 attaacggtg cggtgttgat tagctatttg gcaagcaaat ttgagaaacc tcgcactaca
    19141 caagcggtgc tgcaggttcg ccacgttcag attgctttaa cggtgctgac ccgtgatttg
    19201 cataatgatg tcggggcgtt ggatttgctg gataaattgc ggttattggt tgtggggttt
    19261 aagcctcaaa actgcggtga gtgttggttg attgatgaat tttttaatgg ctcaagcgaa
    19321 gaaaccgggc tttggcaata tcagttgatt ttgcaaaccg aaactcagca ggtgcaacac
    19381 caagcggtcg aaaatctgcc aaaatttgta accgctcatc ttcgccgtca agaccagcct
    19441 ggttcgcccg gacttaaaac ttaaatcgta gggtgcgttt gctaacgcac catcaacatc
    19501 acctgatttt acggtgcgtt ggcaaacgca ccctacaagg agaatattat gacgtttcac
    19561 cacggttctg aaaccgaacg agtaaacggt ggctctgtgc cggtatcggt ggttgatagt
    19621 gccattatcg gcattgtcgg tactgcccca atcggcgcag ttaatgaatt gaccgtctgt
    19681 ttaaccaaaa aagattttgc caaattcggc acgattttaa accaaggctt caccttacct
    19741 gatgcctttg atattttagc tcgttacgca gcgggtaaag tgtatgtggt gaatgtgctt
    19801 gacccttccc gccaccgtac taccgtgacc gatgaagtcc tcacactgga tcgcaatacg
    19861 ctgaccgctc aaacagcgaa aaccggcatt attgcggtga cgagagtgaa agacggtgca
    19921 aacgtgctga atgctgatcg gtattcggtc gatctgcaaa ccggcgtggt gacctttgtc
    19981 tctgcaccgt ctgccccgaa aattagctat atctatgctg acccgagcaa agtgaccgaa
    20041 gaggacatta aaggcggggt ggatagctta accggtaaac gcaaaggttt tgaactattg
    20101 cgtgatggtt ttaaccttta cggtgcggat gccaaaatct taatctgtcc ggaatttgat
    20161 aaaaccgcaa gctgtgccgc tgcccttgcc acccttgccg accaactgca cgctaaggcg
    20221 tatattcaac tgccgaaagg gacgagctta tcaaaagcta ttcaaggacg tggcccggca
    20281 gggacgatta acgcctcggc aagcaatgag aacgtacgcc atttcttccc gtatgcgttg
    20341 gggtcaagca atactcttga aagccttgcg acccacgccg ccggtttgcg tatgttgatt
    20401 gatgtggaga agggctactg gttcagcact tccaataaag agctgaaagg ggtgatcggg
    20461 ttggaaattc cgctgacggc tcgggtggac gataagcaaa gcgaaactaa tctgctcaat
    20521 gcggtaggga ttaccaccat tttcaatagt tttggcacag gcttccgctt atggggcaac
    20581 cgttcgtcta acttcccgac tgtgacccat atcagcaact ttgaagtcgc ctctcgcaca
    20641 ggcgatatta ttgatgaaag cattcgccaa gccgaattgc agtttattga tttaccgatt
    20701 gatgatgcgt tgctggatag cttccttgaa accatcgaca ctttcctgcg tacgcagaaa
    20761 tcgttggtag gttattcggt gagcttagac tatgaatatg acttggttga tgcattcagc
    20821 cgtgggcaag tcccgattgt gtatgaatac actcctaaaa ttccgggtga acgtatcagc
    20881 aataaatctg tgatgacccg taaatacttg gcaaacttgg tgtcgcaacg ataaggggaa
    20941 ataaatgagt attgcaatta accaaattgt aaacggaaat gtttacatta acggcaacag
    21001 ccaaatgggg cgagtgaatg aggtcaaaat ccccgatatt gagtttgaat ttatcgaaca
    21061 caaaggcctt ggaatgcacg gtgtgattaa attacctgcc ggcacgaatg cgattgaagc
    21121 agaaatcact tgggacagtt tttatccgga agtgcgtgcg gtaatgctta atccgtataa
    21181 atacactcag ttgcaaatcc gctctaacct gcaagtgttt aactcgcagg gcttggcagc
    21241 cgaagagccg atggtcacca ttatgaatgt gtctgccggt aaaatcggcg gcacagggca
    21301 taaaaacaaa gaaaatgccg aatttgccga cacgttaaat gtacattcaa ttaaacagac
    21361 cgttgccggt cgtgagctgt tatttattga tgtgctggcg aatatctacc gtgtgaacgg
    21421 ggtggatgtg ttgcaaaaat tccgcaccaa tatcggttag taaaatcttt aaagccgttt
    21481 aaaatcaatt taaacaccgt ttaagtaaac tcctttgtga agttaaacaa caaccactca
    21541 caaaggagtt tttttatggc taacgcagct caacaagtat taaccaatct tcgtgtacaa
    21601 accacttata aattgcaata ccctatcgct ttaccagatg gtagagttat tgaaacctta
    21661 gatgtacgtc gtccaaaagg taaagatttt cgtttgcttg atgaaaaagg gtttgaccct
    21721 gaaaaagatg gcgtaaaaat tctacgcttc tatattcaac agctcaccac acttgtgccg
    21781 gaagatattg atgaactcga tgctgccgat attaagggct taaataacct attggaagat
    21841 atgcttattg agggaaagtc cgacaaataa gtgaactaga taccgtttat gctgatctcg
    21901 cttggtggtt taagttttca ccaagcgagc ttttagaatt ggatttagtg gatattccga
    21961 aatgggtaga acagatgaac aggcaaataa aagccggtta tgggcagatt ttacggtaga
    22021 gccaaataaa gggttcggtg gctaaagtaa gtaaaatggc gacgccccaa gctagataca
    22081 caccaaccca cgccaagatt gtcaaaatca atccataaat gagtacaaaa ctaacgccct
    22141 cgcttaggct ttgtatagat tgaatcgcat ctaaccagta gaagatactc caaccgacta
    22201 atgctaccgc taacaaccat ttagcggtgc attctgttct tgttacacaa gcctcgaaac
    22261 cagcccactc agtaattcga ttatttaatt tagtcagcat acaccacctc cttaaacttt
    22321 ccctatttta cgctaaggat ttaaccaatg gcaaataatt tagctatcgg aatggtaatt
    22381 ggtgcaagcc tatcatcagg ttttcacggt gctttttcag gagcaaagaa aaagctagaa
    22441 caattagaac aggctgtcgc taaaaatcag caaagccatt ctaaattagg ttctgagctt
    22501 actgcattgc gtagtaaaca agctactctc tatgcagaaa tgagccgagc cagtagtaaa
    22561 ggtggtgctg ggcttgctct tatgcaacag gaatataaaa aaattggcaa agaaattgcc
    22621 aatattagcc gagagcaacg caaatggagt acagaattag aaaaatctat tgctaagcaa
    22681 actaaattac gcaatgcaat ggaacgtcat acacaagcta aagaaaaccg agacgagctt
    22741 aaagggaaaa taattggaac ggtagcttct gcggcaatgg gtgtcggcgt gatgaaaacc
    22801 tatatggagc aagaagaagc tgcgaataat cttaaaattt caatgctgaa agcagatggt
    22861 tctttcggga aatttgaaga gattggcaag attgctgaca cattagggac agatttaccg
    22921 ggaacaaaaa aagatttcta caagctcgca atggcattaa agaaacaagg tgtttctgat
    22981 gatgtgctga ccggaggggc attaaaaact tctgccgaac tgaatgtctt gcttgatatg
    23041 gatcaggaaa gtggtggaga gtttttagcg aagtttatgg aatctcaccg gctcaatgaa
    23101 aatgagttac cacaagcagc cgattatctg caacgagcaa tgtttgccgg cggtttaagt
    23161 aaagagcaga tgtatgaatc gatgaaatac tatgctccaa aactgaactc aatgaaactt
    23221 acaggggctg agaataccga aaaagtgctg gcgattgaag caatggcagg tcagcaaggc
    23281 ttagagggtt caacctttgg tacgggctta aatatgatgt taagccgtat gaataaagga
    23341 ccggaaatgc tcaaggcagc agccaaagga atgaaagccg aagctcgaga gatgatggag
    23401 gctgtcggag tagaatttaa tttctgggat aaaaacggct cattcaaagg cattgatgga
    23461 atgctggctg aaatgacgaa atttgaaaaa atccgcaaaa aattcggtga caaaggtgta
    23521 ggtttagttg cagaagagct gtttggcatt gaaggtgggc gtcttgctga tattttggct
    23581 atgaaaggtc aaaaaggctt agatgaaatg ctgagtaaaa tgcgtgaaca agccagcctt
    23641 caagatcgca ttaaccttaa aacaaataca ttaggtgctg ccctagaatc tttaggagga
    23701 gcgtgggaaa cctttgtggg ggatattggc tctgtctttg ccgaagatat aaaagggttt
    23761 tcaaaaggct tgcaatctgc ggtggaatgg cttgtgccat ttgtatcaaa acataaagag
    23821 gcgattaaat ttgtaggtgg tttggttgct ggacttgtta ttttacgagg cgttttacaa
    23881 gctggttctt ttgttattca aacggtaact atggcaatga acgccctcaa aattgcagca
    23941 atgaccaatc ctattgtctt agtcattgga gcaatcgcag cgggtgctta cttgatttat
    24001 agccattggg atagcattgc cccttggttt gcaaatcttt ggcaaaatgt gaccgcttac
    24061 ttcaatcaat tttggacttg ggtaaaaggt gtttggtcgg gcgtgacgga ctgggtgtct
    24121 tctgtgtgga atggtgtagc cacttttttc gggcagttat ggactacgat tactagctta
    24181 tttagtgtag cttggacaaa tatccaaaca atatggggag gagcaacagc ttggttctct
    24241 ggtttatggg atgggattaa gtctgcggct tttggtatgt tcgacagtat tagccaaaaa
    24301 gtcagctctg ttgtagcaag cattaagagc tttttaggct ttggcgatga tgtggataaa
    24361 atgggggcaa aaattggcaa tgtagctacc caagtcatca gcaaagaaca ctcaggacaa
    24421 ctcagcaaaa ccgcagatat ggcagccaat acagggttct ctagcggtgg tttcaccggg
    24481 caaggcggta aatatacccc tgccggtatt gtgcataagg gcgaatatgt gatgacgaaa
    24541 gaagcgacct ctcgtttggg tgttggaatg ctggatagct taaactatgg cggtgctatg
    24601 ggtttcactc aacctgtttt gcaaccgatt ttaggtaagc aaaaaggctt ttttggctca
    24661 ctttgggacg atgtgaaatt cggggcaaac tttgtcggca atctgcttgg cttaaatcaa
    24721 ggcagcctga aaacgcctga ttttaaccca aatgcgacca atgcaagcgg tcaaaattcg
    24781 tcgattttta gcaattatga accactcaac cgaaatgcgg taacacagca ggaaagctcg
    24841 caagcaccgc agatagtcgt gaactttaac ccgacaatca atgtaaacgg taatgctacg
    24901 caagaggctc aatcgcaaat tatgcagcag ttgcaaatga gtgcttatga gtttgagaaa
    24961 ttgctcaatc gtgtgctaga ccaacgaagc cgtagagcct attaggagtg atttatgtat
    25021 tttatgttag gcaatattgc ctttgagccg gtgaatttaa ctgaatttag cgagcaacat
    25081 accgccgaat ttgccgaaca cgctgtgcta aaaggcaaac ctcgtttaca agcgatgggc
    25141 gaaaagctaa atgaacttaa tttttctctt cggttgcacc ataccatagg cggtgtagag
    25201 agccgttatc aagccttgct tgaagccaaa gcgaagcaag cggcattggc gttaatttgg
    25261 ggcagtcgtt ataagggaga ttatgtaatt gtcgatattt catcgaccac attgttcacc
    25321 gatggcagag gcaatgccct cgctcgtgaa atgcaaatca gcctgaaaga gtttgtgggc
    25381 gataatgacg gtggtgtgtt gggtgaggcg ttaaattttg gtggtggctc actgcttggc
    25441 tctattttgc caagcggtgc ggtaactacc ctatctcaaa tcaaaacagc agtcagccga
    25501 ggtgtggagc tttataacag cggcaaacgc ttagttgacg aagtgcaaaa taccgtggcg
    25561 attattcggc agttgaaaaa tgacccggca actgcattgg catatttacc cgctgcatta
    25621 gcgaatttag acggggcatt ggggcatttt ggtaatttga ccggctcatc ggcgaccttg
    25681 ggcggtttgc aggagaaact accggcagca gtggtcttta gcgaggaaat cggcgagatt
    25741 tatcagagtt tgcaaacaat gcgaagcagt ttgggtaatg cctcggcaaa tagctgggat
    25801 aattggttta caccggcaga gagtgcattg acagaggtca cagacagctt tgaccatcta
    25861 gcaaaaccgg tggcaaaaat gaccgcttgg attgtgctgc gtaccgatga ggaggcagaa
    25921 aatgacacag ttgcttaaac atatcgtcaa acagggtgag cgttgggata acttgagcta
    25981 tcaatactac ggcaatgcgt ttgaatatgg tcgaattatt gatgccaatc cgcatatcgg
    26041 tttttgcgag gtgttgccga taggggtaac aatttatatc cctgtactta acgttaagcc
    26101 aacgaataat gaaaatatgc caccgtggct aagggggcgt gatgcgtaat gtaccgaagc
    26161 ccgatttttc actgttttat gaaaaaacca atatcactgc cgagattgag ccacatttgg
    26221 tgcaactgac ctatatcgac catttggaag gtcaatcgga cgaactcact gtggaatttg
    26281 aagacattca aggcaaatgg atacgccaat ggttcccgac tcagggggat aagctcaaag
    26341 cggcgattgg ctatcagggc gaatttctga cggacatcgg tgagtttgaa attgatgaag
    26401 tggaatatag ttataagcct tccactatta acttaaaagc tctaagcacc ggtatcagca
    26461 aagccaaccg tactttaaaa ccgaaagcct atgagaatac gactcttgct caggtggtgg
    26521 caaaggtagc agataacctg aaattaaagg tagtcggtaa gattaaggct atcccgatta
    26581 aacggatcac ccaatatcaa gagcgggacg tggagttttt ggcacgcctt gcccgagagt
    26641 atcatcacag ctttaaaatc gtgggcaatc agctggtctt taccgataaa agcgaactgg
    26701 ggcaaagtga gccggtgtta atgttggaag aacgggatac tatttcccta cgtttgcgag
    26761 atcggattaa agacactgca aaggcagtgg aaatcagcgg ctatgataca agcggtaaaa
    26821 aagtggtgaa aaaacgcaaa aaggcaaaag ccttacgccc gaatataaaa caagctaaat
    26881 cagccagtga agatacgctg aaaatcatca cacgaggcga aagtcaagaa cagattgatg
    26941 cacggggtga ggctgcgttg gctacgcaaa atgaagatca ggcggctggt gatattgagc
    27001 ttatcggcaa tcctaaattg gttgccggag caacgatttt attgcgtaac tttggcgtgt
    27061 ttagtggcaa gtatctgatt aaatcatcac gccatacgat tagccgtagc ggtggttata
    27121 ctactcatat tgaggtcaga atgttggagt ttattgccga tgatttaatc acattaggta
    27181 tggaggctgg caatgcaaac gcataatttt ggggcgactt atcaagaagg gattgtatcc
    27241 gctgttgatc cgaaaacgca caaagtgcgg tgtaaaatcc ctgcgctgga agatttagaa
    27301 actgcttggc tgtcgttttt gaccccgaac gccggtggca atcagtttta ctgtttgccc
    27361 gatgtgggcg agctggtggc aatgctactt gatgcacaag gcgaaggtgg ctgtgtgttt
    27421 ggggcaattt ataacgagca agacccgaca ccggttgccg atagcgatat gtgggttaag
    27481 aaattcagca atggcacgga gatttcgcat aatcgcaaaa ccggcgatgt ggtagtgaag
    27541 actaacgggc atttaaccgc aacggctcaa ggtggggcta cgattaatgc aaacaccgta
    27601 gtcaatggca cattgcacgc taccggtaaa atcacctctg acgaagaagt ctctgctcct
    27661 gttgtgaaac aaggcacggt agagcttggc acacataaac acggcggtag ccctgaacct
    27721 aataagtaat tctttaaacc agtttaaaat cccttttaaa gatagccctg tatcatcagg
    27781 gctatgaaca gacaaacttc cattcaatta acccactggc aacttgcacc ctcaaccgat
    27841 acagttgagg tggtgcaagg tattgatgat attcatcttt gtattgtcaa tatcctttca
    27901 acccaaaaag gcacggatat tttacgccct gaatttggct ctgaccactt tcgctacatt
    27961 gactaccctg aagatgtggc tatcccgaat tttgtacggg aaattacaac cgccttgcaa
    28021 aaatgggaaa aacgcattga ggttgaagaa gtattggtgg acggttcagc tccgcatttt
    28081 atttttactg tgatgtggca cttaaccgat gatgtttatc gtgaaattta ccgaacaacg
    28141 gtataaggat aggcaatgac agaagcgatt aaaatcattg atgacgatgt aaaaaccgta
    28201 cttgccgaag cgattgccga ttatgaaaaa cgcaccggta aaatcttaca acctgcacat
    28261 attgagcgtt ccattattca aacctacgct taccgtgagc agttattacg caaaggcatt
    28321 aatcacgcct ttttacaaac ctttccgcag tttgcgacgg ggattgcgtt ggatttgtgc
    28381 ggggaaactt ttggttgtta tcggcttaga gataaacctg cccgtacttt actacgcttt
    28441 tcagtaagtg gtgaacatac agctatagtt atccctaaag gaacgcaggt agcaattaat
    28501 gacgagctat acttttcaac gctcaatgac gatgttatta ctccattaat tacctatgtg
    28561 gaaattgatg cagagtgtaa tcaggttggt gttatcggta atggttggga atcaggaaga
    28621 gtcagtaaac taaaaacagc actggcaact aattataaag taacagttga aaacattgat
    28681 attacgagcg gtgggttgat gcaggaagaa gatgaacctt accgtaagcg aattttagcc
    28741 gcaccggaag cctttagtaa ctgtggctct atcgctgcat atgattacca cgtccgctct
    28801 gtatcccaag atattgcaga tgtgaatatc tctacgccta ggggtggctt ggtaagaatt
    28861 gcggtattga cccaaaaagg gttaccggat acccgattac ttgatgatat taaaaaacac
    28921 gttagtgccg aacggctacg cccactttgc gatatggtcg aggttattaa gcccacagaa
    28981 cgccgttatc aaattacggc acgtttaata ttgttagatg gctaccgtga ggatttggta
    29041 aaagcaaaag cccgagaggc attacaactc tatttgtcag acaagactaa aaaactcggt
    29101 ttagacattg tgccgtcggc catcatttca gctttaagag ttgagggtgt ttacgatgtg
    29161 aatttaattc agccagtcaa aactattatc aacgaaacag aatgggcgaa ctgcacagca
    29221 atcagcgtag aagtcgaaga ggagcgtaga gatggctagc ttgcactatg cggacattat
    29281 tgtgcgagac cctaaatata aagcattagc ggatttaagc aagcggttaa atttgctcga
    29341 tacttcgcaa attatgacta cgctggtgga tttattgggc gacgaatgta tcccattgct
    29401 ggcagaaaaa tggtcggtaa ccggctatga cggcttattg gttgcagata gcgaaaactc
    29461 aaagcgagcc ttaattaaaa gagcaatcga actacatcaa ctaaaaggca cgccttggtc
    29521 aattcgtgaa gtattacgca gactaggttt cggagaggtt gagattgacg agggactgaa
    29581 aaatcggctg tatgaaagca cttatgtgag cggaatcccc gaaaacgaac gctgggcgca
    29641 ctatgcgatt aggttgagta acccgattac caatgagcaa gctcgcaata tccgtaaggt
    29701 cttacgcaat tttgctccgg ctcgttgctc tcttgcagtt ttggattata aagcagatcc
    29761 aattcgatat aacaataaag caacctacaa cggcacatat aaccacggtt caagttaagg
    29821 ataaattatg gcaggtgtac aagaaaccgc acagtgggaa aaccacgttt acagaattga
    29881 agaaaatgac ccagtccacg gaggagaaaa cggtgtaacc aataagccaa ttaagcacct
    29941 agcaaaccgc acgctctatc tgcgtagatt gctcaccgag gcaggacaac gcattaaccc
    30001 gaaaaaaatc acagctacca gcaaaaatag taatgattta actgggcata ctcacgagat
    30061 tgaccacgca agcctaacgc aaaaaggcat tgtgcagtta aatgcgagta tccaatcaac
    30121 tagcacaact gagtctgcaa ccccttcagc agttaaagca gcctatgata aagcagcaac
    30181 agcagaacaa aaagcgacat tggcaaatga gaaagtcgag gcgattaaag taggcggacg
    30241 aaacctcctc attcaatcca acactccaca caacgggaat gcgtactcag tcagatacgc
    30301 attggctgag gctccgaaag taggcgaaga gattgtagtc actctatggg gtgaactcgg
    30361 ctctcaacgt actggaattg gcgtttacaa ctctcaaggt gctacggagt tggcaaaact
    30421 ggtcaaaatt cgtgatggag tttatcaagg taaaggcatt tggcgtaagc cgatgagtga
    30481 gggacgagag cgaacgccta acgacacgca cctgaatgtg tatttttacc cgaaaaccgc
    30541 aacagataat aaccgtattg agcgaatcca gcttgagcga ggctcaatcg gtacagattg
    30601 gacgccaaac gaggcagact taaaggcaga gattagtgca atccgcacta aactaatccc
    30661 tgtacggggt ggcaatgttg ctacaacctt aaatgcggct aagcggtcgg attggtttag
    30721 agaaatgcaa atcccttatc aaagtggttg ggggtattac acccaagcat ttcataactc
    30781 agggacgcaa cacaactaca gcaatttacc gctgacaggt cgttattatt ttatcgccga
    30841 actctatcat aactctggtt attctcactt gcgtatcacc tatccaagtt taaaacgcac
    30901 ctttgagagt gctatcaacc ttaacaatga ggatttgatt ctagattggc gtgaggtggt
    30961 gtttttaaaa gatggattgt atcaaggcac ttttaaaaca acaggcacac tagagtctgc
    31021 ttatcgtcta agagcggctc gtgatgatga acgttatcag ccatacctgc aaatggtcga
    31081 tatgggctat gaccttgcca atcccccggt aggaaaaaac aaaattattg gcagtgttga
    31141 ttattacgtt aaaaacggca caagcgagtc ttccaaagcg acgatgatgg cagcggcaat
    31201 gcctgacaag aacgtatttt gggaagtagc attgtggaat gcagcacagc aacggaatgt
    31261 attgtttaag gggtatagca agactaacaa tttgagtatt ggtaaaacca ccgacaatga
    31321 gcgagaccga gtacaagtca atggcacaat ccaagccacc gcaccggctg ataacgccaa
    31381 taacgaccaa gtgccgacta cggcttgggt gcgtaagatg gcaaagattt tagctgatgg
    31441 caaggtgagt aaagccggtg acacaatgac tgggcattta ttcatcaaga atggggaata
    31501 ctctgcggta catacctata acacaagtgg ttggttcgca aaatgggagg cggccccatt
    31561 atctgattcg cactttgctg ccattgtata tgccaacgac agagagacag ttatcaatcg
    31621 ggtgttaatt cccaagaaga atggcacagt cgctttaatt aatgatattg ccgataccgt
    31681 tagagccgct gtgagtcgta gtgataaatc ccgtagtaga acttttcctc tgcaaacggg
    31741 gaaaaaatat acaaccacag ggagcgttac gatttatcca gatggccgaa ttgtgcagat
    31801 tttccactta aaaaatatta aagcggcgtg gtttgattat gaggcaagtg cggtaggaga
    31861 taggcataga gttgtcaata tccctctttg gactgcgatg ccaaataaaa tttttgatgt
    31921 cgatgttaaa actgttcgcc cctcaaataa tgcctcaact tactacatag aagcggctga
    31981 atggctgagt gcgtggcaga tttacggtaa tgacacgaac aaatcaagtg tcaatattaa
    32041 tctatctcga ttcagaggtg gaaaggatga agatatggac ttgtatgtaa cagttgaggg
    32101 atattaaatg gcatattttg tgaatgtgat tgatgagcaa ggcaattatg agctaattga
    32161 tgatgagttt attgggctgt atccggattt ggattttaac acattaccca aactcacgga
    32221 taagcaatat cagacctacc ttgccaaagc aaacggcaaa gagcgatttg taaatggcga
    32281 atttgtgtat gagcaaatta aggtggatat gcaagcggtc atttccgctg aaaaatctgc
    32341 aaagttagca gagattaacc aaaaagcaca agcctttatc aatgatttag ccaaatacaa
    32401 cgaaacgcct aagtttgagc gtgatacttg gcttgagcaa gcgaaagagg caaaagcgtg
    32461 ggtggctgac ccaaccgtac aaacgccaac ccttgagtta attgcgcaaa tgcgaggcat
    32521 accgctcgac acgctacgcc aaaaagccta cgaaaaagcg atggcgtatc aaacggtggc
    32581 tgctattgta gcagggcaac ggcaaggata cgaagaccgc ctagaacaag cggaaacctt
    32641 agagcaaata caggcgattg agccgatgta tcaattaccg caaggagcaa acaatgagca
    32701 aactgactaa attaaaatcg tggagctacc acgtcttaat tgcaatagat caactcttta
    32761 acgctctcac cggtggagca gcggacgaaa cattttctag ccgttgctac cgtggtgcag
    32821 tgcttgcgga aaatccgaaa aaacgttggc gtttttggca ctcttttttg aattgcttat
    32881 ttttagaccc aaagcactgc tacgccgctt ataaagcgga ggtacaccgc aagcagtatc
    32941 cgaaggcatt tagacttggg gggatttaat gaaaaagcaa aacttaaaat tagtgcgggg
    33001 cgatgatgtg agttttagat tcagcattaa agacagcacc ggacaacctc ttgcgttaaa
    33061 ggatttgtgg tttgatttgc acttagtcag ctatcaaggt gaggtgctga ttgctctctc
    33121 tactgatgat ggcagtattg agacagcaga ggctggtcag atggtgttac attttagtca
    33181 ccagcaaact gctcgagctg aatggacaag tgccaattat gacttgcaac tcacgcacga
    33241 ctatacaaga gtctaggagg tggagatgac ctctatcatt gaactagacc tgactgatga
    33301 cctcatcatt gaggtgcagt tagatagcac aatcattacc ggcgatagct ttttagccaa
    33361 cctgccggat ttactccaaa tttacaacca agcaaagtca gatagcagta aggagcttaa
    33421 caatgactaa acacaaaaac cacgaaaacc acccgattgc tataacattc taccaacttg
    33481 gcaaagatgt cggcgacatt aaccgccggc tagcggttat tgagcaacgt gagcaatcag
    33541 cacagccaag ccaaccacaa gctgaggcgg ttacaatgcc acagcaagat gctgttgcca
    33601 ttaataacat caatgccgtt ttggaggcgg tcgaaaaata caaaactttt gaaaaataca
    33661 acactcagtg gcaagagcgt tttgaaaaat tcctgtctcg taacccgaat gattacgagt
    33721 taagtgaaga gcaacgccaa aaactttacc acacgatgtg ccagcatttg tggcaggtga
    33781 actttactga aatcaatagt aaacagtatg aattaccgat cccgcaacaa ttccagggta
    33841 agtttggcta tattgtcaaa acctcgggcg gtagcacaga aattagtttt gagttgctat
    33901 ctgaaactca cagcacttat ctttatccgg atagctatat tcccgagggc ggtggcgatg
    33961 taatgctcaa gccggcttat atttatttag tgattccgga cttagtggca atgcgtgagc
    34021 cggaggtggt gggggtttca ccgctgaaac tgaacattct gcagaaacac ctgctgacac
    34081 ctcagaaact acaggagcag aagcccttga acacgaaggc aaactgattg atggcgtatg
    34141 gcattttgag cgagagccgg taaatccacc gagagatcag aattattatg tggcaggtaa
    34201 cctgttctac aacggcatac cggattgata aattgatgtt tcagtaaacc taattagggg
    34261 ggaatccccc ttttttatta ttataaggaa agaaaatgaa taaatcttta gtagcgttag
    34321 ctgttgcagc gatggcatcg aaagcacaaa ctaaacagca agcaagcaag caagcaagca
    34381 agcaagcaag caagcaagca agcaagcaag caagcaagca agcaagcatt gtgagataga
    34441 gaaagtattt aaacaagctc ctttaccctt ttcagggcaa aaacggatgt ttttatccca
    34501 tttcaaacag gtgttaaatg caaatattga agcagacggg aaagattgga ctattataga
    34561 tgtttttggt gggagtgggt tgcttgcaca taccgcaaag cgtgagaaac cgttagcaag
    34621 agtgatttat aatgattttg ataattacgc cgaacggcta aaccatatca aagagacaaa
    34681 tcaacttcgc caagaaatct accaaattgt tgatgaaatt ataccaaaaa ataagagaat
    34741 tagcaatgaa attaaagcta aaatcatcaa taaaatcaat gattttgagg ggtttaaaga
    34801 cctcaaatgc ttaagttctt ggttattgtt tagcggtgag caagttgcaa ctttagatga
    34861 gttatttaag cacgattttt ggcactgtgt gcggcaaagt gactatcctg aagcaacggg
    34921 ttatcttgat gatattgagg tggttagtga gtcctttcat caattattgc cgagatttca
    34981 cgacaaagag aaagtattat tgattcttga cccaccttat ctttgcacaa gacaggaaag
    35041 ctataagcag gaaaattact ttgatttaat tgatttctta cggttgatag accttactaa
    35101 accaccttat atcttcttta gctcaaccaa aagcgagttt attcgcttta ttcactatat
    35161 ggttcaaaac agaaaagaaa actggcaagc gtttgaggga gcggaaagaa tagtggttaa
    35221 tgcctcggca agttataacg gcaaatatga ggataatatg gtgtataagt tctaaaaatt
    35281 taaacgccct ttgatagtga tttaaagggc gttaaaaaac cattaaaatt aagaaagtaa
    35341 agctcctgtt ttctttcgta gttttcgtgg ttgcgtttcg cagttttgtt ggctcgctac
    35401 aattactgtt cattgtaatg tttaatcgac cattggtttt gctaggatca gtttcaccaa
    35461 aataaccgtt aaaaccttgg acggtgcctt ctgctgcttt gattttttca gcaagtattt
    35521 gttgctttgc agcactttca tctgttacct tgagtacttc aaagtattcg ttttcacgaa
    35581 tgagaccagt agcaaagtct aaatcgatga aaactttacg cgcattaaaa atagctgtga
    35641 tctctgcaac gcttaaaggt tttttcaaac ggataaaatt agttggcaag tgtggaaaac
    35701 gttgatatgt gaaaatatct ttgtccaaat gacgagaaac ctgatctgga ctagtaattg
    35761 cttgaacttt cacttggtca attgttggac taactatgcc ggttagtgta atgtttgctg
    35821 tttgggctgt attatgattg acaaccatcg ctccttcatc gctattctga atacggcgga
    35881 acgtgagatc attgccgttg acatctaagc gcccaccacg ataaccaaaa tagatattgt
    35941 taggatccat ttgatctgat gaattgagga ttacggtagg tctgccactc acaataccta
    36001 gctctgaaaa tgcagatttt ttgttatttt catccgcttg ttgatttaat ataacagtgc
    36061 cgtcaccaac gctaacggag cctttgtttt ctcctttgcc gttgatagtt agtgtccctt
    36121 gtccgatttt tgataatctg tcaccagcag ggttactgat tttccagatc acatttttat
    36181 ctttatcaat atcaacaccg gctcctaacc aagtaatgcc tgctttcata ccttccacag
    36241 tggtattacc atgaaaatgg attgctcctg caccttggtt gatattctct gtgagactta
    36301 gcgtattgtt ttcacccaaa atatggaatg ttttaccgtg ttggagttga ggattccaag
    36361 ggttatcgcc tgtattacca ttatgacctt gaagtgttgg taatgaagta tctgctaaat
    36421 taactgtaag aggagcattc cctcctacga ttgagctggt attgccagaa ggtgtccaag
    36481 tgagtctagc accatttgca ttaatagcgc ctgcattatt ttctttttct aaagcacgta
    36541 cataatgtgg gtggtgatag ttccagtaag atttataaac atctccccca agcgtattat
    36601 tctctgagaa atagtcacta tatacaccta acacaaccca ttttttggta cgaacatcat
    36661 aaccaaaaag agcggagcca ctatcgccag gtaaaccgag agttgttaag ggaccgtagc
    36721 cgtggtcttt aaatacatcg tttatggtat tattttcagt ttttgctact aaaatacggc
    36781 tgttaaaatc gctgcctgga acgcttggat cgccattagt aacaggcaga acgctacctc
    36841 ctgtcaaaaa aggaccgtta ccgacttcaa tacgcccgtt gtttaagcga tctctttcgt
    36901 tgttaaccac tgcttgtcta ccagaaccgg cacgaataaa catggggaaa ataaaagggt
    36961 cgctaaatac actataaaaa tcttgtacat tttcggtagt gcgttcaatc tcattagctg
    37021 gagcgacttc agttactaat ttcgataacc taggtgcgtg gtagtcccag cggggcgttg
    37081 ggttacctga accatctaaa atcagttttt ctccttcgtc attacgttca cgtttttcta
    37141 tgcctttccc gagatctgtt ctttctttat ttggatcagg catatagtta ttacggcgca
    37201 ccacactata attgtaatga tggtcgtcgg ctttttcgct agatgaatca ccaaattgaa
    37261 tgtcccgata gccttggttg tggtttacac taataacgta ttgtggatta actaatgttg
    37321 caatccctgt ttgacgagta atggaagaga agtcaatcat tggaatagac atagtctcac
    37381 ctgttactgt ttcaaaaaca ggtagatcat tagagtcttc atcacctcca ccatagagaa
    37441 attcataaca accgggtaaa ctttcattat caaagcattc agataggctt acattcggct
    37501 taggtgaaat atttgattcc acttcaacct gcttagttgg tgtaacctgt aaaaaagtac
    37561 cgatgttttt gcccgtttta tcaataactg gaatattggt tgccccaaca aaaaatttgc
    37621 ctttattttc tgctaaatca cgaaaatatt gataatcgac atcaccacgt acaatagatg
    37681 ccagtaatgt tggtgaaaga gaaatagcaa ttgatgttgc tagaagagag agcttgaaag
    37741 tatgcttcat tattatttga aacctgtata aatatgtaag tagatcagat ttgagcgcta
    37801 ttaaaaagat tatttaaatc gattaaatat tcatttaaat accacacaat tattcagcgc
    37861 gattatcttg ttcggcataa atctgctcaa tacccaaata aggtaataat taaaataata
    37921 ggggatattt agtagtaaca tagagaagag aaaagagtct ttattatgtt atttagagaa
    37981 taattttgcg attattactt ttgcaaagtt tttcactttt tcgaccgctt gttaaataaa
    38041 aagggcgaaa aatgtttcgc ccctaccgat tactcttgtg gaattgtacg gattgctaac
    38101 tcttccaacg ctttcggatt cgcatagctt ggtgcttctg tcattaaaca cgctgcagcg
    38161 gtggttttcg ggaaagcgat gacatcacga atgttatcag ttcctgtaat caacatcgtt
    38221 aagcggtcta aaccgaaggc taagcctgcg tgtggcggag taccgaattt taacgcatct
    38281 aataagaaac cgaatttctc tttttgctct tcttcgttaa tgcctaaaat gctgaacacg
    38341 gtttgttgca tctgctggct gaaaatacgt accgagccac cgcccacttc gtagccgtta
    38401 attaccatat cgtaagcgtt tgccaccgca ttttccggat cttgcactaa ttcttccggc
    38461 gataattctt tcggtgaagt gaacgggtgg tgcattgccg ataagttgcc ttcatcatca
    38521 cgttcaaaca ttgggaaatc aatcacccat aacggtttcc acgctgtggt atcggttaag
    38581 cctaaatcgt tccccacttt taagcgtaac gcaccgatgg cgttagtcgc aacgtgccag
    38641 ttatccgcac cgaagaatac aatgtcgtct ttttgcaagt ttaagcgttt aactaaggct
    38701 tttagcactt cttcatttaa gaattttgca accgggcttt gaatgccttc taaacctgtg
    38761 ttcatatcat tcacttttaa ccaagccaag ccttttgccc cataaatgcc gacaaattgg
    38821 gtgtagtcat caatattttt acgggttaga gctgcaccgt ttggcacacg aagtgccact
    38881 acacgccctt tcggatcatt cgccggaccg ctaaatactt tgaaatcaac cgattttaaa
    38941 atatctgcca catcaaccat ttccagtggg ttacgcaaat ccggtttgtc tgaaccgaaa
    39001 cgggtcattg cttcattcca cgtcatcatt gggaatttac cgagatcaac gcctaaggtc
    39061 tctttccata agccgtggat catcgcttcc attaatgcac gcacttcttc ggcagtcata
    39121 aagctggttt ccacgtctat ttgggtaaat tccggctggc ggtcggcacg caaatcttca
    39181 tcacggaaac atttcacgat ttggtaataa cggtcgaagc ccgacatcat tagcaactgt
    39241 ttaaatagct gaggtgattg tggcagagca tagaatttgc ctttatgcac acggcttggc
    39301 acgaggtaat ctctcgcacc ttcaggagta gctttggtca gcatcggggt ttcaatgtct
    39361 aagaaaccgt tatcgtccat aaaacggcgg acaaaactgg tgattttagc acgggttttg
    39421 agcttttctg ccatttcagg gcggcgtaaa tccaaatagc ggtattttaa acgctgttct
    39481 tcggtattgt tttgattgaa gtctaacggc aatacttcag cgttgttata caccactaaa
    39541 ttttttacta acacttcaat ttcaccggtt gccatctctt tattgatttg cgattcatca
    39601 cgggcaatca cttcaccttg aatttgcacg cacgcctcag aacgtaaggc cgatgcttgc
    39661 ttgaaaagtg cttcatcttt ctcatcgaaa aacacctgca caatgccttc acgatcacga
    39721 atttgcataa aaataaaacg accaaggtta cgaacacgat gaacccaacc gcttaaggta
    39781 actgtttgtc caaggtgtga gcggtttaat gcaccgcagt agtgagaacg catcataaaa
    39841 ttatcctttt gaaaataaat atcccaagtt tcggggaaaa cttaaggatt atagcggaaa
    39901 attcagcgaa gatggataaa taaaagcaaa caagcggtga tttatccttc cagcccaata
    39961 aaaacggcta ataacaatgg agcggctaaa ttaacaataa aaccgaagct gattgccagc
    40021 ggcacaattt gaataccgcc cgatttttga ataataggga gcatacaatc taatgaagtc
    40081 gctccgccaa tgccgactgc ggtggacgga aattgacgca taaacagtgg tactaaaaac
    40141 aggcataaaa tttcacgcga gatgtcgtta aaaaaggcaa tactgccgta aatcgggccc
    40201 caagcatcgt ttaccaatac gcttgaaagg gaataccaac cgaatgcaga ggcaaaggtt
    40261 aagcctttag caagggataa atctaaggtg aatgccgaaa tcacgccacc aatcagggaa
    40321 cttgccacca ttacaatcga ggtataaatc ccccgcttgt taaagaacac ttcacgcagg
    40381 ggaataccgc tgtttcgcag ttgaatcccc accccgaaaa tcatcacttc taacacatag
    40441 gtgctggcgt gcagagggaa atccaccacg cctttggtga aatagccgat gatcccgcct
    40501 aataaggtaa tgccgattaa tttaaaggaa tcaatcaaca aatgcaggcg ggagggaagt
    40561 tgatcttgat tgactttgtc tcttttcatc ggttgtaatt tgtcgtaaat caccaagccg
    40621 ataatgtttg aaaggagtaa aatcaccact aaactaaacg ccgtaccgcc aatctgtggc
    40681 agttcggtga gaatgttatc aatttgtccg agagaaatcc ccatcactaa taaaatcaag
    40741 taaaggcaga ggctgaccac tctgtttact attgccatat ggcggtggtt tttgagggtt
    40801 attaagtaac cgagaaaaag tggaatcagc acaatggcta aaccgtagag cattttttat
    40861 cctttttatc gctattttta aacttgaaat tctaacaata agggcataaa ataaaactgt
    40921 ttttatatac agttatttgt gttgcaagcg gtcgtttttg gggaaaatat tgcaaatgtc
    40981 gattcaagct aaacataagc gaaaaattat ccatattgat atggattgtt tttatgcagc
    41041 ggtcgaaatg cgggaaaacc cggcgttggt cggtaagccg gtggcggtgg gcggcaatgc
    41101 taatcaacga ggtgtgctga caacctgtaa ttacgaggct cgaaaattcg gcttacacag
    41161 tgcaatgcca acggcaactg cgttgaagaa atgcccgaat ttaattttat tgccggtgaa
    41221 tatggcgttg tataaatcgg tttccgctca aattcacgaa atttttcatc gctatacgga
    41281 tgtgattgaa gccttgtcgc ttgatgaagc ctatttagat gtaaccgaat gcgaacgcta
    41341 ttttggctcc gccacttgga ttgctcaagc aatccgcaat gatattttca atgaattgca
    41401 tttaactgcc tcggcaggag ttgctccgct taaattttta gcaaaaatta cctccgatca
    41461 aaacaaacct aacggacaat gtgtgattac gcctgatgat gtgcaaaatt ttgtgaaaaa
    41521 tctaccgctt gcaaaaattc cgggtgtggg gaaagtaacc aatgaaaaat taaaacagct
    41581 tggctttgaa acctgtggtg atattcagca agcagaaaaa gcggttattt accgagcgtt
    41641 tggcaaattc gggcaacggc tttgggattt tagccacggt attgatgaac gagcggtaga
    41701 gccttatcgt gaaagaaaat cgctggcggt ggaaaatacg ctgttgcacg atatttcaac
    41761 ccttgagcaa gcggaaaaga ttgtggcaga tttattcgac aaactggttt ttcggttgca
    41821 acgaaactgg ggcgatacgc cattaactga gtttaaaaag ttaggcatta aactcaagtt
    41881 tgatgatttt agccaaacca cgcttgaacg aaccaccgat ggctttgcgt atgagcgatt
    41941 tggcgagttg ctacagcaaa tttttacccg aagaaaggaa cgaaaggtgc gattaatcgg
    42001 tctaagtgtt cactttcccg agaaaaaagt gaataaacag ttaaatttgt gggaataatt
    42061 gtaaataatg acttgaaatt aaggctaaag tcattatctt attcgtgcaa tcattgcatc
    42121 tatatttttg gagattgaaa acattatggc aaaacgtgtc attctatttt tattaactaa
    42181 cttagcgatt acctttgttt tagggatcgt attaaacctt atttttaaag tgaccggcat
    42241 tcaagggcaa agcactgccg gtattttggt gctttcgtta gtcttcggtt tcagtgggtc
    42301 tttaatttcg ctatttatgt cgaaatcaat ggcattgcgt tcggttgggg cagaggtgat
    42361 tacacagcct cgtaacgaag cggagcaatg gttattcaac actgtacaac gtcaggctca
    42421 gcaagcgaat atcccaatgc cggacattgc gatttaccat tcggctgatg taaatgcatt
    42481 cgctacagga gcaacgaaaa gtaattcttt agttgcagtc agcaccggct tgctgaattc
    42541 aatgactaaa gacgaagctg aagcggtagt agcacacgaa gtggcgcaca ttgcgaatgg
    42601 cgatatggtt acaatgactt tattacaagg cgtgttaaat actttcgtca ttttcttagc
    42661 tcgtattatt tcgacaatgg cggcaagttc acgtgacgaa aatggcaatt caagcaccaa
    42721 tacgctggtg ttctgggtag tagatattgt gttacagatg gtgtttggtg tgttagcaac
    42781 aatgattgca atgtggttct ctcgccaacg tgaatttcgt gcagatgcag gctctgctca
    42841 attagtcggt aaagagaaaa tgattgcggc attacaacgc ttgcaacgtg ttcacgaacc
    42901 gcaagaaatg gaaggctctc ttgctgcctt tatgattaac ggtagccgtg gtaaagagtt
    42961 gtttatgagc caccctccgt tagaaaaacg tattgaagcg ttaagaaact tataaagcac
    43021 aagcggttgt ttttgtaaaa ttttttgcaa aacagccgct tttgttttct ataaaatatg
    43081 cggtaacacc gaatagagag ttgccagcaa aaacagataa cgtaacaatt tcccaatcac
    43141 aataaagaga atgctttgcc aaaggctaaa ccgtagccag ccggcaatgc cacagaaaat
    43201 atcgcctaca atcggtaacc aactaaaaag caagactaac acgccatatt tttcactttt
    43261 ggctaatgcc cattgtgaat aacgattggt agtattctgt gggcgaggga gtaatagccc
    43321 tatcgcataa gtggttatgc tacctaaact attacctaag gttgcaacca agagtaaatt
    43381 gaacagtgaa aatgaggata aagagccata agtgatgaga tgttggcttg ctaaggtagt
    43441 gaagataatt tcagaatttc cgggtaagag ggtagcgctt agaaatccac tcagaaacat
    43501 agtaaagagt tgattttgtt cggaaaagaa taaactgaaa aaggaagtga gatattctgt
    43561 cataaaattg tagttggttt gttattaaaa tgtagttata aattttcttg aatgttgtgt
    43621 tttttatgga ttttgttcta tatcaaaaaa agacatcgaa atacctctga ttgtgtaata
    43681 tttttatttg aagattatct caagaggtct ataatttcta cataatatat cggtttttca
    43741 attctcattg ttaaggttgt ctgatgtttt ctcctgctga aatggcaaaa atcgcagaag
    43801 atggtgcggt ttataaagca acaaaaaatc aattatattc ctttctctct gccattactg
    43861 cgggcggttt tattgcaata gcatttgtat tttataccac aacccaagtg ggtgcgagcc
    43921 aaatgccttg gggtatggct aaactgattg gtggtttggt attttcactc ggcgtgatta
    43981 tgtgtgtggt gtttggggca gaacttttta cctcatcaac acttacgatt gtagccagag
    44041 ccagccaaag aattaactgg ttacagatgt ttaaaaactg ggtagtggtg tatttcggta
    44101 actttgttgg ggcgatttcc attgtattgt tgatttggtt tagtggtcag attatggcag
    44161 ccaaagggca atggggtttg gttattttaa ataccgcaca gcacaaaatt caccaccaat
    44221 ggtttgaggc tttctgttta ggcattttct gtaacattat ggtgtgcatt gcggtgtgga
    44281 tgtcttatgc aggtaaaagc ctaaccgata aagcctttat tatgatgtta ccgattgcaa
    44341 tgtttgtggc ttccggcttt gaacactgtg tggcaaatat gtttatgatt ccgatgggga
    44401 ttgcgatttc gcactttgcc agccctgaat tttggacagc aattaatgtt gacccaacgc
    44461 aatttgccga tttagatgta tctcattttg tgtttaagaa cttaattccg gcaacgctgg
    44521 gtaatattgt cggtggcgtg tttttcattg gtttaatgca gtggttctta tacattagaa
    44581 agcattaaga tttcagattc aagcggtcaa attttgcaaa ttttttgcaa aaaatcaccg
    44641 ctttcccgtt ttaacttact aacacagagg acttaaaatg actcaactaa cagacgctca
    44701 acaaaaagcg tgggaaggtt ttgccgcagg cgagtggcaa actgaagtaa atgtacgtga
    44761 ttttatccaa aaaaactaca caccttatga gggtgatgag tctttcctag ctgaagtaac
    44821 acctgcaacc agcaaattgt gggcagatgt gatggaaatg atcaaagtag aaaacaaaac
    44881 acacgaaccg tatgatattg actgcgacac gccatcaacc attacctcac acgcaccggg
    44941 ttatattgat aaatcgttag aaaaaatcgt tggtctgcaa acagatgctc cattaaaacg
    45001 tgcgattatg ccgtttggtg gtatcaatat ggtgaaaggt tcgtgcaaag tttatcgccg
    45061 tgagcttaaa cctgaagtag aacaaatctt taccgaatac cgtaaaaccc ataaccaagg
    45121 ggtattcgat gtttacactc cggatatttt acgttgccgt aaatcaggtg taattaccgg
    45181 tttgccggat gcttatggtc gtggtcgtat tatcggtgac taccgccgta tggcacttta
    45241 tggtgcagac ttcttaatga aagacaaaca acgccagttt gcctcattac aagctcgttt
    45301 agaatccggc gaagatattc aagccacgat tcaactgcgt gaagaaattg ccgagcaaca
    45361 ccgtgcttta ggcaaaatga aagagatggc tgcaagctac ggttttgata tttcaggtcc
    45421 tgcaaccaat gcacaagaag cggtgcaatg gacatatttc gcttaccttg cagcggttaa
    45481 atcgcaaaac ggtgcggcga tgtctttcgg tcgtgtgtct tcattcttag atatttatat
    45541 cgaacgtgac ttaaaagccg gcaaaattac cgagcaagaa gcccaagagt taatcgacca
    45601 tttagtaatg aaattgcgta tggtgcgttt cttgcgtact ccggaatacg atcaattatt
    45661 ctcaggcgac ccaatgtggg caaccgaaac cttagccggt atgggtttag acggtcgtac
    45721 cttagtaacc aaaaacagct tccgtatttt acacaccctt tacacaatgg ggccgtcacc
    45781 ggagccaaac ttaactattc tttggtctga acaattaccg gaagcattta aacgctactg
    45841 tgcgaaagtg tctattgata cttcatcagt tcaatatgaa aacgatgact taatgcgtcc
    45901 ggatttccaa aacgatgact atgcgattgc gtgctgcgta tcgccaatga tcgtgggtaa
    45961 aatgatgcag ttcttcggcg ctcgtgcaaa cttagcgaaa accttgttat acgcaatcaa
    46021 tggcggtgtt gatgagaaat caggcgacca agtagggcct aaaactgaag caattacaag
    46081 tgaatactta gattacgatg atgtaatgac ccgcttagac agctttatgg attggcttgc
    46141 aacccaatat gtgacagcac tgaacattat ccactttatg cacgataaat atgcatacga
    46201 agcggcatta atggctcttc acgaccgtga tgtgttccgc acaatggcgt gtggtatcgc
    46261 agggctttca gtagcggcag actcactttc agccattaaa tatgcgaaag taaaaccaat
    46321 ccgtaccgat attgaaatca aaaacaaagc tggcgaagtg gttggtgtag cgaaaaacgt
    46381 agcaaccgac tttgaaattg agggtgaata tccgcaattc ggtaacaacg ataaccgtgt
    46441 ggacgacatt gcagttgatt tagttgaacg ttttatgaag aaaattcaaa aactcaaaac
    46501 ataccgcaat gcaacgccga ctcagtctgt gcttactatc acttctaacg tggtatatgg
    46561 taagaaaacc ggtaatacac cggacggtcg tcgctcaggt gctccattcg gaccgggtgc
    46621 gaacccaatg cacggtcgtg accagaaagg tgcggtagct tcattaactt ctgtggcgaa
    46681 attaccgttt gcctatgcga aagatggtat ttcttatact ttctctatcg taccaaatgc
    46741 gttaggtaaa gattacgaag cccaaaaacg taaccttgca ggcttaatgg acggctactt
    46801 ccaccacgaa gcaactgtag aaggcggtca gcacttaaat gtgaacgtgt taaaccgtga
    46861 tacattatta gatgcggtag aacaccctga aaaatatccg caattaacga ttcgtgtttc
    46921 aggctatgcg gtacgtttca actctttaac caaagagcaa caaatggacg taattacccg
    46981 caccttcact gaaagtatgt aattacaatt tgcaaaactt ttagccacaa aacgcattgc
    47041 gttttgaacg ttggctttgc cgacggctcc gtaggagcga acaaaattgg aaacaatttt
    47101 gtgagtaata atcaaccgct tgtagcattt atgccgcaag cggttttttt gtgatctcgc
    47161 tcgaaaaatt ggctattcat ttacacagct ttcgtaatat tgtttataat tacagtgttc
    47221 tatatgggag aaagagatgt ctaagcaaga tttaattcgt tcctctgtgg cggaatacct
    47281 cacttttatt acagctaccg gcgaaagcca agttgatgcc gtttacgccg atgaaaatgt
    47341 atggcttagc caaaaaatga tggcggtgtt gtatgatgtt gatgtacgaa ccattagcta
    47401 tcatctcaaa aaaatcttta gtgacaatga gttagctgaa aattcagtta tccaattttt
    47461 ttggataact gcccaagacg gcaaaaacta ccacaccaag cattataatc tgtcggcaat
    47521 tattgcggtg ggttataaag tcaattccga gcgagcggtg cagtttcgca aatgggcaac
    47581 cgaaatcgtg catagctttg cgattaaagg ctttgcgatg gacgatgaac ggctgaaaaa
    47641 tgacggcacg attttgggca aaaaatactt tgaagaacag cttgctcgta ttcgggaaat
    47701 tcggttatcc gaacgcaagt tctaccaaaa aatcaccgac atttacgcta ccgccgtgga
    47761 ctacgaccgc accgcaaccg ccaccaaacg cttttttgcc accgtgcaga acaagctcca
    47821 ttgggcaatt cacgggcata ccgccgccga gctgattatg gcacgagcca acgctgaaaa
    47881 gccgaatatg gggctaacga attggaaaga cgctccgcaa ggcaaaattt acccctttga
    47941 tgtggtggtt gccaaaaatt atttatcgga taatgaatta gcacaactac aacggctggt
    48001 ctctgcctat ttggatatgg cggaagatat ggcagaacgc caaattccga tgacaatggc
    48061 agactgggaa acccgcctta accgctttct tgccgccacc gaccgagaaa tcttacaaga
    48121 tgccggcaaa gttaccgctg aaattgctaa atctttcgcc ctcagcgaat ttgaaaaata
    48181 ccgagtcaag caggatctca cctacgaaag cgatttcgac ttactggtaa aagaggtcgc
    48241 cgccaaatac cacgccggct aggtttgcaa agttttcaga aaaaccgact gcttgtaagc
    48301 ggtcaaaata gctttaaaaa atgcaaaaat ttaaacatat ttggttgata tgttgatgga
    48361 gtcaatagat taataaaagt ttattcctga aataggcaaa aaatagtatg actttctcct
    48421 ttcttaaaat ataccggtgt gatttatttc tgcgaacaac ataaaaattt gctacaattt
    48481 ctcaaaattt tttgagggtt gaggtgacaa atgtctgttg ttggacgtat ccattctttt
    48541 gaatcctgcg gtacggtaga tggaccgggg attcgtttta ttctgttctt gcaaggctgt
    48601 ttgatgcggt gtaaatattg ccataatcgt gatacttggg atcttgatgg tggtaaggaa
    48661 attacggttg aagagctgat gaaagaagtc acgacttata agcattttat gaaagcaacc
    48721 ggcggtggtg taacagcttc gggtggggaa gcggtgttgc aaatggagtt tgtgcgggat
    48781 tggtttcgtg cctgtaaggc tgaaggcatt aatacctgct tagataccaa tggttttgtt
    48841 cgccattata gcccggtggt ggatgaaatg cttgaagtga ccgatttggt cttgctggat
    48901 ttaaaacagc tcaatgatga agttcaccaa gatttagtcg gggtgtcgaa taagcgtacc
    48961 cttgatttcg cccgttatct gcacaaatta aataaaccga cttgggttcg ctatgtggtc
    49021 gtgccgggtt atactgatga cgatgattct gcccatcgtt tagggcagtt tattcaagga
    49081 atggataaca ttgagaaagt ggaacttctg ccttatcatc gtttaggggc tcacaaatgg
    49141 gaaaccttag gctataaata tgagctggaa ggggtaatgt caccgcctaa agaggattta
    49201 gagcgtatcc aaaaaatcat tgaaagttac gggcatacag tcaaattcta aagacaagcg
    49261 gtcatatttt gtgatttttt tgcaaaaaat tattgaaata tgaccgcttg ttttcttttc
    49321 tctctcactt tgtgtattat cttgatacga attttcattt tgaccataaa aggaaaaaat
    49381 aatgtctaac cctcttttaa attacacagg cttgcctgcg ttctcacaaa tcaaacctga
    49441 acatatcaaa ccggcggtag aagcggtgat caaagaatgc cgtgaaactg ttgaaaaagt
    49501 cgcacaaatt gaaaacccga cgtgggaaaa tttctatatg ccacaagcaa tggcagagga
    49561 taaattctcc cgtgcgtggt caccggtagg gcatttgaat gcggtgaaaa attccccaga
    49621 gttgcgtgag gcttaccaag cgtgcttgcc gttattatcg gaatacagca cttgggcggg
    49681 gcaacatcaa gggttatatc aaggctatgt gaagttaaaa aacagccctg agtttgaaac
    49741 ttattcggtt gcacagaaaa aggcgattga aaacagctta caagattttg aattatcagg
    49801 catttcactg ccggcagaga aacaaaaacg ctacggggaa atttctgcac gcttgtcgga
    49861 actcaactcg caatttagca acaacgtact tgatgcaaca atgggttggg atattgtaat
    49921 taccgatgaa gcacagctta aaggcttgcc ggaatcggca ttagaagcgg caaaattatc
    49981 cgcagaaagc aaaggtaaga aaggctatcg cttcactctt gaaatcccaa gctatttgcc
    50041 ggtgatgacg tattgtgaaa acaaagcact gcgtgaggaa atgtaccgtg cttatgtgac
    50101 tcgtgcttct gatcaaggcc cgaatgcagg caaatgggat aacagtgcgg tgattgatga
    50161 gatcttaaaa ctgcgtcacg aaaaagccca acttctcggc tttaagactt attctgatta
    50221 ttcattagcc accaaaatgg cagaaaatcc acaacaggta ttagatttct tgaacgattt
    50281 agccgctcgc tcgaaagctc aaggcaaaaa tgaattatgc gatttgaaaa aatttgctaa
    50341 agcccatttc ggcattgaac atttggattt atgggatatt ccgttctaca gcgaaaaaca
    50401 aaaacaggca ttgtattcgg tcaatgatga agaacttcgc ccgtatttcc cggaaaatcg
    50461 cgtattatca ggcttatttg aagtaattaa acgcattttc ggtatgcgtg tggaagaaca
    50521 aaaagatgtg gatgtatggc acaaagatgt acgttttttc aatatttttg ataaaaatga
    50581 ccgcttgcgt ggctcgttct acttagattt atacgctcgt gaaaacaaac gtggtggggc
    50641 gtggatggat gattgcatca accaaaaacg cttggctgac ggcacattac aaaaaccggt
    50701 ggcatattta acctgtaact tcaataaacc gattggcgat aaaccggcat tgtttaccca
    50761 cgatgaagtg acaactttgt tccacgagtt tggacacggc attcaccata tgctaactga
    50821 aattgacgtg ggcgatgtcg ccggcattaa cggtgtgccg tgggacgcag tggagctgcc
    50881 aagccaattc ttagagaact ggtgctggga agaagaggca ttagccttta tttcagggca
    50941 ttatgaaacc ggcgagccgt taccaaaagc gaaattagag caattattgg cggcgaaaaa
    51001 cttccaagcg gcaatgtttg tgcttcgcca attagaattt ggcttgtttg atttccgcct
    51061 acacaccgaa tatgacccga gcaaacaagg acaagtgtta gccttactta aagaggtgaa
    51121 agaccaagtc gctgttgcca aaggcgtaga gtgggcgaga acgccacaca gtttctcgca
    51181 tatttttgca ggcggctatg cggcgggcta ctacagttat ttatgggcgg aagtgctttc
    51241 agcagatgcc tattcacgct ttgaggaaga ggggattttc aaccctgaaa cggggcagtc
    51301 tttcttagat aatatcttaa cccgaggcgg ttcagaagag ccaatggtgc tgttcgaacg
    51361 cttccgtggg cgtaagccaa cccttgatgc cttgctcaga cacaaaggca ttgtaggtaa
    51421 tgccgagcct gttgattgca ctcaataaag taaacacgtt ttacaagcgg ttagatttgc
    51481 aaattttttt gtaaatttga ccgcttgtct tttctttctt ttgcaactcg ttataatttt
    51541 cagcatttag cctgacagag agtgaaataa tgtctttaga tttagccgat attcgaaccc
    51601 aaataaccaa cttagaccgc aatttattaa agctactggc agaacgccac cgcttagcct
    51661 ttgatgtggt gcggagcaaa gaaatcacac aaaaaccctt gagagattta gaacgggaaa
    51721 agattttgct tcaagaactg gtaaattttg ccgaagcgga gaattaccag cttgatccgc
    51781 aatatgtgac ccaaattttc caacgtatta ttgaagattc agtgctgact cagcaaaatt
    51841 atctgcaaaa taaattgaat gcacaaaaag aagagcaggt ttcgattgcg tttttgggaa
    51901 tgcgaggctc ttattctaat atggcatctc gacagtttgc caaaaaatat caaggcacat
    51961 tggcggaatt aagctgccat tcttttaatg aagtatttga gaaagtcagc cttggtgaag
    52021 ccgattttgg cgtactgccg cttgaaaaca cgacttcagg ttcgatcaat gaagtgtatg
    52081 atttattgca gcataccgat ttaaccttag tgggtgaatt ggcgtaccca atcaaacatt
    52141 gtgtattggc aaacggcacg gttgatttgg cggaggtgga taccatttac acccaccctc
    52201 agcctgccca gcaatgtagc caatttttag ccgggctaga taaagtacat atcaaatatt
    52261 gcgaaagcag ctcgcacgca atgcaaatgg tggctcgctt gaataagccg aatattgttg
    52321 ccttgggcaa tgaagatggc ggaaaattgt atggcttgac gaatatcaaa accgatattg
    52381 ctaatcaagc tcacaatatc acccgtttta ttgttgttgc caaagaggct gtgcaggttt
    52441 cgccacaggt acaaaccaaa acgttactgt taatgaccac cacgcaacag gcgggtgcat
    52501 tggtcgatgc gttaatggta ttcaaaaatc atcatattcg tatgatgaaa ctggaatccc
    52561 gcccgattta cggcaaacct tgggaagaga tgttttatgt ggagctggag gcaaatattc
    52621 attccgagaa cacccaaaaa gcattggcgg aattggagca agttaccagc tacctcaaag
    52681 tgttgggttg ctacccaagc gaaattattg agccggtaaa actgtaatat tgtctaatat
    52741 gaccgaaatt aaagctcaga atattttctg agcttttact ttaggttaag ccgattcttg
    52801 ttttagaatt gcataaagtt ggtcttttaa atgcaatttt tcttttttta gtgcctcaac
    52861 ttcttcatgt gttgccagtt caatatttgc ctccatattc ttaatacgct ggtctagctc
    52921 attatgttta tcaaataagc gagcaaaatg tgaattgttt tgctttaatt gggttatgag
    52981 atcacgaaat tctggaaaca tatttaactc ctaatagtgg ttgcaaattt tacttgatta
    53041 aatactagca tttttttgtt gatttactgt taaatctttc tatttttttg aacttgatca
    53101 caaaatttat atcgaaaatt ataatgtgtg tgagccatat ttaaggctat aataatgagt
    53161 aggaatttta gatttaagga cacaaaaata atgagctata aagtggtctt ttcgctgttg
    53221 ttttctctat ttttatcaac agcaaatgca aattggacaa aaattaatga tgtgaattat
    53281 acgtgggggc catttaatat ttaccatatt acgcttttta ctgagagcgg tacttatgta
    53341 gaaggtacac gtcctttaat gcttactcta caatataaaa aaccgtggga ggggcgtgat
    53401 tttgcggttt ctttagcaag aacttggaat aatttaggca ttaagctacc tgaaaaagag
    53461 ttagatgagg ttattaccca cctgagaaaa actttcccag atattaagcc tgaagataca
    53521 ttgcactata ttgcattaga agatagaggt tattttattt taaatgataa agtagtctct
    53581 gatgtgttta ataaagcttt caatgatgct attgtagcaa tttggcttga tccgaaaatg
    53641 gatattagcc atcaattact tgatccatct tataaaccga gagcagaggc agaaagtatt
    53701 aagccacaag tagaggaaag agtagcggaa aacttacaag aacctatcgt aaatactgaa
    53761 gtttctaaag agctgaaagc ggattctcaa gcagtagagc aagcaccaaa caaaatagat
    53821 atacctgtag cagataaaac tcaagctagt gtggtaaatg aagcgactca accggtagag
    53881 aataaagata agaaagagcc agaaaagcta gaagaaaaac caaaggagat gaagattgaa
    53941 aatccggaag tgtttatttc accgatttat gatgatatct taatgctcac caaatattgt
    54001 gtttaagcaa agaacaagcg gtaatattct cgaaaaatat taccgcttgt tcattttaat
    54061 aatccattta agataaaatt ttcgctaact cagcacttac ttcttccact ggttttgttc
    54121 catctaaacg ctcataacga gtgttgccgg cttctgcttc tgcggtgtag taggcgatta
    54181 acggtttggt ttgtttgtgg taaatcgcta aacgctctaa taccgtttca ggtttgtcat
    54241 cttggcggat aattaaatcc tcaccagtca catcatcttt gccttccact ttcggtggat
    54301 tgtacaccac gtggtaagta cgccctgaag gttggtgaac acgacgacca ctcatacgct
    54361 caacaatgac ttcatcagct acatcaaact ctaacactaa atcaattttt acacctgact
    54421 cttttaacgc atcagcttgc ggaatggtgc gtgggaaacc gtctaataag aagccattag
    54481 cacaatccgg ttgagcaata cgatctttta ctaaggcgac cgttaattca tccggcacta
    54541 acttgccttc gtccatcaat gcttttgctt gtttaccaag ctcagtgctt tctttaatcg
    54601 ctgcacggaa catatcgccg gttgaaattt gcggaatacc gaatttgttc ataataaact
    54661 gagcttgcgt acctttgccc gcacccggcg cacctaataa aatcactttc atttgaaaac
    54721 ctcaattaaa ctaaaaataa taaaatcact taggcagtaa ccttaccgat tactgcctaa
    54781 aattgcaaat ttttttaatt ttttgaccgc ttgttatacg gaattagaat tcatagcgta
    54841 aatttaagcg tgtatagaat ggctcaccgt agctatattg gctaaagctg agggcgttac
    54901 gatatttttt atcgaataag ttatcaatgt taagctgtgc tgagaagttg tcattaaatt
    54961 gataacgagc catcaaattc actaaagtgt aagctttttg accatattcg ccataagtag
    55021 cgtgtttggt ataaattctg ctttgccagt ttacacctgc tcctaccgtt aaaccttgca
    55081 ctaaacggtt catatcgtaa gttgcaaaga gtttaaattg tttgcgtggt tgagttgtgt
    55141 taattgggtt acctgaagca tcatcgcctt tccactgagt atatcctgca ctgagtttta
    55201 atttttcagt tacatttcca gatgcttcta cttcaaagcc tcgaactttc gcacctttag
    55261 aggctgtgta gtaggctaat aatgtattag ggttaatacc ggcagattga gctagattat
    55321 cttgtcttgt ttcaaatacg ctaatttgag tttgcaagtt gtcattgaaa taactccctt
    55381 tccaacctgc ttcgtaggtt tcgcccgtaa caggagagag tagtttgtta ttgatgtcca
    55441 cttgactttg tggtttgaaa atatcggtat aacttacata aacggtattt tgtggattaa
    55501 tatcaaaggt taatcctgca taaggtgtcc aaacatcgtt agcgtggaag ttttgtgttg
    55561 aaccatagaa agtgccttct gtgcggtacg atgaaatacg agaacctaga agcatagaaa
    55621 gtctatctgt aagatgtaaa cgggtagaaa catacacccc gaactctttt aagttttggt
    55681 agtatttttc agacatactt ccccagtttg gtctagcata aatgccattc caattattaa
    55741 agtcgaaagc tccgtcaaag gtgctattat cggcagcgta ggaattacga tgtgctcgat
    55801 tgtattgaat accgattgcc gcatcgtgtt ctaatcccca agcagagaat gaaccggtaa
    55861 gatcaagctg cacattagat tgtgtattat catttttaaa tttacccggc caaggcgacc
    55921 aacctaatcc atcttggcga ttaagtgatg agccgctgaa atagaaaagt tctgaattat
    55981 gtttgcctac acggtaattg ccttttaatg caagttccca tttttcgcct agtttttgtg
    56041 taatatcggc aaaatagttt acggattcat tatcccagta agcccattcc ggactggcat
    56101 ttttgcttct gctccagtta gtttcaccac cgtcgctata gaatgcgggt aaaccacccc
    56161 aaagtgctgc atcacgtttt tctttttgat agcttacacc taacccaagt ttggtagtgt
    56221 cagttaagtc tgcttcaata ttgccataaa gcgtggtgta acgttctttt tcatttttaa
    56281 tgaacgtatt accgttttta tgctctgcaa taaagcggcc tcttactgat cctgaattat
    56341 tcaatgcttg gctatggtca atcattgtat tgaaatcagc ataacgcccg attccagctt
    56401 ctaaaatagt ataacgggaa atgctattgg ctcgtttacg aacaagatta acacttgcag
    56461 aaggatcgcc tgccccagta gttaagcctg tagcaccacg cacaacttct actcggtcgt
    56521 ataacacgct gttgcctgta ttttcgcccg ttgtccattg gttatttact tactttgaga
    56581 tccataccat ctaccttgac tttatcaatc ccaaaaccac gagcactgaa agaatagcgt
    56641 cctctgtcaa gtaaagaaac agaaacaccg tgagttgctt caagtgcttt ggcaatcgta
    56701 ttaagatttt gatctctgat ttgttgatgc gttacagccg ttacgctttg tggcgtgtct
    56761 ttcgcactca atgccattcc attagagcct ttggcttttt tctgtgcata acgtccagtt
    56821 tcttccgatg aggcatttgg cgtttcggca cttacttcta cggtatcaag atgagtaact
    56881 gtttcagcgt aagctgttga gataaaccct ataccagaac tgtataaggc aagttttatc
    56941 gctttagata gcgtgttcat aatttctcct aagtaatgaa taaaaaatta tttatgttgt
    57001 ttgagtaaca gtaagaaata gatacccccg agaatagagg caataatgcc tgccccaatc
    57061 tcataaggga aaattagata acgcccgagc caatcggcaa tgagcattag cattgcccct
    57121 aataatgccg atatagggat ctgtttctcc ggtgtaattg cacctaaatt tttagctaaa
    57181 tgaggggtca ttagcccaat gaagctcatt ggccctaccg caagtgtaga ggcggcactc
    57241 attagggcaa ttaaaagtaa tacaatcatt tgtacttttt taacctctaa ccctaaatgg
    57301 taagaaacgg tctcgccaag tgagatcaaa cgtaaaggtt tgataaacag taaagtggca
    57361 ctgataagta ggattgcaac agataataaa atccaaactg tattcggatt agcgtaatag
    57421 gttgagccag acagccaact aataactgcc gttaaacgag ggctgccgct tagttgaata
    57481 atagccatta agccactgac taaagctcca atagcaacac ctgtaatcat taacgctgat
    57541 ggttgtaatt tacgagagag ccacataata agagcgagaa cagtcaaact ccctaataca
    57601 ccaaataaca agaagctaat gctagataat gttgggaaaa gtaagaatga cagtactgca
    57661 gcaatagttg cccctgaact cacacctaat acttcagggc ttgccattgg gtttctcgtt
    57721 aagatttgta ataggctacc acttaccgca agcattgccc ctgttgctat cgcacttaga
    57781 ctacgaggca agcggtagga actcatcagg ttttcatcaa tgctaatagc ccagccattc
    57841 attgttggag caatgatttg taatagacaa aataggataa ctccagcgca taacaacaat
    57901 attggcagtt tccacgaatt gaggcgttta acggggaagt atgctgtatt gcttgcttca
    57961 aattgtgctt tacgttggcg taataccaag aaaattaata atggtgcgcc tagtgttgcg
    58021 gtaaatgcac caacaggtag tagagtgtcg taaattctgc taacaatgcc gatgagatta
    58081 ttggtaaaaa agagtaaaaa tccgcccgct agaaaagcaa tcaagaggcg aagtaataaa
    58141 tgtcgtattt tggcaaaatg agccaaactt gcactgcaaa tccaataaag ccaatcacac
    58201 ctattttgct tacaaccaat gctgtaatgg cggcacaaac aaaaataact aagtagcgta
    58261 gtaaattaac aggcgcgcct aagcggcgag cttgttcatc atctaaactt aaaattgtga
    58321 gtggacgaga gagtaagaca aagataaaaa atgcaactac taccgttatc gctaaggtaa
    58381 tagaagttgc ccaaccatct tgtaaaagtg agccacttcc ccaaaccatc acgccaaata
    58441 aaaaatcaaa gtagaaaagg gtcagtaaag aggcaatagc tccaaacaaa atattaacaa
    58501 tcaatccccc taaaataagg gtaaggggat tgagcttaga ggctttagca ataaataaaa
    58561 ccagtacgat agcagctaaa gagccaagta acgcaatcca gaaactagaa aaaagctcgg
    58621 cggctgggaa aaagataacc gcaatcatca atgcaagttg agccccgcta ctgacggcaa
    58681 gtgtgctatc tgacgctaaa ttatttctga caatatgttg taagccactg ctggctatag
    58741 ccaataaacc gcctgctaaa aatgacgttg tcatttcagg taaaagagct gcttttaccg
    58801 cagcttgatt aattggcaat aaatcaacat ttatgagtag taactgccat tcccactccc
    58861 agaccatatt taaacggata acagctgtta ctaaggataa aagaatacag ccaatcaata
    58921 agaatgatga tttcattact ctttttctcc ttgtgtcatt gcattgtgta aaaactcagc
    58981 aaagtgcgag atggaatcag ccccaccaaa gagccaaaca ggcggtaata ctttcataca
    59041 acggttttta ccaaatccta aacgttgcca aatgtagcta ttttctaaat ctgcttgcgt
    59101 cattttagaa aaaggtgaga tgacaattaa acaggtgcgt tcgggtaatt tagctaaatc
    59161 actcacagga ataagtttat ttccccagcg atctcccaca cctaaatcag cttgttttaa
    59221 gcccatcaaa tcaaaggcta cacggaacat tgaattagac gcatatatgc gtaactctct
    59281 cggagagcca aattgaacaa cagagtagta atcaatatct ggattactgt taaggatttc
    59341 tttcccccat tgagccaacg tttgttcagt tttcgttaaa tatgcttctg ccgcattagg
    59401 gtttttaatc tctgttccaa tcatacgagt ggctttttgg taagtatgcc aatgttgctg
    59461 aggttcagta ttgccaccat caaatagcac gtctatttgt ggaatttctt tcgggtaaac
    59521 agaagccaag tgagcgtaga aaaagtttga tagcaccaat tcaacaggaa gctgtgctaa
    59581 taattcgcga ttaggctgat aacgcgctcc aatatctaac acgctattag gctgaatagg
    59641 gcggtgcgac catagcggat aaattcgctt atcccccatc gcaatgggcg gatttcccat
    59701 ttcagtaagg gcagaggcaa tagaccaatc tggtgtaaaa atattaggtt gagcaaatgc
    59761 ggtagaaatt tgcaaaataa agagaaaaat gaaccgcttg tattgcctaa acatcataat
    59821 accgccactt tatgtaagcc tgcagggtgg ttaaacaagt gcagttttag cccgaagatc
    59881 tcaagtaatt tctgttcttg cataatttca tcaacagaac cttgaataca gagttcgcct
    59941 tgctttaacg caataatttc atcacaaaat tgggaggcaa gattaatatc gtgaataatg
    60001 ataatgacag ttagaccttg ttcattcact agcttgcgaa taagctgcat tacttcaact
    60061 tgataaacaa tatcaagggc agccaatggc tcatctagca gtaaataggg tgtttgttgg
    60121 gctaagcaca tagcaagcca aactcgttgt ttttctccgc ctgatagact atttacaggc
    60181 tgtttagcaa actgagtaac ggaggtgctt tccattgctt gctcaacaat ttgaacatca
    60241 aattctgttg gtttttgtag ccatttttga tatggaaatc gccctaaagc aaccagttcc
    60301 tgcactaaga aatccgccgc ttcaggtaaa cgttgtggta aataggcaat atgttttgcc
    60361 gcttctttgg tagaaagctg atgaagtggt aatccatcga ctaaaattga accgctggta
    60421 ggcgttatat ctccgcttag taaacgcatt aacgttgatt tacccgagcc gttatgcgcc
    60481 atataaacgc cccttgctta aattgaggga aatattgctt agcagtttac ggttttgttc
    60541 aacagagtag ctaatggaat ttatttgaat catagtgttg tgttttaaga gcataaaaaa
    60601 ggtgggatta ccccaccaaa tcaatcaaaa tgaaaatgag tagatgaaaa tctattatga
    60661 aaacggtgct aaatatattt ttattataaa tgaaagtcaa tatcatttag ttttaggtga
    60721 gggtaaattt taggataaat aaaaaataac cgac
//
LOCUS       DANLXD010000002        47473 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.002, whole genome shotgun sequence.
ACCESSION   DANLXD010000002 DANLXD010000000
VERSION     DANLXD010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 47473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 47473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..47473
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.002"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            15..1622
                     /gene="pckA"
                     /locus_tag="PXD18_000074"
     CDS             15..1622
                     /gene="pckA"
                     /locus_tag="PXD18_000074"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HDL6300551.1"
                     /translation="MLNRIEQELADLGITNVKEIVRNPSYEQLFEEEMKSDLKGYEKG
                     VLTNLGAVAVDTGIFTGRSPKDKYIVLDETTKDTVWWTSDAAKNDNKPMTQSTWQSLK
                     TLVTDELSNKRLFIIDAFCGASPEHRINVRIITQVAWQAHFVKNMFIRPTEEELKDFK
                     PDFVVMNGSQVTNPNWKEQGLNSENFVAFNITEGVQIIGGTWYGGEMKKGMFSMMNYF
                     LPLKGVASMHCSANVGEEGDVAVFFGLSGTGKTTLSTDPKRKLIGDDEHGWDENGVFN
                     YEGGCYAKTINLSIENEPDIYRAIRRDALLENVVVREDGTIDFDDKSKTENTRVSYPI
                     YHIDNIAVPSKAGHAKKVIFLTADAFGVLPPVSKLTPEQTKYYFLSGFTAKLAGTERG
                     ITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMEAAGAEAYLVNTGWNGTGKRISIKDT
                     RGIIDAILDGSIEKAEMSTLPIFNLAIPTALPGVETHILDPRNTYEDKAQWQAKAEDL
                     AGRFVKNFEKYATNEEGKALIAAGPKL"
     gene            1715..2716
                     /gene="bioB"
                     /locus_tag="PXD18_000075"
     CDS             1715..2716
                     /gene="bioB"
                     /locus_tag="PXD18_000075"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HDL6300552.1"
                     /translation="MTTFQLRLKAKDELTPHPTAQYWRKCQVEGLFDLPFMDLVFRAA
                     QVHRENFDANAIQLSTLLSIKTGGCPEDCEYCPQSARYDTGIEKQTMLDVETIVEKAK
                     IAKERGASRFCMGAAWRGPRPKDIKVVSEIINAVKSLGLETCGTFGMLEEGMAEELKQ
                     AGLDYYNHNLDTDPERYNKIIHTRNHEDRMDTLGKVRNAGLKVCCGGIVGMNETRPER
                     AGLIASLANLDPQPESVPINQLIKVEGTPLTNAEDLDWTEFVRTIAVARITMPQSFVR
                     LSAGRTTMPEAMQALCFMAGANSIFYGDKLLTTENPEEDHDRQLMDKLDLYPLQYIA"
     gene            2876..2973
                     /gene="ffs"
                     /locus_tag="PXD18_000076"
     ncRNA           2876..2973
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="PXD18_000076"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            3008..3715
                     /gene="gloB"
                     /locus_tag="PXD18_000077"
     CDS             3008..3715
                     /gene="gloB"
                     /locus_tag="PXD18_000077"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HDL6300553.1"
                     /translation="MLQITPIPALKDNYIWAIRNGQDVIIIDPSEHQPALNFIAKNAL
                     NLTAILITHNHHDHTDGVSGIVEQYPNIPVYGPQEVAEFANVIVSPEQHISLFGYDVR
                     IIESGGHTAGHISYLFGYDYLFCGDALFSGGCGRVFTGDYQAQFDALQRFKNLPNSVK
                     AYPAHEYTKSNLKFAEAVLPPSCVLSEYQEQVDLLRSQNKPTLPTTIGLEMQVNPFMQ
                     AVDLAEFIALRQQKDNF"
     gene            3874..4587
                     /gene="uppS"
                     /locus_tag="PXD18_000078"
     CDS             3874..4587
                     /gene="uppS"
                     /locus_tag="PXD18_000078"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005619022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HDL6300554.1"
                     /translation="MNFDPQNMPKHVAIIMDGNGRWAKQKGKLRIFGHQNGVKAVRSA
                     VSFAAKHHIQVLTLYAFSSENWSRPETEVSALMSLFMKALDSEVKQLHKNNIRLKIIG
                     DKSAFSENLQKRIAESEKLTENNTGLILNIAANYGGYWDIVQAAQQLAVHVKSEQLAV
                     EQITPALFQQHLVTENQPQVDLLIRTSGEQRISNFLLWQIAYAELFFSPVLWPDFNDE
                     AFSDAIYAYQQRERRFGGC"
     gene            4611..5480
                     /locus_tag="PXD18_000079"
     CDS             4611..5480
                     /locus_tag="PXD18_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDL6300555.1"
                     /translation="MLKERVLSAIIMIIAVLAAIFWLSPLPLTLVLSAIVVAAMWEWA
                     QFAGFKHPVPRAIVAMVTICLLLFAIVANTDYIRATRFITDETTPILFIGCIWWLIAL
                     VLVATYPNSAKLWEKSVAAKFLFGLATLVPFLIGTLALRFHNYAFDPYQGTYLFLYVC
                     LLVWGADSGAYFAGRAFGKRKLAPKVSPGKSWEGVIGGVLTSSLIAFTFLQLTPANVF
                     GKALATTPFILVSVGMVAISVLGDLAESMFKRQAGIKDSSQLIPGHGGILDRIDSLTA
                     AVPFFATFFFFVL"
     gene            5484..6794
                     /gene="rseP"
                     /locus_tag="PXD18_000080"
     CDS             5484..6794
                     /gene="rseP"
                     /locus_tag="PXD18_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HDL6300556.1"
                     /translation="MTSIIAFFILICVLVFVHEYGHFWAARKCGVKVIRFSIGFGKVL
                     FKKKDKQGTEFVFSLIPLGGYVQMWNDETDINAPAQQALNTKSVLQRAFIIIAGPAAN
                     FIFAILAYWVVFIAGIPTVKPVIGEILPNTIASQARIPTELEITKIGHQSIQDWESAS
                     LALVGFVGNKNVPLEGNINGNSTQKYELDLSNWSIDSAKENPLTALGIRPKSAKVTAE
                     IKQVVENSPASQVGIQAGDRILQINQQPFNWFNLVELVQAGKPIELKIEQRGQIKDLV
                     VQPEKKDERYIIGVIPSYEPLADKYRTELKYDILTAFYKSIEKVWSLTQTILQFIGNL
                     ISGDLSIKNLGGPISMAKGAGATAEIGLVYYLSFMALISVNLGVMNLFPLLPLDGGQL
                     VLLAVEAIRGKALSEKIQLKFQQIGFAFVLSLMLFAFANDIIHF"
     gene            6909..9290
                     /gene="bamA"
                     /locus_tag="PXD18_000081"
     CDS             6909..9290
                     /gene="bamA"
                     /locus_tag="PXD18_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HDL6300557.1"
                     /translation="MKKLLLSSLLIANGVVAAPFVVKDIRVEGVQPTTGESIISSIPV
                     RVGQTATDTDVSNVVRHLFSQQRFADVRATREGNTLVIKVAEKPIIGKVEIEGNQAIP
                     KDALEQNLKANLINQGEIFDAAKLEAFKEGLIEHYHSTGRYEAKIDTSVSNNTEGGVN
                     IKLAINEGEVAKAKTIKFEGNNAFSDKKLLENLDIQPDVSWWNIFESSKFEQTAYQKD
                     LETLRDFYLNRGYAKFAIQDTDVQFNDNKTEVALTYKLDEGSQYHVSEMRIIGNTANM
                     DSQLNALLKEFKPGQLFRKSDLTQIEEEIKSILGDAGYGSAKVDIYPQFNEENKTVKI
                     SFVVDAGRRIYVRKIRFEGNGVTADSTLRREMRQQEGAWLSTNKASLGKARLERTGFY
                     ESVDMSMPNVEGTADQVDVVYKIKERNTGSINFGIGYGTENGISYQAGIKQDNFLGMG
                     STISLNGTRNNYGTSVNLGYTEPYFTKDGVSLGGNIFYEDYDNSDNDSMASYKRQTYG
                     INGTLGFPVNENNSYYLGLGYTHDKIKNAAREYTREKYVKSMNFEFDPAADYYKKIKA
                     DDFDFSLGWNYNSLNRGYFPTEGTTANIGGKITIPGSDNKYYRVSADFRNYYPLNREH
                     KWVISTKASIAYTNGFGGKEVPFYQLYTAGGIGTLRGFSYGAVGPQAIYYNTKSGKFD
                     SMNNDIIGGNALAAASLELITPTPFVSEKYQHNVRTSLFVDAASAWNTKWKKDEYTNL
                     PDYGDFKRFRASAGIAFQWMSPIGPLSFSYAKPIRKYDNDDIEQFQFNIGSSF"
     gene            9370..10161
                     /locus_tag="PXD18_000082"
     CDS             9370..10161
                     /locus_tag="PXD18_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HDL6300558.1"
                     /translation="MKKLFKMTGLAVALASTTGIANAADTIGFVDPSYVLQNHPVLLD
                     ASAKFDKFMKESQEKFAADEKKLADENKTLTAERNKINEDAQKLQNEQKNVEASIKKK
                     VAALEKDAPRLRSKEIQARQNAIQKEANAFQAKVTAIQKREADFAKKAEAFQKRADEF
                     QKRIEQANKENGGINPQEAQKQAVDEVNATIKEIAKSKGYTLVLQPQVALYAEDEGKD
                     ITEAVLDAIVKKHPEIKIEKPATEAQPATEKETKAEETKPEEAKK"
     gene            10161..11186
                     /gene="lpxD"
                     /locus_tag="PXD18_000083"
     CDS             10161..11186
                     /gene="lpxD"
                     /locus_tag="PXD18_000083"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HDL6300559.1"
                     /translation="MANFRLIDLAEHIGGTLRGNADLAIQSIAALDKADSSQITFISN
                     AKYRENLTACNAGAIIVSPADVEFCRADQNLIIVANPYVAYAQLAQYMDSTPKAASEI
                     HPSAVISPEAKLGNNVSVGANAVIESGVELGDDAVIGAGCFVGKNSKIGARTQLWANV
                     SVYHNVQIGADCLIQSSTVIGSDGFGYANDKGQWIKIPQTGGVIIGNRVEIGACTCID
                     RGALDPTVIEDNVIIDNLCQIAHNVHIGFGTAVAGGVIMAGSLKVGRFCQIGGASVIN
                     GHMEICDGAIITGMGMVMRPITEKGIYSSGIPLQTNKEWRKTAALVMNIDEMNKRLKS
                     LEKRFND"
     gene            11215..11673
                     /gene="fabZ"
                     /locus_tag="PXD18_000084"
     CDS             11215..11673
                     /gene="fabZ"
                     /locus_tag="PXD18_000084"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HDL6300560.1"
                     /translation="MTTENREPNIIEVTEIMDMLPHRYPFLLVDRVTDYEEGKWLKAI
                     KNVTFNEPCFTGHFPGAPIFPGVLILEAMAQATGVLAVATYGKLSEDELYYFAAIDNA
                     RFKRPVVPGDQLQLEVEFLKEVRGITKFTGKAYVDGKLVCEADLMCARRK"
     gene            11707..12501
                     /gene="lpxA"
                     /locus_tag="PXD18_000085"
     CDS             11707..12501
                     /gene="lpxA"
                     /locus_tag="PXD18_000085"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HDL6300561.1"
                     /translation="MRLIDSTAKISPLAIIEEGAEIGAHVEIGPFSVIGKDVKIGART
                     KIHSNVVINGMTEIGEDNHIFQFASIGEINQDLKYQGEPTKVVIGNRNRIRESVTIHR
                     GTVQGGGVTKIGDDNLFMINTHIAHDCSIGNRCIIANNGTLAGHVTLDDFVIVGGMSA
                     IHQFVVIGSHVMLGGGSMVSQDVPPYVMAQGNHARPFGINFEGLKRRGFDKPTMHAIR
                     KVYKLIYSSGKTLEECLVEIEQIAATEPAIAIFKQFFKRSTRGIIR"
     gene            complement(12539..14539)
                     /gene="mnmC"
                     /locus_tag="PXD18_000086"
     CDS             complement(12539..14539)
                     /gene="mnmC"
                     /locus_tag="PXD18_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HDL6300562.1"
                     /translation="MGKLTFATLTFNDADTPVSEQFDDIYFSTQDGLAESYYVFQEGN
                     QLWEKWQSHPKEAFVIAETGFGTGLNFLAVADKFQQFRAAFPQSKLKRLYFISFEKFP
                     LTASQLADIHQRYPQFATLSENLTACWQPRQIGCQRYHFEQVYLDLWFGEIAENLPQL
                     GDLYSGTIDAWFLDGFSPDKNPEMWNEQLYLQMFRLSANGGSFATFTASSMVRRGLEA
                     AGFAVKKRKGFGKKREMLWGEKPLDSQVSEPNYPYFYAKNETADDIAIIGGGVASFFV
                     ALSLLEKGKQVTLYCKDETLAINASGNLQGAIYPQLSDDDERNVQFYIHSFDYALQRL
                     QQLKSNIEFEHNLSGVVLYAYDEKTAKKLEKMVEQTADDTLLKSCSQAELSEKLGLSV
                     PNSGAFIPQAGWLSPVQLVRNGFTWLEQKGLKIVLNHKVEHLTFSNGMWQWQTRGETV
                     RHQAVVLANGHTLNEFSQANGIPLYPVRGQVSQIPTTSELQKLKCVLCYDGYLTPMSA
                     YGTHCIGASHIRDNAETEFSLSEHWENVAKLQQNVTVCEWTQGIDLSENKAKVGIRAA
                     FRDRVPMVGAVHHFEQQKSQYANLYNQLRRKQAVENAEIFTNLYMVNGLSSRGLTTAP
                     LLGELLASLIVNEPVPISEDIWHNLSPNRAWIRKLLKGSTVA"
     gene            complement(14764..16200)
                     /gene="trpCF"
                     /locus_tag="PXD18_000087"
     CDS             complement(14764..16200)
                     /gene="trpCF"
                     /locus_tag="PXD18_000087"
                     /EC_number="4.1.1.48"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional indole-3-glycerol-phosphate
                     synthase TrpC/phosphoribosylanthranilate isomerase TrpF"
                     /protein_id="HDL6300563.1"
                     /translation="MQNIVQDNAQPNQPTILQKIVQDKAIWVAQKEQAFPLSEFQHKI
                     VKSDHDFYAALAKGTHQEPAYILECKKASPSKGLIRAEFDLDSIAQVYKNYAAAISVL
                     TDEQYFQGDFRYIDQVKRQTTQPILCKDFMISAYQVYLARFYNADAILLMLSVVNDET
                     YRELATLAHELGMGVLTETSTEAEFERALALGAKVIGVNNRDLHTLTIDMNRIVRLVE
                     KYQAQISADVCLISESGINDHQQVKNIKPYVHAFLIGSSLMGSADLNNAVRAVIFGEN
                     KVCGLTRVQDVKAVYEQGALYGGLIFAEGSPRQLSLRQAQELVVNAPLRYVGVFQNQA
                     VEFVEKMAKQLELFAVQLHGSEDEQYIAELAEKLGSKTQIWKALSVDVEVENLEFNDN
                     PQIARYVLDSKVGNQQGGTGKTFNWALIPETLKQKALLAGGIGTENIEQALAQGCVGL
                     DLNSGVESAKGVKDLQKLTACFGKIIQA"
     gene            16288..16599
                     /locus_tag="PXD18_000088"
     CDS             16288..16599
                     /locus_tag="PXD18_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqcC family protein"
                     /protein_id="HDL6300564.1"
                     /translation="MKSQVIQHLSYLEIALRVNQLWEATPPSPEALANEQPFCVETLT
                     PTQWLQWIFIPRMRAILDANADLPRNFAITPYLEEALKNEGYLQAICEPLLGLEKLLK
                     D"
     gene            16753..17481
                     /gene="truC"
                     /locus_tag="PXD18_000089"
     CDS             16753..17481
                     /gene="truC"
                     /locus_tag="PXD18_000089"
                     /EC_number="5.4.99.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(65) synthase TruC"
                     /protein_id="HDL6300565.1"
                     /translation="MTLDILYQDNSLIAINKPAGVLVHRSWLDKHETVFAMQTLRDQI
                     GQHVFPIHRLDRPTSGVLLFALNSETARIMSEQFEQHLVQKTYLAVVRGYLQGSAQID
                     YPLKVILDKIADKFSQEKEAQAAITDYKGLATVEMPYPVGKHQTSRYSLVELSPKTGR
                     KHQLRRHLKHLFHPIMGDSKYGDLHQNRALVEKSGVSRLMLHAHKLQFQHPKNLQKIE
                     IIASLDEQWQRLFAFFDWNFTQYY"
     gene            17499..17663
                     /locus_tag="PXD18_000090"
     CDS             17499..17663
                     /locus_tag="PXD18_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaH family protein"
                     /protein_id="HDL6300566.1"
                     /translation="MDNSLLSLTHEQQQAAVEEIQKLMAQGISAGEAIQIIANQLRDK
                     YQILEKSNNE"
     gene            17656..18132
                     /locus_tag="PXD18_000091"
     CDS             17656..18132
                     /locus_tag="PXD18_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300567.1"
                     /translation="MNKLWTVLALTITSHYSFAAAEKIVTKDLPAEGKPAVVLQVFDE
                     SEKIAKPIKGNKLFISKKQTRLCWHSINLPVQNKVTIAEAFYAPAAMKLASPGSKINS
                     SADKKNHTIITEINLANNQVLNRCWGFDKTDPVGKYKMEIQINDHIFKGLEFEIVK"
     gene            complement(18169..19020)
                     /locus_tag="PXD18_000092"
     CDS             complement(18169..19020)
                     /locus_tag="PXD18_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HDL6300568.1"
                     /translation="MENQKQAEIELKIMLEQQNVALVENYLNQTSPFPVLAHQTELLG
                     NTYYDTPEQFFATQKMGLRVRSVNQQYEITLKTQGEIVGGLHIRPEYNLALPNSQPDF
                     QTLVEKYQLPFENSEQIAESLQAIFSTDFTRKTWLVQVGMSDIEVALDQGIIKNHFGE
                     EPICELEFEIKQGNLGDLFTLVEAMPKADGMWLSNLSKAQRGYLLGQAVKWEQKIATA
                     MDGENSEKLTQLLADFICVGNESLEVLVRFNQCTQQQFSNWQQARAFVKSKDYLLHNL
                     TNLKTMI"
     gene            19081..20490
                     /locus_tag="PXD18_000093"
     CDS             19081..20490
                     /locus_tag="PXD18_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HDL6300569.1"
                     /translation="MFSKIHHKLNNFVQRGLDNHLRLAVTGLSRSGKTAFITSLVDQL
                     LHINKGGNSHLNLFAPARHGQILSVKRVEQGDLTIPRFEYDKNRQSLENQPPQWPEST
                     TGISEIRLAIRYQRQHSLLRHIKETGTLYLDIFDYPGEWLLDLPLLSLSYKEWSQTQQ
                     TIHKDERAELATPWLQAVKKLDLFAKTDENLLAEFSQQYTDYLLACKAQGMQYIQPGR
                     FVLPTENAKGAPVFQFFPLLDLSEAEWEKLEQSDRNSIFHTLKKRYEHYQKKIVKPFY
                     EDYFSQFDRQVILADCLTPLNYGYNEFMEMKLGLQQLFKHFHYGNRSLFHRLFSSNID
                     KLLFIATKADHITSDQVPNLESLMRQLVQEGGRHAEFDGIETGYLAISSIQATDAVKV
                     TQQDKIIKAIRGIRSSDRKQVTLYPGSVPNRIPDKNYWQFNRFEFDQFEPKQLDYSQA
                     IPHFRMDSVLQFLLADMFE"
     gene            20536..20886
                     /locus_tag="PXD18_000094"
     CDS             20536..20886
                     /locus_tag="PXD18_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6300570.1"
                     /translation="MNTVISQRKPIHWVGSTLDDIREFPDNIKRELGFDLDLVQQGLL
                     PRDFKAMANLGSGVMEIRVKDPSGAFRLVYLAKFKDAIYCLHAFQKKTQKTAPKDIAV
                     IKARYAAVKELENE"
     gene            20879..21202
                     /locus_tag="PXD18_000095"
     CDS             20879..21202
                     /locus_tag="PXD18_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HDL6300571.1"
                     /translation="MNNIDTKIRHTTEAQGNVFEDLGFPIDEAQKLKSASQQLIETKL
                     MLMNEMSNWIDKNNLKQSEAASILGVSRPRISDMVNGKLEKFTLDTLVTFVAKTGKTI
                     QLQLS"
     gene            21310..21789
                     /gene="smpB"
                     /locus_tag="PXD18_000096"
     CDS             21310..21789
                     /gene="smpB"
                     /locus_tag="PXD18_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HDL6300572.1"
                     /translation="MAKKPKVASNTIALNKRARHEYFIEDEIEAGLELQGWEVKALRA
                     GKGNISDSYVIFRHGEAFLFGAMITPLNMASTHIVSDPTRTRKLLLNKRELDSLFGKV
                     NREGYTIVATSMYWKNAWVKVKIGLAKGKKLHDKREDIKDREWQVAKQRIMKNANRG"
     gene            21992..23299
                     /gene="serS"
                     /locus_tag="PXD18_000097"
     CDS             21992..23299
                     /gene="serS"
                     /locus_tag="PXD18_000097"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HDL6300573.1"
                     /translation="MIDQNLLRTNLEDVATALKIKRNFILDVERVKTLEEQRKTLQVK
                     TETLQAERNTRSKNIGAAKARGEDISALLAEVDSMGNELDTAKVELDKVQAEIRELLL
                     SVPNLPADEVPLGKDDSENLEVLRWGEPRQFDFEVQDHVTLGENLNGLDFAAGVKLTA
                     SRFVVMKGKLARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLYGTGQLPKFGEDL
                     FHTQPLTGQDPNEVQRPFGLIPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRAEAG
                     SYGRDTRGLIRMHQFEKVEMVQIVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCT
                     GDMGFGAAKTYDLEVWLPAQNTYREISSCSNMWDFQARRMSARCKAKGDKKTRLVHTL
                     NGSGLAVGRTLVAVLENYQNADGSITVPEVLRPYMGGLEVITA"
     gene            complement(23358..23684)
                     /locus_tag="PXD18_000098"
     CDS             complement(23358..23684)
                     /locus_tag="PXD18_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300574.1"
                     /translation="MVSVDFKNNLLEFIFYGLFSEHTQTNIINGLQFYPKAGVAFRKD
                     LRFRKRAVYQREIMVFYQLDKIDEPKKVTIIAFRLGRMKNPIRLDTVQNRRVVTEIFM
                     NYPEKD"
     gene            complement(23677..23889)
                     /locus_tag="PXD18_000099"
     CDS             complement(23677..23889)
                     /locus_tag="PXD18_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300575.1"
                     /translation="MSIVIVDTDFVVHKEDEEWTTEEIKMIEEHLLEEQSAQYQVKRE
                     VPKQFYADIAERLSRGDLTAWEQLDG"
     gene            24076..26661
                     /gene="leuS"
                     /locus_tag="PXD18_000100"
     CDS             24076..26661
                     /gene="leuS"
                     /locus_tag="PXD18_000100"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HDL6300576.1"
                     /translation="MQQQYNPSEIEPKVQRYWAENKVFKAVKDVTKEKYYCLSMLPYP
                     SGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAVKNNTAPAKWTY
                     ENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYKKTSTVNWCP
                     NDETVLANEQVHEGCCWRCDTPVEQREIPQWFIKITDYAEELLNQLDNLPQWPDQVKT
                     MQRNWIGRSEGVEITFKIAGSNVELPVYTTRPDTFFGVSYVAIAAAHPLAELAAQNNP
                     ALAEFIREAKNTKVAEAELATMEKKGMATGLFAIHPLTGKEVPVWVANFVLMHYGTGA
                     VMAVPAHDERDFEFAQKYDLQINQVIQPLDGSEWDFSKAAYTEHGKLINSAEFDGLEF
                     DVAFTAIADKLEAMGVGKRQVNFRLRDWGVSRQRYWGAPIPMMTTEEGEVVTVPLQDL
                     PVILPEDVVMNGVQSPIKADPEWAKTTYNGKPALRETDTFDTFMESSWYYARYTCPQY
                     HEGMLDSDEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGILNSDEPATKLLCQ
                     GMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPQGRELVHSGMTKMSKSK
                     NNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGAKRFLGRVWNLVYSYAQ
                     NPATTALDVNALDKDQKELRRDVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKLTKAP
                     LETEQDKAVMAEALSAVVRMLYPITPHICFELWQVLGNEQTIDFAPWVQADESAMVED
                     EKLVVVQVNGKVRGKITVSATATEDEVKAIAKADPNVAKFLDGQQIVKEIYVPFKMLS
                     FAVKA"
     gene            26861..27349
                     /locus_tag="PXD18_000101"
     CDS             26861..27349
                     /locus_tag="PXD18_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300577.1"
                     /translation="MIKKLSLIAVFALTACGWHFKNNEVLPESFRTLTFESADQHSEM
                     SRILRNQLQLSDVKLVPSTANVAKLRLVSTSTDSKVVSVFKQAREAEKILTLNVDAIA
                     DIPNKGQYPLEVSVHRTFFDDSRAALAKSAEKEMIMKDMYEQASRQLIIKMAGLKKEL
                     SK"
     gene            27392..28417
                     /gene="holA"
                     /locus_tag="PXD18_000102"
     CDS             27392..28417
                     /gene="holA"
                     /locus_tag="PXD18_000102"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDL6300578.1"
                     /translation="MQKIFPETLQFSLNKGLQPFYLLTGNDLLLVNETKDAIIHTARL
                     NGFDEKKEVEIKNDTNWEELFEAAQSMGLFFARQIMVLNFPDSPTATQFKKLAELCAF
                     IHSDLLFILHLPKFSKTMEKQAWFTQIELNLVQINCQTPELSKLPQWVSHRAKAMNLQ
                     IENEANQLLCYSYEGNLLALKQALQLLQLNATDGKITLTKAQEVVEHSAQFTPFQWID
                     ALFEGKIQRAQRILYHLQNEEVQAVVLLRIVQKELMILLEITRNPTAVVSSEQSLFIG
                     NLRTEFDRLKIWQNRRPFYNQITQRLTYQKLYALIQQLAELERKVKQEFSDDIWQELE
                     RFSAQFT"
     gene            complement(28418..28603)
                     /gene="yacG"
                     /locus_tag="PXD18_000103"
     CDS             complement(28418..28603)
                     /gene="yacG"
                     /locus_tag="PXD18_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HDL6300579.1"
                     /translation="MPETIVNCPTCEKEVVWSKESKYRPFCSERCQIIDLGDWAAEKH
                     SIASEEAELFSEDLEKY"
     gene            complement(28585..29220)
                     /gene="coaE"
                     /locus_tag="PXD18_000104"
     CDS             complement(28585..29220)
                     /gene="coaE"
                     /locus_tag="PXD18_000104"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDL6300580.1"
                     /translation="MTYVVGLTGGIGSGKTTVSDLFSALGVEVIDADVVARQVVEPGT
                     PLLAKIVEHFGEEILTAEKALERTKLRQIVFNNEEEKTWLNNLLHPAIREEMVKKLQE
                     STACYVIWVVPLLIENKLTEYCDRILVVDVSPEIQLERATKRDNSKIETIKNIMAAQV
                     SREERLSYADDVIENNLPFEQGLLLIKEQVQALHYKYLALAKKEKECQKLL"
     gene            complement(29256..29912)
                     /locus_tag="PXD18_000105"
     CDS             complement(29256..29912)
                     /locus_tag="PXD18_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDL6300581.1"
                     /translation="MLILFSLFIAVWLKAEIPRFAIRVNRQIYQETTSLVNIGLTEQQ
                     FLAQSVLQPKQPRSANLFFLLFPLIMLCSESPIIGTIFILLCFLSLLDMCYYLTDIRY
                     LVLIFLLVLWESLADFQHQTFTFTLAFCLLIGLVSQLMFKKEAFGSGDMLLLVALSPL
                     FRLEKMLLLILTASLLGIGYYLAYWLMKKQKLAKLAFIPFISTAMLLVLMLESRGINY
                     "
     gene            complement(29915..31111)
                     /locus_tag="PXD18_000106"
     CDS             complement(29915..31111)
                     /locus_tag="PXD18_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDL6300582.1"
                     /translation="MTKIYEFHWQAQSRFGQKQRGKRLATNRDMLENLLLAQGYQHIR
                     ISRNFVLSANPKKEEVNSLLSQLALLVNSAMPLKQALSMLLQNCRNIRLYLWLNELIQ
                     HIESGYAFSQSLEKLGEFVTNQEIQLIKMGEQSGKLGIMLTNLAESRAKLEKLAKKVK
                     KILFYPVIVLLISLALSIGLLVLIVPQFAQLYGSKDKTLPLITDILFTLSECLIEQGT
                     VLLGTLLLAVIFYLFFAKKSRLVAKWKMALWAKMPLFSRIIEQSRIIFFSQNIALMLN
                     AHIPLDVALRSFLSEKNDDPILQQEIGTMLNLLQQGYKFSQGINPNVFGAEMAQMLEV
                     GEKSGNVAKMCEHISEMYQQKLDYQIDILSQLLEPMLMLIMGVIVGTIIVGLYLPIFD
                     MGALVE"
     gene            complement(31108..31560)
                     /locus_tag="PXD18_000107"
     CDS             complement(31108..31560)
                     /locus_tag="PXD18_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilB"
                     /protein_id="HDL6300583.1"
                     /translation="MEYSVTDLNSQRFIEISAEQWQKNCNEKQILLRYLAIPLQETEE
                     QLWLGIDDMQNLNACEIFAFIYHKQIEPVLISSDELKFLLNALSPEQSSRQSEIYEEN
                     TAYSLAHSEQVDRNDPIIQILENLFKFCLQHNASDIHFEPQKEKLLRQ"
     gene            complement(31581..32060)
                     /gene="ppdD"
                     /locus_tag="PXD18_000108"
     CDS             complement(31581..32060)
                     /gene="ppdD"
                     /locus_tag="PXD18_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent pilin"
                     /protein_id="HDL6300584.1"
                     /translation="MQKIVHFRPLGIRQLHRAFTLIELMIVIAIIAILATIAIPSYNS
                     YTQKAALSELLQASASYKSDVEVCIYNSGGLDNCSGGTNGIQANKTSSNTTKYLNSIA
                     VTKGVITVTGKGSLNGYGYTLTPSFSNNTISWTASCSGNDTSLFPANFCSTTVTPNG"
     gene            32241..33620
                     /gene="radA"
                     /locus_tag="PXD18_000109"
     CDS             32241..33620
                     /gene="radA"
                     /locus_tag="PXD18_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HDL6300585.1"
                     /translation="MAKAPKTAYVCNDCGAEYSRWMGQCKECKAWNTISEVRLISSKE
                     AAKSDRFSGYAGETSGKVQTLSDISLQEVPRFSSGFNELDRVLGGGVVPGSAILIGGH
                     PGAGKSTLLLQVMCGLAQHLPTLYVTGEESLQQVAMRANHLGLPTANLKMLSETSVEH
                     ICNIADQEKPKIMVIDSIQVMHLSDIQSSPGSVSQVRECASFLTRYAKTRQVAIIMVG
                     HVTKDGTLAGPKVLEHAIDASLLLEGESDSRFRTLRSQKNRFGAVNELGVFAMTEQGL
                     KEVKNPSAIFLSRSEEQTPGSSVMVLWEGTRPLLVEIQALVDHSMLANPRRVAVGLDH
                     NRLSLLLAVLHRHGGLQMSDQDVFVNVVGGVKVTETSADLALILALISSFRNRPLPQD
                     LVIFGEVGLAGEIRPVTSGQERISEAAKHGFKRAIIPHGNVPKKAIKDMQVFTVKKLS
                     DALDILYNL"
     gene            complement(33675..33905)
                     /locus_tag="PXD18_000110"
     CDS             complement(33675..33905)
                     /locus_tag="PXD18_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgjV family protein"
                     /protein_id="HDL6300586.1"
                     /translation="MDYVEILGYVAMILVACSFLLKDVIKLRVVNSLGCACFVVYGLL
                     IGSIPVTGLNALVVCINLYYISKGNRPTAAHS"
     gene            complement(34025..34519)
                     /gene="folA"
                     /locus_tag="PXD18_000111"
     CDS             complement(34025..34519)
                     /gene="folA"
                     /locus_tag="PXD18_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 dihydrofolate reductase"
                     /protein_id="HDL6300587.1"
                     /translation="MKISIIVARTINKVIGKDNQMPWHLPVDLAWFRQNTLGKPVIMG
                     RKTYESIGRLLPKRPNIILSRSGFTVEGAYAVQSLEQAVELAKNFANTAEIMIIGGGE
                     LFKQALPLAERLYLTEIQADIEGDTFFEFDEQNWALVEEKWSEIDENNPFRCRFMCLE
                     RKSV"
     gene            34595..34750
                     /locus_tag="PXD18_000112"
     CDS             34595..34750
                     /locus_tag="PXD18_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl kinase"
                     /protein_id="HDL6300588.1"
                     /translation="MATLFLVTSEQIMSKTIVIKFGTSTLTHGTKSLSRPYMLELVKL
                     NYTNSIV"
     gene            34747..35715
                     /gene="proB"
                     /locus_tag="PXD18_000113"
     CDS             34747..35715
                     /gene="proB"
                     /locus_tag="PXD18_000113"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDL6300589.1"
                     /translation="MIVVTSGAAAAGRDYLGHPELPKTLASKQMLAAVGQSQLIRVWE
                     NLFDIYNIHIGQMLLTRADLDDRERFLNARDTLDALLAQKIIPVINENDAVATEEFKV
                     GDNDNLSALVAILAQADQLYLLTDQEGLFSADPRSNPDAKLLSVVEKITPEIRQIAGG
                     SSTGLGTGGMSTKITAADIATRSGVETIIASGSRPNVLVDLANGQNIGSKFLVQSDRL
                     EGRKRWLFAAPQVGEIVVDFGAEQALLQHKSLLPVGVSAIKGEFTRGEVIKIFSQDGK
                     ALALGIARYSSEALLRIKGKKSKEIESLLGYEFGSVAVHSDEMVVY"
     gene            35715..36479
                     /locus_tag="PXD18_000114"
     CDS             35715..36479
                     /locus_tag="PXD18_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HDL6300590.1"
                     /translation="MELGIDVLAILFAVATLAGFIDAIAGGGGLLTIPALMAAGLPPA
                     MALGTNKLQACGGSLSSSLYFIRKKAVNLKQIWLLILCTFLGSAAGTIFVQMINVDFL
                     KTLLPFLILIIGIYFLVSPKIGDEDRKQRISFTLFAFTAAVALGFYDGMFGPATGSFM
                     TLAFILLLGFNLSKAVAHAKVINFTSNFASLIFFTLGGAVMWKIGLIMMVGQFIGGTL
                     GAKMVMTKGKKLIRPMLVTMSFMMVGKMLYEQGIFN"
     gene            36482..37114
                     /gene="nth"
                     /locus_tag="PXD18_000115"
     CDS             36482..37114
                     /gene="nth"
                     /locus_tag="PXD18_000115"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDL6300591.1"
                     /translation="MNKAKRIEILTRLRNENPKPTTELNYSNPFELLIAVILSAQATD
                     KGVNKATDKLFPVANTPQAILDLGVDGLKEYIKTIGLFNSKAENIIKTCRDLIEKHNG
                     EVPEDRDALEALAGVGRKTANVVMNTAFGHPTIAVDTHIFRVSNRTNFAPGKNVVQVE
                     EKLLKVVPDEFKVDVHHWLILHGRYTCIARKPRCGSCIIEDLCEFKEKTE"
     gene            37311..38561
                     /locus_tag="PXD18_000116"
     CDS             37311..38561
                     /locus_tag="PXD18_000116"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HDL6300592.1"
                     /translation="MDIYLVGGAVRDQLLGLPVKDRDFLVVGATAEQLLAQGFQQVGA
                     DFPVFLHPETKEEYALARQERKNGNGYNGFICDFSPNVTLEQDLIRRDLTINAIAQDE
                     NSTLFDPYGGVQDLENRLLRHVSPAFSEDPLRVLRVARFAARFHSFGFTIAPETLKLM
                     REMVQSGELKHLTAERVWLETQKAFETDNPHVYFDILRLIGALKVLFPELDRLFGVPQ
                     PPQHHPEIDSGKHTLMVLQQAKRLAKKAENPTALLFAALCHDLGKGLTPADILPHHYG
                     HEVKGIQPTRELANRLKIPTEIKDFALLVTEYHTHCHKMAELRPETVIKLFNSLDVWR
                     KPNRFFDFLFACEADARGRLGFEQRNYPQPELAKKYYQAAIEIDVQQVIQDGFEKQAI
                     REELNKRRVYAVRSIKLDSDLINH"
     gene            complement(38662..39597)
                     /locus_tag="PXD18_000117"
     CDS             complement(38662..39597)
                     /locus_tag="PXD18_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDT family transporter"
                     /protein_id="HDL6300593.1"
                     /translation="MSESKPFPITTGFFAMPLGLGALGLAWLNATPITPYATTIGNII
                     AGTSVILWVALLGCYVYRVFFCFEQIKAEFMHPVQCCLFSLVTMTTMISGDVLYVWDF
                     YLGELLIFLGVIVHLIFLVFIIGGLWKGTQFLPETLHPVHYLPPIAGSFTMASSLSLI
                     GYSEIASLFLGIGIISWLVYEPTMLQRIRLSPLFPIARPSLGIVLAPAFVGASAYFSM
                     GGELDLLAKMLWGYGFLQFCFILRNLKWIAENGFSMGFWAFSFGLAAMARGAIEFYQF
                     EPLSFIGLAGFTIANFGIGLLLIFTLKLWLQQSRA"
     gene            complement(39726..39920)
                     /gene="iscX"
                     /locus_tag="PXD18_000118"
     CDS             complement(39726..39920)
                     /gene="iscX"
                     /locus_tag="PXD18_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005656371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HDL6300594.1"
                     /translation="MKWTDTRMIAENLYDMNPDLDPTTVRFTDMHKWICEMEDFDDDP
                     EASNEHILEAILTIWLEEYE"
     gene            complement(39920..40261)
                     /gene="fdx"
                     /locus_tag="PXD18_000119"
     CDS             complement(39920..40261)
                     /gene="fdx"
                     /locus_tag="PXD18_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HDL6300595.1"
                     /translation="MPKIVFLPHEEFCPEGMVVEAKAGDNLLEVAHEAGVEIHHACDC
                     SCACTTCHVVIREGFDSLNDTSDQEEDMLDKAWGLEIDSRLSCQCIVGEEDLVVEIPK
                     YNLNHANEAAH"
     gene            complement(40280..40645)
                     /locus_tag="PXD18_000120"
     CDS             complement(40280..40645)
                     /locus_tag="PXD18_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 51 family protein"
                     /protein_id="HDL6300596.1"
                     /translation="MSNYVKTEISEQFRTVAVEFDLEDNRIFELGERINTEYDVAYMN
                     GYNWAAFLRAYLSIYRPSLLELLEEDPDVGCYYVTYPLSEKSKEKARELKKIIVYLVE
                     NEEEILNFIGEHLDNIEWD"
     gene            complement(40655..42508)
                     /gene="hscA"
                     /locus_tag="PXD18_000121"
     CDS             complement(40655..42508)
                     /gene="hscA"
                     /locus_tag="PXD18_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HDL6300597.1"
                     /translation="MALLQISEPGQTAAPHQHKLAVGIDLGTTNSLVATVRSGQTQVL
                     LDEQERALVPSVVHYAETEKTVGIEAFAKAALDPKNTVISAKRLIGRSLADVQQRYQN
                     LPYQFVASENGLPLIQTAQGNKSPIEVSADILSHLAQFAEKRLAGELSGVVITVPAYF
                     DDAQRQSTKDAARLAGLNVLRLLNEPTAAAIAYGLESGQEGVIAVYDLGGGTFDLSIL
                     RLRKGVFEVLATAGDTALGGDDFDHLLAEWIAEQANYKPQTASEQRELLTLATQTKVA
                     LSQAVEFEVKFANWTGVVSRSQFNELIQPLVKRSLMTCRRALKDAGVEAEEVREVVMV
                     GGSTRVPFVREQVGEFFGKTPLTSIDPDKVVAIGAAVQADILVGNKPDSDMLLLDVVP
                     LSLGIETMGGLVEKIIPRNTTIPVARAQEFTTGKDGQTAMTIHVLQGERELVEDCRSL
                     GKITLRGIPAMAAGVAQVRVTYQVDADGLLNVTAMEKSTKVQASIQIKPSYGLTDEEV
                     TQMIKSSMANAKEDMEARQLVEQRVEADRVIDSVVTALKEDGSAVLSVEEFQAIEAQL
                     ARLIELKEGTDRFAIQQGIKEVDLATQEFAARRMNLSIQKALAGKKMDDLA"
     gene            complement(42824..43165)
                     /locus_tag="PXD18_000122"
     CDS             complement(42824..43165)
                     /locus_tag="PXD18_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease domain-containing protein"
                     /protein_id="HDL6300598.1"
                     /translation="MKAILCQRAKQLRTNMTEAEKVLWQALRAKRFLAIKFKRQQVIG
                     NYIVDFVCFSAKLVIELDGSQHLDQQNYDNLRTHFLNGQGFRVLRFWNNQIHSDLEAV
                     LDTIFYEITRG"
     gene            complement(43313..43945)
                     /locus_tag="PXD18_000123"
     CDS             complement(43313..43945)
                     /locus_tag="PXD18_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2625 family protein"
                     /protein_id="HDL6300599.1"
                     /translation="MKNLEQLLDKQSAWLILRDWFTQAKNHYEILASYPEDAGSALVG
                     MQLSTRSPLGAMVYETGGVFIDHGWLRILGSGNEKLPRGLFDWNFGKTFKQSGEQPSH
                     LLVADDAIGGYFAINAGGIGSDLGKVYYYHPKAKKWENTQLGYSEFLGWALAGDLNHF
                     YQDLRWENWQTDVEKLQGHQVLDLTSKIAVPIERHYQGEFAPENMGYSVA"
     gene            complement(43999..44520)
                     /gene="hscB"
                     /locus_tag="PXD18_000124"
     CDS             complement(43999..44520)
                     /gene="hscB"
                     /locus_tag="PXD18_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HDL6300600.1"
                     /translation="MNNPFTLFDLPVQFQLDNAQLSERYLALQKQLHPDNFAHKSSAE
                     QLEAVQKSADVNEALNILKDPILRAEAMIEIHTGEAKNLEEKSMRDVDFLMQQLEWHE
                     KLETIEHRKDETELTVFLKQIKAEQKAVLEQLEQTLNTADWQKANALTDKLRYFKKLI
                     IQIEKVEEKFFDY"
     gene            complement(44530..44853)
                     /gene="iscA"
                     /locus_tag="PXD18_000125"
     CDS             complement(44530..44853)
                     /gene="iscA"
                     /locus_tag="PXD18_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HDL6300601.1"
                     /translation="MSITLTEAAANRVRTFLENRGKGIGLRLGVKTSGCSGLAYVLEF
                     VDVLNEDDQVFEQHGVKVIVDEKSLTYLNGTQLDFVKEGLNEGFKYTNPNVKNECGCG
                     ESFSV"
     gene            complement(44962..45345)
                     /gene="iscU"
                     /locus_tag="PXD18_000126"
     CDS             complement(44962..45345)
                     /gene="iscU"
                     /locus_tag="PXD18_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HDL6300602.1"
                     /translation="MAYSEKVIDHYENPRNVGTFDKEASDTGTGMVGAPACGDILRLQ
                     IKVNDQGIIEDARFKAYGCGSAIASSSLITEWVKGKSLEEAGAIKNSDIAEELELPPV
                     KVHCSILAEDAIKAAIADYKEKQAK"
     gene            complement(45472..46692)
                     /locus_tag="PXD18_000127"
     CDS             complement(45472..46692)
                     /locus_tag="PXD18_000127"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017459011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HDL6300603.1"
                     /translation="MKLPIYLDYAATTPMDERVAKKMMEYMTKDGIFGNPASRSHKFG
                     WEAEEAVDVARNQIADLIGADSREIVFTSGATESDNLAIKGAAHFYQTKGKHIITVKT
                     EHKAVLDTCRQLEREGFEVTYLDPEEDGILDLAKLKAAIRPDTILVSVMHVNNEMGVI
                     QPIKEIGAICRAKKIIFHVDATQSVGKIEVNVQDLNVDLMSFSSHKLYGPKGIGGLYV
                     CRKPRVRLEAIIHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMARLTVLRDR
                     LYNGFKDIEEVYVNGSMEEGKRIGSNLNISFNFVEGESLMMSLRDIAVSSGSACTSAS
                     LEPSYVLRAIGRDDELAHSSIRFTLGRWTTEEEIDHTIEIVKKAIVKLRELSPLWEMF
                     KEGVDLSKIEWNHH"
     gene            complement(46747..47199)
                     /gene="iscR"
                     /locus_tag="PXD18_000128"
     CDS             complement(46747..47199)
                     /gene="iscR"
                     /locus_tag="PXD18_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HDL6300604.1"
                     /translation="MKLTSKGRYAVTAILDIALHGKLEPVSLADISDRQAISLSYLEQ
                     LFAQLRRDGIVQSVRGPGGGYQLGKKPEEISVGMIISAVNENIDVTKCKGSGNCRKDS
                     QCLTHSLWERLEDQIEQFLGTISVADLAAEHADHDCEKEHCHDHPHHH"
BASE COUNT        14447 a         9990 c         9321 g        13715 t
ORIGIN      
        1 atgaggtaac cactatgtta aatcgtattg aacaagaact tgcagactta ggcattacaa
       61 atgtaaaaga aatcgtgcgt aaccctagct atgagcaact gtttgaagaa gagatgaaat
      121 cggatcttaa aggttatgaa aaaggcgtcc taacaaattt aggcgcagta gcggtagata
      181 ccggcatttt cacggggcgt tcgccgaaag ataaatatat cgtattagat gaaacgacaa
      241 aagataccgt ctggtggaca tctgatgcag ctaaaaatga taataaaccg atgactcaat
      301 ctacttggca aagtttaaaa accttagtga ccgatgagtt atctaataag cgtttattta
      361 ttattgatgc tttctgtggt gcaagccctg agcatcgcat caatgtgcgt attattaccc
      421 aagttgcgtg gcaagctcac tttgtgaaaa atatgtttat tcgtccaaca gaagaagaat
      481 taaaagattt caaaccggat tttgtggtaa tgaacggttc ccaagtaact aacccgaact
      541 ggaaagagca aggcttaaat tcagaaaact ttgtggcatt taatatcaca gaaggtgttc
      601 agatcattgg cggtacttgg tacggtggtg agatgaaaaa aggtatgttc tctatgatga
      661 actacttctt accattaaaa ggtgtcgctt caatgcactg ttcagccaat gtgggcgaag
      721 aaggtgatgt ggcggttttc tttggtttat caggaaccgg taaaacgaca ctatcaaccg
      781 atccgaaacg caaattgatt ggtgacgatg aacacggttg ggacgaaaac ggcgtattta
      841 actatgaagg tggttgctat gcgaaaacca tcaacctttc tattgaaaac gagccggata
      901 tttatcgtgc aatccgccgt gatgcgttat tagaaaacgt ggttgtgcgt gaagatggca
      961 ctattgattt tgatgataaa tcaaaaacag aaaatacccg tgtgagctat ccgatttatc
     1021 atattgataa tattgccgtg ccgtcaaaag caggacacgc taaaaaagtg attttcttaa
     1081 cggcagatgc attcggcgta ttgccaccgg tgtctaaatt aacgcctgaa caaactaaat
     1141 actacttctt atcaggcttt accgcaaaat tagcaggtac agagcgtggt attactgagc
     1201 caaccccaac tttctctgct tgtttcggtg cggcgttctt atcactccac ccgacacaat
     1261 atgctgaagt gttagtgaaa cgtatggaag cagccggtgc ggaagcctat ttagtgaata
     1321 ccggttggaa cggcacaggt aaacgtattt cgattaaaga tacacggggt attattgatg
     1381 ccatcttaga cggctcaatt gagaaagcgg aaatgagtac attaccaatc ttcaatttag
     1441 caattccaac tgcgttaccg ggtgtagaaa cccacatttt agaccctcgt aacacttatg
     1501 aagacaaagc acaatggcaa gctaaagcag aagatttagc tggcagattt gtgaaaaact
     1561 ttgaaaaata tgcgaccaac gaggaaggca aagcattaat tgctgctggt ccgaagttat
     1621 aagttgtaat tataagttat aatcgctaaa aaattagttt aggactaaac cttgaatgag
     1681 gtttagtcct tttgtataaa ggagaagtac aataatgaca acattccaat taaggctgaa
     1741 agccaaagat gagcttaccc cacacccaac agcacaatat tggcgaaaat gccaagtgga
     1801 aggactattt gatctgccgt ttatggattt agtgtttaga gcggcacaag ttcaccgtga
     1861 aaattttgat gctaatgcga tccagctttc aacgttactc tcaattaaaa caggaggctg
     1921 tccggaagat tgcgaatatt gcccccaatc tgcccgctat gatacgggaa tagaaaagca
     1981 aacaatgctt gatgtagaga cgattgtaga aaaagctaaa attgccaaag agcgtggagc
     2041 aagccgcttt tgtatggggg ctgcgtggcg aggacctagg cctaaagata ttaaagtagt
     2101 ctcagaaatc atcaatgcgg tgaaatcatt ggggctagaa acctgtggta ctttcggtat
     2161 gcttgaagag ggaatggcag aagaattaaa gcaagcaggg ctggattact acaaccataa
     2221 tttagatacc gaccctgaac gctataacaa aattatccat acccgaaatc acgaagatcg
     2281 aatggacact ttaggtaaag ttcgcaatgc cggcttgaaa gtttgctgtg gcggtattgt
     2341 gggaatgaac gaaacccgcc ccgagcgagc aggcctaatt gcaagcctcg ctaacctcga
     2401 tcctcaacct gaaagcgtac cgattaatca gttgattaaa gtagaaggta caccgcttac
     2461 caatgccgaa gatttagact ggacagaatt tgttcgtacc attgcggtag caagaattac
     2521 tatgcctcaa agctttgtcc gactttctgc tggcagaact actatgccgg aggcaatgca
     2581 agccctctgt tttatggcag gagcaaattc tattttctat ggcgataaat tacttactac
     2641 agaaaatccg gaagaagatc atgatcgcca attaatggat aaattagatt tatatccgct
     2701 acaatatata gcctgagtgc caatgatttt cgcctgaatg aaaattaaag aatcaatcgt
     2761 tattttacgc aaatttctaa cataaaataa ccgcttgcaa aattcgttct tgtcttattt
     2821 ttaaatttat ctataatgtg aggccttacg caagcttgcg taattcgatg gggcgttatt
     2881 ggttcctcgc aatggtgttc agcttacttg atcaggttcg gaagaaagca gtctgggttg
     2941 aaatttccgt gtgccgaggg aggctggtaa tgccccaccc ttttttcagt tctatcagga
     3001 gaacgttatg ctccagatca cccccattcc ggcattaaaa gataattaca tttgggcaat
     3061 ccgtaacggg caagatgtga ttattattga tccatcagaa catcagccag cattaaactt
     3121 tattgcaaaa aatgcgttaa atttaaccgc tatcttgatt acccataatc accacgacca
     3181 tactgatggg gtgagtggta ttgttgagca atatccgaat atccctgttt atggtccgca
     3241 agaagtggct gaatttgcca atgtgattgt ctcgcctgaa caacatatca gcctgtttgg
     3301 ttatgatgta aggattattg aaagtggtgg gcataccgca gggcatatca gttatttatt
     3361 tggctatgat tatctgtttt gtggcgatgc gttattctcc ggcggttgcg ggcgggtttt
     3421 caccggtgat taccaagccc aatttgatgc gttacaacgc tttaaaaatc tgcctaactc
     3481 ggttaaagcc tacccggctc acgaatacac caagagcaat ttgaaatttg cagaagcggt
     3541 tctaccacca agctgtgtat tatcggaata tcaagaacag gttgatcttt tacgttcgca
     3601 aaacaaaccg actttgccaa ccactattgg cttggaaatg caggtgaacc cgtttatgca
     3661 agcggtcgat ttagccgaat ttattgcact tcgtcagcaa aaagacaatt tttaacctca
     3721 tatttctaat taagcattaa agcctctcac tttaatgctt tttggttaaa taaaaccttt
     3781 gcaaacatcg cttgtcaatt ccactctggc ttatcctatg gtatagttac gactattttt
     3841 agcttaattt attattttag tgagtaaaat tctgtgaact tcgatcctca aaatatgcct
     3901 aagcacgttg ccattattat ggatggcaat ggcagatggg ctaagcagaa aggaaaatta
     3961 cgcatttttg gtcatcagaa tggtgtaaag gcagttcgtt ctgcagttag ttttgcagca
     4021 aagcatcata tccaagtttt aaccctctac gcatttagca gtgagaattg gagcagacca
     4081 gaaactgaag tttcagcttt aatgtctctg tttatgaaag ctttagattc tgaagttaaa
     4141 caattacata aaaataatat tcgcttaaag attataggcg ataaatccgc ctttagcgaa
     4201 aatttacaaa aacgcattgc cgaatcggaa aaattaaccg aaaacaatac tgggctaatc
     4261 ttaaacattg ctgccaacta tggtggttac tgggatattg ttcaagctgc tcaacaacta
     4321 gcagtgcacg ttaaatctga acaacttgct gtggagcaga ttacaccagc attgtttcaa
     4381 caacatttag tgacagaaaa ccagccgcaa gtggatttat taattcgaac cagtggtgag
     4441 cagcggatca gcaattttct attatggcaa attgcttatg ccgagctgtt ttttagcccg
     4501 gttttatggc ctgattttaa tgatgaggct tttagtgatg caatttatgc ttatcagcaa
     4561 cgtgaacgcc gattcggtgg ttgttaatat aaaaagaata aggaaataca atgcttaaag
     4621 aacgtgtact ttcagcgatt attatgatta ttgccgtgct ggctgccata ttttggctct
     4681 caccacttcc tttaacttta gtgttatcgg caattgttgt ggctgcaatg tgggaatggg
     4741 ctcaatttgc cggctttaaa caccctgtgc cacgtgcaat tgtggcaatg gtgacaatct
     4801 gcttattact ttttgcgatc gttgcgaata ctgattatat ccgagccacc cgttttatta
     4861 ctgatgagac tacccctatc ctctttattg gctgtatttg gtggttaatt gcccttgtcc
     4921 tagtggcaac ttaccccaac tcggcaaaac tgtgggaaaa atctgttgca gctaaattcc
     4981 tatttggact tgctacctta gtgccgtttt taattggcac gctcgcattg cgtttccata
     5041 attatgcatt tgatccatac caaggaactt atttattcct ttacgtctgt ttattagttt
     5101 ggggagctga ttcaggtgct tattttgctg gcagagcctt tggcaaaaga aaacttgccc
     5161 caaaagtatc tccgggtaaa tcgtgggaag gcgtaattgg tggcgtactc acctctagtt
     5221 tgattgcctt taccttttta caacttacac cggcaaatgt attcggcaaa gcattagcca
     5281 ctaccccatt tattttagtt tcggtcggta tggttgctat ttcagtctta ggcgatttgg
     5341 cagaaagtat gtttaaacgc caagcaggca ttaaagacag tagccagtta attcctgggc
     5401 atggaggtat tttagatcgt attgatagtt taaccgctgc cgttccgttt tttgctacat
     5461 tcttcttttt tgtactatag aatatgacgt ccatcattgc attttttatt ttaatttgcg
     5521 tactggtttt tgtgcatgaa tacgggcact tttgggctgc tcgcaaatgc ggggtaaagg
     5581 tgatccgttt ttcgatcgga tttggtaaag tcttatttaa gaaaaaagat aaacaaggaa
     5641 ccgaatttgt tttttcactt attcctctgg gcggctatgt acaaatgtgg aatgatgaaa
     5701 cggatatcaa cgctccagct caacaagctc ttaacacaaa atctgtattg caacgtgcat
     5761 ttattattat agccggtcct gctgcaaatt ttatttttgc gattttggca tactgggtcg
     5821 tttttattgc cggtattcca actgttaaac ctgttattgg ggaaatttta ccaaacacta
     5881 tcgcctccca agcaagaatt cctaccgaat tggaaattac aaaaatcggt catcaatcta
     5941 tccaagattg ggaaagtgca tctttagcac tagttggttt tgtgggcaat aaaaatgtac
     6001 cgttagaggg aaatatcaac ggcaactcaa cacaaaaata tgaactcgat ttatctaact
     6061 ggagtattga ctcagccaaa gaaaacccat taaccgcatt aggtattcgc cccaaaagtg
     6121 caaaagtcac cgctgaaatt aaacaagttg tcgaaaattc tcctgcaagc caagtgggta
     6181 ttcaagcagg tgatcgtatt cttcaaatta accagcagcc atttaattgg ttcaatttag
     6241 ttgaactggt acaagcaggt aaacctattg aacttaaaat tgaacaacga ggtcagatta
     6301 aagaccttgt cgtccaacca gaaaaaaaag acgaacgcta tattatcggg gtaataccaa
     6361 gttatgagcc tcttgcagat aaatatcgta ccgaattaaa atatgatatt cttaccgcat
     6421 tttataaaag tatcgaaaaa gtgtggtctc ttacccaaac catactccaa tttatcggta
     6481 atttaataag cggtgatttg tccattaaaa atttaggtgg gccaatttca atggcaaaag
     6541 gagccggtgc aacagctgaa atcggcttag tttattacct tagttttatg gctctaatca
     6601 gtgtcaattt gggggtaatg aacttatttc cacttttacc cttagatggt gggcaacttg
     6661 ttttattggc tgttgaagca attcgtggaa aagcattatc agaaaaaata caactcaaat
     6721 tccaacaaat tggatttgca ttcgtgctga gtttaatgtt attcgccttt gccaacgata
     6781 taattcactt ttaacaagcg gttaaaaaag gtgacttttt tgcaaaaagc accctgacat
     6841 caaaatccat aatatggatt taaactatat tcttaataat tttgcaaaac gatcatagga
     6901 taatttcaat gaaaaaatta ttactttcct ctcttttaat tgcaaacggt gtagttgctg
     6961 cacctttcgt agtaaaagac attcgtgttg aaggtgtgca acctacaaca ggcgaatcta
     7021 tcatttcatc tattccggtt agagtaggtc aaacagcaac ggatactgac gtatctaatg
     7081 tcgtccgcca tctattcagc caacaacgtt ttgcagatgt tcgtgcaaca cgagaaggca
     7141 atacgcttgt catcaaagtc gctgaaaaac cgattattgg caaggtagag atcgaaggta
     7201 accaagcgat tcctaaagat gccttagagc aaaatttaaa ggcaaactta attaaccaag
     7261 gtgaaatttt tgatgctgcc aagcttgaag cttttaaaga aggactaatc gaacattatc
     7321 actctaccgg ccgttatgaa gccaaaattg acacatctgt ttcgaataac accgaaggtg
     7381 gcgttaatat taagttagcg attaatgaag gtgaagttgc taaagccaaa acaattaagt
     7441 ttgaaggtaa taatgccttc tctgataaaa aattattaga aaacttagat attcaacctg
     7501 atgtttcttg gtggaatatt tttgaaagta gcaaattcga acaaaccgcc tatcaaaaag
     7561 acttagaaac attaagagat ttttatttaa atcgtggcta tgcaaaattt gctatccaag
     7621 ataccgatgt tcaattcaat gataataaaa cggaagttgc attgacctat aaattagatg
     7681 aagggtcaca gtaccatgtc agtgaaatgc gcattatcgg taatacagcc aatatggata
     7741 gccagctcaa cgccctacta aaagaattca agcctggtca attattccgt aaatcagacc
     7801 ttacacaaat tgaagaagag attaaatcta ttttagggga cgcaggttat ggttcagcta
     7861 aagtagatat ttatcctcaa tttaatgaag aaaataaaac cgtaaaaatc agttttgttg
     7921 tggatgccgg tcgtcgtatt tatgttcgta aaatccgttt tgaaggtaat ggtgtcactg
     7981 cagattcaac attacgtcgt gaaatgcgcc aacaagaagg tgcttggctt tccacaaaca
     8041 aagcttctct aggtaaagct cgtttagaaa gaaccggttt ctatgaaagt gttgatatgt
     8101 caatgccaaa tgtagaaggt acagccgatc aagttgatgt agtgtataaa attaaagaac
     8161 gcaataccgg tagtattaac tttggtatcg ggtacggcac ggaaaacggt atcagctatc
     8221 aagcaggaat taaacaagat aatttcttag gtatggggtc aactatcagt ctaaatggta
     8281 cccgtaataa ctacggtacc agcgttaacc taggctatac cgaaccttac tttactaaag
     8341 atggtgtaag tttaggcggt aatattttct atgaagatta tgataactca gacaatgatt
     8401 caatggcttc atataaacgc caaacctatg gtattaacgg cacattaggc ttcccggtaa
     8461 atgaaaataa ctcatactac ttaggtttag gctatacgca cgataaaatt aaaaatgcag
     8521 cacgtgagta cactcgtgag aaatatgtaa aatcaatgaa ctttgagttc gatccagctg
     8581 ccgattatta caaaaaaatc aaagctgatg attttgattt ttctctcggt tggaactaca
     8641 acagcttgaa tagaggctat ttcccgactg aaggaactac cgcaaacatt ggcggtaaaa
     8701 tcacaattcc aggctctgat aataaatatt accgagtcag tgcagacttt agaaattatt
     8761 acccgttaaa ccgtgagcac aaatgggtaa tttcaacgaa agctagcatt gcttatacta
     8821 atggatttgg tggtaaagaa gttccgttct atcagcttta tactgccgga ggtattggta
     8881 cactaagagg tttctcttac ggtgcagtag ggcctcaagc gatttactat aatacaaaat
     8941 ccggcaaatt tgatagcatg aataatgata ttatcggtgg taatgcgtta gctgcggcaa
     9001 gcttggaatt aatcacacca acgccatttg tgagcgaaaa atatcagcac aatgtaagaa
     9061 cctctctctt tgttgatgct gcaagtgcat ggaatacaaa atggaagaaa gatgaatata
     9121 cgaacttgcc tgactatggt gatttcaaac gtttccgtgc ttccgccggt attgcattcc
     9181 aatggatgtc tccaatcggg ccattatcat tctcttatgc gaaaccaatt cgtaaatatg
     9241 ataatgatga tattgaacaa ttccagttca acattggtag ttcattctaa ttaaccacaa
     9301 gcggttaata aatgtaaaaa atttgcaact tagccgctta tttcaaaact gttcatacaa
     9361 ggaaaacaaa tgaaaaaatt atttaaaatg actggcttag ccgtagcttt agcctctaca
     9421 accggaatcg cgaatgctgc agatactatt ggtttcgtag atccaagcta tgtattacaa
     9481 aaccaccctg tattattaga tgcttcggca aaatttgata aattcatgaa agaaagccaa
     9541 gaaaaatttg ctgctgatga aaaaaaatta gcagatgaaa ataaaacctt aacggctgag
     9601 cgcaataaaa ttaatgaaga tgcgcaaaaa ttacaaaatg aacaaaaaaa tgtagaagct
     9661 tctatcaaga aaaaagtggc agcattagag aaagatgcgc ctcgcttacg ttcaaaagag
     9721 attcaagcac gtcaaaatgc gattcaaaaa gaagcaaacg cattccaagc taaagtaaca
     9781 gcaattcaaa aacgtgaagc tgattttgca aaaaaagcag aagccttcca gaaacgtgca
     9841 gatgaattcc aaaaacgtat tgaacaagcg aataaagaaa atggtggcat taacccacaa
     9901 gaagcgcaaa aacaagcggt tgatgaagta aatgcaacca ttaaagagat cgcaaaatcg
     9961 aaaggttaca ctttagtatt acaaccacaa gtagcacttt atgctgaaga tgaaggtaaa
    10021 gatattactg aagcagtact tgatgctatt gttaaaaaac atccggaaat taaaatagaa
    10081 aaacctgcaa ctgaagctca accagctaca gaaaaagaaa ccaaagctga agaaactaaa
    10141 ccagaagaag cgaaaaaata atggcaaatt tccgtttaat tgatttagcg gagcatatcg
    10201 gcggtactct taggggtaac gccgatttgg ctattcaaag tattgctgct ttagataaag
    10261 ccgacagctc gcaaattacc tttatctcaa atgcaaaata tcgggaaaat ttgaccgctt
    10321 gcaatgctgg agctattatc gtcagcccgg cagatgtaga attttgccga gcagatcaaa
    10381 atcttatcat cgttgccaat ccgtatgttg cttatgctca actggctcaa tatatggatt
    10441 ctactccgaa agcagcgagc gaaatccacc caagtgcggt gatttcacct gaagctaaac
    10501 tgggtaataa cgtatcggta ggggcaaatg ccgtgattga aagtggcgta gaattgggcg
    10561 atgatgccgt gatcggtgca ggctgttttg tgggaaaaaa cagtaaaatc ggggcaagaa
    10621 cccaactttg ggcaaatgtt tcggtgtacc acaatgtaca aatcggagct gattgcttga
    10681 ttcaatcctc aacggttatc gggagtgatg ggtttggcta tgcgaatgac aaagggcaat
    10741 ggattaaaat cccacaaacc ggtggtgtga ttatcggtaa tcgtgttgaa attggtgctt
    10801 gcacttgtat tgaccgaggt gcattagatc caaccgtaat cgaagataat gtgattattg
    10861 ataacctttg ccaaatcgcc cataatgtac acattggttt tggcactgcc gttgccggcg
    10921 gcgtcattat ggcaggcagt ctaaaagttg gtcgcttttg ccaaattggt ggagcaagtg
    10981 ttatcaacgg tcatatggaa atctgtgatg gtgccataat taccggaatg ggtatggtta
    11041 tgcgcccaat tacagaaaaa ggaatttact catcaggtat tccattacaa accaataaag
    11101 aatggcgaaa aaccgcagca cttgtaatga atattgatga aatgaacaaa cgcttaaaat
    11161 cgttagaaaa acgttttaac gattaatttt attagaggtc ttaaagtgac agaaatgaca
    11221 actgaaaatc gtgagccaaa tattattgaa gtaaccgaaa ttatggatat gttaccgcat
    11281 cgctaccctt tcctgttagt tgatcgcgta accgattatg aagaagggaa atggttaaaa
    11341 gccattaaaa atgtaacctt caatgaacct tgttttaccg ggcattttcc tggcgcacca
    11401 atcttcccag gagtattgat tctggaagca atggctcaag caactggcgt attagccgtt
    11461 gccacttatg gtaagttaag tgaagacgaa ctctactatt ttgccgcaat tgacaatgct
    11521 cgctttaagc gaccggttgt gccgggcgat caacttcaac ttgaggttga atttcttaaa
    11581 gaagtacgtg gtattactaa atttaccggt aaagcatacg ttgatggcaa attagtctgt
    11641 gaagcagatt taatgtgcgc tcgccgtaaa taattcgata taagcccaaa ctagagggaa
    11701 caaactatgc gtctaattga ttcaacagca aaaattagcc cgcttgccat cattgaagaa
    11761 ggtgctgaaa ttggcgctca cgttgaaatt ggtccatttt cagtcatcgg taaagatgtc
    11821 aaaatcgggg ctagaacgaa aattcactca aatgttgtca ttaacggcat gactgaaatt
    11881 ggtgaagata accatatttt ccaatttgcc agcattggtg aaatcaacca agatctaaaa
    11941 taccaaggtg aaccaaccaa agtggtgatc ggtaatcgta accgtattcg tgaaagtgtt
    12001 actattcacc gaggtacggt acaaggcggt ggcgtgacga aaatcggtga tgataactta
    12061 tttatgatca acacccacat cgcacacgac tgctctatcg gtaaccgttg tattatcgcc
    12121 aataatggta cgctagcagg tcacgttacc ctagatgatt tcgtgattgt gggaggaatg
    12181 tccgccattc accaattcgt tgtgattggt tcacacgtta tgcttggagg cggttcaatg
    12241 gtcagccaag acgtaccgcc ttatgtcatg gcacaaggta accacgcacg cccatttggt
    12301 attaactttg aagggttaaa acgtcgtggc tttgataaac caactatgca cgctattcgc
    12361 aaagtctata aactgattta ctccagcgga aaaacattgg aagagtgcct agtagaaatt
    12421 gagcaaattg cagcaacaga acctgcgatt gctattttta aacaattctt caaacgttct
    12481 acccgtggta ttattcgtta ataaacgaaa ccccgaaatc aattcggggt ttgttttatc
    12541 aagcgaccgt cgaacctttc aacaattttc gaatccaagc tcgatttggg ctaaggttat
    12601 gccaaatatc ctcactgatt ggcacaggct cattcacaat caggcttgct aacaattccc
    12661 ctagaagtgg tgcagtcgtc aaacctcgag aagacaggcc gtttaccata tacagattgg
    12721 taaaaatttc agcattttct accgcttgtt tccgtctcaa ctggttgtat aaattggcat
    12781 attggctttt ttgctgctca aaatgatgca ctgccccaac catcggtaca cgatcacgaa
    12841 acgccgcacg aataccgact ttggctttat tttcagataa atcaattcct tgcgtccact
    12901 cacaaacggt tacattttgc tgaagttttg caacattctc ccaatgctcc gataaactaa
    12961 actcggtttc tgcattatcc cgaatatggc ttgctccaat gcaatgcgtg ccataggctg
    13021 acattggcgt taaataacca tcataacaaa gcacacactt cagtttttgt aattcgcttg
    13081 tagtcggaat ttggctcact tgccctcgta ccggatacaa cggaatgccg ttcgcttggc
    13141 taaattcatt caacgtatgt ccatttgcca gcacaaccgc ttgatgtcga accgtttctc
    13201 ccctcgtctg ccattgccac attccattag aaaaggttaa atgctcaact ttgtgattca
    13261 gtacaatctt caaccctttc tgctccagcc aagtaaagcc atttctaaca agttgtaccg
    13321 gtgaaagcca accagcttgc ggaataaatg ccccgctgtt tggcacgctt aaacctaatt
    13381 tttcacttaa ttctgcctgt gaacaagatt ttaataaggt gtcatcagcc gtctgctcca
    13441 ccattttttc cagtttttta gccgttttct cgtcataggc gtaaagcact accccgctta
    13501 aattatgctc aaactcaatg ttggatttca gttgttgcaa gcgttgcaat gcataatcaa
    13561 aactatggat ataaaactgt acatttcgct cgtcatcatc gcttaactgt gggtaaatcg
    13621 ccccttgtaa atttcctgaa gcatttattg ccaaggtttc atctttgcaa tacagcgtga
    13681 cttgcttgcc tttttctaac agcgataacg caacgaagaa actcgctact ccgccaccaa
    13741 taattgcaat gtcatcagcg gtttcatttt tggcataaaa ataggggtaa ttaggctcgg
    13801 aaacttggct atctaacggt ttctcgcccc aaagcatttc tcgttttttg ccaaatcctt
    13861 tgcgtttttt cactgcaaaa cctgcggctt ccagccctcg tctgaccata cttgaagcgg
    13921 taaaagtagc aaaactgccg ccattggcac ttagtcgaaa catttgcaga tataactgtt
    13981 cgttccacat ttctgggttt ttatcaggcg aaaagccatc taaaaaccaa gcgtcaatcg
    14041 tgccgctata aagatcgcct aattggggta agttttcagc aatctcaccg aaccataaat
    14101 ctaaataaac ctgctcaaaa tgataacgtt ggcaacctat ttggcgaggc tgccaacaag
    14161 cggttaaatt ttcagataat gttgcaaatt gcggatagcg ttggtgaata tcagctaatt
    14221 ggctggccgt cagaggaaat ttctcaaatg agataaaata gagtcgtttt agtttacttt
    14281 gcggaaatgc tgcccgaaac tgttggaatt tgtcagcaac ggctaaaaaa ttcaagcccg
    14341 tgccaaagcc ggtttccgca ataacaaaag cctctttcgg gtgagattgc cacttttccc
    14401 acagttggtt accttcttga aacacatagt aactttccgc caaaccatct tgggtagaaa
    14461 aataaatatc atcaaattgc tccgacaccg gtgtatctgc atcattaaat gtaagtgtcg
    14521 caaaagtcag tttacccatc atatcccctt aaaaacaaaa cacggaaaac cccaagattt
    14581 tccgtgtttc aaccagttca atagtaccaa tgttagaaaa tgttgctggc aaaaataacg
    14641 atcataccaa gtgcgcctac aaccgttagc attgaataac caaaagtacc cattttacaa
    14701 tcctcattgt taattatgat taaaacggct ttattctagc ataatttcca tcgctttgaa
    14761 tgcctatgct tgaataattt tgccaaaaca agcggtcaat ttttgtaaat cttttacgcc
    14821 tttggcactt tccacgccag aatttaaatc taacccgaca cagccttgag caagggcttg
    14881 ctcaatattc tcagtgccaa taccacctgc caataacgct ttttgtttta aggtttctgg
    14941 aatcaacgcc caattaaagg ttttgcctgt gccgccttgc tgattgccta ctttgctgtc
    15001 taatacataa cgagcaatct gtggattatc gttaaattct agattttcaa cctcaacatc
    15061 aaccgataag gctttccaga tttgagtttt actacctaat ttctctgcca gttctgcaat
    15121 gtattgctca tcttccgagc cgtgcaattg aactgcaaat aactcaagct gttttgccat
    15181 tttttccaca aattcgaccg cttgattttg gaacaccccc acataacgca acggtgcatt
    15241 caccaccaat tcttgggctt ggcgaagtga aagctggcga ggcgagcctt cggcaaaaat
    15301 taaaccgcca tataatgccc cttgctcata aaccgctttc acatcttgca cacgggttaa
    15361 gccacacact ttgttttcac caaaaatcac cgcccgcacc gcattattga gatcggcact
    15421 tcccattaaa ctgctgccga ttaaaaaagc atgaacatac ggcttaatgt ttttcacttg
    15481 ctggtgatcg ttaatacccg attctgaaat caaacagaca tcagccgaaa tttgggcttg
    15541 gtatttttcc accaaacgca caatgcggtt catatcaatc gtgagcgtgt gcaaatcacg
    15601 gttattaacg ccaattacct tcgcccctaa ggctaaggca cgttcaaatt ccgcctccgt
    15661 gctggtttca gtcaaaacgc ccattcctaa ctcgtgagcc agtgtggcaa gttcacggta
    15721 ggtttcatca tttaccaccg ataacatcaa taaaatcgca tcagcattat aaaaacgggc
    15781 aaggtaaacc tggtatgccg aaatcataaa atctttacac aaaatcggct gtgtggtttg
    15841 gcgtttgact tgatcgatat aacggaaatc gccttgaaaa tattgctcat cggttaaaac
    15901 cgaaatcgcc gcagcgtaat ttttatacac ttgggcaata ctgtctaaat cgaactcagc
    15961 acgaattaac ccttttgacg gtgaagcttt tttacattct aaaatataag ctggttcttg
    16021 gtgtgtgcct ttggcaagag ccgcatagaa atcatggtcg ctttttacaa ttttgtgctg
    16081 aaattcactt aacggaaagg cttgctcttt ttgtgccacc caaatggctt tatcttgtac
    16141 gatcttttgt aaaatcgtcg gttggtttgg ttgagcgtta tcttgaacga tgttttgcat
    16201 ataaattcct agagcgaaat cggtttgaat ggtaaaatct gcccttattt ttacccgaaa
    16261 aagtctcatt tcacaagcaa aactaagatg aaatcacaag ttatacagca tttatcttat
    16321 ttagaaatcg ccctgagagt taatcaactt tgggaggcga caccaccaag ccctgaagcc
    16381 ttagccaatg agcaaccttt ctgcgtggaa accttaaccc caacccaatg gctacaatgg
    16441 atttttattc ccagaatgcg ggccatttta gatgcaaatg ccgatttacc tcgcaatttt
    16501 gcaatcaccc cttatttaga agaggcattg aaaaacgaag gttatttaca agcgatttgt
    16561 gaaccgctat taggtttgga aaagttgttg aaagattaac ttctctctca gttcttttat
    16621 taatctgaca aattcgttga tagtgccagc gtccacgctg gtactaattt taacggttaa
    16681 ttaatcaaaa tttggcacaa gcgaggacgc ttgcgccatc atagagattt gataaattat
    16741 acttaatgta ttatgacctt agatatttta taccaagaca actcgcttat cgccatcaac
    16801 aaacctgccg gagtgttggt gcatcgttct tggttagata aacacgaaac ggtgtttgca
    16861 atgcaaaccc tgagggatca aatcgggcaa cacgtttttc cgattcaccg ccttgaccgc
    16921 ccaacctcag gtgtattgct gtttgctctc aacagcgaaa ccgcccgaat aatgagcgag
    16981 cagtttgaac aacacctagt acaaaaaact tatttggcgg tggtgcgtgg ctatttacaa
    17041 ggttcggcac aaattgatta tccgctcaaa gtgattttag ataaaattgc ggataaattt
    17101 tctcaggaaa aagaggctca agcggcgatt actgattata aaggcttagc aacggttgaa
    17161 atgccttacc ctgtcggcaa gcaccaaacc tctcgttata gtttggttga acttagccct
    17221 aaaaccgggc ggaaacatca gcttcgccgc cacctgaaac acctgttcca cccgattatg
    17281 ggagacagca aatatggcga cttacaccaa aaccgtgctt tagttgaaaa atcaggcgta
    17341 agtcgtttaa tgttacacgc ccataaattg caatttcagc acccgaaaaa tttgcaaaaa
    17401 atagagataa ttgcatcgct tgatgagcaa tggcaacgcc tctttgcatt ttttgactgg
    17461 aactttactc aatattatta gacaaaaaag aggattgaat ggataattca cttttatcat
    17521 tgacacacga gcaacaacaa gccgcagtag aagaaattca aaaactgatg gcacaaggca
    17581 tcagtgccgg agaggcaatt caaattattg ctaatcaatt acgtgacaaa tatcaaatat
    17641 tggagaaatc aaacaatgaa taaattatgg acagtgcttg ccctaacaat aacttcccac
    17701 tatagctttg ctgccgctga aaaaatagtc actaaagatt taccggcaga aggaaaacct
    17761 gcagtcgtgc tacaggtttt tgatgaaagt gaaaaaattg caaaacctat taagggaaat
    17821 aagctcttta ttagcaaaaa acaaacaagg ctttgctggc acagtattaa tcttcctgta
    17881 caaaataaag ttactattgc agaagctttc tatgcccctg ctgcaatgaa attagcttct
    17941 cccggctcta aaattaattc ttctgcagac aagaaaaatc atactatcat tactgaaata
    18001 aaccttgcaa ataatcaagt attaaatcgt tgctggggtt ttgataaaac tgaccctgtc
    18061 ggtaaataca aaatggaaat tcaaattaac gatcacattt tcaaaggttt agaatttgaa
    18121 attgtaaaat aacctaaaag ccacagagta acaccctgtg gctttttgct aaatcattgt
    18181 ttttaaattg gttaaattgt gcagcaaata atctttactc ttcacaaagg ctctcgcctg
    18241 ttgccagttg ctaaattgtt gctgagtgca ttgattaaaa cgtaccagca cttccaaact
    18301 ttcattgccg acacaaataa aatcagctaa taattgggtt aatttttcac tgttttcacc
    18361 atccattgca gttgcaattt tctgctccca tttaaccgct tgtccgagca aataaccccg
    18421 ctgggctttg cttaaattac tcaaccacat cccatccgct tttggcattg cctcaaccaa
    18481 agtaaataag tcgcctagat ttccttgctt gatttcaaac tccaattcac aaatcggctc
    18541 ttcaccaaaa tgatttttaa tgatgccctg atctaacgct acctcaatgt cagacatccc
    18601 cacttgcacc aaccaagttt tacgagtgaa atcggtgctg aatatcgctt gcaagctttc
    18661 tgcaatctgc tctgaatttt caaacggcaa ctggtatttt tccactaatg tttgaaaatc
    18721 cggctggcta ttgggtaaag ctaaattata ttccggacga atatgcaaac cgcctacaat
    18781 ttccccttgt gtttttaacg tgatttcata ttgttgattc acagaacgca cccgcagccc
    18841 cattttttgc gtggcaaaaa attgctcggg cgtatcataa taggtgttgc ctaacaattc
    18901 cgtttgatga gcaagcacag ggaatggcga ggtttgattc aagtagtttt ccactaacgc
    18961 cacattctgc tgttccaaca ttattttcag ttcgatttct gcttgttttt ggttttccat
    19021 ttcacacgcc cctgcaacgt tgtataatca agcggttatt ttatcaataa attttgcaaa
    19081 atgttttcaa aaattcacca taaactgaat aactttgtcc agcgtggact cgacaaccat
    19141 ttacgcctcg ccgttaccgg cttaagccgt agtggcaaaa cggcatttat taccagcttg
    19201 gttgatcagc ttttgcatat caacaaaggc ggtaattcgc atttaaacct gtttgcgcct
    19261 gcacgccacg ggcaaattct atcggtaaaa cgcgttgagc aaggggattt aactattccc
    19321 cgctttgaat atgataaaaa ccgccaaagc cttgaaaatc aaccacctca atggcctgaa
    19381 tccaccactg gcattagcga aattcgcctt gcgattcgct accagcggca acattctctg
    19441 ctacgtcata ttaaagaaac cggcacgctt tatttggata ttttcgatta cccgggcgaa
    19501 tggctgttag atttacccct gctctccctt tcctataaag aatggtcgca aacgcaacaa
    19561 accatacata aagatgagcg tgcagagctt gccacacctt ggttacaagc ggttaaaaaa
    19621 ctcgatcttt ttgcaaaaac cgatgaaaat ttactggcag aattcagcca acaatacacc
    19681 gattatttgc tcgcctgcaa agctcaagga atgcaatata ttcagccggg gcgatttgtg
    19741 ttgccaactg aaaatgccaa aggtgcaccg gtattccaat tttttccgtt attagattta
    19801 agcgaagctg agtgggaaaa gttggaacaa agcgacagaa acagtatttt ccataccctc
    19861 aaaaaacgct atgagcatta ccagaaaaaa atcgtcaaac cgttttatga agattacttc
    19921 tctcaatttg accgccaagt gattttggca gactgcctca caccgttaaa ttatggctat
    19981 aacgaattta tggaaatgaa attagggtta cagcaactgt ttaaacattt ccattatggc
    20041 aatcgttcgc tatttcaccg tctgttttcg tccaacattg ataaattgct atttatcgca
    20101 acaaaggcag atcacattac tagcgaccaa gtgccgaatt tggaaagcct aatgcgacaa
    20161 ttagtgcaag aagggggaag acacgcagaa tttgatggta tcgaaaccgg ctatttagcc
    20221 atttcctcga ttcaagcaac cgatgcggtg aaagtgactc agcaagataa aatcattaaa
    20281 gcgataagag ggatccgttc cagcgataga aaacaagtga cactctaccc tggcagcgtg
    20341 ccaaatcgca tacccgataa aaattactgg caatttaacc gttttgaatt cgaccaattc
    20401 gagcccaagc aacttgatta tagccaagcg attccacact tcagaatgga ttcggtgcta
    20461 caatttttat tggcggatat gtttgagtaa aatcttgttg catatttcca ttaaaggtat
    20521 aaaattttat acattatgaa tactgtaatt tcccaacgaa aaccaattca ctgggttgga
    20581 tcaaccttag atgatattcg tgaatttccg gataacatta aaagagaact cggttttgat
    20641 cttgatttag ttcagcaagg cttattaccg agggatttta aagcgatggc aaatttgggt
    20701 tcaggcgtaa tggaaattcg agtaaaagat ccctcagggg cttttcgctt agtgtattta
    20761 gctaaattta aagatgcaat ttactgttta cacgctttcc aaaagaaaac gcaaaaaaca
    20821 gcccctaaag acattgctgt cattaaagca cgctatgctg ccgtaaagga gttagaaaat
    20881 gaataatatt gatactaaaa ttcgccatac tacagaagct cagggtaatg tttttgaaga
    20941 tcttggtttc cctattgatg aagctcaaaa attgaaatct gccagtcagc aactgattga
    21001 aactaaactg atgctaatga atgaaatgag caactggatt gataaaaata atctcaaaca
    21061 atcagaagcg gcttctattc taggtgttag ccgccctcga atttctgata tggtcaatgg
    21121 caagttagaa aagtttaccc tagatacctt agtcactttt gttgcaaaaa ccggcaaaac
    21181 aatccaattg caattatcct gatatttgca aaattttact caaattcaac cgcttgttgc
    21241 ttttatcatt cactaacaag gttatttcaa gtaaaattgt gactaatttt ttattaataa
    21301 acacaaatta tggcaaaaaa acctaaagtt gcatcaaata cgattgcgtt aaataaacgt
    21361 gccagacacg aatatttcat tgaagatgaa attgaagccg gcttagagct acagggctgg
    21421 gaagtcaaag cattgcgtgc cggaaaaggc aatatcagcg atagctatgt catctttcgc
    21481 cacggcgaag ccttcttatt cggggcaatg attacgcctt tgaatatggc atcaacccat
    21541 attgtcagcg acccgacccg cacccgcaaa cttctactga ataaacgtga gttagactca
    21601 ctgttcggta aagttaatcg tgaaggttat accattgttg ccacctcaat gtattggaaa
    21661 aatgcgtggg tgaaagtaaa aatcggctta gccaaaggga aaaaactgca cgataaacgt
    21721 gaagatatta aagaccgtga atggcaagtg gctaaacagc gtattatgaa aaacgccaat
    21781 cgtggctaaa tgaataatta ccctctcccc ttgtgggaga gggacagaaa aattgcgttc
    21841 agcaattttt cagggaaagg gggatttgta aaagttcaag gaaaaacaac gcttgccctc
    21901 tctctgaaaa atatttctga acgaaatatt tttcggtctc tctcccataa agggagagag
    21961 tgaaacacaa atttaaacta aggaacatac aatgatcgac caaaacctac ttcgtaccaa
    22021 tttagaagac gttgctacag ctcttaaaat caaacgtaat tttattttag atgtagagcg
    22081 agtaaaaacc cttgaagaac agcgtaaaac gctacaagtt aaaaccgaaa ccttacaagc
    22141 agaacgcaac actcgctcca aaaacatcgg tgcggcaaaa gctcgtggcg aagatatttc
    22201 agctttatta gccgaagtag attcaatggg caacgaatta gacacggcaa aagtagaatt
    22261 ggataaagta caggcagaaa tccgtgagtt gttgctttct gtgccaaact taccggcaga
    22321 tgaagtacca ctcggtaaag acgatagcga aaacttagaa gtattacgtt ggggcgaacc
    22381 acgtcaattc gactttgaag ttcaagatca cgttaccctt ggcgaaaact taaacggttt
    22441 agattttgct gccggtgtaa aattaaccgc cagccgtttt gtggtaatga aaggtaaact
    22501 tgcccgctta caccgtgcat tatctcaatt tatgttggat ttacacactg aacaacacgg
    22561 ctatgtggaa accaatgtgc catttttagt caatcacgac actctatacg gcacaggtca
    22621 gctaccaaaa tttggcgaag atttattcca tactcaacca ttaacagggc aagatccaaa
    22681 cgaggtgcaa cgcccattcg gtttgattcc aaccgctgaa gtgccagtaa cgaacttagt
    22741 gcgagatgaa atcattgatg aagacagctt accactgcgt tataccgccc acaccccttg
    22801 tttccgtgca gaagccggtt cttatgggcg tgatactcgt ggtttaattc gtatgcacca
    22861 atttgaaaaa gtggaaatgg tgcaaattgt cgcccctgaa aaatcaatgg aagccttaga
    22921 agaattaacc ggtcacgcag aaaaagtctt acagctttta ggcttgccat accgcaaagt
    22981 gctactctgc actggtgata tgggctttgg tgcagcaaaa acctacgact tagaagtttg
    23041 gctaccggca caaaacactt accgtgagat ttcttcttgc tcaaatatgt gggatttcca
    23101 agcccgccga atgtctgcac gttgtaaagc taaaggcgac aagaaaactc gcttggttca
    23161 caccttaaac ggctcaggtt tagcggttgg tcgcacactg gtcgctgtgt tagaaaacta
    23221 ccaaaatgcc gatggctcta ttactgtgcc tgaggtgtta agaccttata tgggtggttt
    23281 ggaagtaatt accgcttaag attaataaat gaaaccaatc tcagaaatgg ggttggtttt
    23341 tttaataaat cttatcccta atctttttca ggataattca taaaaatttc agtaactact
    23401 cggcggtttt gcactgtatc taaacgaata ggatttttca ttctccctaa acgaaatgca
    23461 ataatggtga cttttttcgg ttcatctatt ttatctaatt gatagaatac cattatttcc
    23521 cgttgataaa ccgctcgctt tctgaaacgt aaatccttgc gaaatgcgac acctgctttt
    23581 ggataaaact gtaaaccatt gatgatattc gtttgagtat gctccgaaaa taatccatag
    23641 aaaataaact ctaatagatt atttttaaaa tcaacactaa ccatctaact gctcccaagc
    23701 agttaaatct cctcgtgata aacgttcagc aatatcagca taaaattgtt tcggtacttc
    23761 cctttttact tggtattgag ctgattgttc ttctaataaa tgttcttcta tcatcttgat
    23821 ttcttctgtt gtccactctt catcttcttt atgtacaaca aaatcggtat ctacaatcac
    23881 aatagacata cctagctcct tcaagtactg gttatatatt ctgtattttg cctgttctaa
    23941 attcagctgt ctagcttttc tgttactcac aatttgcaaa tttttcatca aattccaccg
    24001 cttgccattc aaaaaaaggc gtttttgcgg tatcctatcg gcaatttttt cagttaaatt
    24061 taaaggttaa attttatgca acagcagtat aacccaagtg agattgaacc taaggttcag
    24121 cgttattggg cagaaaataa agtttttaaa gcagttaaag acgttaccaa agagaaatac
    24181 tattgccttt caatgttgcc ttatccgtca ggtaagctac atatggggca cgttcgtaac
    24241 tacaccattg gtgatgtagt gtctcgttat cagcgtatga tcggtaaaaa tgtattacag
    24301 ccgatgggtt gggacgcttt cggtttaccg gcggaaggtg ctgcggtgaa aaataatacc
    24361 gcaccggcaa aatggactta cgaaaacatc gaatatatga aaggtcagct taaaatgttg
    24421 ggcttctctt atgactggga tcgtgaagtc accacttgcc gtccggaata ctacaaatgg
    24481 gagcaatggt tcttcacaga actttataaa aaaggcttag tgtataaaaa aacctcaacc
    24541 gtaaactggt gtccgaatga tgaaactgtg cttgccaacg agcaagttca cgaaggttgt
    24601 tgctggcgtt gtgacacccc agtggaacag cgtgaaattc cacaatggtt tatcaaaatc
    24661 actgactatg ctgaagaatt actcaatcag ttagataatc tcccacagtg gccggatcaa
    24721 gtaaaaacca tgcaacgcaa ctggatcggt cgttccgaag gggtagaaat cacctttaaa
    24781 attgccggtt caaacgtaga attaccggtt tacactaccc gtccggatac cttcttcggc
    24841 gtaagctatg tggcgattgc tgcggctcac ccattagcag aattagctgc acaaaataac
    24901 ccggcattgg ctgaatttat ccgtgaagcg aaaaacacca aagtggcaga agcagaatta
    24961 gccaccatgg agaaaaaagg aatggcaacc ggcttgttcg ccattcaccc gttaacagga
    25021 aaagaagtac cggtttgggt tgctaacttt gtgttaatgc actacggtac aggtgcggta
    25081 atggcggttc cggctcacga tgagcgtgac tttgaatttg cacaaaaata cgatttgcaa
    25141 attaatcagg taattcaacc gcttgatggc tcagagtggg atttcagcaa agccgcttac
    25201 accgaacacg gtaaattaat caactctgcc gagtttgacg gcttggaatt tgatgtggct
    25261 ttcactgcga ttgccgataa attagaggca atgggtgtag gtaaacgcca agtgaatttc
    25321 cgtctgcgtg actggggtgt ttctcgtcaa cgttattggg gtgcaccaat cccaatgatg
    25381 accacagaag agggcgaagt ggttaccgtt ccattacaag atttaccggt gattctccct
    25441 gaagatgtgg taatgaacgg cgtgcaaagc ccaatcaaag ccgacccaga gtgggcgaaa
    25501 accacttaca acggcaaacc ggcattgcgt gaaaccgata ccttcgatac ctttatggag
    25561 tcctcttggt attatgcacg ttatacttgc ccacaatatc acgaaggaat gttagattca
    25621 gacgaggcaa actactggct accggtcgat caatatatcg gcggtattga acacgccaca
    25681 atgcacttgc tctacttccg tttcttccat aaattgttgc gtgatgcggg tattttaaat
    25741 tcggacgaac cggcgactaa actgttatgc caaggtatgg tgcttgccga tgcgttctac
    25801 tacaccagcc caactaacga gcgtatttgg gtcagcccga cacaagtcac cttagaacgt
    25861 gatgagaaag gtcgtatcat caaagcaacc gatccacaag ggcgtgagct ggttcacagc
    25921 ggtatgacta aaatgtcgaa atcaaagaac aacggtatcg atccgcaaga aatggtggaa
    25981 aaatatggtg ctgacacagt tcgcttgttt atgatgtttg cctcccctgc ggaaatgaca
    26041 ttagaatggc aagaatccgg cgttgaaggg gcaaaacgtt tcttaggtcg tgtttggaat
    26101 ttagtttata gctatgccca aaatccggca acgactgcat tagatgtgaa tgccttagac
    26161 aaggatcaaa aagaacttcg ccgtgatgta cacaaaacga ttgctaaggt gagtgatgat
    26221 attggtcgtc gtcaaacctt caatacagcg attgctgcgg tgatggaatt gatgaacaag
    26281 ctcaccaaag ccccacttga aaccgaacaa gataaagccg taatggcaga agctttaagt
    26341 gcggtggtgc gtatgcttta cccaatcacg ccacatatct gctttgagtt atggcaagtg
    26401 ttaggtaatg aacaaaccat cgattttgcc ccttgggtac aagccgatga atccgcaatg
    26461 gtggaagatg aaaaattagt ggtagtacaa gtcaacggaa aagtgcgtgg caaaatcact
    26521 gtttcagcta ctgctacgga agatgaagtt aaagctatcg ctaaagccga tccaaacgtt
    26581 gctaaattct tagatggtca gcagattgta aaagaaatct acgttccatt taaaatgttg
    26641 agctttgcgg ttaaggcgta acaaacacac tctcccttat atgggagaga gaccgataaa
    26701 tatttcgtgc agaaatattt atcagagaga gggtacaagc ggttattttc ttggaaaatt
    26761 ttgcaaaaaa tagccccctc tccctgcttt ttcttctaaa cgaagaaaaa cctgtccctc
    26821 tcccacaagg ggagagggga ataaacaagg aaatctcatt atgattaaaa aactctctct
    26881 catcgctgtt tttgctctta ccgcctgcgg ttggcacttt aaaaacaatg aggtattacc
    26941 tgaatcgttc agaacattaa cctttgaaag tgcagatcaa cacagcgaaa tgtctcgaat
    27001 tttacgcaat cagttacaac taagcgatgt aaaattagtg cctagcacgg ctaatgtggc
    27061 aaaattacgt ttggtttcaa cctcaacaga cagcaaagtg gtttctgtgt ttaaacaagc
    27121 tcgtgaagca gaaaaaatct taacgctaaa cgttgatgcg attgccgata ttccaaataa
    27181 agggcaatac cctttagaag tttcggttca tcgtactttc tttgatgact ctcgtgcagc
    27241 tttggcaaag tctgctgaaa aagagatgat tatgaaagat atgtatgaac aagcctctcg
    27301 ccaattaatt atcaaaatgg cgggcttaaa aaaagaactc tcaaaataat cattgtaggg
    27361 gcgaaatatg tttcgcccat tgtttatctg tatgcaaaaa atctttccgg aaacacttca
    27421 attttcatta aacaaaggac tacagccctt ttatctatta acagggaatg atctgctatt
    27481 ggtgaatgaa accaaagatg ccattattca caccgcccgt ctcaacggtt ttgatgaaaa
    27541 aaaagaagtt gaaatcaaaa acgatactaa ctgggaagaa cttttcgaag cagctcaatc
    27601 aatgggattg ttttttgcac gccaaattat ggtgctgaat tttccggatt cccccacagc
    27661 gacacagttt aaaaaactgg ctgagctttg tgcctttatt catagtgatt tgctctttat
    27721 cctgcactta cctaaatttt ccaaaacaat ggaaaaacag gcttggttca cgcaaattga
    27781 gctaaatctc gtgcaaatta actgccaaac accggaactt agcaaacttc cacaatgggt
    27841 cagtcatcga gcaaaagcga tgaatttgca aattgaaaat gaagcaaacc aactcctttg
    27901 ttatagctac gaaggcaatc tactggcgct taaacaggca ttacaactgc tacaactcaa
    27961 tgcaactgat ggaaaaatca cgctgacaaa agcccaagaa gtggttgaac actccgccca
    28021 atttactcca tttcaatgga ttgatgcatt atttgaagga aaaatccaaa gagctcaacg
    28081 cattttgtac catctgcaaa atgaagaagt acaagcggtc gttttattaa gaattgtgca
    28141 aaaagagttg atgattttac tcgaaatcac tcgcaaccca accgcagtcg tttccagcga
    28201 acaatcactt tttatcggta atttacgaac agaatttgac cgcttgaaaa tttggcaaaa
    28261 ccgcagacct ttttacaacc agatcactca acgactgact taccaaaaac tttacgccct
    28321 aatccaacaa ctggctgaat tagagcgtaa ggtgaaacaa gaatttagcg atgatatttg
    28381 gcaagaatta gagcgttttt ccgctcaatt tacctaacta atacttttct aaatcttcgc
    28441 taaacaactc cgcttcttca ctggcgatag agtgcttttc tgccgcccaa tcgcctaaat
    28501 caataatttg acaacgctcg ctacaaaacg ggcggtattt actttcttta ctccacacca
    28561 cttctttttc acaagtcggg cagtttacaa tagtttctgg cattcttttt ccttttttgc
    28621 taatgctaag tatttataat gtaaggcttg aacctgctct ttaattaaaa gcaagccctg
    28681 ttcaaatggc aagttatttt caatcacatc atcagcataa cttaatcttt cttcacggct
    28741 gacttgggct gccataatat ttttaatggt ttcaatttta ctgttatcac gtttggttgc
    28801 tctttccagt tggatttcag gagaaacatc aacaaccaat atacgatcac aatattcggt
    28861 gagcttattt tcaattaaaa gcggcacgac ccaaatcaca taacaagcgg tcgattcttg
    28921 caattttttt accatttctt ctcgaatggc ggggtgaagt aaattattga gccacgtttt
    28981 ttcctcttca ttgttaaaca caatttggcg aagtttagtg cgttctaatg ctttttcagc
    29041 ggttaagatc tcttcaccaa aatgctctac aatcttggct aaaagcggtg tacccggttc
    29101 aacaacttgg cgagccacca catcagcatc aattacctct accccaagag ctgaaaataa
    29161 atcagacact gtggttttgc cactgcctat tccaccggtt aagcctacaa cgtaagtcat
    29221 aaaaattgat tcctcaaaat aaaaacaaac caattctagt aattaatccc tctgctttca
    29281 agcattagca ccagcaacat cgctgtgcta ataaacggaa taaacgccaa ttttgctaat
    29341 ttctgctttt tcattagcca ataagccaag taataaccaa tccctagcag gctggcggtt
    29401 aatatcaata agagcatttt ttcgagccga aagagtgggg ataacgcaac caataacaac
    29461 atatcgcccg agccaaatgc ctccttttta aacataagct gtgaaaccaa gccaatcaac
    29521 aggcaaaaag caagggtaaa ggtaaaagtt tggtgttgga aatcggctaa actctcccat
    29581 aacaccaaca aaaatataag cacgaggtag cgaatatccg ttaggtaata gcacatatcc
    29641 agcagtgata aaaaacagag cagaataaaa atcgtgccga taatagggct ttccgagcag
    29701 agcataatca atggaaaaag gagaaaaaat agatttgccg atcggggttg tttcggttgt
    29761 agcaccgatt gagccaaaaa ctgttgctcg gttaagccaa tattcactaa tgaagttgtt
    29821 tcttggtaaa tttggcgatt gactcgaatg gcaaatcgag ggatctccgc tttgagccaa
    29881 accgcaatga agagggaaaa cagtattaac atcgctactc caccaaagcc cccatatcaa
    29941 aaatcggtaa atacagccca acaataatag tgccgacaat cacgcccatt atcaacatta
    30001 gcatcggttc taatagctga gacaaaatat caatttggta atctaatttt tgttggtaca
    30061 tctcactaat atgctcacac attttcgcca cattgccact tttctcccca acctcaagca
    30121 tttgtgccat ctcagcacca aacacattcg ggttgatccc ttgtgaaaat ttgtagcctt
    30181 gttgtaacaa attaagcata gtgccaattt cttgctgtaa aatcgggtca tcatttttct
    30241 cggataaaaa cgacctcaag gcaacatcaa gcggaatatg agcattcagc attaaggcaa
    30301 tattttggct gaaaaagata atgcgagatt gctcaataat tcggctaaac agtggcattt
    30361 tagcccatag agccattttc cactttgcga ctaacctgct cttttttgca aaaaacaggt
    30421 aaaaaatgac cgctagtagt aacgtgccaa gtaatactgt gccttgctca atcaagcatt
    30481 cggaaagggt aaataaaata tcggtaatga ggggtaaagt tttgtctttt gagccataaa
    30541 gttgggcaaa ctgcggtaca atcaaaacca atagcccgat agataaagcg agcgaaatca
    30601 gcaacacaat caccgggtaa aacaggattt tcttcacttt tttcgccaat ttttccaatt
    30661 tcgctcggct ttcagctaaa ttagtcagca taatgcccag ttttccgctt tgttcgccca
    30721 ttttgattag ctgaatttcc tgattggtca caaattcacc caatttctcc aacgattgtg
    30781 aaaaagcata gccactttca atatgctgaa tcagctcatt aagccataga taaaggcgga
    30841 tatttcggca gttttgcaac aacatagata atgcctgttt taacggcatg gcagaattaa
    30901 ccaacaatgc aagctgtgat agcaagctat tcacctcttc ttttttcggg tttgctgaaa
    30961 gcacaaaatt tcggctaatc cgaatatgct gataaccttg tgccagcaaa aggttttcca
    31021 acatgtctcg attcgttgcc aaccgcttgc cccgctgttt ttgcccaaat cggctctggg
    31081 cttgccaatg aaattcatag attttcgtca ttgcctaagc aatttctctt tttgtggttc
    31141 aaaatgaata tctgaggcgt tgtgttgcaa acagaactta aataaattct ctaaaatttg
    31201 gataatcgga tcgtttctat ccacttgttc cgaatgagcc aatgaatacg ccgtattctc
    31261 ctcataaatc tcactctgcc gactactctg ctcaggcgaa agggcattga gtaaaaactt
    31321 caattcatcg gaggaaatca aaacaggctc aatctgtttg tggtagataa acgcaaaaat
    31381 ctcacaggca ttgagatttt gcatatcatc aatccctagc caaagctgtt cttctgtttc
    31441 ttgcagcgga atggctaaat atcgcaataa aatctgcttt tcattgcaat ttttctgcca
    31501 ctgctctgct gaaatctcga tgaacctttg gctgtttaaa tccgttaccg aatactccat
    31561 tttgatttcc tcacctcaaa ttagccgttt ggtgtaacag ttgtgctaca gaaattagct
    31621 ggaaataggc tcgtatcatt gccactacaa cttgccgtcc aactaatcgt attatttgag
    31681 aacgacggtg ttaaggtata gccataacca ttcagagagc ctttgccggt taccgtaatc
    31741 acgccttttg ttaccgcaat tgagtttagg tatttagtgg tattactact ggttttattc
    31801 gcctgaatcc cattcgtgcc accggagcag ttatccaacc cgccactgtt gtaaatacag
    31861 acttcaacgt ctgatttata cgaagcagat gcttgtaata actccgataa cgccgccttt
    31921 tgggtgtatg agttatagga agggatcgca atagtggcaa gaatggcaat aatcgcaatc
    31981 acgatcatca actcaatgag ggtaaatgcc cgatgcagtt ggcgaatgcc aagcggtcta
    32041 aaatgtacaa ttttttgcat ataaattcct tataaattgc accaacaaat tgtggcgaat
    32101 caagtgtgca aattttttgc ctgctttgcg accggcaaat tttaattttt cgacgcagat
    32161 cgaaaaaata aaatttttat ctgtttatcc atacagtttt ttgttagaat ttgccaaatt
    32221 tactcaatta ggaatcaaga atggcaaaag cacctaaaac cgcttatgtt tgtaacgatt
    32281 gcggggctga atattcccgt tggatggggc aatgtaagga atgtaaggct tggaatacca
    32341 tcagtgaagt gcggttgatt tccagcaaag aagcggcgaa atctgaccgc tttagcggct
    32401 atgccggtga aacgtcaggc aaagtacaaa cgctgtctga catcagcttg caggaagtgc
    32461 ctcgctttag cagtggcttt aacgagctgg atcgtgtact cggtggcggc gtagtgccgg
    32521 ggtcagcaat tctgatcggc ggtcacccgg gggcggggaa aagtacgtta ttactgcaag
    32581 taatgtgcgg tttagcccaa catctgccaa cgctgtatgt caccggtgaa gagtcgttac
    32641 aacaagttgc aatgcgggca aatcacttag gcttaccaac ggcaaatctg aaaatgttgt
    32701 ctgaaacctc tgtcgagcat atttgcaata ttgcagatca agaaaagccc aaaattatgg
    32761 tgattgactc gattcaggtg atgcacttgt cggatattca gtcctcaccc ggcagtgttt
    32821 cacaagtgcg tgaatgtgca tctttcctta cccgctacgc caaaacccgc caagtggcga
    32881 ttattatggt tgggcacgtc actaaagatg gcacgcttgc cggcccgaaa gtgttggaac
    32941 acgccatcga tgcttccttg ctgttagaag gcgaatccga ttcccgtttc cgtactttgc
    33001 gtagccagaa aaatcgtttt ggtgccgtca atgaattggg cgtatttgcg atgaccgaac
    33061 aagggctaaa agaggttaaa aacccatctg cgattttttt aagccgtagc gaagagcaaa
    33121 cgccgggcag ttcggtgatg gtgttatggg aaggaacacg cccattgttg gttgaaattc
    33181 aagccttagt cgatcactca atgctggcaa accctcgccg tgtggcggtt ggcttagatc
    33241 ataaccgttt atcgctatta cttgcggtgc tacaccgaca cggtggcttg cagatgtcgg
    33301 atcaagatgt gtttgtaaat gtggtcggtg gggtgaaagt cacggaaacc agtgccgatt
    33361 tagccttaat tttggcgtta atttccagct tccgtaaccg tccattgccg caagatttgg
    33421 tgatttttgg ggaagtcggc ttagcagggg aaatccgccc ggttaccagt gggcaagagc
    33481 ggatcagcga agccgcaaaa cacggcttta aacgagcgat aattcctcac ggcaatgtcc
    33541 cgaaaaaggc aattaaagat atgcaggtgt tcaccgtgaa aaaactcagt gatgcgttag
    33601 atattctgta taatctctaa aatcaagaac cgcttgtaag tctgtcttac aagcggtctg
    33661 ttttaggtaa aaatttacga atgtgcggca gttggtctat tgcctttgga aatatagtat
    33721 aaattaatac acaccaccaa cgcatttaag ccggtgaccg gaatcgagcc aatcagcaaa
    33781 ccataaacaa cgaaacaggc acaacccagc gaattcacca cccgcagttt aatcacatct
    33841 tttaataaaa aagaacaggc aactaaaatc atcgccacat agccgagtat ttcaacatag
    33901 tccatttaga acctcctcaa ataaaataaa ctgccgatat tttaaaggct gtttttttat
    33961 ttgtatctag ctctaaaaat agcaaaggtt tgcgttcaca tttttacttt taaccgctta
    34021 gttattaaac agattttcgt tctaaacaca taaaacggca acggaaaggg ttattttcat
    34081 caatttctga ccacttttct tctactaacg cccaattttg ttcatcaaat tcaaagaacg
    34141 tatccccttc aatgtctgct tgaatctcag ttaaataaag tctttctgct agtggtaagg
    34201 cttgcttaaa cagttccccc ccaccaataa tcattatttc agctgtattt gcaaaatttt
    34261 tcgctaattc aaccgcttgt tcgagcgatt gtaccgcata agccccttcc accgtaaaac
    34321 ctgaacggga aagaataata ttagggcgtt ttggcaataa cctgccgata gattcatagg
    34381 ttttccgccc cataatcacc ggtttgccga gcgtgttttg gcgaaaccag gctaaatcta
    34441 ccggcaaatg ccacggcatt tggttatctt tgccaatcac cttgttgatt gttcgggcaa
    34501 caataatgct gattttcatt ttttctcctg ttatgcaaat tggtttgatt ttatatcaaa
    34561 ttaagcgtga ttttacaccc taaaagtgat acttttggca acattatttt tagttacaag
    34621 tgaacagatt atgtcaaaaa ctatcgtgat aaaatttggc accagcactc tcacacacgg
    34681 cactaaaagt ttaagccgtc cttatatgtt agagctggta aagctcaatt acaccaacag
    34741 catcgtgtga ttgtggtgac atccggagct gccgctgccg gtcgggacta tttaggacac
    34801 cctgaactcc ctaaaacctt agcctctaag caaatgttag cagcggtcgg gcaaagtcag
    34861 ctcattcgag tgtgggaaaa tttattcgat atttataata tccatatcgg gcagatgctc
    34921 ttaacccgag ccgatctgga cgatcgtgaa cgtttcctca atgcccgtga tacccttgat
    34981 gccctgcttg cacaaaaaat cattccggtg attaatgaaa acgatgccgt tgctaccgaa
    35041 gaatttaaag taggcgataa cgataattta tcggctttag ttgcgatttt ggctcaagca
    35101 gatcagctct atttattaac cgaccaagaa ggcttattca gtgccgatcc tcgctcaaac
    35161 cctgatgcta aattgctctc ggtggtggaa aaaatcacgc ctgaaatccg ccaaattgcc
    35221 ggtggtagtt caaccggttt aggcacgggc ggaatgagta ccaaaattac tgctgctgat
    35281 attgctaccc gctccggtgt ggaaaccatc atcgcctccg gttctcgccc aaatgtgtta
    35341 gttgatttag caaacgggca aaacatcggc agtaaatttt tagtccaatc tgaccgcttg
    35401 gaaggcagaa aacgctggtt atttgctgct ccgcaagtgg gtgaaattgt ggtagatttc
    35461 ggggcggaac aagccttgct tcaacataaa tcattactgc cggtgggagt ttctgccatc
    35521 aaaggcgaat ttactcgagg tgaagtaatc aaaattttca gccaagacgg caaagcctta
    35581 gcactcggca ttgcccgtta tagcagtgag gcattgctgc gaattaaagg taagaaatca
    35641 aaagaaattg aatcgctcct tggttatgaa tttggttctg ttgcagtgca tagtgacgaa
    35701 atggtggtgt attaatggaa ttgggaattg atgttttagc aatcttgttt gccgttgcga
    35761 cccttgccgg ctttatcgat gccatcgctg gcggcggtgg cttactcact attcctgcat
    35821 taatggcagc agggcttcct ccggcaatgg cacttggcac gaataaatta caggcgtgtg
    35881 gcggatcact ctcttcctca ctctatttta ttcgcaaaaa agctgttaat ttaaaacaaa
    35941 tttggttgct aattctatgc acttttttag gctctgccgc cggtactatt tttgtgcaaa
    36001 tgatcaatgt cgatttctta aaaacattgt tgcctttctt aattctgatt atcggcatct
    36061 attttttggt cagccctaaa attggcgatg aagatcgtaa acaacgcatt agctttaccc
    36121 tatttgcctt taccgccgct gtcgctctcg gtttttatga tggaatgttc ggaccggcaa
    36181 ccggctcttt tatgactctg gcatttattt tgctgctcgg cttcaacctc tctaaagccg
    36241 tagcacacgc caaagtgatt aattttacct ccaactttgc ctcattaatt ttctttacgc
    36301 ttggtggtgc ggtaatgtgg aaaatcggct taattatgat ggtcgggcaa tttattggcg
    36361 gcacactagg tgcgaaaatg gtgatgacaa aaggcaaaaa attaatccgt ccgatgctag
    36421 tgactatgtc ttttatgatg gtcggcaaaa tgctctacga gcaaggaatt tttaattaac
    36481 aatgaataaa gcaaaacgta ttgagatttt aacccgttta cgcaatgaaa atccaaaacc
    36541 gacaactgaa ctcaattaca gtaatccgtt tgaattatta attgccgtga ttctatccgc
    36601 ccaagcgacc gataaaggcg taaataaagc caccgataag ctcttccctg tcgccaacac
    36661 gccacaagcg attttagatt taggcgtaga tgggctaaaa gagtacatca aaactatcgg
    36721 cttatttaac agcaaggcag aaaatattat caagacctgc cgagatctga tcgaaaaaca
    36781 taacggcgaa gtgcctgaag acagagatgc cctcgaagcc cttgccggtg ttggcagaaa
    36841 aaccgccaat gtggtgatga ataccgcatt cggacaccct acgattgcag tcgataccca
    36901 tattttcagg gtgtcgaacc gcacgaactt cgctcccggc aaaaatgtag ttcaggtaga
    36961 agaaaaactg ctcaaagttg tgccggacga atttaaagtc gatgttcacc attggttgat
    37021 tttacacgga cgctacactt gcattgcccg taagcctcgt tgtggttctt gtattattga
    37081 agatttatgt gagtttaaag agaagacgga ataacattat ctggtggtat ttaatgaata
    37141 actcccctct ttagaaaagt aggggctggg ggagatttga tactatttca acatttcgta
    37201 tgagcgtata gaaattctgc caaatcttcc ctatcccctc tttgctaaag aggggaacta
    37261 gatcgagcgt aaaatataac aagcggtcat ttttttgaga ttttttgcaa atggatattt
    37321 atttagtcgg tggagcagtg cgggatcaac ttcttgggct gccagtgaaa gatagagatt
    37381 ttttagtggt tggcgcaact gccgaacaac ttttagccca aggatttcaa caagttgggg
    37441 cagattttcc ggtgttttta caccctgaaa ccaaagaaga atatgccctt gctcgccaag
    37501 aacgcaagaa cggcaatggt tacaacggct ttatttgcga tttctcccca aacgtcacgc
    37561 ttgagcaaga tttgatccgc cgagatttaa ccattaacgc catcgcccaa gatgaaaaca
    37621 gcacactttt tgatccttat ggcggtgtgc aagatttaga aaatcggcta ctccgccacg
    37681 tttctcctgc attcagcgaa gatccgctac gggtgctacg ggttgcccgc tttgccgccc
    37741 gttttcattc atttggtttt accattgctc ctgaaaccct gaaattaatg cgagagatgg
    37801 tacaaagcgg tgaattgaaa catttaaccg ctgaacgtgt gtggttggaa acacagaaag
    37861 cctttgaaac cgataatccg cacgtttatt ttgacatttt acgcttaatt ggggcattaa
    37921 aagtgctatt ccctgaactg gatcgtctgt ttggcgtacc acaaccacct caacaccacc
    37981 ctgaaattga ctccggcaaa cacactctaa tggtgctaca acaggcaaaa agacttgcaa
    38041 aaaaagcgga aaatccgacc gctttactct ttgcagccct ttgccacgac ttaggcaaag
    38101 gcttaacgcc tgctgatatt ttgcctcatc actacggaca cgaagtcaaa ggcattcaac
    38161 caacccgaga gttagccaat cggttaaaaa tcccaactga gattaaagat tttgcccttt
    38221 tagtgaccga ataccacacg cattgccata aaatggcgga acttcgccct gaaacggtaa
    38281 taaaactgtt taacagccta gatgtgtggc gtaaaccaaa ccgctttttt gatttcctgt
    38341 tcgcctgtga agcggatgct agagggcgat taggttttga acagcggaat tacccccaac
    38401 ctgaattggc gaaaaaatat taccaagccg caatcgaaat tgatgtgcag caagttattc
    38461 aagacggttt tgaaaaacaa gcaattcggg aagagctgaa taaacgcaga gtgtatgcgg
    38521 taagaagcat caagctagat agcgacctaa taaaccatta ggttatccgc cactttctca
    38581 aaatcaattc ccaaagttca agttggttaa atgtatggat tctttaaaag gtggcgttat
    38641 tttagtgaat ttataatgtt cctatgctct tgattgttgt agccacaatt tcagggtaaa
    38701 gatcagcaat aacccaatgc cgaaattggc aatagtgaag ccggctaacc caataaaaga
    38761 taaaggttca aattgataaa attcaatcgc acctcttgcc attgcagcta aaccaaatga
    38821 aaatgcccag aaacccatcg agaagccatt ttcagctatc catttgaggt ttcgtaaaat
    38881 aaaacagaat tgtaagaatc catatcccca taacattttt gccaacaagt ctaattctcc
    38941 acccatagaa aaataggcag aagcgcccac aaatgccgga gcaagaacaa ttcctaaaga
    39001 tggtctagca atcggaaaaa gcggactaag ccgaattctt tgtaacatag tgggttcata
    39061 tactaaccag gaaattatgc caatgcctaa aaataaagat gcaatttcac tgtagccaat
    39121 taagcttaat gaacttgcca tagtgaagct ccctgcaatt ggcggtaggt aatgtaccgg
    39181 gtgtagcgtt tccggcaaaa attgtgtgcc tttccataat ccaccaataa taaaaaccaa
    39241 gaaaattaaa tgcacaatga cgcctaaaaa aatcaatagt tcgcctaaat aaaaatccca
    39301 tacatagagc acatcaccgc ttatcatggt tgtcattgtc actaaggaaa ataaacaaca
    39361 ttgcactggg tgcataaatt ctgctttaat ctgctcaaaa caaaaaaaca cacgatacac
    39421 ataacagcct aataaggcta cccaaagtat gactgacgtt ccagcaatga tattaccaat
    39481 tgttgtagca taaggagtga taggcgttgc atttaaccag gcaaggccta acgcccccag
    39541 ccctaatggc attgcaaaaa agcctgtagt tattggaaaa ggtttagatt cactcataaa
    39601 tttatcctca tattgaaata atgcataact gtattcggct ttataacagt catatgtaaa
    39661 aaattttatt tttctaaccg cttgtaataa gaaaaaccta aagcacttgc tttaggttcc
    39721 tactactatt catactcttc tagccagata gttaaaatcg cttcaagaat atgttcattt
    39781 gatgcttccg gatcatcatc gaaatcttcc atttcacaaa tccatttatg catatctgta
    39841 aaacgaaccg tggtcgggtc taaatccggg ttcatatcat acagattttc agcgatcatt
    39901 cgggtatctg tccatttcat tagtgcgctg cctcatttgc gtgatttaaa ttatattttg
    39961 gaatttcaac aaccaaatct tcttcaccaa caatacattg gcaacttaaa cggctgtcta
    40021 tttccaatcc ccaagcttta tccagcatat cttcttcttg atctgaagta tcatttaacg
    40081 aatcaaaacc ctcacgaatt accacgtggc aagtggtaca agcacaagaa cagtcgcaag
    40141 cgtgatgaat ttcaacgcct gcttcgtgtg ctacttctaa taaattatct ccggctttag
    40201 cttcaacaac cataccttcc gggcaaaatt cttcgtgtgg aagaaaaaca atttttggca
    40261 ttttaaagtt tccttattac taatcccatt caatattatc cagatgttcg ccgatgaagt
    40321 ttaaaatctc ttcctcattt tcaaccagat aaacaataat cttctttaat tcccttgctt
    40381 tctctttact tttctcggaa agcggatagg taacataata acatcctacg tccggatctt
    40441 cttctaataa ctctaatagg cttggacgat aaatactaag ataagcccgt aaaaatgcag
    40501 cccagttata accgttcata taggcaacat catattcagt attaatccgc tcgcccaact
    40561 caaaaatgcg gttatcctct aaatcgaatt caaccgcaac ggttctgaat tgttctgaaa
    40621 tctcggtttt tacatagtta gacatactgc ctccttatgc taaatcgtcc atttttttac
    40681 cggctaatgc tttttgaatt gataaattca tacgccgtgc tgcaaattct tgcgtagcta
    40741 aatccacctc tttgatacct tgctgaattg caaagcgatc agtaccttct tttaattcga
    40801 ttaaacgggc taattgtgct tcaatcgctt ggaactcctc cacactcaac actgcagagc
    40861 catcttcttt caatgccgtt accacgctgt caatcactcg gtcggcttct actcgctgtt
    40921 caactaactg gcgggcttcc atatcttctt tggcatttgc cattgaggat ttaatcatct
    40981 gcgtaacttc ttcatcggtt aagccataag acggtttgat ttgaattgaa gcctgcactt
    41041 tggtcgattt ttccattgca gtcacgttta ataaaccgtc tgcatcaact tggtaagtta
    41101 cccgaacctg tgcaacccct gctgccattg ccggaatgcc acgcaaagtg attttaccga
    41161 gagagcgaca atcttcgact aattcacgct caccttgtaa aacgtggatt gtcatcgccg
    41221 tttgaccgtc tttaccggta gtaaactctt gagctcgagc tactgggata gtagtgttgc
    41281 gtggaataat tttctccacc aaaccaccca tcgtttcaat accaagcgaa agtggcacaa
    41341 catcaagcaa caacatatcg gaatccggtt tgtttccaac taaaatatcc gcctgcactg
    41401 ccgcaccaat ggcaacaact ttatccgggt cgatagaggt taatggcgtt ttaccgaaaa
    41461 actcgccgac ttgttcacgc acaaacggta cacgggtcga accgcctacc attaccactt
    41521 cacgaacctc ttctgcttca actccggcat ctttcaaggc tcggcgacaa gtcatcagcg
    41581 agcgttttac aagcggttga attagctcat taaattgcga acggcttact acgcctgtcc
    41641 aatttgcaaa tttcacttca aattcaaccg cttgcgaaag tgcgactttg gtttgagttg
    41701 ccaaagttaa taattcacgc tgctcgcttg ccgtttgagg tttgtaattt gcctgttcag
    41761 caatccattc cgctaatagg tggtcgaaat catcgccacc gagtgcggta tcacctgcgg
    41821 ttgctaatac ttcaaacaca cctttgcgta aacgcaaaat agataaatcg aaagtaccgc
    41881 cacctaaatc gtaaacggca atcacacctt cttgtccgct ttctaaacca taagcaatcg
    41941 ctgctgccgt tggttcattg agcaaacgta atacatttaa acccgcaaga cgtgcggcat
    42001 ctttggtact ttggcgttgt gcgtcatcaa aataagccgg tacggtaatt accacgcctg
    42061 aaagctcacc ggctaaacgc ttttcggcaa attgtgccaa gtggcttaaa atatccgccg
    42121 aaacttcaat cgggctttta ttaccttgcg ctgtttggat taaaggtaaa ccgttttcgc
    42181 tcgcgacaaa ttgataaggt aaattttgat aacgttgctg aacatctgcc agagaacgcc
    42241 caatgagacg tttagctgaa atgacggtat ttttcgggtc aagtgcagct ttggcaaagg
    42301 cttcaatccc aactgttttt tctgtttccg cataatgcac tactgacggc actaatgctc
    42361 tttcttgttc atcaagcaat acctgagtct gcccgctacg cacagttgcc actaatgaat
    42421 tggttgtacc tagatcaatt cctaccgcta atttatgttg atgtggtgca gcggtttgac
    42481 cgggttcaga aatttgtaat aatgccattt atttatctct ttatctttct aacttagttc
    42541 tctattgtat taaatggagt gaaatatatt gtttaagaga agctggagat tcccctctcc
    42601 ctgatttttc ttctgaacga agaaaaatct atccctctcc cacaagggga gagggttatt
    42661 ctttcaaaaa ttcaaaacaa ctaaaaaatt agcattctcc ttttgtagga gaaaatgttg
    42721 ttctttcaaa attctaaaat aaccgcaaaa ttaactctcg ccccttgtgg gagagagaca
    42781 gataaatcat tcgttcagaa tgatttatca gagagagggg gaattaccct ctcgtaattt
    42841 cataaaaaat tgtatctaaa acagcctcta gatcgctatg aatttgatta ttccaaaatc
    42901 ttaaaaccct gaacccctga ccgtttaaaa aatgagttcg tagattatca tagttttgtt
    42961 gatctaaatg ttgtgaacca tctaattcaa taactaattt cgctgaaaag caaacaaaat
    43021 cgacaatata gttacctata acttgttgcc gtttaaattt tatcgctaaa aatcgttttg
    43081 ctcttaatgc ttgccaaaga accttctctg cttctgtcat attagtccga agctgtttag
    43141 ctctttggca taaaattgct ttcatttttt attcctcttt tttaatttag tataaaagga
    43201 ataaaaaata taatttgagc gatttttgtg atctaaatcg aaaatcagaa aatttctttc
    43261 gttctaaaaa aataagctaa acagcctata tttcagcctc tcttacaaac acttaagcca
    43321 ccgaatatcc catattttca ggggcaaatt cgccttggta gtggcgttca atcggaacgg
    43381 cgattttact tgtaagatcc agcacttgat gcccttgtaa tttctctaca tcggtttgcc
    43441 agttttccca acgcaaatcc tgataaaaat ggtttaaatc tccggctaat gcccagccta
    43501 gaaattctga ataacctaat tgggtgtttt cccatttttt agcttttgga tgataataat
    43561 aaactttgcc aagatctgag ccgattccgc cggcattaat ggcaaaatag ccaccgattg
    43621 catcatccgc taccagcaag tggcttggtt gttcgccaga ttgtttaaaa gttttgccaa
    43681 agttccaatc aaataagcct cgaggcaatt tttcgttgcc tgagcctaaa atgcgtaacc
    43741 aaccgtggtc aataaatacg ccaccggttt catacaccat tgcccctagc ggtgagcgag
    43801 tagaaagttg cataccaacc aatgcactgc cggcatcttc agggtaactc gctaaaattt
    43861 cgtaatgatt tttggcttgg gtaaaccagt ctcttaaaat taaccaagcc gattgtttat
    43921 ctaataattg ttctaaattt ttcatttgca aaatttcctt agaatttgac cgcttgcgaa
    43981 aaccatacaa atgtaggatt aatagtcaaa gaatttttct tctactttct caatctgaat
    44041 aattaatttt ttaaagtaac ggagcttgtc ggttaacgca ttggcttttt gccagtcggc
    44101 tgtatttaac gtttgttcaa gctgttctaa tactgctttt tgttccgctt taatctgttt
    44161 taaaaagacg gtcagttcgg tttcgtcttt acgatgctca atggtttcca gtttttcgtg
    44221 ccattcgagt tgctgcatta agaaatccac atctcgcata cttttttctt cgagattttt
    44281 ggcttcacct gtatggattt caatcatcgc ttctgcccgt aaaatcggat ctttaagaat
    44341 attgagtgcc tcattgacat cagcagattt ttgcaccgct tctaactgtt cagcacttga
    44401 tttgtgggca aagttatctg ggtgaagctg tttctgtaaa gcaagataac gctcagaaag
    44461 ctgggcgtta tcaagttgaa attgaacggg taaatcaaat aaagtaaaag ggttattcat
    44521 tacagttcct tacacactaa aactttcgcc acagccgcat tcgtttttaa cattcgggtt
    44581 ggtgtattta aagccttcgt ttaagccttc tttcacaaaa tccagctgcg taccgtttaa
    44641 gtaagtcagg cttttttcat cgacaataac ttttacgccg tgttgttcga aaacctgatc
    44701 gtcttcattt aatacatcaa caaattcaag cacataggca agccccgaac aaccggaagt
    44761 tttcacacca agccttagcc cgataccttt acctctgttt tctaagaatg tacgaactcg
    44821 gtttgcggca gcttctgtta aggtaatgct catagttttc cttatgtgaa tggattaaat
    44881 caagatagaa atagcaaatg caagcggtta aattttgcaa attttttgca aaaatcgacc
    44941 gcttgcattg attgtatcat attacttagc ttgtttctct ttgtagtctg caattgcagc
    45001 tttgattgca tcttctgcta agattgaaca gtgaactttt accggtggta attctaactc
    45061 ttcagcgata tcactgtttt taatcgcacc tgcttcctct aatgatttac cttttaccca
    45121 ttcggtaatg agagaacttg atgcgattgc agaaccacaa ccgtatgctt taaagcgtgc
    45181 atcttcaatg ataccttgat cgttcacttt aatttgtaaa cgtaaaatat caccacaagc
    45241 cggtgctccc accatacctg taccggtgtc tgatgcttct ttatcaaaag tccctacgtt
    45301 gcgtgggttt tcgtaatgat caattacttt ttcgctatat gccatttttg tattcctttt
    45361 atttcctatt tccggcgaaa cctatttcgc ccctacattc aatttactat ttgtgatgaa
    45421 agcttatttt gtaggggcaa atattatttg cccttgcaaa atttttctga attagtggtg
    45481 attccattcg attttagaca aatctacacc ttctttgaac atttcccaaa gaggcgaaag
    45541 ctcacgcaat ttcacgatag cttttttcac gatttcaata gtatgatcga tttcttcttc
    45601 agtcgtccaa cgacctaaag tgaaacggat tgagctgtga gctaattcat cgtcacgacc
    45661 gattgcacgt aacacataag atggctctaa acttgcagaa gtacaagctg aacctgatga
    45721 tactgcgata tcacgtaatg acatcattaa cgattcgccc tcaacaaagt taaagctgat
    45781 gtttaggttt gaaccgatac gtttgccttc ttccattgaa ccgtttacat atacttcttc
    45841 aatatcttta aagccgttat ataaacgatc acgtaacacg gttaaacgag ccatttccgt
    45901 tgccatttct tctttagcga tacgatatgc ttcacccata cctacaattt ggtgaacagg
    45961 caatgtaccc gaacgcatac cacgctcgtg accgccaccg tgaataattg cttctaaacg
    46021 cacacgtggt ttacgacaaa catatagacc gccgatacct tttggtccgt ataatttgtg
    46081 gcttgagaaa gacattaaat caacatttaa gtcttgtaca ttcacttcga ttttaccaac
    46141 agactgggtc gcatcaacgt ggaaaatgat tttcttcgca cggcagattg caccgatctc
    46201 tttaatcggt tggattacgc ccatttcgtt atttacgtgc attaccgaaa ctaaaattgt
    46261 gtccggacga atagccgctt ttaatttagc taaatctaaa ataccgtctt cttcagggtc
    46321 taagtaagtc acttcaaaac cttcacgctc taactgacgg caagtatcta atactgcttt
    46381 atgttcggtt ttaacagtga taatgtgttt acctttggtt tgatagaaat gagccgcacc
    46441 tttgatggct aagttatccg actctgttgc accagaagtg aaaacgattt cacggctgtc
    46501 tgcaccgatt aaatcggcaa tttggttacg agccacatca accgcttctt ccgcttccca
    46561 accaaatttg tgtgagcgag aagcagggtt accaaagata ccgtctttgg tcatatattc
    46621 catcattttt ttcgcaacac gttcgtccat tggtgtggtt gctgcgtaat ccaaataaat
    46681 tggtaatttc attgttactc ctagttaaaa caacccaagc ggtcattttt gataaaaaat
    46741 ttgcaattag tgatgatgag gatgatcgtg acaatgctct ttttcacaat cgtgatcagc
    46801 gtgttctgcg gctaaatccg caactgaaat tgtccctaaa aactgctcaa tttgatcttc
    46861 taaccgctcc cacaaagaat gcgttaaaca ctgagaatct ttacggcaat taccactacc
    46921 tttacatttg gtgacatcaa tattttcatt cacggcggag atgatcatac ccacgctaat
    46981 ctcttccggt tttttaccta attgataccc accacccggt ccacgaacgc tctgcacgat
    47041 accgtcacgg cgaagttgag caaacagttg ctctaaataa gacagtgaaa tcgcttggcg
    47101 atctgaaata tcggctaagc taaccggctc tagttttccg tgtaaagcaa tatctaaaat
    47161 ggcggttact gcataacgcc cttttgaggt aagcttcata aaatatcctc attgattatc
    47221 cagaaaatct tctgaaacag ttgctaaatt ttgatatacc ccaccaattt agtcaatcat
    47281 ttaggactaa ttagtgtaaa aggttttata tattaaaaca gattaaaaca ataacgctga
    47341 ttatacgaaa aaagagccga aaataccaaa ataccaaaga taaacagttc atagaccgca
    47401 caatttcact cttatttgct cctaactgat cggaacagtt gaaatttaat tgatagagag
    47461 tacttcgaca cat
//
LOCUS       DANLXD010000003        45113 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.003, whole genome shotgun sequence.
ACCESSION   DANLXD010000003 DANLXD010000000
VERSION     DANLXD010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 45113)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 45113)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..45113
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.003"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            99..602
                     /locus_tag="PXD18_000129"
     CDS             99..602
                     /locus_tag="PXD18_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-activating lysine-acyltransferase"
                     /protein_id="HDL6300605.1"
                     /translation="MNQSYFNLLGNITWLWMNSSLHKEWSCELLARNVIPAIENEQYM
                     LLIDNGIPIAYCSWADLNLETEVKYIKDINSLTPEEWQSGDRRWIIDWVAPFGHSQLL
                     YKKMCQKYPDMIVRSIRFYPKQKELGKIAYFKGGKLDKKTAKKRFDTYQEELATALKN
                     EFNFIKK"
     gene            618..3479
                     /locus_tag="PXD18_000130"
     CDS             618..3479
                     /locus_tag="PXD18_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RTX family hemolysin"
                     /protein_id="HDL6300606.1"
                     /translation="MGTRLTTLSNGLKNTLTATKSGLHKAGQSLTQAGSSLKTGAKKI
                     ILYIPQNYQYDTEQGNGLQDLVKAAEELGIEVQREERNNIATAQTSLGTIQTAIGLTE
                     RGIVLSAPQIDKLLQKTKAGQALGSAESIVQNANKAKTVLSGIQSILGSVLAGMDLDE
                     ALQNNSNQHALAKAGLELTNSLIENIANSVKTLDEFGEQISQFGSKLQNIKGLGTLGD
                     KLKNIGGLDKAGLGLDVISGLLSGATAALVLADKNASTAKKVGAGFELANQVVGNITK
                     AVSSYILAQRVAAGLSSTGPVAALIASTVSLAISPLAFAGIADKFNHAKSLESYAERF
                     KKLGYDGDNLLAEYQRGTGTIDASVTAINTALAAIAGGVSAAAAGSVIASPIALLVSG
                     ITGVISTILQYSKQAMFEHVANKIHNKIVEWEKNNHGKNYFENGYDARYLANLQDNMK
                     FLLNLNKELQAERVIAITQQQWDNNIGDLAGISRLGEKVLSGKAYVDAFEEGKHIKAD
                     KLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERVQTGKYEYITKLNINRV
                     DSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIIAKLGEGDDNVFVGSGT
                     TEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKALHEVTSTHTALV
                     GNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVDT
                     IDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRKGDGNDIIT
                     DSDGNDKLSFSDSNLKDLTFEKVKHNLVITNSKKEKVTIQNWFREADFAKEVPNYKAT
                     KDEKIEEIIGQNGERITSKQVDDLIAKGNGKITQDELSKVVDNYELLKHSKNVTNSLD
                     KLISSVSAFTSSNDSRNVLVAPTSMLDQSLSSLQFARAA"
     gene            3554..5680
                     /locus_tag="PXD18_000131"
     CDS             3554..5680
                     /locus_tag="PXD18_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_063101322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HDL6300607.1"
                     /translation="MEANHQRNDLGLVALTMLAQYHNISLNPEEIKHKFDLDGKGLSL
                     TAWLLAAKSLALKAKHIKKEISRLHLVNLPALVWQDNGKHFLLVKVDTDNNRYLTYNL
                     EQDAPQILSQDEFEACYQGQLILVTSRASVVGQLAKFDFTWFIPAVIKYRKIFLETLI
                     VSIFLQIFALITPLFFQVVMDKVLVHRGFSTLNIITVALAIVIIFEIVLSGLRTYVFS
                     HSTSRIDVELGAKLFRHLLSLPISYFENRRVGDTVARVRELDQIRNFLTGQALTSVLD
                     LLFSFIFFAVMWYYSPKLTLVILGSLPCYILWSIFISPILRRRLDEKFARSADNQAFL
                     VESVTAINMIKAMAVAPQMTDTWDKQLASYVSSSFRVTVLATIGQQGVQLIQKTVMVI
                     NLWLGAHLVISGDLSIGQLIAFNMLSGQVIAPVIRLAQLWQDFQQVGISVTRLGDVLN
                     SPTEQYQGKLSLPEIKGDISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSG
                     KSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIAL
                     SDPGMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNN
                     PKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEI
                     VEQGKHHELLQNSNGLYSYLHQLQLN"
     gene            5692..7128
                     /locus_tag="PXD18_000132"
     CDS             5692..7128
                     /locus_tag="PXD18_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_140441352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HDL6300608.1"
                     /translation="MKIWLSGIYEFFLRYKNIWAEVWKIRKELDHPNRKKDESEFLPA
                     HLELIETPVSKKPRLIAYLIMLFLVVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPI
                     ENAIVQEIFVKDGQFVEKGQLLVSLTALGSDADIKKTMASLSLAKLENYRYQTLLTAI
                     EKESLPVIDLSRTEFKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKEAEKQTI
                     FAYVRKYEGATRIEQEKLKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNE
                     LENDLLNVKEELELITQFFKSDVLEKLKQHIENERQLRLELEKNNQRRQASMIRAPVS
                     GTVQQLKIHTIGGVVTTAETLMIIVPEDDVLEATALVPNKDIGFVAAGQEVIIKVETF
                     PYTRYGYLTGRIKHISPDAIEQPNVGLVFNATIAIDRKNLTSPDGRKIDLSSGMTITA
                     EIKTGERSVMSYLLSPLEESVTESLRER"
     gene            7369..8367
                     /locus_tag="PXD18_000133"
                     /pseudo
     CDS             7369..8367
                     /locus_tag="PXD18_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250818.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
     gene            8384..9127
                     /locus_tag="PXD18_000134"
     CDS             8384..9127
                     /locus_tag="PXD18_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6300609.1"
                     /translation="MKQKYIYGLAGLLLLLLGWQLGTALLSQRLPMASMLAPAKTWES
                     FTWLISSGEIFPHLWASLQRIAVGLLAALVIGVPLGLLLGFSKHLEMLCTPSFQLLRM
                     ISPLSWMPIIVMLLGVGDLPIYFLLAFATVWSLIISTTSGVKSIDPQWLQLGRVMSAT
                     RKELLCKIVVPAITGHVLTGLRVAVGIAWVVLVPCEMLGVNQGLGYFILDTRDRLAYS
                     ELMAVIIIIGLIGWALDSLIRLALAKGGR"
     gene            9282..10340
                     /locus_tag="PXD18_000135"
     CDS             9282..10340
                     /locus_tag="PXD18_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HDL6300610.1"
                     /translation="MSVLSSSFIQWLQQNAENLDQSNERADLLIPQIAALGLYKIGVP
                     ETLGGSGGTLVDAIKAVTELGNHSLAAAFVSWGHRTFIEHIIASKNPIPRQSYLADLL
                     NGNLTAGTGLSNAMKFLSGIEELNVNIREENGKRYLNGRLPWVTNLRSYRFVASFVAG
                     FQDERKPLVIAIPSTAKGLTRTKELEFIALQGTNTTSLVFENVELQDEWILADDAPEF
                     LAATRPAFLGLQFGLPFGLVERSLAEIEKSLPFRAILASEWQAQVDALNDIKTRLFNG
                     LNEEGYFVRNPKELFQARIDIVNVVAQTILLELQASGGRGYLKNDTSGFSRRWKEAAF
                     LPVVTPSAVQLRMVLANS"
     gene            complement(10461..11003)
                     /locus_tag="PXD18_000136"
     CDS             complement(10461..11003)
                     /locus_tag="PXD18_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDL6300611.1"
                     /translation="MSQFQIHTIESAPETAQEALKAVQQANGFIPNLIGVLANAPTAL
                     ETYRTVGGINSRNSLTAEEREVVQITAAVVNGCGFCVAGHTKIALKALKMPEEVVNAL
                     RATARIDDNKLDTLARFTLAVMLQKAKLTEAQLNEFFAAGYNQQNAIDVILGVSLATL
                     CNYVNNIAEIPINPELQPFA"
     gene            complement(11155..12666)
                     /gene="glpK"
                     /locus_tag="PXD18_000137"
     CDS             complement(11155..12666)
                     /gene="glpK"
                     /locus_tag="PXD18_000137"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HDL6300612.1"
                     /translation="MEKQYIIALDQGTTSSRAVLLDKNANVVEVAQREFTQIYPQAGW
                     VEHNPMEIWSSQSSTLNEVVAKAGIKPDSIAAIGITNQRETTIVWEKETGKPVYNAIV
                     WQCRRTSDITDKLKADGHEEYIRKTTGLVVDPYFSGTKVKWILDNVEGAREKAERGEL
                     LFGTVDTWLVWKLTQGRVHVTDYTNASRTMLFNIHTKQWDDKMLELLNIPRSMLPEVK
                     NSSEVYGQTNIGGQGGVRIPVAGIAGDQQAALYGHLCVKEGQAKNTYGTGCFMLMHTG
                     NTAIQSENGLLTTIACNAKGEPEYALEGSVFIAGASIQWLRDELKIVHDSFDSEYFAT
                     KEDDSNGVYVVPAFTGLGAPYWDPYARGSIFGLTRGANRNHIVRATLESIAYQTRDVL
                     EAMQSDSKAKLQALRVDGGATANNFLMQFQADILDTKVERPKVKEVTALGAAYLAGIA
                     VGFWKDLEELKDKAEIERTFTPDGDQEKRAKRYKGWKKAVRRSLEWAKEDAEE"
     gene            complement(12670..13455)
                     /locus_tag="PXD18_000138"
     CDS             complement(12670..13455)
                     /locus_tag="PXD18_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin family protein"
                     /protein_id="HDL6300613.1"
                     /translation="MSKSLRNACIGEFIGTGFILFFGAGCVAAAQVAGANFGLWEISI
                     VWGLGVSMAIYISAGISGAHLNPAVTIALAAFYGFEKHKILPYVIAQVAGAFCSVALI
                     YFMYSDLFTAAEAAQGITRGETVGFAGVFSTYPNPNITLVTAFIVEFVITVVLMSTIL
                     AIGDDKNGLPNKALAALLIGLLIAVIGGATGPLTGFAMNPARDFGPKLFAYLAGWGEI
                     ALTGGKEIPYFIIPIVAPICGALFGAWGYKNLIHNNLPANTQE"
     gene            13668..14027
                     /locus_tag="PXD18_000139"
     CDS             13668..14027
                     /locus_tag="PXD18_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CrcB family protein"
                     /protein_id="HDL6300614.1"
                     /translation="MISIGAVLGAMCRWQLAVWLNPILSQFAFGTLAANWLGCLLIGI
                     AMGFNLGESQRLLFISGFLGSFTTFSSFSLELTEKLLAEKWGQFVTVLSLHLIGGLLL
                     TLIGVMLARAVTSGRFC"
     gene            complement(14075..15397)
                     /locus_tag="PXD18_000140"
     CDS             complement(14075..15397)
                     /locus_tag="PXD18_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDL6300615.1"
                     /translation="MSAMFIIQFAIVLLCILVGARVGGIGLGVFGGLGLAILSFGFGL
                     KPAGLPIDVMFMIMAVVSAAAAMQAAGGLDYMIKIATRILRKNPKYITFIAPLVTWTF
                     TVLAGTGHVAYSVLPVIAEVSRHNGIRPERPLSMAVIASQFAIVASPIAAAVVAVVAF
                     LEPQGVTLGNVLSVTIPATLLGLGLACVFVNKMGKELKDDPNYQRLLQDPEYVKENHI
                     TTNPTELPLKPTAKLSVGLFLFGALLVVLMGAIPALRPVFDGKPMGMAHTIEIVMLSI
                     GALIIFFCKPDGNEITKGSVFHAGMRAVIAIFGIAWLGDTLMQGHMDEVKSMVSGLVE
                     TAPWAFAFALFVLSVLVNSQGATVATLFPVAIAIGIPAPVLIGVFVAVNGYFFIPNYG
                     PIIASIDFDTTGTTRIGKYIFNHSFMLPGLLSMIFSIGFGLLLSNILL"
     gene            15546..16370
                     /gene="dapF"
                     /locus_tag="PXD18_000141"
     CDS             15546..16370
                     /gene="dapF"
                     /locus_tag="PXD18_000141"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HDL6300616.1"
                     /translation="MQFSKMHGLGNDFMVVDGVTQNVYLTEEMIRTLSDRHRGIGFDQ
                     LLLVEPPYDPELDFHYRIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDIHVSTAKG
                     KMVLSLQEDGKVRVNMGEPIWEPSQVPFTANKFEKNYILRTELQTVLCGVVSMGNPHC
                     VLQVDDVKTAPVNELGPLLESHERFPERANISFMQVVNRNHVKLRVYERGAGETQACG
                     SGACGTVAVGIMQGLLDNKVQVDLPGGTLIIEWQGVGHPLYMTGDATHIYDGFIKL"
     gene            complement(16541..17083)
                     /locus_tag="PXD18_000142"
     CDS             complement(16541..17083)
                     /locus_tag="PXD18_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase family protein"
                     /protein_id="HDL6300617.1"
                     /translation="MAQVYIVHGYTANADKHWFPWLEQELAKCGVSCERLNMPDSAKP
                     SLDGWLNHLAQNVELTDQTVFVGHSLGCIAILNFLAKNYAKIKGAVFVSGFYQPVENL
                     PELSAFTNYYAILPSVSSFPSYVVSALDDKVVNHQYSDALAQHLHADYIRLNQGGHFL
                     DREGVTELPVVLELVKKLLE"
     gene            17207..17530
                     /locus_tag="PXD18_000143"
     CDS             17207..17530
                     /locus_tag="PXD18_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QacE family quaternary ammonium compound efflux
                     SMR transporter"
                     /protein_id="HDL6300618.1"
                     /translation="MNVWILLAISICLEIAATNLLKLSNGFTKAIPTIGSLALYGLSF
                     YFLSIIFRTLPVGIVYAIWSGVGIVLTALVAYFAFGQKIDLAGLIGISLIIAGVLVIN
                     LFSKV"
     gene            complement(17593..19038)
                     /gene="xylB"
                     /locus_tag="PXD18_000144"
     CDS             complement(17593..19038)
                     /gene="xylB"
                     /locus_tag="PXD18_000144"
                     /EC_number="2.7.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HDL6300619.1"
                     /translation="MYIGIDLGTSGVKVVLLDENQHIIAITQKSLPIFRPHPLWSEQN
                     PQDWWNATNEAMLELSATQDLQAVKAIGLTGQMHGATLLDNADNVLSPAILWNDGRSF
                     MECEELEQLVPNSREITGNLMMPGFTAPKLRWVDKHQPDIAEKVSKVLLPKDYLRLLM
                     SGEYASDMSDASGTMWLDVGKRNWNKSLLNACGLDIENMPKLFEGNQITGYLRPTLAE
                     QWKMKSVPIVAGGGDNAAGAIGIGLYQTGQAMLSLGTSGVYFVVSDKFQANPQKAVHS
                     FCHALPDRWHLMSVILSAASAVDWAVKSLGLKDVSTLFQQVEASQTASDAIFLPYLSG
                     ERTPHNDPYAKGVFWGLSHNDNQITMAKAVIEGVSFALAEGIEVLHETGVVADNIALI
                     GGGAKSVYWRQLLADISGKTFEYRTSGDVGPALGAAKLAQIALNPNQDIATFCQPLPL
                     EQVYQPTPARYAEYQQKRQKFTELYRRLKGL"
     gene            complement(19191..20510)
                     /gene="xylA"
                     /locus_tag="PXD18_000145"
     CDS             complement(19191..20510)
                     /gene="xylA"
                     /locus_tag="PXD18_000145"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HDL6300620.1"
                     /translation="MSNYFDKISKVQYEGANSTNPFAFKHYNPDEVVLGKTMAEHLRL
                     AVCYWHTFCWTGNDMFGVGSLDRSWQKTGDLLQGAKQKAEIAFEFFQKLGIPYYCFHD
                     VDVAPEGNNFKEYQHNFNTIVDILEQKQAETGVKLLWGTANCFTNPRYMSGASTNPNP
                     EVFAWAAAQVFTAMNATKRLGGENYVLWGGREGYETLLNTDLKREREQIGRFMQLVVE
                     HKHKIGFNGTLLIEPKPQEPTKHQYDYDVATVYGFLKQFGLEKEIKVNIEANHATLAG
                     HTFQHEIATATALDIFGSIDANRGDPQLGWDTDQFPNSVEENTLVMYEILKAGGFTTG
                     GFNFDAKIRRQSTDPYDLFHAHIGAIDVLALSLKRAAKMLEDQALQKVVDNRYAGWNQ
                     DLGLQILNGKASLEDLAKIVETQGLDPKPVSGQQEYLENLVNSYIYR"
     gene            20752..21753
                     /gene="xylF"
                     /locus_tag="PXD18_000146"
     CDS             20752..21753
                     /gene="xylF"
                     /locus_tag="PXD18_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005576719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL6300621.1"
                     /translation="MKLKSKLLAVATATLMVLSNASVAKDLKIGMSIDDLRLERWQKD
                     RDIFVNKAESLGAKVFVQSANGDATAQISQIENMLNKDIDVLVIIPFNGEVLSNVIAE
                     AKKEGVKVLAYDRLINNADVDFYVSFDNEKVGELQAKSIIGQKPEGNYFLMGGSPVDN
                     NAKLFRKGQMKVLQPLIDSGKIKVVGDQWVDSWLAEKALQIMENALTANKNNIDAVVA
                     SNDATAGGAIQALSAQGLSSKVAISGQDADLAAIKRIIAGTQTMTVYKPITNLADKAA
                     EIAVALGKDEKVEMNAQLNNGMKEVPAYLLEPVVVTKENIDDTVIKDGFHTKDAVYK"
     gene            21820..23334
                     /gene="xylG"
                     /locus_tag="PXD18_000147"
     CDS             21820..23334
                     /gene="xylG"
                     /locus_tag="PXD18_000147"
                     /EC_number="7.5.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter ATP-binding protein"
                     /protein_id="HDL6300622.1"
                     /translation="MAKLLEMKNITKKFGEVVALNNISISLETGEILSLCGENGSGKS
                     TLMKVLCGIYPAGDYEGEIYFSGEKLIARNIKDTEEKGISIIHQELTLVKNMSILENM
                     FLGNEITKSGITDDNEMYLRCKTLLEQVQLDIDPNTKVGELGLGQQQLVEIAKALNKQ
                     VRLLILDEPTASLTEKETEILLSLIKDLQAHNIACVYISHKLNEVKAISDKICVIRDG
                     EHIGTRSAEGMSEDDIITMMVGREITSLYPHEPHNIGEEVLRVENLTAWHPTNTHIKR
                     VDNANFVLRQGEILGIAGLVGSGRTEMAQCIFGSYQGKYQGDIFLHKQPIKIKNCAQA
                     IENHIVMVPEDRKKHGIIPIMGVGKNITLSSLPQFCFGKKVINEPLEETIINQSIAKL
                     KVKTSSPELAIGRLSGGNQQKAILAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQ
                     LAKEGMAIIVISSELPEVLGISDRVLVMHQGKIKADLINQDLTQEKVMEAALKE"
     gene            23338..24465
                     /locus_tag="PXD18_000148"
     CDS             23338..24465
                     /locus_tag="PXD18_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HDL6300623.1"
                     /translation="MNKLKSINLQVYIMLIAIVVIMSFFSIATDGAYLSARNISNLLR
                     QTSITGILAIGMVFVIISAEIDLSVGSLMGLLGGFAAISNVWWGWPLSLTIIVTLILG
                     VMLGAWSGWWVAYQKVPSFIVTLAGMLAFRGVLVGLTNGTTVSPISNEMTTIGQGYLP
                     DMVGMILGTIGIFCFIVWGSYQRKARQKLNLTVPSMSKDTLKYGLVAIIVLGAIYLLN
                     DYRGVPFPVLVLVILAIAGTFLARKTAFGRHIYAIGGNIDAARLSGISVEKVKLAIFA
                     LNGLLVAIAGLILSSRLGAGAPSAGQNAELDAIAACVIGGASLAGGIGSIYGVVIGAF
                     IIALLDNGMSMLDVPTFWQYIVKGGILLLAVWVDTISKKKA"
     gene            complement(24481..25011)
                     /locus_tag="PXD18_000149"
     CDS             complement(24481..25011)
                     /locus_tag="PXD18_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6300624.1"
                     /translation="MSENSLKTHYSAKELAELSLACLPKTKQGVLYQAKKQGWTTHKK
                     VGVGGEILEFALSNLPQEIQTEIRSRFMSAVVEAKPKKLPAVRAEVDVGNLTTKQREI
                     ADARMALVAYVLELEGSMSRIKAITYLCNLAKQGEMPPHLVELVAVANAKKTAKRTIV
                     PIFSPIMPDFPLDSRD"
     gene            complement(25027..25290)
                     /locus_tag="PXD18_000150"
     CDS             complement(25027..25290)
                     /locus_tag="PXD18_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6300625.1"
                     /translation="MSTLEDIKKTAKDWHRADIIAALHKAGWSLRQLSLKHGYSQSST
                     LKNAVDRPWLKGERIIAEAIGISPEEIWPERYAQRNHKKFADR"
     gene            25474..25956
                     /locus_tag="PXD18_000151"
     CDS             25474..25956
                     /locus_tag="PXD18_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6300626.1"
                     /translation="MKIECKKVIGFGNRIEQSRKNAKLSRSEVCDALGGIAISTLQAW
                     EADTREPPISKLMALSQILNVEPCYLLTGERHSQSLNVTREPQPVYATKPQTEEGEVV
                     VIKAKLQEAIETLEEVLEITQREMKPAGKAQMVWAFYELLTQEKSEKEKMVGLLKLVA
                     "
     gene            25968..26219
                     /locus_tag="PXD18_000152"
     CDS             25968..26219
                     /locus_tag="PXD18_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300627.1"
                     /translation="MDKQAILKLFRDNSTAGNSQPSQEPIQVFNNSNVIIQNGDNATV
                     IAGCTVDNNTNLTCADKQRVHDLIHSLEQRNRASRDEGA"
     gene            complement(26509..28374)
                     /locus_tag="PXD18_000153"
     CDS             complement(26509..28374)
                     /locus_tag="PXD18_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HDL6300628.1"
                     /translation="MQSLLSFVPDFLKQELFWVMALLVFAIWQFIQNKLRMDVVALIV
                     MLFFSLTNILSVKEVLAGLSDPNVVLIALLFIVGEGLVRTGVANQVSDWLMRVSGASE
                     TKVLVLLMLCIAGLGSFMSSTGIVAIFIPVVLAICSGMGISPRRLMMPLSVAGLISGM
                     MTLIATPPNLVAHSELVKSGFEGFNFFSFTPIGLIILVMGIGYMLIARRWLDNGEQSN
                     THSQAQKFSMSQLIEEYQLKERAKMVLVEADSDCVGKSIGQLNLRIEQGLNIIAIQRT
                     KRFRKITVSASVNEIFQPKDILLLDTALDDETYQQRCEQLKLRPIELKGEYFSSQYRS
                     VGMAEISVMPEAECIGKTIRELKFRSRYHLSIVGLKRGDEIIQEELLDTPLKFGDILL
                     VMGVWQQIHRMDDDHRDFFLLRDPAESKNAPPALSQAPHALFSVLTMVLLMITGIVPN
                     VMAALIACLMLGKFRCVDMKSAYDSIHMPSIVLIVGMMPFSIALQKTGGVDLTVRLLL
                     DAMQGLDVHFVLIVLFVVTAIISAFISNTATAILVMPIAIAIANQLGYSPAPFVMTVA
                     VSASAAFMTPVSSPVNTMVLAPAGYKFIDFVKVGVPFTVLVMLVSVFVIPMLFPL"
     gene            complement(28514..29029)
                     /locus_tag="PXD18_000154"
     CDS             complement(28514..29029)
                     /locus_tag="PXD18_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MltR family transcriptional regulator"
                     /protein_id="HDL6300629.1"
                     /translation="MMDYIDKLSEETTLRGFLSIANQRFAKAVEQLIERVFRKTDFAL
                     KSVVDSLFEHQGPLADIEVRLKVLLGLGVISPKVFEDISLFLEVKQHLNEEEDEFAFS
                     HPAVVKFAKDLHHIDFLPINELLNMKASAANKDSMLFQMQQMRLEKMVRSSLILAVTE
                     IDEQLNVESPL"
     gene            complement(29041..30180)
                     /locus_tag="PXD18_000155"
     CDS             complement(29041..30180)
                     /locus_tag="PXD18_000155"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005557909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HDL6300630.1"
                     /translation="MNALHFGAGNIGRGFIGKLLADARIFVTFADINQTQIDQINQNK
                     QYGVKIVGDDSRVEIVKNIAAINSKDENAVIEQVKNTDLITTAVGPNVLGFIAPLFAK
                     ALVARVESGNTQPLNIIACENMVRGTTFFKGKIFEHLTAEQQAEIEKVVGFVDSAVDR
                     IVPPAEPNPADPLEVTVEEFSEWIVDQTQFKGDIPNIKGMELTDNLMAFVERKLFTLN
                     TGHLICAYLGKQAGVKWIKEAIAIEEIKTQVKATMEESGAVLIKRYGFDPQAHSAYIE
                     KILKRFANPYLNDDVNRVGREPIRKLSENDRLIKPLRGTLEYGLPYQNLVKGVVMALQ
                     YRNEEDPQAVELAEFIANHGVAAAVEKYTGLTDQAVIAQVVELYQ"
     gene            complement(30284..32143)
                     /locus_tag="PXD18_000156"
     CDS             complement(30284..32143)
                     /locus_tag="PXD18_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICBA"
                     /protein_id="HDL6300631.1"
                     /translation="MSNLKVKVQGFGRFLSNMVMPNIGAFIAWGFITALFIPTGWLPN
                     ETFAKLVGPMITYLLPLLIGYSGGKLVGGERGAVVGAITTMGIIVGSEIPMFLGAMIV
                     GPLGGWAIKTFDKAIDGKVKSGFEMLVNNFSVGIIGMILAMLSFAFIGGIVTQISAAL
                     GAGVGALVEAGLLPVTSIIVEPAKILFLNNAINHGVFTPLGTAQAQEVGKSILFLIEA
                     NPGPGFGILLAYMFFGRGTAKQTAGSASIIHFLGGIHEIYFPYVLMSPRLILAVIAGG
                     ATGVLTNSLLGGGLIAPASPGSIFAILAMTAPGAHFAVVASVILSCAVTFAIASILLK
                     TQKGEASLEDAQAQTQAMKAESKGVVNGNINKIYVACDAGMGSSAMGASMLRKKVQAA
                     GLNIEVQNLAINDLPQDAQLVITHKDLTARATQRVATAQHLSLTNFLDSAFYDSLVAK
                     LANHQPQQAVQNTQNFANPVEEPQAEGLKLQAAQVFLGLQANSKEEAIRFAGEQLVKA
                     GFVQPSYVDAMFAREQMVSTYLGEGLAVPHGTSDAKDSVLKTGIVVCQYPNGVRFTDE
                     EDGVAKLVVGIAAKGNDHIQILSAITNALDDEQAMKTLTSTNDVEKVLALLSK"
     gene            32445..32995
                     /locus_tag="PXD18_000157"
                     /pseudo
     CDS             32445..32995
                     /locus_tag="PXD18_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005752768.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(33039..33974)
                     /locus_tag="PXD18_000158"
     CDS             complement(33039..33974)
                     /locus_tag="PXD18_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HDL6300632.1"
                     /translation="MNHLDSAKETLNLYAQQIITLNHRLSEEFNEVVNMILACQGRVV
                     VGGIGKSGLVGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDMVILISNSGETDD
                     VNKLIPSLKNFGNKIIAMTGNPYSTLGRNADVILNIGVEREACLNNLAPTSSTLVTMA
                     LGDALAIALMKARDFRPEDFARYHPGGSLGRKLLNRVRDVMVRKVPTASLDTTFTECL
                     SVMNEGRMGVAVIMQDDKLEGIITDGDIRRTLAKFGAESLNKTADEIMTRNPKTINDT
                     EFLAKAEDLMKELKIHSLIAVNDEGKVTGLMEFSS"
     gene            complement(33985..34782)
                     /locus_tag="PXD18_000159"
     CDS             complement(33985..34782)
                     /locus_tag="PXD18_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor"
                     /protein_id="HDL6300633.1"
                     /translation="MKPFERRQQILAYLAQHGRTEVDVLADYFKLTGATIRKDLTSLE
                     EDKKVLRTYGSVVLIDEEILEREEKINKEDKDDKPLAQKTGINLQQKQAIGQKAAELI
                     NEGNSIIFDAGSTVLQMIPHLKAFDNLSLMTNSLTIFNEILKLNKSYNLLISGGTFRE
                     KSASFHGYFAESAFIGSNFDILFIGTDGLDLDVGLTTFNEVYKVSSLMCDAANKIVLL
                     ADSSKFGRKSPNIVCGLEKIHTIITDEGLSQEMREQIKAKGIELLVV"
     gene            complement(34825..35472)
                     /gene="hxpB"
                     /locus_tag="PXD18_000160"
     CDS             complement(34825..35472)
                     /gene="hxpB"
                     /locus_tag="PXD18_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HxpB"
                     /protein_id="HDL6300634.1"
                     /translation="MQINSVIFDMDGVMIDSEPQWAEAQIAVLADLGINITEQDCEQL
                     TRGKRIDELSDTWIKKFQLSVSNQALSEAILAHGCAAIEQHGKALTGLYELLDFLKSN
                     QIKLAVATSSPPVVIKAVFDRLKLWDYFPIRCSAMDEEYGKPHPAVYLSAVKKLGIEK
                     QECIVIEDSVTGLIAAKAANLTTFLVNTDYQNEKFSIADKRMASLLDVIEKLKQH"
     gene            complement(35535..35915)
                     /gene="gutM"
                     /locus_tag="PXD18_000161"
     CDS             complement(35535..35915)
                     /gene="gutM"
                     /locus_tag="PXD18_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GutM"
                     /protein_id="HDL6300635.1"
                     /translation="MDSITLLIILAMIMWLLQAVLGWLQIKAFNQAFMEISKKGKVTV
                     GRNSGRFNPKSVIVLAFDDEKKVVDSLCMKGFSVFARPQKLASVIGLSLDQIVPEKIF
                     PSDKRSQFALKVAISSGYSCSDQK"
     gene            complement(36084..36872)
                     /gene="srlD"
                     /locus_tag="PXD18_000162"
     CDS             complement(36084..36872)
                     /gene="srlD"
                     /locus_tag="PXD18_000162"
                     /EC_number="1.1.1.140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbitol-6-phosphate dehydrogenase"
                     /protein_id="HDL6300636.1"
                     /translation="MNNEKKVAIVVGGGQTLGAFLSEGLADAGYRVVVADLNGENAQK
                     VAADINAKQGEGNAIGVQVDAADEPSVEALAKATDTVFGRADVLVYSAGTAKASPIWD
                     FNLNDFDLSVKVNLTGYFLTAKHFSRLMIRDGIKGRIIQINSKSGKVGSKYNSGYSAA
                     KFGGVGLTQSLALDLADKGITVHSLMLGNLLKSPMFQSLIPQYAAKLGIPESEVEQVY
                     IDKVPLKRGCDYQDVLNVLKFYAGEEAAYCTGQSINITGGQVMF"
     gene            complement(36920..37318)
                     /gene="srlB"
                     /locus_tag="PXD18_000163"
                     /gene_synonym="gutB"
     CDS             complement(36920..37318)
                     /gene="srlB"
                     /locus_tag="PXD18_000163"
                     /gene_synonym="gutB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIA"
                     /protein_id="HDL6300637.1"
                     /translation="MHRLSKRENIYMTIIYQTTFTKIGNFAQESLTDDMLITFKQGAP
                     ADLQDYCFIHNPSELSSPLEVGDIAEFDGVAYPITAVGSVASENLSALGHITFRFDGA
                     NDAEFPGSVHVIGTPPQGLTENSTLIIKRD"
     gene            complement(37363..38364)
                     /locus_tag="PXD18_000164"
     CDS             complement(37363..38364)
                     /locus_tag="PXD18_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIB"
                     /protein_id="HDL6300638.1"
                     /translation="MSNKAIYIEKGNGGWGGPLTLPVVEGKKVLYMTGGTRPAIVNKL
                     VELTGWEAVDGFKEGEPPAEEIGIAIIDCGGVLRCGLYPKRRIPTINIHSTGKSGPLA
                     EFIVEDIYVSAVKENNIRLIDADGSVPVATEQAKPTSSTTATAKEYDSSKKITEQSDG
                     LLAKIGMGMGSVAALFFQAGRDTIDTVLKTILPFMAFVSALIGIIIASGLGDVIAHGL
                     TPLANSPIGLVTLALICSFPLLSPFLGPGAVIAQVIGVLVGTQIGLGNIPPHLALPAL
                     FAINAQAACDFIPVGLSMAEAKQDTVRVGVPSVLVSRFLTGAPTVLIAWAVSAFIYQ"
     gene            complement(38395..38949)
                     /gene="srlA"
                     /locus_tag="PXD18_000165"
     CDS             complement(38395..38949)
                     /gene="srlA"
                     /locus_tag="PXD18_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725059.1"
                     /note="catalyzes the phosphorylation of incoming sugar
                     substrates along with their translocation across the cell
                     membrane; the IIC domain forms the PTS system
                     translocation channel and contains the specific
                     substrate-binding site; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIC"
                     /protein_id="HDL6300639.1"
                     /translation="MIEAITHGAEWFIGLFQKGGETLVGMINGILPLLISLLVVMNAL
                     IKFVGQDRIERLAQRSAGNPISRYLILPVIGTFVFCNPMTLSLGRFLPERYKPSYYAA
                     ASYSCHSMNGLFPHINPGELFVYLGIASGLTTLGLPLGPLAISYLLVGMFTNFFRGWI
                     TDFTTAFFEKRMGITLDREVHLSH"
     gene            complement(39187..39495)
                     /locus_tag="PXD18_000166"
     CDS             complement(39187..39495)
                     /locus_tag="PXD18_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HDL6300640.1"
                     /translation="MKKYIATMLLAFGLVHSSYAQEKTAQIETKQAEKTVVLHIPEMY
                     CQLCVYLVNKELRAVEGVISTKASMKERKATVVVKESVDNQALIQAVGNLKYTAKVIE
                     "
     gene            complement(39497..39865)
                     /locus_tag="PXD18_000167"
     CDS             complement(39497..39865)
                     /locus_tag="PXD18_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300641.1"
                     /translation="MNSSLKSYNHKFITMCVTAIVSAVTSTFCCIGPLVYLVFGISSP
                     WLMELNQLEFLQLPMLLISLAAFGYGFWLLNFSNKIICTKYFSRRTLVILYWVVSVVV
                     MFFLTYPYVLPYILEMWSGE"
     gene            complement(39840..40946)
                     /locus_tag="PXD18_000168"
     CDS             complement(39840..40946)
                     /locus_tag="PXD18_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005647785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HDL6300642.1"
                     /translation="MNKLIASLVASSCATAFAAPVQQNNFHTTTHTYEFTQSYDLVVP
                     QGSKGTTNLWIPLPSDTDYQTVKSIEFEGSYKNAYITENNAYGAKTLFATWDTDAPKR
                     DLKVKMVIQTQDREPMAQGALANYQMPEKITYSVDVLEYLKPTAHIKTDGIVKEYADK
                     IVGNEQNPLKKAELIHKWIVDNMERDNSVLGCGDGDVEKILTTKVLKGKCTDINSVFV
                     ALARASNIPAREVFGIRLGQAVKMGQYSKTAFGSSKDGVANESGGQHCRAEFYLAGFG
                     WVPVDSADVAKMRLAEKKDVDDADVQAVSKYLFGNWEMNWVGFNHGRDFDLYPQPELT
                     PLNNFGYPYAEVGGDPLNSFEAKEFGYEFISKEL"
     gene            complement(41186..42229)
                     /locus_tag="PXD18_000169"
     CDS             complement(41186..42229)
                     /locus_tag="PXD18_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDL6300643.1"
                     /translation="MQPINIAIAGAGFSSRVFHIPFLKQDARFNIVKVYERTSNNAAE
                     WLPNAETVRDFNALLTPEVDLVLITTPNQTHYAMVKESLLAGKHVLVEKPLVATVAEA
                     EELAELAKRQGKVLYVYQNRRWDSHIATAKSLMEQNLLGELVDCEIRFDRYAKEKNVK
                     VWKESGELGTGLVYDLGVHLIDQALYLFGKPEAVYADVRYQHEGALVDDNFDIQLYYA
                     NGFKVVLKASRYAREPSPTFVLHGKLGSYLKQTPDNQEDLLKNGVQPIGKDWNIEEKE
                     NWGILHTEVEGNVVRQPYRNAEVSYQNLFDDLYQAIAHNAEPIIKLEDVIFVLKVIES
                     VFESAKLGQKIYL"
     gene            complement(42333..42617)
                     /locus_tag="PXD18_000170"
     CDS             complement(42333..42617)
                     /locus_tag="PXD18_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300644.1"
                     /translation="MRYWLISLSILLSGCVVPVTPTGQAGIPMPIIIGVSDPLDSKEV
                     HICTLKPFTQEYRSEHSSRGRAKLNVQKQCRANHSEMFCEEKDIVCKTYD"
     gene            complement(42647..42832)
                     /locus_tag="PXD18_000171"
     CDS             complement(42647..42832)
                     /locus_tag="PXD18_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HDL6300645.1"
                     /translation="MKCRQATELISQSCDEKLRLQQHMRLQLHLLVCPKCRNFNKNTK
                     KLGKILRAYCNDKDAPF"
     gene            complement(42829..43395)
                     /locus_tag="PXD18_000172"
     CDS             complement(42829..43395)
                     /locus_tag="PXD18_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDL6300646.1"
                     /translation="MKSLSSTQIEEIRKQMVKFATLQLADKDLAEDVVQDALTNAYKH
                     SASFRREAALKTWIFAILKNKILDLLRTRKRHIPVSSLCEEEESPSAFFDRHDHWLEH
                     QDVTEWRGVAQSTYQKEFWAIFDICLNKLPAQQARVFMMREHLEMSSAEICQECEISL
                     SNLNVLLHRARLRLQECLSRNWFREESK"
     gene            43504..44457
                     /gene="msrP"
                     /locus_tag="PXD18_000173"
     CDS             43504..44457
                     /gene="msrP"
                     /locus_tag="PXD18_000173"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HDL6300647.1"
                     /translation="MKKLTIQDVTPETIFYQRRKIITALGLGIAASALPKVSMAETQR
                     HLQSLQFKPDPNKGLELTPENKVIGYNNFYEFGVDKSAPAKNAANFKTDPWTLEIGGE
                     VENPFSLNHQQLLNTFPLEERIYRFRCVEAWSMVVPWIGFELARLIEMAKPTSKAKYV
                     VFHTLYDPAQMPGQKNRLLGGGIDYPYVEALRLDEALNSLTLLSVGLYGKTLPPQNGA
                     PIRLVVPWKYGFKSIKSIVKITFAEKRPLTTWESLAPNEYGFYANVNPNVDHPRWSQA
                     SERVIGAGGLLSVKRQPTLMFNGYENEVANLYRGLDLKVNY"
     gene            44457..45041
                     /locus_tag="PXD18_000174"
     CDS             44457..45041
                     /locus_tag="PXD18_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfoxide reductase heme-binding subunit YedZ"
                     /protein_id="HDL6300648.1"
                     /translation="MLTWLRILIHLGCLLPLVWVAQLLYTGNETILGADPIKELEHFL
                     GYGAIVIFCIMFLLGIALQYLKKNQYQILRRPLGLWAFVWAALHISSYLLLELSLDVK
                     LFFSELAGRPYLILGAAAFFILSIMAITSLPMLKRKLGTRWGTIHQWAYPALVLAMVH
                     YYWSVKSVTFDPIIIGVLVLFIVAHKIQAKFAKK"
BASE COUNT        13374 a         9470 c         9243 g        13026 t
ORIGIN      
        1 caacaaaaaa caacaaaaaa cacgacaata agatcgagta atgattatat tatgttataa
       61 tttttgacct aatttagaat aattatcgag tgcaaattat gaatcaatct tattttaact
      121 tactaggaaa cattacttgg ctatggatga actcctccct ccacaaagaa tggagctgtg
      181 aactactagc acgcaatgtg attcctgcaa ttgaaaatga acaatatatg ctacttatag
      241 ataacggtat tccgatcgct tattgtagtt gggcagattt aaaccttgag actgaggtga
      301 aatatattaa ggatattaat tcgttaacac cagaagaatg gcagtctggt gacagacgct
      361 ggattattga ttgggtagca ccattcggac attctcaatt actttataaa aaaatgtgtc
      421 agaaataccc tgatatgatc gtcagatcta tacgctttta tccaaagcag aaagaattag
      481 gcaaaattgc ctactttaaa ggaggtaaat tagataaaaa aacagcaaaa aaacgttttg
      541 atacatatca agaagagctg gcaacagcac ttaaaaatga atttaatttt attaaaaaat
      601 agaaggagac atcccttatg ggaactagac ttacaaccct atcaaatggg ctaaaaaaca
      661 ctttaacggc aaccaaaagt ggcttacata aagccggtca atcattaacc caagccggca
      721 gttctttaaa aactggggca aaaaaaatta tcctctatat tccccaaaat taccaatatg
      781 atactgaaca aggtaatggt ttacaggatt tagtcaaagc ggccgaagag ttggggattg
      841 aggtacaaag agaagaacgc aataatattg caacagctca aaccagttta ggcacgattc
      901 aaaccgctat tggcttaact gagcgtggca ttgtgttatc cgctccacaa attgataaat
      961 tgctacagaa aactaaagca ggccaagcat taggttctgc cgaaagcatt gtacaaaatg
     1021 caaataaagc caaaactgta ttatctggca ttcaatctat tttaggctca gtattggctg
     1081 gaatggattt agatgaggcc ttacagaata acagcaacca acatgctctt gctaaagctg
     1141 gcttggagct aacaaattca ttaattgaaa atattgctaa ttcagtaaaa acacttgacg
     1201 aatttggtga gcaaattagt caatttggtt caaaactaca aaatatcaaa ggcttaggga
     1261 ctttaggaga caaactcaaa aatatcggtg gacttgataa agctggcctt ggtttagatg
     1321 ttatctcagg gctattatcg ggcgcaacag ctgcacttgt acttgcagat aaaaatgctt
     1381 caacagctaa aaaagtgggt gcgggttttg aattggcaaa ccaagttgtt ggtaatatta
     1441 ccaaagccgt ttcttcttac attttagccc aacgtgttgc agcaggttta tcttcaactg
     1501 ggcctgtggc tgctttaatt gcttctactg tttctcttgc gattagccca ttagcatttg
     1561 ccggtattgc cgataaattt aatcatgcaa aaagtttaga gagttatgcc gaacgcttta
     1621 aaaaattagg ctatgacgga gataatttat tagcagaata tcagcgggga acagggacta
     1681 ttgatgcatc ggttactgca attaataccg cattggccgc tattgctggt ggtgtgtctg
     1741 ctgctgcagc cggctcggtt attgcttcac cgattgcctt attagtatct gggattaccg
     1801 gtgtaatttc tacgattctg caatattcta aacaagcaat gtttgagcac gttgcaaata
     1861 aaattcataa caaaattgta gaatgggaaa aaaataatca cggtaagaac tactttgaaa
     1921 atggttacga tgcccgttat cttgcgaatt tacaagataa tatgaaattc ttactgaact
     1981 taaacaaaga gttacaggca gaacgtgtca tcgctattac tcagcagcaa tgggataaca
     2041 acattggtga tttagctggt attagccgtt taggtgaaaa agtccttagt ggtaaagcct
     2101 atgtggatgc gtttgaagaa ggcaaacaca ttaaagccga taaattagta cagttggatt
     2161 cggcaaacgg tattattgat gtgagtaatt cgggtaaagc gaaaactcag catatcttat
     2221 tcagaacgcc attattgacg ccgggaacag agcatcgtga acgcgtacaa acaggtaaat
     2281 atgaatatat taccaagctc aatattaacc gtgtagatag ctggaaaatt acagatggtg
     2341 cagcaagttc tacctttgat ttaactaacg ttgttcagcg tattggtatt gaattagaca
     2401 atgctggaaa tgtaactaaa accaaagaaa caaaaattat tgccaaactt ggtgaaggtg
     2461 atgacaacgt atttgttggt tctggtacga cggaaattga tggcggtgaa ggttacgacc
     2521 gagttcacta tagccgtgga aactatggtg ctttaactat tgatgcaacc aaagagaccg
     2581 agcaaggtag ttataccgta aatcgtttcg tagaaaccgg taaagcacta cacgaagtga
     2641 cttcaaccca taccgcatta gtgggcaacc gtgaagaaaa aatagaatat cgtcatagca
     2701 ataaccagca ccatgccggt tattacacca aagatacctt gaaagctgtt gaagaaatta
     2761 tcggtacatc acataacgat atctttaaag gtagtaagtt caatgatgcc tttaacggtg
     2821 gtgatggtgt cgatactatt gacggtaacg acggcaatga ccgcttattt ggtggtaaag
     2881 gcgatgatat tctcgatggt ggaaatggtg atgattttat cgatggcggt aaaggcaacg
     2941 acctattaca cggtggcaag ggcgatgata ttttcgttca ccgtaaaggc gatggtaatg
     3001 atattattac cgattctgac ggcaatgata aattatcatt ctctgattcg aacttaaaag
     3061 atttaacatt tgaaaaagtt aaacataatc ttgtcatcac gaatagcaaa aaagagaaag
     3121 tgaccattca aaactggttc cgagaggctg attttgctaa agaagtgcct aattataaag
     3181 caactaaaga tgagaaaatc gaagaaatca tcggtcaaaa tggcgagcgg atcacctcaa
     3241 agcaagttga tgatcttatc gcaaaaggta acggcaaaat tacccaagat gagctatcaa
     3301 aagttgttga taactatgaa ttgctcaaac atagcaaaaa tgtgacaaac agcttagata
     3361 agttaatctc atctgtaagt gcatttacct cgtctaatga ttcgagaaat gtattagtgg
     3421 ctccaacttc aatgttggat caaagtttat cttctcttca atttgctaga gcagcttaat
     3481 ttttaatgat tggcaactct atattgtttc acacattata gagttgccgt tttattttat
     3541 aaaaggagac aatatggaag ctaaccatca aaggaatgat cttggtttag ttgccctcac
     3601 tatgttggca caataccata atatttcgct taatccggaa gaaataaaac ataaatttga
     3661 tcttgacgga aaagggcttt ctttaactgc ttggctttta gctgcaaaat cgttagcgtt
     3721 gaaagcgaaa cacattaaaa aagagatttc ccgcttacac ttggtgaatt taccggcatt
     3781 agtttggcaa gataacggta aacatttttt attggtaaaa gtggataccg ataataaccg
     3841 ctatttaact tacaatttgg aacaagatgc tccacaaatt ctgtcacaag acgaatttga
     3901 agcctgctat caagggcagt taattttggt cacgtccaga gcttccgtag taggtcaatt
     3961 agcaaagttc gatttcacct ggtttattcc ggcggtgatc aaataccgaa aaatctttct
     4021 agaaaccttg attgtttcga tctttttgca aatttttgcc ctaattacac cgctattctt
     4081 ccaagttgtt atggataaag tactggtgca tcgaggtttt tcaaccttga atatcattac
     4141 ggttgcctta gctattgtga tcatctttga aattgtacta agtggtttga gaacctatgt
     4201 tttttctcat agcactagcc gtattgatgt tgaattaggc gctaaattat ttcgacattt
     4261 attatcacta cccatttctt attttgaaaa cagacgagtt ggagatacag tcgctagggt
     4321 tagagaatta gatcaaattc gtaatttcct taccggacaa gcattaacct cggtgttaga
     4381 tctcttattc tcttttatct tttttgccgt aatgtggtat tacagcccaa aattaacctt
     4441 ggtaattctt ggttcattgc cctgctatat tttatggtca atttttatta gtccgatttt
     4501 aagacggcgt ttagatgaga aatttgcccg aagtgctgat aaccaagcat tcttagttga
     4561 gtcggtaaca gccatcaata tgattaaagc gatggcggtt gctccacaaa tgacggatac
     4621 atgggataaa cagctggcaa gctatgtttc atcaagtttc cgtgtcaccg tattagcaac
     4681 cattgggcaa caaggtgtac aacttattca aaaaaccgtt atggtgatta acctttggtt
     4741 aggggcacac ttagttattt caggcgatct gagtattggg caattaattg cctttaatat
     4801 gctatcaggg caagtgattg caccggtgat tcggctggct cagctctggc aagatttcca
     4861 acaagttggg atttccgtca ctcgcttagg tgatgtttta aactctccaa ccgaacaata
     4921 tcaaggcaaa ttatcactac cagaaataaa aggcgatatc tcatttaaaa atatccgctt
     4981 tagatataaa ccagatgcac caactatttt aaataatgtg aatttagaaa ttaggcaagg
     5041 agaagtgatt gggattgttg gacgttccgg ttcaggcaaa agtactctga ctaaattact
     5101 gcaacgtttt tatattcctg aaaatgggca ggttttgatt gatggacatg atctagcctt
     5161 agctgatcca aactggctac gccgtcaaat aggtgtagtg ctgcaagata atgtgttatt
     5221 aaaccgcagt atccgagaaa atattgcgct atcagatcca ggaatgccaa tggagcgagt
     5281 aatttatgca gcaaaattag caggggctca cgattttatt tcagaattgc gtgaaggtta
     5341 taacaccatt gtgggtgaac aaggagcggg gctttcaggc gggcaacgcc aacggattgc
     5401 gattgctcga gctttggtaa acaacccgaa aatcctgatt tttgatgagg caaccagtgc
     5461 cctcgattac gaatctgagc atattattat gcaaaatatg caaaaaatat gccaaggcag
     5521 aaccgtgatt ttgattgcac atcgtttatc gaccgtcaaa aatgcggatc gaattattgt
     5581 gatggaaaag ggggaaattg ttgagcaagg caagcaccac gaattactgc aaaacagtaa
     5641 cggactttat tcctacttac accaattaca acttaattaa gaaggaaaac aatgaaaata
     5701 tggcttagtg gtatttatga atttttccta cgctataaaa acatttgggc agaagtatgg
     5761 aaaattcgta aagaattaga ccacccaaac agaaaaaaag acgaaagtga atttttaccg
     5821 gcacatttag aactgattga aaccccggtt tctaaaaaac cacgtctaat tgcttatttg
     5881 attatgctat ttttagttgt ggcaattgtg cttgccagtg taagcaaagt tgaaattgtg
     5941 gcgactgctc ccggtaaatt aacttttagt ggcagaagta aagaaattaa accgattgaa
     6001 aacgccattg tacaagaaat tttcgttaaa gatgggcagt ttgtggaaaa agggcaatta
     6061 ttagtcagct taactgcatt gggttctgat gcagatatca aaaagaccat ggcttcactt
     6121 tctttagcta aactggagaa ctatcgctac caaactttgc ttactgccat tgaaaaagag
     6181 tccttgccgg tgattgattt atctagaacc gaatttaaag attcatcgga agaagatcga
     6241 ctacgtatta aacacttaat tgaggagcaa tacaccactt ggcaaaaaca aaaaacacag
     6301 aaaactttag cgtataagcg taaagaggct gaaaaacaaa caatatttgc ctatgtccgt
     6361 aaatatgaag gtgcaacacg tattgaacaa gaaaaattaa aagactttaa ggcactttat
     6421 aaacagaagt ctttatctaa gcacgaactt cttgcgcaag aaaataaatt aattgaggct
     6481 cagaatgagc tagctgttta tcgctcaaaa ttaaatgaat tagaaaatga tctactcaat
     6541 gtaaaagaag aacttgaatt gatcacgcaa ttctttaaaa gcgatgtgtt ggaaaaatta
     6601 aagcaacata ttgaaaatga acgccaactt cggctcgagt tagaaaaaaa taatcaacgc
     6661 agacaggcct cgatgatcag agcaccggtt tccggtacgg ttcagcaact gaaaattcac
     6721 actataggtg gtgttgttac gactgctgaa accttgatga tcattgtgcc ggaagacgat
     6781 gtgttagagg ccaccgctct ggttccaaac aaagatatcg gctttgttgc agcagggcag
     6841 gaggtgatta ttaaagtgga aactttccct tatacacgct atggttatct aactggtcga
     6901 attaaacata ttagcccgga tgcgattgaa caacctaatg taggcttagt ttttaatgca
     6961 actatagcta tagataggaa gaatctaaca tcgcctgatg ggcgaaaaat tgatttgagt
     7021 tcaggtatga caataactgc tgaaatcaaa accggtgaac ggagtgtaat gagttattta
     7081 ctcagcccat tagaagaatc tgtcacagaa agtttaaggg aacgctaatc gaaccaaaac
     7141 aaagccataa aagccatttt gagcttttat ggctttattt tttagtccac aagcggtcaa
     7201 aaaagcccaa ttttttacac ttttataaca aattgttcta actaaaaatt actaattctt
     7261 ttcttttata agacgaatcc tctattttca tttcattaac attgaactag aaaaggggat
     7321 ttatgagcct aagcattacg aatctttctc ttggctaccg caaaaatcag caaaggctta
     7381 tttgaaaagc acggtgtgca ggtggaaaaa ccggtgatgt ttcgcagctg ggctcagttg
     7441 gtggaagcct ttttaagtgg caatgtgaac gtggtgcatc tgctttcgcc tatgagtttg
     7501 tgggcgaaat atggagcaaa tgctccggtg aaagcggtaa tgtggaatca cttggcaggt
     7561 tcggctttaa cggttcgccc tgaaatcaac agtattgccg aactctccgg caaaacggta
     7621 gcaattccgt tttggtattc aattcataat atcgttttgc aacgattatt acgagaaaat
     7681 ggcttgaaaa tcaccgaaaa agagccgaaa agcggtgaag tgcgattaag tgtaatggct
     7741 ccgtcagata tggtggcagc gttggcaagt gaggcaattt ccggctttat tgtggcagag
     7801 ccgttcaatg cgttagcgga agccaaaggt gtggggaagg tgctgcgttt tagtggcgat
     7861 gtgtggaaag atcacgcctg ctgtttaacc ctaatgcacg aatacgatat tcaacaccgc
     7921 ccggaatggg tgcaaaaagt ggtgaatgtc ttaaccgaag cccaagtgtc cacgcttgcc
     7981 aaccgtgcag aaaccgctca attattggct cggggcagcg gctacacgcc gcacgatcaa
     8041 aaagtgctgg aaaaggtact ggctccaacc caagctcagt gggataaata tatcgaaaca
     8101 ggggcaattc aaaaccctca gtggcaccaa cagcgaatcg gtttccaacc gtatccgttc
     8161 gattcctata tggaagagct ggtcaaaatg ctcaaacaga cccacattgc cggcaataat
     8221 gcgtttttac aacagcttga cccggtagag gcagcgaaag cgattaacga gccgaccttt
     8281 gtgcgaaaag cgattgagca aggcggttgg gttgaaacct ttaatttaca aaccggttgg
     8341 acaagaaccg agcaaattag tgtataagcg ataggaacga acgatgaaac agaaatatat
     8401 ttacggctta gccggtttat tactgctact tttaggttgg cagcttggca cagccttgtt
     8461 aagccaacgg ttgccgatgg cgtcaatgtt agctccggca aaaacctggg aaagttttac
     8521 ttggctgatt tcctccggcg aaatttttcc gcacttatgg gcgagtttgc aacgcattgc
     8581 tgtcgggcta ctcgctgcgt tagtgattgg tgtaccgctg ggcttattgc tcggcttctc
     8641 caagcacctt gaaatgcttt gcacgccgtc attccaacta ctacgtatga tttcgccact
     8701 ttcgtggatg ccgattatcg tgatgttact tggtgtaggc gatttgccga tttatttttt
     8761 actggcgttt gccaccgttt ggtcgttgat tatttccacc acctcagggg taaaaagcat
     8821 tgatccacaa tggttacaac tgggtagagt aatgtcggct acccgcaaag aactgctgtg
     8881 caaaattgtt gtaccggcta ttaccggaca cgttctcacc ggtttacgtg tggcggttgg
     8941 gattgcgtgg gtggtgctgg taccgtgcga aatgctaggc gtgaatcaag gactcggcta
     9001 ttttatttta gacacccgag accgattagc ctattccgaa ctgatggcgg taattataat
     9061 tatcggctta atcggctggg cgttggatag cttaatccgc ttggctttag cgaaaggcgg
     9121 cagataaatt gacaagcggt cgaaaaattg catttttttg caaaaaatcg accgcttgtt
     9181 tattcccaaa aagcatatta ccttaattta ttttatttct agggcataaa aaagcgattt
     9241 aagatagcga caaagtaaac taattatacg aggtaaacac aatgtcggtt ctttcatctt
     9301 cttttattca atggcttcag cagaacgccg aaaatttaga tcaatctaac gaacgagcgg
     9361 atttactcat tccacaaatt gccgcactag ggctatataa aatcggcgtg ccggaaacgc
     9421 ttggcggcag cggtggcact ttggttgatg cgatcaaagc cgttaccgaa ctgggtaatc
     9481 actcgctggc tgcggcattt gtttcgtggg gacatcgtac ctttatcgag catattatcg
     9541 cctcaaaaaa tcctattccc cgccaaagct atttggcgga tctgctaaat ggcaatttaa
     9601 ccgcaggaac aggtttatcc aatgcgatga aatttctctc cggcattgaa gagttgaatg
     9661 tgaatattcg tgaagaaaac ggtaaacgct atttaaatgg ccgcctgcct tgggtaacca
     9721 atttacgttc ataccgcttt gttgctagtt tcgttgccgg ttttcaagac gaacgcaaac
     9781 cgctagtgat tgcaattccc tccaccgcca aaggcttaac ccgcaccaaa gaattggaat
     9841 ttatcgcatt gcaaggcacg aatactacct ctctcgtatt tgagaatgtg gaattacaag
     9901 atgaatggat tttggctgat gacgcgcctg agtttttagc agccactcgc cctgcgttct
     9961 taggtttaca atttggtttg ccctttggct tggttgaacg tagtttggcg gaaatcgaaa
    10021 aatcgctccc tttccgtgca attctcgcct ctgagtggca agctcaagtt gatgccctca
    10081 acgatattaa aactcgtctg tttaatggct taaatgaaga aggttatttt gtgcgtaatc
    10141 cgaaagagct tttccaagcg agaattgaca ttgtcaatgt cgtcgcccaa actattctgc
    10201 tagaactgca agcgagtggc ggacgtggct atctgaaaaa tgatacttca ggcttcagcc
    10261 gccgttggaa agaagcggca tttctgcccg ttgttacgcc aagtgcggta cagctgagaa
    10321 tggtgctggc gaatagttaa gcggataaga gacaaattgt tgcctctttt attttgcaaa
    10381 aaatagtcta aatataaccg cttgcaataa aaataaaaaa ggatgcattt tttatgcttc
    10441 ctcaatttta cggctatcta ttatgcaaaa ggctgcaatt cagggttaat tggaatttcg
    10501 gcaatgttgt taacgtagtt acataatgtt gccaagctca cgcctaaaat cacatcaatc
    10561 gcattttgtt ggttgtaacc tgcggcaaaa aattcgttta attgggcttc ggttaatttg
    10621 gctttttgta acattactgc aagggtgaag cgagccagag tgtctaattt gttatcgtct
    10681 atgcgagccg tggcacgtaa agcatttacc acttcttcag gcatttttaa tgcttttaag
    10741 gcgattttag tatgacctgc cacgcagaaa ccacagccgt tgaccactgc tgcggtgatt
    10801 tgtaccactt cacgttcttc agcggttaag ctgttacgac tattaatacc acccacagtg
    10861 cggtaagttt ccagtgctgt tggtgcgttg gctaatacgc cgatcagatt tgggataaaa
    10921 ccgtttgctt gttgcactgc ttttagggct tcttgtgccg tttcaggagc ggattcaata
    10981 gtgtgaattt gaaattgaga cataaatgtt ccttatcagg ttgtttattg gtgtggctca
    11041 tcataaagaa aaggctaatt tagaacaaat caaaatcact atttaatata actaaaagat
    11101 cttaaaggga gtatagttgc ctatactccc tttgtttatg cacaggttgc gtttttactc
    11161 ttctgcgtct tcttttgccc attctaatga gcggcgaacg gcttttttcc aacctttata
    11221 gcgtttcgcc cgtttttctt ggtcgccgtc cggtgtgaag gtgcgttcaa tttccgcttt
    11281 gtctttcagt tcttccaaat ctttccagaa gccgacagca atacccgcaa gataagctgc
    11341 ccctaaagca gtgacttctt tcactttcgg acgctcaact ttggtgtcta aaatatcggc
    11401 ttggaactgc attaagaagt tgtttgcggt tgcaccaccg tccacacgta acgcttgtag
    11461 tttcgctttg gagtcagact gcattgcttc taacacatct cgggtttggt aagcgataga
    11521 ctctagggtc gcacgcacaa tgtggttacg gtttgcccca cgggttaaac cgaaaattga
    11581 gcctcgtgca tacggatccc aatatggagc acctaagccg gtaaaggcag gtacaacata
    11641 aacaccgtta gagtcatctt ctttagtggc aaaatattcg ctgtcaaagc tatcgtgaac
    11701 aattttcagc tcatcacgca gccattgaat agacgcaccg gcaataaata ctgaaccttc
    11761 caacgcatat tccggctcgc cttttgcgtt acacgcaatg gtcgttaata aaccgttttc
    11821 agattgaatc gcagtgttac cggtgtgcat caacataaaa cagcctgtac cataggtatt
    11881 cttcgcttgt ccttctttca cgcataaatg accgtagaga gcggcttgtt ggtcacctgc
    11941 aatacccgcg accggaatac gcacaccgcc ttgaccgccg atattagttt gcccgtaaac
    12001 ttctgatgaa tttttcactt caggtaacat tgagcgtgga atattgagca attccagcat
    12061 tttatcgtcc cattgtttgg tgtgaatgtt aaacaacata gtacgagaag cgttggtgta
    12121 atcggtaacg tgtacccgcc cttgggttaa tttccacacc agccaagtat cgaccgtacc
    12181 gaacagcaat tcgccacgtt ctgctttttc tcttgcccct tctacgttat ctaaaatcca
    12241 cttcacttta gtgccggaga agtacggatc gactaccaag cctgtcgttt tacgaatata
    12301 ttcctcgtgt ccgtctgctt ttaatttatc ggtaatatcc gatgtgcgac gacattgcca
    12361 cacaatcgca ttataaacag gtttaccggt ctctttttcc cacacaatcg tggtttcacg
    12421 ttggtttgtg atcccgattg cggcaatgct atccggctta ataccggctt ttgccaccac
    12481 ttcatttaag gtggaacttt ggcttgacca aatttccatc gggttatgtt ctacccagcc
    12541 tgcttgcgga taaatctggg taaattcacg ctgagccact tcaaccacat tggcattttt
    12601 atctaataaa accgcacgag agctggttgt accttggtcg agagcgatga tatattgttt
    12661 ttccatagat tactcctgag tatttgctgg aagattgtta tgaatgaggt ttttataacc
    12721 ccaagcaccg aataatgcac cgcagattgg ggcgacaatc ggaatgatga aatacggaat
    12781 ttcttttccg cctgttaaag caatttcacc ccaaccggca agataagcaa agagtttcgg
    12841 accaaaatca cgagccgggt tcatcgcaaa gccggttaac gggccggttg ctccaccaat
    12901 taccgcaatc aataaaccga tgagtaatgc ggctaaggct ttattcggca agccgttttt
    12961 atcatcgcca atcgctaaaa tagtggacat caacaccaca gtaatcacaa attcaacgat
    13021 gaaggcggta accaatgtaa tattagggtt tggataggtg gagaacacac cggcaaagcc
    13081 aacagtttcg ccccgagtaa tgccttgagc ggcttcggcg gcagtaaaga gatcgctata
    13141 cataaaataa atcagtgcga cagagcaaaa cgctccggca acttgggcga tgacataggg
    13201 caaaatttta tgcttttcaa agccgtagaa tgcggcaagt gctatagtga ccgcagggtt
    13261 aaggtgagca ccggaaatac cggcagaaat gtagattgcc atggaaacac caagccccca
    13321 aacgatggaa atttcccata aaccgaaatt cgcaccggct acctgagcag cagcaacaca
    13381 accagcacca aagaaaagaa taaaacctgt accgataaat tcgccaatac aggcattacg
    13441 taaggatttg ctcataaagt ttctccttaa gatgaaaatg attggaaagt gatgaaaaaa
    13501 tgtttgaata tgaacatatt tcggagtgat attgccaaag cggcattttt taagcaaata
    13561 ggaagtttca aatttgtgaa atccatcaca ttatttttct aaatcactca tttttaggta
    13621 tgatgtgaga aaacgttaga tgaggaaaaa tgatgtcttc aatacttatg atttcaatcg
    13681 gggcggtact tggagctatg tgccgctggc aattagccgt ttggctaaac ccgatactca
    13741 gccaattcgc ctttggtact ttagcagcaa attggcttgg ttgtttgtta attggtattg
    13801 caatggggtt taatttaggc gagagccagc ggttgctgtt catcagcggt tttttaggca
    13861 gttttaccac cttttccagt ttctctttag aactaacgga aaaactatta gcagaaaaat
    13921 gggggcagtt tgtgacagtg ctgagtttac atttaatcgg tgggcttttg cttactttga
    13981 taggtgtaat gcttgcaaga gccgttacaa gcggtcgttt ttgctgaaaa ttttgcaaat
    14041 aaaaaacctc ccaaacggga ggttttgcga gcgattaaag taggatattg gaaagtaata
    14101 aaccaaatcc gatactgaaa atcatactaa gtaagcccgg taacataaag ctatggttga
    14161 aaatatattt accgatacgg gttgtgccgg tggtgtcgaa gtcaatcgag gcaataatcg
    14221 ggccgtagtt cggaatgaag aagtagccgt ttaccgccac aaataccccg attagcaccg
    14281 gtgcaggaat gccgatagca atcgctacag ggaataaggt tgcaaccgtt gccccttggc
    14341 tgtttaccaa tacggaaagt acgaataatg cgaaagcaaa tgcccaaggt gcggtttcaa
    14401 ctaagcctga aaccattgat ttcacttcgt ccatatgacc ttgcattaag gtatcgccta
    14461 accaagcaat accgaaaatc gcaatcactg cacgcatacc ggcgtggaag acagaacctt
    14521 tggtgatttc attaccgtcc ggtttgcaga agaagataat caacgcacca atacttaaca
    14581 tcacaatttc aatcgtgtga gccatcccca tcggcttacc atcaaacaca gggcgaagag
    14641 ctggaattgc gcccattaat accactaata atgcaccgaa taggaataag cctactgata
    14701 atttcgcagt cggttttaac ggtaattcgg ttggattggt agtaatgtga ttttctttca
    14761 catattcagg gtcttgcaat aagcgttgat aatttgggtc gtcttttaat tctttgccca
    14821 ttttatttac aaacacacaa gctaaaccta agcccaataa ggtcgcagga atagtcacac
    14881 ttaacacgtt acccaatgta acaccttgag gttcaaggaa ggcaaccaca gcaactactg
    14941 ccgcagcaat cgggctggcg acaatcgcaa attgtgaggc gattactgcc attgaaagtg
    15001 gacgctcagg gcggataccg ttgtggcggc ttacctctgc aattacaggt aatacagaat
    15061 aagcaacgtg acctgtaccg gcaagcacgg tgaatgtcca agttacaagc ggtgcgataa
    15121 aggtaatgta tttcgggttt ttacgcaaaa tgcgagtggc aattttgatc atatagtcca
    15181 aaccaccggc tgcttgcatg gctgctgcag ccgacacaac cgccataatc ataaacatta
    15241 catcaatcgg taaaccggca ggttttagcc caaacccaaa tgaaagaatg gctaagccca
    15301 agccaccgaa cacccctaat ccgataccgc ctacacgggc gccaaccaaa atgcatagta
    15361 acactatggc aaattggata ataaacatcg cagacataat tttttgctcc taaataagta
    15421 aatgaaactc tgtgtttgaa aaaatctgca tttttcatca aattaatcgg cacgtactat
    15481 atcaataaat aaaactaatc tctataatct aaatcaataa aatttctaat taattaagga
    15541 ataatatgca attttcaaaa atgcacggct taggcaatga ttttatggtg gttgatggtg
    15601 taacccaaaa cgtttacctt accgaagaga tgatccgtac gctttctgat cgccatcgtg
    15661 gtatcggttt cgaccaactt ttattggttg aaccgcctta cgaccctgaa ttagattttc
    15721 actatcgcat ttttaatgca gacggcagtg aagtgtcgca atgtggcaat ggggcgagat
    15781 gttttgcccg ttttgttacg ctcaaaggct taaccaacaa aaaagacatt cacgttagca
    15841 ccgcaaaagg caaaatggtg ctaagtttgc aagaagacgg caaagtgcgt gtgaatatgg
    15901 gcgaaccgat ttgggaacct tcgcaagtgc cttttacagc aaataaattt gagaaaaact
    15961 atattttacg caccgagcta caaaccgtgt tatgtggcgt ggtttcaatg gggaatccgc
    16021 actgcgtact gcaagttgat gatgtgaaaa ccgccccggt aaatgaactc gggccgttac
    16081 tagaaagcca cgagcgtttt cctgaacggg cgaatatcag ctttatgcaa gtagtgaatc
    16141 gcaatcacgt taaattacgg gtgtatgagc gtggagcagg cgaaacccaa gcctgtggta
    16201 gcggtgcgtg cggcacagtg gcggtcggca ttatgcaagg cttgttagat aacaaagtgc
    16261 aggtggattt acccggtgga acgctgatta ttgaatggca aggagtaggg catcctctgt
    16321 atatgaccgg cgatgccacc cacatttatg atggatttat taaactgtaa gttttcccat
    16381 agggaggcaa gcggtttatt tttaccgttt ttttgcaaaa tagggttggt ttatacaaaa
    16441 gtaccagcgt ggacgctggc actatcagac tgatgtataa cttttgttta aattcaactt
    16501 atagatggtg caagcgtcct cgcttgtacc aaaacaggtt tcactcgagt aacttcttca
    16561 ccaactccaa caccacaggt aattcggtaa caccttctct atccaaaaaa tgcccgcctt
    16621 gatttaaccg aatataatcc gcgtgcaaat gttgggctaa cgcatcactg tattggtgat
    16681 tcacgacctt atcatctaac gcacttacca catagcttgg aaagctcgat acgctcggca
    16741 aaatcgcata atagttggta aaggcagaca gttcgggtaa gttttctacc ggttgataga
    16801 accccgacac aaacaccgcc cctttaatct tggcgtaatt tttggctaaa aaattcaaaa
    16861 tggcaatgca acctaaacta tgcccgacaa aaaccgtttg atcggtcagc tccacatttt
    16921 gtgcaagatg atttaaccaa ccatctaatg acggctttgc cgaatccggc atattcaacc
    16981 gctcacaact gacaccacac ttcgctaatt cttgctccag ccaaggaaac caatgcttat
    17041 cggcattcgc cgtataaccg tgtacgatat aaacctgtgc catttcacac ctcctgattc
    17101 accaaagatt gtaccatagc ttaatcagga aaaaacaagc ggtgattttt ttaaattttt
    17161 ttgcaactca ggtaaaatag cacgcattta cgcaaagagg tcatcaatga acgtttggat
    17221 tttacttgcg atttccatct gcctcgaaat cgctgccacc aatttactca aattaagcaa
    17281 cggcttcacc aaagctatac cgactattgg ctcgctcgcc ttatacggtt tatcctttta
    17341 ctttctctct attattttcc gcaccctacc ggtcggaatc gtgtatgcta tttggtccgg
    17401 cgtagggatt gtccttaccg cccttgttgc ttattttgct ttcggacaga aaattgactt
    17461 ggcaggctta atcggcatca gcctcattat tgccggtgta ttggtgatta atttgttttc
    17521 taaagtgtga tacaagcggt tgattttaca aaaaaatctg caaaatcaac cgcttgtaat
    17581 agttggcaag aattataacc cctttaaccg ccggtaaagc tcagtaaatt tttggcgttt
    17641 ttgttgatat tctgcatagc gggcaggggt tggttggtaa acctgttcca ggggtaacgg
    17701 ctgacagaac gtagcaatat cctgatttgg gtttagcgca atttgagcga gttttgccgc
    17761 ccctaatgcc ggaccgacat caccactggt gcggtattca aaggttttac cgctaatatc
    17821 ggcaagtagt tgtcgccagt acacactttt tgctccaccg ccaattaatg caatattgtc
    17881 agcaactaca ccagtttcgt ggagtacctc aatcccttca gccaaagcga aacttacccc
    17941 ttcaatcacg gcttttgcca tcgttatttg gttgtcatta tggcttaatc cccaaaatac
    18001 gcctttcgca taagggtcat tatgcggtgt acgttcaccc gataaataag gtaagaaaat
    18061 agcatcagat gccgtttggc ttgcttcaac ctgttggaat aaagtcgata catcttttag
    18121 tcccaatgat tttactgccc aatctaccgc agaagcggca cttaatatta ctgacatcag
    18181 atgccaacga tcaggtaaag cgtggcaaaa actatgcact gctttttgcg gattagcctg
    18241 aaatttatcg ctcactacaa aataaacccc tgaagtcccc aatgagagca tagcttgccc
    18301 ggtttggtat aagccaatgc cgattgcacc ggcagcatta tcgccaccgc ctgccacaat
    18361 cggcacagat ttcattttcc attgctcggc aagggttgga cgtaaataac ctgtgatttg
    18421 attgccttca aacagtttcg gcatattttc aatgtctaat ccgcaagcat ttagtagcga
    18481 tttgttccaa ttccgtttac ccacatcaag ccacattgtg ccggaggcat cagacatatc
    18541 agaggcatat tcgccgctca tcaacaagcg gagataatct ttcggtagca agactttgct
    18601 gactttttcg gcaatatcgg gctggtgttt atcaacccaa cgcaatttcg gagcggtaaa
    18661 gcccggcatc atcaggttgc ctgtaatttc acggctattt ggcacaagct gttctaactc
    18721 ttcgcattcc ataaaactac gtccgtcatt ccataaaatc gcaggggaaa gtacattatc
    18781 tgcgttatct agtaaagtcg ctccgtgcat ttgcccggtt aaaccaatcg cttttactgc
    18841 ttgtaaatct tgagtagcgg aaagttctaa catcgcttca ttggtggcat tccaccaatc
    18901 ttgcggattt tgttcagacc acaatgggtg tggacgaaaa ataggaagtg atttttgtgt
    18961 gatggcaata atgtgttgat tttcatcgag taacacgact ttcacacccg atgtgccgag
    19021 atcgattcca atgtacataa atattccttt gttattgaat acaagcggtc attttattcg
    19081 gaacatttgc aattttaagt tttggagatc tatcacccct ctttagcaaa gagggggatc
    19141 agatcgagct taactttgca aaaaattgat aaaaaacaac cgcttgtaga ttaacggtaa
    19201 atatagctat ttaccaaatt ttccaaatat tcttgctgac cggaaacagg ttttggatct
    19261 aacccttggg tttccactat ttttgccaaa tcttcaaggc ttgctttacc gtttagaatt
    19321 tgtaagccca aatcttggtt ccagccagcg tagcggttat ctactacttt ctgtaatgct
    19381 tgatcttcca gcatttttgc cgcacgtttt agcgaaaggg ctaacacatc aattgccccg
    19441 atatgtgcgt ggaataaatc atacggatcg gtactttggc ggcggatttt cgcatcaaag
    19501 ttgaaaccgc ccgttgtgaa accacctgct tttaagattt catacatcac aagggtgttt
    19561 tcttccacgc tgtttgggaa ttggtcggta tcccaaccta attgcggatc acctcggttg
    19621 gcatcaatcg agccaaaaat atctaatgcg gtggcagtcg caatttcgtg ttggaaagta
    19681 tgccctgcaa gagtggcgtg gtttgcttca atgttgactt tgatctcttt ttctagacca
    19741 aactgtttta agaaaccgta aacggtggca acatcgtagt catattgatg tttggttggt
    19801 tcttgtggtt ttggctcaat taataaagtg ccgttaaaac cgattttgtg tttatgttcc
    19861 accactaact gcataaagcg accgatttgt tcacgctcac gttttaagtc agtgttgagt
    19921 agggtttcat aaccttcacg tccgccccat aatacataat tttcgccgcc taagcgtttg
    19981 gttgcgttca ttgcggtaaa gacttgtgct gccgcccaag caaagacttc cggattcgga
    20041 ttggttgaag cacccgacat atagcgagga ttggtaaagc agttcgccgt accccataat
    20101 aatttcacgc ctgtttcagc ttgtttttgc tctaaaatat ccacaatagt gttgaaattg
    20161 tgctgatatt ctttgaaatt gttgccttcc ggtgcaacat ccacatcgtg gaagcagtag
    20221 taaggaatgc ctaatttttg gaaaaattca aaggcaattt ccgctttttg cttcgcacct
    20281 tgcagtaaat cccccgtttt ttgccagctt ctgtcaagcg aacccacgcc aaacatatcg
    20341 ttacccgtcc agcagaaggt gtgccaatag caaaccgcta accgcagatg ttctgccatc
    20401 gttttgccta aaaccacttc atccgggttg taatgtttga atgcaaacgg gttggtggaa
    20461 ttagcccctt catattgtac ttttgagatt ttgtcgaaat agttagacat aataatgctc
    20521 ctatgaattg gaaaaataat ctttcggtaa catcatcgga aaattatgca aaaccttcaa
    20581 ttacgatatt tcgtttttgg atttcgatta ttggttaatg tggcgtagat cacaaaagtg
    20641 aaaaatcata atgatattaa taaatatgat aattgaactt catttgaaat aagcccagac
    20701 tgcttacggg cgaaaaagat gctcacattt tcataaccaa tgaggtgaac tatgaaactt
    20761 aagtctaaat tattagccgt tgctacggcg actttaatgg tactcagcaa tgcttctgtt
    20821 gctaaagatc taaaaatcgg tatgtcaatt gatgatttac gcttagagcg ttggcaaaaa
    20881 gaccgagata tttttgtgaa taaagcggaa agcttaggag caaaagtctt cgttcaatcg
    20941 gcaaatggcg atgcaaccgc acaaatctca caaattgaga atatgttgaa taaagatatt
    21001 gatgtattgg tgattattcc gtttaacggc gaagtgttat ccaatgtgat tgccgaggcg
    21061 aagaaagaag gtgttaaggt acttgcttac gaccgcttaa tcaataatgc cgatgtggat
    21121 ttttatgttt catttgataa tgaaaaagta ggtgaattgc aggctaaaag cattattggg
    21181 caaaagccgg aggggaatta tttcctaatg ggtggttcac ctgtagataa taacgcgaag
    21241 ctgttccgta aaggtcaaat gaaggtgcta caaccgttaa ttgacagtgg aaaaattaaa
    21301 gtggtaggcg atcaatgggt agattcttgg cttgctgaaa aagcattaca gattatggaa
    21361 aatgcactaa ctgctaataa aaataatatt gatgcagttg tagcttcaaa cgatgcaacc
    21421 gcaggcggtg caattcaagc gttaagtgcc caagggttat ccagcaaggt tgcaatttcc
    21481 ggacaagatg cagatttagc cgcaattaaa cgtattattg ccggtacgca aacgatgaca
    21541 gtgtataaac caattaccaa tttagccgac aaagctgccg aaattgctgt tgcattaggt
    21601 aaagatgaga aagtagaaat gaatgctcaa ttaaataacg gtatgaaaga agtaccggca
    21661 tatttattag agccggttgt tgtaactaaa gaaaatattg atgacacagt aattaaagac
    21721 ggcttccata ccaaagatgc agtatataaa taaatcactt taatttttct agatggcgag
    21781 gcttcctcgc catttttgaa aataaggggc taactaagta tggcgaaatt attagaaatg
    21841 aagaacatca ctaaaaaatt cggtgaggtt gtggcattaa ataatatttc aatttccctt
    21901 gaaaccggcg aaatactttc tttatgtggt gaaaatggtt caggcaaatc aactctgatg
    21961 aaagtattat gtggaattta tcctgccggt gattatgaag gggaaatcta tttttccggc
    22021 gaaaaattga ttgccagaaa tatcaaagat actgaagaaa aaggcatttc gattattcac
    22081 caagaattga ccttagtaaa aaatatgtcg attttggaga atatgttttt agggaatgaa
    22141 attaccaaat cagggattac agatgacaat gaaatgtatc tgcgttgtaa aaccttactt
    22201 gaacaagtgc agttggatat tgacccaaac accaaagttg gagagctagg tttagggcaa
    22261 caacagttgg ttgaaattgc caaagcattg aataaacagg tacggttgtt gattttagac
    22321 gagcctaccg cctcgttaac cgaaaaagaa accgagattc tgctgagttt aattaaagat
    22381 ttacaagctc acaatattgc ttgtgtttat atttcacaca aattgaatga agtgaaagcc
    22441 atttccgaca aaatctgtgt cattcgagac ggcgaacata tcggtactcg cagtgcagag
    22501 ggaatgagtg aagacgatat tattacgatg atggttggac gtgagattac ctcgctctac
    22561 ccacacgagc cacacaatat tggtgaagaa gtccttcgag ttgaaaattt aaccgcttgg
    22621 cacccaacca atacacatat caaacgggtt gataatgcta attttgtact acgccaaggt
    22681 gaaattttag gtattgctgg tttggtcggt tcagggcgaa ccgagatggc acaatgtatt
    22741 tttggctctt accaaggcaa atatcaaggt gatatttttc tgcataagca accgattaaa
    22801 atcaaaaatt gtgcacaagc gattgaaaac catattgtga tggtgccgga agatcgcaaa
    22861 aaacacggca tcattccaat tatgggggtg ggtaaaaaca taactctctc ttcattaccg
    22921 caattttgtt ttggcaaaaa agtaataaat gaaccgctgg aagaaaccat tatcaaccaa
    22981 tctattgcaa aactgaaagt gaaaacttcc tcgcctgaat tagcaattgg acggttaagt
    23041 ggcggtaatc agcaaaaagc aattttggca aaatgcctat tgcttaaccc taaaatcctg
    23101 attttagatg agccgacccg tggtatcgac gtgggagcaa aatatgaaat ttataagctc
    23161 atcaaccaat tagctaaaga aggtatggca attatcgtca tttcctccga attacctgaa
    23221 gttttaggca ttagtgatcg tgtattggtt atgcaccaag gcaaaattaa agcagatttg
    23281 attaaccaag accttaccca agaaaaagta atggaagcgg cactcaagga gtaacctatg
    23341 aataagttaa aatcgattaa tttacaagtt tatattatgc tgattgcaat tgttgtgatt
    23401 atgagctttt tctctattgc aactgacggt gcttatttaa gtgccagaaa tatctccaac
    23461 ctgttacgcc aaacctccat taccggtatt cttgccatcg gtatggtatt tgtgattatt
    23521 tccgcagaaa ttgatttatc ggttggctcg ctaatgggct tactcggtgg atttgccgcc
    23581 atcagtaatg tatggtgggg ctggccgctc tcgttaacta ttatagttac tttaatttta
    23641 ggcgtcatgc tgggtgcttg gagcggttgg tgggttgctt atcaaaaagt gccgtccttt
    23701 attgtaactc ttgccggtat gctggcgttt cgtggtgtat tggtcggctt aaccaacggg
    23761 acaaccgttt caccgattag caatgaaatg acaaccattg gtcaaggcta tttgcctgat
    23821 atggtgggta tgattttagg tactatcggg atattttgct ttattgtttg gggtagctac
    23881 caacgcaaag ccagacaaaa actcaatctt actgtgcctt ctatgtcgaa agacacgctg
    23941 aaatacggac tagttgcaat tatcgtatta ggtgcgatct acctactcaa tgattaccgt
    24001 ggtgtgccat tcccggtatt ggtgttggtg attctagcca ttgccggcac attcttggcc
    24061 agaaaaaccg ccttcgggcg tcacatttat gcgattggtg gcaacattga tgccgctcgc
    24121 ctctcgggga tttcagttga aaaagtcaaa cttgcgattt ttgccttaaa cggcttatta
    24181 gttgccattg caggcttgat tttaagctca cgtcttggag ccggcgcacc ttccgccggg
    24241 caaaatgccg aattagatgc gattgccgcc tgcgtgattg gtggagccag tttagccggc
    24301 ggtatcggta gcatttatgg cgtagttatt ggagcattta ttattgcttt gctggataac
    24361 ggtatgagta tgcttgatgt gccaaccttc tggcaatata tcgttaaagg tggaattcta
    24421 ctgcttgcag tttgggtaga taccatcagc aagaaaaaag cctaattgga taacaagcgg
    24481 tcaatctcga ctatccaacg ggaaatccgg cataatcggg ctaaaaatgg gaactattgt
    24541 gcgttttgcc gtctttttag catttgctac ggcaaccagc tccaccaagt gcggtggcat
    24601 ttcgccttgt ttggcaaggt tgcaaaggta ggttatcgct ttaatccggc tcattgagcc
    24661 ttccagttcc aacacatacg ccaccagtgc cattcgtgca tcagcaattt ctcgctgttt
    24721 ggtggtcagg tttcccacat ccacctccgc acgcactgcc ggtaactttt tcggcttggc
    24781 ttccaccacc gccgacataa agcgggagcg gatttcggtt tggatttctt gagggaggtt
    24841 tgagagtgca aattctaaaa tttctccccc aactccaacc tttttatgag tagtccatcc
    24901 ttgtttcttt gcctgataca aaactccttg ctttgtttta ggtaaacagg ctaaacttaa
    24961 ctcagccaat tcttttgccg aatagtgtgt ttttagactg ttttcactca taaaaacctc
    25021 tttaagctat ctgtcggcaa attttttatg gtttcgttga gcataacgtt caggccaaat
    25081 ttcttcgggt gatataccga ttgcttcggc aataatacgc tcacccttta accacggacg
    25141 atctacagcg tttttcaagg tgctggattg actgtagcca tgcttcaatg agagttgtct
    25201 aagcgaccaa cccgctttat gtaaagcagc gatgatgtcg gccctatgcc agtctttcgc
    25261 tgttttttta atatcttcca atgtactcat tagataactc ctttcgctta acgatttaga
    25321 taatatacct atttttacta aaaataaagt gtaaaaaggt tgctttatag ttgatttatg
    25381 agcaaataaa cttagtttgc tgtaagttat tgatttattt ataggttttt agagtgtaaa
    25441 aggctaaaaa tctcaactta tttttttaca gttatgaaaa tagagtgtaa aaaggttatt
    25501 ggtttcggta accgaataga acagagcaga aaaaatgcaa aattaagtag atctgaggtt
    25561 tgtgatgccc taggaggtat tgcaatatct acattacaag cgtgggaggc tgatacaaga
    25621 gaacctccta tatcaaaact tatggctttg tcacaaatac ttaacgttga gccttgctac
    25681 ctattaacag gtgagcgaca ctcgcaaagc cttaatgtca caagagagcc acagcctgtg
    25741 tatgccacaa aaccgcagac agaagaaggg gaagtagttg ttatcaaagc taagttacaa
    25801 gaggcaatag aaacgttgga agaggtgctg gaaattaccc aacgggaaat gaagcctgcc
    25861 ggaaaagccc aaatggtgtg ggctttctac gagcttctca cgcaagaaaa aagcgaaaaa
    25921 gaaaaaatgg tgggattact caaactggtg gcataacagg ggacaatatg gacaaacaag
    25981 ccattctcaa attattcaga gacaatagca ctgccggcaa cagccagcca agccaagagc
    26041 ctatacaggt gtttaataac agcaacgtca tcattcaaaa cggcgataac gccacggtga
    26101 ttgccggctg cacggtggat aataacacca acctaacctg tgccgataaa caacgtgtac
    26161 acgacctcat tcacagctta gagcaacgca accgagccag ccgagatgag ggcgcttaaa
    26221 attgttttaa aatccgttta aacctgctca gacctatgca aaaaataacg taaaaatagc
    26281 ccattttttt ctatttttgc tcattttcgt tttttgcata actcacccca aacaaaaacg
    26341 gcgaagcctt gtatttccta gcctcgccgt tatttttccg cccaaatttt tttctttctc
    26401 tctatgcaaa aaagatcagt accccacact atgttgccag acatactcaa caattttacc
    26461 gtcaacgtca gattaccaaa aatgaccgct tgtaatttag aggagtgttt agagcggaaa
    26521 taacatcgga atcacaaaca ccgacaccag catcaccagt acagtaaacg gcacaccaac
    26581 tttaacgaaa tcaataaatt tatagcctgc cggtgctaat accatcgtat ttaccggtga
    26641 agaaaccggc gtcataaaag cggcggaggc tgaaacagcg accgtcatca caaaaggtgc
    26701 cggtgagtag ccaagttggt tagcaatcgc aatggctatc ggcataacca aaattgcagt
    26761 cgctgtgttg gaaataaaag cactgataat cgctgttact acaaataata ctattagaac
    26821 aaaatgtaca tctaagcctt gcattgcatc aagtagaagc ctaacggtta aatccacacc
    26881 accggttttt tgtaaggcaa tagaaaacgg catcatcccc acaatcaaca caatgcttgg
    26941 catatgaatc gaatcataag cacttttcat atccacacag cggaacttgc ctaacattaa
    27001 gcaggcaatc aacgctgcca tcacgtttgg cacaatgccg gtaatcatca gcaacaccat
    27061 agtcagcact gagaacagag cgtgaggggc ttggcttaac gccggagggg cgtttttact
    27121 ttctgccgga tctctaagca agaagaaatc tcgatgatcg tcgtccatac ggtgaatttg
    27181 ttgccatacg cccatcacca ataaaatatc gccgaatttg agtggcgtat cgagcagttc
    27241 ctcttgtatg atttcatcac cacgttttaa gccgacaatg cttaaatggt atcttgagcg
    27301 gaatttgagt tcccgaatag ttttaccgat acattctgct tcaggcataa ccgaaatttc
    27361 cgccataccc accgagcgat attgtgagga aaagtattcg ccttttagct caatcgggcg
    27421 aagtttgagc tgttcacagc gttgttggta agtttcatca tcgagggcag tatcaagcag
    27481 taaaatatct ttcggctgga aaatttcgtt taccgaggca ctgacggtaa tttttctaaa
    27541 ccgcttagtg cgttgaattg caatgatgtt tagcccttgc tcaatccgta aattcagttg
    27601 cccgatagat ttgccgacac agtctgaatc tgcttccacc agcaccattt tggctcgctc
    27661 tttaagttga tactcttcaa ttaactgcga cattgaaaat ttttgagcct gactgtgagt
    27721 attgctttgc tcaccattat ccaaccaacg gcgggcaatc agcatatagc cgatgcccat
    27781 cactaaaata attaatccaa tcggagtaaa actgaagaaa ttgaagcctt caaaacctga
    27841 ttttactaat tcggaatgag caacaaggtt gggtggtgtg gcaattaagg tcatcatacc
    27901 gctgataagt ccggcaacac ttaacggcat cattaaccgg cgaggagaaa ttcccattcc
    27961 cgagcaaatg gcaagcacca ccggaatgaa aatcgccaca atgccggtgg aactcataaa
    28021 agatccaagc ccggcaatac agagcattag cagcaccagc actttggttt cgctcgctcc
    28081 cgacacccgc atcaaccaat cgctgacttg gttcgccacg ccggttcgca ccaaaccttc
    28141 tccgacaata aagagcaacg caatcagcac cacgtttggg tcacttaagc ctgccaacac
    28201 ttctttgact gataaaatat tagtcaggct aaaaaacagc attacaatta aggcaaccac
    28261 gtccatacgc aacttgtttt ggataaattg ccaaatcgca aataccaata acgccattac
    28321 ccaaaacagt tcttgcttaa gaaaatccgg cacaaaagag agcaacgatt gcataaccat
    28381 atcctccaaa atagttaggg atagattaca ccgctttaag caaagaaaaa agccgataag
    28441 atcaaaaaga aaggaaaaag caatcacgta cggcgtgaat gctcagtaca agcggttagt
    28501 tttgacgaaa tttttacaat gggctttcca cattcagttg ttcgtcaatt tcagttaccg
    28561 ccaaaatcag gcttgaacgt accatttttt ccaaccgcat ttgctgcatt tgaaagagca
    28621 tcgaatcttt attcgctgca ctcgctttca tattcagcaa ttcattgata ggcaaaaaat
    28681 caatatggtg caaatctttg gcaaatttca ctaccgccgg gtgagaaaat gcgaactcgt
    28741 cttcttcctc attcaaatgc tgtttgactt caaggaaaag cgagatatct tcaaacactt
    28801 taggtgagat cacccccaac ccaagcaaca cttttaaacg tacttcaatg tcagccagcg
    28861 gtccttgatg ttcaaacaag gaatccacca cggattttaa cgcaaagtcc gttttgcgaa
    28921 acactcgttc aatcaactgt tcaaccgctt tggcaaagcg ttgattggca atgctaagga
    28981 aaccacgcag ggtggtttcc tcactgagtt tgtcgatgta atccatcata gtgtcaagaa
    29041 ttattgatat aattccacca cttgagcaat gaccgcttgg tcggttaaac cggtgtattt
    29101 ttccaccgct gccgccacac cgtgatttgc aataaattcg gcaagttcga ccgcttgtgg
    29161 gtcttcctca ttgcgatatt gcaatgccat caccacgcct ttgaccaagt tttgatacgg
    29221 taagccatat tccaacgtgc cacgcaacgg tttgatcaag cggtcgtttt cgctcagttt
    29281 gcggattggc tcacgcccta cacggtttac gtcatcgttt aagtacgggt tggcaaaacg
    29341 tttgaggatt ttttcgatat acgctgaatg ggcttgtggg tcgaagccgt aacgtttaat
    29401 cagcacagca ccgctctctt ccattgtggc tttcacctga gttttgattt cctcaatcgc
    29461 aatcgcctct ttaatccatt tcacgcccgc ttgtttgccc aagtaggcac agattaaatg
    29521 cccggtgttc agggtgaaca gtttgcgttc cacaaacgcc atcaggttat cggttaattc
    29581 cattcctttg atgtttggaa tgtcaccttt gaactgggtt tgatccacaa tccactcgct
    29641 gaactcttcc accgtgactt ccaacggatc agcagggttc ggctcggcag gtggtacaat
    29701 tctgtccacc gcactatcaa caaaaccaac cactttttca atttctgctt gctgctcggc
    29761 agttaaatgc tcaaaaattt tacctttaaa gaaagttgtg ccacgcacca tattttcaca
    29821 ggcgataatg ttcagcggtt gggtgttgcc actttccaca cgagccacta acgctttggc
    29881 gaacagtggg gcaataaagc caagcacatt cgggccgact gcggtggtaa ttaaatcggt
    29941 gtttttcact tgctcaatca cggcattttc gtctttcgag ttaattgccg caatgttttt
    30001 gacaatttcc acacggctgt catcgcccac gattttcacg ccgtattgct tgttttggtt
    30061 gatttggtcg atttgagttt ggttaatatc ggcaaaagtc acgaaaatgc gagcatcagc
    30121 aagcaacttg ccgataaagc cacgcccgat attaccggca ccaaaatgga gtgcgttcat
    30181 tgatgattgt tcctctataa aacgtagggg cgggtcctgt gcccgcccta aattttgtag
    30241 gataatgggc gggcacagga cccgccccta cacaacaggg tgattattta gataataatg
    30301 ctaacacttt ttccacgtca tttgttgagg tcagtgtttt cattgcttgt tcatcgtcca
    30361 gtgcgttggt aattgcactt aaaatttgga tatggtcgtt gccttttgct gcaataccga
    30421 ccaccagttt cgccacgccg tcttcttcat cggtgaagcg aacgccgttc gggtattggc
    30481 agaccacgat accggttttc agtacgctgt ctttggcatc agatgtaccg tgtggcacag
    30541 ctaagccttc gcctaagtaa gttgaaacca tttgctcacg ggcgaacatt gcatctacat
    30601 agcttggttg aacaaagccc gctttaacta actgctcacc ggcaaagcgg atcgcttctt
    30661 ctttactgtt agcttgtaag cctaaaaaga cttgggctgc ttgcaatttt aacccttcgg
    30721 cttgaggttc ttccaccggg tttgcaaaat tttgtgtatt ttgcaccgct tgttgtggct
    30781 ggtggttagc cagttttgcc actaagctgt catagaacgc actgtctaag aagttagtga
    30841 gcgataagtg ttgagccgtt gccacacgtt gtgttgcacg agcggttaag tctttgtggg
    30901 taatcaccag ttgtgcgtct tgcggtaagt cgttgatcgc taagttttgt acttcaatgt
    30961 ttaaacctgc cgcttgcact tttttgcgta acatactcgc acccatcgca cttgaaccca
    31021 taccggcatc acacgctaca tagattttgt tgatgttacc atttactacg cctttgcttt
    31081 ctgctttcat cgcttgagtt tgtgcttgtg catcttccaa tgaggcttca cctttttggg
    31141 ttttgagtaa gattgacgca atcgcaaaag tcacggcaca agaaagaatc acggaggcaa
    31201 caactgcaaa gtgagcaccc ggtgcggtca ttgctaaaat cgcaaaaata gaacccgggg
    31261 aagccggtgc gattaaaccg ccacctaata atgagttggt taaaacgccg gttgcaccgc
    31321 ctgcaatcac tgcaagaatt aagcgtgggc tcattaacac atacgggaaa taaatttcgt
    31381 gaataccgcc taagaagtga atgattgacg cactaccagc ggtttgtttt gctgtgccac
    31441 gaccaaagaa catataggca agcaagatac caaagcccgg acccgggttc gcttcaatca
    31501 agaacagaat agatttgccc acttcttgtg cttgtgctgt acccaatggc gtgaacacac
    31561 cgtgattgat cgcattgttt aagaatagga ttttcgccgg ttcaacgatg atagaggtta
    31621 ctggcagaag accagcttca accaacgccc ccacacctgc acctaatgcc gcagagattt
    31681 gggtgacgat acctccaatg aaagcaaatg aaagcattgc caaaatcata ccgatgatcc
    31741 cgaccgagaa gttgtttacc aacatctcaa aaccgctttt tactttgccg tcaatcgctt
    31801 tatcgaaggt tttgatcgcc cagccgccta atggacctac aatcatcgca cctaagaaca
    31861 tcgggatttc agaacccacg ataataccca ttgtagtaat cgcacctaca accgcaccac
    31921 gctcaccacc gactaattta ccaccgctgt aaccgattaa cagtggcagc aagtaagtaa
    31981 tcatcggacc gaccagttta gcaaaagtct cgttcggcaa ccaaccggtt ggaataaaca
    32041 gggcggtgat aaagccccac gcaataaagg caccgatatt cggcatcacc atattcgata
    32101 agaaacgccc aaaaccttgg actttcactt ttaaattaga catagaaacc tcaaaaaagg
    32161 agagaaaatt agggttgaaa aaatcgtgct taaattagca ccactttcaa aagttacaaa
    32221 aatgtttctc tcagaaatgt gaagtagatc acattaaatt tttttgggca gatttgaaaa
    32281 tgtgatctat ctcacatttt tggagtaaag atggcgtaag cgtcctcgct tgtgccaagc
    32341 ataattctat ttttgcgatc tacatcgaaa aaataaaatg aattgctaac cctaactgtt
    32401 cacctatatt actatcagca taaactgcac tttagaggtt cataatgagt agaaaatata
    32461 agttttatga gaagagcgga gcctattttg ttagttttgc aacagtttat tggattgatc
    32521 tatttattcg agaagattat tttcaaacca ttatccaatc attgaattat tgtcgaaaac
    32581 aaaaagggat gattttatat ggctactgca ttatgccaag ccatattcat ttattatttc
    32641 aagcaaaaga ccaaaacccg tcagatttaa taagagattt taaaacattt acatctaaat
    32701 gttgattcag caaattaaaa caaatcccca agaaagtaga aaagaatggt tattatggat
    32761 gtttactcgg gcagctaaac aacgaaataa tgtcaagcaa taccaacttt ggcaacatca
    32821 taaccaaccg ataacaatct attctcagaa attttttgat gaaaagctaa accatattca
    32881 caacaaccct atcgtaagcg gttttgtatg cgaggcattt gaatggaaat atagcagtgc
    32941 aagaaattat gctaacaact tacctgtttt attagatatt gatatatgtc agtgaacggc
    33001 acaagcgtaa acgcttgcgc catcgttaca tctataaatt aactagagaa ctccatcaat
    33061 cccgttactt taccctcatc attcactgca attaatgagt gaattttcag ctctttcatt
    33121 aaatcttcgg ctttggctaa aaattcggta tcgttaatgg tttttggatt acgggtcata
    33181 atttcgtcag cggttttatt taggctctcc gccccgaatt tcgctaatgt gcggcggata
    33241 tcaccatcgg taataatgcc ttccaattta tcgtcttgca taattaccgc cacccccata
    33301 cgcccttcgt tcatcacaga taaacattcg gtaaaggtgg tgtctaagct ggcggttggc
    33361 actttacgca ccatcacatc tcgcactctg ttcaataatt tacgaccaag actgccaccc
    33421 gggtggtagc gggcaaaatc ttcagggcgg aaatcacggg ctttcattag cgcaatggct
    33481 aacgcatcgc ctaaagccat cgttaccaaa gtagagctgg ttggagctag attattcagg
    33541 caggcttcac gctctacacc aatatttaaa atcacatcgg catttcgccc aagtgtggag
    33601 taaggattac ctgtcatcgc aataatttta ttgccgaaat ttttcaggct tggaatcagt
    33661 ttattcacat catcagtttc accactgtta gaaatcagaa ttaccatatc aatcggtttc
    33721 agcattccca aatcgccgtg aaaagcctct gtcgggtgca agaaaaagct cggtgtaccg
    33781 gtggaggcaa aagttgccac catttttttg ccaaccagcc ccgattttcc aataccgcca
    33841 acaaccactc gcccttgaca agcgagtatc atatttacca cctcattaaa ttcttcagaa
    33901 agtcgatggt ttagcgtgat aatctgctga gcatagaggt ttaacgtttc ttttgcactg
    33961 tctaaatgat tcatttttac gcccttatac aactaacagc tcaatccctt tcgctttaat
    34021 ctgttctctc atttcttgag ataatccttc atcggtaatg atagtatgaa ttttttctaa
    34081 cccacacaca atattcggac ttttacgtcc aaacttactg gagtcggcaa gtaagacgat
    34141 tttatttgcc gcatcacaca ttagcgaact gactttatat acttcattga aagtcgttaa
    34201 tccaacgtct aaatctagtc cgtctgtgcc aataaagagt atgtcaaaat ttgaaccaat
    34261 aaaagcggat tcagcaaaat aaccgtgaaa tgaagctgat ttctcacgaa atgtaccacc
    34321 ggaaatcagt aagttatagg atttattgag tttcaaaatc tcattgaaaa tagttaaact
    34381 atttgtcatt aaagagaggt tatcaaatgc ttttaaatgg ggaatcattt gtaacactgt
    34441 gctgcctgca tcaaaaataa tagagtttcc ctcattaatt aactctgcag ctttttgccc
    34501 gatagcttgc ttttgttgaa gattaatgcc ggttttctgt gcaagcggtt tatcgtcttt
    34561 gtcctcttta ttgattttct cttcccgttc aagaatttct tcatcaatta agactacact
    34621 gccataagta cgcaagactt tcttatcttc ttcaagtgaa gttaaatctt tacgaatggt
    34681 tgcaccagtt agcttaaaat agtctgccag cacgtccact tcggttctac cgtgctgagc
    34741 taaataggct aaaatttgct gtcttctttc aaaaggtttc attgttcctc caatttagca
    34801 aagattggag cgagctaatc tgtgctaatg ctgttttaat ttttcaatga catctagtag
    34861 cgatgccatt cttttatcgg caattgaaaa tttttcattt tgataatcgg tattcaccaa
    34921 aaatgtagtt aaattagcgg ctttggcggc aattaagccg gttacactgt cctcaataac
    34981 aatacactct tgtttttcaa tgcctaattt tttcactgca ctcaaataga ccgcagggtg
    35041 tggcttgcca tattcttcgt ccattgcact gcatcgaatc gggaaataat cccacagttt
    35101 taagcgatca aacaccgctt taatcaccac cggcggcgat gaggttgcaa cggctaactt
    35161 gatctgatta gattttaaga aatccaataa ttcatataaa cccgttaatg ctttgccgtg
    35221 ttgttcaatc gcagcacaac cgtgtgccaa aatggcttca cttaatgctt ggttggaaac
    35281 agataactga aattttttaa tccaagtgtc gctcaactca tcaatccgct tacctctggt
    35341 gagttgttcg caatcttgct cggtgatatt aatacctaag tcggctaata ctgcaatttg
    35401 agcctctgcc cattggggtt ctgaatcaat cattaccccg tccatatcaa agatgacact
    35461 attgatctgc atatttattc tccattatct catttttaac taaaaaaata ttcaaaatga
    35521 aataaaaaat cgcattattt ttgatctgag caactatatc cggaagatat cgccactttt
    35581 aaggcaaatt gtgaacgttt atcgcttgga aagatttttt ccggcacaat ttgatcaaga
    35641 gacaaaccaa tcacagacgc taatttctgc ggtctggcaa agacggaaaa tcctttcata
    35701 caaaggctat ctaccacttt tttctcatca tcaaacgcca acacaataac cgatttagga
    35761 ttaaaacgac cactattacg cccaaccgtt actttgcctt tcttactgat ttccataaag
    35821 gcttggttaa aggctttaat ttgaagccaa cccaaaacgg cttgtaacag ccacattatc
    35881 attgccaata taatcagaag tgtaattgaa tccatcattg ctccttaata aaaagccaca
    35941 gagcctaaac gtacctgcga tttcaaaaca atacgctttc ccctgtggca tattaaccgg
    36001 tgtggcgaat taacaagcgg tttattttag tcattttttg caaattgttg taaaaaaatc
    36061 gacaaatttg accgcttgtt tgcttagaac attacctgac caccggtaat attaatagac
    36121 tgtcctgtgc aataagctgc ctcttcgccg gcatagaatt ttaagacatt caacacatct
    36181 tgataatcac agccacgttt taaaggcact ttatcaatat aaacttgctc tacttcgctt
    36241 tccggaatgc cgagttttgc cgcatattgc ggaattaacg attggaacat cggcgatttc
    36301 aataaattgc ctaacattaa tgaatgcacg gtaatgcctt tatctgccaa gtctaatgct
    36361 aacgattgtg ttaaaccaac accaccaaat ttcgctgcac tataaccgga attatactta
    36421 ctccctactt tacccgattt agaattaatt tgaatgatac gccctttaat accgtcacga
    36481 atcattaagc gggagaagtg ttttgcggtt aagaaataac cggttaaatt cacttttacc
    36541 gacaaatcaa aatcgtttaa gttgaaatcc caaataggcg atgctttcgc tgtgcctgca
    36601 ctgtaaacca atacatcggc acgcccgaat acggtatctg ttgctttagc tagtgcttca
    36661 acgcttggtt catcagccgc atcgacttgc accccaatcg catttccttc gccttgtttg
    36721 gcattaatgt cggctgccac tttttgtgca ttttcgccgt ttaagtcagc aaccaccaca
    36781 cgataaccgg catctgccaa gccttcagat aaaaaagctc caagtgtttg accgccgcca
    36841 acaacgatag caactttttt ttcattgttc ataatgtatt cctctaaatt ttcaatttga
    36901 aattattttt aatccgtcat taatcacgct tgataatcaa ggttgagttc tctgttaagc
    36961 cttgcggcgg tgttccgata acgtgaacgc ttcccggaaa ttccgcatca tttgccccgt
    37021 caaaacggaa ggtaatgtgt ccgagggcgg ataagttttc agatgcaacg ctaccaactg
    37081 ccgtaatcgg ataagctacg ccatcaaatt cagcgatatc gcctacttct aaagggctac
    37141 ttaattcaga tggattatga atgaagcagt aatcttgtaa atctgccggt gcgccttgtt
    37201 taaaagtgat taacatatcg tctgttaatg attcctgagc aaaattcccg attttggtaa
    37261 aggtcgtttg ataaataatc gtcatataaa tgttctctcg ttttgacaag cggtgcattt
    37321 tgcaaaaaat ttttcaaatt ccaccgcttg tatcgtggtt aattattggt agatgaatgc
    37381 ggaaactgcc cacgcaatca gcacggtcgg tgcaccggtt aaaaaacggc tgactaatac
    37441 tgacggtaca cccacccgta cggtatcttg ttttgcttcc gccattgaaa gacccacagg
    37501 aataaaatca caagcggctt gagcattaat agcaaagagt gccggcagtg ctaaatgtgg
    37561 cggaatattg cctaaaccga tttgcgtacc gactaacacg ccgataactt gtgcaatcac
    37621 ggctcccggc cctaagaatg gggaaaggag agggaaggaa caaatcaacg ccagtgtaac
    37681 taaaccgatt gggctgtttg ccagaggggt caagccgtgg gcaatcacat cacctaaacc
    37741 tgacgcaatg atgatcccga ttaacgcaga aacaaatgcc ataaacggta aaatggtttt
    37801 aagcaccgta tcaatagtgt ctcgtccggc ttggaagaat aacgccgcca ccgatcccat
    37861 tcccataccg atttttgcta ataaaccatc actttgttcg gtgatttttt tgctggagtc
    37921 atactctttt gccgttgctg tcgttgatga agttggtttt gcttgctctg ttgccacagg
    37981 cacacttcca tcggcatcaa ttaagcgaat attgttttct ttcaccgctg aaacataaat
    38041 atcttccaca ataaattctg ctaaagggcc ggatttaccg gtggagtgaa tgttaatggt
    38101 tggaatacgg cgttttgggt aaagcccaca gcgtaatacc ccaccgcaat caataatcgc
    38161 aatcccgatt tcttctgccg gcggttcgcc ttctttaaaa ccatcaaccg cttcccagcc
    38221 ggttaattcc accaatttat taacaatcgc agggcgagtg ccgccggtca tataaagcac
    38281 ttttttgcct tccacaacag gtaatgttaa tggaccaccc caaccaccgt tgcctttttc
    38341 aatgtaaatc gctttgttgc tcataatcta ttcctctgta tttcagttac ttggttagtg
    38401 ggataaatgt acttctctat ctaaggtgat ccccattcgt ttttcaaaga atgcggtggt
    38461 gaagtctgtt atccagccac ggaagaaatt ggtaaacata ccgactaata aataactgat
    38521 ggctaaaggc ccaagtggta agcctaaggt ggttaaaccg ctggcaatac ctaaataaac
    38581 gaataattca cccgggttga tgtgagggaa taagccgttc atagagtggc aactataaga
    38641 ggctgcggcg tagtagcttg gtttgtaacg ctccggtaag aaacgcccta agcttaatgt
    38701 catcgggtta cagaaaacga aagtgccgat caccggtaag atcaaataac gtgaaatagg
    38761 gtttccggca ctacgttgag caagtcgttc aatccgatct tgccctacaa atttaatcag
    38821 ggcattcatt acaaccaata atgaaattaa gagtggcaaa ataccgttta tcataccgac
    38881 taaggtttca ccgccttttt ggaacaggcc gataaaccat tctgctccgt gtgtaattgc
    38941 ttcaatcata ccgatctccg tttttcaaaa taaaatattt ttctttcatc tctgttatga
    39001 gatgtgcaaa tagtaaatta tttttatttt aaaaactgtg acagcgatca caaaatgaga
    39061 aacaactttc aaaataaatt attttttcat tttaaatcaa aacaaaagtg aagtttgaat
    39121 attagatggg ggaaaaaagg aaggctaaat taaaaaagct caaacaataa tgtttgagct
    39181 ttggttttat tcaatgactt ttgcagtata tttgaggttt ccgaccgctt gtatcagggc
    39241 ttggttatcc acactttctt ttaccaccac agtcgctttt cgctctttca ttgaggcttt
    39301 ggtggaaatc acaccttcta ctgctcgtag ttctttattg actaaataaa cgcagagctg
    39361 gcagtacatt tccggaatat ggaggacgac ggttttctct gcttgtttcg tttcaatttg
    39421 agctgttttt tcttgtgcgt agcttgaatg aaccaaacca aaagccaaca gcatcgttgc
    39481 gatatatttt ttcattttat tctccgctcc acatttccaa aatgtaaggc aatacataag
    39541 ggtaagttaa aaagaacatc accaccacag aaactaccca atacaaaatg accagggttc
    39601 tgcgggagaa gtatttggtg cagatgattt tgttggaaaa attcagcaac cagaagccat
    39661 agccaaacgc agcgagcgaa atcagcaaca tcggcagttg tagaaactcc agttggttta
    39721 gctccatcaa ccaaggggaa gagatgccaa acactaaata aaccagtggc ccaatacaac
    39781 agaatgtgga ggtcaccgcc gacactatgg cggtcacgca cattgtgata aatttatggt
    39841 tataactctt tagagatgaa ttcatagcca aattctttcg cctcaaacga gtttaacggg
    39901 tcaccaccta cctcagcata agggtagcca aagttattca gtggtgtaag ttccggttgt
    39961 ggatataaat cgaaatcacg tccgtgattg aagcctaccc agttcatttc ccagttgccg
    40021 aataagtatt tcgagaccgc ttgaacatca gcatcatcca cgtctttttt ctcggctaaa
    40081 cgcattttag cgacatcggc agaatctaca ggcacccagc cgaagcctgc taaatagaac
    40141 tctgcacggc agtgctgccc gccgctttca ttcgccacgc catcttttga gctaccaaat
    40201 gcggttttgg aatattgccc catttttacc gcttgcccta aacgaatacc aaacacttca
    40261 cgagcaggaa tgttagaggc acgagcaagt gctacaaaca ccgagttgat gtcggtacat
    40321 ttacctttta gcactttggt ggtgagaatt ttctccacat cgccatcgcc acagcctagc
    40381 accgagttat cacgttccat attatcaaca atccacttgt ggataagttc cgcttttttc
    40441 aacggatttt gctcgttacc cacaatttta tcggcatatt ctttcacaat accgtctgtt
    40501 ttaatgtgag ccgttggttt taaatactcc aatacatcaa cagaataagt gattttctcc
    40561 ggcatttggt aatttgccaa cgccccttga gccataggct cacgatcttg ggtttggatc
    40621 accattttca cttttagatc acgctttggt gcatcagtat cccaagtggc aaacaaggtt
    40681 tttgcaccat aagcgttatt ttctgtgata taggcgtttt tgtaacttcc ctcaaactct
    40741 atcgatttta ccgtttgata atcggtatca gacggcaacg gaatccacaa attagttgtt
    40801 cctttcgagc cttgtggcac aactaaatca taagattgcg taaattcgta agtgtgggta
    40861 gtggtgtgga aattgttctg ttgaacagga gcagcaaaag ccgtcgcaca gcttgaagcc
    40921 accaaagagg caataagttt attcattgaa atgatcctta ttagagtgaa aaaacagtta
    40981 aaacttaaca tattaagtat tctaactacg gattgaggtt gcatattagc caatcgagat
    41041 gggaaaagca atgggggaga tgatttttta gatagtgcaa gcgtccacgc ttgtactaga
    41101 aacaaagcta aaataatcaa taggcacaag cgtggacgct tgcgccatca gagagaataa
    41161 caagcggtca aaaatcctca aaattttaca aatagatttt ttgccctaat tttgcacttt
    41221 caaatacgct ttcgatcact tttagcacaa aaatgacgtc ttcgagtttg ataattggct
    41281 cagcattgtg agcgatggct tggtacaaat catcaaacaa gttttgataa ctgacttcgg
    41341 catttcgata gggctggcga accacattac cttccacttc agtgtgtaaa attccccagt
    41401 tctccttttc ttcgatattc caatctttgc caataggttg tacgccattt ttcagcaaat
    41461 cttcttgatt atcgggagtt tgtttcagat aagagcctaa ttttccgtgt aatacaaatg
    41521 tcgggcttgg ttcacgagca tatcggctgg ctttcagcac cactttaaaa ccgttagcat
    41581 aatagagctg aatatcaaag ttatcatcaa ccaatgcccc ttcgtgctga taacgcacat
    41641 cagcatacac cgcctccggc ttcccgaaaa gatacaaagc ttggtcaatt aaatgtacgc
    41701 ctaaatcata cactaaacct gtaccaagct cgcctgattc tttccatact ttaacatttt
    41761 tctctttcgc ataacggtca aaacgaattt cgcaatctac caactctccc agtaaatttt
    41821 gctccattag cgattttgcc gtcgcaatat ggctgtccca acggcggttt tggtacacat
    41881 aaagcacctt tccttgccgc tttgcaagtt ccgccaactc ttccgcctca gccactgttg
    41941 ccactaacgg tttttcaact aaaacgtgtt tgcctgcaag caatgactct tttaccattg
    42001 cataatgggt ttgattcggt gtggtaatca gcactaaatc cacttctggc gttaaaagag
    42061 cgttgaaatc ccgcactgtt tctgcattcg gcaaccattc tgccgcattg ttagaggttc
    42121 gttcatatac ctttacaata ttaaaacgag catcttgttt caaaaacggg atatgaaaaa
    42181 ctcggctgga aaagccggca cctgcgatgg caatattgat gggttgcata gacaatcctc
    42241 ataaaatttt gatgttatct gcttaaataa acaagcggtc aaattttagg aaaattttgc
    42301 aaaaaacaga taaaatacga ccgcttgttt aactaatcat aggttttgca aacaatatct
    42361 ttttcttcac aaaacatttc actgtggttt gcacggcatt gcttttgtac atttaatttg
    42421 gctctgcctc ggctactatg ttcactacga tattcctgag taaatggctt tagagtacaa
    42481 atgtgaacct ctttggaatc aagtggatct gagacaccaa ttataatcgg catagggata
    42541 ccggcttgcc ccgtaggagt aaccggcacg acacagccac ttaatagtat gcttaaactt
    42601 attaaccaat aacgcatatt tttctccttt taaaatgtat aataaatcag aacggagcat
    42661 ctttatcgtt acagtaagct cttaatatct tgcctaattt cttggtattt ttattaaaat
    42721 ttcggcattt agggcatacc aaaagatgca actgcaaacg catatgttgt tgcaaacgaa
    42781 gtttctcatc acaagactgt gaaataagtt ctgttgcttg cctgcatttc attttgattc
    42841 ctctctaaac caattgcgag ataaacactc ttgtaaacgt aaacgagcac gatgaagtaa
    42901 tacatttaag ttagagagag aaatttcaca ttcttggcaa atttccgcac tactcatctc
    42961 caaatgttca cgcatcataa atactcgtgc ttgctgggcg ggtaatttat ttaaacaaat
    43021 atcaaaaatt gcccaaaatt ctttttggta agttgattga gctacccccc tccattcagt
    43081 tacatcttga tgttccaacc aatgatcgtg gcgatcgaaa aaggcacttg gtgattcttc
    43141 ttcctcacat agagaactga ctggaatatg tcgttttcgt gttctgagta aatctaaaat
    43201 tttgttcttt aaaatagcaa aaatccaagt tttaagtgca gcttctcgcc gaaaagaggc
    43261 tgaatgctta taggcattgg ttaaggcatc ctgtacaaca tcctcagcta aatctttatc
    43321 ggctagttgt agggtggcaa atttaaccat ttgctttcta atctcttcta tctgtgtaga
    43381 agatagactc ttcatatatc tcctttaggg aatacccaat aaaaaattac acttattttg
    43441 taagaattct agatcagctg agtccaaaat aataacaaca attcataaaa aaaggatagt
    43501 tcgatgaaaa aattaacaat tcaagatgtt acacccgaaa ctattttcta ccaacgccgt
    43561 aaaattatta ccgcgttagg tttaggtatt gcagcttctg cattgcctaa agtaagtatg
    43621 gcagaaacac aaagacactt gcaatcacta cagtttaaac cggatccaaa taaagggctt
    43681 gaactcactc cggaaaacaa agtaataggc tataacaatt tctatgagtt tggcgtggat
    43741 aaaagtgcac cagcaaaaaa tgcggcaaac ttcaaaaccg atccttggac attggaaatt
    43801 ggcggagaag ttgaaaatcc gtttagctta aatcatcaac aattgcttaa tacgtttcca
    43861 ctagaagaac gcatttaccg ttttcgctgt gttgaagcgt ggtcaatggt tgtgccgtgg
    43921 atcggctttg agttagctcg cttaattgag atggcaaaac caaccagtaa agccaaatat
    43981 gtggtctttc acactttata tgatcctgca caaatgccgg ggcaaaaaaa tcgcttgcta
    44041 ggcggtggga ttgattatcc ttatgtagaa gctttacgct tagatgaagc cttaaattca
    44101 ttaacactac tatccgtcgg tttatacggt aaaaccctgc caccgcaaaa cggtgctcct
    44161 attcgcttag tcgtgccttg gaaatatggc tttaaaagta ttaagtcgat tgtgaaaatc
    44221 acctttgctg aaaaacgccc actcactact tgggaaagtc ttgctccaaa tgaatatggc
    44281 ttttatgcta atgtgaatcc aaatgttgat catccacgtt ggtcgcaagc atctgaacga
    44341 gtaattggtg caggcgggtt attatccgtc aaacgccaac caacactaat gtttaatggc
    44401 tacgaaaatg aagtggcaaa tttataccgt ggcttagatt taaaggtgaa ctactaatgc
    44461 taacctggtt acgtatactc attcatcttg gctgtttatt accgctagtt tgggtagcac
    44521 agctattata tacgggtaat gaaacaatat taggtgccga tccgattaaa gaactggagc
    44581 attttctcgg ttatggtgca atcgtcattt tttgtataat gtttctactt ggtattgccc
    44641 tacaatacct aaagaaaaac cagtatcaaa ttttacgccg tccattgggc ttatgggcgt
    44701 ttgtatgggc agctctacat atttcaagct atctattgtt agaattaagc cttgatgtaa
    44761 aattattttt tagcgagctt gccggtcgcc catatttgat tttaggagca gctgcttttt
    44821 tcattctaag cataatggca ataacttcgc tgcctatgct aaaacgaaaa ttaggaacac
    44881 gctgggggac gattcaccag tgggcttatc ctgcattagt attggcgatg gtacattatt
    44941 attggtcggt aaagagcgta acattcgatc caattatcat cggagtctta gtgctgttta
    45001 ttgttgctca taaaatacag gctaaatttg caaaaaaata gcaaaatcac accgcttgca
    45061 gcagtcaaac tacatacaaa aaataagggg ctgtcctaga taacgactaa aac
//
LOCUS       DANLXD010000004        42950 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.004, whole genome shotgun sequence.
ACCESSION   DANLXD010000004 DANLXD010000000
VERSION     DANLXD010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 42950)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42950)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42950
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.004"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(54..128)
                     /locus_tag="PXD18_000175"
     tRNA            complement(54..128)
                     /locus_tag="PXD18_000175"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(94..96),aa:Gln,seq:ttg)
     gene            complement(154..238)
                     /locus_tag="PXD18_000176"
     tRNA            complement(154..238)
                     /locus_tag="PXD18_000176"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(202..204),aa:Leu,seq:tag)
     gene            complement(241..317)
                     /locus_tag="PXD18_000177"
     tRNA            complement(241..317)
                     /locus_tag="PXD18_000177"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(281..283),aa:Met,seq:cat)
     gene            complement(484..1308)
                     /gene="aroE"
                     /locus_tag="PXD18_000178"
     CDS             complement(484..1308)
                     /gene="aroE"
                     /locus_tag="PXD18_000178"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDL6300649.1"
                     /translation="MNRYAVWGNPIAQSKSPRIHQLFALQTQRNIEYIANLGDETAFE
                     QQLADFFASGAKGCNITAPFKERAFKLADEFSETALLAQACNTLKRLEDGRLYADNTD
                     GAGLVSDLERLGWLQKGHKTLILGAGGATKGVLLPLLKAGLEITLYNRTQEKAVVLAE
                     KFAKFGKIQTACLSDLANQLFNLIVNATSLGLQGKYVELPESVIASANIYDMQYAPNM
                     QTPFLNYARRCGATACQDGLGMLVGQAAFAFSLWEGQFPDVEPVLAQLKLEMQTVK"
     gene            complement(1315..1869)
                     /locus_tag="PXD18_000179"
     CDS             complement(1315..1869)
                     /locus_tag="PXD18_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5/YciO/YrdC/YwlC family protein"
                     /protein_id="HDL6300650.1"
                     /translation="MNNFLEIVNQLKQEEVVAYPTEAVFGLGCNPQSEKAVRKLLVLK
                     QRPEEKGLILLASDLKYLLPYIDEARMTEQAWQRLSHIGEQAITWIVPVKNTVPSYLT
                     GKFDSIAVRLCNVPAVVQLCEASGVALTSTSANLSGEPPCRNAKEVIDQFGQDFPVLH
                     ADTLGRENPSEIRDIFSQQIFRQG"
     gene            complement(1862..2398)
                     /locus_tag="PXD18_000180"
     CDS             complement(1862..2398)
                     /locus_tag="PXD18_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase DNA-binding C4 zinc finger
                     domain-containing protein"
                     /protein_id="HDL6300651.1"
                     /translation="MVLFKSTKQTETCPQCGSPLQIKQGKKGLFLGCSAYPECDYIKP
                     LHQAGHIIKQLDELCPECGGNLQLKQGNYGIFIGCSHYPECHFIVHEEAEVEEEFDCP
                     ECKQHKLIARKGRSGKIFYGCIGFPNCKFTLATRPINHLCEKCGCELATIKKIKGKQF
                     TICANKSCQHQTELKPNE"
     gene            complement(2408..2719)
                     /locus_tag="PXD18_000181"
     CDS             complement(2408..2719)
                     /locus_tag="PXD18_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HDL6300652.1"
                     /translation="MNREKITFFSRFEADILSGKKTITIRDKSESYFQPNQELAVFTN
                     ETDRFFANIKVLSVTPIVFDELNEQHAKQENMSLAELKQVIREIYPNDNAFFVIEFTL
                     I"
     gene            complement(2712..3188)
                     /gene="recX"
                     /locus_tag="PXD18_000182"
     CDS             complement(2712..3188)
                     /gene="recX"
                     /locus_tag="PXD18_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HDL6300653.1"
                     /translation="MTTSTTKTNKYTAVNYLLYLLSKRDYSEQELRQKLKQKEYELTE
                     IDAAIEKAQANQWQSDERFCTTFIRYRSMQGIGPRRLKQELKLKGVKDWLINQELENA
                     EVDWFELAEQIFEKKRPLVWDLKAKQKMWRFMVSRGFYNDHFSHLMALDYSSDEYE"
     gene            complement(3247..4353)
                     /gene="recA"
                     /locus_tag="PXD18_000183"
     CDS             complement(3247..4353)
                     /gene="recA"
                     /locus_tag="PXD18_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HDL6300654.1"
                     /translation="MAEKKSQKNTPVKQIDPEQKEKALAAALAQIEKQFGKGSIMKLG
                     DTQALDIEAVSTGSLGLDSALGIGGLPMGRIVEIYGPESSGKTTLTLSVVAQAQKNGK
                     TCAFIDAEHALDPIYARKLGVDTDGLLISQPDNGEQALEICDALVRSGAVDVIIVDSV
                     AALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKATNCLVIFINQIRMKIGVMFG
                     NPETTTGGNALKFYASVRLDIRRSGVVKDGDEVIGSETKVKIVKNKVAPPFREVQFDI
                     MYGEGIARMNELLILAESHGFINKAGAWFSYEGEKIGQGKNNAIKWLKEHPEVASKIE
                     QDIRNLLISNPTFTATPDSENADNADDEFSEEEL"
     gene            complement(4454..5074)
                     /locus_tag="PXD18_000184"
     CDS             complement(4454..5074)
                     /locus_tag="PXD18_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HDL6300655.1"
                     /translation="MCRFPLFETLSIIDGKVQNLQYHQQRFEQATQEYFGCEPRFSLA
                     DILVVPEASQRGKVRCRIDYNATEFELKFFIYSPKKVERFRLVEVENWDYHLKFSDRK
                     RFDLLPILQNEEVIILNNGYVSDCSIGNLLFLKQGIWYSPQHYLLKGTQLSKLLDEGK
                     VVLAKIAKQDLHQYEKIMLINALNPFEEPRALPCSQIYFCDLDRKS"
     gene            complement(5052..6026)
                     /locus_tag="PXD18_000185"
     CDS             complement(5052..6026)
                     /locus_tag="PXD18_000185"
                     /EC_number="2.6.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component I"
                     /protein_id="HDL6300656.1"
                     /translation="MQDFIHQANHYGQAKRPFFFLIDFEQQKPLIFPLEQAHASGLFF
                     EFFCKSNLEKPVEKPTKAFELSANPIPFSEYQTGFELVKKEIQAGNSYLLNLSYPTAI
                     ETNYSLAEIFAASKAKYKCYLQGRFVCFSPECFVRIENNRIFSYPMKGTINANEENAE
                     QKLMASEKEFTEHNTIVDLIRNDLALVAKNIEVTKYRYVEKVETHRGAILQTSSEICG
                     ELGENWQENIGSILAKLLPAGSISGAPKEKTVSIIQQAELGKRGYYTGIFGYFDGESL
                     ESAVAIRYIAQTSNGLVFHSGGGITSQSVLTDEYNELLEKVYVPISAI"
     gene            6136..7743
                     /gene="rmuC"
                     /locus_tag="PXD18_000186"
     CDS             6136..7743
                     /gene="rmuC"
                     /locus_tag="PXD18_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HDL6300657.1"
                     /translation="MHFQEIGIYIALAVCVLVGVYLFFLKSRYQRNAYELSQDLGKIT
                     ENFEQIQQKYEVLAQEKNQLEQWAIQQQTKYEAVSERLNERDGQLQRFQQKIELAEQQ
                     ENQLERYINELKERVGSSQAKAESLEEQLQFSQSSLSTKERENQALFSRLNEVQNELT
                     ELRTTLSEKQANFEAQQRNFIEVKQQLNVEFQHLAQQILDEKSKRFSETNQSSLEALL
                     KPFKEQIEGFQKRVNEVHSESLKGSANLEAEIKRVLQIGVSMSEEAQNLATALKGNNK
                     IAGNWGEVQLESALQSAGLLAGEHYQAQESFRDEEGRRFAPDFVVHLPDQKHLIIDSK
                     VSLVAYDQAVRSEENFAISQALDEHCRSLRNHIEGLSKKNYSALLGIKSPDFVLMFIP
                     IEPAYIEAMKHDPQLFNFGYERNVILVSHTTLMPILRTVANLWRIERGNSEAREISEK
                     AGEIYNQVCAVADRLAKLGNTLNTANNQYNQTVTSLVGRQGLLGKVERFQHLSSKASQ
                     IVPQVELIENEVDTIKLEMVSRELLEE"
     gene            7806..8390
                     /locus_tag="PXD18_000187"
     CDS             7806..8390
                     /locus_tag="PXD18_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component II"
                     /protein_id="HDL6300658.1"
                     /translation="MLKKLLIIDNHDSFTFNLVDLLRKLDVPAKVVLVEELDLNEVEH
                     FSHILISPGPDVPRAYLQTFAMLERYHQTKSILGVCLGHQTICEFFGGKLYNLNDVRH
                     GQQRTLTQIEPNPIFKGLPKQLKVGLYHSWGILQNSLQNTPLVPTAVCDQNVLMAFKH
                     QHLPIFGVQFHPESFITEFGQQMLANWLEITQDF"
     gene            8487..9569
                     /gene="prfA"
                     /locus_tag="PXD18_000188"
     CDS             8487..9569
                     /gene="prfA"
                     /locus_tag="PXD18_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HDL6300659.1"
                     /translation="MKDSIINKLESLSERHEELQALLGDASIISDQDKFRAYSKEYSQ
                     LEEVVGTFNRWKKLNNDIEEAQLLLDDPDMKDMAAEEIAENKAEIENLEQHLQILLLP
                     KDPNDEYNAFLEIRAGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYK
                     EIIVKISGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEIN
                     PSDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLAS
                     RIVQVEQERQAAEQADTRRNLLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMN
                     GKIDELIQPIITEYQADQLAALSEQN"
     gene            9681..10283
                     /locus_tag="PXD18_000189"
     CDS             9681..10283
                     /locus_tag="PXD18_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300660.1"
                     /translation="MRKLGLLAVFTLVLSACSNSTKIEQTILSKQDIVGSWVCAIKYD
                     DLKVSTLDFSEFKANGEMTNFGDISDENFEPIKFTYVTGDKGKWDLKGNRLVIDYDLS
                     ERKVKRTTPKKFLEFLKQEERKASKTAKKLLKYEQGIFNILSDQKNTENSKIILDILK
                     FGHSRMAIQQNMGDKVYSGGCVTADKAEEYLDILKNRNSK"
     gene            10283..11149
                     /gene="prmC"
                     /locus_tag="PXD18_000190"
     CDS             10283..11149
                     /gene="prmC"
                     /locus_tag="PXD18_000190"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDL6300661.1"
                     /translation="MDYREWLTFAEQKLLENSGADPYLNAKFDANLLLQAVTKRSKSA
                     IFAFSETLLSESELAELAEKLARRAKGEPMAYILGYREFWSLPLKVSPATLIPRPDTE
                     RLVELALEYANKRLGNQKMLQILDLGTGTGAIALALASELGEKAQIIGVDFQNEAVQL
                     AEENRRNLGLNQVTFLQSDWFSSLANQQFDLIVSNPPYIDESDENLTVGDVRFEPLTA
                     LVADNKGLSDLQKIIENAPLHLKPQGALMLEHGWKQGNLVRDLFDLHLWEQVETAQDY
                     AGNDRVTKAILK"
     gene            11158..12024
                     /locus_tag="PXD18_000191"
     CDS             11158..12024
                     /locus_tag="PXD18_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB1 family protein"
                     /protein_id="HDL6300662.1"
                     /translation="MDDIIEELLKELEDPKVTISETELKKFLYREILRLTTLIDKNVS
                     EQQVFGQMSALVKKARYNVNGEGDEERINQLLHLVYREWGFHCYYEDYFHTENLLLNQ
                     VIRKRRGMPVSLGAVALYLSAVLDLPLYPVNFPTQLVLRAEIHQPNGATKVRFINPWN
                     GEFLTIEMLNKWLEGEMGFGVEVTPDLLRRAEPQELLERVETVFKMALTREGKYEETL
                     RLIEYRLAFSPEDPYEIRDRGMVLASMDCYQAALEDINYFIDQCPEDPSAEILKMEVK
                     GLQQKSQESVVH"
     gene            12114..12968
                     /gene="kdsA"
                     /locus_tag="PXD18_000192"
     CDS             12114..12968
                     /gene="kdsA"
                     /locus_tag="PXD18_000192"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HDL6300663.1"
                     /translation="MTDKIVKVGNIEVANHKPFTLFGGMNVLESRDMALRVCEQYVEV
                     TQKLNVPYVFKASFDKANRSSIHSYRGPGMEEGLKIFQELKQTFGVNIITDVHEIYQC
                     KPVAEVVDVIQLPAFLARQTDLVEAMARTGAVINVKKPQFLSPGQMGNIVEKIAECGN
                     DQVILCDRGTNFGYDNLVVDMLGFGIMKKVSKGCPVIFDVTHSLQCRDPFGAASGGRR
                     DQVTELARSGMAIGLAGLFLEAHPDPNSAKCDGPSALPLSKLEAFVSQMKAIDELVKS
                     FEEIDTSK"
     gene            13189..14136
                     /locus_tag="PXD18_000193"
     CDS             13189..14136
                     /locus_tag="PXD18_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HDL6300664.1"
                     /translation="MLNIVFLDRTGIPATHDIPRPNFPHTWTEYATTSADQTFERVKE
                     ADIIITSKVLLQRDLLAKLPKLKLIAITATGTNNVDLAAAKELGIAVKNVTGYSSVTV
                     PEHVIGMIYSLKHRLADYHRDLITSDRWATCGQFCYVDYPIHDVRGSTLGIFGKGNIG
                     AEVARLAQAVGMQVIFAEHQGATEIREGYTAFEEVFKQADIISLHCPLTEQTQNLINA
                     ETLALMKPTAYIINTGRGPLIDEQALLEALEQGKIAGAALDVLVKEPPEKDNPLMLAA
                     KRLPNLLITPHVAWASDSAVTTLVNKVTQNMEEFVATGM"
     gene            14234..15406
                     /locus_tag="PXD18_000194"
     CDS             14234..15406
                     /locus_tag="PXD18_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HDL6300665.1"
                     /translation="MNLTPFFIAFRYFRSKSADRFGRLVTNLASLGIVLGVMALVIVL
                     SVMNGLENMQKTNLLSTLPHAIITPQEGHFAKGEKLALPEFAKQSVVINRANVIIQSS
                     QGINAGQLIGVENATDDPLLVAENIPALLPSGEFKVVIGSRLANKLNVTVGDKLRLMI
                     TENSQYTPLGRVPVQRLFEISGVYQSNREASEFTLFANLADVGRLLRISEDQVQGVRL
                     YLQDPFQVTELSQYFDAERYQISDWREQKGEFFQAVKMEKNMMGLLISLIIVVAISNI
                     VTSLSLMVVDKQGEIAILQTQGLTKKQVMQIFVFQGAIVGVIGSIIGGLLGVLIAYNL
                     DQIILLLNPSIHLPTLISGTQIAVIVGVSMLLSLLCTLYPAYRASKIEPAQALRYE"
     gene            15423..16106
                     /gene="lolD"
                     /locus_tag="PXD18_000195"
     CDS             15423..16106
                     /gene="lolD"
                     /locus_tag="PXD18_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HDL6300666.1"
                     /translation="MTELLRCEHISKFYDEGEQKVQVLKEVSFSMNEGELVAIVGSSG
                     SGKSTLLHTLGGLDQPSTGEVWIRGQSLQQLSSDKLALLRNQNLGFVYQFHHLMADFT
                     ALENVMMPMLIGKQNKTEAANRAEKMLQAVGLAHRMTHRPSALSGGERQRVAIARALV
                     NNPALVLADEPTGNLDQKTTESIFELIQQLNQEQNIAFLLVTHDLNLANKLSRSLVMR
                     DGVLSEGSL"
     gene            16103..17368
                     /gene="lolE"
                     /locus_tag="PXD18_000196"
     CDS             16103..17368
                     /gene="lolE"
                     /locus_tag="PXD18_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolE"
                     /protein_id="HDL6300667.1"
                     /translation="MSTPFFISWRYQRGKQKNKLVSLIALFSNIGIALGVAVLIIGLS
                     AMNGFERELNNRVLSVVPHAELVSFQGNQPQPIFDSKKLEALIKKSQNVTASSPFVSF
                     TALIENGAQLKIAQVRGVDPKKQDQASQLSQFIPPEQWQAFNQQFQADEDGLILGAGI
                     AKALEVEAGDEVTLLIPQPTEDGKLAQPLRFNLNVTGILRLDGQLDHSYALIPLNKAQ
                     ELMEYQANEVSGLEISLANPFDVQQLEMPQLNGYTQPLYLNTWIDKFGYMYNDIQLIR
                     TVMYIAMVLVIGVACFNIISTLIMAVKDKQGDIAILRTLGANNGFIRRIFLWYGLISG
                     MKGALFGLILGVILSLNLTAIIKAIEAFFEVKLLSDGVYFVDFLPSELHWQDVVYVLA
                     ATIILSLFASLYPANRAAKLEPAKVLSGH"
     gene            complement(17443..19374)
                     /gene="thrS"
                     /locus_tag="PXD18_000197"
     CDS             complement(17443..19374)
                     /gene="thrS"
                     /locus_tag="PXD18_000197"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HDL6300668.1"
                     /translation="MPIITLPDGSQRSFDNPVSVMEVAQSIGAGLAKATIAGRVNGER
                     RDASDIISQDSTLEIITAKDEDGLEIIRHSTAHLLGHSIKQLFPDVKMAIGPTIENGF
                     YYDIDLDRSLTQEDLDALEKRMLELAKTNYDVVKRPVSWQEARDTFEKRGEPYKMAIL
                     DENIERTATPALYHHEEYIDMCRGPHVPNMRFCHHFKLQKVAGAYWRGDSKNKMLQRI
                     YGTAWADKKQLAEYLQRLEEAAKRDHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRE
                     LETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNC
                     PGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQ
                     IESEVISCIKMVYDIYSTFGFTNIAVKLSTRPENRIGDDAMWDRAEKGLANALRNNGL
                     EYEIQEGEGAFYGPKIEFALRDCLGREWQCGTVQLDFALPGRLAASYVAEDNGRRTPV
                     MIHRAILGSIERFIGIITEEYAGFFPTWLAPTQAVVMNITDSQADYVQQVVKQLSDAG
                     IRVKADLRNEKVGFKVREHTLRRVPYMLVCGDKEIAEGKVSVRTRKGADLGTYLVSDL
                     VEILKNQIKARELKLLGEE"
     gene            complement(19541..20890)
                     /locus_tag="PXD18_000198"
     CDS             complement(19541..20890)
                     /locus_tag="PXD18_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6300669.1"
                     /translation="MNSTKFYSLYSGIFFLFFGYGLFLNSAGIKLAEMGITDIIIGLL
                     NAAFFIGAALSTIFAHRIVSSVGHIRSFSVFCAVFAIAALGHIMIDTLWIWGVLRIIL
                     GFCHYSLLLLVESWLSEKTNVDTRGKVLATYNIIFYLAFILGVSLLSLELSSRNIFIL
                     STILVVMSMIPIALTKMVQPDIPARERISIPKLFAISPLALATSFISGMLVNGFFTMA
                     SVFLLKFSFSLSEISLYLMISMIGGFISQMPMAILSNRIGRRNAILACSVIATLTALA
                     GLFAIFQENLTAWGQYIIAFFFGCSLFSLYALSIARANDELPNNMNTVEVSRGLLFCY
                     GVGALVAPPLIGFAMSLSAEYGFYALFGLFSLSLFICAFRTKSIPKAERAEMQYATPI
                     ATASPLEEIEVVEDALIPFDEEAVQEYQAQLEILEQDPQTENENIELDEGAAENSKV"
     gene            complement(21165..21656)
                     /locus_tag="PXD18_000199"
     CDS             complement(21165..21656)
                     /locus_tag="PXD18_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HDL6300670.1"
                     /translation="MFTTQLIQTKRWLEANSITTFWLKTFIGATLLAIFAQISVPMYP
                     VPITGQTLALTVVGFAMGRKAATAAVLLYLFEGAIGLPVFAGGASGFHHFFGPTGGYL
                     LGYIPTAYFLGYYSDKGVLNSFWKSLFVALIASVITFAFGLAQLSLYQKAQYYKRAYI
                     HLF"
     gene            21737..22504
                     /locus_tag="PXD18_000200"
     CDS             21737..22504
                     /locus_tag="PXD18_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--protein ligase"
                     /protein_id="HDL6300671.1"
                     /translation="MVKPVYIYCDEGSSEIGVQSLLLAVKQHLQRPAYLINAKQIIQS
                     KFSDGCLLIMPGGADLPYCKKLNGEGNRRIRQFIEQGGAYLGICAGAYYGCAELNFVG
                     RDYSVNGNRELALFNGIAGIAKGSLPQFTNGQLYDKNIGSKAIVEVTLAEGGKMPFYY
                     HGGCCFEPNSTTVIYNPLAYYPDGSVAMIEGELGRGYYLLSGVHFELQAVVYWQKIVN
                     CCENLDIKTQEEAICSNFNVNYGSQIWQHLKQRLNQA"
     gene            complement(22495..23289)
                     /locus_tag="PXD18_000201"
     CDS             complement(22495..23289)
                     /locus_tag="PXD18_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDL6300672.1"
                     /translation="MRFFDTHTHLDYLAESLNLSIPELVENAKQHQVECILIVAVFAK
                     NFAKVTACAKQKPENLVYGLGLHPLYIQQHQQQDLILLENLLSQQDPQCTAIAEIGLE
                     KAVSEVSTPELWKKQCEFLEAQLSLAKKFNLPVNLHSRKSHDQLFVFLKKAQLTKTGV
                     VHGFAGSYEQAKRFVDLGYKIGVGGTITYERANKTREAIRKLPLESLLLETDSPDMPV
                     FGFQGQPNRPERLLVTFNSLCELRTESPNLIAETIWQNSERLFFYA"
     gene            complement(23350..24936)
                     /locus_tag="PXD18_000202"
     CDS             complement(23350..24936)
                     /locus_tag="PXD18_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005667512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HDL6300673.1"
                     /translation="MLWFFFCVAVLVLGYFTYGKIIEKIFVINPKRATPAYAMNDGVD
                     YMPMSKTKIWLIQLLNIAGTGPIFGPILGALYGPVAMLWIVIGCIFAGAVHDYFCGML
                     SIRNGGATMPNLAGKFLGRPVKLFINVMALILLLLVGVVFVASPAQLLSTITMDIAGA
                     TQSAMELGDVEAIKESVASGGVTVWGMDKATVISVWTLIIFAYYILATLLPVDKIIGR
                     IYPFFGALLLFMSVGMVYGLVSAHLSATDPIDFFRTVNADGQGLTWEKFTQNFQVKGD
                     VPIWPLLFLTISCGALSGFHATQTPLMARCAQNEKEGRFIFYGAMITEGVIALVWCAV
                     GLSFYENPQALQDAISAGSPSKVVYDSSLHFLGFIGGIFAVLGVVVLPITSGDTAFRA
                     ARLQLAEIFGLEQRTLVKRLYIAVPLFVLGFIVSKVDFSVLWRYFTWANQMTAMVMLW
                     TAAGYLYRYKKFHWVCSIPAWFITTVCATYLANNKIGFGLDYELSVYIGFAITVVCVI
                     CFFAFLKPSEARDEDAYVTN"
     gene            complement(25122..26975)
                     /gene="dxs"
                     /locus_tag="PXD18_000203"
     CDS             complement(25122..26975)
                     /gene="dxs"
                     /locus_tag="PXD18_000203"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HDL6300674.1"
                     /translation="MEKKYPLLSEINSPEDLRLLSKDQLQTVVDELRAYLLESVSQTS
                     GHLASGLGVVELTVALHYVYQTPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKDGIH
                     PFPWREESPYDVLSVGHSSTSISAGLGIAVAAEKENAGRKTVCVIGDGAITAGMAFEA
                     LNHAGALHTDMLVILNDNEMSISENVGALNNHLARIFSGSLYTSVRDGSKKILDKVPT
                     IKNFMKKSEEHMKGVIFSPESTLFEELGFNYIGPIDGHNIDELVKTLSNMRELKGPQF
                     LHIRTKKGKGYTPAENDPIGYHGVPKFDPTAAELPKSKAAPTYSNIFGDWLCEMAERD
                     PKIIGITPAMREGSGMVEFSKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSS
                     FLQRAYDQLIHDVAIQNLPVIFAIDRAGIVGADGQTHQGAFDLSFMRCIPNMTIMAPS
                     DENEMRKMLYTAYTMNTPSAIRYPRGNAKGVKLEPMQRLEVGKGNIIREGKKVAILNF
                     GALLDEAKIVAEKHNYTLVDMRFIKPLDEALLQKVADSHELLVTLEENAIQGGAGSFV
                     NEYLQNIGKIKPLVMLGIPDFFVPQSTQAEAYADLGLDAQGIEAKIQKFDI"
     gene            complement(27020..27832)
                     /gene="suhB"
                     /locus_tag="PXD18_000204"
     CDS             complement(27020..27832)
                     /gene="suhB"
                     /locus_tag="PXD18_000204"
                     /EC_number="3.1.3.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012621556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-1-monophosphatase"
                     /protein_id="HDL6300675.1"
                     /translation="MNPMLNIAIRAARKAGNIIAKGYEQSPQDTQVLQKNTNDYVTEI
                     DKAAEAAIIDVIRKSYPEHSIVTEESGVLNGSNENVQWVIDPLDGTTNFVKRLPHFAV
                     SIAVRENGRTTVGVVYDPIRNELFTAVRGEGAKLNEFRLRIDAERRDLKGTVIATGFP
                     FKVIRHRDAHLNMLEGLMNNGVADFRRTGSAALDLAYVAAGRVDGFFEIGLKPWDFAA
                     GELIAREAGAIVTNFVGGTDYLKTGNLVVGNGRVVKEILNSIQPTLTEELKA"
     gene            28013..29047
                     /locus_tag="PXD18_000205"
     CDS             28013..29047
                     /locus_tag="PXD18_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA methyltransferase"
                     /protein_id="HDL6300676.1"
                     /translation="MQFKENNQPRFKHREERRSDECSPRFSDKGKMRGNEGKSDRPHK
                     LHFKRDEAYSRSEQIYPAEGKKASGEGSVQIWVKGGNSSVKEKKNGPLSPRAPEKIKK
                     NRLEEMKVYGENACISLFQQRPESIVRLWATVEGAKKLGDLMSYLAQHKKAYHVIDRE
                     EMERVTGTEHHGDMCLLVKKTASFVLEGYLQVPKKQDCLVLLDGVNNAQNVGGIIRTC
                     AFYGVKGIITENVDSLNSSAAARVAEGGLEFVRALETKNKHIALVQLRQAGYQIVHLT
                     RHKQAPSLTKIKLAEKVVFVLSEIPASDVAYAEDTTIQLSFNNPLNSGLNVAVNAGIL
                     LNQWYQTHIL"
     gene            29057..29941
                     /locus_tag="PXD18_000206"
     CDS             29057..29941
                     /locus_tag="PXD18_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HDL6300677.1"
                     /translation="MNQQKPFEVIAIVGTPRHDSAFETHLAVYNWLKDRDYQILVETE
                     VATQLQLKESYSLDQIGQRAELVIVIGGDGNMLGIARALAKYRVPLIGINRGNLGFLT
                     DIAPQTAFEQLYSCLVKNEYVIEERFLLEAFIERNGKIIAANNALNEIVVHPTQVARI
                     IEFEVYIDGKFAFSQRADGLIVATPTGSTAYSLSAGGPILTPNMNAMALVPMHPHTLS
                     SRPLVVDGDSQISLRFAKYNTPDLEVICDGQVNMHFTPEDRVLVRKSPDKLQLLHLKD
                     YSYFTVLGSKLGWASKLF"
     gene            30080..31057
                     /locus_tag="PXD18_000207"
     CDS             30080..31057
                     /locus_tag="PXD18_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1852 domain-containing protein"
                     /protein_id="HDL6300678.1"
                     /translation="MTTNFKCQVHTIEFNEDYQPEQSTRLTTNFANLARGENRKQNLQ
                     NAIAMINNRFNDLANWDNPNADRYSVKLDIVSLDIDVEGKGEFFPAIEWLKTYVIDYK
                     TGKTIDGIIGNNFSSFVRDYDFSVLLLDHNKDKPQFSVPEGYGELHGKLFKHLLASPE
                     YTAKYKKPPVICLSVATTRTYTRTTNVHPILGVEYLQDSYSLTDAYFAKMGLKVRYFM
                     PPKSVAPYAFYFDENADLLNDYTNLELISTIATMEAFQKIYRPEIYNANSVAGQVYKG
                     SLTYQDYSVTKVEYDREERTQLAIKQGKYTEEHFIKRYQAILEAWATEE"
     gene            31145..32176
                     /locus_tag="PXD18_000208"
     CDS             31145..32176
                     /locus_tag="PXD18_000208"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HDL6300679.1"
                     /translation="MSNILLPTSTAGSLPKPSWLAEPEKLWSPWKFEGEELLQAKRDA
                     LLVSLAEQIAAGIDIVSDGEQTRQHFVTTFIEHLEGVDFSKREIVRIRNRYDASVPSV
                     VGAVSRPKSVFVDDAKFLRAHTDKPIKWALPGPMTMIDTLYDGHYKSREKLAWEFAKI
                     LNEEAKELEAAGVDIIQFDEPAFNVFFDELNDWGVAALERAAEGLKCETAVHICYGYG
                     IKANTDWKQTLGNEWRQYEESFPKLQQSKIDIISLECQNSRVPMDLIELVRGKKVMLG
                     AIDVATNIIETPEQVADTLRKALQFVDADKLYPSTNCGMAPLSRQVAQGKLQALSQGA
                     AILRAEFAK"
     gene            32264..32485
                     /locus_tag="PXD18_000209"
     CDS             32264..32485
                     /locus_tag="PXD18_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300680.1"
                     /translation="MLNLFKKPIKKSSFEAWAKLMDDVAKVAILAIPVILYGEYSLLM
                     KFTHSITLFAVVYFLLATARLFRETAEEM"
     gene            32761..34023
                     /locus_tag="PXD18_000210"
     CDS             32761..34023
                     /locus_tag="PXD18_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000919159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HDL6300681.1"
                     /translation="MLKRDMNIADYDAVLWQAIQDEDRRQEEHIELIASENYASPRVM
                     QAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKALFGADYANVQPHSGSQAN
                     AAVYMALLNPGDTILGMSLAHGGHLTHGASVSFSGKIYKAEQYGITDEGLIDYEALRK
                     QAQEVKPKMIVAGFSAYSQVMDWAKMREIADEVGAYLFVDMAHVAGLIAAGVYPNPLP
                     HAHVVTTTTHKTLAGPRGGLILSASGDEEMYKKLQSAVFPAGQGGPLMHVIAAKAVCF
                     KEALEPEFKAYQQQVVKNAKAMVEVFKQRGFDVVSNGTENHLFLVSFVKQGLTGKAAD
                     AALGAANITVNKNSVPNDPQKPFVTSGIRVGTPSVTRRGFKEAEVTALAGWMCDVLDS
                     IGKDNHEQVIAETKAKVLDICKRLPVYA"
     gene            34181..35017
                     /locus_tag="PXD18_000211"
     CDS             34181..35017
                     /locus_tag="PXD18_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HDL6300682.1"
                     /translation="MLPRISSFLASLFMAFFLLGCSVSTQSLNEQNVDSIGQIIDLNT
                     NQTISFTELLSRLSSQDYVLVGEEHTQLIHHQIELYLFNQLTKKAKLHLIALEMLNVD
                     QQPAIDRIQFNRPVNLSATDLREAIQWQKWDWKMYQDLVVESLGSNSRVIATNLTDKE
                     VEILLNGAEPLKGSVSTSSEVKQKIAQLLLSMNHGMPYPMENMVAVQQFRDRRMAEKL
                     VKNALSTSLLIAGNHHVRKDLGVPLHIAEYDRTKKVAVLMLKTEREEITSSQADYLWV
                     TQ"
     gene            35071..37228
                     /locus_tag="PXD18_000212"
                     /pseudo
     CDS             35071..37228
                     /locus_tag="PXD18_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484758.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            37335..37973
                     /gene="purN"
                     /locus_tag="PXD18_000213"
     CDS             37335..37973
                     /gene="purN"
                     /locus_tag="PXD18_000213"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HDL6300683.1"
                     /translation="MKKFVVLISGNGSNLQAMIDAQKSADTSGQICGVICNKADAYGL
                     IRAKQAGIPTFVFSRKDYQSNVEMDLAIAEQIEQLGAELIVLAGYMKILTPEFTQHFA
                     GKILNIHPSLLPKYPGLNTYQRAIEAGESEHGTTIHFVNEEVDAGAVVLQAKVPIYPE
                     DEIEDVMARVVEQEHRYYPLVIEWFCSGRLVSQHGKAYLDGKLLPACGYAED"
     gene            complement(37994..38800)
                     /locus_tag="PXD18_000214"
     CDS             complement(37994..38800)
                     /locus_tag="PXD18_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6300684.1"
                     /translation="MSNLLTCQNLSIVHQQKKLLEIQEIAFEQGKFTAIIGPNGAGKT
                     TLLKALSGNNAQTNSAVFYQHQRLTDLNGYALAQKRAMLSQQSQIAFPLKVEELVQLG
                     REPYRQSEFAKFNEKITAWAMETMSLTALKERSSIQLSGGEQHRAHIARVLAQLVPEP
                     NADLSGSWLLLDEPTNHLDIHHQYQLFSLLQKLKQQGLTIIAILHDPALAINQADHIL
                     MLKNGEKFAEMSAKAIAESCLLDELYEMKMGCRYCPHSGQYYLCPALAES"
     gene            complement(38800..39786)
                     /locus_tag="PXD18_000215"
     CDS             complement(38800..39786)
                     /locus_tag="PXD18_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL6300685.1"
                     /translation="MKLHLTLIFTLIISLVICTHLGAMSLPLSAWHCNNAECESAAYI
                     LWQIRLPRLLGALFIGAALAISGATMQGLFRNPLVDPGIIGVSSGAALAAALYIVVIQ
                     PLLPESISYYALPIAAFLGGWLVTFMLYLLSQRNGQLHIAIMLLIGIALAAFSGALTG
                     ILIYVADDNQLRSLTFWSMGSLAGMNWQMVAMMAAVVFICSPLIWREHRALNALTLGE
                     EDAQYIGFDIAKVKRRLVFYVALLTGTSVACVGAIGFVGLVIPHLMRLLGGSNHRHLL
                     LNSLVCGAILLMIADTLARTLAAPAEIPIGIFTALFGAPFLAVMVWKSGKHI"
     gene            complement(39797..40663)
                     /locus_tag="PXD18_000216"
     CDS             complement(39797..40663)
                     /locus_tag="PXD18_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6300686.1"
                     /translation="MEYKMRTLLFSFIALSMCLNTTKAAEKIVSTAGYASEIVAALGK
                     ADKLVGVDTTSVKPQTIMEKKPKIGYRRQLSAEGILSLTPDLIILAPDAGPNAVIEQI
                     KASGIPLLHLGEKPSLAGIREDIQQIAKAIGAESEAKQLTETILADEKKLADIRSQHS
                     TDKEVLVLIDTASQGIFGLGKKSVGDHFLTLLNLNNSFNAEGNKPLANEALAASNADV
                     ILLASRNQAKESATISKLAESSPQYAQLTNTQAGKKGCVFAINILDALGFGPYTAQYA
                     HQILTTIQPCLK"
     gene            40770..42929
                     /locus_tag="PXD18_000217"
     CDS             40770..42929
                     /locus_tag="PXD18_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
                     /protein_id="HDL6300687.1"
                     /translation="MQIKQTVLAIAITPFISQLSLAQETKISSIELDTIEVNEQQENL
                     LKQQAVMSNEDLVRYSTDMGVPQTGRFGPQGFNIRGVEGNQVAVTVDGISQAASNNYA
                     TFSRYSYYNKSRPEIDTELMSDVTIEKGSSTKVGNGALGGSVNYKTKTVSDILMKGRQ
                     FGGMLKYTYNGQNKENIETAGIAADGQYADALVMYSHRQGHETQTTSKGPDIMGSGRG
                     LPNPYKNNQYSYLAKLGLKWNDENRLELKTSKQRSKNAGQELSYSTVTLRDFLDVQEI
                     ETYGVTYLYTPKNSILENIKVAVTKQDTEISGINDQITIARGTKTDNTKRAFNTKNVE
                     GSLGVTFKPVDLGNTEHKLSTELGYGVSDFSFDMQTYTAGITPTDQNMQSPAKTKSFH
                     ILMGDSILLTQNLSAHLNARYEQSKLHSDDNSLSDKTFNNWAGDIGLNYQLSPVWQIG
                     YKLSRGFRTPTASEMFFNREVQGRGASQTFLANTNLKPETSLGNEISLVGNGSLGSLS
                     VAAYHTHYRNLIDLATIGNNIYQSQNVNRAKIKGVDINGTLDLNTAWNAIPQGFELNG
                     GFGYARGKRNDGTDLLTVQPLKALFGIGYRAVNNDWAIHLNGTYTQGKKAKYAQQYAI
                     LANTGYLSYDKSLTTYPYLSNSATVFDLVAHKKFGERAIVKVGVYNLFNKKYWTWDSL
                     RTIGITSPGVANSITGEGLNRYLAPERYVMASVEFKF"
BASE COUNT        13037 a         8567 c         9113 g        12233 t
ORIGIN      
        1 aagaaaaaac taacttacgt tagcttatat agatttgaat gtttgaaatt aagtggctgg
       61 ggtactagga ttcgaaccta gggatgccga gatcaaaacc cggtgcctta ccgcttggcg
      121 ataccccaac actaattttt gttaatcgat aaatggtgcg ggacgaggga cttgaaccca
      181 cacacctcgc ggcgccagaa cctaaatctg gtgcgtctac caatttcgcc agtcccgcaa
      241 tggtggctac agcgagattc gaacttgcga ccccaacatt atgagtgttg tgctctaacc
      301 agctgagcta tgtagccatt tgcgttcacc atatcggtca acggagtgca ttatgctgat
      361 tttagggctt tccgtcaaat acttttttta aaaaatttga atttttgatt cgcttgtata
      421 gttattcgtc gttttggctt aaatctagca ttttttgttt ataaaataat agcttatatt
      481 ctgctatttc accgtttgca tttctaattt taattgagcc agtacaggct caacatcggg
      541 gaattgccct tcccacaaag aaaacgcaaa cgctgcctgt ccaaccaaca ttcctaatcc
      601 gtcttggcac gctgttgctc cacaacgcct tgcataattg agaaaaggag tttgcatatt
      661 gggggcatat tgcatatcgt aaatattcgc cgatgctata acagattcag gcaattcaac
      721 atatttgcct tgcagaccga gagaggtggc attgacgatt aaattaaaca gttggtttgc
      781 caaatcgctt aaacaagcgg tctgaatttt gccaaatttt gcaaattttt cggctaaaac
      841 gaccgctttc tcctgcgtgc ggttatatag agtaatctct aaccccgctt taagtaacgg
      901 aagtaatacg cctttggttg ctccacctgc tccaagaatt aaggttttat gccctttttg
      961 taaccaacct agccgttcca aatcagaaac taaaccggcc ccgtcggtat tatcggcata
     1021 taaccgtcca tcttctaagc gtttaagcgt attacacgcc tgtgccaaca aagcggtttc
     1081 gctaaattca tctgccaatt taaaggctct ttctttaaaa ggggcggtga tgttgcaacc
     1141 ttttgctcca gaagcgaaaa aatcggctaa ttgttgctca aaagccgttt catctcctaa
     1201 gttagcgata tattcaatgt tgcgttgggt ttgtaaagca aagagttgat gaatacgggg
     1261 ggatttactt tgagcaatcg ggttgcccca cacggcatat cggttcattt cggcttatcc
     1321 ttgtctaaaa atctgttggc tgaaaatatc tcgaatttcg gaagggtttt ctctacctag
     1381 cgtgtctgcg tgtaatacag gaaaatcttg accaaactga tcgatgactt cttttgcatt
     1441 gcggcaaggt ggttctccgc tcaaattggc actggtagag gtcaacgcaa cgccgcttgc
     1501 ctcacacaac tgaaccaccg ccggcacatt acataaacgt acggcaatag aatcaaattt
     1561 gccggtgagg taacttggca cagtattttt aaccggtacg atccaagtaa ttgcctgctc
     1621 gccaatatgg cttaggcgtt gccaagcctg ttccgtcatt cgagcttcat caatataggg
     1681 aagaagatac tttaaatcag aagccagtaa aattagccct ttttcctcag ggcgttgttt
     1741 taatacgagt aatttcctta ccgctttttc actttgtgga ttgcagccta agccaaaaac
     1801 cgcttcggtt gggtaagcta caacttcttc ttgctttaat tgattaacta tttctaaaaa
     1861 attattcatt cggttttaat tctgtttggt gctggcaact tttgttagca caaatggtga
     1921 attgcttgcc cttaattttt ttgattgtag cgagttcaca accacatttt tcacacaagt
     1981 ggttaatcgg tcgagttgct aatgtaaatt tgcaattagg gaagcctata caaccataaa
     2041 atattttgcc tgaacgccct tttctagcaa tcagtttatg ttgcttgcat tcagggcaat
     2101 caaactcttc ttcaacctca gcttcttcgt gtacgatgaa gtggcattca gggtaatggc
     2161 tacagccgat aaaaatacca taattgcctt gttttaattg gaggtttccg ccacattcag
     2221 ggcaaagttc atctaattgc ttaataatat gaccggcttg atgtaatggc ttaatataat
     2281 cacattcagg gtaagctgaa caacccaaaa ataacccttt tttgccctgc ttaatttgca
     2341 acggcgagcc acattgtggg caagtttcgg tctgtttggt tgatttgaaa agtaccatat
     2401 tgatttgcta aataagcgta aattcaatca caaaaaacgc attgtcattc ggataaatct
     2461 cccgaataac ttgtttcaat tcggctaagc tcatattttc ttgtttagcg tgttgctcgt
     2521 ttaattcatc aaacactata ggtgttaccg atagcacttt aatattggcg aaaaatctat
     2581 cggtttcatt agtaaaaacc gctaattctt ggtttggttg aaaataagat tctgacttgt
     2641 ctcgaatcgt aattgttttt ttaccgctta aaatatcggc ttcaaatcgg ctgaaaaagg
     2701 taattttctc tctattcata ttcatcgcta ctgtaatcca gagccattaa atgactaaaa
     2761 tgatcgttat aaaaaccacg gctaaccata aatcgccaca ttttctgctt tgctttcaga
     2821 tcccatacaa gcggtcgttt tttctcaaaa atttgctcag ctaattcaaa ccaatccact
     2881 tcggcgtttt ctaattcttg gttaattaac caatctttta cccctttaag ttttagctct
     2941 tgctttaaac ggcgaggccc aatgccttgc attgaacgat aacggataaa agtggtacaa
     3001 aagcgttcat cactttgcca ctgattcgct tgagcttttt caatcgctgc atcaatctcc
     3061 gtgagttcat actctttttg ctttagtttt tgccgaagct cttgctcgct gtaatcacgc
     3121 tttgaaagta aatatagcag ataattaacc gctgtgtatt tatttgtttt agtagtagat
     3181 gttgtcattt atcggttata aataaaaatg cgattttcac gttgagcgaa aaccgcataa
     3241 atttaattag agttcttctt cactaaattc atcatctgca ttgtctgcat tttcagaatc
     3301 tggagtagcc gtaaaagttg ggtttgaaat gagtagattt cgaatatctt gctcaatttt
     3361 actcgccact tcagggtgtt cttttaacca tttgatggca ttatttttac cctgaccgat
     3421 tttctcccct tcataagaga accaagcccc tgctttatta atgaagccgt gagattccgc
     3481 taaaatgagt aattcattca tacgggcaat gccctcaccg tacataatat caaattggac
     3541 ttcacggaac ggtggagcaa ccttgttttt cacaattttc acttttgttt cgctaccgat
     3601 aacctcatca ccgtctttta ctacgcctga acgacgaata tctaaacgta ctgaagcata
     3661 gaatttaagg gcattaccac cagttgtggt ttcagggtta ccgaacatta ctccaatttt
     3721 catacgaatt tggttaatga aaatcaccaa gcagttggtc gctttgatat ttgcggttaa
     3781 tttacgcaat gcttgtgaca ttaaacgagc ttgtaagccc atatgggaat cacccatatc
     3841 gccttcaatc tctgcttttg gtgtaagtgc cgcaacagag tccacaataa ttacatcaac
     3901 cgcaccggaa cgaactaacg catcacaaat ttctaatgct tgttcgccat tatccggttg
     3961 tgaaattaat aatccatctg tatctacccc taacttacgg gcgtaaatag gatcaagtgc
     4021 gtgttcggca tcaataaagg cacaagtttt accatttttt tgggcttgag ccaccacaga
     4081 taaagttaat gtagttttac ctgaagactc cggtccataa atttccacaa tacgacccat
     4141 tggtaaacca ccaatgccta atgctgagtc taaaccaaga gaaccggttg aaactgcttc
     4201 aatatcaagg gcttgagtat cgcctaactt cataattgag cctttgccaa attgcttttc
     4261 aatttgagct aatgcggctg ccaacgcttt ttctttttgt tccggatcaa tctgtttaac
     4321 cggagtgttc ttttgacttt ttttctctgc catattctat cctttgtaaa cttttatcta
     4381 aaagcaaccg cttgttgctg caaaataact gtatattatt atagtattta cttatccagt
     4441 tgcaagcatt tttttaggat tttcgatcaa gatcacaaaa ataaatttgc gagcaaggca
     4501 atgcccttgg ttcctcaaag ggattaagag cattaatcaa cataattttt tcatattgat
     4561 gcaaatcttg cttggctatt ttggctaaaa cgactttccc ttcatcaagc aatttactaa
     4621 gctgagtgcc tttgagcaaa taatgttgcg ggctatacca gattccttgt tttaggaaca
     4681 gtaaattgcc gatggagcaa tcactgacgt agccattatt gagaataatc acctcttcat
     4741 tttgtaaaat agggagcaaa tcaaaccgct tgcggtcgct aaatttgagg tgataatccc
     4801 aattttccac ctcaaccaag cgaaaacgtt ctactttttt gggcgaatag ataaaaaatt
     4861 tcagctcaaa ttctgttgcg ttgtaatcta ttcggcaacg tactttgccc cgttgagaag
     4921 cctctggcac aactaaaata tcagcaaggc taaaacgagg ttcacagcca aaatattctt
     4981 gtgttgcttg ctcaaaacgt tgttgatgat actgtaagtt ctgaactttg ccgtcaataa
     5041 tcgaaagggt ttcaaatagc ggaaatcggc acatagactt tctctaacag ttcattatat
     5101 tcatcagtta acacactttg tgaggtaatg ccaccaccac tatgaaacac aagcccgttt
     5161 gaggtttgag caatgtaacg aattgccacc gcactttcta agctctcgcc atcaaaataa
     5221 ccaaaaatac cggtgtagta accccgtttt cctaattctg cttgctgaat aatcgaaacc
     5281 gttttctctt tcggtgcacc gctaatggag ccggcaggta gtaattttgc caatatcgaa
     5341 ccgatatttt cttgccaatt ttcacctaat tcgccacaga tctcggaact tgtctgcaaa
     5401 attgcccctc gatgggtttc tactttttcc acataacggt atttagtaac ttcaatattt
     5461 ttcgccacca acgccaagtc atttcggatc aaatccacaa tggtattatg ttcggtaaac
     5521 tctttttccg aagccattaa tttctgctcg gcattctcct catttgcatt aattgtgcct
     5581 ttcatcgggt aggaaaaaat gcggttattt tcaattcgca caaagcattc aggggaaaaa
     5641 cagacgaacc tgccttgcaa ataacattta tattttgctt tgctggcggc aaaaatttcc
     5701 gccaatgaat aattggtttc aatggcagtc gggtagctca aattcagcaa gtagctattg
     5761 ccggcttgaa tttccttttt cactaattca aacccggttt ggtattcgct aaacggaatc
     5821 ggatttgccg ataattcaaa agctttagtc ggtttttcaa ccggcttttc gagattcgat
     5881 ttgcaaaaaa attcaaaaaa aagaccgctt gcgtgagcct gttctagcgg aaaaataagt
     5941 ggcttttgct gctcaaaatc aattaaaaag aaaaaagggc gttttgcttg cccgtagtga
     6001 ttggcttggt gaataaaatc ttgcatagaa aacacaatgg ctgaaattgg ctgaatcatc
     6061 aaaagctctg ttataatgca aagcaataga tttgaaaagc attttttaaa aaaggtttta
     6121 ccgatgaaca acaccattca ttttcaagaa attgggatct acatcgccct tgccgtttgt
     6181 gtgctggtag gcgtttatct ctttttcttg aaatcccgtt atcagcgaaa tgcctacgaa
     6241 ttaagccaag atcttggcaa aatcaccgaa aattttgaac aaattcagca aaaatatgag
     6301 gtgttggctc aagaaaaaaa tcagcttgag cagtgggcaa ttcaacaaca gaccaaatat
     6361 gaagcagtga gtgaacgttt aaacgagcga gatgggcaat tgcaacgatt ccaacaaaaa
     6421 atcgaacttg ccgaacagca agaaaaccag ctggaacgct atattaatga gctaaaagaa
     6481 cgtgtgggtt cttcccaagc aaaggcagaa agtttggaag aacagctaca atttagccaa
     6541 agttcactct caactaaaga gcgggaaaat caagcgttat ttagccgttt aaacgaggta
     6601 caaaacgagc tgaccgaact gcgtactacg ctttcggaaa aacaggcaaa ttttgaagca
     6661 caacaacgca attttattga ggtaaaacaa cagcttaatg tggaatttca acatttggca
     6721 caacaaattc ttgacgaaaa aagcaagcgt tttagcgaaa ccaatcaaag ctcgttagaa
     6781 gctctactga agccgttcaa agagcaaatt gaaggctttc aaaaacgggt gaatgaggta
     6841 catagtgagt cgctcaaagg ctcggcaaat ttagaggctg aaattaagcg ggtgctacaa
     6901 attggcgttt caatgtcgga agaggcacaa aatctggcaa cggcattaaa aggcaataat
     6961 aaaattgccg gcaactgggg tgaagtacag cttgaaagtg ccttacaatc tgccggttta
     7021 ctcgcaggcg agcattacca agcccaagag agttttcgtg atgaagaggg gcgacgtttt
     7081 gcccccgatt ttgtggtgca tttgccggat caaaaacatc tgattattga cagtaaagtc
     7141 tcgttagtag cgtacgatca agcggtcaga tcagaagaaa attttgcaat ttctcaagcc
     7201 ttagacgaac attgccgttc gctacgcaat catattgagg gattgtctaa gaagaactac
     7261 agtgcattat taggcattaa aagcccggat tttgtactga tgtttattcc gatagaaccg
     7321 gcttatattg aagcgatgaa gcacgatccg caactgttta actttggcta tgaacgcaat
     7381 gtgattttgg tttctcacac caccttaatg ccgattttac gcacggtcgc caatttatgg
     7441 cggattgaac gaggcaacag cgaggctcgt gaaatcagcg aaaaagccgg cgaaatttac
     7501 aaccaagtgt gtgcggttgc cgatcggtta gctaaattag gtaacacgct aaataccgca
     7561 aataatcaat acaatcaaac cgttacctcg ttagtgggac ggcaaggctt actgggcaaa
     7621 gtggaacgat tccaacatct ttcaagcaaa gcaagccaaa ttgtgccgca ggttgagctg
     7681 attgaaaatg aggtggatac tattaaattg gaaatggtat cgagagaatt attggaagaa
     7741 tagtcaaatc tctttattcc ctacaaaaat atggggtgat ttgaaatact aaagaaaata
     7801 ataaaatgct aaaaaaacta ttaatcatcg acaaccacga ctcttttacc ttcaacttgg
     7861 tggatttact ccgtaagctt gatgtgccgg cgaaagtggt gctggttgaa gagcttgacc
     7921 tcaatgaggt ggagcatttt agccatattt tgatttcgcc cggccctgat gtgccgagag
     7981 cctatctaca aacctttgcg atgttggagc gttatcatca aaccaaatca attctaggcg
     8041 tttgcttggg gcatcaaacg atttgcgagt tttttggcgg caagttgtat aacctaaacg
     8101 atgttagaca cgggcagcaa cgcacgctca ctcaaattga gcctaacccc atatttaaag
     8161 gtttgcctaa gcagttgaaa gttgggttgt atcactcttg gggcattttg caaaattcgt
     8221 tgcaaaatac accgcttgta ccaaccgcag tttgcgatca aaatgtgtta atggcgttta
     8281 aacaccaaca tttgccgatt tttggcgtgc agtttcaccc ggaatctttt atcactgaat
     8341 ttggtcaaca aatgttggca aattggcttg agattacaca agatttttag cgtgaaatcc
     8401 gctataatcc gtcagttatt taccctttta aaatctgtag gggcgaaaaa tttttcgcct
     8461 tacttaatat gcaagagata atttaaatga aagattcgat tatcaataaa ttagaaagtt
     8521 taagtgaacg ccacgaagaa ctacaggcgt tacttggcga tgcctcaatt atttccgatc
     8581 aagacaaatt ccgtgcttat tccaaagaat attcgcaatt agaagaagtg gttggcacct
     8641 ttaaccgctg gaaaaagctg aacaatgata ttgaagaggc tcaattatta ctcgatgatc
     8701 ctgatatgaa ggatatggca gcggaagaaa ttgcggaaaa taaagccgaa atcgagaatc
     8761 ttgagcaaca tttacaaatt ttattattgc cgaaagatcc gaatgatgaa tacaacgcct
     8821 tccttgaaat ccgtgccgga acgggcggtg acgaggctgg tatttttgcc ggtgatttat
     8881 accgtatgta cagccgttat tgcgaaagta aacgctggcg aattgaagaa atgtcggcaa
     8941 atgagagtga acaaggcgga tataaagaga tcatcgttaa aatttcaggc gaaggcgttt
     9001 acggtcagct taaatttgaa tcgggcggac accgtgtaca acgtgtaccg aaaaccgaat
     9061 cacaagggcg tattcacacc tctgcttgca cggtagcggt aatgccggag ttgccggaaa
     9121 gcgagatgcc ggaaatcaat ccatctgatc tgcgaattga cacctaccgc tcatcgggtg
     9181 caggcggtca gcacgttaat accaccgact ctgcagtgcg gattactcat atcccgaccg
     9241 ggattgtggt cgagtgtcaa gatgagcgtt cacagcacaa aaataaagcc aaagcgctgg
     9301 cagtgttagc ctctcggatt gtacaagttg agcaagaacg ccaagccgca gagcaagcgg
     9361 atacccgccg taacttactt ggctcaggcg accgttcgga taaaatccgc acctacaact
     9421 acccgcaagg gcgtgtgact gatcaccgta ttaacctcac ggtttatcgt ttagacgaag
     9481 tgatgaacgg caaaattgat gaattgatac aaccgattat cactgaatat caagcggatc
     9541 agttagcggc gttgtcggag caaaattaat tttattgtaa gggtacactg tgtgtgcctg
     9601 ccaaatataa atttgcaaaa ttttgactat ttttgatcgc ttgtagtttc taaaaagttt
     9661 aaaaatttga ggaaaacaaa atgagaaagt taggtttatt agcagtattt actttagtat
     9721 tatcagcctg ttcaaattca acaaaaattg aacaaaccat tctttccaag caggatatcg
     9781 taggctcttg ggtatgcgct attaaatacg atgatctaaa agtaagcact ttagattttt
     9841 ctgaatttaa agctaatggc gaaatgacga atttcggtga tatttctgat gagaattttg
     9901 agcccattaa atttacttat gtaacaggag ataaagggaa gtgggactta aaaggaaatc
     9961 gattagtgat tgattatgat ctttctgaac gtaaagtaaa aagaacaaca ccaaaaaaat
    10021 ttttagagtt cttgaaacag gaagagcgta aagcctcaaa aacagctaaa aaactcctta
    10081 aatatgaaca agggattttc aatattctga gtgatcagaa aaatactgaa aacagtaaaa
    10141 taatattaga tattttgaag tttggtcatt caagaatggc gattcagcaa aatatgggag
    10201 acaaagttta ttcaggtggt tgtgtaacag ctgataaagc agaagagtat ttagatatcc
    10261 taaaaaatag aaattctaaa taatggatta ccgagagtgg ctcacttttg ctgagcaaaa
    10321 attacttgaa aatagcgggg cagatccata cctaaacgca aaatttgatg caaatttgct
    10381 attgcaagca gtcacaaaac gttcaaaatc ggccattttt gctttttcgg aaaccctact
    10441 ttctgaaagc gagcttgcag aattagcgga aaaattagct cggcgtgcca aaggtgaacc
    10501 aatggcatat attttaggct atcgggaatt ttggtcgttg ccgttaaagg tttcaccggc
    10561 aacgctgatt cctcgccctg atacggaacg actggttgag ttggcgttgg aatatgctaa
    10621 caagcggtta ggaaatcaga aaatgttgca aattctggat ctcggtaccg gcacgggggc
    10681 gattgcgttg gcactggcga gtgaattagg cgagaaagcc caaattatcg gggtggattt
    10741 ccaaaatgag gcggtgcaac tggcagaaga aaatcgccga aacttaggct taaatcaagt
    10801 tacattttta caaagcgatt ggttcagttc gcttgcaaat caacaatttg atttaattgt
    10861 ctcaaatccg ccttatattg atgaatcgga cgaaaatttg acggtgggag acgtacgttt
    10921 tgaaccttta accgcattag ttgccgataa taaggggttg agcgatttgc aaaaaatcat
    10981 cgaaaatgca ccgcttcact taaaaccgca aggggcgtta atgctggaac acggctggaa
    11041 acaaggtaac ttggttcgag atttatttga tttacacttg tgggaacagg tagaaactgc
    11101 tcaagattat gccggcaatg accgagtaac caaagcgatt ttaaaataag gcagaaaatg
    11161 gacgatatta ttgaagaatt gttaaaagag ttggaagatc cgaaagtaac catcagcgaa
    11221 accgagctga aaaagtttct ttatcgtgaa attttacgat taactacgct cattgataag
    11281 aatgtaagtg agcaacaagt gtttggtcag atgtctgcgt tggtgaaaaa agctcgctat
    11341 aacgtgaatg gcgaaggcga tgaagagaga attaaccaat tacttcattt agtctatcgt
    11401 gaatggggct ttcattgcta ctatgaagac tatttccaca ccgaaaattt gttgctaaat
    11461 caagtaattc gcaaacggcg tggaatgccg gtttcacttg gggcggtggc gctttattta
    11521 tccgccgtat tggatttgcc gctttacccg gttaattttc cgactcagct tgtgttacgg
    11581 gctgaaatac accagccgaa cggggcaacc aaagtgcgtt ttatcaaccc gtggaacggt
    11641 gaatttctca ccatcgaaat gctgaataaa tggctggaag gagaaatggg ctttggcgta
    11701 gaagttaccc ctgatttgtt aagacgagca gaaccacaag agttgctgga aagggtcgaa
    11761 actgtgttta aaatggcact tacccgtgaa ggcaaatatg aagaaacctt acgcttgatt
    11821 gaataccgct tggcatttag cccggaagat ccgtacgaaa tcagagaccg aggaatggta
    11881 ctggcaagta tggattgcta ccaagcagca ttagaagata ttaattattt cattgaccaa
    11941 tgccctgaag atccttctgc cgaaatttta aaaatggaag tgaaaggact gcaacaaaaa
    12001 agccaagaaa gtgtggtgca ttaagctgag aagtagcccc aaaggggctg agctatgatt
    12061 aacctagtac ggctctgccg tgctaggcag aaaataagaa acaaggactc cctatgacag
    12121 ataaaattgt aaaagttggc aatattgaag tggctaatca caaaccgttt acgctttttg
    12181 gtggtatgaa tgtgctggaa agccgtgata tggcacttag agtatgtgag caatatgttg
    12241 aagtcacgca aaaactaaat gtgccttatg tgttcaaagc ctcatttgac aaagcaaacc
    12301 gttcttcaat ccactcttac cgtggaccgg gaatggaaga aggcttaaag attttccaag
    12361 aattaaaaca aacctttggc gtgaacatca ttaccgatgt tcacgaaatt taccaatgta
    12421 aacctgtggc agaagtagtt gatgtgattc aactaccagc atttttggct cgccaaaccg
    12481 atttagtgga agcaatggct cgtaccggtg cggttattaa cgttaaaaag ccgcaatttt
    12541 taagcccggg tcaaatgggg aatatcgtag aaaagattgc tgaatgcggc aacgatcaag
    12601 tgattttgtg cgaccgtggc actaactttg gctacgataa tctagttgtg gatatgcttg
    12661 gtttcggcat tatgaaaaaa gtgtcgaaag gttgcccggt gatttttgat gtgactcact
    12721 cattacaatg ccgtgatcca ttcggtgcgg cttccggtgg tcgcagagat caagtaaccg
    12781 aactggcacg ctccggtatg gcgattggtt tagccggctt gttcttagaa gctcacccgg
    12841 atccaaactc ggcgaaatgt gatggtccat ctgcattacc gctgtcaaaa ttagaagcct
    12901 ttgtttcaca gatgaaagcg attgatgagt tggttaagag ctttgaagaa attgatactt
    12961 ccaaataaac tttctccgca ttaaatcctt tcctactttc tttgcttcgc caaagaaagt
    13021 aggcaaagaa aggcgaccct acttcgctac ttttcttcgc ttagtgtgaa tgggcttaac
    13081 gaaaaattta cattcgcttc gctcagagta aattttccta cccattaaaa cacgctcagg
    13141 tagctcagaa gggagttaga aaggtaaaag acagaatagg agaaaaaaat gctaaatatt
    13201 gtttttcttg accgtaccgg tattcctgcc actcacgata ttcctcgtcc gaattttcca
    13261 catacttgga cggaatatgc caccacctct gccgatcaaa cttttgagcg ggtaaaagaa
    13321 gcggatatta tcattaccag caaagtgtta ctccagcgtg acttgctggc taaattacca
    13381 aagctgaaat taattgcgat cacagcaacc ggcacgaaca atgtggactt agcggcagca
    13441 aaagagttag ggattgcagt gaaaaatgta accggctatt ccagcgttac cgtgccggaa
    13501 cacgtcattg gtatgattta ctccctgaaa catcgtttag ccgattatca ccgtgattta
    13561 attacgtctg accgctgggc aacttgcggc caattttgct atgtagatta cccgatccac
    13621 gatgtgcgag gctcaacctt aggcattttc ggtaaaggga acatcggggc tgaagtggca
    13681 cggctggcac aagcggtcgg aatgcaggtt atttttgcag aacatcaagg cgcaactgaa
    13741 attcgagaag gctacaccgc ctttgaagag gtattcaaac aagcagatat tatttcacta
    13801 cactgccctt taaccgagca gactcaaaac ctgattaatg cagaaacctt agccttaatg
    13861 aagccgaccg cttatattat caatacgggt cgaggcccac tgattgatga acaggcattg
    13921 cttgaggcat tagagcaagg caagattgcc ggcgctgcgt tagatgtttt agtgaaagag
    13981 ccgcctgaaa aagacaaccc tttaatgtta gccgcaaaac gtttaccgaa tttactgatt
    14041 accccacacg ttgcgtgggc aagcgattct gcggttacaa cactagtgaa taaagtgaca
    14101 caaaatatgg aagagtttgt agcaacgggt atgtagcttg aagtaggggc tggtcctgtg
    14161 ccagccctaa tattaataga atgagagggc gggtataaaa cccgccccta ccaatatcat
    14221 tttagaaaaa cagatgaatt taaccccttt ttttattgct tttcgctatt ttagatcgaa
    14281 aagtgctgac cgtttcgggc ggttagtcac caatcttgcc agccttggca ttgtgctggg
    14341 cgtaatggca ttggtgattg tgctgtcggt tatgaacggt ttggaaaata tgcagaaaac
    14401 caatctgcta tccaccttgc cgcacgctat catcacccct caagaggggc attttgccaa
    14461 aggtgaaaaa ctggctctac ctgaatttgc caagcaaagt gtggtgatta accgtgcgaa
    14521 tgtgattatc caaagttcac aaggcattaa cgccggtcag ttaatcggcg tggaaaatgc
    14581 cacagacgat ccgttgttag tggcggaaaa tatccccgca ttattgccta gcggtgaatt
    14641 taaggtagta attggctctc gtttagccaa taaattgaac gttacggtag gcgataagct
    14701 ccgcttaatg atcactgaaa acagccaata tacgccactt gggcgagtgc cggtacagcg
    14761 tttgtttgaa atttcgggcg tttatcaatc taatcgtgaa gcgagcgaat ttaccctctt
    14821 tgctaattta gctgatgtcg ggcgtttgct tcgcatcagc gaagatcaag tacaaggcgt
    14881 gcgtttatat ttgcaagatc ctttccaagt taccgaactt agccaatatt tcgatgcaga
    14941 acgctaccaa atcagtgatt ggcgtgagca aaaaggcgaa tttttccaag cggtgaaaat
    15001 ggaaaaaaat atgatgggct tactcatcag cctgattatt gtggttgcaa tttccaacat
    15061 tgtgacttca ctcagtttga tggtggtaga caaacagggc gaaattgcaa ttttacaaac
    15121 ccaaggctta accaaaaaac aagtgatgca gatttttgtg ttccaagggg cgattgtcgg
    15181 agtaattggc tcgattattg gtggtttgct cggcgtattg atcgcctaca atttagatca
    15241 gattatcctg ctattaaacc cgagcatcca tctgcctacc ctaatttcag gcacgcaaat
    15301 tgcggtcatt gtaggggtgt cgatgttgct ttcactcctt tgcacgcttt acccggcata
    15361 ccgagcctca aaaattgagc cggcacaggc attgagatat gaataataag aacggaaata
    15421 aaatgacaga attacttcgc tgtgaacata tcagcaaatt ttacgatgag ggcgaacaga
    15481 aagttcaggt gctaaaagag gtgtcatttt cgatgaacga aggtgagctg gtagcgattg
    15541 tcggtagttc aggttccggc aaaagcaccc tattgcacac attaggcggg ctagatcagc
    15601 caagcaccgg tgaagtctgg attcgagggc aatctctgca acagctcagt tcagacaaat
    15661 tagcgttatt gcgtaaccaa aacttaggct ttgtgtacca atttcatcac ttaatggcag
    15721 actttaccgc ccttgaaaat gtgatgatgc cgatgctgat cggcaaacag aacaaaactg
    15781 aagctgccaa tcgtgccgag aaaatgctac aagcggtcgg attagctcat cgaatgacac
    15841 atcgcccatc agcactttca ggcggcgaac gccaacgggt ggcgattgcc cgagcgttgg
    15901 ttaataatcc ggctctggta cttgccgatg aaccgaccgg taatttagac caaaaaacca
    15961 ctgaaagcat ttttgagctg attcaacagc tcaaccaaga gcagaacatt gcgtttttat
    16021 tagtaacgca tgatttaaat ctagcgaata aactttcacg tagtcttgta atgcgagatg
    16081 gcgtgttaag cgaggggagc ttatgagtac gccgtttttc attagctggc gttaccaacg
    16141 gggcaaacag aaaaacaaac tggtttcact gattgctctc ttttccaaca tcggtattgc
    16201 ccttggggtt gcggtattaa ttatcgggct aagtgcaatg aacggctttg agcgagagct
    16261 gaataatcgt gtgctttcgg ttgtgccaca cgctgaactg gtttcgtttc aaggcaatca
    16321 gcctcaacca atttttgata gcaaaaaatt agaggcattg ataaaaaaat cgcaaaatgt
    16381 gaccgctagt tcgccttttg tcagctttac cgccttaatt gaaaatgggg ctcagcttaa
    16441 aatcgcccag gtgcgagggg ttgatcctaa aaagcaagat caggccagcc aattaagcca
    16501 atttattcca cccgagcaat ggcaagcgtt caatcagcaa tttcaagccg atgaagatgg
    16561 cttgatttta ggagccggta ttgccaaagc gttagaagtt gaggcaggag acgaagttac
    16621 gcttttaatt cctcagccaa cagaagacgg caaattagcc cagcccttgc gttttaacct
    16681 aaacgtaacc ggcattttgc ggctagatgg gcagctggat cacagttatg ccttaattcc
    16741 actgaataaa gctcaagagc tgatggaata ccaagcgaat gaagtgtcag ggcttgaaat
    16801 cagccttgcc aatccgtttg atgtacaaca gcttgaaatg ccacaactta acggctatac
    16861 ccaaccgctt tatttgaata cgtggattga taaattcggt tatatgtata acgatattca
    16921 actgattcgc accgtgatgt acattgcaat ggttctcgtg attggcgttg cctgttttaa
    16981 tattatttcc accttgatta tggcagtgaa agacaaacaa ggcgatatcg cgattttacg
    17041 gacactgggg gcaaataacg gttttatccg ccgcattttc ttatggtatg gcttaatttc
    17101 aggtatgaaa ggggcgttat tcgggctgat tttaggtgta attttatcgc taaatttaac
    17161 cgctattatc aaagcgattg aagcattctt tgaggtgaaa ttgctttcag acggggttta
    17221 ttttgttgat ttcttaccaa gtgaattaca ttggcaagat gtcgtctatg tattggcagc
    17281 cacgattatc ctaagccttt ttgccagctt ataccctgcc aaccgagccg ctaaattaga
    17341 accggcaaaa gtgttaagtg ggcattaatc attttcctat tctaataaaa aagcagctac
    17401 ccctcgatta tgtcagaaag gtagctgctt ttatttatgt tattactctt cgcctaataa
    17461 tttcaactca cgagccttaa tttggttttt tagaatttca actaagtctg aaacgaggta
    17521 agtacctaag tctgcacctt tacgggtacg cacagacact ttaccttcgg cgatttcttt
    17581 atcaccgcaa accaacatat aaggcacacg gcgtaaggtg tgctcacgca ctttgaagcc
    17641 gactttttcg ttgcgtaagt ctgctttcac acgaatgcct gcatcagaaa gctgtttcac
    17701 cacttgttgc acataatctg cttggctgtc ggtaatgttc attaccactg cttgggttgg
    17761 ggcaagccaa gttgggaaga aaccggcata ttcttcggtg ataatcccga tgaaacgttc
    17821 gatcgagcct aaaatcgcac ggtgaatcat taccggtgtg cggcgaccat tatcttctgc
    17881 tacataagag gctgctaaac gacccggtag agcgaagtca agttgcactg tgccacattg
    17941 ccattcacgt cctaagcaat cacgcaatgc aaactcaatt ttcggcccgt agaatgcacc
    18001 ttcgccttct tgaatttcat attcaagtcc gttgttgcgt aaggcgttgg ctaagccttt
    18061 ttctgctctg tcccacattg catcatcacc gatacggttt tccggacggg ttgaaagttt
    18121 tactgcaatg ttagtaaaac cgaaggtgct gtaaatgtcg tacaccattt tgatacagct
    18181 gattacttct gactcgattt gttcttcagt acagaaaata tgggcatcat cttgggtaaa
    18241 accacgcaca cgcattaagc cgtgtaatga accggacggc tcgttacggt gacacgaacc
    18301 aaattccgcc atacggatcg gtaaatcacg gtaagatttc aagccttgat taaagatttg
    18361 aacgtgaccc gggcagttca tcggcttaat tgcatattca cggttttccg attgggtagt
    18421 gaacattaaa tctgcgtagt tttgccagtg tccggttttt tcccaaagca cacgatccat
    18481 cataaacgga ccttttactt cttggtaatc gtactctttc aatttggtac gcacaaaagt
    18541 ttcaagttca cggaaaatcg tccagccgtc attgtgccag aacaccatac ccggtgcttc
    18601 ttcttgcata tggtataaat ctaacgcttt accgatacgg cggtggtcac gttttgccgc
    18661 ttcttccaaa cgttgtaaat attcggctaa ttgtttttta tcagcccaag ctgtaccgta
    18721 aatacgttgt agcattttat ttttgctgtc gccacgccag taagcacccg ctactttttg
    18781 taatttgaag tggtggcaga aacgcatatt tggtacgtgt ggaccacggc acatatcaat
    18841 atattcttcg tggtgatata acgcaggcgt tgccgtacgt tcaatatttt catctaaaat
    18901 cgccattttg tatggctcac cacgtttctc aaaggtatct cgagcttctt gccagcttac
    18961 cgggcgtttt accacgtcat agttggtttt tgccagctct aacatacgct tttcaagagc
    19021 gtctaaatct tcttgagtca aagagcggtc taaatcgata tcgtagtaga aaccgttttc
    19081 gatagtcggg ccgatagcca ttttaacgtc tgggaataat tgcttgatgg agtgacctaa
    19141 caagtgagcg gttgagtggc gaatgatctc taaaccatct tcgtctttgg cagtaatgat
    19201 ttcaagtgtg ctgtcttggc tgatgatatc agacgcatca cggcgttcac cgtttacacg
    19261 accggcaatg gtggctttcg ctaaacctgc cccgatagat tgggcaactt ccattacaga
    19321 aactgggttg tcaaatgaac gttgtgaacc gtccggtaaa gtaataattg gcataataaa
    19381 tccttacagt ggtaatccat acgagagatt acttgtgttg tttgaatgaa aaaaccgcct
    19441 acaagcggtc ttttttgatt aaaattttgc aatttgctta ttatttccct tacaagtggg
    19501 gaataaaagc actgaaattc tagcataaaa caaagaaaaa ttaaactttg ctgttttcag
    19561 cggccccttc atcaagctca atattttcat tttctgtttg tggatcttgt tcaagtattt
    19621 caagctgagc ctggtactct tgtaccgctt cttcatcaaa tggaataagt gcgtcctcaa
    19681 caacttcaat ttcttcaagt gggcttgcgg ttgcaattgg ggtagcatat tgcatctctg
    19741 ctcgttccgc tttcggaatt gatttggtgc ggaaagcaca aataaataaa ctaagtgaga
    19801 acagtccaaa aagtgcataa aagccatatt cagcggaaag gctcatcgca aaaccgataa
    19861 gcggtggagc aactaacgcc cccacaccat agcaaaacag taaacccctg cttacttcaa
    19921 ccgtgttcat attattcggc aattcatcgt tggcacgggc aatgctcaaa gcatataagc
    19981 taaacagact acagccaaag aaaaaggcga taatatactg tccccaggcg gtcaaatttt
    20041 cttggaaaat tgcaaataat ccggcaagtg cggttaaagt ggcaatcact gaacaagcta
    20101 aaatggcgtt acgtctgcca atacgattcg ataatatcgc catcggcatt tggctgataa
    20161 aaccaccgat catcgagatc atcaaataaa gcgagatttc acttaatgaa aagctaaact
    20221 tcagcagaaa gactgacgcc attgtaaaaa agccgtttac caacattccg ctaataaagc
    20281 tggttgctaa ggctaacggt gaaatcgcaa atagtttagg aatactaatg cgctctcgag
    20341 ccggaatatc aggctgaacc attttagtta aagcaattgg gatcatcgac atcacaacca
    20401 aaatggtaga taagataaaa atgtttcggc tactaagttc taaacttaat aaacttacgc
    20461 ctaaaataaa ggcgagatag aagataatgt tataagtggc aagcactttg cctctggtat
    20521 cgacattggt tttttcgctt aaccaacttt cgactaaaag cagcaagcta taatgacaga
    20581 atcccaaaat aattcgtaac acgccccaga tccacaaagt atcaatcata atatgaccga
    20641 gagcggcgat agcaaaaaca gcacagaaaa cgctaaatga acggatatgc ccaacacttg
    20701 atacaatgcg gtgagcaaaa atagtgctta atgccgcccc aataaagaaa gcagcgttaa
    20761 gtaaaccgat gatgatgtcc gttatcccca tttctgccag tttgatccct gctgaattta
    20821 gaaataaacc gtagccgaaa aacagaaaaa agatacctga ataaagggag taaaatttag
    20881 tgctattcat caatgctcct tcaaacattc tgccagtatt aaatcattgt accgatttaa
    20941 taccttttag gcaaaaaagt tattattagc gttgagaaaa taacttttgg ctattttgat
    21001 taaaaaatca aatgaaggtg attttgaaat gtagtaaaaa atagagcaat cagaattgaa
    21061 aaagggtttg ccgtaacaaa gcctttagaa agattagagt ttcgagaaga atttgtagct
    21121 tgggctaacc aaaacacttg ctaggagtgc tttaagcaca ccacctaaaa taaatggata
    21181 taagcccgct tgtaatactg tgccttctgg tacaaagaaa gttgagccaa gccgaaagca
    21241 aaggtgatca cacttgcaat taaggcgaca aataaacttt tccaaaaaga gtttaatacg
    21301 cctttatcgc tataatagcc taagaaatag gcggttggaa tatagcctaa taagtatccg
    21361 cctgttggac caaagaaatg atggaaacct gaagcaccgc cggcaaagac aggtaaacca
    21421 atcgcccctt caaaaagata aagtaatact gcagcagttg cggctttacg acccattgca
    21481 aaaccaacca cagttaaagc aagtgtttgc cctgtaatgg gtacagggta catcggcaca
    21541 gaaatttgtg caaaaatagc aagcagtgtt gctccaataa aagttttcaa ccaaaatgta
    21601 gttatactat tggcttctag ccaacgttta gtttgaatta attgcgtagt gaacataatc
    21661 ctctccttta atatggttaa aatgttctca accgattata taagaagatg tcttttaggg
    21721 taagagtgaa tttaaaatgg taaaaccagt ttatatttat tgtgatgaag gtagcagtga
    21781 aattggtgtt caatcactgt tattggcagt aaaacagcat ttacagcgtc cggcttatct
    21841 catcaatgcc aaacaaatta ttcaaagcaa gttttccgat ggctgtttat taatcatgcc
    21901 cggtggagcc gatttacctt actgcaaaaa attaaacgga gaaggcaatc gtagaatccg
    21961 ccaatttatt gaacaaggtg gagcttatct cggtatctgt gccggagctt attatggctg
    22021 tgctgaattg aattttgtag ggcgtgacta tagcgtaaat ggtaatcgag aactagcttt
    22081 atttaatggc attgcgggca ttgcgaaagg cagtctgccg cagtttacca acgggcaact
    22141 ttacgataaa aacattggta gcaaagcgat agttgaagta acacttgcag agggtggaaa
    22201 aatgccgttt tattatcacg gtggttgctg ttttgaacca aattcaacaa cagtgattta
    22261 caacccgttg gcttattatc ctgatggctc agtagcaatg atagagggag agctagggcg
    22321 aggttactat ctgttgtcgg gtgtacattt tgaattacaa gcggtcgttt attggcaaaa
    22381 aattgtaaat tgctgtgaaa atcttgacat aaaaacacaa gaagaagcaa tttgctctaa
    22441 ttttaatgta aattatggct cgcaaatttg gcaacatcta aagcaacgac taaatcaagc
    22501 gtaaaaaaat aacctttcgc tattctgcca aatggtttct gcaatcagat ttggtgattc
    22561 tgttcttaat tcacatagac tattgaaagt cactaaaagc cgttccggtc ggttcggctg
    22621 gccttgaaag ccaaacaccg gcatatcggg cgagtcggtt tccagtagta aactttcaag
    22681 aggtagtttg cggatagcct cacgggtttt gttagcacgt tcataggtaa tagttccccc
    22741 cacaccaatt ttataaccga gatcgacaaa acgttttgcc tgttcatagc tgccggcaaa
    22801 gccgtgaacc acaccggttt tggttagttg ggcttttttg aggaacacaa aaagttgatc
    22861 gtggctttta cgtgaatgaa gattaacggg taaattaaat tttttcgcaa gggaaagttg
    22921 tgcctctaaa aattcacatt gctttttcca taattcaggg gtagaaactt cacttaccgc
    22981 tttttccaaa ccgatttcgg caatagcggt acactgtgga tcttgttggc ttagcaaatt
    23041 ttccaataag attaaatctt gttgttggtg ctgttgaata tacagtggat gcaaccctaa
    23101 tccatacacc aaattttccg gtttttgttt ggcacaagcg gtcacttttg caaaattttt
    23161 tgcaaatacg gcaacgataa gaatgcattc aacctgatgc tgtttggcat tctcaaccaa
    23221 ttccggaatg cttaaattca ggctttctgc gagatagtcg aggtgagtat gagtgtcaaa
    23281 aaatcgcata ataaaaccaa taaaaacggg gactagattg tccccatttt tagcatttta
    23341 cgcaagcaat tagtttgtta cataagcatc ttcatcacga gcctcagatg gcttgaggaa
    23401 agcaaagaag caaataacac aaactaccgt aatcgcaaaa ccgatataaa ctgataattc
    23461 ataatctaaa ccgaagccga ttttgttgtt cgcaaggtaa gttgcacaca cggtagtgat
    23521 aaaccatgca ggaatcgagc atacccagtg gaatttttta tagcggtata agtaacctgc
    23581 ggcagtccat aacataacca ttgcagtcat ttggtttgcc caagtgaagt aacgccataa
    23641 tacgctgaaa tcaacttttg agacaatgaa accaagtacg aataatggta cggcaatata
    23701 caaacgtttt actaaggtac gttgttctaa accaaagatt tccgctagtt gtaaacgagc
    23761 ggctcggaat gcagtgtcac ctgaggtgat tggtaatact acaacgccta atacggcaaa
    23821 aataccaccg ataaacccta agaagtgtaa cgagctgtca tataccactt tagacggtga
    23881 accggcagag atcgcatctt gtaaggcttg tgggttttca tagaatgaaa gacctactgc
    23941 acaccatact aatgcaatta ccccttcagt aatcattgca ccgtagaaaa taaaacgacc
    24001 ttctttctca ttttgcgcac agcgagccat taatggggtt tgggttgcgt ggaaaccgga
    24061 taatgctccg caagaaatag ttaagaatag taatggccaa attggaacat cacctttcac
    24121 ttggaagttt tgggtgaatt tttcccacgt taagccttga ccgtctgcat tcactgtacg
    24181 gaagaagtcg ataggatcag tcgcacttaa gtgagcgctg actagaccat ataccatacc
    24241 tacagacata aagagtaata atgctccgaa gaaaggataa attcgaccga tgattttatc
    24301 aacaggtagt aatgtagcaa gaatatagta agcaaaaatg attaacgtcc acacagaaat
    24361 cacggttgct ttatccatac cccaaacggt tacgccacct gatgctacag attctttaat
    24421 tgcttcaaca tcacctaatt ccattgcact ttgggttgca cctgcaatat ccatggtgat
    24481 ggtagagagt aactgagcag ggcttgcaac gaaaactacg cctactaata aaagcaagat
    24541 gagcgccatt acgttgatga ataacttgac tggacgaccc aagaatttcc ctgccagatt
    24601 tggcatcgtt gcgccaccgt tgcggatact taacatacca cagaagtagt cgtgtactgc
    24661 accggcaaaa atacaaccaa tcacaatcca aagcattgca actggtccgt ataaggcacc
    24721 aagtattggt ccaaaaatag ggccggtacc ggcaatgttt aataattgaa tcagccaaat
    24781 cttggtttta gacattggca tatagtcaac accgtcgttc attgcataag ccggcgttgc
    24841 tcttttcggg ttaatcacga agattttttc aatgattttt ccgtaagtaa agtagccaag
    24901 aacaagcacg gctacacaga aaaagaacca caacatagta gaaatcctat aaattgagat
    24961 aaatgatcat ttttagcaga actgataaag gcgtgccatt gtaagtgagg agtgaggata
    25021 aagtaaaatg aattgttaga tttgtgtgaa taatttactg aaaatgtgag gttcatcaaa
    25081 aaatcccttt gttctgcgtc aatcaaaggg actttttaaa gttaaatatc gaatttttga
    25141 attttcgctt caatgccttg ggcatctaat ccaagatcgg cataagcttc agcttgagta
    25201 gattggggaa cgaaaaagtc aggaatacca agcattacaa gcggtttgat tttgccgata
    25261 ttttgcaaat attcattcac aaaactacct gcgccacctt gaatagcatt ttcttcaagc
    25321 gtaactaaca actcgtgtga atccgccact ttttgaagta atgcttcatc taatggttta
    25381 atgaaacgca tatctaccaa cgtgtagtta tgtttttcag ccacaatctt tgcttcatca
    25441 agcaaagcac caaaatttaa aatcgcaact tttttacctt cacgaataat gtttccttta
    25501 cctacttcaa gtctttgcat tggctcaagt tttacccctt tagcattgcc tcgagggtaa
    25561 cgaatagcac ttggcgtatt catcgtgtaa gcggtataaa gcatttttcg catttcattt
    25621 tcatcgctcg gtgccataat ggtcatattg ggaatacaac gcataaaact taaatcaaat
    25681 gcaccttggt gagtttgccc gtcagcgccg acaattccgg ctcggtcaat cgcaaaaatc
    25741 accggcaggt tttgaatagc aacatcgtga attaattggt cataagctcg ctgcaagaag
    25801 ctggaataaa ttgcgactac cggtttgtaa cctgcgattg ctaagcctgc cccgaaagtc
    25861 actgcgtgtt gttcggcaat cgccacatca aaatattgtt cagggaaacg tttggaaaat
    25921 tctaccattc ccgagccttc acgcattgcc ggcgtaatgc cgataatttt cggatcacgc
    25981 tctgccattt cacatagcca atcgccaaaa atattggaat aagtaggtgc tgcttttgat
    26041 tttggtaact cggctgcggt agggtcaaat ttcggaacgc catggtagcc aatcggatca
    26101 ttttccgcag gtgtgtagcc tttgcctttt ttcgtgcgaa tatgcagaaa ttgagggcct
    26161 ttcagctcac gcatattgct caaggttttg actaactcgt caatattatg tccatcaatc
    26221 gggccgatat aattaaagcc taactcttca aacaaagtgc tttcagggga gaaaatcacc
    26281 cctttcatat gctcttcgct ttttttcata aagtttttga tggtaggcac tttatctaaa
    26341 attttcttac tgccgtcacg cactgaagta tagagcgaac cagaaaaaat gcgggcaagg
    26401 tggttgttta atgccccgac attttcagag attgacattt cattatcatt taagataacc
    26461 aacatatcgg tatgcaatgc acctgcgtgg tttaatgctt caaatgccat tccggcagtg
    26521 attgcaccat caccgattac acagacggtt ttacggccgg cattttcttt ttctgctgcc
    26581 accgcaatgc caagtccggc actgatcgaa gtagaagaat gcccaacgct taacacatcg
    26641 taagggcttt cttcacgcca agggaagggg tgaataccat ctttttggcg gatagtgtgc
    26701 atttgatctc ggcgcccagt aaggatttta tgtgggtaag cttgatgacc aacgtcccaa
    26761 attaattggt cgaaaggcgt ttgataaaca taatgcaaag ctaccgtaag ctctactacc
    26821 cctaagccag aggctaaatg tccgctagtt tgactgactg attccaataa ataggctcgc
    26881 agttcatcaa ctacggtttg aagctggtct ttagaaagta aacgtaaatc ttccggtgag
    26941 ttgatttcgc ttaacagagg atacttcttt tccataatgt tttattaccc acaaccatca
    27001 aataatagat gatattaaat taagctttga gttcttcggt caaagtaggc tgaatgctat
    27061 ttaaaatttc tttaaccaca cggccgttac caacaaccag attacctgtt ttcaagtaat
    27121 ctgttccgcc aacaaagtta gtcacaattg caccggcttc acgggcaata agttcaccgg
    27181 cggcgaaatc ccacggtttt aagccgattt caaagaaacc atcaacacga cccgctgcaa
    27241 cataggcaag atctaaagcg gcagaaccgg tacggcggaa atcagctact ccgttattca
    27301 ttaagccttc aagcatattt aaatgtgcat cacgatgtct gatgactttg aaaggaaaac
    27361 cggttgcaat tacagtgcct tttaaatcac ggcgttctgc atcaatgcgt aaacggaact
    27421 cgtttaattt agccccttcg ccacgcaccg cagtgaaaag ctcgttacgg ataggatcgt
    27481 aaactacccc tactgttgta cgtccgtttt cacgcacggc aatcgacaca gcaaaatgag
    27541 gtaagcgttt tacgaaattg gttgtaccat ctaatggatc gatcacccat tgtacatttt
    27601 cattgctacc gtttaacacg ccggactctt cggtcacgat cgagtgttca gggtaagatt
    27661 tacggatcac atcaataatt gccgcttccg ctgctttatc gatttcagtc acataatcat
    27721 tcgtattttt ttgtaaaact tgtgtatctt gaggcgattg ttcatagcct ttggcaataa
    27781 tattgcctgc ttttcgtgcc gcacgaatag caatgtttaa cattgggttc atatttccac
    27841 cagattttaa agaacataat aaagcacgaa ttataaagaa tgtagcgaaa taaagaaaca
    27901 acaagcggtc taatctgtga aaaattttgc aaaaaaatgg ctttttctaa ccgcttggag
    27961 tttggattcg ttataatacc tcccattcaa gccacccatt taggtactaa aaatgcaatt
    28021 taaagaaaat aaccaacctc gttttaaaca cagagaagaa cgccgttcag atgagtgttc
    28081 cccccgtttt tcagataaag gcaaaatgcg aggaaatgaa ggtaaaagtg acagaccgca
    28141 taagctacat tttaagcgtg acgaggctta ttcacgctct gagcagattt atccagcaga
    28201 aggcaaaaaa gccagtggtg aaggtagtgt gcaaatttgg gtaaaaggtg ggaatagctc
    28261 agttaaagag aaaaaaaacg gcccgctttc accgagagcg cctgagaaaa ttaagaaaaa
    28321 tcgcttggaa gagatgaaag tctatggcga aaatgcctgt atcagtttgt tccaacaacg
    28381 tcctgaatct attgtacgtt tatgggcaac agtggagggg gcaaaaaaat taggcgattt
    28441 aatgagctat ttggctcagc acaaaaaagc ctatcacgtt attgaccgtg aagagatgga
    28501 gcgagtcacc ggtactgaac atcacggcga tatgtgctta ttggtgaaaa aaacggcttc
    28561 atttgtgcta gagggctatt tacaagtgcc gaaaaaacaa gattgcttgg tactgttaga
    28621 tggtgtaaac aatgctcaga atgtgggggg aatcatcaga acgtgtgctt tttatggtgt
    28681 gaaaggcatt attactgaaa atgtggatag cttaaactcc agtgctgcag ctcgtgtcgc
    28741 agagggtggt ttggaatttg tgcgagcgtt agaaactaaa aacaagcata ttgctttggt
    28801 acaactccgc caagccggtt atcaaattgt ccacctcaca cgccataagc aagccccttc
    28861 tttaaccaaa attaagctgg cggaaaaggt ggtttttgta ttaagtgaga ttcctgcaag
    28921 tgatgtggct tacgcagaag acacaacaat acagctttcc tttaataatc cgttaaatag
    28981 tggtttaaat gtggcggtaa acgcaggtat tctacttaat caatggtatc aaacccacat
    29041 tctttaagga attgaaatga atcagcaaaa accgtttgaa gtgattgcga ttgttggcac
    29101 acctcgccac gacagtgcat ttgaaacaca tcttgccgtt tataattggt taaaagatcg
    29161 tgattatcaa attttagtgg aaacagaggt tgccactcag ttacagctta aggaaagcta
    29221 cagtttagat cagattgggc agcgcgcaga gttggtgatt gtgataggtg gcgatggtaa
    29281 tatgcttggc atcgcccgag ctttggctaa ataccgagtg ccactgatag gcattaaccg
    29341 tggcaatctg ggttttttaa ccgatatcgc acctcaaacg gcttttgaac agctttatag
    29401 ttgcttagtc aaaaatgagt atgtgattga agagcgattc ctgttagagg ctttcattga
    29461 gcgcaacggt aaaattattg ccgcaaataa tgccttgaat gaaattgtgg ttcacccaac
    29521 ccaagtggct cgaattattg aatttgaagt ttatattgac ggaaaattcg ctttttcaca
    29581 acgtgcagat ggcttgattg tggcaacgcc tacaggctca accgcctatt cactttctgc
    29641 tggtggcccg attttaaccc cgaatatgaa tgcaatggca ttagtgccga tgcaccctca
    29701 cactctttct tctcgtcctt tggtggttga tggcgatagt caaatttcgc ttcgttttgc
    29761 caaatataat acccctgatt tagaagtgat ttgtgacggg caggtgaata tgcactttac
    29821 gcctgaagat agagtcttgg tgcgtaaaag cccggataaa ttacagctgc tccatttaaa
    29881 agattatagc tactttactg tattaggttc taaattaggc tgggcaagta agttgtttta
    29941 aacacaagcg gtgttttttc tgattaaatt tgcaaatgca atatgaattg atttcatata
    30001 catttcaaaa atatatcatt tttattcaat aaaaatttgt ggttcaataa gctatctgaa
    30061 aaataaaggg gacaataaaa tgacaacaaa ttttaaatgc caagtgcata ctattgaatt
    30121 taatgaagat taccaaccgg agcaaagcac ccgtttaacc accaactttg ccaaccttgc
    30181 ccgtggcgaa aaccgcaaac agaacctgca aaatgcgatt gcgatgatca ataaccgttt
    30241 taacgattta gcgaactggg ataacccgaa tgcggatcgt tattcggtga aattggatat
    30301 tgtctcactg gatattgatg tggaaggcaa aggcgagttt ttccctgcga ttgagtggct
    30361 gaaaacctat gttatcgact acaaaaccgg caaaaccatt gatggcatta tcggtaataa
    30421 cttctcttct tttgtgcgtg attacgattt cagcgtattg ttgttagatc acaataaaga
    30481 caaaccgcaa tttagcgtgc cggaaggcta tggcgagtta cacggcaagc tgtttaagca
    30541 tttattggca tcgcctgaat ataccgcaaa atataaaaaa ccaccggtga tctgtttaag
    30601 cgtggcaacc acccgtacct acacaagaac cactaacgtt cacccaattt taggtgtgga
    30661 atatctgcaa gatagttatt cattaactga tgcctatttt gcgaaaatgg gcttaaaagt
    30721 acgttacttt atgccgccaa aatccgttgc accctatgcg ttctactttg atgagaatgc
    30781 agatttactc aatgattaca ctaacttaga gctaatcagc acgattgcca caatggaagc
    30841 gttccaaaaa atttaccgtc cggaaattta caatgccaat tcggtcgcag ggcaggtcta
    30901 taaaggcagc ctgacttacc aagattattc cgtcaccaaa gtggaatatg accgtgaaga
    30961 acgcacccag ttggcgatca aacagggtaa atacaccgaa gagcatttta ttaaacgtta
    31021 ccaagcgatt ttagaggctt gggcgacgga ggaataaacg tagggtgggc gtaagcccac
    31081 cataaaatga gatataacca atggtgggct tacgcccacc ctacttttta taggaaaatt
    31141 caaaatgagc aacattcttc tcccaacctc taccgccggc agcctaccaa aaccttcgtg
    31201 gcttgccgag ccggaaaaac tgtggtcacc ttggaaattt gaaggcgagg aactacttca
    31261 agccaaacgt gatgccctcc ttgtttccct tgccgaacaa attgcggcag ggattgatat
    31321 tgttagtgat ggcgaacaga cccgccagca ctttgtgacc acctttatcg agcatttgga
    31381 aggggtggat tttagcaagc gtgaaatcgt gcgcattcgt aaccgttacg atgccagcgt
    31441 gccgagcgtg gtgggggcag tttcccgccc gaaatcggtg tttgtggacg atgccaaatt
    31501 cttgcgtgcg cataccgaca aaccaatcaa atgggcatta cccggcccga tgacaatgat
    31561 cgacactctc tatgacggtc attacaaaag ccgtgaaaaa ttggcgtggg aatttgccaa
    31621 aattctcaac gaagaagcca aagagttgga agcggcaggg gtggatatta ttcaatttga
    31681 cgaaccggca tttaacgtct tcttcgatga gctgaacgac tggggcgtgg cggcgttaga
    31741 gcgtgcggcg gaaggcttaa aatgcgaaac ggcggtgcat atctgctacg gctacggcat
    31801 taaagccaat accgactgga aacagaccct cggcaacgaa tggcgtcaat acgaagagag
    31861 tttcccgaaa ctgcaacaat caaaaatcga cattatctcg ttagagtgcc aaaactcccg
    31921 tgtgccaatg gacttaatcg aattagtgcg tggcaaaaaa gtaatgctgg gagcgattga
    31981 tgtggctacc aacattatcg aaacaccgga acaagtggca gatacgttac gcaaagcatt
    32041 acaatttgtc gatgcggata aactttatcc aagcaccaac tgcggaatgg caccactttc
    32101 acgccaagtc gcacaaggta aattacaggc actcagccaa ggggcagcga tattgcgtgc
    32161 ggaattcgca aaataatttt gcgatctgca tcgaaaatat caactttgct ttttgctcgt
    32221 ttccagattt tcttccaaaa taacaggaaa tgacggaggc actatgctaa atctatttaa
    32281 aaagccaatt aagaaaagct cctttgaggc ttgggcaaaa ctaatggacg atgtggcaaa
    32341 agttgcaatt ttagcaattc ctgttattct ctatggagaa tattcactgc taatgaaatt
    32401 tacacactca attaccttat ttgcagtagt ttattttttg ttagcaacgg caagattgtt
    32461 tcgagaaaca gcagaggaga tgtaaatgga cggattgaca atcggattat ttcttttgct
    32521 tgcattttca tttgctgcat accaatgggc aaagcattta aaagatcata atcattaatt
    32581 caatgaataa tactaagcgg tcatatttgg taaatttttt acaaaatgtg accgcttgtt
    32641 tttctttcac tcgaagttaa tttttatata aataatacta tctatgaaac taaaaaatgc
    32701 gtaaaataac gtgaaatcaa cttacgcaaa cgtttactta agcttattag gagtccaaaa
    32761 atgttaaaac gtgatatgaa tatcgctgat tacgatgcag tattatggca agccattcaa
    32821 gatgaagatc gccgtcaaga agaacatatt gaattaattg catctgaaaa ctatgcaagc
    32881 ccacgtgtaa tgcaggctca aggctcacaa ttaaccaata aatatgcaga aggttatccg
    32941 ggtaaacgtt actatggggg ttgtgagtat gtggatattg tagaacaact tgcgattgac
    33001 cgtgcgaaag cattgttcgg ggcagattat gccaacgttc aaccgcattc aggctcacaa
    33061 gcgaatgcag ccgtatatat ggcgttgctt aatccgggtg acactatttt aggtatgagt
    33121 ttagcgcacg gcgggcattt aacccacggt gcttcagtta gcttctctgg taaaatttat
    33181 aaagcagaac aatacggcat tactgatgaa ggcttaattg attatgaagc attacgcaaa
    33241 caagcccaag aagtgaaacc gaaaatgatt gttgctggtt tctctgctta ttctcaagtt
    33301 atggattggg caaaaatgcg tgagattgcc gatgaagttg gggcatattt atttgtggat
    33361 atggctcacg ttgcaggctt aattgcggcg ggagtttatc caaatccgct tcctcacgct
    33421 cacgtcgtga cgacaacaac ccataaaacc ttagccggcc ctcgaggtgg tttgatttta
    33481 tctgcatctg gcgatgaaga aatgtataag aaactgcaat ctgccgtatt ccctgctggt
    33541 caaggtggac cattgatgca cgttattgcg gcaaaagcgg tttgttttaa agaagcttta
    33601 gagccggaat ttaaggcata tcagcaacaa gttgtaaaaa atgcaaaagc aatggttgag
    33661 gtatttaagc aacgtggttt tgatgtggtt tcaaacggta cggaaaacca tttattcctt
    33721 gttagctttg taaaacaagg tttaaccggc aaagcggcag atgctgcatt aggagctgcg
    33781 aacattaccg tgaataaaaa ctcggtgccg aacgaccctc aaaaaccatt cgtgacttca
    33841 ggtattcgtg tgggtacgcc ttctgtgacc cgccgtggtt ttaaagaagc agaggtgaca
    33901 gcattagccg gctggatgtg cgatgtgcta gatagcattg gtaaggataa tcacgaacag
    33961 gtgattgcag agactaaagc gaaagtttta gacatttgta aacgtttacc agtgtacgca
    34021 taatctcaac tttacacttt ttcaagcggt aatatttttt agaaatatta ccgctttttg
    34081 ttttatcaat cattttcttt atctgttttc tgaaaatgga ttgatttttc tttttttaca
    34141 taacataatg ataataattc tcattaattt attttttgtt atgttacctc gtatttcctc
    34201 ttttttagct agccttttta tggctttttt tcttttaggc tgctcggttt caacgcaatc
    34261 ccttaatgaa caaaacgtgg actctatcgg ccaaattatt gatctgaata ccaatcaaac
    34321 gatttcattt actgaactac tttcccgtct atcttctcaa gattacgttt tagttggtga
    34381 ggagcatact cagttaattc accaccaaat tgaattgtat ttatttaatc aacttacgaa
    34441 gaaagccaag ttacatttaa ttgcgttgga gatgttaaat gtggatcagc agcctgcgat
    34501 tgatcgcatt cagtttaacc gaccggttaa tttatcagcc acggatttaa gagaggcaat
    34561 tcaatggcaa aaatgggatt ggaagatgta tcaagattta gtggtagaga gcttaggttc
    34621 aaatagtcgt gttatagcca ctaacttaac agataaagag gttgaaattt tattaaatgg
    34681 ggcggagcca ttaaaaggtt ctgtatccac ttcctctgaa gttaagcaaa agatcgcaca
    34741 actgttgctg tcaatgaatc acggaatgcc ttacccgatg gaaaatatgg tggcagtaca
    34801 acaattccgt gatcgcagaa tggcagaaaa attagtaaaa aatgcgttat cgactagctt
    34861 gctgattgca ggtaaccacc acgttcgcaa agatcttggc gttccgttgc atattgcgga
    34921 atatgaccga acaaaaaaag tagcggtgct aatgcttaaa acagagagag aagaaattac
    34981 ttcttcacag gcagattatc tttgggtcac tcaataagga gaattatgaa atttaatata
    35041 atcacacgca ttttgtttcc ggttttgtgt atgggaggat cgcaaactgc attggcagag
    35101 gaaaaggcga aaaatattgc ggagcttgat actgtgacgg tttatggcac tgtggaaaac
    35161 cctaattttg agaatttcag taaagccggc tcggtgagtt ctcgagcaat gaatgtgaat
    35221 gcaatgcaaa gtttagatag tattgtccgt tctgtcgcag gtggctatac ccaaattgac
    35281 ccggggcaag ggggcgtgag tgtgaatatt cgtaatatga gtggtcttgg tcgggtaaat
    35341 accttagttg atggcgtgcc acaaacacag cttggtacat cagcaaacgg aggtggtaag
    35401 ttccacactg atggtaacgg gccaatgagc caattcagca ctttaattga tcaaaatttt
    35461 ttaacccgag ttgatattgc gaaaggctac aacaatggtg cagccggatt gaatgcttta
    35521 gccggtagtg ctaattttaa aacgattgat gtcgaagata ttctactaga acaacataaa
    35581 gtcggcgtat taagccgttt taattatggc aataatgatc tgggaaaaaa cggaatgctt
    35641 gcactagccg gaaaagttga tgtgctggaa agtggttctc ttggcagttt attggctttt
    35701 agcaaaagta gtatcagtca aaattatcgc cgaggtaatg gcacaatggc aacggattct
    35761 gcttatatgc aagggttaaa aaatcaccct gaatcttata tgggaaaaat tgcctttaag
    35821 ccaaatcaag attcagagtt taaattgtcc ggacgtcaat ataaaaatag cttagtgggg
    35881 cgtaatattg atagtgtgac ctattcctta gaatccagtt accagcctca atctgattgg
    35941 attgatctga aattcctaac agcagtaaca gaaactaagc aagatttcca cgatgatgca
    36001 aaactatgga cattagaaga tgcctcaacc aaaaacaaaa tgtggatgtt tgatttgaat
    36061 aacaccagcc gttttgagtc agggaaataa atattcccgt gatttaccgg aaagtaagaa
    36121 taatgatgga gcgattagca atgccgcttt tgggccggca ggtaagcaaa atattgattc
    36181 cctttaccta gacaccgaat ggaaatacgg cattgtcact ttaaattcaa gtcttcacta
    36241 ttcacgctat cagttaaaag gatataagcc agaatgcgat agcgatgata tggattattg
    36301 tttcccttct tttgggtttg atgttaataa aaaacattat aagttgaatc cttctgccac
    36361 tttagcattt caggttgctg attggtttca accttttgtc agttacaaac aaacctcccg
    36421 ttcgcctaat gtgcaagaaa tgtttaatac cagtcgaaat ggcttgagtg tgaacccgtt
    36481 tttgaaacca gaaagtgcga aaacctatga gattgggttt aatattcatc aagataatgt
    36541 attactcaat aatgatatct tggggctaaa agcggtatat tttaactcac gcattaaaga
    36601 ctatttgtat aacctctcgt tgtatggttg tgggccaaca gtatgtcgaa attcaagtga
    36661 tgctaccaat gctatacagt tccaaattta tgtgaatcac cctgaaaagg ttaaaaatcg
    36721 aggttgggaa gttgagctgg cttacgattc cgatgctttt tttgtcaatg gtagttatac
    36781 ccgaactgaa agcacagcac ccacttcaaa aggtgcgact attctttatg gatttggcac
    36841 tgaagcttat acccagctac caaaagatta tgcgactttg gagctagggg ctaaattgct
    36901 ggataaaaaa ttaacactgt ctagcatttt taaatataca ggcaaagcga aacgtgtcgg
    36961 tattgattta gacgaagatg gcaacattat tcacgagcag ttaccgaata ttccggtgat
    37021 tatcgattta tatgcaaatt acaaagtgaa taaacattta accttaaaag ccggggtaca
    37081 aaatgtgatg aaccgaaatt atcttgatgc cttaaatgcg tataactctt ccaccgcaga
    37141 agagtatgac tatgatacag acacctatcg tttcacaaat agtgccagag gtcgaactta
    37201 cacactaggg gcagaggtgc gtttctagct tgaaagtggc ttattttaac caatacgccc
    37261 tttttctttc ctgtactgat gttgagattc aaggcataat atccagaacg atgaatattc
    37321 agccggtgtg taatatgaaa aaatttgtgg ttttaatttc agggaatggt tctaacctac
    37381 aagcaatgat tgatgcgcaa aaatctgcgg atacaagcgg tcaaatttgc ggtgtaattt
    37441 gcaataaggc agatgcctat gggctgattc gagctaaaca ggcgggaatc ccgacatttg
    37501 tattttctcg taaagattac caaagcaatg tggaaatgga tcttgcgatt gccgaacaaa
    37561 ttgagcagtt aggagctgag ttaattgtat tagccggcta tatgaaaatt ttaacgcctg
    37621 aatttacgca acattttgct ggcaaaatac tcaatattca cccttcctta ttacctaaat
    37681 acccagggct aaacacttat caaagagcga tagaggctgg ggaaagtgaa cacggcacga
    37741 ctattcattt cgtgaatgaa gaagtggatg ctggtgcggt ggtattacaa gctaaagtgc
    37801 cgatttatcc tgaagatgag attgaagatg taatggctcg agtggttgag caagaacatc
    37861 gatattatcc gttggtgatt gagtggttct gttcgggtag attagtttct cagcacggca
    37921 aagcgtattt agacggtaaa ctactgcctg cttgtggata tgcagaagat taaacgatag
    37981 ggtgcatcgc accctaactt tcagctaatg cagggcaaag ataatattgc ccgctgtgag
    38041 ggcaatagcg acagcccatt ttcatttcat acagctcatc taataaacaa ctttctgcaa
    38101 tggctttagc ggacatttca gcaaattttt ctccattttt tagcattaag atatgatcgg
    38161 cttgatttat tgccaatgca ggatcgtgca aaatcgcaat gatagttaag ccttgttgtt
    38221 tcagcttttg tagtaaggaa aaaagctgat attggtgatg aatatccaaa tggttggtgg
    38281 gttcatcaag caaaagccag cttccgctta aatcggcatt cggttcagga acgagttgag
    38341 ccagcactcg agcaatatgc gctcgatgtt gttctccacc ggaaagttgt atgctacttc
    38401 tttcttttaa tgcggttaaa gacattgttt ccatagccca agcggttatt ttttcattaa
    38461 attttgcaaa ttcactttgg cgatatggct ctcttccgag ttgtaccaat tcttctactt
    38521 ttaagggaaa ggcaatttgg ctctgttggc tgagcattgc ccgtttttga gccagagcat
    38581 atccgtttaa gtctgttaag cgttgatgtt gataaaatac ggcactgtta gtttgtgcat
    38641 tattaccgct taaggctttg agcaaggttg ttttgccggc tccgtttgga ccgatgatgg
    38701 cggtaaattt tccttgttca aaggcaattt cttgaatctc cagcaacttt ttttgttgat
    38761 gaacgatgct taaattttgg caagttaata aattgctcat tagatatgtt tcccactttt
    38821 ccataccatt actgcaagga atggcgcacc aaataaggcg gtaaaaatac caatcgggat
    38881 ttctgccggg gcggctaggg ttctggcaag agtatctgca atcattaata agattgcacc
    38941 gcaaaccaaa ctattgagta ataaatggcg gtggttactg cctcccagta aacgcattaa
    39001 atgtggaata accagcccga caaagccgat agccccaaca caggcaacgc ttgtgccggt
    39061 taataaggca acgtaaaaca caagacgacg tttgactttt gcaatgtcaa aaccaatgta
    39121 ttgtgcatct tcttcaccta atgttaaggc gtttaacgca cggtgttccc gccaaataag
    39181 tgggctacaa atgaagacaa ccgcagccat cattgccacc atttgccaat tcatacctgc
    39241 taaagatccc atactccaaa aggttaaact acgaagttgg ttatcatcgg caacataaat
    39301 cagtatgccg gttaaagcgc cactaaatgc agctagagca ataccaatta atagcataat
    39361 ggcgatatgt agttgcccgt tacgttgaga aagtaaatag agcataaaag tcaccagcca
    39421 gccccctaaa aaggcggcaa taggtagagc ataatagctg attgattccg gcagtagtgg
    39481 ctgaatcacc acaatatata atgccgcagc caatgcagca cctgaagaga caccaataat
    39541 ccccggatct actaacggat tgcgaaacag cccttgcatt gttgctccgc taatagcgag
    39601 ggctgccccg atgaataatg cccctagtaa tcgaggcagg cggatttgcc ataaaatata
    39661 ggctgcactt tcgcattcag cgttgttgca gtgccaagcg gataggggta atgacatcgc
    39721 ccctaaatgg gtacaaatca ctaagctgat aattaaagtg aaaattaagg ttaaatgcag
    39781 tttcaaagcg tatccgttat tttaaacaag gttgaatagt ggtgagaatt tggtgtgcat
    39841 attgagcagt gtaaggccca aagcccaagg catctaaaat attgattgca aaaacacagc
    39901 cttttttgcc cgcttgtgta tttgtgagtt gggcgtattg tgggctggat tctgctaatt
    39961 tactgatcgt tgcagattct tttgcctgat tacgggaggc taataaaata acatcggcat
    40021 tgcttgcagc taaagcctca ttggcgagtg gcttattgcc ctcagcattg aaactattgt
    40081 ttagatttaa caaggttaag aaatgatcac ccacactctt tttccctagc ccaaagatac
    40141 cttgcgatgc agtgtcaatc agcactaaga cttctttgtc agtagaatgt tggctacgaa
    40201 tgtcggctaa ttttttttca tctgccagaa tggtttctgt taattgtttt gcctctgatt
    40261 ctgcaccaat cgccttggca atttgctgaa tatcctcacg aatccctgct aagctcggtt
    40321 tctctcctaa gtgaagtaat ggaataccgc tggctttaat ttgctcaata actgcgttag
    40381 ggccggcatc aggggctaaa ataatcaaat ctggggttaa agagagaata ccttcagcag
    40441 aaagctggcg acgataaccg attttaggtt ttttctccat tatcgtttga ggtttaactg
    40501 aagtggtatc cacaccgact aacttatcag cttttcctag tgctgcgaca atttcggaag
    40561 catagcccgc agttgaaaca attttttctg ccgcctttgt ggtatttaaa cacattgata
    40621 gggcaatgaa agaaaaaagt aaggttctca ttttatactc catttgattt ttatctaaac
    40681 ttaaataata ataattatta tttcaatttt caattaaaat gatatagtgt taacattaaa
    40741 cggattaaac taactagagg atctaaaata tgcaaataaa gcaaactgta ttagcaatag
    40801 cgattactcc ctttatttct caactctcct tagctcaaga aacaaagatt agtagcattg
    40861 aactagatac tattgaagta aatgagcagc aggagaacct acttaaacag caagcggtga
    40921 tgagcaatga agatttagta cgttatagta ctgatatggg cgttccgcaa acaggccgct
    40981 ttggcccaca agggtttaat atccgtggtg ttgaaggtaa tcaagtggca gtaacagttg
    41041 atggcatatc gcaagcagca tcaaataact atgccacctt tagtcgctat agttactaca
    41101 ataaatctcg ccctgaaatc gatactgaat taatgagcga tgtaaccatt gaaaaaggct
    41161 caagcacaaa agtaggcaat ggggcattag gcggctctgt gaactataaa actaaaaccg
    41221 taagtgatat tttaatgaaa ggtcgccaat ttggtgggat gttgaaatat acctataacg
    41281 gtcaaaataa agagaatatt gagacggcag gtattgctgc ggatggtcaa tatgcggatg
    41341 ctttggttat gtatagccac cgtcaaggac acgaaacaca aacaacgtct aaaggtccgg
    41401 atattatggg aagtggtcgt ggtttaccaa atccttacaa aaataatcaa tacagctact
    41461 tggcaaaatt agggctaaaa tggaatgatg aaaatcgcct tgaattaaaa acttctaagc
    41521 aacgcagtaa aaacgccggt caagagcttt cttattctac cgtcacatta cgtgattttt
    41581 tggatgtgca ggaaattgaa acttatggcg ttacttattt atacactcca aaaaacagta
    41641 ttcttgaaaa tattaaagtt gcggtaacca aacaggatac tgaaatttca ggtattaacg
    41701 atcaaatcac tattgcccgt ggtacaaaaa cagataatac caaacgggct tttaatacta
    41761 aaaatgttga aggtagctta ggtgttacat tcaagcctgt tgatctaggt aataccgaac
    41821 ataaattgtc aacggaatta ggctatggtg tatctgattt cagttttgat atgcaaacct
    41881 atacagcagg tattacgcca accgatcaaa atatgcagtc tccggcaaaa accaagtctt
    41941 tccatatttt gatgggagac tctattttac tgacacaaaa tctatctgct catttaaatg
    42001 ctcgatatga gcagtcgaaa ttacattctg atgataatag tttgtcagat aaaaccttta
    42061 acaattgggc gggagatatt ggtttaaatt atcagctctc tcctgtatgg caaattggct
    42121 ataaactcag ccgtggtttt agaacaccta ccgcaagtga aatgttcttt aaccgtgaag
    42181 ttcaagggcg tggagcaagc caaactttct tagcaaatac taacttaaaa ccggaaacaa
    42241 gcttaggtaa tgaaatttca ctggtaggta atggttcatt aggtagcttg agcgtagccg
    42301 cttaccatac ccactataga aatctgattg atcttgccac tattggtaac aatatttacc
    42361 aatcgcaaaa tgttaaccga gctaaaatca aaggtgttga tattaacgga actttagact
    42421 taaacacagc gtggaatgca attccacaag gctttgagct taatggtgga tttggttatg
    42481 ctcgtggcaa acgtaatgat ggtaccgact tactcacggt tcaaccgtta aaagcattgt
    42541 tcggcatagg ttatcgagct gtgaacaatg actgggcgat acacctaaac ggcacataca
    42601 cacaaggcaa aaaagcaaaa tatgcacaac agtatgctat tttagccaat actgggtatt
    42661 taagttacga taaatcatta accacttacc catacttaag taattcagcc accgtatttg
    42721 acttagttgc acacaaaaag tttggagaaa gagcgattgt taaagttggg gtttataatc
    42781 tctttaataa aaaatattgg acttgggata gtttaagaac tattggtata actagtcctg
    42841 gagttgccaa cagtataact ggcgaaggct taaatcgtta ccttgctcca gagcgctatg
    42901 taatggcatc agtggagttt aaattttaga gataagcatt aaatgtaaga
//
LOCUS       DANLXD010000005        42501 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.005, whole genome shotgun sequence.
ACCESSION   DANLXD010000005 DANLXD010000000
VERSION     DANLXD010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 42501)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42501)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42501
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.005"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            128..2755
                     /gene="alaS"
                     /locus_tag="PXD18_000218"
     CDS             128..2755
                     /gene="alaS"
                     /locus_tag="PXD18_000218"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HDL6300688.1"
                     /translation="MKTTSDIRQSFLEFFQTKGHTIVPSSSLVPENDPTLLFTNAGMN
                     QFKDVFLGLEKRPYSRATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYF
                     KQDAIKFGWEFLTSPQWLGLPKEKLYVTVYETDDEAYDIWHKEVGVPSEHIIRIGDNK
                     GAPYASDNFWAMGDTGPCGPCTEIFYDHGPEHWGGLPGSPEEDGDRYIEVWNIVFMQF
                     NRLADGTMEKLPKPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEVATLLNVKDLD
                     NKSLRVVADHIRACSYLIADGVLPSNEGRGYVLRRIIRRAVRHGNILGAKEAFFYKLV
                     PTLATVMGQAGEVLTQKQAHIQKTLKAEEEQFARTLERGLNLLEEALAKVENNTLSGE
                     VAFKLYDTYGFPLDLTADVCRERDIKIDEDGFNAEMTAQRERAKASSSFGTDYNNVIK
                     VDSKTCFSGYTETSLNDATVIGLFSNGKSVESIQSGENAVVILDKTPFYAEMGGQVGD
                     SGQISAEICNFEVVDTQKYGQVFGHIGQLTSGSLSVGDKVNTIVDRERRHAITLNHSA
                     THLLHSALRQVLGDHVAQKGSLVSENILRFDISQPEAITKSQLEEVERIVNAKVRENI
                     QVIIEEMDIESAKAKGAMALFGEKYGEVVRVVEMSDFSIELCGGTHVKQTGDIGLFKI
                     TSEGAVAAGVRRIEAVTGENAIAWLHTLQQAVQQSAELLKADSHSFVEKIVQLQEKAK
                     RTEKELQQLKDKLAAQAGSDLAKQATQINGVNVVIQQLENVEPKALRTMVDDLKNQLG
                     SAVVVFATTAEDKVNLIVGVTKDLTDKVNAGQLVGAMAEKVGGKGGGRPDMAMAGGSE
                     PQHLLQALSLAQEWITAKL"
     gene            2845..3030
                     /gene="csrA"
                     /locus_tag="PXD18_000219"
     CDS             2845..3030
                     /gene="csrA"
                     /locus_tag="PXD18_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HDL6300689.1"
                     /translation="MLILTRKIGEVLLVGDDVEITVLSIRGNQVKLGVNAPKEISVHR
                     REIYERIKASVEEENAE"
     gene            3166..4053
                     /gene="galU"
                     /locus_tag="PXD18_000220"
     CDS             3166..4053
                     /gene="galU"
                     /locus_tag="PXD18_000220"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HDL6300690.1"
                     /translation="MKVIIPVAGLGTRMLPATKAIPKEMLILADKPLIQYIVNECVAA
                     GFKEIVLVTHSSKNAIENHFDTSFELETMLEKRVKRQLLDDVRSIVPKDVTLIHVRQG
                     QAKGLGHAVLCGRTVVGDEPFAVVLPDVLLGEFTANQKTENLAAMVKRFQETGYSQIM
                     VAPVPMENVSSYGVADCHGVDIPLGGAAPIAKMVEKPSIEEAPSNLAVVGRYVFSSNI
                     WNLLEKTPVGVGDEIQLTDAIDMLIHQETVEAFHMTGRSFDCGYKVGYMKAFVEYSLN
                     HDKCGKEFKAFIKELAKSL"
     gene            4318..5661
                     /gene="mukF"
                     /locus_tag="PXD18_000221"
     CDS             4318..5661
                     /gene="mukF"
                     /locus_tag="PXD18_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukF"
                     /protein_id="HDL6300691.1"
                     /translation="MQNELAQTIPELISWTKDREFSLSLSSDRLAFLLAISIYNQEQT
                     DGELLESDLIDLFRYVSNSFEQSDATFTQRANNAINDLVRQRLLNRFSSEFTEGLAIY
                     RVTPLGVGISNYYVRQREFSTLRLSIQLSIVADEIQRASVAAEEGIEQAQDERFWRNN
                     VFAPLKYSVAEIFDSIDLSQRIMDENQHQIRERIAELLSQNWHEAIMSCEQLLDETSG
                     NLRELQDTLNAAGDKLQAQLLRIQSCLMARNDLDFIDQLIVNLQNKLDRIISWGQQAI
                     DLWIGYDRHVHKFIRTAIDMDKNRVFGQRLRQSIQDYYNSPWLLYTAKADSLLDLRDD
                     EAMLNEAESVGELPSELEYESLSDVQEQIVSAMQAHLAPFRAEGKPIDLGVILREQLA
                     RFPESRHFDVARIIVDQAVKLGMASQDSQAVYPQWQPINEQGAEVQANVIDQYNK"
     gene            5710..6426
                     /gene="mukE"
                     /locus_tag="PXD18_000222"
     CDS             5710..6426
                     /gene="mukE"
                     /locus_tag="PXD18_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukE"
                     /protein_id="HDL6300692.1"
                     /translation="MTENIQDFISPKLALAIANPIFPELDSQLRAGRHINTEQLDQHV
                     FLMDFQAELESFYRRYHVELIRAPEGFFYLRPKASTLIARSAMSEMEMLVGKVLCYLY
                     LSPERLAQQGIFSQDDVYEELLSLADESKLLKAVNPRSTGSDLDRAKLAEKAGGALRR
                     LARIGIITRVGEQNSKKFVISESVFRFGADVRTGDDPREAQLRLIRDGEATTPALLNE
                     QAVEIDENIADEAPFDGENE"
     gene            6602..11062
                     /gene="mukB"
                     /locus_tag="PXD18_000223"
     CDS             6602..11062
                     /gene="mukB"
                     /locus_tag="PXD18_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukB"
                     /protein_id="HDL6300693.1"
                     /translation="MIDTTELQNNPQIAPLARPNDVQRGKFLSLTLINWNGFFARTFD
                     LDDLVTTLSGGNGAGKSTTMAGFVTALIPDLTLLNFRNTTEAGSTAGSRDKGLYGKLK
                     AGVCYAVLESFNSRGQRIITGVRLQQIVGRDKKVDIRSFSLQNIPQEQSIISLLTEQV
                     GNKARVLALNELKDQFENSEVQFKQYHSITDYHSFMFDLGVIPKRLRSAADRSKFYKL
                     IEASLYGGISSVITKSLRDYLLPENTGVRQAFQDMESALRENRMTLEAIKVTQSDRDM
                     FKRLITESTNYVSADYMRNANERRGNVQQALEQRKEWYAAKSKILLEQQRFVEFSRES
                     ADIAEAELALEADYNSANDHLNLVMNALRHQEKIERYQDEVEELNIKLEEQQEALEEI
                     AEIAENAQARADEADDHVEELRSQMADYQQALDAQQTRALQYQQAVNALEKAKQLTGL
                     VNLDLNNIEDYHAEFVAQAEDLTDQVFELEQRLSVSDMAKTQFEKAFELVCKISGEID
                     RLQAWEEARALLSAFPEQKMQAQQAVSLRQKLNDLEQRLQQQQNAQRLVAEFNQKSQQ
                     QLNSAEELDAYFEEQQARLEDLEAELSDFVEQRSTQRQQREQLNQQYQQLAKNAPAWH
                     TAQSALTRLEEQCGEKFEASQSVMQFMQNMLSKEREATLARDELARKEQMLDEQINRL
                     SQPDGSEDARLNQLAERFGGVLLSELYDDVSIEDAPYFSALYGEARHAIVVRDLEAVK
                     TQLEKLDDCPSDLYLIEGDPSAFDDAVFSAEELGEGVVVKVSDRQWRYSKFPEVPLFG
                     RAAREKHLATLKAERDETAEKHAERAFDVQKCQRLHQHLSQFIGTHLNLAFQENPEML
                     MQEIAAERAEIERELAQSAGNEQQLRHQLESVKAQLQMLNKILPLANLLADETLEARA
                     EECREQLELAEEDEMFIRQFGATLSQLEPIAAALKSDPALFEQLEADYRRSVAEQKVL
                     QQKVFSLADVMNRRLHFSYQETVGTEGSALTEQLRQRLENAQREREQARDQLRQAQAQ
                     LSQYNQVLTGLRSSYEAKNQMLQELIREIDDLGVRGDSGAEERARFRRDELQQRLSQQ
                     RSRKGYLDKQIAVIEAEMDNLNRTLRKAERDYHTQRELVVQAKASWCIVQRLSRNSDV
                     EKRLNRRELAYQSAEELRSISDKALGALRTAVADNEYLRDSLRASEDSRKPENKVAFF
                     IAVYQHLRERIRQDIIKTDDPIDAIEQMEIELSRLTNELTGREKKLAISAESVANILR
                     KTIQREQQRILQLNQGLQNIAFGQVKGVRLVVNIRDTHAILLNALSNNREEHKDLFDS
                     QKLSFSEALAMLYKRVNPHIEMGQRTPQTIGEELLDYRNYLDLEVETFRGADGWMRAE
                     SSALSTGEAIGTGMSILLMVVQSWEEEARRMRAKDILPARLLFLDEAARLDATSINTL
                     FELCERLDMQLLIAAPENISPERGTTYKLVRKITNNQEYVHVVGLKGFAK"
     gene            11104..11484
                     /locus_tag="PXD18_000224"
     CDS             11104..11484
                     /locus_tag="PXD18_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6300694.1"
                     /translation="METLAIFLFSEIWKFDFVFTFIFKILKINVFFSDLINMKLARKA
                     QRRLSFLRVFSLAFAAFIVNTTEFIPIALLSDIASSFQMEPSSAGIMMTVYAWVVFLL
                     SLPLMLLTANMERKRLLLMLFMGE"
     gene            11481..12182
                     /locus_tag="PXD18_000225"
     CDS             11481..12182
                     /locus_tag="PXD18_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6300695.1"
                     /translation="MIGQALGWRATFGIIGIIALIVLMMIWRLLPYLPSKNAGSIKSL
                     PLLFKRPMLIGIYLLVALIVSGHFTAYSYIEPFMIKISSVSVENTTFILLVFGLAGVV
                     ASFLFGRLYGKAPNKFILSGIAIIMCSQLCLLFLSDSTVAMFMVAFVWGIGITGMSIA
                     LQMKVLELAPDATDVATAIFSGTYNLGIGGGALLGSIAIQQLGLANIGFAGGSIAFVA
                     MVWFVFVSLKYRQLR"
     gene            complement(12249..13982)
                     /locus_tag="PXD18_000226"
     CDS             complement(12249..13982)
                     /locus_tag="PXD18_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3413 domain-containing protein"
                     /protein_id="HDL6300696.1"
                     /translation="MFARLRSLLPTNSRQYREETSQKITWGHWFALFNIVLALLISSR
                     YAFNADWPNTLVGKLYFFVSLFGHFSFVVFAGFLLILFPLSFIVKNHRTYRGLSVILA
                     TIGQTVLLVDTEVFKQFYLHLSPLVWDLLVNPEEGELTRKWQLLFVPMPLLLLAEMLY
                     SRWCWQKLRSFSRQKWGKYVALFFVISFTATHLIYAWADMNAYRPITAQRANYPLSYP
                     MTARNFLEKHGFIDRVEFNQEIEESGRLDTFYLNYPKSPLIATKTPSTNILLINLSGL
                     SKQIINAETMPKLTEISQQSHRFMQHYSSGDSASAGALGLFYSLSGKYLDSVLADKTV
                     SPLIEIARKSDYQLGLFSHNGFADPIYHQAIFSGILLPTAHSNVGAIGQWKNWISSRS
                     LENPFFSYLDLRMPFAHTAQEQAKLLDWQFAEIWQHLTQNALLANTLVIITADISNEV
                     GAENSFDKQHIQVPMMFYWQGESKEYHFLSSHLDIMPTLLSQFFGVQNPLNDYAQGMD
                     LSTQNQRLWVSSSNHKWNVAIMPNGDQYQIDRKGNFKHFNSNGEHEKDARPPLALFLQ
                     MIQQSNQFIEK"
     gene            complement(13987..14208)
                     /locus_tag="PXD18_000227"
     CDS             complement(13987..14208)
                     /locus_tag="PXD18_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1414 domain-containing protein"
                     /protein_id="HDL6300697.1"
                     /translation="MATKSKYHTKQFEQLLADLIATIEKHKAPVDLSLMALGNMITNI
                     LIENIQSPAQREALADAFADALKQSLKTK"
     gene            14447..15019
                     /locus_tag="PXD18_000228"
     CDS             14447..15019
                     /locus_tag="PXD18_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDL6300698.1"
                     /translation="MSRRSEPKEEMVNRILSATESLIVQEGLQNLSMRSIAKEAGIAS
                     GTLYLYFKTKDDLLHSLAAQLLECYNGYMHFEFKPEMALFEQYKALVNKKWQFLIERL
                     DLVKQFQAVIGIDELIRETIADETSFWNKLILEGKKQRIIADLSNELLYGLSIGTLVD
                     IQYLQNLNQENQFDGYLDEIILRTWKAITF"
     gene            15050..16255
                     /locus_tag="PXD18_000229"
     CDS             15050..16255
                     /locus_tag="PXD18_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDL6300699.1"
                     /translation="MTTETQKLGKGRKFLIVLTLLIVLIVFAAIVGLQKIGAMKKAEA
                     AANMPEAVSEVTAMQVTTQEWTPTISAVGYIRPNQGAMLSAETSGVVSRVLVTSGQRV
                     KKGDLLVEFDSSVEIANLRASEAQLPNAKANLERYRNLIASNSASKAEFDNAQSTYNQ
                     LLANIEALRATIKRRQIYAPFSGLAGIVNVNVGQYITMGTEIVRVEDQSSMKVRFTLP
                     QTNLEQISIGQKVTAVIDALPAQTFPAKIVAIDPAVDRLTGLINVEAVIEEGQEKLLS
                     GMFARLNVALPTETGQIVVPQISIAYTMYGETVYVLQPLSDEDKEMVNKMAVQNPSLD
                     VNKMYRAKQMEVKTADRKGNYSQLSKGVKAGDLIVTGGLQRLSNNALVKVSDTEAVGI
                     TTPAKNSKL"
     gene            16269..19436
                     /locus_tag="PXD18_000230"
     CDS             16269..19436
                     /locus_tag="PXD18_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDL6300700.1"
                     /translation="MKFTDIFIKRPVLAVCISLLITILGLQAIEKLQVREYPEMTVSI
                     VTVSVNYSGADARLMQTLVTSQLEEAVAQADNIDYMTSSSSPSTTTVTAKMKLNTDPN
                     AALSDISAKVNAVRSNLPSGIDDPSIRVSTGSNDALMYIRFVSDELNTSQVTDYINRV
                     VKPQFFTVNGVSSVDVYGSVFGLRIWLDPDKMASNNLSGAAVLSALSANNLQTAAGNS
                     NGYYTVYRNKVLSTTPSVTELEEVTVSTTKDGKTIKLKDIATVELDKYQDAARATVGG
                     KDAVVLAVSVAATANSLTVAKDIYPMFEQVLKNLPSTIQGDIVYDKTIAIDSSIKEVI
                     KTIGEATVIVLVVIILFLGSLRAMIVPVITIPISLIGVLFFLQMFGFSINLLTLLALV
                     LAIGLVVDDAIVVLENVERHVKEGKTPFDAAIIGTREIALPVISMTITLGAVYSPMAL
                     MTGVTGTLFKEFALTLAGAVFISGIAALTLSPMMSSRILKEHKEGEESAFARVVHRSL
                     DKMTSCYTNMLSGIMAVRGFVLFFAVLIFASLPMLFGSLSSEVAPTEDRGFVVGISNG
                     PSNTNLDYTEAALAQFNQEVTKLPEVSSLMTVSGFNGANSALSIIALKDWNDRSRERA
                     AISNDVAAIGKKVVGMDVNAIAFPEISTGENGLPFSLVITTADSYEKLAIVASEFLKK
                     AQTSGQFFFANLDLKFDTVTMNMKFDREKMGAYGVTMQQVSGTLGAFLSGAIITRVDI
                     DSRAYPIVSQAVRNDRLNPEDLMNYYVTTATGQSIPLGSFVTMELKTSPSSLPRMSQL
                     NSATIGGVVSGSIGDAVNWAKAELDRTLPSGYQYDFRGESRQFVQEGNAMAMTFALAV
                     IIIYLVLAIQFESWRDPLVILVSVPLAVSGALLVMNIPTAMKGLFMGIAAGTGSKDMM
                     AFANGIWTAGYTLNIYSQVGLITLVGLITKHGILMCEVAKEEQLLHGKSRYEAIFHAA
                     TIRLRPIMMTTAAMIAGLIPLLFAVGAGAIARFSMGMVIVAGLAIGTLFTLFILPVIY
                     TFLGQEHKPLREFDEEKYFPTTKEA"
     gene            19664..21127
                     /gene="guaB"
                     /locus_tag="PXD18_000231"
     CDS             19664..21127
                     /gene="guaB"
                     /locus_tag="PXD18_000231"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HDL6300701.1"
                     /translation="MLRIKQEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPM
                     LSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIVSEPVTISP
                     DMTLAELAELVKKNGFAGYPVIDENQNLVGIITGRDTRFVTDLSKTVREFMTPKDRLV
                     TVKENASREEIFHLMHEHRVEKVLVVNNEFQLKGMITLKDYQKAESKPNACKDEFGRL
                     RVGAAVGAGPGNEERIDALVKAGVDVLLIDSSHGHSEGVLQRVRETRAKYPDLPIVAG
                     NIATAEGAIALADAGASAVKVGIGPGSICTTRIVTGVGVPQITAIAEAAAALKERGIP
                     VIADGGIRYSGDISKAIAAGASCVMVGSMFAGTEEAPGEIELYQGRAFKSYRGMGSLG
                     AMSKGSSDRYFQSDNAADKLVPEGIEGRIAYKGYLKEIIHQQMGGLRSCMGLTGCATI
                     EELRTKAEFVRISGAGIKESHVHDVTITKEAPNYRMG"
     gene            21248..21919
                     /locus_tag="PXD18_000232"
     CDS             21248..21919
                     /locus_tag="PXD18_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HDL6300702.1"
                     /translation="MLQAIIFDMDGVIVDTEYLEFSLQKQFIEDIKEHSRPITLEQQS
                     EVVGKCLKEIPVIIKKLSESSLPIEEIRARYYAFFQDLFSKVDFKTIFRADIQQIIQF
                     AKQNQIKLAVASSSALSHIENILTVCGIKDEFDLIVSGEQFEHSKPDPTIYRYTCEKL
                     GVEPQNAVAIEDSYYGMLAAKTAGLTVIGYEEKRILIDQSLADYMGKDMKEILKILQK
                     CNTPS"
     gene            22041..22352
                     /locus_tag="PXD18_000233"
     CDS             22041..22352
                     /locus_tag="PXD18_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300703.1"
                     /translation="MKKLSLISIVALSACSIFGPSYSGETTASPLLKLDTERNINLYF
                     QAIHKCTPDKIHTKIINIPSEGNAKELWTATGCNKTQSFIITYRNDGVGGTFINMTTT
                     P"
     gene            22369..23940
                     /gene="guaA"
                     /locus_tag="PXD18_000234"
     CDS             22369..23940
                     /gene="guaA"
                     /locus_tag="PXD18_000234"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HDL6300704.1"
                     /translation="MTNIHHHKILILDFGSQYTQLIARRVREIGVYCELWAWDVTEEQ
                     IREFNPTGIILSGGPESTTEENSPRAPEYVFNAGLPVLGICYGMQTMAMQLGGLTETS
                     DHREFGYASVALKSADQLFANLNDDLTACEPKLDVWMSHGDKVTKLPPHFTITGVTPT
                     CPIAAMSDESRRFYGVQFHPEVTHTKQGLALLKNFVVGICGCETNWTAENIIEDAVKR
                     IREQVGDDEVILGLSGGVDSSVTALLLHRAIGKNLHCVFVDNGLLRLNEGDQVMEMFG
                     NKFGLNIVRVNAEDRFLEALKGLDEPEAKRKTIGKVFVDVFDDESKKLSSVKWLAQGT
                     IYPDVIESAASKTGKAHVIKSHHNVGGLPDYMKLGLVEPLRELFKDEVRKIGLALGLP
                     AEMLNRHPFPGPGLGVRVLGEIKKEYCDLLRKADAIFIEELHKAGWYYKVSQAFTVFL
                     PVKSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDLLGKISNRIINEVNGISRV
                     VYDVSGKPPATIEWE"
     gene            complement(24101..24496)
                     /locus_tag="PXD18_000235"
     CDS             complement(24101..24496)
                     /locus_tag="PXD18_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcB family protein"
                     /protein_id="HDL6300705.1"
                     /translation="MEQWTTDVWAAIMAAFIVGAVIGCTLVRVFNSSVRKQHELEKEL
                     KQTKTQVDEQKQKLEQHFEQSAQLLSSLASDYKKLYTHLAQSSEKLLPEASKNITFFQ
                     QTKLPIPAEKTEEDQPRDYSEGSSGLLKS"
     gene            24795..25223
                     /gene="rplM"
                     /locus_tag="PXD18_000236"
     CDS             24795..25223
                     /gene="rplM"
                     /locus_tag="PXD18_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HDL6300706.1"
                     /translation="MKTFVAKPETVQRDWYVVDATGKTLGRLATELARRLRGKHKPEY
                     TPHVDTGDYIIVINADKVAVTGKKQTDKIYYWHTGYVGGIKDATFKEMIARRPEAVIE
                     IAVKGMLPKGPLGREMFRKLKVYAGSEHNHQAQQPQVLDI"
     gene            25240..25635
                     /gene="rpsI"
                     /locus_tag="PXD18_000237"
     CDS             25240..25635
                     /gene="rpsI"
                     /locus_tag="PXD18_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HDL6300707.1"
                     /translation="MTAANQNYGTGRRKSSSARVFIKPGSGNITINQRSLEVYFGRET
                     ARMIVRQPLELVELTDKLDLYITVKGGGISGQAGAIRHGITRALMEYDETLRPALRAA
                     GFVTRDARRVERKKVGLHKARRRPQYSKR"
     gene            27317..29037
                     /gene="ltrA"
                     /locus_tag="PXD18_000238"
                     /pseudo
     CDS             27317..29037
                     /gene="ltrA"
                     /locus_tag="PXD18_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341372.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
     gene            29226..30002
                     /gene="yaaA"
                     /locus_tag="PXD18_000239"
     CDS             29226..30002
                     /gene="yaaA"
                     /locus_tag="PXD18_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HDL6300708.1"
                     /translation="MLAIISPAKTLDFKTNIDGFAFSQPNLTACSQELIDICKQLSPA
                     ELGSLMSISDKLAALNVARFAEWQLEHNEQNAKAALFAFKGDVYTGLEAETLSKAQVE
                     YAQQHLRMLSGLYGLLKPLDLMQPYRLEMGTKLANPKGKDLYAFWGNIITENLQQAID
                     EQGDDILVNLASDEYYGAVKPQNLNATIIKPVFLDEKNGKYKVISFYAKKARGMMVRF
                     ILDTQPTSIEQLKQFNYGGYWFDADSSSESELVFKREEQA"
     gene            30002..30565
                     /locus_tag="PXD18_000240"
     CDS             30002..30565
                     /locus_tag="PXD18_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATPase"
                     /protein_id="HDL6300709.1"
                     /translation="MSAIKKGITLVALSLAGCVSQSPQFAVPDAIHFGQDTFVKVTHS
                     QIDEMQHLLYLPEKSEKNPENWQKGILFFLDKNSKNQTLEQRAAFRQASFAKKPELEA
                     KVEIQQNELHSSVIYPPIERFNNVMLEVTRGRNLACGYGQIQFADKREVGKTVAKKSP
                     NLTAYSQEIARLSLELNQLGWQVQCSK"
     gene            30574..31479
                     /locus_tag="PXD18_000241"
     CDS             30574..31479
                     /locus_tag="PXD18_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HDL6300710.1"
                     /translation="MNEKYSKLVKNAANLAIIVAILLIVIKAFAWWKTGSISILAAMT
                     DSVVDLFASLTNILVLRFALQPADENHAFGHGKAESLAALAQSAFISGSAVFLLLQGF
                     HKLTNPELIAQSSIGVIVSIVSIVITALLVFYQRYVVTLTKSPAIEADSLHYQTDLLM
                     NAAILVAMLLNSAGFVYADAVFAIGIALYIAFNAVKMFWCAVQTLLDQALPDEEIERI
                     KEIASQHPNILGIHDILTRRAGAVRFIQLHLELDDHLTLLVAHEITDSLEQKLLAAFP
                     MSHVIIHQEPTTVVKQEFQDMAENI"
     gene            31479..32231
                     /locus_tag="PXD18_000242"
     CDS             31479..32231
                     /locus_tag="PXD18_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon-containing protein"
                     /protein_id="HDL6300711.1"
                     /translation="MYQAIVHFSYHNFEQDPVTAISQILNQWLYNGQVIGREMPITFH
                     QNEFQARVCVPTQESLLPQYNSDEVNEALQQAVEIGVIFASFELVGRDYQGEESSHNR
                     SPAFQILYTTHLDTCSPLYDGEQFAPIPLYSLQDQSLSEAILEWQQNWQACDLLQMNG
                     NLLECHALVQISDETSDLAMIGRDLCQQIEQKTHIPTFYYLYRLGRDESEYQRKCPCC
                     GGEWKLTEPLHDIFHFRCEPCRLISNLSWELL"
     gene            32332..33657
                     /locus_tag="PXD18_000243"
     CDS             32332..33657
                     /locus_tag="PXD18_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine transporter"
                     /protein_id="HDL6300712.1"
                     /translation="MLIFNLIVFAAILFLLAKIYKSTQKLGQTVFIGLFLGLASGAFL
                     QTFYEKATVDATLDWINLIGNGYVRLLQMIVMPLVFVSILSAITRLKEAGSLGKISFS
                     VLSVLLVTTAIAAAIGIALVYLFDLSAEGLVAGSRELAAQEKVVGRVEQVSNLSVPSM
                     LLSFIPKNPFLELTGANPTSIINTVIFSALLGIAALSLGKEDKALGERIAQGVETLNK
                     LVMRLVRFVIRLTPYGVFALMIKMAATSQWSDIVNLGSFIVASYIAIGLMFIVHGILL
                     FVAKINPLDYYKKVLPTLSFAFTSRSSAATIPLNIETQTNKLGNNSVIANFSATFGAT
                     IGQNGCAGIYPAMLAVMVAPTVGMDPFSLNYILTLILVVAISSFGIAGVGGGATFAAI
                     VVLSTLNLPIELVGLLISVEPIIDMARTALNVNGAMVAGTLTNKWVKAE"
     gene            complement(33717..34376)
                     /locus_tag="PXD18_000244"
     CDS             complement(33717..34376)
                     /locus_tag="PXD18_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL6300713.1"
                     /translation="MFNISKQQVLDAFHFRSACRSYDPNKKINKEDMDYILELGRLSP
                     SSVGSEPWKFLVLQNPETRQKIAPVSWGIKHPMEEMSHLVVILTKKNVRYDSVYMRDM
                     LAKRGLTYEQIEASLVRYKSFQEEDMKLLSERELFDWSTKQTYIALGNMMTGAALIGI
                     DSCPIEGFHYDTVNQILSDEGLFDLNEYGVSCMITFGYRNKEIKKKSRKPTEEVIAWI
                     E"
     gene            34605..35591
                     /gene="pheS"
                     /locus_tag="PXD18_000245"
     CDS             34605..35591
                     /gene="pheS"
                     /locus_tag="PXD18_000245"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HDL6300714.1"
                     /translation="MQHLKDLTNKAREALDKIDQNLEALEEFRVEYFGKKGHFTTLMQ
                     ELRNIAAEERPAIGAKINEAKQVVLDVLNAKKEEWEQAVLNAKLANESIDVSLPGRKT
                     ELGGLHPVSITIERVVKFFSELGFTVANGPEIETDYYNFDALNIPDHHPARADHDTFW
                     FDANRLLRTQTSGVQIRTMENVKPPIRIVAPGRVYRNDYDQTHTPMFHQIELLYVDKE
                     ANFTELKGLIHDFLKAFFEEDLQVRFRPSFFPFTEPSAEVDVMRQNGKWLEVLGCGMV
                     HPNVLRNVGIDPEEYSGFAVGMGVERLTMLRYNVTDLRSFFENDLRFLKQFK"
     gene            35639..38026
                     /gene="pheT"
                     /locus_tag="PXD18_000246"
     CDS             35639..38026
                     /gene="pheT"
                     /locus_tag="PXD18_000246"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HDL6300715.1"
                     /translation="MKFNESWLREWVNPAISTEQLCDQITMLGLEVDDVEPVAGAFSG
                     VVVGEVVECAQHPDADKLRVTKVNVGGERLLDIVCGAPNCRQGLKVACAVEGAVLPGD
                     FKIKKTKLRGQPSEGMLCSYSELGIKEDHSGIIELPADAPIGQDFREYLNLNDVAIEI
                     SLTPNRADCLSIAGIAREVGVINRVDVKAPTITDVKATISDKVSVELQAPEACPRYLA
                     RVVKNVNVKATSPLWLQEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDAAKIEGGI
                     QVRMAKEGEELVLLDGTNAKLQSNTLVIADSKGALAMAGIFGGEASGVSENTKDVVLE
                     SAFFAPLAITGRARQYGLHTDASHRFERGVDPELTRQAMERATALLLEICGGEAGEIV
                     EAVSQENLPKRNTVTLRRSKLDSVIGHHIDDATVTDILTRLGLNVTFADNSWTAIAPS
                     WRFDIEIEEDLIEEIARIYGYNSIPNNSPLAHLTMKGTPEKLLEANRIRMALVDSDYQ
                     EVITYSFVDPKKQSLLHPQQEALILPNPISSEMSAMRVSLLTGLLDTIVYNQSRQQNR
                     VRIFEAGLRFIPDSNAESGVRQEFVFGAAIVGDKRPVHWENKSEAADFFDLKGDIERI
                     LSLTSIRHDLQFVAKQFPALHPGQSAAIMLDGKEIGFIGTVHPSIVQKFGIKGKPIVC
                     EILASAIAERPVTQAGEISKFPANNRDIAVVVDESVPAGEVLEACRKAGGNKLVAVNL
                     FDVYRGSNLESGKKSLAISLTVQDNEKTLEENEINAVIQAVLAELATRFNAVLRD"
     gene            38084..38380
                     /locus_tag="PXD18_000247"
     CDS             38084..38380
                     /locus_tag="PXD18_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HDL6300716.1"
                     /translation="MALTKIEIAENLIEKFGLEKRVAKQFVELFFEEIRSSLENGEEV
                     KLSGFGNFSLREKKARPGRNPKTGENVAVSARRVVVFKAGQKLRERVEQASSQS"
     gene            38419..38940
                     /locus_tag="PXD18_000248"
     CDS             38419..38940
                     /locus_tag="PXD18_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL6300717.1"
                     /translation="MKLTKRWLSLGCLLAITAMLVACSSSDTTSKSQVKSKVYRSIYQ
                     SDLSDPIMAISRLSEHQHEWKGTRYRLGGNSKAGIDCSGFMQVTFKDLFGIDLPRTTT
                     EQAKAGERISKDELRTGDLVFFKTGRGPNGKHVGVYVKNGQFLHASTKGGVIYSDLDS
                     PYWSKAFWQARRL"
     gene            38956..39999
                     /gene="degS"
                     /locus_tag="PXD18_000249"
     CDS             38956..39999
                     /gene="degS"
                     /locus_tag="PXD18_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane-stress sensor serine
                     endopeptidase DegS"
                     /protein_id="HDL6300718.1"
                     /translation="MLKKIGQAVIFGLFCAILILFVAPIIQSKGSSFSLSAFTQKEIV
                     SYNAAVKIASPAVVNVYSRNFSSENETFEVKNLGSGVIMSSDGYILTNRHVIEDADQI
                     VIALQNGAISTNVKLVGDDSLTDLAVLKIEGENLPTIPQNPERKLQIGDVVLAIGNPL
                     NLGQSITQGIVSAIGRKTLTESGRQNFIQTDVSINQGNSGGALINTAGELIGINTLRF
                     GKNTNELSEGLNFAIPINLANQIMSKIIKDGRVIRGYFGVSTDLLDTAKMQGYEKGVI
                     IVNVDKNGPAAKAGIQAGDLVLKVGDIEAFSPSQMMEELAEMKPYTTVKVLVQRDEQL
                     LNFDVTITELQTQ"
     gene            40008..40682
                     /gene="cmk"
                     /locus_tag="PXD18_000250"
     CDS             40008..40682
                     /gene="cmk"
                     /locus_tag="PXD18_000250"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HDL6300719.1"
                     /translation="MKKIVITVDGPSGAGKGTLCHALAEKLGFDFLDSGALYRITALS
                     AIKKEVPLDDEEKLAEVGRNLDIQFLPENGEIQVILEGENVGDLIRTAEAGQNASKVA
                     AFPLVREALLERQRAFSSEKGLIADGRDMGTVVFPDAQIKLFLDASAEERTKRRVKQL
                     QEKGFNANFDEILAEIKERDFRDRNRSVAPLVPAKDALLLDSTHLSIEDVINQALNHI
                     AQYIKF"
     gene            40774..42441
                     /gene="rpsA"
                     /locus_tag="PXD18_000251"
     CDS             40774..42441
                     /gene="rpsA"
                     /locus_tag="PXD18_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HDL6300720.1"
                     /translation="MSELSFAQLLEESFAATPRLGDVVKGTVVAIQKGLVIVDTGFKS
                     ESAIDASEFTNAQGELEVQVGDEVDVVLKAVEDGFGATVVSRGDAKRNEAWIALEKAF
                     EEQATVIGFVNGKVKGGFTVELNGVRAFLPGSLVDTRPVRDSLNLEGKEYEFKVIKLD
                     QKRNNVVVSRRAVIETESNQDRDAVLANLVEGSEVKGTVKNLTDYGAFVDLGGVDGLL
                     HITDMAWKRVKHPSEVVNVGDEVTVKVLKFDKDKTRVSLGLKQLGQDPWAVIAENHPV
                     NSKLTGKVTNLTDYGCFVEILDGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLE
                     VDEERRRISLGLKQCKANPWEQFAATHSKNDKVSGKIKSITDFGIFIGLEGGIDGLVH
                     LSDISWNVSGEEAVRNYKKGDEVEAVVLQVDAVKERISLGIKQLESDPFTNFVDGTKK
                     GAILTGKVVEVDAKGVKVELEGGVEAFIRANEATAERVEDITSVISVGDSIEAKYTGV
                     DRKSRVVNLSVRAKNEAEESAAIAQVNKEEVVVPNAFAEAFKAAKGE"
BASE COUNT        12871 a         7793 c         9702 g        12135 t
ORIGIN      
        1 gaaaatttac aaaaattatt taattgaaaa aataagtagc atatagctcc cccaatagca
       61 taaaaaatgt gtaaaatagc aagataacta aatgtttaac ttctatttac aaaaagagtg
      121 atttttaatg aaaacaactt cagatatcag acaatctttt ctagagtttt tccaaactaa
      181 aggacatacg attgttccaa gcagctctct tgttcccgag aatgatccga cattattatt
      241 taccaatgcg ggcatgaacc aattcaaaga tgtttttctt gggttagaaa aacgccctta
      301 tagcagagcg actacggcac aacgttgtgt acgtgcaggt ggtaaacaca atgatttaga
      361 aaacgtaggt tataccgctc gccatcatac tttttttgaa atgatgggga atttcagctt
      421 tggtgattac ttcaagcaag atgcaatcaa attcggttgg gagtttttaa cttctccaca
      481 atggcttggc ttaccaaaag aaaaattata tgtaactgtg tatgaaactg atgatgaagc
      541 ctacgatatt tggcataaag aagtaggtgt accatcggaa catattattc gcattggcga
      601 taataaaggc gcaccttatg cttcagataa cttctgggcg atgggcgata ccggcccttg
      661 tggcccttgt accgagattt tctatgatca cgggcctgaa cattggggtg gcttaccggg
      721 tagcccagaa gaagatggcg accgctatat tgaggtatgg aatattgtat ttatgcagtt
      781 caatcgttta gcagacggta cgatggaaaa actgcctaag ccttctgtag atacagggat
      841 ggggttagaa cgtatgactg cggtaatgca acacgtaaac tccaactacg aaacggatat
      901 tttccaaact ttaattaaag aagtcgctac tttgcttaat gtgaaagatt tagataataa
      961 atctttacgt gtagtggcag accatattcg tgcttgttcc tatctgattg ccgatggtgt
     1021 tttaccttca aatgaaggaa gaggctatgt attacgccgt attatccgcc gggcggttcg
     1081 tcacggtaat attttgggtg caaaagaagc ctttttctat aaattggtgc caacacttgc
     1141 aacggtaatg gggcaagctg gtgaggtgct gacccaaaaa caagcgcata ttcaaaagac
     1201 actcaaagca gaagaagagc aatttgcccg tactcttgag cgtggattga atttattaga
     1261 agaagcatta gcgaaggttg aaaataacac cttatctggc gaagttgcgt tcaaacttta
     1321 tgatacttat ggcttcccgt tagatttaac cgcagatgtt tgccgtgaac gtgatattaa
     1381 aattgacgaa gacggcttca atgcagaaat gaccgcacaa cgtgagcgtg cgaaagccag
     1441 cagtagcttt ggcacagatt ataacaatgt gattaaagtg gacagtaaaa catgctttag
     1501 tggatatact gaaaccagct taaatgatgc tactgtaatt gggttattta gtaatggaaa
     1561 atcggttgag tctattcaat cgggtgaaaa tgcggtagtg attttagata aaaccccatt
     1621 ctatgcagaa atgggcggac aagtgggaga tagcggtcaa atttccgcag aaatttgcaa
     1681 ttttgaggta gtagatacgc aaaaatatgg tcaagtattc gggcatattg ggcaattaac
     1741 ttccggctca ctttctgttg gcgacaaagt taatacgatc gtagatagag agcgtcgtca
     1801 tgctattaca ttaaaccaca gtgctaccca cttactgcat tctgcgttac gccaagtgct
     1861 aggcgaccac gttgctcaaa aaggctcatt agtgtcagaa aatattttac gttttgatat
     1921 ttctcagccg gaagcaatta ctaaatcaca acttgaagaa gttgaacgta tcgtgaatgc
     1981 taaagtgcgt gaaaatattc aggtaatcat tgaagaaatg gatattgaat ctgcaaaagc
     2041 gaaaggtgca atggcgttat ttggtgaaaa atatggcgaa gtagtgcgtg tagtggaaat
     2101 gtcagatttc tcgattgaac tttgtggcgg cacacacgtt aaacaaaccg gtgatattgg
     2161 cttattcaaa attacctctg aaggtgcggt agcagcaggt gtacgccgta tagaggctgt
     2221 cactggtgaa aatgcgattg cttggttgca taccttacaa caagccgttc aacaaagtgc
     2281 tgaattgtta aaagcagaca gtcattcatt cgttgagaaa attgttcaat tacaagagaa
     2341 ggctaaacgt acagaaaaag agcttcaaca gctaaaagat aaacttgcag cacaagcagg
     2401 ttcagattta gccaaacaag ctacccaaat caatggcgtg aatgtagtga ttcaacaatt
     2461 agagaatgtt gaaccaaaag cattgagaac gatggttgat gacctaaaaa atcaattagg
     2521 cagtgcagtt gttgtatttg cgactacggc ggaagataaa gtcaatttga ttgtaggtgt
     2581 gaccaaagat ttaaccgata aagtcaatgc tggtcaatta gttggtgcaa tggctgaaaa
     2641 agtgggaggt aaagggggcg gacgtcctga tatggcaatg gccggaggct cagaaccaca
     2701 acatttattg caagcattgt cacttgctca agaatggatt acagcaaaac tttaaaaata
     2761 ataacaaggc gagctgaact cgcctttaaa actttactct atatttaagt atttatagag
     2821 tttttcactt tttaggagac aattatgctt attctaactc gtaagattgg ggaagtttta
     2881 ctcgtaggag atgatgttga gattacggta ctcagcatcc gaggaaatca agttaaatta
     2941 ggtgtgaatg caccaaaaga aatctctgta caccgccgag agatttatga aagaataaaa
     3001 gcctcagtag aagaggaaaa tgcggaataa gcattttaac tgtaaagctg ctagatgata
     3061 acagcgaagc aggcaatgca aaattttctg aaaattgacc gcctgttatg tctaagcggt
     3121 ttatttcagt tatatctaat atgttaagtc atcaaaggat tccaaatgaa agtcattatt
     3181 cctgttgctg gattgggaac gcgcatgtta cccgcaacca aagctattcc aaaagaaatg
     3241 cttatccttg cagataaacc tcttattcaa tacattgtaa atgaatgtgt ggctgcaggt
     3301 tttaaagaaa ttgtattggt tactcactct tcaaagaatg ctatcgaaaa ccattttgat
     3361 acctcttttg aattggaaac gatgctggag aaacgagtaa aacgtcaatt attagatgat
     3421 gtacgttcta ttgtaccaaa agatgttacc ttaattcacg ttcgccaagg gcaagccaaa
     3481 ggtttaggtc atgcggttct atgtggacga acagtggttg gcgatgaacc gtttgcggtt
     3541 gtattaccag atgtattact tggtgaattt acagcaaacc aaaaaacgga aaatttagct
     3601 gcgatggtga agcgtttcca agaaaccgga tatagccaaa ttatggttgc gccggttcca
     3661 atggaaaatg taagtagcta tggggttgct gactgccatg gtgtagatat ccctctcggg
     3721 ggggcagcgc ctattgcgaa aatggttgaa aaaccaagta ttgaagaggc gccttctaat
     3781 ttagcggtag taggacgtta tgtattttcc tcaaatattt ggaatttatt agaaaaaacg
     3841 ccagtaggcg taggtgatga aatccagctg acggatgcaa ttgatatgtt gattcaccaa
     3901 gaaacggttg aagcttttca tatgacaggg cgctcatttg attgtggtta taaagtcggc
     3961 tatatgaaag catttgtaga atatagttta aatcatgaca aatgcggaaa agaatttaaa
     4021 gcatttatta aagagttagc taaatcactc taagccttag agtttagact atgatctaag
     4081 gggctgtgtc tgatattcta ttggatccag tcttttctat ttatggtatc ataaattagc
     4141 gtagtgataa taaattttcg gattcattta cctttaaaat actttttgca aaaaatcacc
     4201 catatttgac cgcttatatt gttcatttct cttgtctgcg ttttatccat tcccattttg
     4261 attacattca gttacaataa ataccatttt tgtatagaaa ttaaagatta agcccgtatg
     4321 cagaacgaat tggcacagac tattccagaa ctcatctctt ggacgaaaga tcgtgaattt
     4381 tcactttcgc tttcttccga ccgcttagcg tttctacttg ctatctctat ttataaccaa
     4441 gaacagacag atggtgaatt gttagaaagt gatcttattg atcttttccg ttatgtttca
     4501 aattcgtttg agcaatctga tgccactttt acccagcgtg ccaataatgc gattaatgat
     4561 ttagtcagac aacggttgtt aaaccgtttt agtagcgaat ttacggaagg tttggcgatt
     4621 tatcgtgtta cgccgttagg ggtgggaatt tcaaattatt acgttcgcca gcgggaattt
     4681 tctaccctgc gtttatcgat tcaactttcg attgtggcag atgaaattca gcgagcttca
     4741 gtagcagcgg aagagggaat agagcaggca caagatgaac gtttttggcg aaataatgtg
     4801 tttgccccat tgaaatattc ggtggcggaa atctttgaca gcatcgatct ttcacaacgg
     4861 attatggacg aaaatcagca ccaaatccgt gaacgaatag ccgaactgct tagccaaaac
     4921 tggcacgaag caattatgag ttgtgagcaa ttgttagacg aaacctcggg gaatttgcgt
     4981 gagttgcaag ataccttaaa tgccgctggt gataaactgc aagctcaatt attgcggatt
     5041 caaagttgcc tgatggctcg taatgatttg gattttatcg atcagctgat tgtgaatcta
     5101 caaaataagt tagaccgtat tatcagctgg ggacaacaag ctatcgatct ttggatcggc
     5161 tatgaccgcc atgtgcataa atttattcgt acagcgattg atatggacaa aaaccgtgta
     5221 ttcgggcaac ggttacgcca atcgattcaa gattattaca acagcccttg gttgctttat
     5281 actgcaaaag ccgattcgtt actggacttg cgtgatgatg aagcaatgtt aaatgaggca
     5341 gaatcggtgg gcgagttgcc aagtgagtta gagtatgagt cgctttcaga tgtgcaagag
     5401 caaattgttt cggcaatgca agctcattta gcgccgttcc gtgctgaagg taaaccgata
     5461 gatttaggcg ttatcttgcg tgaacagctt gcccgattcc cggaatcccg ccattttgac
     5521 gtggctcgta ttattgtcga tcaagctgtt aagttaggta tggcaagcca agatagccaa
     5581 gccgtttacc cacaatggca gccgattaac gagcaagggg cggaagtgca ggcgaatgtt
     5641 atcgaccaat acaataaata acaagcggtc gtttttaccc agaattttgc aaaattgaag
     5701 agaatgacaa tgacagagaa tatccaagat ttcatttccc cgaaactggc acttgcgatt
     5761 gccaacccga tttttccgga gctagacagc caattacgag ccggtcgcca tatcaatacc
     5821 gagcagcttg accaacacgt ctttttgatg gattttcaag cggaactaga gagtttttac
     5881 cgccgttatc acgttgagtt gattcgagca ccggaaggct ttttctacct acgcccgaaa
     5941 gcctcgacac taattgcccg ttcggcaatg tcagaaatgg aaatgttagt gggtaaggtg
     6001 ttgtgctacc tctatttaag tccggaacgt ttggctcagc aggggatttt cagccaagat
     6061 gatgtgtatg aagaattact cagtcttgcc gatgaaagca aattattaaa agcggtaaac
     6121 ccacgttcga ccggttccga tttagaccgt gccaagctgg cagaaaaagc cggcggagcg
     6181 ttacgcagat tagcccgtat cggcattatt acccgagtag gcgagcaaaa cagcaaaaaa
     6241 tttgtgattt cagaatcggt cttccgtttt ggggctgatg tgcgtaccgg tgatgaccca
     6301 agagaggcac agcttcgctt aattcgtgat ggtgaagcga caacccctgc gttgttaaac
     6361 gaacaagcgg ttgaaataga tgaaaatatt gcagatgaag ccccctttga cggagaaaat
     6421 gagtgatttc attcgaatag attcagcatt taatgagtct gccctagaca cggtaaagcc
     6481 gaactaggtt aagcataaag cagccctcca aggctgaggt tgcgattaga gtagcggagc
     6541 tactcaccta tacctaacct agtacgcttt agcgtgctag gacaattagt gagaaaacat
     6601 aatgattgat accacagaat tgcaaaataa tcctcaaatt gcaccgcttg cacgcccgaa
     6661 tgatgtacaa cgcggtaaat ttctctcttt aacgctgatt aactggaacg gtttttttgc
     6721 tcgaaccttt gatttagatg acttagtgac cacgctttca ggcggtaacg gggcaggtaa
     6781 gtccaccaca atggcagggt ttgtgaccgc cttgatccca gatttaacct tgcttaattt
     6841 ccgtaatacg actgaagcag gctcaaccgc cggttctcgt gataaaggct tatacggtaa
     6901 gttaaaagcg ggtgtttgct atgcggtgtt agagtcattc aattcccgtg ggcaacggat
     6961 tattaccggc gtgcgtttgc aacaaattgt cggacgggat aaaaaagtcg atattcgttc
     7021 gttctcgctc cagaatattc ctcaagagca aagcattatc agcctactga ccgaacaagt
     7081 ggggaataag gctcgagtgc tggcgttaaa tgaactcaaa gatcaatttg agaacagcga
     7141 agtccaattc aaacagtacc attcgattac tgattaccac agttttatgt tcgatttggg
     7201 cgtaatccca aaacgccttc gttcggcagc cgaccgtagc aaattctaca aattaatcga
     7261 agcctcgctt tatggtggta tttcaagtgt gattaccaaa tccttgcgtg attacttgtt
     7321 gccggaaaat acgggcgttc gccaagcgtt ccaagatatg gaatccgctc tgcgtgaaaa
     7381 ccgtatgacc ttagaggcga ttaaggtcac gcaatcggat cgggatatgt tcaaacgctt
     7441 aattaccgaa tcgaccaatt atgtgtcggc ggattatatg cgtaatgcga atgaacgccg
     7501 tggcaatgta caacaagcct tagagcaacg caaagagtgg tatgcggcaa aatccaaaat
     7561 tttgctcgaa cagcaacgct ttgtggaatt tagccgtgaa agtgcggata ttgccgaagc
     7621 agagctggcg ttagaggcgg attacaatag tgcgaacgat catctaaatt tagtgatgaa
     7681 tgcgttacgc caccaagaga aaatcgaacg ctaccaagac gaagttgaag agctgaatat
     7741 taagctggaa gaacagcaag aggcattgga agaaattgcg gaaattgccg aaaatgctca
     7801 ggctcgtgcg gatgaggcag atgatcacgt tgaagaattg cgttctcaaa tggcggatta
     7861 ccaacaagcc ttagatgcac agcaaactcg tgcattgcaa taccaacaag cggtgaatgc
     7921 gttagaaaaa gccaaacagc taaccggctt agtgaattta gatttaaata atattgaaga
     7981 ttaccacgca gaatttgtgg ctcaagccga agatcttacc gatcaagtat ttgagctgga
     8041 acaacgttta agcgtgtcgg atatggcgaa aacccaattt gaaaaagcgt ttgaattggt
     8101 ttgcaaaatt tccggtgaaa ttgaccgctt gcaagcgtgg gaagaggctc gtgcgttact
     8161 ttctgccttc cctgagcaaa aaatgcaagc tcagcaagcg gtgagtttac gtcaaaaact
     8221 caacgattta gaacagcgtt tgcaacaaca gcaaaatgcc cagcgtttag tggcggaatt
     8281 taaccaaaaa tcgcaacaac aactcaattc agcggaagaa ttagacgcct attttgaaga
     8341 gcagcaagct cgcctagaag atttagaggc agagctttcg gactttgtag aacaacgttc
     8401 aacccaacgc caacaacgtg aacagcttaa tcaacaatat cagcaattag cgaagaatgc
     8461 accggcttgg catacggcac aatcggctct gactcgttta gaagagcaat gtggcgagaa
     8521 gtttgaagcc agccaatcag tgatgcagtt tatgcaaaat atgctgagca aagagcgtga
     8581 agccaccctt gctcgtgatg aattggctcg taaagaacaa atgcttgatg agcaaattaa
     8641 tcgcttaagc cagccggacg gctcggaaga cgcccgctta aaccagttgg cagaacgttt
     8701 tggtggagtg ttactctctg agttatatga tgatgtatca attgaagatg cgccttattt
     8761 ctccgcctta tacggcgagg ctcgccacgc tattgtagtg cgtgatttag aggcggttaa
     8821 aacacagcta gagaaattag acgattgccc aagtgatctt tatttaattg aaggtgatcc
     8881 gtccgccttt gacgatgcgg tatttagtgc cgaggaatta ggcgaaggcg tggtggtgaa
     8941 agtctccgat cgccaatggc gttattctaa attccctgaa gtgccgttat tcggacgtgc
     9001 tgctcgtgaa aaacatttag cgactttaaa agcagagcgt gatgaaaccg cagaaaaaca
     9061 cgctgaacgt gcctttgatg tgcagaaatg ccagcgttta catcaacact taagccaatt
     9121 tatcggcacg cacttaaatt tagcgttcca agaaaaccct gaaatgttaa tgcaagagat
     9181 tgcggcagaa cgggcagaaa ttgaacgtga attggcacaa tcagccggta acgaacagca
     9241 attacgtcac caattagaaa gcgtaaaagc ccagttgcaa atgttgaata aaattctacc
     9301 gcttgcgaat ttattagccg atgaaacgct ggaagcacga gcggaggaat gtcgtgagca
     9361 attagaattg gcagaagaag atgaaatgtt tatccgccaa tttggagcaa cattaagcca
     9421 acttgagccg attgcagccg cattaaaaag tgatccggct ttatttgaac agttggaagc
     9481 cgattaccgc cgttcagttg ccgagcaaaa agtgttacag caaaaagtgt tcagcttggc
     9541 tgatgtaatg aatcgccgcc tccattttag ctatcaagaa acggtgggta cagaaggctc
     9601 tgcattaacc gaacagctac gccaacgttt ggaaaatgca caacgtgagc gtgaacaggc
     9661 tcgtgatcag ctgcgtcaag ctcaagctca actttcacaa tataaccaag tattgaccgg
     9721 cttacgcagt tcttatgagg cgaaaaacca aatgctacaa gagttaattc gtgaaattga
     9781 cgatttgggc gtgcgtggtg atagcggagc ggaagagcga gccagattcc gccgtgatga
     9841 attgcaacaa cgtttaagcc agcaacgttc ccgcaaaggt tatttagata aacaaattgc
     9901 ggtgatcgag gcggaaatgg ataaccttaa ccgcacctta cgtaaagccg aacgtgatta
     9961 tcatacacaa cgtgaattgg tggtgcaggc aaaagccagc tggtgtattg tgcaacgttt
    10021 atctcgtaac agcgatgtgg aaaaacgttt aaatcgccgt gaattggctt atcaatcggc
    10081 tgaagaatta cgttcgattt cggataaagc tctcggggca ttacgcaccg ccgtggcgga
    10141 taatgaatac ctgcgtgata gcttgcgggc ttctgaagat agtcgcaagc cggaaaacaa
    10201 agtggcgttc tttattgcgg tttatcagca tttgcgtgag cggattcgcc aagacattat
    10261 caaaaccgat gatccgattg atgcgattga gcagatggaa atcgagcttt cacgcttaac
    10321 caatgaatta accggtcgtg agaaaaaact ggcgatcagt gcggaaagtg tggcaaatat
    10381 tttacgtaaa accattcagc gtgaacaaca acgcattttg caactgaacc aaggtttaca
    10441 aaatattgca ttcggtcagg taaaaggggt gcgtttggtg gtgaatatcc gagatacgca
    10501 cgctatttta ctcaatgcgt tatccaataa tcgtgaggaa cacaaagatt tattcgacag
    10561 ccaaaaactg agcttctccg aagccttagc gatgttgtat aaacgggtga accctcatat
    10621 tgagatgggg caacgtacac cacagaccat tggtgaagag ttattggatt accgtaacta
    10681 cttagattta gaagtggaaa ccttccgtgg tgcagacggc tggatgcgtg cagaaagtag
    10741 tgcattatcg accggtgagg cgatcggtac aggtatgtcg attctcttaa tggtagttca
    10801 aagctgggaa gaagaagctc gccgtatgcg tgccaaagat attctaccgg ctcgcttatt
    10861 gttcttagat gaagcggctc gattagatgc tacctcaatt aatacgctat ttgaactctg
    10921 cgaacgtttg gatatgcagt tattaattgc agcccctgaa aatattagcc ctgaacgagg
    10981 cacaacttat aaattggtgc gtaaaatcac caataaccaa gagtatgttc acgttgttgg
    11041 tttaaaaggc tttgctaaat aaaacttagc actttaatct aaatatgtat aaaaagattg
    11101 ttgatggaaa cattggcaat ctttttattt tcagaaattt ggaaatttga ttttgttttt
    11161 acatttattt ttaaaatttt gaaaataaat gtgtttttct cggatttaat taatatgaaa
    11221 cttgctcgaa aagctcaacg gagattatcg ttccttagag tatttagtct tgcctttgcg
    11281 gcttttatag taaacaccac cgaatttatt cctattgcat tgctttcaga cattgcaagc
    11341 agtttccaaa tggagccttc atcggcaggc attatgatga cggtttatgc gtgggtggta
    11401 tttttattat cgttaccgtt gatgttactc acggcgaata tggaaagaaa acggctgttg
    11461 ctgatgttat ttatgggcga atgatcgggc aagccttagg ctggcgggca acctttggca
    11521 ttattgggat tatcgctttg attgtgctaa tgatgatttg gcggttgctg ccttatttac
    11581 caagcaaaaa tgcaggctcg ataaaaagtt tgcctttgtt atttaaacgc ccgatgttaa
    11641 tcggcattta tttgctggtg gcattgatcg tttcaggaca ttttaccgct tacagctata
    11701 ttgagccgtt tatgattaaa atcagttcgg tgagtgtgga aaacaccacc tttattttgc
    11761 tggtttttgg cttggcaggt gtggtggcaa gttttttatt tggtcggtta tatggcaaag
    11821 ccccgaataa atttatctta agcgggatcg ccattattat gtgcagccag ctttgtttac
    11881 tgtttttgag tgactcaaca gtggcaatgt ttatggtcgc ttttgtctgg ggaattggca
    11941 ttaccggaat gagcattgcg ttgcaaatga aggtgcttga acttgcccct gatgcgactg
    12001 atgtcgcaac tgcaattttt tccggcactt ataatttagg cattggcggt ggagcattac
    12061 tggggagcat cgctattcag caactgggat tagccaatat cggatttgcc ggtgggagta
    12121 ttgcttttgt agcaatggtt tggtttgtat ttgttagctt gaaatataga cagctcagat
    12181 agtgacaagc ggtcatattt tgctgaaatt ttgcaaattt tcctgcaaaa atgaccgctt
    12241 gttgaacatt acttttcaat aaattgattg ctttgttgaa tcatttgtaa gaacaacgct
    12301 aatggtggtc gagcatcttt ctcgtgttcg ccattgctgt taaagtgctt aaagttgcct
    12361 ttacgatcaa tttgatattg atcgccattc ggcataatcg ccacattcca tttgtgatta
    12421 gaactggata cccataaacg ttggttctgg gtgcttaaat ccataccttg tgcataatca
    12481 ttcagcggat tttgcacgcc gaagaattgg ctcagtaagg ttggcataat atctaaatgg
    12541 cttgaaagga aatggtactc tttgctttcg ccttgccagt agaacatcat cggcacttga
    12601 atgtgttgtt tatcgaagct attttctgct ccaacttcat tactaatatc ggcggtaatg
    12661 attaccagcg tattcgccaa tagtgcattt tgggtcaaat gttgccagat ttcagcgaat
    12721 tgccaatcta ataattttgc ctgctcttga gcggtgtggg cgaagggcat tcttaagtct
    12781 aaatagctaa agaacggatt ttccaatgag cgagagctga tccagttttt ccattgccca
    12841 atcgccccta cattactgtg cgccgtaggc aataaaatac cagagaagat cgcctgatga
    12901 taaatcgggt cggcaaaacc attatgtgaa aacagcccta attgatagtc cgattttcta
    12961 gcgatttcga taagcggtga cacggtttta tcggctaaaa cggaatccaa atatttaccg
    13021 cttaaactgt aaaatagacc taatgcaccg gcagaggctg aatcaccact actgtaatgc
    13081 tgcataaagc ggtggctttg ttggctgatt tctgtcagct taggcattgt ttcggcattt
    13141 attatctgtt tagataaacc tgataaatta atcagtaaaa tattagttga gggcgttttg
    13201 gtcgcaatca agggagattt tggataattc agatagaaag tatctagtct gccactttct
    13261 tcaatttctt gattaaattc tactcggtca ataaaaccgt gtttttctaa gaaattacga
    13321 gccgtcatcg ggtaagaaag tgggtagttt gctcgttgag cggtaatcgg gcggtaggca
    13381 ttcatatctg cccacgcata gattaaatga gtagcggtaa agctgatcac gaaaaagaga
    13441 gcgacatatt tgccccattt ttggcggcta aaactacgca gtttctgcca gcaccagcga
    13501 gagtagagca tttctgccag caaaaggagt ggcattggta caaacagcag ttgccattta
    13561 cgggtcagtt ccccttcttc cggattaact aacagatccc atacaagcgg tgataaatgc
    13621 agataaaatt gcttgaagac ttcagtatcc accaataaca cggtttgccc gatggtggct
    13681 aaaatcacgg aaagcccacg ataggtgcga tgattcttaa caataaaact gagcggaaac
    13741 agaattaata gaaatcctgc aaagaccaca aagctgaaat gcccgaacag gctgacaaag
    13801 aaataaagtt tgcctacaag cgtgttcggc cagtctgcat taaatgcgta acgagaggaa
    13861 atgagtagtg ccaacacaat attaaatagt gcaaaccaat gcccccacgt gattttctgt
    13921 gaggtttctt ctcgatattg gcgagaattg gtcggcaata aactgcgtag gcgtgcaaac
    13981 atcatcttat ttggttttta gtgattgttt taatgcatcg gcaaaggcat cagcgagagc
    14041 ttctctttgt gccgggcttt gaatattttc aattaaaatg ttagttatca tattgcctaa
    14101 tgccattaac gataaatcca ccggtgcttt atgcttttct atggtggcga tgaggtcagc
    14161 caatagctgc tcaaattgtt tggtgtggta tttagatttc gttgccatat tgaaataaag
    14221 atgatcctat aattaggtac aaatagtagc acaaaaataa taataaagta gcgttaagcg
    14281 ttattgtttg agtgattttt gcaaagtttt agccaaaaat gaccgcttgt tcaataaatg
    14341 aggaattttg caactatttt attttaattt gataggtgtt ttctgctttc ttttttcata
    14401 aaaaaagcta taatgaacgg ctgttcatta taggtaagga gataaaatgt ctaggcgaag
    14461 cgagccaaaa gaagagatgg taaaccgtat tttatcggca accgagtcgc tgattgtgca
    14521 agaaggtttg caaaaccttt caatgcgtag tattgcaaaa gaagcaggga tcgcttccgg
    14581 tacattatat ctttacttta aaaccaaaga tgatttattg cactcattgg ctgcccaatt
    14641 actcgaatgt tataacggtt atatgcattt tgagtttaag cctgaaatgg cgttatttga
    14701 gcaatataaa gcgttggtca ataaaaaatg gcagttttta atcgagcgtt tagatttggt
    14761 aaaacagttt caagcggtga tagggattga tgaattgatt cgggaaacca tagctgatga
    14821 aacttccttt tggaataaat taattttaga agggaaaaag caaaggatta ttgctgatct
    14881 atctaatgag ttgctttatg gattaagcat cggcacattg gtggatatcc aatatctgca
    14941 aaatctgaat caagaaaatc agtttgatgg atatttagac gagattattt tacgcacttg
    15001 gaaagcaatc actttttaag tttcttttta ttagttttat ggagaatgta tgacaacgga
    15061 aacacagaag ctgggtaaag gcagaaagtt tttaattgta ctcacattgt taatcgtatt
    15121 gattgtgttt gctgcaatcg tagggttaca aaaaatcggg gcaatgaaaa aagccgaagc
    15181 agcggcaaat atgccggagg cggtgagcga agttactgct atgcaagtga cgacccaaga
    15241 atggacacca accatttctg cggtcggtta tattcgccca aatcaagggg caatgttaag
    15301 tgctgaaact tcaggcgtgg ttagccgtgt tttggtcact tcaggacagc gtgtgaaaaa
    15361 aggtgatctg ttagtagaat ttgacagcag tgttgaaatt gctaacttga gagcctctga
    15421 agcgcaatta ccgaatgcca aagcaaattt agagcgttac cgtaatctga ttgcctcaaa
    15481 cagtgcttct aaagccgagt ttgataatgc tcaatctacc tacaaccaat tattagccaa
    15541 tatcgaggca ttgcgtgcta cgattaaacg ccgtcaaatt tatgctccgt ttagtggttt
    15601 agcgggtatc gtgaatgtga atgttgggca atacattaca atgggtacgg aaattgtgcg
    15661 tgtggaagat caatcttcaa tgaaagtacg ttttaccttg ccgcaaacta atttagagca
    15721 aatctcgatt gggcaaaaag tgacagccgt aattgatgcg ttaccggcac aaaccttccc
    15781 agctaaaatt gtggctattg atccggctgt ggatcgttta accggcttaa ttaatgtgga
    15841 agcggtgatt gaagaagggc aggaaaaatt gctttcaggt atgtttgccc gcttaaatgt
    15901 tgctttacca acagaaaccg gacaaatcgt cgtaccacaa atttctatcg cttacactat
    15961 gtatggtgaa acggtatatg tgctgcaacc attatctgat gaagataaag aaatggtgaa
    16021 caaaatggcg gtacaaaacc caagtttaga tgtaaacaaa atgtaccgtg caaaacagat
    16081 ggaagtgaaa acggctgacc gcaaaggaaa ctattcacaa ttatccaaag gcgtgaaagc
    16141 aggtgatctg attgtaacag gcggtttaca acgtttaagt aataatgcgt tggttaaagt
    16201 ttctgataca gaagccgtag gcattaccac accggcgaaa aacagtaaac tgtagtggag
    16261 tgagttaagt gaaatttact gacatcttta ttaaacgtcc tgttttggca gtttgtatca
    16321 gcctattgat tacgatccta ggcttgcaag caatcgaaaa attgcaggtg cgtgaatatc
    16381 cggagatgac ggtctcgatt gtaaccgtga gtgttaacta ttcaggtgca gatgcacgtt
    16441 taatgcagac actggttacc tcacagttag aagaggctgt tgctcaagcg gataatattg
    16501 actatatgac ttcatcaagc tctccaagta ccactacggt aacggcaaaa atgaagttaa
    16561 ataccgatcc gaatgccgca ctttccgata tttcggcaaa agtgaatgcg gtacgctcaa
    16621 atttaccgag cggtattgat gatccgtcaa ttagagtctc aaccggttca aatgatgcgt
    16681 taatgtatat ccgatttgtc tctgatgaac ttaatacatc acaagttacc gattatatta
    16741 accgtgtagt aaaaccacag ttctttacgg taaatggtgt ttctagcgtt gatgtgtatg
    16801 gctctgtttt tggcttacgc atctggcttg atccggataa aatggcgagc aataacctat
    16861 caggggcggc tgtattatcg gcattaagtg ccaataactt gcaaaccgct gcgggtaatt
    16921 ctaacggtta ctatacggtt tatagaaaca aagtactttc taccacgcct tctgtgacag
    16981 agttagaaga ggttacggtt tcaaccacca aagatggaaa aaccatcaaa ttaaaagata
    17041 ttgcgactgt tgagctggat aaataccaag atgcagcaag agcaacggtt ggcggtaaag
    17101 atgcagttgt gcttgctgtt tcggtagccg caacggcaaa ctctttaacc gtagcgaaag
    17161 atatttatcc gatgtttgag caggtattaa aaaatctacc aagcaccatt caaggagata
    17221 ttgtttacga taaaaccatt gcgattgata gttctatcaa agaagtaatt aaaactattg
    17281 gtgaggcaac cgtcattgta ttggtagtaa ttatcctgtt cttaggttca ttacgagcaa
    17341 tgattgtacc ggtgattacc attccgattt ccttaatcgg ggtattattc ttcctgcaaa
    17401 tgtttggttt ctcgatcaac ttgcttactt tgctggcgtt ggtattagcg atcggcttgg
    17461 tagtggacga tgcgattgtc gtacttgaaa acgtagaacg tcacgttaaa gaaggtaaaa
    17521 cgccatttga tgcagcgatt atcggtacac gtgaaattgc tttaccggtt atttcaatga
    17581 ctattactct gggtgcagta tattcaccaa tggcattaat gaccggggta acagggacac
    17641 tatttaaaga gttcgcttta acgcttgccg gtgcggtatt tatttcgggg attgcggcat
    17701 taaccctttc gccgatgatg tctagccgaa tattaaaaga acataaagaa ggggaagagt
    17761 cagcatttgc ccgcgtggtg catagatcac tagataaaat gaccagctgc tataccaata
    17821 tgctaagcgg tattatggct gttcgtggtt tcgtcttatt ctttgcggtg ctgatcttcg
    17881 ccagtttacc gatgttattt ggctcacttt ccagtgaagt tgcaccgaca gaagaccgtg
    17941 gctttgtggt tggtatttct aatggacctt caaacaccaa tttagattat accgaagcag
    18001 cgttagccca atttaatcag gaagtaacta aattacctga agtatcttcc ttaatgacag
    18061 tttcaggctt taatggtgca aatagtgcat tatcgattat tgcattaaaa gattggaatg
    18121 atcgtagccg tgaacgtgct gcgatttcta atgatgtggc tgcaatcggt aaaaaagtgg
    18181 tgggtatgga cgtgaatgca attgcattcc ctgaaatttc aaccggtgaa aatggtctac
    18241 cattctcatt agtgattact accgctgata gctatgaaaa attggcaatc gttgcctctg
    18301 aattcttgaa aaaagcccaa acttccggtc agttcttctt tgcgaattta gatttgaaat
    18361 ttgatacggt cacgatgaat atgaaattcg accgtgaaaa aatgggtgct tatggcgtga
    18421 caatgcagca ggtgagtggc acattagggg cattcttatc cggtgcgatt attactcgtg
    18481 tcgatattga ctctcgtgct tacccgattg tgtcgcaagc ggtgcgtaat gatcgtttaa
    18541 atcctgaaga tttaatgaat tactatgtca cgactgcaac agggcaatct atcccgttag
    18601 gttcatttgt gacgatggaa ttaaaaacat caccatcttc tttacctcgt atgagccaat
    18661 taaactcggc caccattggt ggggtagtat ctggctcaat cggcgatgcg gtaaattggg
    18721 cgaaagcaga attagatcgc actttaccat caggttatca atatgacttc cgtggtgaat
    18781 ctcgccagtt cgttcaagaa ggtaatgcga tggcaatgac tttcgctcta gcagttatca
    18841 ttatctatct tgtacttgca attcaatttg aatcttggcg tgacccatta gtaattttgg
    18901 tttctgtgcc gttagctgtg agtggtgcat tgttggtaat gaacattcca accgcaatga
    18961 aaggcttgtt tatggggatt gcagcaggca ctggctcgaa agatatgatg gcattcgcca
    19021 acggtatttg gacggcaggt tataccttaa atatctattc acaagtaggt ctaattaccc
    19081 ttgtcggctt aattactaaa cacggtatct tgatgtgtga agtggcgaaa gaagagcagt
    19141 tactgcacgg caaatcacgc tatgaagcta ttttccacgc agccacgatt cgtttacgcc
    19201 caattatgat gacaacggca gcaatgattg caggcttaat tccgcttctg tttgcggtgg
    19261 gtgccggtgc aatcgcccgc ttcagtatgg gtatggtaat cgtagcaggc ttggcaatcg
    19321 ggacattgtt tactctgttt atcttgccgg ttatctacac tttcttaggg caagaacaca
    19381 agccattacg tgaatttgac gaggaaaaat atttcccaac gacaaaagaa gcatagtttt
    19441 aaatagcaaa agagcgtagc gatacgctct tttttgttgg cttacaagcg gtcgtttttt
    19501 atttattgtt tgctaaaaaa tcacaaaatt taaccgcttg aaagtatatt ttcagatagc
    19561 gtaaacgttt ccctatttac agaaacctag ttcctctgta taatccgctc gcaattttcc
    19621 agtacagatt ttcaatttaa tcatttttta aggaataatt gcaatgctac gaattaaaca
    19681 agaagccctc acttttgatg atgttcttct cgtcccggca cattctactg tgcttcctaa
    19741 tactgctgat ctttctactc aattaactaa aaccattcgt ttaaacattc cgatgctttc
    19801 tgctgcaatg gataccgtta cagaaactaa gcttgcgatc tcccttgctc aagaaggcgg
    19861 cattggtttt atccataaaa atatgtcgat tgaacgccag gcagaccgtg tgcgtaaagt
    19921 gaaaaaattt gaaagtggta ttgtttctga gccagtgacg atttctcctg atatgacatt
    19981 agcggaattg gctgaattgg tgaaaaagaa cggttttgca ggctatccgg tgattgatga
    20041 aaaccaaaat ttagtgggaa ttattaccgg acgtgatacc cgatttgtca cggatttaag
    20101 caaaacagtg cgtgaattta tgacaccaaa agaccgttta gtgacggtaa aagaaaacgc
    20161 aagccgtgaa gaaattttcc acttaatgca cgaacaccga gtggagaaag tgctggtagt
    20221 gaataatgaa tttcagttaa aaggaatgat taccctaaaa gactaccaaa aagcggaaag
    20281 caaaccgaat gcctgtaaag atgagtttgg gcgtttgcgt gtgggggcgg cagtgggagc
    20341 cggtccgggc aatgaagaac gaattgatgc tttagtaaaa gcgggtgtcg atgtgctatt
    20401 aatcgactct tcgcacgggc attctgaagg tgtattacaa cgtgtgcgtg aaacccgtgc
    20461 aaaataccct gatttaccga ttgttgccgg taatattgcc actgcagaag gagcgattgc
    20521 gttagctgat gcaggagcca gtgctgtgaa agtaggaatc ggcccgggtt caatttgtac
    20581 caccagaatt gtaacaggcg ttggcgtgcc acaaatcacg gcaatcgcag aagcggcagc
    20641 tgcgcttaaa gaacgaggca ttcctgtgat tgctgatggt ggaattcgtt attcaggcga
    20701 tatttcaaaa gctattgccg ccggtgcaag ttgcgtaatg gtcggttcga tgtttgccgg
    20761 cacagaagaa gccccgggtg aaattgagct ttatcaaggc agagcattca aatcctaccg
    20821 tggaatggga tcattaggtg caatgagtaa aggctcgtca gatcgctatt tccaatctga
    20881 taatgccgcc gacaagctcg taccggaagg gattgaaggg cgtatcgctt acaaaggcta
    20941 cttgaaagaa attatccacc aacaaatggg cggcttacgc tcctgtatgg gattaaccgg
    21001 ctgtgccact attgaagaac tccgcaccaa agcagaattt gtccgcatta gtggtgctgg
    21061 tattaaagaa agccacgtcc acgatgtgac aattaccaaa gaagcaccga actaccgaat
    21121 gggttaatag cctttctcac tctctcccct tgtgggagag agaccgtttt aaattacgtt
    21181 cagtaattta aaacagagag agggaataag tggttagatt ttcttaaaat tttacaaaag
    21241 aggctatatg ctccaagcta tcatttttga tatggacggc gtgattgtgg ataccgaata
    21301 tctggaattt tccttacaaa aacagtttat tgaagacatc aaagaacaca gccgcccgat
    21361 tactttagaa caacaatcgg aagtggtagg caaatgttta aaagaaattc cggtgattat
    21421 caaaaaacta agcgaatcca gtttgccgat tgaggaaatt cgtgcacgtt actacgcctt
    21481 tttccaagat ctgtttagca aagtggattt taaaaccatt ttcagagccg atattcagca
    21541 aattattcaa tttgccaagc agaatcaaat taagcttgcg gttgcctctt cttccgccct
    21601 ttcgcatatt gaaaatattc tcacggtttg cggcattaaa gacgaatttg atttaatcgt
    21661 cagcggtgaa cagtttgaac acagcaagcc agacccaacc atttaccgct acacctgcga
    21721 aaaattaggc gttgagccac aaaatgcagt ggcgattgaa gactcctact acggaatgct
    21781 cgccgccaaa accgcaggct taacggtgat tggttacgaa gaaaaacgaa tactgattga
    21841 ccaaagttta gcggattata tgggcaaaga tatgaaagag attttgaaga ttcttcaaaa
    21901 atgtaatact ccaagttaat aaacggtcga tttttataga aattttgtca atgtttctac
    21961 ttcaagtact tggaacagtc tatcggcttg agtaacctag aaatgagagt ggatatttta
    22021 atattaatag gataaataga atgaaaaaat taagtttaat ttcaatcgtc gctttatctg
    22081 cgtgcagtat tttcggacca tcttattcag gagaaacaac ggccagtcct ttattaaagt
    22141 tggacacaga aagaaatata aatctgtatt ttcaagcaat acataaatgt actcctgata
    22201 aaattcatac aaaaatcatc aatattccaa gtgaaggtaa tgcaaaagaa ctttggactg
    22261 caacaggttg taataaaacg caatctttta ttattacata tagaaacgat ggggtaggcg
    22321 gcacttttat taacatgacc acaacgccat aatttaaagg aaattacaat gacaaacatc
    22381 caccaccaca aaattttaat tttagacttc ggttcacaat atactcagct tatcgcacgc
    22441 cgtgtgcggg agattggggt ttactgcgag ctttgggctt gggacgtaac ggaagagcag
    22501 atccgtgaat ttaacccaac ggggattatt ctttcaggag gtcctgaaag caccactgag
    22561 gaaaacagcc cacgagcgcc ggagtatgtg tttaacgctg gtctgccagt gctgggcatt
    22621 tgctacggaa tgcagacaat ggcgatgcag ttgggcggtt taaccgaaac gtccgaccac
    22681 cgtgaatttg gctatgcctc ggtggctctc aaatctgccg atcaactttt tgcaaattta
    22741 aacgatgatt tgaccgcttg cgagccaaaa ttggacgtgt ggatgagtca cggcgacaaa
    22801 gtcaccaaat taccaccgca ctttaccatc acaggcgtta ccccaacctg cccgattgcc
    22861 gcgatgtcgg acgaaagccg ccgtttctat ggcgtgcagt tccaccccga agtgacccac
    22921 accaaacaag gcttggcgtt gctgaaaaac ttcgtggtcg gcatttgcgg ctgtgaaacg
    22981 aactggacgg cagaaaacat cattgaagat gcggtgaaac gcattcgtga gcaagtgggc
    23041 gatgacgagg tgattttagg tttgtcgggc ggggtggatt cctccgtcac cgccttgcta
    23101 ttacatcgtg ctatcggtaa aaacctgcac tgcgtatttg tggataacgg cttgctccgc
    23161 ttgaacgaag gcgatcaagt catggaaatg ttcggcaaca aattcggttt gaacattgtg
    23221 cgagtgaatg ccgaagaccg tttcttagaa gcgttaaaag gcttagacga accggaagct
    23281 aaacgcaaaa ccattggtaa agtgtttgtg gacgtgtttg atgacgaaag caaaaaactt
    23341 agctcggtca aatggcttgc acaaggcacg atctaccctg atgtgattga atccgccgcc
    23401 agcaaaaccg gcaaagccca cgtgattaaa tcacaccata acgttggcgg cttgccggat
    23461 tatatgaagc tcggcttagt cgaaccgttg cgtgaattgt ttaaagacga agtgcgcaaa
    23521 atcggcttgg cactcggctt accagctgaa atgctcaacc gccacccgtt ccccggcccg
    23581 ggcttaggcg tgcgtgtgct gggcgaaatc aaaaaagagt actgcgattt actgcgtaaa
    23641 gccgatgcga tcttcatcga agaactgcac aaagccggct ggtactacaa agtcagccaa
    23701 gctttcacgg tattcttgcc ggtgaaatcg gtgggcgtaa tgggcgatgg acgcaaatat
    23761 gactgggtcg tcagcctgcg tgcggtggaa accatcgact ttatgaccgc tcactgggcg
    23821 cacttgccgt atgatctatt aggcaaaatc tccaaccgca ttattaacga agtgaacggt
    23881 atttcccgtg tggtgtatga cgtgagcgga aaaccaccgg caaccattga gtgggaataa
    23941 ctcttacaaa ataggcttct tataacctaa gttcagtatc taaagctgaa aaatgttgtt
    24001 aactgcttaa tgtagcggtt tagaataaag gattgattcc aacggaatca atccttaaac
    24061 taagtgcctt ttagtaaaac taaatattca atttttagtt ttatgatttc agtaagccag
    24121 atgaaccttc ggaataatct ctaggttgat cttcttccgt tttttctgcc ggaataggta
    24181 atttggtttg ttggaaaaag gtaatatttt ttgatgcttc tggtaatagc ttttcagagc
    24241 tttgtgctaa atgggtataa agctttttat aatcagaagc tagacttgaa agtaattggg
    24301 ctgattgctc aaagtgttgt tcaagttttt gtttttgctc atccacttga gttttggttt
    24361 gcttcaactc tttttccagt tcatgctgtt ttctgacact actgttaaat actctaacta
    24421 gagtgcaacc tattacagca cctacaataa atgctgccat aatggctgcc caaacatctg
    24481 ttgtccattg ttccatcata aactccttat gttttagtga ttgattactg ctatttttaa
    24541 catttcagtt tttatttgaa aagctccaaa tgattaaaat gtgatatagg ttcaattttg
    24601 aaagattatc agcaaaaaat gttagatttt tgagtgaaat ctctgtataa tttcgccacc
    24661 ctgtttttgt gtggttttcc ccgccacaca agtttggtct gaatcagact cgaaggggtc
    24721 gggttcaccg taaaataata ggaaatacct caatgaggta ttgggtttta aactttaaat
    24781 ttggtattta attaatgaaa acttttgtag caaaaccaga aacagtacaa cgtgactggt
    24841 atgtagtaga tgcgacgggt aaaacattag gtcgtttagc gactgaattg gcacgccgtc
    24901 ttcgtggtaa acataaacct gagtacactc cacacgttga taccggtgat tacatcatcg
    24961 tgatcaatgc agacaaagta gcagtaacag gtaaaaaaca aactgacaaa atctactact
    25021 ggcacactgg ctatgtaggt ggcatcaaag atgcaacctt caaagaaatg attgctcgtc
    25081 gtcctgaagc tgtgattgaa atcgcagtga aaggtatgtt accaaaaggt ccacttggtc
    25141 gtgaaatgtt ccgtaaatta aaagtttacg caggttcaga acacaatcac caagcacaac
    25201 aaccacaagt tttagatatc taattcacgg agcataaaaa tgacagcagc aaatcaaaac
    25261 tacggcacag gtcgccgcaa aagctcttca gcccgtgtat ttatcaaacc gggttcaggt
    25321 aacattacta tcaaccaacg ttcacttgaa gtttacttcg gtcgtgaaac agctcgtatg
    25381 atcgtacgtc agccgttaga attggttgaa ttaactgata aattagacct ttacatcact
    25441 gttaaaggtg gtggtatttc tggtcaagcg ggtgcaatcc gtcacggtat cactcgtgca
    25501 ttaatggaat acgatgaaac gctacgccca gcacttcgtg cagcaggctt cgttactcgt
    25561 gacgcacgtc gcgttgaacg taaaaaagtg ggtttacaca aagcacgtcg tcgtccacaa
    25621 tactcaaaac gttaagtgcg acaagttgtc gtacttatgg caataactcc ttatatatca
    25681 aggagttatt gctggaagtg ggtggtattc ttatcacctg cttccgactt tccaagcact
    25741 cttcggagtg cttggaaaga caggcaagag aaaaggggct ttgcccaagc actcttgttc
    25801 taagttggga aagtaaatga accaactcga aaggctgtaa ggtatgatct tcactttgat
    25861 gtacttggtt tttttcttaa taccaagata gagtaagaaa gcaagatccg cagaccggag
    25921 ttacccatac cccagagcag agaaaattta caacacctac tataaataaa gtccaataga
    25981 tcgcctcagc actcagaaaa gacatcagaa ctaagacttg gtaaatctta gggaaggagt
    26041 gccatcttta cttatacttt tcacactcgc aatctacggt aatcgtagaa tgctcctcaa
    26101 tagtgaataa aaacactaag gataaactct tgtttattcg tttttatgag ctagggataa
    26161 ttatacctta aattctcgtt aaaatcacct ctaatactca cattagctag ggttagctac
    26221 cttcgcctat tggacaggtt ataggctatt tgcgggaaaa tttggatata gacaaagcga
    26281 ctttagtcgc ataagtgaat ttattttgta aaggttcgga cttatttatg cagtatagga
    26341 tactgactta gtaagtatgc gtaagctatt actgtcattg ttacggtcaa acaatccgaa
    26401 gatatgagta gtacggaggg aatgataagg taacctgtta tatggctaac agtagtctag
    26461 ggatagtgcg acaccggtaa cggtgtggtg cggagcttcc tgacaatgaa cccctgatga
    26521 aaatcagtca atgaaatcgt gagaggacat tgggagaaag tgaatagcac accttcaagg
    26581 ggctagactg ggtagaaaga taaacgtaag tgaacagttg ataaacctcg ttatcgagag
    26641 agagccaaag ctattgatag gctctgacca aaaggtaggc agtcggttat tcttctttaa
    26701 cgtgaggata cgccatcaaa gcactgtcgg gggagagact gtatcttcac tactcgtgtg
    26761 atagtaatgg aacttggtaa gcctgtattt ctgccttgcc cacaatactc aaaccgtttg
    26821 aaatagatgg cgaaggtaaa agaggaaaag gcaagtaaag cgtaagcgat actgttggga
    26881 atgcaggtaa gggaggttag aaaaagcgaa tgctatgctg taatggcata gatagggtgt
    26941 gaaacatagc ctaacccgaa agggtgcaga cttctaactg gtctttcatc gtaagatgaa
    27001 tagcgtttcc tttaagggta acaccgaaag agattgtaga taacagaaga gaaattgaat
    27061 gttatcaagg aatacaatgt tgaataggta caaaaacaaa ttaaagaaat gagcgttagg
    27121 ctcatcataa cctagcgctc gactctttaa cccaatcggt tacaagagcg gttgaaatta
    27181 tcggtaaaac ggtaagatcc tcttgtaacc aaagggaata aactaaggat agtttatctc
    27241 aatagggatt tgtttacttg aaggatctac ccacttgctg agactttcga cttatcttgt
    27301 aatatcagag gtaggtatga aagagcgtaa gcattatact gaaaagttag cttgcaatcc
    27361 agcgacctcg cacatctcca aatggcatta tgtcgattgg cataaagctg aaacgtatgt
    27421 gaaaggaatg caaattcgga ttgcgaaggc aacactggaa ggcaattggc gtaaggttaa
    27481 aaacttacaa cgaatgctaa cccactcaca ttatgctaaa ttagttgcag taagaagagt
    27541 gactgaaaat caaggtaagc gaacaagtgg tgtcgataaa gagctttggg agaccccaga
    27601 gacaaaatgg caagccgcac tatcattgac ggaaaaaggg tataaaccta gtccattaag
    27661 acgagtgtat atccccaaac cgaatggaaa gaaacgtccg ttgggtattc caacaatgcg
    27721 agatagagca atgcaagccc tttatttatt ggcaatacaa cctgtggcag aaacaactgc
    27781 ggataaaggt tcttatggat ttagattaaa ccgttcaacg gtagatgcta ttactcatat
    27841 acactaaatt tattcgcata aaggcaagaa aactaatcaa cctgttgagt gggtacttga
    27901 tgcggatatt gcaggttgtt ttgaccacat aagccacgac tggctattaa agcatattcc
    27961 aatgaataaa cggatattgc ggaaatggct aaaatcaggt gtagtggaat ttggacggtt
    28021 gaaacgaaca gaggaaggta caccacaggg tgggattatc tcgccaacgc ttgcaaatat
    28081 ggcattagat ggattggaaa aactgttaga aactcatttt ggaggaaaag gcagtcggac
    28141 aattcgagaa aataaaactt acttagtacg ttatgcagat gactttatca tatcaggtaa
    28201 aacgaaagag ttacttgaaa atcaagttat cccacttatc cagaactttc tgaatgaacg
    28261 aggtttatcc ttatcaacag aaaagacgaa agtggtacat attgaagaag gttttgattt
    28321 tctaggttgg aatgtgagac gtttcaaagg aaaaatactg aacagaccaa gtcaaaagaa
    28381 tgtgaaagcg ttctacaaca aggtaaaaga ggtaatttct aaatgaaaat ggctaaacag
    28441 gaagatctta taatggtgct aaacccaatg ttacgaggtt gggcaaatta tcatcgaagc
    28501 caagttgcaa gtaaggcatt cggacgaatg gacgcattag tttggaaagt actttggaaa
    28561 tggtgtgaac gccgtcatca caataaaggt attatgtgga taaaagagaa atacttttgt
    28621 accacagcga ctcgaaattg ggtatttggc acagtttata ccaatgaaaa aggagaaact
    28681 aagccgatag acttattcta ttgtggctat gttaaaatca aacgacacgt taaaattaag
    28741 tctgaatata atccgttttt gcctgaatgg gagttgtacg gcgaaaaact gagccaagaa
    28801 cgtctgtatg aagaacaatc acacagacga caatggcagg cactgtataa agaccagcgt
    28861 ggaaaatgtg cattatgtgg gttgccaata accaaagaaa caggctggca cgatcatcat
    28921 atcgtgtaca aaatgttagg aggaagcgat gcattaagca atcgttgttt ggtacatccg
    28981 acttgtcaca taaagattca tactttgaac ttggaggtcg tgaagccggc tatatagctg
    29041 atgaaaggct tgagctgtat gcagagaaat ttgcttgtac agttcttagg gggcggaggt
    29101 gcagtaatgt actttcgcta cccgactttt cttttcgttt tcaagaaggc agggtttcct
    29161 gccttttttg tctttatgac tgtggtagaa taaccgccct gattaactat ttgatagagg
    29221 catttatgtt agccattatt tcccctgcca aaacccttga ttttaaaacc aatattgacg
    29281 gttttgcatt ttctcaacca aatttgaccg cttgtagcca agaattaatt gatatttgta
    29341 aacagctttc acctgctgaa ttaggtagtt tgatgtcaat tagcgataaa ttagccgctt
    29401 taaatgtggc tcgctttgcc gagtggcagc ttgagcataa cgaacaaaat gccaaagccg
    29461 ccctctttgc ctttaaaggt gatgtttata ccggactaga ggcagaaacg ttaagcaaag
    29521 cacaagttga atatgctcaa caacatttgc gtatgctttc aggcttgtat ggtttattaa
    29581 agccgttaga tttaatgcag ccttatcgtt tagaaatggg cactaagtta gccaatccga
    29641 aaggcaaaga tctttatgct ttctggggca atattattac tgaaaatttg cagcaagcga
    29701 ttgatgaaca aggcgatgat attttagtta atcttgcctc tgatgaatat tatggtgcgg
    29761 ttaagccaca aaatctaaat gcgactatta tcaagccggt gtttttagat gagaaaaacg
    29821 gtaaatataa agtgatcagc ttctatgcca aaaaagcccg tggaatgatg gttcgcttta
    29881 tattagacac ccaaccgact agcatcgaac agctcaaaca gtttaactac gggggctatt
    29941 ggtttgatgc agacagttct agtgaaagcg agctagtctt taaacgtgag gagcaggcat
    30001 aatgtcggct atcaaaaagg gaataacttt ggttgcgtta tcattggcag gttgtgtcag
    30061 ccaaagccca caatttgcag tgcctgatgc tattcacttt gggcaggata cttttgtaaa
    30121 agtcacccac agccaaattg atgaaatgca acatttactt tatttgccag aaaagagtga
    30181 gaaaaatccg gaaaattggc aaaaaggcat tttatttttc ttagataaaa acagtaaaaa
    30241 tcaaacctta gagcaacgag ctgcattccg ccaagcaagt tttgcgaaaa agccggagct
    30301 tgaggcgaaa gtggaaattc agcaaaatga attacacagc agtgtgattt atccacctat
    30361 agaacgtttt aacaatgtga tgttagaagt aacccgtggg cggaatttag cttgtggtta
    30421 cgggcagatt caatttgcag ataagcggga agttggcaag acagttgcaa aaaaatcgcc
    30481 gaatttgacc gcttacagcc aagaaattgc tagactttct cttgaattaa accaactggg
    30541 ttggcaagtc caatgcagta aataatgtag taaatgaacg aaaaatacag caaattagtc
    30601 aaaaatgcag cgaatttagc gattattgtt gcgatcttac tgattgtgat taaagccttt
    30661 gcatggtgga aaaccggttc gatttcaatc ttggcagcaa tgacggattc ggtagtggat
    30721 ctgtttgctt cgctaaccaa tattttagtg ctgcgttttg cactacaacc ggcagatgag
    30781 aatcacgcgt ttgggcacgg caaagcggag tctttggcgg cacttgccca aagtgcgttt
    30841 atttccggct cggcggtttt cctactgcta caaggtttcc ataaactcac caatccggaa
    30901 ttaattgctc aatcgagtat tggggtaatt gtcagtattg tatcaattgt gattactgca
    30961 cttttagtct tttatcagcg ttatgttgtc acgcttacga aaagtccggc gattgaagcg
    31021 gattcgttac attaccaaac tgatttatta atgaatgcgg caattttagt ggcaatgttg
    31081 cttaatagtg ccggttttgt gtacgccgat gcagtttttg caataggtat tgccctctac
    31141 attgctttca atgcagtaaa aatgttttgg tgtgcggtgc aaaccttgct agaccaagct
    31201 ttgcccgatg aagaaattga gcggattaaa gagattgctt cgcaacatcc gaacatttta
    31261 gggattcacg atattctaac ccgccgtgca ggtgcagtgc gttttatcca attacatttg
    31321 gaattagacg atcacttaac gctgctagta gctcacgaaa taactgatag ccttgagcag
    31381 aaattgctgg cggcatttcc gatgtctcac gtgattattc atcaagagcc gactacggtg
    31441 gtcaaacaag aatttcaaga tatggcggag aatatttaat gtatcaggcg atagtgcatt
    31501 tcagctatca taattttgag caagatccgg tgacggcaat tagccaaatc ttaaatcaat
    31561 ggttatataa cgggcaagtc attggcagag aaatgccgat tacttttcat caaaacgagt
    31621 ttcaagctcg ggtttgtgtg cctacacaag aaagcctttt gccacaatat aatagtgatg
    31681 aagtaaatga agcgttgcaa caagcggtcg aaatcggcgt aatttttgca agttttgagc
    31741 ttgtcgggcg agattatcag ggcgaagaaa gcagtcataa ccgctcgcca gcgtttcaaa
    31801 tattatatac cacccattta gatacctgct cgccacttta tgatggagag cagtttgccc
    31861 caattccgct ttattcttta caggatcagt ctcttagcga agcgatattg gaatggcagc
    31921 aaaattggca agcgtgcgat ctgctacaaa tgaacggcaa tctgctggag tgccacgcac
    31981 ttgttcaaat tagtgatgaa acaagcgatc ttgcaatgat cggtcgagat ctatgtcagc
    32041 aaattgagca gaaaactcac attcccacct tttattacct ctaccgttta gggcgtgatg
    32101 aaagtgaata tcaacgcaaa tgcccttgtt gtggcggaga atggaaatta actgagccgt
    32161 tgcacgatat tttccatttt agatgtgagc cttgccgttt gatctctaat ctaagctggg
    32221 aattattata acttttagtt ataccaaagt aataaatcat cttgaatgaa tgccgcaagc
    32281 gtaataccct tgcggcattt ttataataag cggttttact ttggaggttc tgtgcttatt
    32341 ttcaacttaa ttgtctttgc ggcaatatta tttttattgg ctaaaattta taaatctacg
    32401 caaaaactcg gtcaaacagt gtttattggg ttatttttag ggcttgcaag cggtgctttt
    32461 ttgcaaactt tttacgaaaa agctactgtt gatgcaactc ttgattggat taacttaatt
    32521 ggtaacggtt atgttcgctt gctacaaatg atcgtaatgc cattggtgtt tgtctctatt
    32581 ttatcggcaa ttacccgctt aaaagaggca ggatctttag gcaaaattag ttttagtgtg
    32641 ctatcagtgt tattagtgac caccgcgatt gccgcagcga ttggtattgc tttagtgtat
    32701 ctgtttgatt tatctgccga gggtttagtc gccggctccc gtgagcttgc cgctcaagag
    32761 aaagtggtag ggcgtgtgga gcaggtgagc aacttatctg tgccttcaat gttgctttct
    32821 ttcattccga aaaatccgtt tttagaatta accggtgcaa acccaacgtc gatcatcaac
    32881 acggttattt tctcggctct gctaggcatt gctgcactga gcttaggcaa agaagataaa
    32941 gcgttgggcg aacgtatcgc acaaggtgta gagaccttaa ataaactggt tatgcgttta
    33001 gtacgttttg tgattcgcct aaccccttat ggcgtatttg cgttgatgat caaaatggcg
    33061 gcaacttctc aatggagcga tattgtaaat ttaggtagct ttattgtggc atcatacatt
    33121 gcgattggtt tgatgtttat tgtgcacggt attttactct ttgtggctaa aatcaacccg
    33181 ttggattact acaaaaaagt gttgccgaca ttaagttttg cttttacgtc tcgttccagt
    33241 gcggcaacca ttccgttgaa tattgagacg caaaccaata aattaggtaa taacagtgtg
    33301 attgccaact tttctgcaac ctttggggca accatcgggc aaaatggctg tgcgggaatt
    33361 tatccggcaa tgttggcggt gatggtcgct ccaacagtgg gaatggatcc gtttagctta
    33421 aactatattt taaccttgat tttggtggtg gcaatttcct catttggcat tgccggtgta
    33481 ggtggtggtg caacttttgc ggcgattgtg gtgctatcaa ccttgaatct gccgattgag
    33541 ttagtaggct tgctcatttc agttgagccg attattgata tggctcgcac cgccttaaac
    33601 gtgaatggtg caatggtggc gggcacatta accaataaat gggtgaaagc cgagtagtca
    33661 aaactaaaga tataaaaatg ggcgattaat tcgcccgttt ttataagtta aggtgattat
    33721 tcaatccacg caatcacttc ttcggtaggt ttgcgggatt ttttcttaat ttctttgttg
    33781 cgatagccaa aagttatcat acaagacaca ccatattcgt ttaggtcaaa taagccttcg
    33841 tccgataaaa tttggtttac ggtatcgtaa tgaaaacctt caatcgggca agagtcaata
    33901 ccaatcagag ccgcaccggt catcatattg cctaatgcaa tataggtttg cttggtactc
    33961 caatcgaata attcacgttc actaagcaat ttcatatcct cttcttggaa cgacttatag
    34021 cgtaccagcg aggcttcaat ctgctcatag gttaagcctc gtttggctaa catatcacgc
    34081 atatagacag aatcataacg gacattcttt ttggttaaaa tcaccactaa atggctcatt
    34141 tcttccattg ggtgtttaat tccccacgaa accggggcga ttttctgacg ggtttccggg
    34201 ttttgtagca ctaaaaattt ccacggttca gaaccgacag agcttggtga gagacgcccg
    34261 agttccaaaa tataatccat atcttctttg ttgatttttt tgtttggatc gtaactgcga
    34321 caggccgaac ggaagtgaaa agcgtctaaa acttgctgtt tgctaatatt aaacatcgtt
    34381 tttcctttta taagtgaaat aagtagatta atgataactt gatttagagc agaatgcgaa
    34441 tttcacgcct gttaatttgc aaaaaattag gaaaaaatga ccgcttgttt aaaattgctt
    34501 taccttaaaa atcaatcatt taacgaatcg gttgatttac tttttctggc taaagtatta
    34561 ttattcatga aattttttat ttcattgagt ttagaggata ggtaatgcaa cacctaaaag
    34621 atttaactaa taaagcacgt gaagctttag ataagattga tcaaaattta gaggctttag
    34681 aagagtttag agtcgaatat tttggtaaaa aagggcattt tacaacgtta atgcaagaat
    34741 tacgcaatat tgcagcggaa gaaagaccgg caatcggagc aaaaattaat gaagcaaagc
    34801 aagttgtgct tgatgtgtta aatgccaaaa aagaagaatg ggaacaagct gtattaaatg
    34861 caaaattagc taatgagagc attgatgttt cactgccggg gcgtaaaact gaattaggtg
    34921 gtttgcaccc tgtttctatc actattgagc gtgtggtgaa atttttctct gaattaggtt
    34981 ttaccgtagc aaacggacct gaaattgaaa ccgattacta taacttcgat gcgttaaaca
    35041 ttccggatca tcatccggct cgagcggatc acgatacgtt ttggtttgat gccaatcgtt
    35101 tattaagaac ccaaacctcg ggtgtgcaaa tccgtacaat ggaaaatgta aaaccgccta
    35161 tccgtattgt ggcaccgggg cgtgtatatc gtaatgacta cgaccaaacc cacacaccga
    35221 tgtttcacca aatcgaattg ttatatgtgg ataaagaagc aaactttacc gagttaaaag
    35281 gcttaattca cgattttctc aaagcattct ttgaagaaga tttacaagtg cgtttccgcc
    35341 cgtcattctt cccattcact gagccttctg cagaagtaga tgtaatgcgt caaaacggca
    35401 aatggttaga agtgttaggt tgcggtatgg tacacccgaa tgtgttacgc aatgtaggga
    35461 ttgaccctga agaatatagc ggttttgctg tgggaatggg cgtcgagcgt ttaacgatgt
    35521 tacgctacaa tgtcacggat ttacgttcat tctttgaaaa tgacttacgt ttcttaaaac
    35581 aatttaagta atacaagcgg ttaaaaattt agaaaatttt acaaatagga tagaaataat
    35641 gaaattcaat gaatcttggt tgcgtgaatg ggtaaaccca gcaattagca cagaacagtt
    35701 atgcgaccaa attacaatgt tagggttaga agttgacgat gtagagccgg tagctggtgc
    35761 gttttcgggt gtagttgtgg gtgaagtggt ggaatgcgcc cagcacccgg atgctgacaa
    35821 attgcgtgtc actaaagtga atgttggtgg cgaacgttta ttagatattg tttgtggtgc
    35881 accaaactgc cgtcaaggtt taaaagtggc ttgcgctgtt gaaggtgcag tgctaccggg
    35941 cgatttcaaa attaagaaaa ccaaattgcg tggtcagcct tcagagggga tgttatgttc
    36001 ttactcagaa cttgggatta aagaagatca tagcggtatt attgaattac ctgctgatgc
    36061 acctattggt caagatttcc gtgaatattt aaatttaaat gatgtggcga ttgaaatcag
    36121 ccttacgcca aaccgtgccg actgcttaag cattgccggc attgctcgtg aagtgggggt
    36181 gattaaccgt gtcgatgtga aagctccaac tattacagat gtaaaagcca cgatttcaga
    36241 taaagtttca gtggaattac aagcaccgga ggcttgccct cgctatttag cccgtgtggt
    36301 gaaaaatgtg aatgtcaaag cgacatcgcc actttggtta caagaaaaat tacgccgttg
    36361 tgggattcgc tcaatcgatc caatcgttga tattactaac ttgagccttt tagaattagg
    36421 gcagccaatg cacgcctttg atgcagcgaa aattgaaggt ggcattcaag tgcgtatggc
    36481 aaaagaaggc gaagaattgg tattgctaga tggcacaaac gctaaattac aatcgaatac
    36541 cttagtgatt gctgatagca aaggggcatt ggctatggca ggtattttcg gtggcgaagc
    36601 cagcggggtg agcgagaata cgaaagatgt ggtgttagag tctgcatttt ttgctccatt
    36661 agcgattacc ggtcgcgctc gtcaatatgg gttacatacc gacgcatcac accgttttga
    36721 gcgtggggtt gatccagaat taactcgtca agcaatggag cgtgcaacgg cattattact
    36781 ggaaatttgc ggcggtgaag caggtgaaat tgtggaagcc gtgagccaag aaaacctacc
    36841 aaaacgcaat actgtcacgc ttagacgcag taaattagat tcggtgattg gtcatcatat
    36901 tgacgatgca acggtaaccg atattttaac ccgcttaggc ttgaacgtaa catttgcgga
    36961 taatagttgg acggcaattg ctccaagttg gcgttttgat attgaaattg aagaagattt
    37021 aattgaagaa atcgcgcgaa tttatggcta caacagtatc ccaaataatt cgccacttgc
    37081 tcatttaacg atgaaaggta cgccggaaaa attactggaa gcaaaccgta ttcgtatggc
    37141 attggtagat agtgattacc aagaagtgat tacttatagc tttgttgatc cgaaaaaaca
    37201 atcattattg cacccacagc aagaagcctt gattttacca aacccgattt caagtgaaat
    37261 gtcggcaatg cgtgtttctc ttttaaccgg tttgttggac actatcgtgt ataaccaaag
    37321 ccgtcagcaa aaccgtgtgc gtatttttga agcaggtcta cgttttattc cggatagcaa
    37381 tgcggaatca ggcgtgcgtc aagaatttgt ttttggtgcg gcgattgtag gcgataaacg
    37441 tccggtacat tgggaaaaca aatcagaagc agccgatttc tttgatttaa aaggcgatat
    37501 tgagcgtatt ctttctttaa cctctatccg ccacgatctg caatttgtcg caaaacagtt
    37561 cccagcatta cacccggggc aatcggctgc gattatgctt gatggcaaag aaattggttt
    37621 tatcggaact gttcacccgt caattgtgca aaagtttggc attaaaggca aaccgattgt
    37681 atgtgaaatt ctagcatcag ctattgcaga gcgtccggtt acacaagcgg gcgaaatttc
    37741 taaatttcct gcaaataacc gtgatattgc ggtagtggtt gatgaatctg ttcctgcagg
    37801 tgaggtgtta gaggcttgtc gtaaagctgg tggtaataaa ttagtggcag taaatttatt
    37861 tgacgtttac cgtggttcga atttagaaag tggtaagaag agtttagcca ttagcttaac
    37921 ggttcaagat aatgaaaaaa cattagaaga aaatgaaatc aatgcggtaa ttcaagcggt
    37981 attagctgaa ttagcaacac gtttcaatgc ggtacttcgt gattaatcag taaaatatgg
    38041 ctgatttatt ttatcagcca taacaataaa ctaaggataa atgatggcgc ttaccaagat
    38101 tgaaattgca gaaaacctga ttgaaaaatt tgggttagaa aagcgtgtag cgaagcaatt
    38161 tgttgaattg ttctttgaag agatccgatc ctccctcgaa aatggtgaag aagtgaaatt
    38221 atctggtttt ggtaattttt cactgagaga aaaaaaagct cgtccaggaa gaaatcctaa
    38281 aacgggggaa aatgtggctg tttcagcccg tcgagtagta gtttttaaag ctgggcaaaa
    38341 attacgagaa cgtgttgagc aagctagctc ccaatcatag gggcagttat attagttaga
    38401 tttaatgtgg agtaataaat gaaattaacc aaacggtggc tttccttagg ttgtttgtta
    38461 gctattacag cgatgttagt ggcttgttca agttcagata caacctctaa gtctcaagta
    38521 aaaagtaaag tttatcgttc aatataccaa tcagaccttt ctgatcctat tatggcaatt
    38581 agtcgattaa gtgaacatca acacgaatgg aaaggcactc gctatcgttt aggtggcaat
    38641 agcaaggctg gcatcgactg ttctggtttt atgcaagtca cttttaaaga tctttttggg
    38701 atagatttgc cgagaaccac cacagagcag gctaaggctg gtgagcgtat atccaaagac
    38761 gaattgcgta caggtgattt agtttttttc aagacagggc gtggtccaaa tgggaaacac
    38821 gttggtgttt atgtaaaaaa tgggcaattt cttcacgcct caacaaaggg aggggtgatt
    38881 tattctgatt tggattcgcc atattggtct aaggctttct ggcaggctcg tcgtttataa
    38941 tttagggtaa catacatgct gaaaaaaatc ggacaagcgg tcatatttgg acttttttgt
    39001 gcaattttaa ttttgtttgt agctccaatt attcagagta aagggagttc gttttcatta
    39061 tcagcattca ctcaaaaaga gattgtaagc tacaatgcag cggttaaaat agcctccccc
    39121 gcagtcgtta acgtatatag ccgaaatttt agttctgaaa atgaaacatt tgaagttaag
    39181 aatttaggtt cgggtgtgat tatgagtagc gatggctata ttttaactaa caggcatgtg
    39241 attgaagatg cggatcaaat cgtgattgct ttgcaaaacg gtgctatttc gactaatgta
    39301 aaattagtcg gcgatgattc tttaactgat ttagctgttt taaaaattga gggtgagaat
    39361 ttacctacta ttccacaaaa tccggagcgc aaactacaaa ttggcgatgt ggtgttggca
    39421 attggtaatc ctttgaattt aggacagagc attacgcaag ggatagtcag tgctattggg
    39481 cgaaaaacct taacagaaag tggtagacaa aattttattc agacagatgt ttccattaat
    39541 caagggaact caggtggtgc tttaattaat actgctggtg agctaatagg tattaacact
    39601 ttgcgttttg ggaaaaatac gaatgaattg tcagagggcc taaattttgc gattcccatt
    39661 aatctggcga atcaaattat gagtaagatc attaaagatg gccgagttat tcgtggctat
    39721 tttggggtaa gtacagattt gcttgacacc gcaaaaatgc aaggttatga aaaaggggtg
    39781 atcattgtta atgtagataa aaatgggcca gccgcaaaag cggggattca agcaggtgac
    39841 ttagtgctta aagtcggaga tattgaggca ttctctcctt ctcaaatgat ggaagagctt
    39901 gctgaaatga aaccttatac tacagtaaaa gtattggttc aacgtgatga acaattactt
    39961 aactttgatg taactattac tgagttacag actcaatagg gtagaaaatg aaaaaaatag
    40021 tgattacagt tgatgggccg agtggtgcag gtaaaggaac gttatgtcat gcattggctg
    40081 aaaaattagg gtttgatttt ttagattctg gagccttata ccggattact gcattaagcg
    40141 caattaaaaa agaggttccc cttgatgatg aggaaaaact agcggaagtt gggcgtaatc
    40201 ttgatattca atttttgcca gaaaatggcg agattcaggt gattttggaa ggagaaaatg
    40261 taggcgactt aatccgaacg gcagaagcag gtcaaaatgc ctctaaagtc gctgctttcc
    40321 ctttggtacg tgaagcactt ttagaacgcc aaagagcctt tagtagcgaa aaaggtctga
    40381 ttgcagatgg acgagatatg gggacagttg tgtttcctga tgcacaaatt aagctgtttt
    40441 tagatgcaag tgccgaagaa cgcacaaaaa gacgtgtaaa acagttgcaa gaaaagggat
    40501 ttaatgctaa ctttgacgag attttagccg agataaaaga acgtgatttt cgcgatagaa
    40561 atcgatcagt cgcgccactt gttccggcta aagatgcgtt gctgttagat tcaacgcatt
    40621 tatcaattga agatgtgatt aaccaagcat taaatcatat cgctcaatac attaaatttt
    40681 agtttgttgc ttcacatagg atttgtgtag cttttattat caaccccgtt taacaggacg
    40741 ttagatggat gtttattttt aagaagattt attatgtcag aattatcgtt tgctcaacta
    40801 cttgaagaat catttgcagc tacaccacgt ttaggtgatg ttgttaaagg tactgttgtt
    40861 gctatccaaa aaggcttagt tattgttgat acaggtttca aatctgaatc tgcaatcgat
    40921 gcctcagaat ttactaacgc acaaggtgaa ttagaagttc aagtgggtga tgaagtagat
    40981 gttgttctta aagctgtaga agacggtttt ggtgcaacag tagtttctcg tggtgatgca
    41041 aaacgtaacg aagcttggat tgctttagag aaagcatttg aagaacaagc tacagttatc
    41101 ggtttcgtaa atggtaaagt aaaaggcggt ttcactgttg aattaaacgg tgttcgtgca
    41161 ttcttacctg gttcattagt tgatactcgt ccggttcgtg attctttaaa cctagaaggt
    41221 aaagagtacg aattcaaagt aatcaaatta gatcaaaaac gtaacaacgt agtagtatct
    41281 cgtcgtgctg ttatcgaaac agaaagcaac caagatcgtg atgcggtatt agcaaactta
    41341 gttgaaggtt ctgaagttaa aggtacagtt aaaaacttaa ctgactacgg tgcattcgta
    41401 gatttaggtg gcgttgacgg tttattacat atcacagata tggcttggaa acgtgttaaa
    41461 cacccaagtg aagtggttaa tgtaggcgat gaagttactg ttaaagtatt aaaatttgac
    41521 aaagacaaaa ctcgtgtatc attaggctta aaacaattag gtcaagatcc ttgggctgta
    41581 attgctgaaa accacccggt aaacagcaaa ttaactggta aagtaactaa cttaactgac
    41641 tacggttgct tcgttgagat tttagacggt gttgaaggtt tagttcacgt ttcagaaatg
    41701 gattggacaa acaaaaacat tcacccatct aaagtggtta acgtaggcga tgtagttgaa
    41761 gtaatggtac ttgaagttga tgaagaacgt cgtcgtatct cattaggttt aaaacaatgc
    41821 aaagcaaacc cttgggaaca atttgcggca actcacagca aaaatgataa agtatcaggt
    41881 aaaatcaaat caattactga cttcggtatt ttcatcggtt tagaaggtgg tattgacggt
    41941 ttagttcact tatctgacat ttcttggaat gtttcaggtg aagaagcagt tcgtaactac
    42001 aaaaaaggtg atgaagtaga agctgttgtt ctacaagttg atgcagtgaa agagcgtatc
    42061 tctttaggta tcaaacaatt agaatctgat cctttcacaa actttgtaga tggtactaaa
    42121 aaaggtgcaa tcttaacagg taaagttgta gaagttgatg ctaaaggcgt taaagttgaa
    42181 ttggaaggtg gcgttgaagc atttattcgt gcaaacgaag caactgctga gcgtgtagaa
    42241 gacatcactt ctgttatttc tgttggcgat tcaatcgaag cgaaatacac cggtgttgat
    42301 cgtaaatctc gcgtagttaa cttatctgtt cgtgcaaaaa acgaagctga agaatcagca
    42361 gcaattgcac aagtgaacaa agaggaagtt gttgtaccta atgcatttgc tgaagctttc
    42421 aaagcagcta aaggcgaata attagtatag actaatctaa aatgggtatg ttttgaacat
    42481 acccatttaa acttagaaat g
//
LOCUS       DANLXD010000006        42058 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.006, whole genome shotgun sequence.
ACCESSION   DANLXD010000006 DANLXD010000000
VERSION     DANLXD010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 42058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42058
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.006"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            234..530
                     /locus_tag="PXD18_000252"
     CDS             234..530
                     /locus_tag="PXD18_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HDL6300721.1"
                     /translation="MTAITIPQFEEVTSKQFQSEFGRIVDIVKGKTPVAITQYGRPTM
                     VLFPYDQAVEARRLLAKQRLLEMLAERDKNPPAALAEITLEELDKMIDEERNAL"
     gene            520..936
                     /locus_tag="PXD18_000253"
     CDS             520..936
                     /locus_tag="PXD18_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative toxin-antitoxin system toxin component,
                     PIN family"
                     /protein_id="HDL6300722.1"
                     /translation="MHSDYLVIDTNILISGLLFPKSNPNLAVKKALLGYTICVSQATF
                     DEFLEVSARPKFAKYFSIQEREEFIANLLDAVKFVEIKETITDCQDPKDNKFLEVAIS
                     AKAKYLVTGDKKDLLSMNPYRNVEIISVSEFLAETR"
     gene            936..2594
                     /locus_tag="PXD18_000254"
     CDS             936..2594
                     /locus_tag="PXD18_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HDL6300723.1"
                     /translation="MKRFLTLFLLLFSSFSLAETHQIGILAQRGEAYTRTHWQPWVDW
                     LNSQFPNERFELVPLGINEASRRAELDFLLTNQAQFFYLSNQNVRWLATLNSPFSANG
                     EQGAVGSSIWVRADSHYQQLSDLKNQTISAVDNDAFGGFLLGLYQFHQAGMRQNRDFS
                     VQFSGFPVENALALLAEKQVEAAIVPVCLLEELEKEGKFKRSDFRLILQNPQAQGCLA
                     STPLLPNWSLAAMENVPNELAVQLATRLLNSHNPDLPRWTLPFSSAQADHILRELYRH
                     PQQKSLWATVLDWVRLNKFGLLAVVLFILLNLVALRYQVYRKSKALQQAHCKMQQYQQ
                     ELTRADRLALLGEMTTGFAHELKQPLSAVRMYAEGLKSQNSDPYQQRILDKLIAQVDR
                     AVKTMQSIRDWAQNRPSGEPQAVILNQLITNVIEFVAVENRQNAQISLIADRTFRLNL
                     HATVLEQVLTNCLLNALQAGASEISVRLQAVENGLEIAIEDNGGGFSPAQLEFPFVPF
                     RTDKPHGLGLGLVLCQRLMQSLNGRIVLANGENGAKVVLLLPQI"
     gene            2680..3327
                     /locus_tag="PXD18_000255"
     CDS             2680..3327
                     /locus_tag="PXD18_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDL6300724.1"
                     /translation="MIIHILDDEESILDAMSFLLAPLGVEIQTWQSSLDFLAQADLHR
                     QGVLLLDIRMPLPDGQQVHQQLREAQSTLAVVIMTAHGDVPMAVAELKKGAVDFLQKP
                     ASFEQLKQAIAQAEKVSEKAVKIREISQNYAKLTEKERNLVPLIMQGFTNKQIADKLA
                     ISVRTVEVHRANVMEKMQAESLAGLVQMIGELQYKGSGNCSATFSFDFCRINLLL"
     gene            complement(3311..4249)
                     /gene="ttcA"
                     /locus_tag="PXD18_000256"
     CDS             complement(3311..4249)
                     /gene="ttcA"
                     /locus_tag="PXD18_000256"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005634611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HDL6300725.1"
                     /translation="MTDDIQKSDKKITYNFNKLQKRLRRNVGNAIADFGMIEEGDRVM
                     VCLSGGKDSYTLLDILLNLQQSAPVNFSVVAVNLDQKQPGFPEEVLPRYLESIGVEYK
                     IVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLATLF
                     LNMFYGGKMKSMPPKLISDDGKQIVIRPLAYCKEKDIIKYAEAKQFPIIPCNLCGSQP
                     NLQRQVVKEMLNTWDRQYPGRLETMFSALQDIVPSHLCDPKLFDFKGIKHGQTIEGIE
                     GDTAFDDVKIEAKTFLYEDDDNNFAEAGMIQFKEVN"
     gene            complement(4312..5025)
                     /gene="ubiG"
                     /locus_tag="PXD18_000257"
     CDS             complement(4312..5025)
                     /gene="ubiG"
                     /locus_tag="PXD18_000257"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HDL6300726.1"
                     /translation="MQNVDQQEITKFENMAKTWWDPNGSFKPIHLLNPLRLAYILEKS
                     NGLFGKKVLDVGCGGGILSEAMAKQGAIVTGIDMTSQPLEVAKQHAKESGLEIDYQQT
                     TIENFLAKMTACNQEKFDVITCMEMLEHVPDPLSIIQSCKALLKPDGVLFFSTINRTF
                     KAYMLVIIGAEYVLKMLPKGTHEFEKFIKPAELLAWCDQADLRCQEMRGYHFNPLTEK
                     FWLNNDVSCNYIATLKPNN"
     gene            5090..5470
                     /locus_tag="PXD18_000258"
     CDS             5090..5470
                     /locus_tag="PXD18_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine dimer DNA glycosylase/endonuclease V"
                     /protein_id="HDL6300727.1"
                     /translation="MTRINLVPPTELCDQHLLAEHRELTRIPNAVAKGKFSLKGQPED
                     YKLGEGHVRFFFNKLTFLKKRYDALHEECLARGFKVQYFWAEHLPQDPSLWLDYQPTE
                     TALTVNRERIALRMPANPRFSERK"
     gene            5567..8263
                     /gene="gyrA"
                     /locus_tag="PXD18_000259"
     CDS             5567..8263
                     /gene="gyrA"
                     /locus_tag="PXD18_000259"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HDL6300728.1"
                     /translation="MSELAKDIIPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPV
                     HRRVLFSMDQNSNTYNKPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYML
                     VDGQGNFGSIDGDAPAAMRYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLP
                     TKIPALLVNGSSGIAVGMATNIPPHNLGEVLDGCLAYIENEQISVEELMRYIPGPDFP
                     TGAIINGRKGIEEAYRTGRGKVYVRAKASVETTDKGREQIVVTELPYQVNKAKLIEKI
                     AELVKEKKIEGISKIDDYSDKKGISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMV
                     ALDNGQPKVLNLRQIIEAFVKHRREVVTRRTIFELRKARERAHILEGLAIALANIDPV
                     IELIRASKTAEEAREGLLARPWALGNVAPMLEAAGVGASRPEDLPEHLGVRDGEYYLS
                     EAQARAILELRLHRLTGLEHEKIVEEYKELLTEIGELIHILTSPERLMEVIREELERV
                     KTDFNDERRTEITAASGDINIEDLIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGK
                     SATKMKEDDFIEKLLVANTHDTILCFSSRGRLYQLKVYQLPQASRGARGTPIVNILPL
                     VKEENERITAILPIPNGEFSADKFIFMATASGVVKKVSLDAFSNVRASGLIALKLREG
                     DELIGVDITDGNSEIMLFSAQGRVVRFAETAVRAMGRTATGVRGIKLSTTEISSEEIE
                     EAEIIETDNEEAEDSSSVSLDKDRVVSLVIPRTEGDILTVTQNGYGKRTVISEYPVKS
                     RATKGVVSIKVNERNGKVVAAVQVEETDQIMLITDAGTLVRTRVAEVSLVGRNTQGVR
                     IIRTAEDEQVVSLERVCEPEDDENESLDALENAETAETSTEE"
     gene            8358..10322
                     /locus_tag="PXD18_000260"
     CDS             8358..10322
                     /locus_tag="PXD18_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6300729.1"
                     /translation="MALINLSNAYLGFGDHPLLDHTELHIEPGERVCLVGRNGAGKST
                     LMKILAGEVQLDDGKLVFEKDIVVTRLEQDPPRHIEETVFDYVAEGIAHLADLLKQYH
                     HISLQMQTDYSDELLAKLSAVQSQLEHANGWQFENRIQDTLKLLELAPDKRLCELSGG
                     WVRRAALARALVADPDVLLLDEPTNHLDIEAIAWLENLLLDFKGSIIFISHDRAFIRK
                     MATRIVDLDRGKLVSYPSNYDKYLEEKAEDLRVEALQNELFDKKLAQEEVWIRQGIKA
                     RRTRNEGRVRALKALREERRNRREVQGTAKIQIDNTARSGKIVFEVENAGYEIGGRTL
                     LKNFSTTILRGDKIALIGANGIGKTTLIKLLLGEIQPTSGSVRCGTKLEVAYFDQYRV
                     DLDPEKTVMDNVADGKQDVEVNGVKRHVLGYLQDFLFPPKRAMTPVKALSGGERNCLL
                     LAKLLLKPNNLLILDEPTNDLDVETLELLEEMLTDYQGTLIIVSHDRQFVDNTVTECY
                     FFEGEGVVNKYVGGYFDAKQQQENYFAATADKRLNSSKNLQKIEEKAPLAEQEKQKAD
                     QEKTKAEPTKKTKLSYKEQRELDELPAKMEQLEADIEALQAEVNSAEFFAKDPSYTNA
                     QLQKLADTEAALEQAFERWEALENIKNGNI"
     gene            10404..11162
                     /gene="tcdA"
                     /locus_tag="PXD18_000261"
     CDS             10404..11162
                     /gene="tcdA"
                     /locus_tag="PXD18_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HDL6300730.1"
                     /translation="MTERLDNYEQRFGGIGRLYTPEGLEKLRRSHICVIGIGGVGSWA
                     VEALARSGIGKITMIDMDDICVTNINRQIHAMSGTVAQLKTEAMKERIERINPECVVE
                     IIDDFLTQDNLADYLNRGYDYVIDAIDSLRVKAAMIAFCKRNKIKIITTGGAGGQTDP
                     TKIQITDLSKTVQDPLAARVRSLLRKEYGFSNKNKFGVECVSSTQQLIFPQMGEACEV
                     SATMNCANGFGAVTMVTATFGFFAVSRVIDKLLK"
     gene            11209..12576
                     /locus_tag="PXD18_000262"
     CDS             11209..12576
                     /locus_tag="PXD18_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LOG family protein"
                     /protein_id="HDL6300731.1"
                     /translation="MAIHRVNPKGSMEQLSHLEMELLAKNTQGNLHQLYRNCSLAVLN
                     SGVHTDDSRALLSQYPDFEIRLLTREKGVSLELHNPPETAFVDGKMILNIQYHLFAVL
                     RDIVFVNALKNAIRPLEETSLEALTTNTVFSILRNAKAIEMNTDPNLVVCWGGHSINE
                     TEYQYCRAVGQEFGLRELNIVTGCGAGVMEAPMKGAAIGHANQRYKNGRFIGITEPSI
                     IASEPPNPIVNELVIMPDIEKRLEAFVRLGHAIVVFPGGPGTLEELLYIIGIKLNPAN
                     HAQQLPLILTAPKESADYFYAIDQFIGETLGEEARSLYEIIIDDSVLVARKVKQAMIE
                     VKSSRYESGDAYNFNWSLKIEEDFITPFIPTHENMANLNLSLAQPKEQLAANLRRAFS
                     GIVAGNIKPETSDLIEKYGVFKLHGDRKLMEHIDKLLERFVVQHRMKIPTGEAYQPCY
                     EIVKG"
     gene            12596..14143
                     /locus_tag="PXD18_000263"
     CDS             12596..14143
                     /locus_tag="PXD18_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent endonuclease"
                     /protein_id="HDL6300732.1"
                     /translation="MYLKHIEISGFRGINHLSLQLRPNMVLIGENAWGKSSLIDALSL
                     IFNLEQALYQFQFKDFHIQYTDTPNQVRDIQLVFTFCEEHQHDLAVQFPAYLAQAAFY
                     IDNHRCVSLAVTGKLHGEQISTDYQFVDQSLKPIQIEQAENAIRQFIYHHPVYRLRDA
                     RLNNRVHNELLLKGSSQLEDDFQRELNALSSLLKYYFLTSQSRYLIKTSMQDTALWWE
                     KVKSLCLRLKQQPELVESAQQHISTLFLFNPRSTVIEKPIILFEDLNAQLHPRMIAIF
                     WELLGFLPSQRITTTNSIELLSQVPLREICRLVRHHDHTQAYWLERHSLGKEDLRKLT
                     FHIHHNRGLALFAKAWILVEGETEVWILQELARLLDIHLEMEGIKIVEFAQCGLRPLI
                     KYARAMGIEWYVLTDGDDSGKRYADTVKSMEEDFAHRLTMLPQKDIEHFFYKAGLRNV
                     FIQLANWRSQEKYPVSYIIKRAIQRSSKPDLAIALANEMGQRGEHSIPTLFKQLFADV
                     LALINKV"
     gene            14366..15400
                     /gene="metN"
                     /locus_tag="PXD18_000264"
     CDS             14366..15400
                     /gene="metN"
                     /locus_tag="PXD18_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein
                     MetN"
                     /protein_id="HDL6300733.1"
                     /translation="MIQLKNISKQFEVKGKKITALDNVNLEVPRGTIYGVIGASGAGK
                     STLIRCVNLLERPTIGQVIVDGQDLTAMSDKELIHARRNIAMIFQHFNLLSSQTVFEN
                     VALSLRLSNTPKEQVEKKVNELLDLVGLTDRKDVYPANLSGGQKQRVAIARALASDPH
                     VLLCDEATSALDPATTQSILQLLKDINKRLGLTILLITHEMEVVKRICDRVAVIDKGQ
                     LIESGSVSEIFSNPKTELAQKFIQSTFHFELPQEYTEQLSSSPTEHSKPIIKFEFTGR
                     SVDAPLLSMASKKFGIDFSILMSQIDYAGGVKFGFVIAEVSGNPDSIAEAKFYLIDNN
                     VKVEVLGYVG"
     gene            15390..16067
                     /locus_tag="PXD18_000265"
     CDS             15390..16067
                     /locus_tag="PXD18_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6300734.1"
                     /translation="MWADFMQEMTPQMWSLVWESTFETVYMGFVATALAVVIGLPIGF
                     LAFLTGKGEILENPRLHQVLDVVINIGRSIPFIILLIILLPFTRLVVGTTLGTTAAIV
                     PLSVSAIPFFARLTSNALLEIPSGLTEAAKSMGATNWQVVTKFYLPESLPILINGITL
                     TLVALIGYSAMAGAVGGGGLGNLAISYGEHRNMVYVKWIATIIIVAIVMISQKLGDHL
                     AKRYDHR"
     gene            16090..16923
                     /locus_tag="PXD18_000266"
     CDS             16090..16923
                     /locus_tag="PXD18_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family lipoprotein"
                     /protein_id="HDL6300735.1"
                     /translation="MSFKKILGVALVSALALTACKEEKKAESTAAPAAQAPAKIKVGV
                     MSGPEHTVAERAAQIAKEKYGLEVEFVLFNDYALPNTAVSKGDLDANAFQHKPYLDKD
                     SQSKGLNNLVIVGNTFVYPLAGYSKKVKNVSELAEGAVIAVPNDPSNLARALILLEKQ
                     GLIKLKDNTNLFSTSVDIIENPKNLKIKEVDTSIAAKALDDVDLAVVNNTYAGQVGLN
                     TQDHGVFVESKDSPYVNIIVARQDNKDAANVQNFIKSYQTEEVYQEAQKHFKDGVVKG
                     W"
     gene            17006..17836
                     /locus_tag="PXD18_000267"
     CDS             17006..17836
                     /locus_tag="PXD18_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family lipoprotein"
                     /protein_id="HDL6300736.1"
                     /translation="MNFKKLLGVALVSALALTACKDEKAQAPATTAKTENKAPLKVGV
                     MTGPEAQMTEVAVKIAKEKYGLDVELVQFTEYTQPNAALHSKDLDANAFQTVPYLEQE
                     VKDRGYKLAIIGNTLVWPIAAYSKKIKNISELKDGATVAIPNNASNTARALLLLQAHG
                     LLKLKDPKNVFATENDIIENPKNIKIVQADTSLLTRMLDDVELAVINNTYAGQAGLSP
                     DKDGIIVESKDSPYVNLVVSREDNKDDPRLQTFVKSFQTEEVFQEALKLFNGGVVKGW
                     "
     gene            17888..18679
                     /gene="metQ"
                     /locus_tag="PXD18_000268"
     CDS             17888..18679
                     /gene="metQ"
                     /locus_tag="PXD18_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter substrate-binding
                     lipoprotein MetQ"
                     /protein_id="HDL6300737.1"
                     /translation="MKIMKLAGAVAIFSLFLTACNDKAEKLKVGVISGPEHKVMEVAA
                     KIAKEKYNRDVELVVFTDYATPNAALDKGDLDLNAFQHKPYLDNQIQEKGYKLVPVGN
                     TFVYPIAAYSKKIKSLAELKDGDTIAVPNDPTNLARALILLEKQDLIKLRADAGLKAT
                     SVDIIENPRKLVIQEIEAPLLPRTLDDVAFSIINTTYAGQNGLTPTKDGIFVEDKDSP
                     YVNLIVARENNQHSEAVKDLVKAYQTEEVYNKANEEFKGAMIKGW"
     gene            complement(18724..19875)
                     /gene="metK"
                     /locus_tag="PXD18_000269"
     CDS             complement(18724..19875)
                     /gene="metK"
                     /locus_tag="PXD18_000269"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018356717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HDL6300738.1"
                     /translation="MAINLFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACET
                     YVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPD
                     INQGVDRADPLEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMEQQSKVRKSGKLDW
                     LRPDAKSQLTFAYENNKIIGIDAVVLSTQHAEHISQKELIEGVMEEIIKPVLPSEWLS
                     QNTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAA
                     YAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNEILVKLIYQNF
                     DLRPYGLIKMLDLIKPIYRETAAYGHFGRKHFPWEKTDKAEALRAGAGL"
     gene            complement(20058..20900)
                     /locus_tag="PXD18_000270"
     CDS             complement(20058..20900)
                     /locus_tag="PXD18_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin family protein"
                     /protein_id="HDL6300739.1"
                     /translation="MKVGLVLEGGGLRGIFTAGVLDVFLDEHIHIDGAIGVSAGALFG
                     VNLPSKQKGRALRYNKKYAKDKRYMGLHSLLTTGNIVNRDFAYYELPSKLDPFDQQAF
                     EDSGMDFWVTVTNVETGEPEYIKIDNVFEQMEAFRATSSMPIVSKIVEIEGKKYLDGG
                     VSDSIPVQKFIEMGYDKIIVVLTRPLEYRKKPSSMWLFKRFYKKYPKLVQRWENRYAE
                     YNQAVEQIIQLNEKQQIFVIRPSRTVKISRLETDVNKIQAMYDLGVEDAKNALAGLRA
                     YLAK"
     gene            20960..21277
                     /locus_tag="PXD18_000271"
     CDS             20960..21277
                     /locus_tag="PXD18_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HDL6300740.1"
                     /translation="MADAEFMDFLLDQLSPISGLRSKKMFGEYCLFFDNKIVAIISKD
                     YRIFVKANPQTLPLFLAENAEQFHYFAKGKVQKMHYWSIPELAIEEADELVKWIRLGL
                     QAV"
     gene            21368..22081
                     /locus_tag="PXD18_000272"
     CDS             21368..22081
                     /locus_tag="PXD18_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease"
                     /protein_id="HDL6300741.1"
                     /translation="MNQKKLVSLIVVIVLAIISQIFSFFDKKEPSKAQEKSTQSSQSH
                     QVSTSSLGNYDVQMKNDRLKQHIVDTDYYTLALSWSPAFCQKQKRNNHGKIPSHLEYQ
                     CGGSADFGWVIHGLWPQSGKARSVDEHPRYCQGDLPMVAEQTIKQYLPESPGATLLQG
                     EWEKHGACAFNQADDYFAKQKELFNQLKLPDTEMSKLALFNWMRANNPHLQNVYLGGS
                     KDELYICYDKAFQPMDCPR"
     gene            22081..22575
                     /locus_tag="PXD18_000273"
     CDS             22081..22575
                     /locus_tag="PXD18_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HDL6300742.1"
                     /translation="MADLRQLKMQVQRQLKRDLERANHYFNTTFTPPSISYAVRGVKA
                     GVAYLERNEVRFNPVLLQENEQAFIRQVVPHELAHILVYQHFGRVQSHGKEWKMMMET
                     VLGVPAEIYHCFDTQSVQQQFSYQCACQTHQLSIRRHNAVMRDKKSYICRLCKTQLHF
                     VEKS"
     gene            22680..23960
                     /locus_tag="PXD18_000274"
     CDS             22680..23960
                     /locus_tag="PXD18_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDL6300743.1"
                     /translation="METIVIVGGGAGGLELATYLGNKLGRKQKAKVVLIDRNATHLWK
                     PLLHEVATGTIDEGTDALSYRAHAKNHSFEFQQGTLVAVDREKKTVSLAPIYNDQNQL
                     LVKERHISYDKLVIAIGSKSNDFGTKGVAENCIFLDGSEQAKDFQKRMMELFLRFSHS
                     ENKDVKIAIVGGGATGIELSAELYHVVKNLNSYGFGKLNRASLKVTLIEAGPRLIPAL
                     PEKVSVSAFHELKKAGVSVRLGTMITEARPDGLMTRLGEKIEADIMVWAAGVKAPEIT
                     REFGFETNRLNQIEIKDTLQTTVDESVFVIGDCASLIQDGKPIPPRAQAAHQMATRCG
                     KNIVALIEGKEMKPFRFNDKGSLLSFSKFGTVGNLMGNLVSGDMFIEGKIARLAYLSL
                     YRMHQVALHGCVKTGLIVLVGQINRFLRPTMKLH"
     gene            complement(24047..25084)
                     /locus_tag="PXD18_000275"
     CDS             complement(24047..25084)
                     /locus_tag="PXD18_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6300744.1"
                     /translation="MNVLKLISLKSILIASGIFLSAQAAQAEGRLTVYCSVQNNVCEE
                     MTKQFSHKYNVETKFIHGGTGTIFGKVKAEASNPQADIWYGGTIEPHFQAGELGLLEA
                     YRSPKQAEILPQFKSLVESEQGKFTSIVYMLVLGLGVNTEKLAKLGIEAPKKWEDLSD
                     PRLKGEVQLPDPRSSGTTYTFMTTLSTLWGEEKTFDYLKKLNNNVSQYVKSTLVTSNL
                     ARGESAVTVGFVHSYATEKEKGAPIEAIIPEGKVGYALGGVSIIKNARNLDNAKLFMD
                     WVLSKEAQEIPWKKHGVYQTPTNINAEVAPQSTKAEALDFVEIDYQKAGSSEEGKRLI
                     DKWLAEIKLAN"
     gene            25306..26004
                     /locus_tag="PXD18_000276"
     CDS             25306..26004
                     /locus_tag="PXD18_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HDL6300745.1"
                     /translation="MENSWKYAFKLITPIFMGYFAAGVAYGMLATNAGMPAWFTIVMS
                     FTVVSGTAQYAAIPFFVSGVGAVSVFLSTLLMSLRFSFYTLNMMEHKPISKAKSLVAI
                     AGLTDEGFAVLSSLPKEQKQALFFKIAVLCVAYWTFSTIVGVLLGDSVANYIPHLDFA
                     LPCLFAILAYEQYKNQKQWKPIVIALIGFLLARQITETSVLLVAILVAIVIVALLPQS
                     SSIKLEKGVENEHK"
     gene            26015..26317
                     /locus_tag="PXD18_000277"
     CDS             26015..26317
                     /locus_tag="PXD18_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HDL6300746.1"
                     /translation="MFAALVLGSQICRFLPEFLPKKVLSSPILQKLNKMLPLVIMLLL
                     LLTSLNFPKNGEGFNLILAQILALIGVLGSYVWLKNTFLSVALGIFGVNVFLSLLG"
     gene            complement(26438..27739)
                     /locus_tag="PXD18_000278"
     CDS             complement(26438..27739)
                     /locus_tag="PXD18_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDL6300747.1"
                     /translation="MSLFKFEERGSNARQEIIAGLTTFLAMVYSVIVVPGMLSQAGFP
                     AESVFIATCLVSGLGSILIGLWANAPMAIGCAISLTAFTAFSLVLGQQVSIPVALGAI
                     FLMGVVFTLISATGIRTWILRNLPSSIAHGAGIGIGLFLLIIAATNVKLVVNSGMDIP
                     VKLGDFTSFPVLVSLIGLAAIIGLEKLKVKGSILWVIIAITIVGLIFDPNVKYTGFFK
                     MPSFGENSQFLNLDIMGALNTAILPVVFALVMTAIFDATGTIRAVAGQAGLLDKDGQI
                     INGDKALTSDSFGSILSGLFGTAPAAVYIESAAGTAVGGKTGLTAVVVGIGFLFMLFF
                     QPLAFLVPSYATAPALMYVGLLMLSNVSKLDFSDFVGAMSGLVCAVFIVLTANIVTGI
                     MLGFATLVIGRLISGEANKLNLGTVIIAIILVAFYAFDLAI"
     gene            complement(27872..28846)
                     /gene="secF"
                     /locus_tag="PXD18_000279"
     CDS             complement(27872..28846)
                     /gene="secF"
                     /locus_tag="PXD18_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HDL6300748.1"
                     /translation="MAIENVQQDVAEIKLPYKLIPFMKYRYVGFIFSLIVTALCIFTI
                     ATKGFNWGLDFTGGTVIETQFSQPADLAKLRTELENSGYGNALVQTTGSQKDLMIRLA
                     ASAGDMSVGNKVMEMIHQKLDPNATIKSIEFVGPNVGEELTQGAIYATLATLAMLLIY
                     VGTRFEWRLAVGGIVALFHDVLVTIGIFSFLQIEIDLTFVAAILSVVGYSLNDSIVVF
                     DRVRENFSKVRRSSSIEIIDISLSQTLSRTLMTSVTTLFVVLALFYLGGPTLHSFSLA
                     LLIGIGFGTYSSIYIAIGVALQLGLKREHMVQPKVEKEGADQDAFIDY"
     gene            complement(28856..30697)
                     /gene="secD"
                     /locus_tag="PXD18_000280"
     CDS             complement(28856..30697)
                     /gene="secD"
                     /locus_tag="PXD18_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HDL6300749.1"
                     /translation="MLNRFPLWKNLMVIFVIAIGALYALPNLYGDDPSVQISGTRGQQ
                     ATPETLSQVQSTLSAMNIQPKSAVLENGSILVRLESSEQQLPAKEKISEALGNNYSVA
                     LNLAPATPQWLSDIGGSPMKRGLDLLGGVRFLMEVDMNTALAKQQDTLQDSLRSDFRK
                     EKLQYQAVKKGENFATEVEFADNDTAEKAVRLVRLSHPTLDILVNDNKVTLTPSAQAL
                     SESRTMAIEQNLSILRKRVEELGVSEPTIQRQGADRIVVELPGVQDTARAKELLGATA
                     TLEFRLVNTEANVASAAKGIVPADSGLQNTRDGEPVVLRRKPSLGGEHIIDATSGTDE
                     RGLPQVSIRLDTEGGEMMGEITKMAIQKPMATLYTEFKDSGRKDANGKVILEKHQEVI
                     NVATIQTRLGNQFQITGINSPAEAQNLAVLLRSGALIAPIVIVEERTIGASLGADNVK
                     QGMEASILGLGLTILFCLAFYKVFGIFASLALIVNMILTIGLMSLIGATLTMPGIAGI
                     VLAVGMSVDANVLIYERIKEEIRNGRPIQQAIHEGYNGAFSSIFDSNLTTILTSLVLY
                     GVGTGPVKGFAVTLALGVIISMFTAITGTRMLVNWVYGGKRVKKLWI"
     gene            complement(30737..31030)
                     /gene="yajC"
                     /locus_tag="PXD18_000281"
     CDS             complement(30737..31030)
                     /gene="yajC"
                     /locus_tag="PXD18_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDL6300750.1"
                     /translation="MQQGGGMEMIFILIIFGAIFYFMIYRPQAKRQKQQRDLLASLTK
                     GDEVLTSGGLIGKITKVTADNDNIVIALNDTTEVTIKRDFVVAVLPKGSLKSL"
     gene            31231..31788
                     /locus_tag="PXD18_000282"
     CDS             31231..31788
                     /locus_tag="PXD18_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtfJ family protein"
                     /protein_id="HDL6300751.1"
                     /translation="MKKLFAQAVIFGAFFASSAFAHNVQLNQALPAVSVAKDGELAVA
                     GGKVSYKNWHSSSLAGKVRVIHHFAGRSSVKEKNEDLMTAIKNAGFDRSKYQTVTIVN
                     ADDAIVGTGVFVKNSVENGKLDNPHSQVVLDQQGSVKKAWGLKEKESFIAVLDKSGKV
                     QFTSEGKLSAKQIQEVIGLVKTLTQ"
     gene            complement(31829..32797)
                     /locus_tag="PXD18_000283"
     CDS             complement(31829..32797)
                     /locus_tag="PXD18_000283"
                     /EC_number="5.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-epimerase"
                     /protein_id="HDL6300752.1"
                     /translation="MKLFTLENAFLRITLSDVGASWLSCIVKMPNEEREVLVTTSAKN
                     WQKQTAFFGATIGRYANRIANAEYRLNGKTYQLAKNNGEHNLHGGELGADKIVWQLES
                     QSEQAVKFSYFFADGEEGFGGEVKAFVEYRLTENELQISFDAVANQDTPLCLTNHAYF
                     NLQGSETILDHELIINADGYLPVDASGIPNAPLKKVESTSFDFRNAKKIGQDLLADDD
                     QKAVKGYDHSFHLAKNSENPTACLAVEDLKMELRTSMPALQLYTGNWLKGQPNLTKGE
                     YEDYAGVALEPEFFPNSLNQPELLQFGGITKAGEEYHHTISYRFII"
     gene            complement(32923..34086)
                     /gene="galK"
                     /locus_tag="PXD18_000284"
     CDS             complement(32923..34086)
                     /gene="galK"
                     /locus_tag="PXD18_000284"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HDL6300753.1"
                     /translation="MKPQEIALQQFEQHFGYKAERTVFAPGRVNIIGEHTDYNDGFVM
                     PCAINYGTAVSFAKRSDNKWRVFAIDLNQQDEFDLSQAIEPSEQKWANYVRGVVKFIQ
                     AKHPEFKQGADLAITSDVPMSSGLSSSAALEVSIGKTAQLLGDLPLSLPQIALIGQEA
                     ENKFVGCNCGNMDQLTSALGQQDHLVMIDCRSLEITPTPVPQGYSIAIINSNVKHDLV
                     TGEYNSRREQCEFAAHFFGKAKLRDVTAEQFIERASELSEENELAYKRAKHIISENQR
                     VLEAVEALKANDMVKLGELMAQSHDSMRDDFEITCPEVDCLAEIAQQAIGKNGGARMT
                     GGGFGGCVVCLVPNDKVEDLRQAVANNYEKQTGIKETFHVCTASDGVRECPAR"
     gene            complement(34096..35142)
                     /gene="galT"
                     /locus_tag="PXD18_000285"
     CDS             complement(34096..35142)
                     /gene="galT"
                     /locus_tag="PXD18_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HDL6300754.1"
                     /translation="MSEFVLNDHPHRRFNPLKNQWILVSPHRAKRPWQGQQEEIVQDE
                     KPSYDPSCYLCPGNKRITGEQNPNYTKPFVFKNDFSALLPDTPAPIPNDDPLFQISHT
                     QGESRVICFSPDHSKTLPQLSIEEITDVVTVWQEQANELKEHYQWVQIFENKGSMMGC
                     SNPHPHGQIWASNFLPNEIAIEDECQAKYFAQYGSPLLLDYAQRELDKQERIVAETED
                     WIAVVPYWAAWPFETLLLPKAKQFKSITDLNEAEKADLALALKKLTTRYDNLFNISFP
                     YSMGFHFAPFNGKENAHWQLHAHFYPPLLRSATVRKFMVGYEMMAESQRDLTPEQAAE
                     RLNAVSDTKHYKDK"
     gene            35355..36206
                     /locus_tag="PXD18_000286"
     CDS             35355..36206
                     /locus_tag="PXD18_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF817 domain-containing protein"
                     /protein_id="HDL6300755.1"
                     /translation="MERLNKFDAWLMNHKPNARLSGASRLLTEFWFFGLKEARACLFA
                     GLFFIAMFSVPKTGLWGLPRYDILLIFAIVVQIAMVKLGLETWDELKAISLFHLVGFV
                     LEVFKTSSNIQSWAYPDFAYTKLFNVPLFTGFMYAAVGSYIIQAWRLFDLKIKSHLPY
                     WLATLTALMIYLNFFTHHYIGDYRWYIAAFALGLYARTFVFFTPYDITRKMPLLLSFF
                     LIGFFIWLAENIGTFAGIWRYPNQFGAWSMVHMSKWSAWALLVMMTFTIIVHLKHIKQ
                     TVRVSSD"
     gene            complement(36292..37377)
                     /locus_tag="PXD18_000287"
     CDS             complement(36292..37377)
                     /locus_tag="PXD18_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDL6300756.1"
                     /translation="MEYRYYITTALVIAVLQLFLFNFAKTVSWLFNLSSKNRKTVGIL
                     TFLVANGLVILHLTRTFALFRIMAFILVLLLFAFFISFFTACIYKIFNGNTTVNRWLK
                     IAYPFAFFGLLGLGYYNAYTPTVVHYSVKLDKPLEKPLRIGMASDLHLGKLFGTKQLD
                     QLAEIFNQQKVDLILLPGDIMDDNTEVYVADKMQPHLAKLKAPLGVYATLGNHDFFGA
                     QETIAKEITDAGITVLWDQTAEINGKFTLIGRNDDLVKNRPSAEQLLQNVNTKLPVIL
                     LDHRPTEIEQHAKLPIDIQVSGHAHKGQVFPASIITKLIYRLHYGYEKIGFGHYFVTS
                     GYGFWGVPMRLGSQSEVMIIDVEGENP"
     gene            complement(37399..38379)
                     /locus_tag="PXD18_000288"
     CDS             complement(37399..38379)
                     /locus_tag="PXD18_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDL6300757.1"
                     /translation="MLFDSIQFSIGVTLPTILLMLFGIFPRRRKFIDDTFCNMASKVV
                     FNFTLPPMIFLNMLKSPLDFSSQINLISTGVGGSILIYLWAEWWAARHIENRRYRCIF
                     TQGTFRTNAAILGIALILNAYGDKALAAASVYISCLVITFNVLAVITLTSSLSEKKVN
                     FGRLILSILRNPLILAVIAGLTFNYFELSHQIPTPLESAGKLMASLTLPLALICTGAS
                     INFKQLKQFNQGVESTINKIVLFSASIRLIFAPIFLLLLGKFVFQLPPMELGIVFVAA
                     SAPVASATYAMTRNYGGDGEAAANLIGITTLGSMFSASIGLFLLRQIGWV"
     gene            complement(38482..39580)
                     /gene="prfB"
                     /locus_tag="PXD18_000289"
     CDS             complement(join(38482..39504,39506..39580))
                     /gene="prfB"
                     /locus_tag="PXD18_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014550889.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HDL6300758.1"
                     /translation="MFELNPIKNQLTDLSERTAVIRGYLDFEHKVERLEEVNAELEQP
                     DVWNKPEKAQALGKERAMLEQIVNTIKALEQGIEDVEGLIELAVEAEDQDTFNEAQVE
                     ADELEKKLADLEFKRMFSGPHDSADCYLDLQAGSGGTEAQDWTEMLLRMYLRWAESKG
                     FKAELMEASDGDVAGIKSATVKISGDYAYGWFRTETGIHRLVRKSPFDANNGRHTSFS
                     AAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQN
                     GRSQHQNKDQAMKQLKAKLYELEMSKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIK
                     DHRTGVEHRTTQQVLDGDLDKFVEASLKAGL"
     gene            39836..40744
                     /locus_tag="PXD18_000290"
     CDS             39836..40744
                     /locus_tag="PXD18_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HDL6300759.1"
                     /translation="MAKRPSDIDATLLQLEILRRIPKLPAKIDAKSLHQQLLDAGFER
                     DIRTVQRSLKMLCEHFDIECDERSKPFGYSWKIRSEGLALPILNEQQSLLLKLAEQQL
                     KYLLPANLMASMKPFFEQADRMVSGAKDKPEYQWLNKVCSTPTSLPLIPAKIKEEIFN
                     SVSQALFQNKLLKIEYQNQHGKKHQATIMPLAISQQGASIYLVCRYEGFDDNRLLALH
                     RIRKAEISTFSFERPKDFNLQAYQDAGHLGFGNGEKASLTFSISRDAGFHLTETPLAK
                     DQKILEESETHYRIQAIVADNDMLTW"
     gene            41045..41686
                     /locus_tag="PXD18_000291"
     CDS             41045..41686
                     /locus_tag="PXD18_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HDL6300760.1"
                     /translation="MPFQLTFCQQAGNQHQKNQDALFNGKAVYQWQLKNAESYLLDND
                     KVIFGVADGVSSHPRNHLASHYLMALLSQCQSLDSQWLRQAHGDFCEKLAKDYFGASC
                     TFVACELHHNGRGRMVNVGDSRAYKITANGEWQQLSFDHTILAEMKQKGLVKEGSNYA
                     SMYNGLTDCIVADFDADDFRIHIAEFQLEKGESILLCSDGLHEQLAPEAIQAI"
     gene            41853..>42058
                     /locus_tag="PXD18_000292"
     CDS             41853..>42058
                     /locus_tag="PXD18_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005637830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HDL6300761.1"
                     /translation="MKNDFHYAAELIRNADGILITAGAGMSVDSGLPDFRSVGGLWNS
                     YPPLKKFNLQFMQIATPLAYQERP"
BASE COUNT        12198 a         8549 c         9387 g        11924 t
ORIGIN      
        1 tatctctttt gttcaaggca agtatggata cctgaccgca ggcctggaga tagaacctac
       61 atataatatg ctctactaca ttaagccata aaaaatagaa aatcaagtgt ttgttcaagt
      121 ttttatgtta ttgaatttac aataactaca aaaatttatc ttaattggct cgattgattt
      181 ttacacaaaa catagctaac atatccaaaa tcactcacat taggagctta aaaatgacag
      241 cgattactat ccctcaattt gaagaggtga cttctaagca atttcaatct gagttcggca
      301 gaattgttga tatcgtaaaa ggcaaaaccc ctgtggcgat tacccaatat ggcagaccga
      361 caatggtgct ttttccttac gatcaagcgg ttgaagctcg gcgattatta gcaaaacagc
      421 gtttgcttga aatgcttgca gagcgagata agaatccgcc ggcagctctt gcagaaatca
      481 cgcttgaaga gttggataaa atgattgatg aggaacgtaa tgcactctga ttatttagtg
      541 attgatacga atattttgat tagtggttta ttgttcccaa aatcaaatcc caatttagca
      601 gtgaaaaaag ccttattagg ctataccatt tgtgtctcgc aagcgacttt tgacgaattt
      661 ttagaagtct ccgctagacc gaaatttgct aaatatttca gtattcagga aagggaagaa
      721 tttattgcca atttgttgga tgcagtaaag tttgtggaaa ttaaagaaac gattacagat
      781 tgccaagatc ccaaagataa taaattttta gaagtggcga tcagtgcaaa agcgaagtat
      841 ttagtgacgg gcgataaaaa agatctcctc agtatgaacc cttatcggaa tgttgaaatt
      901 atttccgtca gcgaattttt agcggaaact cgctaatgaa acggtttctc actctttttc
      961 ttctcctttt ttcatctttt tcattagccg aaacccacca aatcggcatt ctcgctcagc
     1021 gtggggaagc ctacacccgc acccattggc agccttgggt ggattggtta aattcgcagt
     1081 ttcccaacga gcggtttgag ctggttccat tggggattaa cgaggcgagc cgccgggcgg
     1141 agttggattt tctgctgacc aatcaagctc agtttttcta tttgagtaac caaaatgtgc
     1201 gatggcttgc cacgctcaac agtccgtttt cggcaaatgg tgagcaaggg gcggtgggca
     1261 gtagcatttg ggtgcgtgcc gacagccatt atcagcagtt aagcgatctg aaaaatcaga
     1321 ctatcagtgc ggtggataac gatgctttcg gcggtttttt gcttgggttg tatcagtttc
     1381 atcaagcagg aatgcggcaa aatcgggatt tttcggtgca gtttagcggt tttccggtgg
     1441 aaaatgcgtt ggctttgctg gcggaaaaac aggtggaagc ggcgattgta ccggtctgtt
     1501 tgctggaaga gttggagaaa gagggcaagt tcaagcggtc ggattttcgc ttaattttgc
     1561 aaaacccaca ggcgcagggt tgccttgcca gcacgccgtt gttgccgaac tggtcgctgg
     1621 cggcaatgga aaatgtgcca aacgagctgg cggtacagct tgccacacgc ttgctaaaca
     1681 gccacaatcc cgacctaccc cgctggacgt tgccgttttc ttccgcccaa gccgatcaca
     1741 ttctgcgtga actgtatcgc cacccgcaac aaaaaagcct gtgggcaacg gtgctggatt
     1801 gggttcgtct caataaattc ggcttgttgg cggtggtgtt gttcattttg ctcaaccttg
     1861 tcgccctgcg ttatcaggtc tatcgcaaaa gcaaggcgtt acagcaggca cactgcaaaa
     1921 tgcagcagta tcagcaggaa ctgacccgag ccgaccgcct tgctttgttg ggcgagatga
     1981 caaccggttt tgctcacgaa ctgaaacagc cgttgtcggc ggtgcgaatg tacgccgagg
     2041 ggctgaaaag ccaaaacagc gatccttatc aacagcggat tttggataag ctgattgcgc
     2101 aggtagatcg ggcagtgaaa acgatgcaga gcattcggga ctgggcgcaa aaccgcccga
     2161 gtggtgaacc gcaagcggtc attttgaacc aattgattac taatgtgatc gagtttgtgg
     2221 cggtggaaaa tcgccagaat gcacaaatct cgctgattgc cgaccgcact tttcggctta
     2281 atttacacgc cacggtactg gaacaagtac tgacgaactg cctgctcaac gccctgcaag
     2341 ccggtgcaag cgagatatcg gtgcggttac aagcggtcga aaacgggctg gaaattgcaa
     2401 tcgaagacaa cggcggcggt ttttcccctg cccagcttga atttccgttt gtgccatttc
     2461 gcaccgacaa accacacggc ttagggctag gcttggtgct atgccaacgg ctgatgcaat
     2521 cgctcaacgg acggattgta ttggcgaacg gggagaacgg ggcgaaggta gtgcttttac
     2581 tccctcaaat ataaatgtag gggcaggtcc tgtgcctgcc cgtaaatcct atcaaattca
     2641 gggcgggcac aggacccgcc cctacggaaa aaagaaaaaa tgattattca cattcttgat
     2701 gacgaagaaa gcattttaga cgctatgtcg ttcctgcttg ccccgcttgg ggtggaaatc
     2761 caaacgtggc aatccagcct agattttttg gcacaggcgg atttacaccg gcaaggcgtg
     2821 ctgttactag atattcgaat gccgctgcca gacgggcaac aggttcatca acaactgcga
     2881 gaggcacaat cgaccctggc ggtggtgatt atgaccgccc acggtgatgt gccgatggca
     2941 gtcgctgaat tgaaaaaagg cgcagtggat tttctgcaaa agccggcaag ttttgaacag
     3001 ctaaaacagg cgattgcaca ggcggaaaaa gtaagtgaaa aagcggtgaa aattcgtgaa
     3061 atttcgcaaa attacgccaa attgacggaa aaagagcgta accttgtgcc actgattatg
     3121 caaggtttca ccaataaaca gatcgcagat aaattagcga tttcagtgcg tacggtggaa
     3181 gtacatcgag ccaatgtgat ggaaaaaatg caggcggaga gtttggcggg gctggtgcag
     3241 atgatcgggg agttacaata taaaggtagc ggaaattgct ctgctacctt tagtttcgac
     3301 ttttgccgta ttaatttact tctttaaact gaatcattcc cgcttcggca aaattgttat
     3361 cgtcatcttc gtataagaag gttttggctt caattttgac atcatcaaaa gcggtgtcgc
     3421 cttctatgcc ttcaatggtt tgaccgtgtt taatcccttt aaaatcaaac aatttcggat
     3481 cgcataagtg ggatggcacg atatcttgca aagcactgaa cattgtttct aaacgccccg
     3541 ggtattggcg atcccaagta ttcagcattt ctttcaccac ttggcgttgt aaattaggct
     3601 gagaaccaca cagattacac ggaataatcg ggaactgctt ggcttcggca tatttgataa
     3661 tgtctttttc tttacaatag gcgagtgggc ggatcacaat ttgcttgccg tcatcagaga
     3721 tcagtttagg tggcatactt ttcattttgc cgccgtagaa catatttaag aataaagtcg
     3781 ccagcatatc gtcacggtga tgccctaatg caattttggt tgcacccaat tcggtggcgg
     3841 tgcggtataa aatcccacgg cgaagtcgtg agcaaagtga acaggtggtt ttgccctccg
     3901 gaattttctc ttttacgatg ccgtaggtgt tttcttccac aattttgtat tccacgccaa
     3961 tgctttctaa atagcgaggc aatacctctt ccggaaatcc cggttgcttt tggtctaaat
     4021 tgaccgctac cacactaaaa ttcaccggtg cactttgctg taaattgagc aaaatatcta
     4081 acagcgtata gctgtcttta ccgccggaaa ggcagaccat tacacggtcg ccctcttcaa
     4141 tcataccaaa atcggcaatg gcattaccga cattacggcg taaacgtttt tgtaacttgt
     4201 tgaaattata agtaattttt ttatcagatt tttgaatatc gtctgtcata atagttgtac
     4261 taggcttaga aattagcggt gtatagtaaa gatttcgcac tattttgcaa gttaattatt
     4321 cggcttcagc gtagcgatat agttacaact cacatcatta ttgagccaaa atttttcggt
     4381 taatgggttg aaatggtagc ctctcatctc ttggcaacgt aaatcagcct gatcgcacca
     4441 agctaacaat tcggcaggct tgatgaattt ttcaaattcg tgcgtgcctt ttggcaacat
     4501 tttcagcaca tattccgccc cgataattac caacatatag gctttaaaag tacggttgat
     4561 ggtagagaaa aacagcacgc cgtcaggttt gagcagggct ttacagcttt gaatgataga
     4621 aagcggatcg ggaacgtgtt ccagcatttc catacaagta atcacatcga atttttcttg
     4681 attacaagcg gtcatttttg ctaaaaaatt ttcaatcgtg gtttgttggt aatcaatctc
     4741 taacccactt tctttggcgt gctgctttgc cacttcaagc ggttgagagg tcatatcgat
     4801 gccggtaaca atcgctccct gttttgccat tgcctcactt aaaataccgc caccacagcc
     4861 gacatctaac acctttttgc caaataaacc gttcgatttt tctaaaatat aggctaaacg
     4921 cagtggatta agcagatgaa tcggcttgaa actgccgttt ggatcccacc aggttttagc
     4981 catattttca aattttgtga tttcttgctg atcgacgttt tgcataaact gttcctatgg
     5041 taaatttagg gcattactat aacgcattta gcctaaaagg aaaatcagaa tgacccgaat
     5101 taaccttgtt ccgccaacgg aattatgcga tcaacatctg cttgccgaac atcgtgaact
     5161 tactcggatt ccgaatgcgg tagcgaaagg caaatttagc ctaaaaggac agccagaaga
     5221 ttacaaactg ggcgagggac acgttcggtt tttcttcaat aaactcacgt ttttgaaaaa
     5281 gcgttacgat gcgttacacg aggaatgttt agcaagaggt tttaaggtgc aatatttctg
     5341 ggcggaacat ttaccacaag atccctctct ctggctagat tatcagccga ctgaaaccgc
     5401 tctgactgta aatcgggagc gaattgcatt aagaatgccg gcaaatccac gttttagcga
     5461 aagaaaatga ccgcttgtac gcctttttgt tgctttttat gctataatct cgccaatttt
     5521 ttcgccttat ttaaggctct tttactaata aaattaggaa atttcaatga gcgaattagc
     5581 caaagatatt attcccgtaa gtattgagga cgaattaaaa acctcttacc ttgactatgc
     5641 gatgtcggtg attgttgggc gtgccttgcc tgatgtacga gacggtttaa agccggtaca
     5701 ccgccgagtg cttttttcaa tggatcaaaa cagcaacacc tataataagc cgcacgttaa
     5761 atctgcccgt gtggtcggtg atgtgatcgg taaatatcac ccacacggtg actctgcggt
     5821 gtatgacact attgtgcgta tggctcaacc gttctcacta cgttatatgt tggtggacgg
     5881 gcaaggtaac tttggttcta ttgatggcga tgcaccggca gcaatgcgtt ataccgaagt
     5941 gcgtatgcag aaaattacgc aggaattatt aaccgatctc gataaagaaa cggtggattt
     6001 ctcaccgaac tatgacggca aagagatgat tcctgatgta ttgccaacca aaattccggc
     6061 tctgttagtc aatggttctt cagggattgc ggtcggtatg gcaaccaata ttccacctca
     6121 taatttaggc gaagtattag atggttgctt ggcgtatatt gaaaatgaac agattagtgt
     6181 tgaagagcta atgcgttata tcccggggcc ggatttcccg accggggcga ttatcaacgg
     6241 tcgtaaaggg attgaagagg cttaccgcac cggtcgtggc aaggtgtatg tgcgcgcgaa
     6301 agccagcgtg gaaacaactg ataaagggcg tgagcaaatt gttgtaaccg aactgccata
     6361 ccaagtgaat aaggcaaaat taattgaaaa aattgccgag ctggttaaag agaagaaaat
     6421 cgaaggcatc agcaaaattg atgactattc cgataaaaaa gggatttcga ttgttattga
     6481 agtcaagcgt gatgcagtgg gtgaagtggt gttaaaccac ctttattctt taacccaaat
     6541 gcaggtcacg tttggtatca atatggtggc gttagataat gggcagccaa aagtgctgaa
     6601 cttacgccag atcatcgaag cctttgttaa acaccgtcgt gaagtggtca cacgccgtac
     6661 gatttttgaa ttgcgtaaag cccgtgaacg tgcccatatt ttagaaggtt tggcgattgc
     6721 gttagcgaat atcgacccgg taattgaatt aattcgagcc tcaaaaaccg cagaagaagc
     6781 ccgtgaaggc ttattggctc gcccttgggc attaggcaat gttgcaccaa tgttagaggc
     6841 tgctggtgtt ggtgcttccc gaccggaaga tttacctgaa cacttaggag tgcgtgatgg
     6901 cgaatactat ttatctgaag ctcaagccag agcgatttta gagctacgct tacaccgctt
     6961 aaccggttta gaacacgaga aaatcgttga agaatacaaa gaactcttaa ctgaaattgg
     7021 cgaattaatc cacattttaa ccagcccaga acgcttaatg gaagtgatcc gtgaagagtt
     7081 agaacgtgta aaaaccgatt ttaatgatga acgccgtact gaaattaccg cagcctctgg
     7141 cgacatcaac attgaagact taatcgcaca agaagatgtg gtggttacgc tttctcacgc
     7201 cggctatgtg aaatatcagc cgttatccga ctacgaagca caacgccgtg gcggtaaagg
     7261 taagtcggca accaagatga aagaagatga tttcatcgaa aaactcttgg tggcaaacac
     7321 ccacgacacc attctttgct tctcaagccg tgggcgttta tatcaattaa aagtgtatca
     7381 attaccgcaa gcaagccgtg gggcaagagg cacgccgatt gtgaatattc tgccgttagt
     7441 gaaagaagaa aacgaacgta ttaccgcgat tctaccgatt ccaaacggtg aatttagtgc
     7501 cgataagttt atctttatgg caacagctag cggtgtagtg aaaaaagttt cccttgatgc
     7561 ctttagcaac gtgcgtgcaa gcggtctgat tgcgttaaaa cttcgtgaag gcgatgagct
     7621 gatcggggta gatattactg atggtaacag cgaaattatg ttgttctcgg cacaagggcg
     7681 agtagttcgc tttgccgaaa cagcagttcg tgcgatggga cgtaccgcca ccggcgtacg
     7741 aggtattaaa ctttctacca ccgaaatttc aagcgaagaa attgaagaag ctgaaattat
     7801 tgaaactgac aatgaagagg cagaagattc ctccagcgtc agccttgata aagaccgtgt
     7861 ggtttcttta gtgattcctc gcaccgaagg cgatatttta accgtcaccc aaaacggcta
     7921 cggtaaacgt acggtgatta gcgaatatcc ggtgaaatcc cgagcaacca aaggggtcgt
     7981 ttcgattaaa gtgaatgaac gaaacggcaa agtggttgcg gcagttcaag tagaggaaac
     8041 cgaccaaatt atgttgatta ccgatgccgg cacgctggtt cgcacccgag tggcagaagt
     8101 cagcctcgtt ggacgaaaca cccaaggcgt acgtattatt cgcaccgcag aagacgaaca
     8161 agttgttagc cttgaacgag tctgcgagcc tgaagacgat gaaaatgaaa gcctagacgc
     8221 attagaaaat gccgaaacag cagaaacatc aactgaagaa taatcttaac taaacaagcg
     8281 gtcgaatttt cacaattttt tgcaaaaata gaaggaaatt cgaccgtttt tggatcatac
     8341 agtagataat aaaaactatg gcacttatca atctttccaa cgcctattta ggctttggcg
     8401 atcatccttt attggatcat actgaattac atatcgaacc cggcgagcgg gtttgtttgg
     8461 tggggcgtaa cggggcgggt aaatcgaccc tgatgaaaat tctggcgggc gaagttcagc
     8521 ttgatgacgg caagttggta tttgaaaaag acattgtcgt tacacgtctt gaacaagatc
     8581 cgccccgcca tattgaagaa acggtgttcg attatgtggc ggaggggatt gcccatcttg
     8641 ccgacttatt gaagcaatat caccacattt ccctgcaaat gcagaccgat tacagcgatg
     8701 aactgctcgc caaactttca gcggtgcaat cgcaattaga acacgctaac ggttggcagt
     8761 ttgaaaaccg cattcaagac accttgaaac tgctggaact cgcccccgac aaacgcctgt
     8821 gcgaactctc aggcggttgg gtacgccgtg cggcattggc tcgggcgttg gttgccgatc
     8881 ctgatgtatt gctgttggac gaaccgacca accacctcga cattgaggcg attgcgtggc
     8941 tggaaaatct gttattggat ttcaaaggca gtattatttt tatctcgcac gaccgtgcct
     9001 ttatccgcaa aatggcgact cggattgtgg atttagatcg aggcaaattg gtttcctacc
     9061 caagcaatta cgataaatac ttggaagaaa aagccgagga tctgcgagta gaagcgttgc
     9121 aaaatgagct gttcgacaaa aaactcgccc aagaagaagt ctggatccgt caagggatta
     9181 aggcaagacg cacccgaaac gaagggcgtg tgcgagcgtt gaaagcgttg cgtgaagagc
     9241 gtagaaaccg ccgagaggta caaggcacgg cgaaaattca gatcgacaac accgcacgca
     9301 gcggcaaaat tgtgtttgaa gtggaaaatg ccggctatga aatcggcggc agaaccctgc
     9361 tgaaaaattt cagcaccacc attttgcgtg gcgataaaat tgccctgatt ggagcgaacg
     9421 ggatcggcaa aaccacgctg atcaagctgt tacttggcga aattcagccg acatctggtt
     9481 cagtgcgttg tggcacaaaa ttggaagtgg cgtacttcga ccaataccga gtcgatcttg
     9541 accctgaaaa aaccgtgatg gacaacgtgg cagacggcaa gcaagatgta gaagtaaacg
     9601 gggtgaaacg ccacgttctt ggctatctgc aagacttcct gttcccgcca aaacgggcga
     9661 tgacaccggt gaaagccctc tcgggtggtg aacgcaactg cttgttgctg gcaaaactgt
     9721 tactcaaacc gaacaacttg ctgattttgg acgaaccgac caacgatttg gacgtggaaa
     9781 ccctcgaact gctggaagag atgctcaccg actatcaagg caccctgatt attgtgagcc
     9841 acgaccgtca atttgtggat aataccgtaa ccgaatgcta cttcttcgag ggcgaaggcg
     9901 tggtgaataa atatgtcggc ggctatttcg atgccaaaca acagcaggaa aattacttcg
     9961 ccgccactgc cgacaagcgg ttaaattcga gtaaaaattt gcaaaaaata gaggaaaaag
    10021 caccgcttgc ggagcaagag aaacagaaag ccgatcagga aaaaacgaaa gcagagccga
    10081 cgaagaaaac caaactttcc tacaaagaac agcgtgaact ggacgagtta ccggctaaaa
    10141 tggaacagct tgaagccgac attgaagccc tgcaagccga agtaaatagt gccgaattct
    10201 tcgccaaaga tccaagctac accaacgccc agctacaaaa acttgccgat accgaagccg
    10261 cgttagagca agcctttgag cggtgggaag cgttggaaaa tattaaaaac gggaatatct
    10321 aatgtagggg cgaatgatta ttcgcccttg atggataaaa tgattgggcg aaaaattttt
    10381 cgcccctaca aatgtgaagc aaaatgacag aaagattaga taactacgaa caacgttttg
    10441 gtggcattgg tcgcctttat acgccggaag gattggagaa actacgccgt tcgcatattt
    10501 gcgtgattgg gattggcggg gttggctcgt gggcagtgga ggcattggct cgctcaggta
    10561 tcggtaagat cacgatgatc gatatggacg atatttgcgt gaccaatatc aaccgccaaa
    10621 ttcacgcaat gagtggcacg gtggctcaac tgaaaaccga agcgatgaaa gagcggattg
    10681 agcggatcaa ccctgaatgt gtggtggaaa ttattgatga tttcttaacg caggataatc
    10741 tcgcagacta cctcaatcga ggatatgact atgtgatcga tgcgattgac agtttgcggg
    10801 taaaagcggc gatgattgcg ttttgtaaac gcaataagat caaaattatc accaccggcg
    10861 gggcgggcgg gcagaccgat ccgaccaaaa ttcaaattac cgatttaagc aaaacggtgc
    10921 aagatccgtt ggcggcaagg gttcgtagcc tgttgcgtaa agagtacggt ttcagcaata
    10981 aaaacaaatt cggcgtggag tgcgtttctt cgactcagca actgattttc ccacaaatgg
    11041 gtgaggcctg tgaggtgtcg gcaacaatga actgtgccaa cggctttgga gcggtgacaa
    11101 tggtgacggc aacgttcggc ttttttgcgg tgagtcgggt gattgataaa ctattaaaat
    11161 aacaagcggt catattaaat gaattttttg caaatcaagg agtaaataat ggcaatacat
    11221 cgagtcaacc cgaaagggag tatggaacag ctttcccatt tggaaatgga gttgttggca
    11281 aagaatacgc agggtaattt gcatcaactt tatcgtaatt gctctttggc ggtgctaaat
    11341 tccggtgtgc ataccgatga cagccgagcg ttgttaagcc aataccctga ttttgaaatc
    11401 cgcttattaa cccgtgaaaa aggcgtgtcg cttgaattgc ataatccacc cgaaactgcg
    11461 tttgttgacg gcaagatgat tttgaatatt caatatcacc tttttgcggt gctgcgggat
    11521 attgtgtttg tgaatgcgtt aaaaaatgcg attagaccgc ttgaagagac ttctttagaa
    11581 gccttaacca cgaataccgt attttcgatt ttgcggaatg cgaaagcgat tgaaatgaat
    11641 accgacccaa atttggtggt gtgctgggga gggcattcga ttaatgaaac cgaataccaa
    11701 tattgccgtg ccgtcgggca agagtttggc ttgcgtgagc tgaatattgt gaccggttgc
    11761 ggagccggtg tgatggaagc cccgatgaaa ggagcggcta tcggacacgc caatcaacgt
    11821 tataaaaacg ggcgttttat cggcattacc gagccgtcta ttattgcctc cgagccgcca
    11881 aacccgattg tgaatgaatt ggtaattatg ccggatattg aaaaacggtt ggaagccttt
    11941 gtgcgtttag ggcacgccat tgtggttttc ccgggcgggc cgggaacgct ggaagagttg
    12001 ctgtatatta tcggtattaa gttaaacccg gctaaccatg ctcagcaatt accactgatt
    12061 ttaaccgccc cgaaagaatc ggcagactat ttctatgcca tcgatcaatt tattggcgaa
    12121 actttaggcg aagaagctcg cagtttgtat gaaattatta ttgatgactc ggtgttggtg
    12181 gctcgtaaag tcaagcaagc gatgattgag gtaaaaagca gccgttatga aagtggcgat
    12241 gcttataatt tcaactggtc gttaaaaatt gaggaagatt ttattacgcc atttattcca
    12301 acccacgaaa atatggcaaa cctgaattta agtttagcac agccaaaaga gcagctggct
    12361 gcgaatttaa gacgggcatt ttcagggatt gttgcaggta atattaagcc ggagacctcc
    12421 gatttaattg agaaatatgg ggtgtttaaa ttacacggcg atcgtaaatt aatggagcat
    12481 atagataaac tgttggagcg ttttgtggtt caacaccgta tgaaaattcc aacgggtgag
    12541 gcgtaccaac cttgctatga aattgtaaaa gggtaatgct aacaaggggt aaggtatgta
    12601 tttaaagcat attgaaatca gtggctttcg tggtattaac catttatcgc tccagctacg
    12661 accaaatatg gtattgattg gcgaaaatgc gtgggggaaa tccagtctga ttgatgcatt
    12721 aagcctgatt tttaaccttg agcaggcgtt gtatcaattt cagttcaaag atttccatat
    12781 tcaatacacc gataccccca accaagtgcg ggacattcaa ctggtgttta ccttttgtga
    12841 agagcatcag cacgatttag cggtgcaatt tcccgcttat ttggcacaag ccgcgtttta
    12901 tattgataat caccgctgtg tttcgcttgc cgtaaccgga aaattacacg gagagcagat
    12961 tagcaccgac tatcaatttg tggatcaaag cctaaaaccg atccagatag aacaagcgga
    13021 aaacgccatt cggcagttta tttaccatca ccctgtttat cgcctgcgtg atgcaaggct
    13081 caataacagg gtgcataatg aattattact taaaggatcg tctcaacttg aagacgattt
    13141 tcaacgtgaa ttaaacgccc tctcttcgct actgaaatac tattttctaa ccagccaaag
    13201 tcgctatttg atcaaaacca gtatgcaaga caccgcattg tggtgggaaa aagtaaaatc
    13261 cctctgttta cgcctaaaac agcagccgga attggtcgaa tctgctcagc agcatatttc
    13321 tactctattt ttgtttaatc ctagatctac agtaatagaa aagccgatta ttttatttga
    13381 agatctgaat gctcaactac accctcgaat gattgcgatt ttttgggaac tgctcggttt
    13441 tttacccagc caacggatca ccactactaa ttctattgaa ttgttatcgc aagtgcctct
    13501 gcgtgaaatc tgccgtttgg tgcgtcatca cgatcatacc caagcctatt ggcttgaacg
    13561 ccacagttta ggcaaggaag atttgcgaaa attaaccttt catattcacc ataatcgtgg
    13621 cttggcactg tttgctaaag cgtggatttt ggttgagggg gaaacggagg tttggatttt
    13681 gcaagagctg gcgagattat tagatattca tttggaaatg gaagggatca aaatcgttga
    13741 atttgctcag tgtggcttac gtccgttaat taaatacgcc agagcaatgg ggatcgaatg
    13801 gtatgtgctg actgacggtg acgattccgg caaacgttat gcagatacgg taaaaagtat
    13861 ggaagaggat tttgctcacc ggctcacgat gttgccacaa aaagatatcg aacatttttt
    13921 ctacaaagca ggcttgcgga atgtgtttat acagcttgca aattggcgtt cacaagaaaa
    13981 atatccggtg tcctacatca ttaaacgagc gattcaacga agctcaaagc ctgatttagc
    14041 cattgcatta gccaatgaga tggggcaacg gggagagcat tcaattccaa ctttatttaa
    14101 acaattattt gcagatgtgc tggcattgat aaacaaagta tagaatacaa gcggttaaat
    14161 ttgacaaaaa attgccaatt ttgaccgctt gtttgcttgt gatgaaaacc aatcatacaa
    14221 aactctaatt tatttcaagt gcaagctatt attttatgcg ttatgcttat ttggaataaa
    14281 aaaatcgggt tagttgattg acatagcatt ctagacgtct aaaataacca aaaataatag
    14341 ttaattgaat gtggataaat agaaaatgat tcagctgaaa aatatcagca aacaatttga
    14401 ggtaaagggc aaaaaaatta ccgctctgga taatgtaaac ctagaagtac caagaggcac
    14461 tatttatggt gtcattgggg catcaggggc aggaaaaagt accttaattc gctgtgtaaa
    14521 tttattagaa cgcccaacaa tcgggcaagt gattgtcgat gggcaagatt taacggcaat
    14581 gtcggataaa gagttgattc acgctcgccg taatattgca atgattttcc aacattttaa
    14641 tttgctttca tcacaaactg tatttgaaaa cgtggcgtta tcgttgcgtt taagcaatac
    14701 gccaaaagag caagttgaga agaaagtcaa tgagctgttg gatttagtgg ggttaacaga
    14761 tcgtaaagat gtttaccctg caaatctttc cggtgggcag aaacagcgtg tagcgattgc
    14821 tcgtgcgtta gccagcgatc cacacgtttt gttgtgtgat gaagcgacca gtgcgttaga
    14881 tccggcgact acgcaatcca ttttgcagct attaaaagat attaataaac gtcttggttt
    14941 gacgatttta ttaatcactc acgaaatgga agtggtaaaa cgcatttgtg accgagtagc
    15001 agtgattgat aaagggcagt tgattgaatc tggctcggta agtgaaattt tctcgaatcc
    15061 gaaaaccgaa ttagctcaga aatttattca atcgactttc cattttgaat taccgcaaga
    15121 atataccgag cagctttcaa gttcgccgac tgaacatagt aagccgatta ttaaatttga
    15181 gtttaccgga cgttcggtgg atgcaccttt gctttcaatg gcatcgaaga aattcggcat
    15241 tgattttagt attttgatgt cgcaaattga ttatgcaggc ggggtcaaat ttggatttgt
    15301 aattgcagaa gtgagtggta atccggattc cattgcagag gcaaaatttt atttaattga
    15361 taacaatgta aaagtagagg tgttaggcta tgtgggctga ttttatgcag gagatgacgc
    15421 cacagatgtg gagcttagta tgggaatcta cttttgaaac cgtttatatg ggctttgtgg
    15481 caacggcatt ggcggtagtc atcggtttac cgattggttt cttggcgttt ttaaccggta
    15541 aaggcgaaat tttagaaaat ccgagattac accaagtgtt agatgtcgtt attaacatcg
    15601 ggcgttcgat tccgttcatt attttattga ttattttgtt gccatttact cgcttagttg
    15661 tgggcacaac attaggcaca acggcagcga ttgttccttt aagtgtttcg gccattccgt
    15721 tttttgcccg tttaacttca aatgcgttgc ttgaaattcc gtccggttta acagaagcgg
    15781 caaaatcaat gggagcaaca aattggcagg tagtgacaaa attttattta ccggagtcat
    15841 taccgatttt gattaatggc attacgctaa cgctggttgc tttaattggc tactcagcaa
    15901 tggcgggggc tgttggtggc ggcggtttag gcaatttagc gattagctat ggcgaacacc
    15961 gtaatatggt gtatgtgaaa tggattgcta ccattattat tgttgcgatt gtgatgatta
    16021 gccaaaaatt gggtgatcat ttagcaaaac gttacgatca tcgttaattt tatttaaaaa
    16081 gaggtttcta tgagtttcaa gaaaatttta ggcgttgcat tggtttctgc attagcatta
    16141 accgcttgta aagaagagaa aaaggcagaa tctaccgctg ctccggcagc tcaagctccg
    16201 gctaaaatca aagtaggggt aatgtcaggc cctgagcata ccgttgcaga acgtgcagca
    16261 cagattgcaa aagaaaaata tggtttagaa gttgagttcg ttttatttaa cgactacgct
    16321 ttaccgaata ctgcagtaag taaaggtgat ttagatgcaa acgcattcca acacaaacca
    16381 tatttagata aagacagcca atcaaaaggt ttaaacaact tagtgattgt gggtaacacc
    16441 tttgtttatc cgttagcggg ctactctaaa aaagtgaaaa atgtgtctga gttagcagaa
    16501 ggtgcggtaa ttgcagtacc aaatgatcct tcaaacttag ctcgtgcttt gattttatta
    16561 gaaaaacagg ggttaattaa attaaaagat aataccaatt tattctcaac ttcagtggat
    16621 attatcgaaa atccgaaaaa cttaaaaatt aaagaagtgg atacttcaat tgccgcaaaa
    16681 gcgttagatg acgtagattt agcggtggta aataacactt atgccgggca ggtaggctta
    16741 aatacccaag atcacggtgt atttgttgag tctaaagatt caccgtatgt gaatattatt
    16801 gtggctcgcc aagacaataa agatgcagct aatgtacaaa actttattaa atcttaccaa
    16861 accgaagaag tgtaccaaga agcacaaaaa cactttaaag atggtgtagt aaaaggttgg
    16921 taatttagct gatttttact taaatggcga ttaagcgcta ggttaatcgc cattttcatc
    16981 tttaaaatat aggaaggagc aaacaatgaa ctttaaaaaa ttattaggtg tggcgttagt
    17041 atctgcctta gcacttactg cgtgtaaaga tgaaaaagca caagcacctg ctacaacagc
    17101 taaaactgaa aacaaagccc cattaaaagt gggtgtgatg accggccctg aagcccaaat
    17161 gaccgaagtg gcagtgaaaa ttgcaaaaga gaaatatggc ttagatgtag agttagtgca
    17221 gtttactgaa tacactcaac caaatgccgc acttcattct aaagatttag atgctaacgc
    17281 gttccaaacg gtgccttatt tagagcaaga agtgaaagat cgtggttata aattagcgat
    17341 tatcggcaat acgctagtat ggccaatcgc ggcttattct aaaaaaatta aaaacatttc
    17401 cgagttaaaa gacggagcga ctgttgcgat tccaaacaat gcaagtaata ctgctcgtgc
    17461 gttattattg cttcaagctc acggtttatt gaaattaaaa gatccgaaaa atgtgtttgc
    17521 taccgaaaac gatattatcg aaaacccgaa aaatatcaaa atcgtacagg cggatacctc
    17581 acttttaacc cgtatgttag atgatgtaga acttgcggta atcaacaaca cttacgcagg
    17641 tcaagctggg ttaagtccgg ataaagacgg tattattgtg gaatctaaag attcaccgta
    17701 tgtgaattta gtggtaagtc gtgaagataa taaagatgac ccacgcttac aaacttttgt
    17761 gaagtcattc caaaccgaag aagtattcca agaagcgtta aaattattta acggtggtgt
    17821 ggtgaaaggt tggtaatcag ttggacggca tattctgccg tccttttctt aaaaggagaa
    17881 acagataatg aaaataatga aattagccgg tgcagttgca attttctcgc tttttttaac
    17941 cgcttgtaat gataaagccg aaaagttgaa agtcggtgtg atttccggcc ctgaacataa
    18001 ggtaatggaa gtggcggcaa aaattgcaaa ggaaaaatat aaccgtgatg ttgaattagt
    18061 ggtatttacc gattatgcca cgcctaatgc agctttagat aaaggcgatc ttgatttgaa
    18121 tgctttccag cataaacctt atttagataa ccaaattcag gaaaaaggct ataaattagt
    18181 gccggtcggc aatacttttg tttatccgat tgcggcttat tccaaaaaaa ttaaatcgct
    18241 ggcagagttg aaagatggtg atactattgc agtgcctaat gatccgacta atttagcccg
    18301 tgctttaatt ttattggaaa aacaagattt aattaagctg cgagcagatg caggcttaaa
    18361 agcaaccagt gtggatatta ttgaaaaccc tcgtaaattg gtgatccaag aaattgaagc
    18421 accattattg cctcgaacgt tggacgatgt tgccttttcg attattaata ctacctacgc
    18481 agggcaaaac ggtttaacgc caaccaaaga cggaatattc gttgaagaca aggattcgcc
    18541 ttatgtgaat ttaattgttg cccgtgaaaa taaccaacat tctgaagccg taaaagattt
    18601 ggtgaaagcc taccaaacag aagaggtgta taacaaagcg aatgaagagt ttaaaggggc
    18661 gatgataaaa ggctggtaat tgaagataaa taaggcatag attcctatgc cttacttttt
    18721 atgttacaga cctgctccgg ctcttaatgc ttcggctttg tcagtttttt cccaaggaaa
    18781 atgtttacga ccgaagtgtc cgtaggcagc ggtttcacgg tagattggtt tgattaaatc
    18841 taacattttg attaagccat acgggcgtaa gtcaaagttt tggtagatta atttcacaag
    18901 tatttcgttg ctcactttac ctgtgccgaa ggtttcgacc ataattgatg ttgggtcagc
    18961 caccccgata gcataagaaa gttggatctc acagcgatcg gctaagcctg cggcaacgat
    19021 attttttgcg acataacgag cagcataagc agcagagcga tccacttttg acgggtcttt
    19081 accagagaat gcaccaccac cgtggcgagc cgcaccaccg taggtatcta caatgatttt
    19141 acgcccggtt aaaccacagt cacccattgg accgccaatc acaaaacgac cggttgggtt
    19201 gatgaaatat ttggtgtttt ggctgagcca ttcgcttggt agtaccggtt tgatgatctc
    19261 ttccatcacc ccttcaatta actctttttg cgaaatatgc tctgcgtgtt gtgtagaaag
    19321 cactacggca tcaatgccga taattttatt gttctcataa gcaaatgtta attggctttt
    19381 agcgtcaggg cgtaaccaat cgagtttgcc cgatttacgc acttttgact gctgttccat
    19441 taagcggtgt gcgtaagtaa ttggagccgg cattaacacc tcggtttcat tggtagcgta
    19501 gccaaacata atcccttggt cgcccgcacc ttgctctaac ggatcggcac ggtcaacgcc
    19561 ctggttgatg tccggagatt gtttaccaat cgcatttaat accgcacaag agtgagcatc
    19621 aaagcccata tcagagtgag tatagccgat gtcgcaaatc acttggcggg ttaagttttc
    19681 aatatccacc cacgcagagg tagtgatttc tccccctact aatgccatac cggttttcac
    19741 ataagtttca caagcaacgc gtgctttagg gtcttgtttt aaaatttcat ctaataccgc
    19801 gtctgaaatt tggtctgcga ttttatccgg atgcccttct gaaaccgatt cagaagtaaa
    19861 taaattaatt gccatttgta ttcctctcta tcttaaatat ggattattaa tagtaggggc
    19921 gggtccagtg cccgcccata aattatataa aatgtttgga caggcacagg accggtccct
    19981 ataaaatttg tttggaagtg tttccgtcta gacgtctata atatattttt tgaacgtttt
    20041 aggcaaatag aatttgttta tttggctaaa tatgccctta aaccagccaa cgcatttttg
    20101 gcatcttcta cccctaaatc gtacattgct tgtattttat ttacatccgt ttcaaggcga
    20161 ctgattttga ctgttctgct tggacgaatc acaaaaatct gttgtttttc attgagttga
    20221 ataatctgct caacggcttg attatattcc gcatagcggt tttcccagcg ttgcactaat
    20281 ttcggatatt ttttataaaa acgtttaaac agccacatcg agcttggttt cttacggtat
    20341 tcaagtgggc gagtaagcac cacgataatt ttgtcatatc ccatttcaat aaatttctgc
    20401 accggaatac tgtctgacac accaccgtct aaatattttt taccctcaat ttcgactatt
    20461 ttggatacaa tcggcattga ggaagtagct cgaaaggctt ccatttgctc gaacacattg
    20521 tcaattttga tgtattcggg ctcaccggtt tcgacattgg ttacagtaac ccaaaagtcc
    20581 ataccggaat cctcaaaggc ttgttggtca aacggatcca gtttggaagg gagttcatag
    20641 taagcaaaat cccgattaac gatattgccg gtggtaagca agctgtgtaa ccccatatac
    20701 cgcttatctt tagcgtattt tttgttgtat cgcaacgccc tacctttttg ttttgaaggc
    20761 aaattcacgc caaataacgc accggctgaa acaccgattg ctccatctat atgaatatgt
    20821 tcatctaaaa atacatctaa cacgccggca gtaaaaatac ctcgcaaacc accgccttcc
    20881 agcactaatc caactttcat atcattctcc ctgtaatttg tgtattataa cccgaattat
    20941 cttgctagga gaaatcacaa tggctgatgc agaatttatg gatttcctgt tagatcaact
    21001 aagcccgatt tccggtttgc gttcgaaaaa aatgtttggt gaatattgct tgttttttga
    21061 taataaaatt gtcgctatta tcagcaaaga ttatcgcatt tttgtcaaag ctaatccgca
    21121 aaccttgccg ttattcttag ctgaaaatgc cgaacaattt cactattttg ctaaaggaaa
    21181 agtgcaaaaa atgcactact ggagcattcc ggaattagcg attgaagaag ccgatgaact
    21241 ggtcaaatgg attcggctag gcttacaagc ggtgtaattt agcgaaaatt ttgtaaaaaa
    21301 acgctaaaat atgcccgctt gttagggggg gggacctaat atttctatac tttaagattt
    21361 tatatttatg aaccaaaaaa aattagtttc tttgattgtc gttattgtgt tggcaatcat
    21421 ttctcaaatt tttagctttt ttgataaaaa agagccttca aaagcacaag aaaaatcgac
    21481 ccagagtagt cagtctcatc aagtttcaac ttcatcacta gggaactatg atgtgcagat
    21541 gaaaaacgac cgtttgaaac agcatattgt agataccgat tattacacct tagcgttgtc
    21601 gtggtcgccg gcgttttgcc aaaaacaaaa gcgaaataat cacggtaaaa ttccgtctca
    21661 tttggaatat caatgtggtg gctcagcgga ttttggttgg gttattcacg gcttatggcc
    21721 gcaaagtggc aaggcaagaa gtgttgatga acaccctcgt tattgccaag gcgatttgcc
    21781 gatggtggca gagcagacga ttaagcaata tttacctgaa tcgccggggg caactttgtt
    21841 gcaaggcgaa tgggaaaaac acggtgcttg tgcctttaac caagcggatg attacttcgc
    21901 caaacaaaaa gagctattta atcagctcaa attaccggat accgaaatgt ctaaattagc
    21961 actgtttaac tggatgcgag ccaataaccc tcatttgcaa aatgtctatt tagggggtag
    22021 caaagatgag ctgtatattt gctatgataa agcatttcaa ccaatggatt gcccacgcta
    22081 atggcagatc ttcgccaact gaaaatgcag gttcagcgcc aattaaagcg tgatcttgaa
    22141 cgtgcaaatc actattttaa taccactttt acgccaccaa gtattagcta tgcggtgcgt
    22201 ggcgtaaaag ccggtgtggc ttatcttgaa cgcaacgaag tacggtttaa tcctgtgtta
    22261 ttgcaagaaa atgaacaggc atttatccgc caagttgtgc cgcacgaact ggctcatatc
    22321 ttggtttatc aacattttgg gcgggtacaa tctcatggta aagagtggaa aatgatgatg
    22381 gaaaccgtac tgggtgtgcc ggcggaaatt taccattgtt ttgataccca aagtgtgcaa
    22441 cagcaattta gttaccaatg tgcctgccag actcaccagc tttcgattcg ccgacacaat
    22501 gccgtgatgc gagataaaaa aagctatatt tgccgtttat gtaaaactca actccatttt
    22561 gtagaaaaaa gttaatgtgg agaaaagtta agagaatgtt acgatttagc tagacattcc
    22621 tgtttaaacg cctacaattt gccgtagttt ttatttttaa ttttatttcc ggagtattta
    22681 tggaaacaat tgtaattgta ggtggcggtg caggcggttt ggagcttgca acctatctag
    22741 gcaacaaatt agggcgtaaa caaaaggcaa aagtggtgct gattgaccgc aatgcaacgc
    22801 atttatggaa accactgttg cacgaggtgg caaccggtac tattgatgag ggaactgatg
    22861 cgttaagcta tcgggctcac gctaaaaatc atagttttga atttcagcaa ggtacgctgg
    22921 tggcggtaga tagagagaag aaaacggttt cactcgcccc gatttataat gatcaaaacc
    22981 aacttctcgt taaagaacgc catatcagtt atgacaaatt agtgatcgcg atcggcagta
    23041 aatccaatga ttttggcacc aaaggggttg cagaaaattg cattttctta gatggctcag
    23101 agcaagcaaa agatttccaa aaacgaatga tggagctgtt tttacgtttt tcacatagtg
    23161 aaaataaaga tgtaaaaatt gcgattgtgg gggggggagc aacaggtatt gagctttcag
    23221 cggagcttta ccacgtggtg aaaaatttaa attcttacgg ctttggtaaa ttaaaccgtg
    23281 ccagcttgaa agtcacttta attgaggcag gccctcgttt gattccggca ttaccggaga
    23341 aagtgtcggt ttctgctttc cacgaattga aaaaagcggg tgtttcggtg cgtttaggta
    23401 cgatgattac cgaagctcgt ccagatgggc taatgacccg tttaggtgag aaaattgagg
    23461 cggatattat ggtttgggcg gctggcgtga aagcccctga aattacccgt gaatttggtt
    23521 ttgaaactaa ccgcttgaac caaattgaga ttaaagacac gctacaaacc accgttgatg
    23581 agtcagtgtt tgtcattggc gattgtgcat cattaattca agatggcaag ccaattccac
    23641 ccagagcaca agcagcccac caaatggcaa cccgatgtgg taaaaatatt gtggcattga
    23701 tagaaggaaa agagatgaag ccgtttcgat ttaacgataa aggctcactg ctttccttct
    23761 caaaattcgg cacggtgggt aatttaatgg ggaatttagt gagcggtgat atgtttattg
    23821 aaggtaaaat tgcccgcttg gcttacctct cgctttatcg aatgcaccaa gtggcattac
    23881 acggctgtgt caaaaccggc ttgattgtgt tggtagggca aattaaccgt ttcttaagac
    23941 caacaatgaa actacattaa acaaaaatcc gcatcaaatg atgcggattt tttatggcaa
    24001 aataacaagc ggttattttc ttgcctattt ttgcaaatac tcacgcctag tttgctaatt
    24061 taatttccgc caaccattta tcaattaagc gtttgccctc ttcgctggaa cctgcttttt
    24121 ggtaatcaat ttccacaaag tctaacgctt cggctttggt tgattgtgga gcaacttcgg
    24181 cgttgatgtt tgttggggtt tggtaaacac cgtgtttttt ccaaggaatt tcctgtgctt
    24241 cttttgaaag cacccaatcc ataaagagtt tggcgttatc taaattacgg gcatttttga
    24301 taatgctgac accgcctaac gcatagccca ctttaccttc cggaataatg gcttcaatag
    24361 gcgcaccttt ttctttttca gtggcataac tatgtacaaa gcctaccgta accgcacttt
    24421 caccacgagc aagattgctg gtgactaggg tgcttttcac atattgcgaa acgttattgt
    24481 tgagtttttt cagataatca aaggttttct cttcgcccca taaggttgaa agagtggtca
    24541 taaacgtata agtcgtgccg gagctacgag gatcaggcag ttgtacttca ccttttaagc
    24601 gaggatctga taaatcttcc cattttttcg gtgcctcaat gcctagtttg gcgagttttt
    24661 cggtattcac gcctaaccct aatacaagca tataaacgat agaggtaaat ttaccttgtt
    24721 cactttcaac taaggattta aattgtggca gaatttcagc ttgttttggt gaacggtagg
    24781 cttccagtaa gcctaattcg cctgcttgaa agtgaggttc aatcgtgccg ccataccaaa
    24841 tatctgcctg agggttcgat gcttccgctt ttacttttcc gaaaattgta ccggttccgc
    24901 cgtgaatgaa tttagtttcg acattatatt tgtgtgaaaa ttgcttggtc atttcttcac
    24961 aaacattatt ttgtaccgag caataaacag ttaaacgacc ttctgcttgt gctgcttgag
    25021 ctgataagaa aatgccagag gcgattaaga tcgattttaa tgagattaat ttgagtacgt
    25081 tcatcacttt cctgaaaaca taaaataaaa ggtagtgaag tctagcattt caaagcgctg
    25141 gttgaaaata gttaattgca atgaagtagg gcaattgtgc ctattacttt aatatttacc
    25201 aactatttgc aagttttagc aaaaaataac cgcttgtagt agctcttgct attttgtcaa
    25261 aattcagaat aataaatgcc tttagtctaa tgttaaattt tagttatgga aaatagttgg
    25321 aaatatgctt ttaaattaat cacgccgatt tttatgggct attttgcggc aggggttgct
    25381 tacggaatgc ttgccaccaa tgccggaatg cctgcgtggt ttacgattgt aatgagtttt
    25441 accgtggtat cggggacggc acaatatgca gcgattccat tttttgtctc cggtgttggg
    25501 gcggtgtcgg tctttctcag tacgctttta atgagtctac gttttagttt ttacacctta
    25561 aatatgatgg agcataagcc gatatccaaa gcgaaaagtc tggtcgctat tgcaggttta
    25621 actgatgaag gctttgcggt gttatcttca ttaccgaaag agcaaaagca agcattattc
    25681 tttaaaatcg ctgtgctatg tgtggcttat tggacatttt ccacgattgt cggtgtgttg
    25741 ttaggcgatt cagtggcgaa ctatattccg catttggatt ttgctctgcc ttgtttgttt
    25801 gcaattttag cctatgagca atacaaaaac caaaaacaat ggaaaccgat tgtgattgcg
    25861 ttaatcggat ttttacttgc tcgtcagatt accgaaacca gcgtgttatt ggtggcaatt
    25921 ttagtagcga ttgtcattgt ggctttatta cctcaatctt cttcaatcaa actagagaaa
    25981 ggagtagaaa atgagcacaa atgatacttt gataatgttt gcagcattag tgctcggctc
    26041 gcaaatttgt cgttttttgc cggaattttt accgaaaaag gtgttatctt cgcccatttt
    26101 gcaaaaatta aacaaaatgt taccgcttgt gattatgctt ttattgcttt taacgagcct
    26161 aaactttcct aaaaacgggg aaggctttaa cttaatattg gcacaaattc tggctttaat
    26221 aggcgtatta ggtagctatg tttggcttaa aaataccttt ttaagcgtag cgttggggat
    26281 tttcggtgtg aatgtatttt tatccctgtt aggataaata ccaaaggtca ttttatagga
    26341 gcgaaacacc ttcgctcaat cattaacaga tgtggggcga aaaatttttc gccccttatt
    26401 tatcacaagc ggtctttttc tttcaatttt ttgcaaatta aatcgctaaa tcaaacgcat
    26461 agaaggcaac taaaataatc gcaataatta ctgtacctag gtttaattta ttggcttcgc
    26521 ctgaaattaa gcgaccaatc acaagggtgg cgaaacctag cataatgcct gtcacaatgt
    26581 tggcggttaa tacgatgaac accgcacaga ctaaacctga cattgcacct acaaaatcgc
    26641 tgaaatctaa tttagagaca ttacttagca ttaataagcc cacatacatt aatgccggtg
    26701 cggtggcata gcttggtact aagaatgcaa gaggttggaa gaacagcata aataagaaac
    26761 cgataccaac cactacagcg gttaaacctg ttttaccgcc aacggctgta cctgctgccg
    26821 attcaatata cactgccgct ggtgctgtac caaataagcc cgataaaatt gatccgaatg
    26881 agtcagaagt tagggcttta tcgccattga taatttgtcc gtctttatct aataaaccgg
    26941 cttgccctgc aaccgcacgg atagtacctg ttgcatcaaa aatagcggtc attactaacg
    27001 caaacactac cggtaaaatg gcggtattta atgctcccat aatatcaaga tttaggaatt
    27061 gcgaattttc accaaaactc ggcattttga aaaagcctgt gtattttacg ttagggtcaa
    27121 aaattaaacc tacgatggta atagcaataa tgacccataa aatactgcct tttactttca
    27181 gcttttctaa cccgataatg gcggctagac cgattaatga cactaaaacc ggaaatgaag
    27241 tgaagtcccc taatttaacc ggaatatcca taccgctatt gaccactaat ttaacgttag
    27301 tggcggcaat aatcagtaag aataaaccaa taccaattcc agcaccgtgg gcaatgctgc
    27361 ttggcaaatt acgtaaaatc caagtacgaa taccggtagc agaaatcaag gtaaatacta
    27421 cgcccattaa gaaaatcgcc ccgagtgcaa caggaataga aacttgttgc cctaatacta
    27481 agctaaaggc agtaaaagca gtaagtgaaa tcgcacaacc gattgccatt ggggcatttg
    27541 cccataaacc gattaagata gagccgagac ctgaaactaa acaggtggca ataaataccg
    27601 attcggcagg aaagcctgct tggcttagca ttcccggcac aacgatgacg gaataaacca
    27661 tggctaaaaa ggtagttaaa ccggcgatga tttcttgacg agcgtttgaa ccacgctcct
    27721 caaatttaaa taacgacata agaacctcaa aagaagaaaa tgaaagggga aattttagga
    27781 tgcggaattt tacagaaatt taaaataatt agcaaacgtt tgcgtaaaaa gtgaaagaaa
    27841 agcaggaata aatcctgctt ttgtttgatg gttagtaatc gatgaaagcg tcttgatctg
    27901 ccccttcctt ttcaacttta ggctgaacca tatgttcacg ttttagccca agttgtagtg
    27961 ccacaccaat tgcaatgtag atggatgaat aagtaccgaa accgataccg atcaataatg
    28021 caagtgagaa actatgaagc gttggaccac ctagatagaa taaggctagt accacaaaga
    28081 gggtggttac tgatgtcatt aaagtacgcg aaagtgtttg gctcaaggaa atatcgataa
    28141 tttcaattga gctggagcga cgaactttag aaaagttttc acgtacacgg tcaaacacca
    28201 caattgagtc atttaacgag taaccgacaa cagataaaat cgctgctaca aaggtcaagt
    28261 caatttcaat ctgtaagaaa gagaagattc cgatcgtcac taatacatcg tgaaataaag
    28321 ccacaatacc gcctaccgct aaacgccact caaaacgtgt tcccacgtaa ataagtagca
    28381 tagcaagtgt tgccaaagtg gcataaatag ccccttgggt tagctcttcc cccacgtttg
    28441 ggccaacgaa ttcaatgctc ttgatagtcg cattcggatc taatttttga tggatcatct
    28501 ccatcacttt attcccaaca gacatatcac cggcactggc ggcaagtcgg atcattaaat
    28561 ctttttgact gcctgtggtt tgcactaagg cattgccgta gccgctattt tcaagctccg
    28621 tacgcagttt tgctaaatca gcaggttgtg aaaattgagt ttcgattact gtcccgccgg
    28681 taaaatctaa cccccagtta aagccttttg tcgcaatagt aaaaatgcat aaagcagtta
    28741 caatcagcga aaaaatgaat ccgacatagc ggtatttcat aaaggggatt aatttataag
    28801 gcagtttaat ttctgctaca tcttgttgta cattttcaat agccattttt ccaccttaaa
    28861 tccaaagttt cttcacgcgt ttgccaccgt aaacccagtt tacaagcatt cgagtacctg
    28921 taattgcggt aaacatagaa ataattaccc ctaatgcaag cgttaccgca aagcctttta
    28981 ccggacctgt acctacacca taaagcacaa gagaagtcaa aatagtggtg aggttggagt
    29041 caaaaatact tgagaatgcg ccattataac cttcgtggat tgcttgttga attgggcgac
    29101 cgttacgaat ctcttctttg atccgctcgt agattagtac gttggcatca actgacatac
    29161 ccacagcaag tacgataccg gcaattcccg gcatagtaag ggttgcaccg attaatgaca
    29221 ttaaaccaat cgttaagatc atattcacaa tcaaggcaag agaggcaaat ataccaaata
    29281 ctttataaaa ggctagacag aacaggatcg ttaagcctaa gcctaaaata ctagcttcca
    29341 taccttgttt aacattatct gccccaagag aagcaccgat agtacgctct tccacaatca
    29401 cgattggagc aatcaacgca cctgaacgta ataataccgc aaggttttga gcttccgctg
    29461 gtgaattaat ccctgtaatc tggaattgat tacctaaacg ggtttgaatg gttgcaacgt
    29521 taattacctc ttggtgtttt tctaaaatga ctttaccgtt agcatcttta cgacctgaat
    29581 ctttaaattc ggtataaagt gttgccatcg gtttttggat tgccatttta gtaatttcac
    29641 ccatcatctc gccgccttcg gtatcgagtc ggatactcac ttgcggcaag ccacgctcat
    29701 cagtgcctga ggttgcatca ataatatgtt caccccctaa cgaaggttta cggcgtaata
    29761 caactggctc gccatcacgg gtgttttgca gtcctgaatc agccggcaca atgcctttcg
    29821 ccgcagaggc cacattggct tcggtattga ctaaccggaa ctcaagggtt gcagttgccc
    29881 ctaaaagctc tttggcacga gcggtatctt gcacacccgg taattcaact acgatacgat
    29941 ctgcaccttg acgctgaatg gtcggctcag aaacgcccaa ttcctcaaca cgtttacgca
    30001 aaatagaaag gttttgttcg attgccatcg tgcgagattc agaaagagct tgtgctgatg
    30061 gcgttaaggt gactttatta tcatttacca aaatatcaag cgttgggtga gagagacgca
    30121 ctaaacgcac tgctttttcg gcggtatcgt tatcggcaaa ttcaacctca gttgcaaaat
    30181 tttcgccttt tttgaccgct tgatattgca atttttcttt acggaaatca ctacgcaggc
    30241 tgtcttgcaa agtgtcttgt tgttttgcaa gcgccgtgtt catatccact tccattaaga
    30301 aacgaacacc gccaagcaag tccaagcctc gcttcatcgg gctaccgcca atgtcagaca
    30361 accactgtgg cgttgctggt gcaaggttta aggcaacaga gtagttattc cccaatgctt
    30421 ctgagatttt ttctttggca ggcaattgct gttcgctgct ttcgagacga accaaaatcg
    30481 agccattttc taacacggca gatttcggct gaatattcat tgctgaaagt gtggattgca
    30541 cttgagacag tgtctcaggt gtggcttgtt gcccacgagt accggaaatt tgtaccgaag
    30601 gatcatcgcc atataaattt ggaagggcat ataaagcacc aatggcgatc acgaagatca
    30661 ccattaaatt cttccataga gggaaacggt ttaacacaat aactccccga atgttaaagt
    30721 tggataagag ggttgattaa agtgatttta atgaaccttt tggtaacacc gcaacaacga
    30781 aatcacgttt gatggtcact tcagttgtgt catttaatgc aatcacgatg ttatcgttat
    30841 cagcggtcac tttggtaatt ttaccgatta aaccaccgct ggttaatact tcatcgcctt
    30901 ttgtcaagct tgccagtaaa tcacgttgtt gtttttggcg ttttgcctga ggacgataaa
    30961 tcataaaata gaaaattgca ccgaaaataa tcaggataaa gatcatttcc attccgccac
    31021 cttgttgcat aaaaactcct taaatgtttg agtggtataa aaataagtgt tataaaaaac
    31081 gcctgttaaa ataccataaa ttcaatgaat taacgagtag aaaaattcat cgaatgcttt
    31141 tcttttaaac aaaaatttga gtagaatcag cacttttagt ttaggattag gttcttggcg
    31201 tgttcttgcg ctgacacaat aggagaaaaa atgaaaaaat tattcgctca agcggttatt
    31261 tttggggctt tttttgcaag ttccgctttt gctcacaatg tgcaattaaa tcaagcatta
    31321 cctgctgttt cggttgcaaa agacggggaa ttggcagtgg caggtggaaa ggttagctat
    31381 aaaaattggc attcatcatc tctggcaggt aaagtccgtg ttattcatca ttttgccggt
    31441 agaagttcgg tgaaagaaaa aaatgaagat ttgatgacag caattaaaaa tgccggtttt
    31501 gatcgctcga aataccaaac ggtgacgatt gtaaatgctg atgatgcgat tgtcggcaca
    31561 ggggtatttg tgaaaaatag tgtggaaaac ggcaaacttg acaatcctca cagccaagta
    31621 gtgttagacc agcaaggcag tgtgaaaaaa gcgtggggct taaaagagaa agagagcttt
    31681 attgcagtgc tggataaatc gggtaaggta caatttacct ctgagggcaa actctctgca
    31741 aaacagattc aagaagtgat tgggttggtg aaaacattaa cgcaataacc agtgttttta
    31801 tgggcggatt ttgtatccgc ccatcattct agataataaa tcgataactt atcgtgtgat
    31861 gatactcttc tcctgctttt gttatcccgc caaattggag taattcaggc tggtttagtg
    31921 aatttgggaa aaactcaggc tctaatgcta caccagcgta atcttcatat tcgcctttag
    31981 tcaaattagg ttgtcctttt agccagttgc cggtgtaaag ttgtaatgct ggcatggagg
    32041 tgcggagttc catttttaag tcttccacgg ctaaacaagc ggtcggattt tcactatttt
    32101 ttgcaagatg aaaggagtga tcgtaacctt ttaccgcttt ttggtcgtca tcagccaata
    32161 aatcttgccc aattttttta gcattgcgga agtcaaaact ggtactctcc acttttttca
    32221 gtggagcatt aggaataccg ctggcatcaa ccggtaagta tccgtctgca ttaattatca
    32281 gctcgtgatc taaaatcgtc tctgaacctt gcaaattaaa ataggcgtga ttagttaagc
    32341 aaagcggtgt atcttggtta gcaacggcat caaagctgat ttgaagctca ttctctgtta
    32401 agcgatactc cacaaaagct ttcacttcgc cgccaaatcc ttcctcgcca tctgcaaaaa
    32461 aataactaaa tttgaccgct tgttcgcttt ggctttcaag ttgccacact attttatctg
    32521 ccccaagctc gccaccgtgg agattatgtt caccgttatt tttagcgagc tggtaggttt
    32581 tgccgtttaa gcgatattcg gcattggcaa tgcggttagc gtaacgccca atggtcgctc
    32641 caaagaaagc ggtctgtttt tgccaatttt ttgcagacgt ggtgactaat acttcccgtt
    32701 cctcgttcgg cattttgaca atgcacgaaa gccaagaagc cccaacatca gaaagggtaa
    32761 tgcgtaaaaa cgcattttca agggtgaata atttcatcgg ttgaccttaa ttacctagca
    32821 cggcatagcc gtactaggtt aagcataatt cagccctgct agggctgagg ttatttattt
    32881 tagagtagcg gagctacttc cttatgctta acccggtacg ctttagcgtg ccgggcattc
    32941 tcgcacccca tcggaggcag tacaaacgtg gaaggtttct ttaatgccgg tttgcttttc
    33001 gtaattgtta gcaacggctt ggcggagatc ttccactttg tcatttggca ctaggcacac
    33061 gacacaaccg ccaaagccgc cgccagtcat tctggctccg ccgtttttac cgatagcttg
    33121 ttgggcgatt tcggctaagc aatccacttc agggcaggtg atttcaaaat catcacgcat
    33181 tgagtcgtga gattgagcca tcaactcccc gagtttgacc atatcattcg cttttaaggc
    33241 ctctactgct tccagaactc gttgattttc gctgatgata tgttttgctc gtttatacgc
    33301 cagctcattc tcttcactaa gttctgaggc tcgttcaata aattgttccg ctgtgacatc
    33361 acgcaatttt gctttgccga agaagtgggc ggcaaattcg cactgttcac ggcgactgtt
    33421 gtattcgccg gtaaccaagt cgtgttttac gttggagtta ataatcgcaa tcgaatagcc
    33481 ttgtggcaca ggggttgggg tgatttctaa actacggcag tcgatcatca ctaaatgatc
    33541 ttgttgcccg agagcggagg tgagctgatc catattgccg cagttgcagc cgacaaattt
    33601 attctcagcc tcttgcccga ttaatgcgat ttgcggtaaa gaaagcggta aatcgccgag
    33661 taattgagcg gttttaccaa tcgacacttc caatgcggcg gaagaactta aacctgatga
    33721 catcggcaca tcgctggtaa tggctaaatc tgctccttgt ttgaattcgg ggtgtttggc
    33781 ttgaataaat ttcaccacgc cacgcacata attcgcccat ttttgctcgc ttggctcaat
    33841 cgcctggctt aaatcaaatt catcttgttg gttgagatca atggcgaaca cccgccattt
    33901 gttgtcacta cgtttggcaa agctaaccgc tgtgccgtaa ttgatggcac aaggcattac
    33961 aaacccatcg ttgtaatcag tatgttcgcc gataatattc actctgcccg gggcaaatac
    34021 cgtgcgttct gctttataac caaaatgttg ttcaaattgt tgcaaagcga tttcttgtgg
    34081 tttcatttca attccttatt tatctttata gtgtttggta tcacttactg catttaaacg
    34141 ttcggcagct tgttccgggg ttaaatcacg ttggctttct gccatcattt cataaccgac
    34201 cataaattta cgcactgttg ccgaacgcaa gagcggcgga tagaagtgag cgtgtaattg
    34261 ccagtgagca ttttccttgc cgttaaacgg agcgaagtga aagcccattg aataaggaaa
    34321 gctgatgtta aacagattgt cgtaacgggt ggtgagcttt ttcaatgcaa gggctaaatc
    34381 cgctttttcc gcttcgttta aatcggtaat ggatttgaac tgcttggctt tcggcaacag
    34441 caaggtttca aacggccaag ccgcccagta aggcacaacc gcaatccaat cttcggtttc
    34501 tgccacaatt cgctcttgtt tgtctaattc acgttgtgcg tagtcaagca acagtggcga
    34561 gccatattga gcaaaatatt tcgcttggca ttcgtcttca atcgcaattt cattaggtag
    34621 aaaattactt gcccaaattt gcccgtgtgg gtgagggtta gaacacccca tcattgagcc
    34681 tttgttctca aaaatttgca cccactgata atgctctttc agctcattcg cttgctcttg
    34741 ccaaactgtt accacatcag taatttcctc gatggaaagt tgcggtaagg ttttactatg
    34801 atcaggcgaa aaacagatca cacggctttc gccttgtgta tgagaaatct gaaacagcgg
    34861 atcatcattc ggtattggtg ccggtgtgtc tggtagcagg gcagagaagt cgtttttaaa
    34921 cacaaacggc ttggtgtaat tcgggttttg ttcgccggta atccgcttat tgccggggca
    34981 gaggtaacaa cttgggtcgt agctcggttt ttcatcttgc acgatttctt cttgttgccc
    35041 ttgccacggg cgttttgccc gatgcggaga gactaaaatc cattgatttt ttaatggatt
    35101 aaaacgacga tgtgggtgat cgttgaggac aaattcgctc atataaaact cctcgaaatt
    35161 agttatgtaa agagtatagc gaaagtcaga caaaatgact gtgacatagc tcacaaaata
    35221 atgatgtcaa gcggtcaaat ttcagaaaaa ttttgcaagt tttcctccat tttgcgattt
    35281 aaggtagctt acgtggaatt gaatgtggct tttggtagaa tagatgaata tgcaagatat
    35341 taagacaaaa atagatggaa agactgaata aatttgatgc ttggttaatg aatcataaac
    35401 ctaatgctag gttaagcgga gcgagtcgtt tgttgacaga gttttggttc tttgggttaa
    35461 aagaagctag agcctgttta tttgcgggat tattttttat tgcgatgttt tcggtaccaa
    35521 aaacgggatt atggggctta cctcgttatg atattttgct gatttttgcc atagtggtgc
    35581 aaattgcaat ggtgaaactg gggctggaaa cgtgggacga gctaaaagca ataagcctat
    35641 ttcatttggt tggttttgtg ttagaagtct ttaaaacatc gagtaatatt caatcttggg
    35701 catatccgga ttttgcctat actaaattgt tcaatgtgcc attatttact ggttttatgt
    35761 atgcagcagt tggttcttac attatccaag cgtggcggtt gtttgatttg aaaattaaaa
    35821 gccacctgcc ctattggtta gccactttaa cggcactgat gatttacctg aatttcttta
    35881 cgcatcatta cattggggat taccgttggt atattgccgc ttttgcatta gggctgtatg
    35941 cacgtacttt tgtatttttc accccttatg acattacacg aaaaatgcca ctgctgcttt
    36001 ctttcttcct gataggtttt ttcatttggt tggcggaaaa tatcggtacg tttgccggaa
    36061 tttggcgcta cccgaatcag tttggggctt ggtctatggt gcatatgagc aagtggagtg
    36121 cttgggcgtt attggtgatg atgactttta ccatcattgt gcatttaaag catatcaagc
    36181 aaacagtcag agtctcgagc gattaacaag ctgtgggttt tggcgaaaat tttactcatc
    36241 agttattttc agtggaatta ggggcaaata ataatttgcc cctatatcaa attatggatt
    36301 ttccccttcc acatcaataa tcatcacttc cgactgtgag cctaaccgca tcggcacgcc
    36361 ccagaatccg tagccggagg tgacaaaata atgcccgaag ccgatttttt catagccgta
    36421 atgtaatcga tagatcagtt tggtaataat acttgcaggg aacacttgcc ctttgtgagc
    36481 gtgtcctgaa acttgaatat caatcggcaa tttagcatgt tgctcaattt cagtcgggcg
    36541 gtggtcaagc aaaattaccg gtagtttagt gttcacgttt tgtaaaagct gttcggcaga
    36601 aggtcgattt ttgactaaat catcattacg cccaataagg gtaaattttc cgttaatttc
    36661 ggccgtttga tcccataaaa cagtaatacc ggcgtcggta atttcttttg caatcgtttc
    36721 ttgagcccca aaaaagtcgt gattgccaag ggtagcatac acgccaagag gagcttttaa
    36781 tttggctaaa tgaggctgca ttttatcggc aacataaact tcggtattgt cgtccataat
    36841 atcgcccggc aataaaatca gatcgacttt ttgctggttg aaaatctctg ccagttggtc
    36901 aagttgcttg gttccgaaca gttttcctaa atgcagatcg cttgccatac caatgcgaag
    36961 cggtttctct aatggtttat ccaatttcac cgaataatgt actactgttg gggtataagc
    37021 gttgtaatag ccaagcccaa gtaagccaaa gaatgcaaat gggtaggcga ttttcagcca
    37081 gcgattgacg gtagtattgc cgttgaatat tttgtaaata caagcggtga aaaaactgat
    37141 aaaaaatgca aaaagtaaca ataccaatat gaatgccatt attctaaata gcgcaaaagt
    37201 acgagtaaga tgcaaaatca ctaatccgtt tgcgactaag aaagtgagaa taccaactgt
    37261 tttacggttt ttacttgata aattaaataa ccagctgaca gtctttgcaa agttgaataa
    37321 aaagagttgt aacaccgcaa tcacaagggc ggtggtaatg tagtaacgat attccatatt
    37381 tttccttcaa taaattggct aaacccagcc gatttgtctt aataaaaata agccgatgct
    37441 ggcactaaac attgagccga gagtcgtaat gccgatcaga tttgcggctg cctcgccgtc
    37501 tccgccatag ttgcgtgtca ttgcgtaggt ggctgaagca acgggagcag aagcagccac
    37561 aaagacaatg cctagttcca tcggcggaag ttgaaacaca aatttcccga gtagtagcaa
    37621 gaaaattgga gcaaaaatca gccgaatcga ggcagaaaac agcacaattt tattgatggt
    37681 gctttccact ccttgattaa attgtttcaa ctgtttgaaa ttaatgcttg ctccggtgca
    37741 gataagtgct aatggtagtg tcaggctcgc cattaattta ccagcagact caagcggggt
    37801 tggaatttgg tggcttaatt caaaatagtt aaaagttaag cctgcaatga cggctagaat
    37861 cagcggattt ctcaatatcg acaatattaa tctgccaaaa ttcacttttt tctcgcttaa
    37921 cgatgaagtg agggtaatca ctgcaagcac attaaaggta atcaccaagc acgaaatata
    37981 aactgaagcg gcagcgagag ctttatcgcc ataagcattg agaattaagg caatgcctaa
    38041 aatcgccgca ttggtacgga aagtgccttg agtgaaaata caacgataac ggcggttttc
    38101 aatatgtcga gccgcccacc attccgccca taaatagatc aaaatcgaac cgccgactcc
    38161 ggtcgagatc aggttgattt ggctggagaa atctaacggg ctttttagca tattcaagaa
    38221 aatcatcggt ggcagggtaa aattaaatac cacctttgat gccatattgc aaaaggtatc
    38281 gtcaataaat tttcgtctgc gtggaaaaat accgaacagc attaacaaaa tggttggtaa
    38341 ggtaacgcca atgctaaatt ggatagagtc gaaaagcata atgtttgcct taaatgatgg
    38401 cacgagtgtc ttttgcttgt accgtagatt atcaataaag taccagcgtg gacgctggta
    38461 ctatcatcaa tggaaatgaa attacaatcc tgcctttaag cttgcttcga caaatttatc
    38521 caaatcaccg tccagcactt gttgggtggt gcgatgttcc acaccggtac ggtggtcttt
    38581 aatccgtgaa tcgtctagca cataagagcg gatctggctg ccccagccga tgtcggattt
    38641 gttgtcttcc atcgcctgtt tttccgcatt tttcttgctc atttccagct catatagctt
    38701 cgctttaagc tgtttcatcg cctgatcttt attttgatgt tgtgaacgac cgttctggca
    38761 ctgcaccaca atgccgctcg gtatatgggt aattcgcacc gccgattcgg ttttattgac
    38821 gtgctgacca cccgcccctg aggcacgata cacatcaatc cgcaaatccg cagggttgat
    38881 ttcaatatca atatcgtcat cgacttccgg ataaacgaaa gccgccgaga acgaggtatg
    38941 acgaccgtta ttggcatcaa acgggctttt acgcaccaag cggtgaatac ccgtttcggt
    39001 tctgaaccag ccgtaagcat agtcgccgga aattttcacg gtggcggatt taatccctgc
    39061 cacatcaccg tctgaggctt ccattagttc ggctttaaac cctttgctct ctgcccaacg
    39121 caaatacata cgcagtaaca tttctgtcca gtcctgagct tccgttccac ccgaaccggc
    39181 ttgcaaatcc aaatagcaat cggcactgtc gtgtgggccg ctgaacatcc gcttaaattc
    39241 taaatcggca agttttttct ctaattcgtc tgcttccact tgggcttcat tgaaggtatc
    39301 ctgatcttct gcttccaccg ccagctcaat caacccttca acatcttcaa tcccttgctc
    39361 taaggcttta atcgtattga cgatctgctc caacattgcc cgctctttac caagcgcttg
    39421 tgctttttcc ggcttgttcc atacatcggg ttgttccagc tcggcattga cctcttctaa
    39481 gcgttcgact ttatgctcaa agtcaaagat accccctgat caccgcggtg cgctcgctta
    39541 aatcagttag ttggttttta attgggttta attcaaacat tgtcgttcct gtttttgctt
    39601 attttaaaaa gatgaattat agctgaagtt aagcaagcgg tcgaattttg caagaaatgg
    39661 agcaatgatc gtttctagta atgagatttg gttcataaaa gttgcaactg tttctgctat
    39721 ttggctttga tagctaaaaa tctttaaaaa aacaagcggt cgttttaccc cattttttgc
    39781 aaaacgaccg tagcttcttg ctataatcgc tgaaaaaatg ctgcaaggag attttatggc
    39841 aaagcgccca agtgatattg atgcaaccct attgcaactg gaaatcctac gccgtatccc
    39901 caaattaccc gctaaaattg atgctaaaag tttgcaccaa cagctattag atgccggctt
    39961 tgaacgggat attcgcactg ttcagcgttc gctcaaaatg ttatgcgagc attttgatat
    40021 tgaatgcgat gagcggagca aaccctttgg ttatagctgg aaaatccgct cagaggggct
    40081 ggcattgccg attctcaacg aacaacaatc attactgcta aaacttgccg agcaacagct
    40141 gaaatatctg ttacccgcaa atttaatggc atcaatgaaa cccttttttg agcaggcaga
    40201 cagaatggtt tccggggcga aagacaagcc cgaataccaa tggctaaata aagtttgctc
    40261 cacgccaacc agcctaccgc tgatccctgc aaaaattaaa gaagagattt ttaattccgt
    40321 aagccaagcc ttatttcaaa ataagttgtt aaagatcgaa tatcagaacc agcacggcaa
    40381 aaaacaccaa gcgacaatta tgccgttggc gatttcacaa caaggtgcga gcatttattt
    40441 ggtctgccgt tacgaagggt ttgacgacaa ccgcctgttg gctcttcacc gcattcgtaa
    40501 agcggagatt tctactttta gttttgaacg cccgaaagat tttaatttgc aagcctacca
    40561 agatgccgga cacctcggtt ttggcaatgg cgaaaaagct agccttacct tttcgattag
    40621 cagagacgcc ggtttccatt taaccgaaac accgcttgcc aaagatcaaa aaattctcga
    40681 ggagagtgaa actcactacc gtattcaagc catagtcgct gataatgata tgctaacctg
    40741 gtagctacgc aaatttggcg aagatatttg ggatatcgag aaagaagcgc taaaataagc
    40801 taaacaagcg gtcggttttg tgggaatttt tgctaaatag tatcgaccgc tcctccctaa
    40861 acagaccttt atcataaata caactctttc aatcagatat tcttactgtc tattgatgaa
    40921 cgattcgaat ttttctagtg gttgaaattt aaactaattt tcttgctttt tggcattttt
    40981 cagactttta attctctcca ttagcctgtt tttttacgct ctttttcata aacaggaata
    41041 accaatgcct tttcaactta ctttctgcca acaagccggc aatcagcacc agaaaaatca
    41101 agatgcactg tttaacggca aagcggtgta ccaatggcaa cttaaaaatg ccgagagtta
    41161 tctgctggat aacgacaaag taatttttgg ggttgcggac ggcgtttcca gccaccctcg
    41221 aaatcatctt gcctcacatt atttaatggc gttactcagc caatgccaat cccttgatag
    41281 ccaatggttg cgacaggctc acggcgattt ttgcgaaaaa ttagcgaaag attattttgg
    41341 tgcttcttgc acttttgttg cttgtgaatt acaccataac ggcagagggc gtatggttaa
    41401 tgtgggcgac agtcgagcct ataaaattac ggcaaacggg gagtggcaac aactgagttt
    41461 tgatcacacc atactggctg aaatgaaaca gaaaggcttg gttaaggaag ggagcaacta
    41521 tgcctcaatg tataacggct taaccgattg tattgttgcc gattttgacg ccgatgattt
    41581 ccgcattcat atagccgaat ttcaactgga aaaaggcgag agcattttgc tctgttctga
    41641 cggtttgcac gaacaactcg ccccagaagc tattcaggcg atttaggacg gatacgaaag
    41701 cccgtctcat cgtctgcaaa tttgcagaaa aatggtaaaa atgcaccgct tgtatgacga
    41761 tttttctgcg gtgatttgtg aaattgtgta attaaaacga cattatttgt cgcattggtg
    41821 cttaaaatcc gcataaaaca gaggagaaaa aaatgaaaaa cgatttccat tatgccgctg
    41881 aattaatccg caatgcagac ggcattttaa ttaccgcagg ggctggaatg tcggtggaca
    41941 gtggcttgcc cgatttccgt agcgtgggag ggttatggaa ttcctaccca ccgctcaaaa
    42001 aatttaattt gcaatttatg cagattgcca caccgcttgc ctatcaggaa cgccctga
//
LOCUS       DANLXD010000007        39100 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.007, whole genome shotgun sequence.
ACCESSION   DANLXD010000007 DANLXD010000000
VERSION     DANLXD010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 39100)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39100)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39100
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.007"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..809
                     /locus_tag="PXD18_000293"
     CDS             <1..809
                     /locus_tag="PXD18_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HDL6300762.1"
                     /translation="KLFEQKSVRSHYDEEKDKWYFSIIDVIAILTESLDPSAYWRKLK
                     QRLKAEGNETVTNCHGLKMPSADGKMRLTDVADTEQLFRLIQSIPSPKAEPFKQWLAK
                     VGYERLQEINDPSQSLDRARENWQKMGRSEKWIQQRMMGQETRNKLTDYWKSSGVEQP
                     QDFAFLTNVIHQEWSGLSVQKHKSLKGLKSQNLRDHMSEAELLFTALAELSSRQIAES
                     MQAVGVDENAQAGKQGGNIAKNARQELENKTGKSVVTGENFLPPAKNEEE"
     gene            complement(903..1382)
                     /gene="trmL"
                     /locus_tag="PXD18_000294"
     CDS             complement(903..1382)
                     /gene="trmL"
                     /locus_tag="PXD18_000294"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HDL6300763.1"
                     /translation="MLDIVLYEPEIPQNSGNIIRLCANCGFRLHMIEPFGFGWDDKKL
                     RRSGLDYHEFVDIQKYKNFEDFLERAKPKRLFALTTRGEQNHSDVKYELGDFLMFGPE
                     SRGIPKPLLAEMPMSQKIRIPMCKDSRSMNLSNSVAVVVYEAWRQFGYQNAVAAQSI"
     gene            complement(1559..3718)
                     /gene="rlmKL"
                     /locus_tag="PXD18_000295"
     CDS             complement(1559..3718)
                     /gene="rlmKL"
                     /locus_tag="PXD18_000295"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HDL6300764.1"
                     /translation="MTNQTTYFATAARGFEEILKTELEQICAAECKVAQGGVHFTTTQ
                     KGAYQALLHSRLASRILLPLISTKIFSDSDLYASIVSFNWADLFDPRDTFYIDFSGTN
                     REIRNTQFGAMRVKDGIVDYFERKGFARPTVDKDNPDVRIHVYLDRENVVVSLDLSGD
                     ALHIRGYREETGKAPLRETLAAAIILRSGWKVGTPLVDPMCGSGTLLIEAAQMAANIA
                     PQLHRKHWGFNAWKGHQQAMWKAVLDEAFRNVELGAVGENCNSSLQKMFFGFDLDHRV
                     LTKAKQNAKNAGVDHLIQWQQGDVAALKNPIPEKIGTVVCNPPYGERLGTTPALIALY
                     SVFGQRLKQQFAGWNASIFSGEPELLNCLRLRSARQFKAKNGPLDCVQKNYSISEHNK
                     RSDLDENLQFEQNAQVAPDFANRLTKNIKKIEKWAKQQGIDAYRLYDADLPEYNLAVD
                     RYGDHIVVQEYQAPKNIDEQKARQRLLDAVSATLYVTGVETNKLVLKVRQKQKGTNQY
                     EKLANKGEYFYVNEYGAKLWVNLTDYLDTGLFLDHRLTRKMVGEMAKGKTFLNLFAYT
                     GSATVHAALNGAKSTTTVDMSNTYLNWAEQNLELNNLSLRHHRLFQADCLQWLAECRE
                     RFELIFVDPPTFSNSKRMENSWDVQRDHIELMKQLKRILTADGTIVFSNNKRGFKMDF
                     DGLAALGLTAENISHKTLPLDFERNPQIHNCWIVKNV"
     gene            3916..4545
                     /locus_tag="PXD18_000296"
     CDS             3916..4545
                     /locus_tag="PXD18_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDL6300765.1"
                     /translation="MTAPTQILLIDDHPLMRQGMRQLLELDHQFSVVGEASNGTDGIK
                     LALRLEPDVIILDLNMKGLSGLDTLRSLRAQGIDARIIVLTVSDEQSDVFALMDAGVD
                     GYLLKDTDTPELLDNIRKAAAGEVVLSETVRQHLLNRQPENDPLSCLTDRELDVLQWL
                     ATGMSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRVAATVLYLEQQKG"
     gene            complement(4581..5591)
                     /locus_tag="PXD18_000297"
     CDS             complement(4581..5591)
                     /locus_tag="PXD18_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDL6300766.1"
                     /translation="MATMKDIARLAQVSTSTVSHVINNSRFVSEEIRERVQRVVKELN
                     YTPSALARSLKVNETKTIGMLVTATGNPFFAEVMAGVEQYCQQHQYNLIIATTNGDTE
                     RLQHHLQMLMQRKVDGLLLMCGDTRLNADESLNIPLPLVVLDWWFTELNADKIFENSI
                     SGGYLATKTLIEAGHSKIAIITGNLKKSLAKNRLEGYKKALAEANIPLNPNWVFESHF
                     DFAGGVNGMNALLAQSEKPTAVFACSDTIALGAYQAIWQQGLRIPQDISIIGYDDIEL
                     AKYLSPPLSTISQPKAELGRLAVETLLKRIRFKSTDFQTIMLEPELVLRHSIQTINKN
                     AE"
     gene            complement(5605..6534)
                     /gene="rbsK"
                     /locus_tag="PXD18_000298"
     CDS             complement(5605..6534)
                     /gene="rbsK"
                     /locus_tag="PXD18_000298"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HDL6300767.1"
                     /translation="MKKLTVLGSINADHVISVPYFAKPGETLTGHSCHIAYGGKGANQ
                     AVAAARLGAKVSFIGCIGSDDIGKAMKSAFEQDGIDTRSIKTIPNEMTGIAMIQVAES
                     GENSIVISAGANGHLDETVVAKCAAEITQADYLLMQLETPLPAIVQAAKLAQQNGTKV
                     ILNPAPARALPDELLNLLDMITPNETEAEILTGVKVVDEASAIQAAQVFHQKGIEKVL
                     ITLGSKGVFVSENGVGKIVAGFRVQAVDTTAAGDTFNGALVTAMLEDKPLDQAIRFAH
                     AAAAISVTRKGAQPSIPTRQETLDFLSQQAVSF"
     gene            complement(6655..7533)
                     /gene="rbsB"
                     /locus_tag="PXD18_000299"
     CDS             complement(6655..7533)
                     /gene="rbsB"
                     /locus_tag="PXD18_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006995182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter substrate-binding protein
                     RbsB"
                     /protein_id="HDL6300768.1"
                     /translation="MKKLTTIASAVMLSLSVAATASAKETIALAVSTLDNPFFVSLKD
                     GAQKKADELGYKLVVLDSQNDPAKELSNVEDLTVRGAKVLLINPTDSEAVGNAVAIAN
                     RNKIPVITLDRGAAKGEVVSHIASDNVAGGKMAGDFIAQKLGSGAKVIQLEGIAGTSA
                     ARERGEGFKQAIEAHKFNVLASQPADFDRTKGLNVTENLLSSKGDVQAIFAQNDEMAL
                     GALRAVSSAKKEVVIVGFDGTDDGVKAVESGKLAATIAQQPELIGSLGVETADKVLKG
                     EKVEAKIPVDLKVISK"
     gene            complement(7556..8524)
                     /gene="rbsC"
                     /locus_tag="PXD18_000300"
     CDS             complement(7556..8524)
                     /gene="rbsC"
                     /locus_tag="PXD18_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005753457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter permease"
                     /protein_id="HDL6300769.1"
                     /translation="MATQTKQFQLGRFLIEQRSFVALFILIVSVSMINPDFFSVDNIL
                     NILRQTSVNAIIAVGMTFVILIAGIDLSVGSVLALTGAVAATLVGSELPILLVIPLVL
                     LLGTAFGGISGAIVAKGKVQAFIATLVTMTLLRGITMVYTDGRPISTGFSDQADAFAF
                     IGTGYLFGIPVPIWIMAVVFGLAWYILKHTPIGRYIYALGGNESATQLSGINVNKIKI
                     FVFAVSGFLSALAGLIVTSRLSSAQPTAGVSYELDAIAAVVVGGTSLMGGKGRVMGTL
                     VGALIIGFLNNALNLLDISSYYQMIAKALVILAAVLADNYLGTKKV"
     gene            complement(8534..10030)
                     /gene="rbsA"
                     /locus_tag="PXD18_000301"
     CDS             complement(8534..10030)
                     /gene="rbsA"
                     /locus_tag="PXD18_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter ATP-binding protein RbsA"
                     /protein_id="HDL6300770.1"
                     /translation="METLLKMSGIDKEFPGVKALSNACLSVYGGRVMALMGENGAGKS
                     TLMKVLTGIYSKDAGSISYLGKEVTFKGPKDSQEAGISIIHQELNLVGNLTIAENIFL
                     GRESKTAWGAIDWKKMYAEADKLLARLGVKHSSHQLCAELSIGEQQMVEIAKALSFES
                     QVIIMDEPTDALTDTETASLFKVIRELKAENRGIVYISHRLKEIFEICDDVTVLRDGQ
                     FIGERVIADIDEDQLIEMMVGRRLEEQYPHLHQERGELLLEVKNLSGSGVNNVSFQLH
                     KGEIVGISGLMGAGRTELMKVLYGALPKTAGSIELNGKAISNHCPQDGLNNGIVYISE
                     DRKGDGLILGMSVKENMSLTSLDHFSKAGSIRHDAEKLAVDDFIEMFNIKTPSREQQI
                     GLLSGGNQQKVAIAKGLMTRPNVLILDEPTRGVDVGAKKEIYQLINEFKKDGLSILMV
                     SSDMPEVLGMSDRILVMHEGQISAEFSRAEATQEKLLAAAIGKSTGLN"
     gene            complement(10040..10459)
                     /gene="rbsD"
                     /locus_tag="PXD18_000302"
     CDS             complement(10040..10459)
                     /gene="rbsD"
                     /locus_tag="PXD18_000302"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005753460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HDL6300771.1"
                     /translation="MKKTLNLNAQLSHSIATLGHTDSLTVCDAGLPIPNTIERIDLAL
                     TAGVPSFLQTFDVVVSELFVERVLLAEEIKHKNPQVLAALLERLTQLEQTQQNKIQID
                     YVNHEIFKEQTHYSKAVVRSGECSPYANIILYSGVPF"
     gene            10689..10949
                     /locus_tag="PXD18_000303"
     CDS             10689..10949
                     /locus_tag="PXD18_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001196283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HDL6300772.1"
                     /translation="MALLITHKCTNCDMCLPECPNEAISVGDDIYIIDPVLCTECVGH
                     YEKPTCQKVCPITNCIIKDPDNIETEEQLWERFVMIHHPDQI"
     gene            complement(10981..11871)
                     /locus_tag="PXD18_000304"
     CDS             complement(10981..11871)
                     /locus_tag="PXD18_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HDL6300773.1"
                     /translation="MAMNFKQVSQSYPNLCVPLSQYCLIEIAGVDAEKYLQGQLTCDV
                     AKISVGEHTLTSHCDPKGKMSALLRLYRAENEKFMAIIHRSLLPEALTQLKKYAVFSK
                     VTFTELDTPLYGMAGEAAFAKLSENMTALRLTTGQPRAIVWGEELETTADEQLWTLMD
                     IQDGIPVLLQQNQFELIPQATNLQALESAISFTKGCYIGQETVARAKYRGANKRALFT
                     LAGNFESEISLPEVASAIEMQLGENWRATGTVLTSATDENTLWVQVVLNKDVEPNTKF
                     RANGVALEMVELPYSLAENE"
     gene            complement(11880..12743)
                     /locus_tag="PXD18_000305"
     CDS             complement(11880..12743)
                     /locus_tag="PXD18_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011272075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HDL6300774.1"
                     /translation="MIYSMTAFAHLEMKKEWGNAVWEIRSVNQRFLETYFRLPEQFRN
                     LEMTLRERLRSALTRGKVECSLRIDLSKTQNSEIALNKEYAAQVVQSLKWLKETANEG
                     EINLVDVLRFPGVVDNESQDLDQIAQDLLAGFEQILADFIAMRAREGENVQALILQRL
                     EAISVEAAKVQAQMPEILQWQKDRLQQRFDELNLQLDPQRLEQEMVLLAQRVDVAEEL
                     DRLQLHVKETTNILKKGGAVGRKLDFMMQELNRESNTLASKSINADVTNSAVELKVLI
                     EQMREQIQNLE"
     gene            13024..13740
                     /gene="rph"
                     /locus_tag="PXD18_000306"
     CDS             13024..13740
                     /gene="rph"
                     /locus_tag="PXD18_000306"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001261764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HDL6300775.1"
                     /translation="MRPNNRANNQVREIKITRNYTRYAEGSVLIEFGETKVLCNATVE
                     ESVPRFLKGQQQGWVTAEYGMLPRATHSRTQREAAKGKQGGRTMEIQRLIARSLRAVV
                     DLKALGERTVTVDCDVIQADGGTRTASITGACVALYDAMNKLVANGTLKTNPMKGLVA
                     AISVGIVAGEAVCDLEYLEDSNAETDMNVVMVEDGRLVEVQGTAEGEPFSHQELLTLL
                     DLAKQGISQLVEAQRKALAE"
     gene            13964..16263
                     /locus_tag="PXD18_000307"
                     /pseudo
     CDS             13964..16263
                     /locus_tag="PXD18_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005759321.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            complement(16341..17042)
                     /locus_tag="PXD18_000308"
     CDS             complement(16341..17042)
                     /locus_tag="PXD18_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HDL6300776.1"
                     /translation="MDLQNRENFLNKLAQRMGRPRQNVPEPIPVLENNHAITRLTDRP
                     QPQLCQEFIDFARVMMADVVEAKEADLPQAIIDICEKYGGASVIVNNDQRLKDLGITA
                     AIQAKYEDSYVWDFNQAETNFEKARTANIGVVYGEYGLAESGGIVLFSDKEFGRSVSL
                     LPEKSVVVLRKSTVLPRVAQLAQILHEKAQRGERMPSCVNIISGPSATADIELIKVVG
                     VHGPVNKIYLVIDDL"
     gene            complement(17047..18456)
                     /locus_tag="PXD18_000309"
     CDS             complement(17047..18456)
                     /locus_tag="PXD18_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HDL6300777.1"
                     /translation="MSYLQTNTLPFKQRVEQQVNNEIVRKALVKAQETIGANRQRMVD
                     ELGNWEEWRDDAKAIRNHVLANLDAYLYQLSEKVTQNGGHVFFAETAEEATDYIKNVA
                     KAKNAKKIVKSKSMVTEEIGMNHVLEAEGIKVVETDLGEYLLQIVGDKPSHIVVPAIH
                     KDRHRIRQEMHDVLGYQGSETPEEMTAFVRQKIREDFLEADIGISGCNFAVPETGSVC
                     LVTNEGNLRMATTVPKTHIAVMGMERIAPTFKEVDVLITMLARSAVGAKLTAYNTWLT
                     GPRLEGETDGPEEFHLVIVDNGRSKILESEFQEVLRCIRCGACLNTCPAYRQIGGHGY
                     GSIYPGPIGSVISPLLGGYEEFKELPYACSLCTACNSVCPVKIPLAQLILKHREKIAD
                     AGLTPMAERLSIFGFNFANSHPTLWKVGVKVGAKVASKLIKNGKAPVNFGALGEWTKA
                     RDLPTAEGESFREWFNNRG"
     gene            complement(18458..19189)
                     /locus_tag="PXD18_000310"
     CDS             complement(18458..19189)
                     /locus_tag="PXD18_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDL6300778.1"
                     /translation="MNVNFYVTCIADVMKAGVAKNTVLLLEKLGCKITFLEKQGCCGQ
                     PAINSGYTKQALAGMKNLVETFEANDYPIVAPAGSCVYAIKTYPDHFERFGEKEWAER
                     AKKVADRFYDLTDFIVNKLGVKDVGAYLPGKAVYHPSCSLFRKLGIKDEPIALLQHVK
                     GLELLPIKNQETCCGFGGTFSVKMAEISGEMVKEKVANVDTDEPDYLIGADVSCLMNI
                     GGRLSREGKPIKVMHIAEVLMQGGK"
     gene            complement(19333..20937)
                     /locus_tag="PXD18_000311"
     CDS             complement(19333..20937)
                     /locus_tag="PXD18_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDL6300779.1"
                     /translation="MALFLSVFPIVLLIYLMVKRNALPSYVALPLTALLIFVLQLTYF
                     GNDTTLIFANIIAGLGDVLTPITVIFGAILFNRFSEVSGATNTMRKWLGTINPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILVGLGFKPLQVAMLALVMNSVPVSFGAVGT
                     PTWFGMGPLLKDGLLTDAQVLEIGSITALIHSIAAFIIPVMALRLIVSWKEIRQNIVF
                     IYISIFACVIPYFIIAQFNYEFPSLVAGAIGLLVSVWVANMGIGLAKSENHLDGDKAT
                     FGEVAKALLPTGLLIFILVITRIQQLPLKAMLNDATAWIVSSLGFANFEISQGLIFAL
                     KNILGTNVATSYKLLYVPALIPFVVTVLICLPIFSVSGKNTQEIFGTSFKQVKKPFLA
                     LLGAIVMVKLMLIGGVDSMVQIIGKNFAEFTGQSWTLFASFLGAIGAFFSGSNTVSNL
                     TFGTVQYATAQQVGLSVTLILALQSVGGAMGNMVCINNIVAVCSVTGIEKQEGNIIKK
                     TAVPMFVYGVIAAISALFIVPMFYNL"
     gene            complement(21227..22318)
                     /gene="ychF"
                     /locus_tag="PXD18_000312"
     CDS             complement(21227..22318)
                     /gene="ychF"
                     /locus_tag="PXD18_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001538644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HDL6300780.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVV
                     PMPDPRLDALAEIVKPERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGH
                     VVRCFENDDIVHVAGKIDPADDIEIINTELALADLDSCERAIQRLQKRAKGGDKDAKF
                     ELSIMEKILPVLENAGMIRSVDLDKDELHAIKGYNFLTLKPTMYIANVNEDGFENNPY
                     LDRVREIAEKEGAVVVPVCAAIESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYRL
                     LNLQTYFTAGVKEVRAWTVSVGATAPKAAAVIHTDFEKGFIRAEVIAYQDFIDNKGEA
                     GAKEAGKWRLEGKDYIVQDGDVMHFRFNV"
     gene            complement(22504..23091)
                     /gene="pth"
                     /locus_tag="PXD18_000313"
     CDS             complement(22504..23091)
                     /gene="pth"
                     /locus_tag="PXD18_000313"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDL6300781.1"
                     /translation="MSEIKLIVGLANPGVKYEETRHNAGEWLINELARIYNVSLKEEP
                     KYFGKVAKINTAQGEVRLLVPTTFMNLSGKAVGALANFYRIKPEEILVAHDELDLPPG
                     SVKLKKGGGHGGHNGLKDIIAALGNNKEFYRVRIGIGHPGHKDLVANYVLGKPSPSDQ
                     TLLNSAVDEAARCVEVLFKDGMVKATNRLNSFKAN"
     gene            complement(23164..24039)
                     /locus_tag="PXD18_000314"
     CDS             complement(23164..24039)
                     /locus_tag="PXD18_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HDL6300782.1"
                     /translation="MMKKFIPVMIAALVLSACSSQPAKRKSTPRIKATAAYIPTENSA
                     YVVFDLNQKKFLEGKNFNLVRPIASVTKLMTAVVFLEENRYGASCQTQILPSDADFLK
                     GTTSPLPKNLNIACSELLKAMLVRSDNYAAHALAHATHLNKAQFLARMNSKAREIGMT
                     QTYFGDSSGLSSDNVSTVVDLAKLAGYAASKPEIQQLSNSPLVSVYAGGRYFSMKNTN
                     SMVRSQSYQALVSKTGYTREAGYNLAFIAKGDCRGKRIGVVSLNNDNAASRTDFTESM
                     LAKYQCVPNPYRQYD"
     gene            24261..25841
                     /gene="prfC"
                     /locus_tag="PXD18_000315"
     CDS             24261..25841
                     /gene="prfC"
                     /locus_tag="PXD18_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014326123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HDL6300783.1"
                     /translation="MSYPQEVNKRRTFAIISHPDAGKTTITEKVLLYGNAIQTAGSVK
                     GKGSAQHAKSDWMEMEKQRGISITTSVMQFPYNDCLVNLLDTPGHEDFSEDTYRTLTA
                     VDSCLMVIDSAKGVEERTIKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVESVLK
                     IKCAPITWPIGCGKLFKGVYHLYKDETYLYQTGQGHTIQEVRVVKGLNNPELDQAVGD
                     DLAQQLRDELELVQGASHEFDHTEFIKGELTPVFFGTALGNFGVNHFLDGLTEWAPAP
                     QARQSDEREVSPSEEKFSGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLKHVRIG
                     KDVVISDALTFMAGDRSQAEEAYAGDIIGLHNHGTIQIGDTFTQGENFKFTGIPNFAP
                     ELFRRIRLRDPLKQKQLLKGLVQLSEEGAVQVFRPLINNDLIVGAVGVLQFDVVVSRL
                     KTEYGVEAIYETVNVATARWVEGKDAKKFEEFKRKNEANLALDGGDNLTYIAPTMVNL
                     NLAQERYPDVQFFKTREH"
     gene            26100..27674
                     /locus_tag="PXD18_000316"
     CDS             26100..27674
                     /locus_tag="PXD18_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6300784.1"
                     /translation="MKKWLIPLTVAAFCVSACDDKNSTQATAEKPQVENTQSQKNAEI
                     LPLATVVAPWEINSLDPNQSGVIFQRMNLAETLVEADLNGNLIPALATDWRSNEEGTI
                     WRFTLREGVKFHNDQVLTAQAVVNSLNIAKSKPGVLAKAFIKEIRAVDNKVEIELTKA
                     FVPFPPFLTHYTALILAPESYNEKGEVTQIIGTGAFKPTKIEAPQKLEAVQFEGYWGK
                     KPQVQQANYLASSRSETRMLMAQSEPSSLVFNLDTASVARLKADPNLQLVSGSIARTI
                     QLKMDVAKPFFNDLAIRQALSQAINRKAIAEQVLKIENGAADQILPKAFADWRVDTAE
                     QVVDIAKIKQNLTASGYTFDEQGRLTKDGKPFSFTMRTFSDRPELPVIATILQAQWKQ
                     IGVEVNVSVGNFSEIPAGHQDGSLEMALYALNYGKTLDPYGVIASDFANGGSDWGVMN
                     WQNTEVDNAVKSLETERDPQKAKALKQTVSKIIYNDLPIIPVVYYQQNVVAHKEVKNV
                     TLDPFERRFFLELLSK"
     gene            27894..28826
                     /locus_tag="PXD18_000317"
     CDS             27894..28826
                     /locus_tag="PXD18_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6300785.1"
                     /translation="MHKILFRRLIQILLVIWSVGTLTFILTRQLSGDMAYRIAASRYG
                     YDQADSAAAEAVRAELGLDQPWWQSYFSWLSDLAQFNLGKSLVTGDPVWSEIQHQFGH
                     TLSLAIVALILAILIGPPLGLLAARKPNGFFDRLTLVFSTLFRSVPAFIIAIGLITLF
                     SAQLKWLPAGGYGCWQHFILPALTLAIGLSTVSVRVTRSAMVQVKGSEFYQFSQLKGL
                     SRWHTFLRHGLPNIAVPVIAYHAVQLVYLIEGVVVVESLFAWPGSGHALVHAIIARDV
                     PMIQGTTLVMGGLFVVLNTIADLLSAWIDPRIKR"
     gene            28836..29618
                     /locus_tag="PXD18_000318"
     CDS             28836..29618
                     /locus_tag="PXD18_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6300786.1"
                     /translation="MKISISQYLGGTILLAMLGFAFLQPYFYPMDIGFQDLTNILSNP
                     NEIAWFGTDHLGRDMLARLASAIRLSFGLSLFSVICALIAGLITGIMAGFFGGWIDRI
                     FSFICDLVMALPGLLLVLLFAALSPGSFWTLYLGISLVMWVEFFRVIRSISSTMANSS
                     EIQASRLMGMGWFYSFKRHLLPRLLPMIATLSAFSLGNAILALATLGFVSVGLRPPTA
                     ELGLMMTELFPYYYEAPLIFLQPVVAVFLMVLSLQLLSRKIK"
     gene            29707..31119
                     /locus_tag="PXD18_000319"
     CDS             29707..31119
                     /locus_tag="PXD18_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6300787.1"
                     /translation="MKLLDIQNLSVETENRLQLVEPISLQLKAGKNITILGETGSGKS
                     LLIQAIMGALPDGLIASGEISVKNCKISTESDRLQTLWGKTLVMLPQEPRRSLNPIMA
                     IGKQLWESFHYVAGKPSSQAKTESKAYLAKLGLGESVENYPHQLSGGMAQRASFAIAT
                     AAGGKILLADEPTKGLDPISKGKVIELLKSAYQNGGGLLTITHDIEVAEQLGGTILVM
                     KKGELLEQGEAKALLNNPQHPYTKALISADPKHWQPLQDLQNLSQKQPLVSVKNLSIA
                     RGKKTLFSNLSFDLHKGEVLGIVGHSGIGKSSLADVLCGLLKPKSGEVVWHSHSHKKH
                     QVLKLYQDPPEAFAPNVSLKTLLDDVINKHQLDRLPIPSLLQQLSLNPEILQRNAENV
                     SGGELQRVAILRALLLEPVLLFADEVTSRLDPITQQETIELLINQCRARNCSLILVSH
                     DPYLIEKSCDKVINLEEYVG"
     gene            complement(31206..31949)
                     /gene="rlmB"
                     /locus_tag="PXD18_000320"
     CDS             complement(31206..31949)
                     /gene="rlmB"
                     /locus_tag="PXD18_000320"
                     /EC_number="2.1.1.185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HDL6300788.1"
                     /translation="MSEQIYGIHAVKAFLDNAPERLIEVLVLKGREDKRLMPLLNELQ
                     RLGVAIQQVNRQTLDNKSQGEVHQGIIARVVPQKELNEHDLEAILSQKKNPLLLILDG
                     VTDPHNLGACLRTADAAGVDAVIVPKDKSAQLTPTARKVACGAAEVMPLIRVTNLART
                     MRDLQERHNVWIVGTAGEAESGIYEAKLTGSIALVMGAEGDGMRRLTREHCDQLISIP
                     MAGSVSSLNVSVATGVCLFEIVRQKLAGQ"
     gene            complement(32004..33371)
                     /gene="pssA"
                     /locus_tag="PXD18_000321"
     CDS             complement(32004..33371)
                     /gene="pssA"
                     /locus_tag="PXD18_000321"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HDL6300789.1"
                     /translation="MLILNKQRKAEYLLKSLPYLPQVAEQVQFLASSKAFKQQILQLI
                     QTAKKRIYITALYFEKDEAGQEVLAALYQAKRNNPELEINILVDWHRAQRGRIGEAEN
                     LSNADWYAKVKYEQGLPAGQEIAFYGVSINGREVFGVLHLKGFVFDDTILYSGASINN
                     VYLHQFERYRYDRYHVIENKVLADSWVTFIQQHLLTNEAVKRLDTENRPKTAEIRAQI
                     KHFRKQLSREAYLFNGVAENGRLAVSPLVGLGRRKNQLNKVIEALFYQTEQKLTICTP
                     YFNFPHSLRTRIEWLLANGKSVEIIVGDKTANDFYTKPDEKFTMASALPYLYEKNLRA
                     FAKRLDGYVQNKQLTIRLWKDGENSYHLKGVWVDNRYILLTGNNLNPRAWRLDAENAI
                     LISDPQHQLSEKAETELNQICQHTQILTHYSDLEVLTDYPENVRKLLKKFGRVKLDKI
                     VKMLL"
     gene            complement(33441..34988)
                     /locus_tag="PXD18_000322"
     CDS             complement(33441..34988)
                     /locus_tag="PXD18_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HDL6300790.1"
                     /translation="MMKIIAFLFIFLSVFSHTALANSMAEQCVALKSNSPEKTAIYKA
                     EWVEKSAELPAYCLVQGEIGKRVEVDNVPYGIQFELRLPEQWNEKFLFQGAGGVGGVI
                     FPAIGKLYPHGASGANGLNRGYAVVSNDSGHATRDLVFTADPEARSNYAYASIGKVTT
                     VAKQLIAEFYRKPSKHNYIMGCSNGGREAMMAAMRYPQEFDGVIAGSPGFRVSRSVLA
                     EVWDNRALLAVAPKNGDGDKILSQALTQQDLDVIANGVLTRCDKLDGLADGLINAWEQ
                     CDFQPEMVAKQLGQKKVALIKTIFEGAKNSRGELIYSPWAYDSGINAKGWRDWKLGDS
                     QTAQPNSISFKMGLKSLTHYYLAPRVPSRDPLSVDLDQASEQVKAVGSIHDTDQVDLS
                     AFKQNGGKMLIYQGVSDPIFSAVDLKNWYQSLQQAVENPQHFAKLFFVSAMNHCGRGA
                     TVNDFDMLTALENWVEKGLEPESIAAKAGELYPNKAKQIPLCAYPKVAIYQTGEDPNR
                     LTSYQCR"
     gene            complement(35113..37929)
                     /gene="ileS"
                     /locus_tag="PXD18_000323"
     CDS             complement(35113..37929)
                     /gene="ileS"
                     /locus_tag="PXD18_000323"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HDL6300791.1"
                     /translation="MTIDYKNTLNLPETGFPMRGDLAKREPDMLKNWYDKNLYQKIRT
                     ASKGKKTFILHDGPPYANGNIHLGHAVNKILKDMILKSKTALGFDTPYVPGWDCHGLP
                     IELKVEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWDNPYLTMNF
                     NTEANIIRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFNAV
                     DVNAVEEKFNAQGKGRGALSAVIWTTTPWTIPSNRAIAINPELDYALVQLGDERVLLA
                     VDLVEDVAKAAGVESAEILATTKGENLELLRFNHPFYDYSVPFIFGDHVTTDGGTGLV
                     HTAPDHGADDFVVARKYNIEMAGLISNDGKFKADTPFFAGLGVFESNDKVVEKLQEVG
                     ALLKLSRIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKSVRWIPSWGE
                     ARIDTMVANRPDWCISRQRTWGVPMAMFVHNETEELHPRTLELIEEVAKRVEEKGIQA
                     WWDLDPAELLGEEAKDYRKVPDTLDVWFDSGSTYASVVEQRPEFNGNSADMYLEGSDQ
                     HRGWFMSSLMLSTATNGKAPYKQVLTHGFTVDEKGRKMSKSLGNVIVPSEVWNKNGAD
                     ILRLWVASTDYTGEITVSHNILNSAGESYRRIRNTARFLLANLNGFDPKSDLVQPQEM
                     IALDRWAVACALEAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTK
                     ADSLARRSCQTALWHIAEALVRWIAPILSFTADEIWGYLPQVEGRSEFVFTEEFYTGL
                     FGLTEQDKLDDAYWQQILKVRAEVNRVLEQARKDKVIGAGLEAKVTVFANDEIRPLLE
                     QLGNELRFVLITSQAIVKPLAEADIAEGELAGLAVKVENADGEKCPRCWHYATDIGSH
                     SGHEEVCGRCVENVAGEGEKRLFA"
     gene            complement(38032..38994)
                     /gene="ribF"
                     /locus_tag="PXD18_000324"
     CDS             complement(38032..38994)
                     /gene="ribF"
                     /locus_tag="PXD18_000324"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HDL6300792.1"
                     /translation="MQLIRGFHNLDKHIALNQGCVLSIGNFDGVHLGHQNILARLCDR
                     ALDLGLPSVVMLFEPQPREFFAKKSGNSTACNPPARLMRLRDKLKYLEEAGVDFVLCV
                     RFSEKFAQISADDFISDLLAKRLKVRYLSVGDDFRFGAKRAGSFETLRNAGLKYRFAV
                     EESHTHSLNEERISSSLVREALQNNELDLAEKLLGKPYSILGRVAHGNKLGRTIGFPT
                     ANIMLNRLVTPIQGVFAVKVKTKQGSFNGIANVGNRPTINGTKPLLEVHIFDFNASIY
                     GEAIEVIFLKKLRNEIKFPDFEALKAQIEKDRLQAVEFFKEFAR"
BASE COUNT        11124 a         8983 c         7745 g        11248 t
ORIGIN      
        1 ttaaactttt tgaacagaaa tctgtacgca gtcattacga tgaagaaaaa gataaatggt
       61 atttttctat tattgatgtg attgctattt taaccgaaag cctagatccc tctgcttatt
      121 ggcgtaagct aaaacagagg ctaaaggcag aaggcaatga aaccgtgaca aattgtcacg
      181 ggttgaaaat gccctctgct gacggaaaaa tgcgtttgac tgatgtagca gataccgaac
      241 aacttttccg acttattcaa tctatcccta gtccgaaagc agagcccttc aaacaatggt
      301 tagcaaaagt aggttatgaa cgcttacagg aaataaacga tccaagtcaa agtctagatc
      361 gagcaaggga gaattggcag aagatgggac gaagtgaaaa atggattcag caaagaatga
      421 tgggacaaga aacccgaaat aaactgaccg attattggaa atcgtcaggg gttgaacagc
      481 cacaagattt tgcattttta accaatgtga ttcatcaaga atggagcgga ctatctgtac
      541 aaaagcataa atcgcttaaa ggtttaaaaa gccaaaatct gcgagatcat atgagcgaag
      601 ctgaattgtt atttacagca cttgctgaac tttccagtcg gcaaattgca gaaagtatgc
      661 aggcagttgg ggttgatgaa aatgcccaag caggaaaaca aggtggcaat attgccaaaa
      721 atgcccgtca ggaattggag aataaaacag gtaaatcagt tgttaccgga gagaattttt
      781 tacctccagc taaaaatgaa gaagaataga cacaatagat gttcttaatt agtcaaggtc
      841 gagcctcccc caaccttgac cacaaacttg caaaaaatag ccaaaatcac accgcttgca
      901 agttaaatag attgtgccgc taccgcattt tggtagccga attgtcgcca cgcctcatac
      961 acaaccaccg ccaccgagtt agataaattc atactgcggc tgtctttgca catcggaatg
     1021 cggatttttt gcgacatcgg catttccgct aataatggct ttggaatgcc tctgctttcc
     1081 ggcccgaaca ttaaaaaatc gccaagttca tatttcacat cactgtggtt ctgctcccct
     1141 ctggtggtta aggcgaacaa gcgtttaggc ttagcacgct caaggaaatc ttcaaaattt
     1201 ttatattttt gaatatccac aaattcgtga taatccagcc ccgaacggcg gagcttttta
     1261 tcgtcccaac caaagccgaa cggttcaatc atatgcaaac gaaagccaca gttggcacaa
     1321 aggcggataa tatttccgct gttttgcgga atttcaggtt cgtataaaac aatatctaac
     1381 attttttagc cttactctct ccccttgtgg gagagagacc gaaaaatatt tcgttcagaa
     1441 atatttttca gagagagggg gaaataactc tttcatcagt aacttcttac cctctccctg
     1501 atttttcttc tgaacgaaga aaaatctatc cctctcccac aagggtcgag ggtattatct
     1561 atacattctt cacaatccaa caattatgga tttgcggatt gcgttcaaaa tccaacggta
     1621 aggttttatg cgaaatattt tccgccgtta agcctaatgc tgccaaaccg tcaaaatcca
     1681 ttttaaagcc acgcttattg ttcgagaaca caatggtacc atcagcggtt aaaatacgtt
     1741 taagctgttt cattaactca atatggtctc gttgcacgtc ccaactgttt tccattcgtt
     1801 ttgagttgga gaaagtcggc ggatcgacaa aaatcagctc aaatcgctca cggcattctg
     1861 ccagccattg caagcaatcg gcttggaaca aacgatgatg gcgaagtgat aaattattca
     1921 gctctaaatt ttgctccgcc cagttcaaat aggtgttcga catatccact gtagtggtcg
     1981 attttgcccc attaagagca gcgtgaaccg tagctgaacc cgtgtaggca aacagattca
     2041 ggaatgtttt gccttttgcc atttcgccca ccattttacg ggttaagcga tggtctagga
     2101 acaaacccgt atccaagtaa tcggttaaat tcacccacag tttcgcccca tactcgttca
     2161 catagaaata ctcgccttta ttggcaagtt tttcgtactg attcgtgcct ttttgttttt
     2221 ggcgaacttt caacactaat ttattagttt caacacctgt cacataaagc gtagcagaga
     2281 ctgcatctaa caagcgttgg cgggcttttt gctcatcaat atttttcggg gcttggtatt
     2341 cctgcacaac aatgtggtcg ccatatctgt ccaccgctaa attatattca ggcagatcgg
     2401 catcgtataa acggtaggca tcaatgcctt gttgtttcgc ccatttttcg atctttttga
     2461 tatttttggt taagcgattt gcaaaatccg gagcgacttg agcattctgt tcaaattgta
     2521 aattttcatc taaatctgac cgcttgttat gctcgctgat ggagtaattt ttctgcacac
     2581 aatccaacgg accgtttttc gctttgaatt gacgggctga acgtaaacgc aggcaattta
     2641 acaattcagg ctcgccgcta aaaattgagg cattccaacc ggcaaattgc tgttttaggc
     2701 gttgcccgaa caccgaataa agagcaatta acgccggcgt tgtgcctaaa cgttcaccat
     2761 aaggggggtt acacaccacc gtgccgattt tttccggaat cggatttttt aacgcagcca
     2821 catcaccttg ttgccattga atgagatgat ctacccctgc atttttcgca ttttgctttg
     2881 ctttagtcag cacacgatga tcgagatcaa aaccgaagaa cattttttgt agggacgaat
     2941 tgcaattctc ccctaccgca cccaattcaa catttcggaa tgcctcatct aacacggctt
     3001 tccacatcgc ttgttgatgc cctttccacg cattaaagcc ccaatgttta cggtgaagtt
     3061 gaggggcaat attcgctgcc atttgtgctg cttcaatcag taacgtgcct gaaccacaca
     3121 tcggatcaac caatggcgtg ccgactttcc agccggaacg caaaataatg gctgccgcca
     3181 atgtttcacg caacggagct ttaccggttt cttcccgata gccccgaata tgtaaggcat
     3241 ctccacttaa atcaagcgaa accacaacat tttcacgatc caaataaaca tgaatgcgaa
     3301 catccggatt atctttatct actgttgggc gggcaaaacc tttgcgttca aagtaatcca
     3361 caatgccgtc tttcactcgc attgccccaa attgggtgtt gcggatttct cggttagtgc
     3421 cgctgaaatc aatgtaaaag gtatcacggg gatcgaataa atccgcccag ttaaatgaca
     3481 cgatggaagc atataaatcg ctatcactaa aaattttggt gctgatgagc ggcagtaaga
     3541 tccgagaggc taaacggctg tgtaataatg cctgataagc ccctttttgc gtggtggtaa
     3601 aatgcacacc gccttgagcg actttgcatt ctgccgcaca aatctgctcc agttcggttt
     3661 ttagtatttc ctcaaaacca cgggctgccg tggcaaaata ggttgtttga tttgtcattc
     3721 ttttcacact tgaaataaaa attggcagta attatagccg aacaagcggt ctttttcttg
     3781 caaagttttg caatttcttt tttagttaaa aattagctaa gatcaaaaaa gcggcattta
     3841 gtaaatccct aaacttgcta ttttgaatta ataattgcaa aattaaccga ttaagagaaa
     3901 ggaaaggaga aataaatgac agctccaact caaattttac tcattgacga ccacccatta
     3961 atgcgtcagg gaatgcgtca actattggaa ttagatcacc aatttagtgt agtgggtgaa
     4021 gcaagcaacg gcaccgacgg tatcaaactt gcattacgac ttgagccgga tgtgattatt
     4081 ctggatttaa atatgaaagg gctttcaggg ctagatactt tacgctcatt gcgcgctcaa
     4141 ggtatagatg ccagaatcat tgttttaaca gtgtcagacg agcaatccga tgtatttgca
     4201 ttaatggatg ctggtgtgga cggctattta ttaaaagata ccgacacccc ggaactacta
     4261 gataatatcc gtaaagcggc tgccggtgaa gtggtattaa gcgaaaccgt tcgccaacat
     4321 ttactcaacc gccagccaga aaatgatcct ttaagttgct taacagatcg tgaactggat
     4381 gttttacaat ggctcgcaac cggtatgtcg aacaaacaaa ttgcggctca gctctttatt
     4441 tccgaagaaa ccgtaaaagt gcatatccgc aatttactgc gtaaattaaa cgtgcattcc
     4501 cgagttgccg ccaccgtgct ttatttggaa cagcaaaaag gctaattgaa atcggataaa
     4561 aaacgctgaa taacttcaca ttattcagcg tttttgttta ttgtttggat tgaatgcctt
     4621 aaaactaatt caggttcaag cattatggtt tgaaaatcag tggatttaaa acgaattcgt
     4681 tttagcaaag tttccaccgc aagccgcccg agttccgctt tgggctggct aatggtactc
     4741 agcggtgggg aaaggtattt tgccagttca atatcgtcat agccgataat cgaaatatct
     4801 tgcggtattc gtaaaccttg ttgccagatt gcttggtaag cccctagagc aatggtgtcg
     4861 ctacaggcaa ataccgctgt cggcttttcg ctttgggcaa gcaaagcatt cattccatta
     4921 accccgccgg caaaatcaaa atggctttcg aacacccagt ttggattgag tggaatattc
     4981 gcctcggcaa gtgctttttt gtagccttct aaacgatttt ttgccaatga tttttttagg
     5041 tttccagtaa taatcgcaat cttagaatgc cctgcttcaa ttaaggtttt tgttgcgaga
     5101 tagccgccgg atattgaatt ttcaaagatt ttatctgcat tgagctcggt aaaccaccag
     5161 tctaacacca ccaatggcag cggaatattc aagctctcat cggcattcaa tctggtatcg
     5221 ccacacatca gtaacaagcc atctactttt cgttgcatca gcatttgcaa atggtgttgc
     5281 aaacgctcgg tgtcaccgtt ggtagtggca ataatcaggt tatattgatg ttgctggcaa
     5341 tattgctcca cccccgccat cacctccgca aaaaacggat tgccggttgc cgttaccagc
     5401 attccgatgg ttttagtttc attcactttg aggctacgag ccaatgcaga aggcgtgtaa
     5461 ttcagttctt tcaccaccct ctgcactctt tcccgaattt cctcgctgac aaatcggcta
     5521 ttgttgataa cgtgagaaac ggtcgaggtg gaaacctgtg caagccgtgc aatatccttc
     5581 attgttgcca tttgcaaaat tttcctaaaa actcaccgct tgttggctta gaaaatccag
     5641 tgtttcctga cgggtcggaa tagaaggttg agcccctttg cgagtcacac taatcgctgc
     5701 cgctgcgtga gcaaaacgaa tggcttgatc cagcggttta tcttctaaca ttgcagtcac
     5761 taatgctccg ttaaaagtat cccctgcggc agtggtatcc accgcttgaa cacggaagcc
     5821 tgcaacgatt ttgcctacac cgttttcgct tacaaatacc ccttttgagc caagtgtaat
     5881 caacactttt tcgatgccct tttggtgaaa cacttgtgcg gcttgaatcg cactggcttc
     5941 atcaacaact ttcacaccgg ttaatatttc cgcttccgtt tcatttgggg taatcatatc
     6001 cagtaagttt aacagttcat cgggtaacgc tcgagcaggc gcagggttta atattacttt
     6061 cgtgccgttt tgctgagcca attttgctgc ttgcacaatc gccggcaacg gtgtttctag
     6121 ctgcattagc aaataatccg cctgtgtgat ttcggctgca cactttgcca caaccgtttc
     6181 atccaaatga ccgttcgctc cggctgaaat cacaatactg ttctcgcccg attccgccac
     6241 ttgaatcatt gcaatgccgg tcatttcatt cggaatcgtt ttaatcgagc gagtgtcaat
     6301 gccatcttgc tcaaaggctg atttcattgc tttgccgatg tcatcactgc caatacaacc
     6361 gatgaaagaa accttagctc ccaaacgtgc tgccgccacc gcctgatttg cccctttacc
     6421 gccataagca atgtggcagc tatgtccggt gagcgtttcc cccggtttgg caaaataggg
     6481 aacggaaatc acgtgatcag cgttaatgct accgagaacg gtgagttttt tcatattaag
     6541 ccctcaaatt acctagtaca acaaaactag gattctgata gcactagtct ctgacgagtg
     6601 ctattttatt aattcaaagc gttcgtcaga gacgaacgct atcttcaagt ataattattt
     6661 tgaaataacc tttaaatcaa ccggaatttt tgcttccact ttttcgcctt ttagcacttt
     6721 atcggcagtt tctacgccta atgagccaat cagttcaggt tgttgagcaa tcgttgcggc
     6781 aagtttaccg ctttcaacgg cttttacgcc atcatctgtg ccgtcaaagc ccacaattac
     6841 aacctctttc ttcgctgaac tcactgcacg caaagctcct agtgccattt catcattttg
     6901 agcaaaaata gcttgtacgt cccctttgct tgagagcaag ttttcagtca catttaagcc
     6961 tttagtgcgg tcaaaatcag ccggttgact ggctaataca ttgaatttat gtgcttcaat
     7021 cgcttgttta aagccttcac cacgttcacg agcggcggaa gtgccggcaa tgccttctaa
     7081 ttgaatcact ttcgcccctg agcctaattt ctgagcaatg aaatctcccg ccattttgcc
     7141 gccggcaacg ttatcggaag cgatatggct aaccacttcg ccttttgctg caccacggtc
     7201 aagtgtaata accggaattt tgttgcgatt tgcaatagcc accgcatttc cgaccgcttc
     7261 cgaatcggtt gggttaatca ataacacttt tgccccacgc accgttaagt cttccacatt
     7321 ggaaagctct ttagccgggt cattttggga atcaagcacc actaatttgt agcctaattc
     7381 atctgctttt ttctgtgcac cgtctttaag gctcacaaag aatgggttat ctaaagtcga
     7441 tactgcaaga gcgatagtct cttttgccga agcagtggct gcaaccgata aacttaacat
     7501 aaccgctgat gcaatcgtag ttaatttttt catagaaatc tcctttaaag atagattaaa
     7561 cttttttagt gcctagataa ttatcagcta atacagctgc taaaataacc aacgctttag
     7621 caatcatctg ataatatgaa gaaatatcca ataaattaag ggcattgttt aagaaaccga
     7681 taattaatgc cccgacaagc gttcccatta cacgcccttt accgcccatt agactggttc
     7741 caccaacaac taccgctgca attgcgtcta actcatagga cacacctgcc gttggctgag
     7801 cagaagagag acgtgaagtc acaattaagc cggcaagagc agataaaaaa ccactcacgg
     7861 caaatacgaa gatcttaatt ttattcacat tgatgcctga aagctgggtt gccgattcgt
     7921 tgccacctaa agcgtaaatg taacgcccaa tcggggtgtg tttcaaaata taccaagcta
     7981 acccaaacac taccgccata atccaaatcg gcacaggaat accaaataaa tagcctgtcc
     8041 caataaacgc aaaggcgtct gcttggtcag aaaagccggt gctaatcggt ctgccatcgg
     8101 tataaaccat cgtaatccca cgcaataagg tcattgtgac caaagtcgca ataaatgcct
     8161 gcactttacc tttagcaaca atcgccccac taataccacc aaatgccgtc cctaataata
     8221 aaaccagcgg aatcaccaac aaaatcggca attcagaacc gactaaggtc gctgcaaccg
     8281 caccggttaa ggctaaaacc gaaccgaccg ataaatcaat gcctgcaatt aaaatcacaa
     8341 aggtcattcc gaccgcaata atcgcattca ccgaggtttg gcgtagaata tttaaaatat
     8401 tatccacgct gaaaaaatca gggttaatca ttgaaacact gacaattaaa ataaataacg
     8461 ctacaaaaga acgttgctcg attaaaaatc tgccaagttg aaactgcttt gtttgagttg
     8521 ccataaacac accttaattt aatcctgtac ttttgccaat agctgctgcc agtagctttt
     8581 cttgtgtcgc ttctgctcgt gaaaattctg cactgatttg cccttcgtgc atcactaaaa
     8641 tgcggtcgct cattcccaac acttccggca tatcggacga aaccatcaaa atactaagcc
     8701 catctttttt aaattcatta attaattgat agatctcttt tttcgccccc acatcaacac
     8761 cccgtgtcgg ctcgtctaaa atcagcacat tcgggcgggt catcaaccct ttagcgatcg
     8821 ccactttttg ctgattacca ccggaaagca gcccgatttg ttgctcccga cttggggttt
     8881 taatgttaaa catctcaata aaatcatcga ccgccaattt ttctgcatcg tggcgaatac
     8941 tgccggcttt ggagaaatga tcgagagagg tcaaagacat attttctttt accgacattc
     9001 ccaaaatcag accatcgcct ttacgatctt ctgaaatata cacaatgccg ttattcaacc
     9061 catcttgcgg acaatggttg gaaatcgctt ttccatttaa ctctatcgag ccggctgttt
     9121 tcggcaatgc accataaagc accttcatta attctgtacg ccctgccccc attaagccgg
     9181 aaatacccac aatttcacct ttgtgtaatt ggaatgacac attattcacc ccacttccac
     9241 ttaaattctt cacttcaagt aataactcgc cacgctcttg gtgtaaatgc ggatattgct
     9301 cttccaaacg gcgaccaacc atcatttcaa ttaactgatc ttcatcaata tcggcaatta
     9361 ctcgctcgcc gataaattgc ccgtctctta gcaccgtcac atcatcacaa atttcaaaaa
     9421 tctcttttaa acgatgggaa atataaacaa tgcctcgatt ttccgctttt aactctcgaa
     9481 taactttaaa caacgatgct gtttctgtat cggttaaagc atcggtcggt tcgtccataa
     9541 taattacttg agactcaaaa ctcagggctt tcgcaatttc caccatttgc tgctcgccaa
     9601 tggataactc cgcacaaagc tgatggctac tgtgttttac cccaagtcgg gcaagcagtt
     9661 tatccgcctc ggcatacatt tttttccaat caatagctcc ccaagcggtt ttggactcac
     9721 ggcccaaaaa aatattttca gcaatggtta aattaccgac taaattcagc tcttggtgaa
     9781 taatgctaat accggcttct tgtgaatctt tcgggccttt aaaggtaact tctttgccta
     9841 aatagctaat agagccggca tctttgctat aaatccccgt caatactttc atcaaggtgg
     9901 atttacctgc cccattttcg cccattaatg ccattactcg cccaccgtaa acagataagc
     9961 acgcattgct caaggctttc acgccgggaa attctttatc tatcccgctc atttttaata
    10021 aggtttccat cattccaccc taaaacggca cgcccgaata taaaataata ttggcatacg
    10081 gtgaacactc acccgaacgc acaacagctt tactgtaatg tgtctgctct ttaaagattt
    10141 cgtggttcac ataatcaatt tgaattttat tctgttgagt ttgttctaat tgggttaaac
    10201 gctccaaaag agctgctaac acttgcggat ttttatgttt aatttcttca gcaagtagca
    10261 ctcgttcaac aaataattca ctaactacta catcaaatgt ttgtaaaaaa cttggcacac
    10321 cggcggttaa agccaaatcg atccgctcta ttgtgtttgg aatcggcaaa ccggcatcgc
    10381 aaaccgttaa actatcggta tgcccgagtg tcgcaatact gtgcgaaagt tgtgcattta
    10441 gatttagcgt ttttttcata ctaacccctt tattttcgct ccatcacgtt ggaaaatact
    10501 ccatcgaaac gtttcgatgg catcataaaa aattttctta atcggataaa caaccaaatt
    10561 gcaaaaatgt gaagtagttc aaattatttt gctttataat aggtagcatt tagtgacaag
    10621 cggtaagatt tgcaaatttt tttgcaaaat cgaccgcttg tttaattttt attttctcaa
    10681 tataaactat ggctttatta attacccaca aatgtaccaa ctgtgatatg tgcttgccgg
    10741 aatgcccgaa cgaggcgatt tcggtgggcg atgatattta tatcatcgat ccggtgttat
    10801 gtaccgaatg tgtcgggcat tatgaaaagc cgacttgcca gaaagtttgc ccgattacca
    10861 actgcattat caaagatcct gataatatcg aaaccgaaga gcagttgtgg gaacgttttg
    10921 tgatgattca tcaccctgat cagatataaa aaaacggtca taccctgatg accgttcgtt
    10981 ttactcattt tctgccaaac tataaggtaa ctcgaccatt tccaacgcta caccattggc
    11041 tctaaacttg gtgttaggtt caacatcttt attcagcacc acttgcaccc acagggtatt
    11101 ttcatcagtc gcactggtca acacagtgcc ggttgctcgc caattttcgc ccagttgcat
    11161 ttcaatcgca gaagcaactt ccggtaagct gatttcgctt tcaaagttgc cggcaagggt
    11221 aaataaagca cgtttattcg ccccacgata tttcgctctc gctaccgttt cttgcccgat
    11281 gtagcaacct ttggtgaatg aaatcgcaga ttcaagtgcc tgtaaattgg ttgcctgtgg
    11341 aatcagctca aactggtttt gttgcaagag aacaggaatg ccgtcttgaa tatccattaa
    11401 tgtccagagc tgttcatcgg cagtcgtttc aagctcttcg ccccaaacaa tggcccgagg
    11461 ctgtcctgtg gttaaacgca aagcggtcat attttcgctt aattttgcaa atgctgcttc
    11521 acctgccata ccataaagtg gggtgtctaa ttccgtgaag gtcacttttg aaaaaaccgc
    11581 atatttttta agttgcgtca gggcttcagg caataagctg cggtgaatga tcgccataaa
    11641 tttctcattt tctgcacgat acaaacgcag taacgcactc attttgcctt tcggatcaca
    11701 atggctggtt agcgtatgtt cgcccaccga aatttttgcc acatcgcagg ttaattgccc
    11761 ttgaagatat ttctcagcat ctacccctgc gatttcaatt aaacaatact gagaaagcgg
    11821 cacgcagaga tttggatagc tctggctcac ttgcttgaaa ttcattgcca taatctgtcc
    11881 tattctaaat tctgaatttg ttcacgcatc tgttcgatca acactttcag ctccaccgcc
    11941 gaattggtca cgtccgcatt aatcgatttt gaggcgagcg tgttggattc acggtttagt
    12001 tcttgcatca taaaatccag tttacgccca accgcaccgc cttttttcag gatattggtg
    12061 gtttctttaa cgtgtaattg caagcggtct aattcctccg ccacatcaac acgttgggca
    12121 agtaacacca tttcttgttc taagcgttgt ggatcaagct gtaaattcag ttcatcgaac
    12181 cgttgttgta aacgatcttt ctgccattgc agaatttccg gcatttgggc ttgtaccttt
    12241 gcagcctcaa ctgaaattgc ttctaaacgt tgtaagatca gggcttgcac gttctcgccc
    12301 tctctggctc gcattgcgat aaaatctgcc agaatttgtt caaagccggc taataaatct
    12361 tgagcaattt ggtctaaatc ttggctttca ttatccacca cgcccgggaa acgtagcaca
    12421 tcaacaaggt tgatttcgcc ttcatttgcg gtttctttta accattttaa tgattgaacc
    12481 acctgtgcgg catattcttt gtttaacgca atttcactgt tttgggtttt gcttaaatca
    12541 atgcgtaagc tacactctac tttgcctcgt gtcagtgcag aacgtaaacg ctcacgcaag
    12601 gtcatttcta ggttgcgaaa ctgctccggc aaacgaaaat aggtttctaa aaagcgttga
    12661 tttaccgagc gaatttccca caccgcattg ccccactctt ttttcatttc taaatgggca
    12721 aatgctgtca tactataaat cattggtatt ccttgtgttt ttataagtaa agctctctcc
    12781 ccttgaggga gagagaccga aaaatatttc gttcagaaat atttttcaga gagagggagg
    12841 aatttgtaaa atttgagata aaaataaccg cttacccctc tccctgattt ttcttctgaa
    12901 cgaagaaaaa tccgtccctc tcccacaagg ggcgagggct atgtaaattc tttgctaaag
    12961 aaaaatcaca ttttactgtg ttctttgcta aaatggtaaa aattttagca aaaggaaaag
    13021 aaaatgcgtc caaataatcg agcaaacaac caagttagag aaattaaaat tacccgtaac
    13081 tacactcgct atgccgaagg ctcggtatta attgagtttg gcgaaaccaa agtattgtgt
    13141 aacgctacgg tagaagaaag cgtgccacgc tttttaaaag gtcagcaaca aggttgggtt
    13201 accgcagaat atggtatgtt gccacgagcc acccactctc gcactcagcg tgaagcggca
    13261 aaaggcaaac aaggcggacg cacaatggaa atccaacgct tgattgcccg ttctctgcgt
    13321 gcggtggtag atttaaaagc cttaggcgaa cgtaccgtta ccgtagattg tgatgttatt
    13381 caagccgatg gaggcactcg caccgcctca attaccggtg cgtgcgtagc attgtacgat
    13441 gcaatgaata agttagtagc taatggaaca ctaaaaacta acccaatgaa aggtttagtc
    13501 gcagcaattt ctgtcggtat tgtagcaggc gaagcggtgt gcgatttaga atatctggaa
    13561 gattccaacg ctgaaactga tatgaacgtg gtgatggtcg aagatggtcg tttagtggaa
    13621 gtacaaggca cggcagaagg cgaaccgttc tcgcaccaag aattactgac attgctagat
    13681 ttagcgaagc aaggcattag ccagctagtt gaagctcaac gtaaagcgtt agctgaataa
    13741 ttcacttctc tttttgattt tctttttaaa taaaatctac atctgacaaa acagaataac
    13801 cgttctgatt cagatgtaga tttttttatt tcccttttca aaatacactc aatcataaaa
    13861 taacaattat ttttttatgg aaatattgca cttcttacaa aatatctgta aatttcattg
    13921 ccattatttt tttatggcta tttattctag aaggactcta aacgtgttaa agaaaaatta
    13981 tctcactgta tcaattctcc ttgccattag tggagtaggc tacgctaatg aaatctcttt
    14041 agagactatt actgttgatg gaaatacgcc ttcaaccaaa gggaaattac taggtggtga
    14101 actaaatagc aatgaatctg ttgttgatga aaaaaattaa aacaaggtag tattacatta
    14161 ggtaacgctt tatctggtga attaggcatt cattcaagcc agttcggagg cggtgcaagt
    14221 accccaatta ttcgtgggca agagagtaaa cgtgcaaaaa tcttacaaaa taatggcgaa
    14281 aacttagata tgtcgggaat gtctcctgat catgcagtaa ccgtagatgc gctacttgct
    14341 aaacgtattg aaattttacg tggtccaact actttacttt acagtgcagg taatacggca
    14401 ggtgtaatta atgtggtaga caataaaatt ccaaccgcta ttcccgaaaa aggctatgag
    14461 gggcaatttg gtgtgcgttt tggctcagcc agtaaagagc gtttaaccta tgcaggctca
    14521 acctttgccc ttggaaatca tttagccttg cgggtacagg gaatgtataa caaagcttcc
    14581 gaatactatg ctccacactt tacgattgaa ggcaaacctt accaccgcgt accagatagc
    14641 gatgtacaat cacaaaccgg cacagtaagc ctttcttgga ttggagagcg aggacatctt
    14701 ggtattgctt acactgatcg ccgtgataaa tatggattaa ttggtcacac acacaaatac
    14761 gatcactata ctattagtat tattcgccaa gccgttatgt ttgcaaaagg ttatttacgt
    14821 ttttatccgc accttgcaga agaaggagat attgactata acaaccctgg tatccgttta
    14881 ctgcatactc atattccggg aggctcacat tatggacaag atactcacga gcacggcaaa
    14941 ccttggattg atatgcactc caagcggtat gatattgatg gaagtttgca aaatccactt
    15001 cctggttttg aagaagccaa aatatcagct aactatgtag attactatca tgatgaaaaa
    15061 gatggaaaaa gagttgaaaa ttacttcaag aacaaaggaa aaaatctacg tttcgaattg
    15121 gttcacaaag agtggaaagg gctaaaagga gctattggtg tgcaatatac caaccaatct
    15181 acctcagcac ttgcacttga agcttcacga gctgcaaaag tatttaataa acagccttta
    15241 ctcaataatc caaaaacaaa attatggagt ctctttgcga ttgaacgcct taatttaggt
    15301 gactttacct ttgagttaag tgggcgggca gaacgtcaaa aaatagcaat ggattatgat
    15361 gtgaaattaa ttgatcgctg gctaggcttt aatacaccta tgccaaactt ggacccacat
    15421 aaagacaaag gttattctta tagctttgca actcattggt atttcgcacc aaaccataag
    15481 ttaacattaa atgctgcaca tcaagaacgt ttacctaatg ctcaggaact ctatgctcat
    15541 ggtaaacaca ttgctttaaa tgcatttgag gctggcaata aaaatctaaa aaaagagcgt
    15601 tctaaccaaa ttgagctatc attagcttat gttggcgaca aatgggatta taaattaaat
    15661 ctctaccaca cccgctatgg caactatatt tacccattaa ctcttaatga taatcgtgga
    15721 cctaaatctt ttaccgatga atataacttg aaagtgaata gatattatca aggcgaagct
    15781 cgttttagtg gggcagaagg cgaaattggt tatctattta caccaaatta tcgcttagcc
    15841 gtattcggag actatgtccg tggaaagtta gtcaacttac ctaatattgc aatgagttac
    15901 aacatttgga caggtgaagt tgacaaatgg gcttctcagc cagacatttc tgcacctcgt
    15961 ataccaccac tacgtttagg agcaagattt aatgctgact tcaacctaaa ctggtctgga
    16021 atgttagaat attaccgagt atttgctcag aaaaaagtct cgaaatacga acaagttacc
    16081 cctggccatc atcaagtaaa ccttggcgta acctatagta atcattttaa tcaaacagaa
    16141 taccaagtat tccttaaagt ggataacttg cttaatcaga aaatgtacca acatgcctca
    16201 tatctaccac atattccaca aatgggtaga aatgcaatgc ttggaatgaa tatcagtttt
    16261 taatttgtaa atctctacaa aaatataacc gcttgtaaat ttctatctac aagcggttac
    16321 tttcagtgga ttttttgcaa ttagagatcg tcaattacca agtaaatttt atttaccggg
    16381 ccgtgaacgc caactacttt aatcaactca atatccgcag tcgccgatgg gcctgagatg
    16441 atattcacac aagatggcat tctttcacct cgttgggctt tttcgtgcag aatttgtgca
    16501 agctgtgcca cacgaggtaa cactgtactt ttgcgtaaca caaccaccga tttttcgggc
    16561 aataagctca ctgaacgccc aaattcttta tcggaaaaca gtacaatacc gccagactct
    16621 gccaagccat attcaccgta aaccacaccg atattagcag ttctggcttt ttcaaagttg
    16681 gtttcagctt ggttgaaatc ccacacatag ctgtcttcgt attttgcttg aatggctgcg
    16741 gtaatcccaa gatcctttaa acgttgatcg ttattcacga tcacactcgc cccgccatat
    16801 ttttcacaaa tatcaataat ggcttgtggt aaatccgcct cttttgcctc tactacatct
    16861 gccatcatca ctcgggcaaa atcgataaac tcttggcaaa gttgtggttg agggcgatcg
    16921 gttaaacggg taatcgcgtg gttgttttcc aacacaggaa ttggctcagg cacattttgg
    16981 cgtggtctgc ccatacgctg tgccaattta tttaagaaat tttcacgatt ttgtaaatcc
    17041 attttcttat cctctgttat taaaccattc acggaaactt tcgccttcgg cagtcggtaa
    17101 atcacgggct ttcgtccatt cacctaacgc cccaaaattc accggtgctt tgccgttttt
    17161 aatcaatttg cttgccactt tcgcccccac ttttacgccg actttccaaa gggttgggtg
    17221 tgagttagcg aagttaaagc caaaaataga caagcgttct gccattggcg ttaagccggc
    17281 atccgcaatt ttctcacggt gttttaagat aagctgtgcc agtggaattt tcactggaca
    17341 aacactgtta caagcggtac aaagtgagca agcatacggc aattctttaa actcttcgta
    17401 gccaccgagc aatggcgaaa taactgaacc aatcgggccc ggatagattg aaccatagcc
    17461 gtgaccgcca atttggcgat acgccgggca agtgttcaaa catgcaccac agcggataca
    17521 acgcaacact tcttggaatt cgctttctaa gattttagaa cgaccgttat cgacaatgac
    17581 caagtggaac tcttccggac catcggtttc gccttcaagt ctaggacctg tcagccaagt
    17641 gttgtaagcg gtgagttttg cccctaccgc actgcgagcc agcatggtaa ttaatacatc
    17701 aacctcttta aaggttgggg cgatacgttc catacccatt actgcaatat gcgttttcgg
    17761 cacagttgtt gccatacgca gattaccttc gttggtcact aaacaaaccg agccggtttc
    17821 cggcaccgca aagttacagc ctgaaatacc gatgtctgcc tctaagaaat cttcacggat
    17881 tttttggcgg acgaatgcag tcatctcttc aggtgtttcc gaaccttgat aacctagcac
    17941 atcgtgcatt tcttggcgga ttctgtggcg atctttgtgg attgcaggta caacaatatg
    18001 agaaggttta tcgcccacaa tttgcaataa atattcgccc aaatcggttt caaccacttt
    18061 aatgccttct gcttctaaaa cgtggttcat cccaatctct tcggttacca tcgacttcga
    18121 ttttacgatt ttcttcgcat ttttagcttt cgccacgttt ttgatgtaat cagtggcttc
    18181 ttcggcggtt tcggcaaaga aaacgtgtcc gccgttttgg gtgacttttt cgcttaattg
    18241 gtagagataa gcgtctaaat tggctaaaac gtggttacga attgctttcg catcatcacg
    18301 ccactcttcc cagttgccca gctcatccac catacgctga cggtttgcac cgattgtttc
    18361 ctgagcctta actaaggctt tacgcacaat ctcgttatta acttgctgct caacacgttg
    18421 tttaaacggc agggtgttag tttgtaaata agacatctta ttttcctccc tgcattaaca
    18481 cttcggcaat gtgcatcact ttgattggct taccttcacg gcttaaacga ccgccaatgt
    18541 tcatcaagca gcttacatct gccccgatta aataatccgg ctcatcggta tctacatttg
    18601 cgactttctc ttttaccatc tcgccggaaa tttctgccat tttgaccgag aatgtgccac
    18661 caaaaccaca gcaagtttct tggtttttga ttggtaataa ctctaaccct ttaacgtgct
    18721 gtaataaagc aataggctca tctttaatcc ccagcttacg gaataagctg caagacgggt
    18781 gataaactgc tttgcccggt aaataagccc caacatcttt cacgcccagt ttgttcacaa
    18841 taaaatcggt taaatcatag aaacgatcag ccactttctt cgcacgttct gcccattctt
    18901 tttcgccaaa gcgttcaaaa tgatccggat aggttttgat cgcatataca caagaacctg
    18961 ccggggcgac aatcgggtaa tcattagctt caaaggtttc aaccaagttt ttcatacctg
    19021 ctaaagcttg cttagtgtaa ccgctgttga tcgcaggttg tccacagcaa ccttgttttt
    19081 ctaagaaagt gattttacaa cctaattttt ccaataaaag cacagtattt tttgcaaccc
    19141 ctgctttcat tacatctgca atgcaggtta cgtaaaaatt aacgttcata aagaactccc
    19201 acagtaaata taaataagaa ttaaactcaa aaaatgccgt tctaagacgg cgaaaggaag
    19261 aggtggattt gcaaaaaatt tgctaaatct caccgcttcc tttctaaatc aagtaagctg
    19321 attattaact cattataggt tatagaacat aggtactata aacaatgccg aaatcgcagc
    19381 aataacgcca tacacgaaca ttggcacggc tgttttctta ataatattgc cttcttgttt
    19441 ctcaatgccg gtaacagaac acacagccac gatgttgtta atacacacca tattccccat
    19501 tgcaccacca actgattgca atgcaagaat taaggtaaca gataacccga cttgctgtgc
    19561 cgttgcatat tgtactgttc cgaaggttaa gttagatacc gtatttgacc ctgagaagaa
    19621 cgcaccaatt gcacctaaga acgaggcaaa taatgtccaa gattgaccgg taaattctgc
    19681 gaagttttta ccaatgatct gaaccattga gtctacacca ccaattaaca ttaattttac
    19741 catcacaatg gcacctaaaa gtgctaagaa tggttttttc acttgtttaa atgaagtgcc
    19801 aaaaatctct tgagtatttt tacctgatac cgagaaaatc ggtaagcaaa ttaatacggt
    19861 cacaacaaat ggaatcaacg caggaacata cagtaattta tagctagttg ctacattcgt
    19921 acctaaaata tttttcagtg caaaaattaa gccttggcta atttcaaagt tagcgaaacc
    19981 aagcgaactg acaatccaag ctgttgcatc atttagcatt gcttttaatg gaagttgctg
    20041 aatacgggtg attaccaaaa tgaagatcag taaccctgtt ggtaataatg cttttgccac
    20101 ttcaccaaag gtcgctttat cgccgtcaag gtggttctcg cttttcgcta aaccaatacc
    20161 catatttgct acccagactg acaccaataa accaatcgcc ccggcaacta atgatgggaa
    20221 ttcgtagtta aattgagcaa taatgaagta aggaatgaca caggcaaaaa tgctgatata
    20281 aataaacacg atattttgac gaatttcttt ccagctcaca attaaacgca atgccataac
    20341 tggaataata aacgcagcaa tagagtggat cagtgcagta atagaaccaa tttcaagcac
    20401 ttgtgcatcg gttagtaaac catcttttaa taatggtccc ataccaaacc aagttggtgt
    20461 gccaaccgca ccaaatgaca ccggcacaga gttcattact aaggctaaca ttgccacttg
    20521 taacggttta aagcctaaac caaccagaat tggagctgca attgccgccg gcgtaccgaa
    20581 acctgatgcg ccttcaatca taaatgcaaa tgcccaaccg ataatcatca actgtgccac
    20641 cggattcggg ttaattgtcc ctaaccattt acgcatagtg ttggttgcac ctgaaacttc
    20701 agagaaacgg ttaaataaaa tcgccccgaa aataacggta attggggtta atacatcacc
    20761 taaaccggca ataatattgg caaagattaa cgtggtatca ttaccaaaat aggtaagctg
    20821 aagcacaaaa attaataacg ccgtaagtgg taaagccaca taagacggta acgcgttacg
    20881 ttttaccatt aaataaatga gcaaaacaat tggaaatacg ctcaggaata gagccatact
    20941 gcacctcttt atatgattat aaaatgacct aactggtcgg ataggtgcga attgtactct
    21001 taaaaaaaac taatgtaact aggttgttac aattttgtga tctagctcgc atttttaatg
    21061 attgtatggt taaaaaagag ccatatttat tttcatttaa tacttaatag ttagccctat
    21121 ttaagacatt tttaccgaat cgagcaatat gcaattaatt aacaaaaaaa ggccgcttgt
    21181 agatcacaga tcaacaagcg gtctttttta ggcaaaaatt tgcaaattaa acattgaaac
    21241 ggaagtgcat tacatcgccg tcttgaacaa tataatcttt accttccaaa cgccatttac
    21301 ccgcttcttt tgcaccggct tcacctttat tgtctatgaa gtcttggtaa gcaattactt
    21361 ccgcacgaat aaagcctttc tcaaagtcag tgtgaatcac ggctgctgct tttggagcgg
    21421 ttgcacctac cgaaaccgtc cacgcacgca cttcttttac ccctgcggta aagtaggttt
    21481 gtaagttaag taaacggtag cctgcacgaa taacacggtt taagcccggc tcttcaatgc
    21541 ctaaatcttg tagaaattcc actttttctt cgtcatcaag ctcggcaatt tccgattcaa
    21601 tcgctgcaca caccggtaca accaccgccc cttctttttc ggcaatttca cgcacacggt
    21661 caagataagg gttattttca aaaccgtctt cgttcacgtt ggcaatatac attgtcggtt
    21721 ttaaagttaa gaagttgtag cccttaatag cgtgcagttc atccttatct aaatctaccg
    21781 aacgaatcat accggcattt tcaagcacag gtaggatttt ttccataatc gataattcaa
    21841 attttgcgtc tttatcgcca cctttcgcac gtttttgtaa acgctgaatg gcacgctcgc
    21901 aactgtctaa atcggcaagt gccaattcgg tattgatgat ttcaatatca tcagctgggt
    21961 caattttccc cgcaacgtga acgatgtcat cattttcaaa acaacgcaca acgtggccaa
    22021 tcgcatcagt ttcacgaata ttggctaaga atttattacc taaaccttcg cctttgcttg
    22081 cacctgccac taagccggca atatccacaa attccattgt agttggtaac actcgctcag
    22141 gtttcacaat ttccgccaac gcatctaagc gagggtcagg cattggtacc acaccggtat
    22201 ttggctcaat cgtacagaac ggatagtttg ctgcctcaat acctgcttta gttaatgcat
    22261 tgaaaagggt cgatttaccg acatttggta aacccacaat accacattta aatcccattt
    22321 tttgttcctt agaattcccc tctccccttg cgggagaggg ataaatttga gcttcgttca
    22381 gaagcgaaaa tgagggagag ggcgaaattg caataatttc ctcaaatatg accgctcccc
    22441 tctctctgaa aaatacttct gaacgaagta tttttcggtc tctctcccac aagggagaga
    22501 gttttaattt gctttaaaac tatttaaacg gttagttgcc ttaaccattc cgtctttaaa
    22561 taaaacttct acgcaacgtg cggcttcatc aaccgcacta ttcagtaatg tctgatcgct
    22621 tggtgaaggc ttgcccagca cataattcgc cactaagtct ttatgccccg ggtgtccaat
    22681 accaattcgc acacggtaaa actctttatt attgccaagg gcggcaataa tatctttcaa
    22741 gccgttatga ccaccgtgtc cgccgccttt tttcaatttc accgaaccgg gtggtaaatc
    22801 caattcatcg tgagcgacca aaatttcttc cggtttaatc cgataaaaat tggctaacgc
    22861 tcccactgct ttaccactta aattcataaa agtagtcggc actaataaac ggacttcgcc
    22921 ttgagcggta ttaatttttg ctactttgcc aaaatatttc ggctcttctt ttaggctaac
    22981 gttatatatt cgggcaagtt cgttaatcag ccactcgcct gcattatggc gggtttcttc
    23041 atattttacc cccgggttcg ccagcccgac aattaattta atttctgaca caatcttgtc
    23101 tcaattcatt taatttaaaa ggcagtattt tagagaaaaa ccgctatttt ctcaaggcaa
    23161 ccattaatca tattgtctat acggatttgg tacgcattga tacttcgcta acatcgattc
    23221 agtgaaatcg gtgcgtgaag cagcgttatc attgtttaaa ctaaccacac caattcgctt
    23281 gcctctgcaa tcccctttag caataaaggc aagattataa cccgcctcac gggtataacc
    23341 tgtcttactc actaatgcct gataggattg ggaacgaacc atactgttgg tgtttttcat
    23401 agagaaataa cgaccacctg cataaacact cactaatggc gaattagaca attgctgaat
    23461 ttcaggctta cttgccgcat agcctgccaa tttagcaaga tcaaccaccg ttgaaacatt
    23521 atccgaagat aagcctgagc tatcaccaaa gtaggtttga gtcataccga tttcacgggc
    23581 tttgctgttc attcgagcca aaaattgggc tttattcaaa tgtgttgcgt gggcaagggc
    23641 gtgagcggca tagttatcgg agcgaactag catcgctttt aacaattcac tacaggcaat
    23701 gttaagattt ttcggcaatg ggctggtcgt gccttttaag aaatcagcat ctgacggcaa
    23761 aatttgggtt tggcaactcg ccccatagcg gttttcttct aagaaaacga ctgctgtcat
    23821 taattttgtg accgaagcaa tcgggcgaac taaattgaaa ttcttacctt ccaaaaattt
    23881 cttttggttt aagtcaaaca ccacataagc ggaattttcg gttggaatat aagcagcggt
    23941 tgctttaatc cgtggtgtgc ttttcctttt tgccggctgg gaggaacagg cgcttaacac
    24001 cagagccgca atcataacag gaataaattt tttcatcata atagattcat cgataataaa
    24061 gtcaaagctg gttattctac cctgtttcca aaattgtgcc aaagcaagcg gtcgattttt
    24121 acaaaatttt tgcaaatcta gccgattttg caaaatttcc gccaaattta accgcttgcc
    24181 ctctcgcctc aaatcagcga aaataacgct taattttttg gcggactttc cgcccttttt
    24241 attttaattg gttgagaaaa atgtcatacc cacaagaagt taataaacgt cgcacctttg
    24301 cgattatttc ccaccccgat gcgggtaaaa ccaccattac cgaaaaagta ttgctctacg
    24361 gaaatgcaat ccaaactgcc ggctcggtaa aaggcaaagg ctcggcacaa cacgctaaat
    24421 ccgactggat ggagatggaa aaacaacgtg gaatttcgat taccacctcc gtgatgcagt
    24481 tcccgtacaa tgattgcttg gtaaacttac tcgatacacc ggggcacgaa gacttctcgg
    24541 aagatactta tcgtactttg actgcggtag atagctgctt aatggttatc gactcggcaa
    24601 aaggggttga ggaacgcacc attaaattaa tggaagtgac ccgcttgcgt gatacgccaa
    24661 tcctaacctt tatgaacaag ctagaccgtg atattcgtga cccgatggag ctgttagatg
    24721 aagtggaaag cgtgctgaaa atcaaatgtg cgccgatcac ttggccgatt ggttgcggaa
    24781 aattgtttaa aggggtatat cacctttaca aggacgaaac ctacttatac caaaccggac
    24841 aaggtcatac cattcaagaa gtacgagtgg ttaaaggctt aaataatccg gaactggatc
    24901 aagccgttgg cgatgattta gcccagcagt tgcgtgatga attagagctg gtacaaggcg
    24961 cttcgcacga attcgatcac accgaattta tcaaaggcga gctgacaccg gttttctttg
    25021 gcactgcact gggtaacttc ggggtcaatc atttccttga cggtttaacc gaatgggcac
    25081 cggcaccaca agcccgtcaa tcggacgaac gtgaagtttc accaagcgag gaaaaattca
    25141 gcggtttcgt atttaaaatt caagcgaata tggatccgaa acaccgagat cgagttgctt
    25201 ttatgcgtgt cgtttcaggt aaatatgaaa aaggaatgaa gcttaaacac gtccgtatcg
    25261 gcaaagatgt ggtgatctcc gatgccttaa cctttatggc gggcgaccgt tcacaagccg
    25321 aagaagccta cgccggcgat attatcggct tgcacaatca cggcacgatc caaattggtg
    25381 atactttcac ccaaggcgaa aatttcaaat tcaccggtat tccgaacttc gcccctgagc
    25441 tgttccgccg aatccgcctg cgtgatccgc tcaaacagaa acaactgctc aaaggcttgg
    25501 tacaactttc cgaagagggt gcggtgcaag tattccgtcc gttaatcaac aacgatttga
    25561 tcgtgggagc ggttggggtg ctacagtttg atgtggtggt ttcacggctg aaaaccgaat
    25621 acggtgtaga ggcaatttat gaaaccgtaa acgttgccac agcccgttgg gtcgaaggca
    25681 aagatgccaa aaaatttgaa gagttcaaac gcaaaaacga ggcaaacctt gccctagacg
    25741 gcggagacaa cctcacctac attgctccga caatggtgaa cttaaacctc gcccaagaac
    25801 gttaccctga cgtacagttc tttaaaacga gagagcacta aaaccaatag gggcgaaaaa
    25861 tctttcgccc ctacaaataa agcacaagcg gtcaattttt tttccgaatt ttacaatact
    25921 aggcattctg ttcctcaaat agcctaaata ttcccctatc aacaatcctt atcttgagat
    25981 tattctgcct attaattaac cactcaaaaa taccctcgca gaaaactcta ctttttttat
    26041 ggaaatatgc taaagttcgc caatattcat agccctgatt tttttatgga gaaaataaaa
    26101 tgaaaaaatg gttgattcca ttaactgtcg cagcgttctg tgtttctgct tgcgatgata
    26161 agaacagcac tcaagcaacc gcagaaaaac cgcaagtaga gaatactcaa tcgcaaaaaa
    26221 atgcggaaat attaccgctt gcaaccgtgg ttgccccatg ggaaatcaat agccttgacc
    26281 cgaatcaatc aggcgtaatt ttccagcgta tgaacttagc ggaaacattg gtcgaagccg
    26341 atcttaacgg gaatttaatt ccggcattgg ccactgactg gcgcagtaac gaagagggaa
    26401 caatctggcg ttttaccttg cgtgaagggg taaaattcca taacgatcaa gtacttaccg
    26461 cacaagcagt ggtaaatagt ttgaatatcg caaaaagcaa accgggtgtg ttagcaaaag
    26521 cctttatcaa ggaaattcga gcggtagata acaaagtgga aattgagcta actaaagctt
    26581 ttgtgccgtt tcctcccttt ttaacacact acaccgcctt aattttggca cctgaaagct
    26641 ataatgaaaa aggcgaagtg acccaaatta tcggtacagg tgcgtttaaa cccacaaaaa
    26701 ttgaagctcc gcagaaattg gaagcggtgc aatttgaggg ctattggggc aaaaaaccgc
    26761 aagttcagca agccaattat ttagccagca gccgtagcga aacccgtatg ttaatggcac
    26821 aaagcgagcc gtcatcactg gtatttaatt tagataccgc cagtgtagca aggctgaaag
    26881 ccgatcctaa cctgcaatta gtcagcggat ctattgcccg tactattcag ttgaaaatgg
    26941 acgtggcaaa gccgtttttt aacgacttag cgattcgcca agccttatcg caagcgatta
    27001 atcgcaaggc gattgctgag caggtcttaa aaattgagaa cggagctgcc gatcaaattt
    27061 taccgaaagc ctttgccgac tggcgtgttg ataccgcaga acaagtggtc gatattgcaa
    27121 aaattaaaca aaatctgacc gcttccggct atacctttga tgaacaaggt cgcttaacca
    27181 aagacggcaa accgtttagc tttaccatgc gcaccttctc agatcgtcct gaattaccgg
    27241 tgattgctac tatcttacaa gctcaatgga aacaaattgg cgtggaagtg aatgtttcgg
    27301 tgggtaattt cagcgaaatt ccggcggggc atcaagacgg cagtttagaa atggctcttt
    27361 atgccttaaa ttatggcaaa accttagatc catatggcgt aattgcctcc gacttcgcca
    27421 atggtggcag tgattggggg gtaatgaatt ggcaaaatac tgaggtagac aatgcagtca
    27481 aatcgctcga aaccgagcgt gacccgcaaa aagcgaaagc attaaagcaa acggttagca
    27541 aaattattta caatgatttg ccaatcattc cggtggttta ttaccaacaa aatgtggtgg
    27601 cacataaaga agtaaaaaat gtgacgctag atccatttga aagacgcttc tttttggagt
    27661 tattaagtaa gtagtttaat tcaaaatact cctcgcttta gaaaagggaa ggtaggattt
    27721 ttcagtagta atttgcgctc ttaggtgaat aaatagtgac agaattatcg ttttttctca
    27781 tttttcacct attttctccg cttatttctt ctgccaaatc ttcccttccc ctctttgcta
    27841 aagaggggga tcagaacgca taaaatcatc tttttaataa atgaaataat acaatgcaca
    27901 aaattctctt ccgccgtctt atccaaattc tactggtgat ttggtcggtt ggcacactca
    27961 catttatcct cacccgccaa ctttcgggtg atatggcata ccgcattgct gccagccgct
    28021 atggttatga tcaagcagat agtgctgctg ctgaggctgt gcgtgccgag ctgggattag
    28081 accaaccttg gtggcaaagc tacttcagct ggctaagtga cttggctcaa tttaatttag
    28141 gcaaatcatt ggtgaccggt gatccggtct ggtctgaaat tcagcaccaa ttcgggcata
    28201 ccttaagcct tgcgattgtg gcacttatct tagcaatcct tatcgggcct ccgctcggtt
    28261 tgttagccgc ccgtaagcca aacggctttt ttgaccgctt gacactggta ttcagtaccc
    28321 tgtttcgctc cgtgccggca tttattattg cgattggctt gattacgctg ttttccgctc
    28381 aactaaaatg gctacctgcc ggcggatacg gctgttggca acattttatc ttgcctgcct
    28441 taacgcttgc gattggcttg agtacggttt cggtacgagt cacccgttct gcaatggttc
    28501 aggtaaaagg ctcagaattt taccaatttt cacaattaaa aggcttaagc cgttggcata
    28561 cctttttacg tcacggtttg ccgaatattg ccgtgccggt cattgcctac cacgcagtac
    28621 aattagttta tttaattgaa ggcgttgtgg tggtcgaaag cctatttgct tggcccggca
    28681 gcggacacgc actggttcac gccatcattg cccgtgatgt gccgatgatt caaggtacaa
    28741 cgctcgtgat gggcggattg tttgttgtat taaacaccat tgccgatcta ttaagtgctt
    28801 ggattgaccc acgaattaag cgataggaca tcaagatgaa aatttcaatt tcacaatatt
    28861 taggcggcac tattctcctt gcaatgttgg gatttgcctt tttacagcct tatttttacc
    28921 cgatggatat tggctttcaa gatttaacca atatcctttc caatccaaat gaaatcgctt
    28981 ggttcggcac cgatcatctc gggcgggata tgcttgcccg tcttgcctct gctattcgtc
    29041 tttcgtttgg cttatcactg tttagcgtga tttgtgcctt aattgcaggc ttaattaccg
    29101 gcattatggc aggctttttc ggtggctgga ttgaccgcat tttcagcttt atttgtgatc
    29161 tagtgatggc actccccggc ttacttttag tattgctctt tgccgccctt tctcccggct
    29221 cattttggac gctctattta gggatttcat tggtaatgtg ggtggaattt ttccgtgtga
    29281 tccgctctat cagttcaaca atggcaaaca gctcggaaat tcaagcctca cgcctaatgg
    29341 gaatgggctg gttttatagc ttcaaacgcc acttattgcc ccgtttatta ccgatgattg
    29401 ccactttatc ggcattctcg ctcggcaatg cgattttagc tctcgccaca cttggctttg
    29461 tcagcgtagg gcttcgcccg cctacagcag aattaggctt gatgatgacc gaactattcc
    29521 cttactacta cgaagcaccg ctgatatttt tgcaaccagt ggttgccgtt ttcttaatgg
    29581 tactcagctt acaattattg tctagaaaaa ttaaataatg cgtaggggca ggtcctgtgc
    29641 ctgcccaaaa ttcttattat atttatgggc gggcacaggg cccgccccta cagtaataaa
    29701 atgaagatga aattactcga tatccaaaac ctatctgttg aaaccgaaaa cagattacag
    29761 ctggtcgaac cgattagcct acaattaaag gcaggaaaaa atattactat cttaggcgaa
    29821 accggctcag gcaaaagcct gctgattcaa gcgattatgg gggcgttacc cgacggctta
    29881 atcgcaagcg gtgaaatttc ggtaaaaaat tgcaaaattt ccaccgaatc cgaccgcttg
    29941 caaacattgt ggggtaaaac cttggtaatg ctgccacaag agcctcgccg ctcgcttaat
    30001 ccgattatgg caatcggcaa gcagttgtgg gaaagttttc actatgtggc aggcaaacca
    30061 tcatctcaag ccaaaacgga aagcaaagcc tatttagcca aacttgggct gggcgaatcg
    30121 gttgaaaact acccacacca gctttccggt ggaatggctc aacgtgcctc ttttgcgatt
    30181 gcaactgccg ccggtggcaa aattttactt gccgatgagc cgaccaaagg gcttgaccca
    30241 atcagtaaag gcaaagtgat tgaactgtta aaatccgcct accaaaacgg tggaggcttg
    30301 ctcaccatta ctcacgatat tgaagttgcc gagcaactcg gtggcactat tttagtgatg
    30361 aaaaaaggcg aactgttgga gcaaggtgag gcaaaagcgt tgttaaataa cccacaacac
    30421 ccttacacca aagcacttat cagtgccgat ccaaaacatt ggcaaccatt gcaagatctg
    30481 caaaatttaa gccaaaaaca accgcttgtt tcggttaaaa atttgagtat tgcccgtggt
    30541 aagaaaacgc tgtttagcaa cctttccttt gacttacaca aaggcgaagt gcttgggatt
    30601 gtcgggcata gtgggattgg caaaagctcg cttgccgatg tactttgtgg tttgcttaag
    30661 ccgaaatcgg gcgaggttgt gtggcacagc cacagccata aaaaacacca agtgttgaag
    30721 ctttaccaag acccaccgga agcctttgct ccgaatgtca gtctaaaaac cttgcttgat
    30781 gatgtgatta acaagcacca attagatcga ctgccgattc caagtttact gcaacaactt
    30841 tcgctcaacc cagaaatttt gcaacgcaat gcggaaaatg tctccggcgg cgagctacaa
    30901 cgagtagcaa ttttgcgagc cttgctctta gaaccggtac tactgtttgc cgatgaagtc
    30961 acttctcggc ttgacccaat cacacaacaa gaaacgatag aattgctgat caaccagtgc
    31021 cgagcgagaa attgcagtct gattttggtc agtcacgatc cttatctaat tgagaaatcg
    31081 tgcgataaag tgattaattt ggaagagtat gtgggctaac aagcggttca atttctgaga
    31141 ttttttgcgg ctctaaaaac aaaaatgcga agacatcagt tcttcgcatt tttcttactt
    31201 attccttatt gcccagccag cttctgccgt acaatttcaa acagacagac cccggttgca
    31261 actgagacat tcaaagaaga tactgagccc gccattggaa tgctgataag ctggtcgcaa
    31321 tgctcacggg taaggcgacg cattccgtcg ccttctgccc ccataactaa cgcaatcgag
    31381 ccggttaatt ttgcttcata aatgcccgat tccgcctcac ctgccgtgcc gacaatccag
    31441 acattatgcc gttcttgtaa atctcgcatt gtgcgagcca gattggtaac tcgaatcagt
    31501 ggcatcactt ccgctgcccc acaggcgact ttgcgagcgg ttggtgtaag ctgagcagat
    31561 ttatctttcg gcacaataac cgcatcaacc cctgccgcat cagcggtacg caaacaagcc
    31621 cctaggttgt gagggtcggt cacgccatct aaaatcaaca agagtggatt tttcttttgg
    31681 cttaagatcg cctctaaatc gtgttcattc agctcttttt gtggcacgac tctggcaata
    31741 atcccttgat gcacttcacc ttgcgatttg ttatctaagg tttggcggtt cacttgttga
    31801 attgccaccc ctaaacgttg taattcattt aatagtggca ttaagcgttt atcttcacgc
    31861 ccttttagca ccagcacttc aattaaacgc tcaggtgcat tatccaaaaa ggctttcact
    31921 gcgtgaatgc cataaatttg ttcgctcata ttttatcctt aataattggg cgaacccatc
    31981 agctcgccca tataaatacc taactaaagc aacatcttca caattttatc caacttaacc
    32041 ctgccgaatt ttttcagcaa tttacgcaca ttttcagggt aatcggttaa aacttccaaa
    32101 tcactgtagt gagttaaaat ctgcgtatgt tggcaaattt ggtttaactc cgtttctgct
    32161 ttttcactta attgatgttg aggatcggaa attaaaattg cattttcggc atctaaccgc
    32221 cacgctcttg ggttaaggtt attgccggtc agcaaaatat agcggttatc cacccaaacc
    32281 ccttttaagt ggtagctgtt ttcgccatct ttccataagc gaatggttaa ctgtttattt
    32341 tgtacataac cgtccaaccg ttttgcaaag gctcgtaagt tcttttcata caaataaggc
    32401 agagccgatg ccatcgtgaa tttttcgtcc ggcttggtgt agaaatcatt agcggtttta
    32461 tcccccacaa taatttcaac cgatttgccg tttgccaata gccattcaat acgggttctc
    32521 agagaatgcg gaaaattaaa atacggagtg caaatcgtta atttctgctc agtttgataa
    32581 aacaacgctt caatcacttt atttaactga ttcttacgtc gccctaagcc tactaaagga
    32641 gaaaccgcta agcgaccatt ttcagcaaca ccgttaaata aatacgcttc ccgacttaat
    32701 tgtttgcgga aatgcttaat ttgcgcacga atttcagccg ttttcgggcg attttccgta
    32761 tctaaacgtt ttaccgcttc attggttaaa agatgctgtt gaataaacgt cacccagcta
    32821 tcggcaagaa ctttattttc aatgacgtgg taacggtcat aacggtaacg ttcaaattga
    32881 tgcaaataca cattattaat gcttgctccg ctatacaaaa tcgtatcgtc aaatacgaag
    32941 cctttcaaat gcaatacacc aaacacttct cgtccgttaa tcgacacacc gtaaaaggca
    33001 atctcttgcc ctgccggtaa accttgttcg tatttaactt ttgcatacca gtcggcgtta
    33061 gataaattct ctgcctcacc aatacgccca cgttgggctc ggtgccaatc aaccaaaatg
    33121 ttaatttcca gttcaggatt atttcgcttc gcttgatata aagcagctaa tacttcctgc
    33181 ccggcttcat ctttttcaaa gtaaagagcg gttatataaa tacgcttttt tgccgtttga
    33241 atcagctgta aaatttgttg tttaaacgct ttgctcgagg cgagaaactg aacctgctct
    33301 gccacttgtg gtaagtatgg caggcttttc aataggtatt cagctttacg ttgtttgttc
    33361 aaaattaaca tcattgattc caaaattttc aatcgttgcc tgctatttta cactgaaatc
    33421 gccaataaag cgattttcgc ttaacggcat tgatagctgg tcaaacgatt aggatcttct
    33481 ccggtttgat aaattgcgac tttcggataa gcacaaagcg ggatctgctt ggctttatta
    33541 gggtaaagct caccggcttt ggcggcaata ctttccggct ccagtccttt ctcaacccaa
    33601 ttttcaaggg cagtgagcat atcaaaatca ttcaccgttg cccctcgccc acaatggttc
    33661 attgccgaca cgaaaaacaa ttttgcaaaa tgttgcggat tttcgaccgc ttgttgtagg
    33721 ctttgatacc aatttttgag atcaactgcc gaaaaaatcg ggtctgaaac gccttgataa
    33781 atcagcattt tgccaccgtt ctgcttaaaa gcggataaat caacttgatc tgtatcgtga
    33841 atgctcccta ccgctttcac ttgttcgctg gcttgatcca aatctacgct gagtggatca
    33901 cggctcggca ctctgggggc taaatagtaa tgggtcaaac ttttcaatcc cattttaaaa
    33961 ctaatgctgt tgggctgagc ggtttggcta tcacctaatt tccaatcccg ccagccttta
    34021 gcgttaatgc cggaatcata cgcccaaggg ctataaatca gctcgcctcg actgtttttc
    34081 gccccctcga aaatcgtttt gattaaagcg acttttttct gccccagttg ctttgccacc
    34141 atttccggct ggaaatcaca ctgttcccac gcattaatta aaccgtctgc taagccgtct
    34201 aacttatcgc aacgtgttaa tacgccattg gcaatcacat ctaaatcttg ttgagtgagg
    34261 gcttgggata aaattttgtc gccatcacca ttcttcggag caactgccaa caaggctcga
    34321 ttatcccata cttccgccaa gactgaacgg gaaacccgaa agccggggct gcctgcaatc
    34381 acaccgtcaa attcctgtgg ataacgcatt gccgccatca tcgcctcacg accaccattc
    34441 gagcagccca taatgtaatt gtgcttgctc ggttttcggt aaaattcggc aatcaactgc
    34501 ttggcaaccg tggtcacttt gccgatagag gcataggcat aatttgagcg agcttcggga
    34561 tctgcggtaa acactaaatc tcgagtggcg tgaccactgt cgttactcac tactgcatag
    34621 cctctgttta agccatttgc accactcgcc ccgtgcggat agagcttacc aatggcaggg
    34681 aaaatcaccc cacctacacc gcccgccccc tgaaataaga atttttcatt ccattgttcg
    34741 ggtaaacgta gctcaaattg aataccgtaa ggaacattat ccacctccac ccgttttcca
    34801 atttcacctt gtactaaaca gtaagccggc aactcagcag atttctcaac ccattcagct
    34861 ttataaatag ccgttttttc cggcgagtta gattttaacg cgacacattg ttcagccata
    34921 gaattagcca aagcagtgtg agaaaaaacg gagagaaaaa taaaaagaaa agcgattatt
    34981 ttcatcattt acatcaatac aagcggttat ttttccgaaa atttttgcaa attttaaact
    35041 gagtgtctat ctatcgctgg aaaagctaag gcagagtttc ctctgcctta gaaagatgaa
    35101 ttgaattaca ttttaagcaa acaagcgttt ttcgccttcg ccggctacgt tttccacaca
    35161 acgtccgcaa acttcttcgt ggccagagtg cgagccgatg tcggtagcat aatgccagca
    35221 acgagggcat ttctcaccat ctgcattttc cacttttact gcgagtccgg ctaattcgcc
    35281 ttccgcaata tctgcttccg ccagtggttt aacaatcgct tgtgaggtaa tcagcacaaa
    35341 gcgtaattca ttgccaagtt gttctaataa cgggcgaatt tcatcattgg cgaataccgt
    35401 caccttggct tctaagccag caccaattac tttgtcttta cgggcttgtt ccagcacacg
    35461 gttgacttcc gcacgcactt ttaagatttg ttgccagtaa gcatcatcta atttatcttg
    35521 ctcggttaaa ccgaataatc cggtgtagaa ttcttcggta aagacaaatt cacttctgcc
    35581 ttccacctgc ggtaagtagc cccaaatttc atcggctgtg aaggataaaa tcggtgcaat
    35641 ccaacgtact aacgcttctg caatatgcca taacgctgtt tggcagctac ggcgggcaag
    35701 gctgtcggct ttggtggtgt attggcggtc tttgataata tctaagtaga aagaccccat
    35761 ttcaatcgag cagaaacgca ttaaacgctg tactaccgtg tggaattggt agttatcata
    35821 ggcttctttg atgtcgtttt gagcctctaa agcacaagcc accgcccagc ggtctaaggc
    35881 gatcatctct tgcggttgaa ctaaatcact ttttggatcg aaaccgttca agttcgccaa
    35941 taagaaacgg gctgtgttac gaatacggcg gtatgattcc ccggcactgt ttaaaatatt
    36001 gtgcgaaacg gtaatctcac cggtatagtc ggtggaggca acccataagc gtaaaatatc
    36061 tgcaccgttt ttgttccaca cttcacttgg cacaattacg ttgccaagcg atttggacat
    36121 ttttctgcct ttctcatcta cggtaaaacc gtgagttagc acttgtttgt atggtgcttt
    36181 gccgttagta gcagtggaaa gcattaaaga tgacataaac caaccacgat gttggtctga
    36241 accttctaaa tacatatccg ctgaattgcc gttaaattca gggcgttgtt ctacaacaga
    36301 ggcataggtc gatcctgaat caaaccacac gtctaaggta tccggcactt tgcggtaatc
    36361 tttggcttct tcaccgagca attccgcagg atctaaatcc caccacgctt gaatgccttt
    36421 ttcttctaca cgtttcgcca cttcttcaat taattctaaa gtgcgaggat gtaattcttc
    36481 ggtttcatta tgcacaaaca tcgccattgg cacgccccaa gtacgttggc gtgaaataca
    36541 ccagtctggg cggtttgcca ccatcgtatc aatacgagct tcaccccagc ttgggatcca
    36601 acgcaccgat ttgatttctc ctagtgcttg ctggcgtaag ccttgggttt ccattccgat
    36661 aaaccattgt ggggtagcac ggaagataat cggggttttg tgtctccaac agtgcggata
    36721 actatgcttg atgcgggata attttaataa tgctcccact tcttgtaatt tttcgactac
    36781 tttatcgttg gattcaaaca cacctaagcc ggcaaagaac ggggtgtctg ctttgaattt
    36841 accgtcattg gaaattagcc ctgccatttc aatgttatat ttgcgagcga ccacgaagtc
    36901 gtccgcaccg tgatccggtg cagtatgcac taaccctgta ccaccgtctg tggtaacgtg
    36961 gtcgccaaaa ataaatggca cgctgtaatc atagaatggg tggttaaagc gtaataattc
    37021 taagttttcg cctttggtgg ttgctaaaat ctcagcagat tcaacgcctg ctgcttttgc
    37081 aacatcttcg actaaatcga ccgctagtaa cacacgctca tcacctaatt ggactaaggc
    37141 atagtctaat tcagggttga tcgcaatcgc acggttagac ggaatagtcc aaggggtagt
    37201 tgtccaaata accgcagata atgcccctct acctttaccc tgtgcgttga atttttcttc
    37261 taccgcattt acgtccacag cattaaaacg cacataaata gagggagaaa ctttatcttc
    37321 atattccact tcagcttccg ctaacgaaga tccacaatct aagcaccaat gtaccggttt
    37381 tgaacctttg tataaatgcc cgttcgcaat cactttgccg agcgtgcgaa taatattcgc
    37441 ctcagtgtta aaattcattg ttaggtatgg gttatcccaa tcacctaaaa tacccatacg
    37501 gataaaatcg gctttctgac cttctacttg ttctttcgca tagtcacggc acgcttggcg
    37561 aaactcggca gccgaaattt tctcatttgg tttaccaaca atcccttcta ctttcagctc
    37621 aatcggcaaa ccgtgacagt cccagcccgg cacataaggg gtatcgaaac ctaatgcggt
    37681 tttcgatttc aaaatcatat cttttaaaat tttattcact gcgtgaccta agtgaatatt
    37741 accgttagca tacggaggac catcatgcaa aataaaggtt ttcttgcctt tcgaggcagt
    37801 acgaattttt tggtataaat ttttgtcata ccaatttttt aacatatcgg gttcacgttt
    37861 cgcgagatcc ccacgcatag gaaagcctgt ttcaggcaag tttaaggtgt ttttgtagtc
    37921 aatagtcatt tttttatttc tcgttaaaat tatctgtttt atgcctagca cggcatagcc
    37981 gtactaggtt aagcatagct cagcccctct ggggctggaa actagaaagg ctcaccttgc
    38041 aaattcctta aaaaattcaa ccgcttgcaa gcgatctttc tcaatctggg cttttagtgc
    38101 ttcaaagtcg ggaaatttta tttcattgcg taattttttt aaaaagatca cttcaatcgc
    38161 ctcaccgtaa atagaggcat tgaaatcaaa aatatgcact tctaataacg gcttagtacc
    38221 gttaatggtc gggcggttgc cgacattggc gattccgtta aaactgccct gtttggtctt
    38281 cacttttacc gcaaataccc cttgaatcgg cgtaaccaaa cgattgagca taatatttgc
    38341 ggtaggaaaa ccaatggttc tgccgagttt attaccgtgt gcaacgcgtc ccagaatcga
    38401 ataaggcttg ccgagtaatt tctctgccaa atctaactca ttgttttgta aggcttctcg
    38461 cactaatgag ctgctaattc tttcttcgtt taagctatgg gtatggcttt cttccaccgc
    38521 aaagcgatat tttaagccgg cattgcgtaa agtttcaaaa ctgcccgccc gttttgcccc
    38581 aaagcgaaaa tcatcgccta cacttaaata gcgtactttc agtcttttag cgagcaaatc
    38641 gctgatgaaa tcgtctgccg aaatttgagc aaatttttca ctaaaacgca cgcatagcac
    38701 aaaatccaca ccggcttctt ccaaatattt tagcttatct cgcaggcgca ttaagcgggc
    38761 gggcgggtta caagcggttg aatttccact tttttttgca aaaaactctc gaggttgtgg
    38821 ctcaaataac atcacaactg agggcaatcc taaatctaaa gctctatcac aaagacgagc
    38881 caaaatattt tgatgcccaa gatgcacacc atcgaaattc ccgatagaga gaacacagcc
    38941 ttgatttaaa gcgatgtgtt tgtctaagtt gtggaaacct cgaataagtt gcataaaaga
    39001 taaaccattt tataagtgaa aattgctgtg attataacga gaaatctaca aaaaaggaaa
    39061 aaaattcaat ctgttatatt tttttagtgc tgaaagtggt
//
LOCUS       DANLXD010000008        37763 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.008, whole genome shotgun sequence.
ACCESSION   DANLXD010000008 DANLXD010000000
VERSION     DANLXD010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 37763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37763
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.008"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            391..1749
                     /locus_tag="PXD18_000325"
     CDS             391..1749
                     /locus_tag="PXD18_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HDL6300793.1"
                     /translation="MITIKKGLDLPIAGKPEQVIHNGNTVTEVAMLGEEYVGMRPSMK
                     VREGDVVKKGQVLFEDKKNPGVVFTAPASGTVTAINRGEKRVLQSVVIKVEGDEQITF
                     ARYEASQLASLTSEQVKQNLVESGLWTAFRTRPFSKVPALDAEPSSIFVNAMDTNPLA
                     ANPEVIIAEHQQAFFDGLTVLSRLFESKKVIHLCGSADSNILNAAQSRQINNVETNRF
                     KGPHPAGLSGTHIHFIDPVGATKQVWYLNYQDVIAIGKLFTTGELFTDRVVALAGPQV
                     KNPRLVRTRLGANLSQLTANELNAGENRVISGSVLSGAIATGVHDYLGRYALQVSALL
                     EGREKAFFGMIAPYSDKYSITRTTLGHFAKKLFNFTTAVHGSERAMVPTGAYERVMPL
                     DIIPTLLLRDLAAGDTDSAQALGCLELDEEDLALCTFVCSGKNNWGPLLRQALDKIEK
                     DG"
     gene            1752..2987
                     /locus_tag="PXD18_000326"
     CDS             1752..2987
                     /locus_tag="PXD18_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HDL6300794.1"
                     /translation="MGLKNLFEKMEPAFHKGGKYEKWYTLFEAAYTIFYTPGTVTRKD
                     AHVRDAIDSKRMMLIVWLALFPAMFYGMYNVGAQGILAALKMGTLTDLVANNWHYSLA
                     DSLGSVADAGWGTKMLLGATYFLPIYLTVFAVGGFWEVVFAMVRKHEINEGFFVTSIL
                     LALIVPPTLPLWQAALATTFGVVVAKEVFGGVGKNFMNPALAGRAFLFFAYPGQISGD
                     AVWVAADGFSGATALSQWAVGGQGALQHVATGETITWMDAFLGNIPGSIGETSTLMLI
                     IGAAIIVFARIASWRIIAGVMIGMAATATLFNVIGSDTNPLFSMPWHWHLVLGGFAIG
                     MFFMATDPVSAAFTNKGKWAYGILIGFMCVLIRVVNPAYPEGMMLAILFANLFAPIFD
                     YLVVQGNIKRRLARVANNG"
     gene            2980..3753
                     /locus_tag="PXD18_000327"
     CDS             2980..3753
                     /locus_tag="PXD18_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HDL6300795.1"
                     /translation="MAKFNKDSVGGTLTVVVLLSLICSLIVAGAAVMLKPTQDIQKQL
                     DKQKNILQAAGLLQKDTNVQETYTKFIEPKIVDLATGDYVEGVTGFDARAAAKDPAQN
                     VVIAPEDDKANIKTRAKYAEVYLVKDESGKTTQVVLPMHGNGLWSIMYGFVAVQPDAN
                     TVNGITYYEQGETAGLGGEIANPNWQKNFVGKKLYNEQNQVALRVGKGVSADKDHGVD
                     GLSGATLTSNGVDGSFKYWFGQNGFGPYLAKFKAAAGAN"
     gene            3753..4379
                     /locus_tag="PXD18_000328"
     CDS             3753..4379
                     /locus_tag="PXD18_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005717817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HDL6300796.1"
                     /translation="MADNNNLKKLLLSPIVDNNPIALQILGICSALAVTTQLQTAVVM
                     AIAVSLVTAFSSMFISMIRNYIPNSIRIIVQMAIIASLVILVDQILRAYAYDLSKQLS
                     VFVGLIITNCIVMGRAEAFAMKSGPVESFVDGIGNGLGYGAMLIIVAFLRELIGSGKI
                     FGITILETVQNGGWYQANGLFLLAPSAFFIIGFVIWAIRTWKPEQVEK"
     gene            4381..4977
                     /gene="nqrE"
                     /locus_tag="PXD18_000329"
     CDS             4381..4977
                     /gene="nqrE"
                     /locus_tag="PXD18_000329"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005529392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HDL6300797.1"
                     /translation="MEHLLSIFVKSIFIENMALSFFLGMCTFLAVSKKVSTAFGLGIA
                     VIVVLGIAVPANQLVYTHVLKEGALVEGVDLSFLNFITFIGVIAALVQILEMILDKFF
                     PALYSALGIFLPLITVNCAIFGGVSFMVQREYNFVESVVYGVGAGTGWMLAIVALAGL
                     TEKMKYSDVPAGLRGLGITFITVGLMALGFMSFSGIQL"
     gene            4988..6217
                     /gene="nqrF"
                     /locus_tag="PXD18_000330"
     CDS             4988..6217
                     /gene="nqrF"
                     /locus_tag="PXD18_000330"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HDL6300798.1"
                     /translation="MDSNFIFGIIAFTALVLVLAVIILFAKSKLVDSGDITISINNDP
                     EKGITLPAGGKLLGALASKGIFVSSACGGGGSCGQCKVQVKSGGGEILPTELSHISKK
                     EAKEGWRLACQVNVKSSMDVELPEEIFGVKKWECTVISNDNKATFIKELKLQIPEGEE
                     VPFRAGGYIQIEAEPHTVHYKDFDIPKEYHEDWDKFDLWRYTSKVDEHIIRAYSMASY
                     PEEKGIIMLNVRIATPPPRNPDVPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAE
                     MVFIGGGAGMAPMRSHIFDQLKRLKSKRKMSFWYGARSEREMFYVEDFDGLQAENDNF
                     KWYVALSDPLPGDREDYFRGFIHNVLYENYLKNHEAPEDCEYYMCGPPVMNAAVIGML
                     KSLGVEDENILLDDFGG"
     gene            6329..6763
                     /locus_tag="PXD18_000331"
     CDS             6329..6763
                     /locus_tag="PXD18_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase substrate binding
                     protein"
                     /protein_id="HDL6300799.1"
                     /translation="MEQLDITVLENAFNSLEKTIVSLENQAWFNRQEAIIQDTLIAGA
                     IQKFEFVYELSIKMLKRQLKNIESNDTDIDSTEFRDILRMAAQYGLIESPEVWLDYRK
                     MRNITSHTYDQNKAQQVYNGISNFLESTYFLVKQLQKRNSYD"
     gene            6756..7049
                     /locus_tag="PXD18_000332"
     CDS             6756..7049
                     /locus_tag="PXD18_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HDL6300800.1"
                     /translation="MIDLTESQRQQVLDIFKKYLPDTPVWVFGSRIKGTAKAYSDLDL
                     ALITKQPLTIRQQTELELAFTDSDLPFTVDLIDWASCNESFKQIILQRYEVLI"
     gene            7098..8132
                     /locus_tag="PXD18_000333"
     CDS             7098..8132
                     /locus_tag="PXD18_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HDL6300801.1"
                     /translation="MKKFFLLLIAFFTLSACEKAPEQITLSGKTMGTTYTVKYIDNGE
                     VENLISPEKMKNELDGLLIEVNNQMSTYQQDSEISRFNQAKQANQAVEISQDFAKVVQ
                     EAIRLNKVTEGALDVTVGPLVNLWGFGPDKRLNKVPSDEQIAERSAYVGIDKILLEMS
                     SKPKLTKSAANLYLDLSSIAKGFGVDKLAEHLETIGVSNYLVEIGGELRGKGKNLQGL
                     DWRIAIEKPVMTQGQAAQITVPLHNLAMATSGNYRNYFEDEKGNRLSHIIDPKQLRPV
                     NHNLASITVFAPTTMTADGLSTGLFVLGAEKALAVAEREKLAIFLIVKNGDKFETQMS
                     SEFSKLIQSQ"
     gene            8145..8390
                     /gene="nqrM"
                     /locus_tag="PXD18_000334"
     CDS             8145..8390
                     /gene="nqrM"
                     /locus_tag="PXD18_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HDL6300802.1"
                     /translation="METVLLTFGFFVAVIFAMSIGFIVKGKTIKGSCGGITALGMKKM
                     CDCEEPCDNLKSKIADGTADPEEVARFNKEPQFYEVK"
     gene            8392..8808
                     /locus_tag="PXD18_000335"
     CDS             8392..8808
                     /locus_tag="PXD18_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase substrate binding
                     protein"
                     /protein_id="HDL6300803.1"
                     /translation="MNRDIRWKQRFDNYKKSVSYLQAEAEKYADTDIDVIKKGIIQSF
                     EITHELAWKLMQDILKWEGEVDIYGSKTASRLAFNRGLITQGEVWLEMIKSRNITVHT
                     DDETILTEEFNKIIKAYLPLFIEFEQRVETLCQTLD"
     gene            8790..9101
                     /locus_tag="PXD18_000336"
     CDS             8790..9101
                     /locus_tag="PXD18_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HDL6300804.1"
                     /translation="MPNFGLSERATKTITDILAKYPEVEQAIIYGSRAKGNYREGSDV
                     DLTFKGKDLTYDIVKRIWGDLDDSDSPYLFDLSIYHQLTNANFIEHIDRVGKVFYQRE
                     L"
     gene            9212..10375
                     /gene="mnmA"
                     /locus_tag="PXD18_000337"
     CDS             9212..10375
                     /gene="mnmA"
                     /locus_tag="PXD18_000337"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HDL6300805.1"
                     /translation="MTTQLTSKTYDTHFPKLTPEQLAENSKKKVIIGMSGGVDSSVSA
                     FILQQQGYQVEGLFMKNWEEDDDTDYCTAAAELADAQAVADKLGMKLHKINFAAEYWD
                     NVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEYAAEDLGADYIATGHYVRRTSDDQD
                     AKLLRGLDENKDQSYFLYALNKKQIGQSLFPVGEIEKPIVRAIAEDLGLATAKKKDST
                     GICFIGERKFKDFLARFLPAQPGEIRTVEGKLVGRHDGLMYHTLGQRKGLGIGGVKGL
                     SEDPFYVVEKDLINNVLIVAQGHDNSALLSSGLIAKQLTWVDMQPLRENLRCTVKTRY
                     RQADIACEIQVIDDETIRVMFDEPQIAVTPGQSAVFYLGEVCLGGGIIESQLK"
     gene            10492..11871
                     /gene="argH"
                     /locus_tag="PXD18_000338"
     CDS             10492..11871
                     /gene="argH"
                     /locus_tag="PXD18_000338"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HDL6300806.1"
                     /translation="MALWGGRFTQQADAKFKYFNDSLRFDYRLAIQDIEGSIGWAKAI
                     TSVGILTVAELEQLIAALKEVRAEVESNLTIILKDDAEDIHSWVESKLIEKVGDLGKK
                     LHTGRSRNDQVAVDIKMWCKVQAVALQERIRALQERLVSVAEENQESVMPGYTHLQRA
                     QPVTFAHWCMAYYEMLERDFSRLSDANKRMSTCPLGSGALAGTAYGIDRDLLARDLGF
                     EEATRNSLDSVSDRDHILELLSTASISMMHLSRFAEDLIIFNSGESGFLEMSDRVTSG
                     SSLMPQKKNPDACELIRGKSGRVFGALNGLLTTLKGLPLAYNKDMQEDKEGIFDALET
                     WQACLEIAELVLVDIQVNTERTREAAQQGYANATELADYLVAKGVPFREAHHIVGEAV
                     VYAISKKEPLEALSINEFQQFHHSIGDDVYPILSLESCLEKRCAKGGVNPQRVAEAIA
                     VAKANLASK"
     gene            12039..13037
                     /locus_tag="PXD18_000339"
     CDS             12039..13037
                     /locus_tag="PXD18_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4115 domain-containing protein"
                     /protein_id="HDL6300807.1"
                     /translation="MTESVNSTQAGTALSLGQQLKAAREALNLSITDVAQKTNLKKSH
                     IESLENDIFILQNVAPTFVRGYVRNYVKFLRLPESLISSVNYGEVTIPKEVTKVSSVK
                     PSSNSQGKTLKYLTVLVLLAALGMTLLWWWQGYQKEQENREQFVSSAPVAEVANTATN
                     NDASAQTSVPVQQPIQVSEQPAQVAETVVAAEPALTEKVEPTQAASSPVTQEDVKVVE
                     EVKQADATTAQVEAVNVLQQSQSEQAPTEQPVAVTNDELRIEITGSQSWITVRGAKNK
                     RLAEKLYNNGETLSFNENEQYRLTIGAPANVKVYYKGQEVPLKIDGRVARIHLPLQ"
     gene            13138..14250
                     /gene="ispG"
                     /locus_tag="PXD18_000340"
                     /gene_synonym="gcpE"
     CDS             13138..14250
                     /gene="ispG"
                     /locus_tag="PXD18_000340"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HDL6300808.1"
                     /translation="MIHQSPIKRRVSKKIYVGNVPVGGDAPITVQSMTNTRTTDVEAT
                     VAQIKSLERVGADIVRVSVPTMDAAEAFKAIKQQVSVPLVADIHFDYRIALKVAEYGV
                     DCLRINPGNIGNEERIRTVVDCARDKNIPIRIGVNAGSLERDLQEKYGEPTPQALLES
                     ALRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARAGSV
                     KSAVGLGLLLAEGIGDTLRVSLAADPVEEVKVGFDILKSLRIRSRGINFIACPTCSRQ
                     EIDVIATVNELEQRLEDIITPMDVSIIGCVVNGPGEALVSDLGVTGSNKMSGFYLDGV
                     RQKERFDNAKLIDQLEAKIRARVAQQHNRIDIEQIG"
     gene            14256..15527
                     /gene="hisS"
                     /locus_tag="PXD18_000341"
     CDS             14256..15527
                     /gene="hisS"
                     /locus_tag="PXD18_000341"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HDL6300809.1"
                     /translation="MAKTIQAIRGMNDCSPSESPLWQWVEQKVRNVLASYGYSEVRMP
                     IVESTPLFARAIGEVTDVVSKEMYTFWDNDEQLTLRPEGTAGCVRAAIERGWIYNNEQ
                     RLWYMGPMFRHERPQKGRYRQFHQAGVEVFGIANPEIDAELIILTARLWKELGIDQHV
                     SLQLNSIGSLEARANYRSALVKFLENHTALMNEEEKERLVKNPLRILDTKNEALQNVL
                     NDAPKLLDYLDDDSREHFTQLCALLDAMGIRYEVNPKLVRGLDYYNKTVFEWVTSALG
                     SQGTVCGGGRYDGLVEQLGGHATQGVGFAMGLERLVLLVQEVNKEIDLPKTVDVYIVF
                     SGEGATLNAFQLAEQIRSELPHVGVMTHCSGGKFQKQFKRADKVEAQIALVIGESEVA
                     EKQVVIKDLRSGAEQITIAQSELIAELSKRF"
     gene            15537..16157
                     /locus_tag="PXD18_000342"
     CDS             15537..16157
                     /locus_tag="PXD18_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDL6300810.1"
                     /translation="MSNEYLNKTEEQQFEDAKNWFKENGTPILVAIILACAATAGWNF
                     WKNHQLETAQKTSASYQSVMESYLQNPSKNQPLVEKFIADNKDSSYAAFAQFEVAKQA
                     VEKGNFSAAKTALQSVLTYSDSTLQSIARFRLAQIDFQLKSYDEALASLAQIQDKAWE
                     LRKQILTGDILAAKGDIPAAKSAYEQAKTTANPQEQTLIDVRLNNL"
     gene            complement(16220..17323)
                     /gene="dnaN"
                     /locus_tag="PXD18_000343"
     CDS             complement(16220..17323)
                     /gene="dnaN"
                     /locus_tag="PXD18_000343"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HDL6300811.1"
                     /translation="MQITITREQLLKPLQQVCGVLSSRPTLPVINNLLLEIEGNRLSL
                     TGTDLEVELTTQAQLLQAVDFAGKFTIPAKKFLDISKSLPDDSVISVQFEEDKAIIKA
                     GRSKFSLATLPASDYPNLMDWKPEVDFSIDQSTLARLIDATQFSMANQDARYFLNGMK
                     FETEGNLLRTVATDGHRLAVCTMVLNQELLTHSVIVPRKAVLELSRLVASNDETVRLE
                     IGSSNIRITMNGIVFTSKLIDGRFPDYRRVLPRNADRILEAETETLKRALMRAAILSN
                     EKFRGVRLTLSNNLLKITANNPEQEEAEEIIDVAYDSPEMEVGFNVSYVLDVLNTLKC
                     QRVRFSLVDSSSSCLIEDCDNSSAEYVIMPMRL"
     gene            complement(17342..18691)
                     /gene="dnaA"
                     /locus_tag="PXD18_000344"
     CDS             complement(17342..18691)
                     /gene="dnaA"
                     /locus_tag="PXD18_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HDL6300812.1"
                     /translation="MEQIVSSLWSDCLNHLQTKVSPTDYSTWLRPLQASSENGELTLY
                     AQNQFVENWVKDKFLSEITELARFLAKNDNLVVTLKVGIKPTEQPKVSPNLKNESSEF
                     SNTGFKTGLNPNQTFDNFVQGRSNQLAKLVAQQVVDNLGESHCNPLSFYAGTGLGKTH
                     LLHAIGNELVKRTPGTRVLYIHLERFYRDIIKAINSSNNDAEKIKKFYRSLDVLMIDD
                     IQFLANKPKVQEEFLHLLNALFEQRKQIILTSDVLPKNIDKIDTAIKSRLSGGISATI
                     EPPELETRVAILRQKALERGADLQEDAAYLMGQKLRTNVRELEGALNRVIAWQKLTLR
                     PITVDAVRETLQDLFASFDYLITIENIQRIVAEYYGIKVADIKSKSRARSIARPRQMA
                     MALAKELTNHSLPEIGREFGGRDHTTVMHACKTINELRDTESGIQEDYIHLTRKLSS"
     gene            complement(18878..20725)
                     /locus_tag="PXD18_000345"
     CDS             complement(18878..20725)
                     /locus_tag="PXD18_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6300813.1"
                     /translation="MFEKLFKWFEARVETYPNEMPKTPKSGLIPFIYDATKGMRFYIL
                     LLTVLVAAVGIIEAVLFRFMGDLVDWVNKYSPTELWAEKGWTIIGMFFIALLAVVFVY
                     LASSIRFQSLQGVFPMRLRWNFHRLMLGQSLGFYQDEFAGRVSAKVMQTALSVRDVIM
                     TCADMLVYVLVYFTTSSVILLQLDGWLFVPFILWVISLAATIIYFVPKLAQAAQEQSD
                     ARSLMTGRITDAYANIATVKLFSHGNRESAYAKESMEGFMVTVHKQMRLVTVIETVTN
                     LTSMALIISTAGIGLWLWGSSVVTAGAIATSTALALRIKGLSQWIMWEFARLFENLGT
                     VQDGMITLSKPHNVVDKIDAKPLNVTKGEIKFENVDFAYDPKKPLLKDFDLTIKPGEK
                     VGLVGRSGAGKSTLTNLLLRFYDIQDGSITIDGQNIRDITQESLRSQIGLVTQDTSLL
                     HRSVRENLMYGRPNATEEEMIKAVEQAAASEFIPNLQDAKGRTGFDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEVAIQENLTQLMEGKTVVAIAHRLST
                     IMAMDRLIVLDKGEIVEQGTHEELLAQNGVYARLWAHQSGGFLPENTDI"
     gene            complement(20794..21303)
                     /gene="luxS"
                     /locus_tag="PXD18_000346"
     CDS             complement(20794..21303)
                     /gene="luxS"
                     /locus_tag="PXD18_000346"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005706864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HDL6300814.1"
                     /translation="MPLLDSFKVDHTKMNAPAVRVAKTMTTPKGDTITVFDLRFCRPN
                     IDILPVRGIHTMEHLFAGFMRDHLNSEQVEIIDISPMGCRTGFYMSLIGSPSAEEVVK
                     AWTASMEDALHKIPDVSAIPELNEYQCGSYKEHSLKEAHQIARNVLAAGIGINRNEDL
                     ALDEKLLNP"
     gene            complement(21321..23987)
                     /locus_tag="PXD18_000347"
     CDS             complement(21321..23987)
                     /locus_tag="PXD18_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HDL6300815.1"
                     /translation="MTMEENTHTVVDAQIRQPRKISPFWLLPIVAFIIGALLFFQILK
                     EQGETITIRFSKGDGITAGKTAIRYQGLQIGQVKRVYFVDNLKEVEVQAEINPEAKSI
                     LRKQTKFWLVQPSASLAGVSGLDAIVSGNYITLLPGEGDFVDEFIAEEDPPAITVSDG
                     DLLIRLISDDIGSITVGASVYFRKVPVGNIADYRFTKDQKKIEIDVVINQKYAHLVKK
                     ESRFWNISGISADVNLQGIKINMDSLASVVQGAVAFDSPDNMEIAEQGQKFELYPDLK
                     SAKRGIEINVKLPLTHNLKINETGVFHQNVQIGMLSQLKLPQVKDNGVPQQESGQHKQ
                     IDGVLLIDPSYENLLRSQTKILLKEPKFSLNTEQLTKVGELLRGVYFEVHPGEGEPQS
                     EFVVQNEADYLLSLPNLLSFSLIAPQAYGVDTNQGIYYSDVQIGEIVKRSLELDKVRF
                     DVIIYPPYRNLIGSNSKFVAISNIDMSVGLDGLRVHAGSPSEWLKGGVRLINGKNDGS
                     PKKQYALYKDIESAESGMATLDKKATTTLSADSLSGISEGSLVLYRDFQVGEVLKITP
                     KQQKFEVELFIQPNYRHLLTEKSRFWIEPATSVDVSLKGVNITTAPLMRTLKGAISFD
                     DGGSKGNKTLYASKEKATSGNTYLTLIAKDASKLSEGMDIKYMGLTVGQIEKLELQNA
                     KKQIKATAYIQRKYYPLIAKAGSKFNVISPEISTSGFKNLDAALQNYITVDVGSGQAQ
                     NQFVLADTDTVKTTYANGFPIIVETTNANGIQPEAPVLYRGMQVGIVSRLGLSELGDR
                     VLIYVNIQDKYKHLVRTNTQFWQASGYTMDVSLQGVSMNSGTMSQLLNGGIEFSTPYT
                     KVVKPQAQPNRRFFLQRKLPDEAPAWDQGIAE"
     gene            complement(24070..24510)
                     /gene="fur"
                     /locus_tag="PXD18_000348"
     CDS             complement(24070..24510)
                     /gene="fur"
                     /locus_tag="PXD18_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HDL6300816.1"
                     /translation="MSEANIKRLKEVGLKVTEPRLTILALMQDIRDEMQHFAAEDIYK
                     ILLEKGSDIGLATVYRVLNQFEEAGILTRHNFDANKAVFELNMNHEHDHIICMDCGKV
                     FEFKDPDMERRQREISEKHGMELTNHSLYLYGKCSNLTNCDEKK"
     gene            complement(24546..25070)
                     /gene="fldA"
                     /locus_tag="PXD18_000349"
     CDS             complement(24546..25070)
                     /gene="fldA"
                     /locus_tag="PXD18_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HDL6300817.1"
                     /translation="MAVVGLFYGSDTGNTENISKMIQKKLGAELIDIRDIAKSTKEDI
                     EAYDFLMFGIPTWYYGESQADWDDFMPTLKEIDFNGKVVAIFGCGDQEDYAEYFCDAM
                     GTVRDVVEPNGGVIVGHWPTAGYTFEVSQALVDDDTFVGLCIDEDRQPELTTERVNKW
                     CEQLKEEMCLDQLA"
     gene            complement(25076..25351)
                     /gene="ybfE"
                     /locus_tag="PXD18_000350"
     CDS             complement(25076..25351)
                     /gene="ybfE"
                     /locus_tag="PXD18_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA regulated protein"
                     /protein_id="HDL6300818.1"
                     /translation="MAKQDSDCITLDLFATVPKVGRPRTNPLDREQQLRINKRNQLKR
                     DKSSGLKRVELKLHSNLVKLLEEQASEQGVSRGQLIETILNNYLTNR"
     gene            25592..26578
                     /locus_tag="PXD18_000351"
     CDS             25592..26578
                     /locus_tag="PXD18_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDL6300819.1"
                     /translation="MSNIHLAIAADFTLAEKLLEALANQDLGIENISAVELEPFGEEQ
                     NLRFGAKAVAQYALDEVNWAEFSHVLFAGKMAQAEVLAEAVKAGCVILDLYGITALIG
                     DVPVVVPSVNDENVANLRERNIVALANPQISQLALALKPLLNEPLKQVWVTSLLPSAY
                     FGDEKVKELAGQTARLLNGIPFDENAERIAFDVVPANVQGEEKSLPFSKAFELQIAKV
                     LPNLTACTTFHSVQVPVFYGVSQMVSVQSEYQLDANALSEAWKAENWLNFNENSVITA
                     VKNGENEEQNALEISQLLAKSEQEVQFWTVADEQRFSLAFLAVKLLKLVLAY"
     gene            26675..27970
                     /locus_tag="PXD18_000352"
     CDS             26675..27970
                     /locus_tag="PXD18_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDL6300820.1"
                     /translation="MLEKLFQLKAKGSNVKTEIIAGITTFFTMVYIVFVNPSILGVAG
                     MDTQVVFVTTCLIAAFGTIAMGLFSNLPIALAPAMGLNAFFAFVVVQKLGYSWQVGMG
                     AIFLGSVGLFLLTVLQVRYWFMSAIPLGLRVGIGAGIGLFIALIGFKNMGLVVPNPAT
                     LVALGDLHDPKVLMGILGFFIIVVLAAKGIHSGVLISIVIVTALALAFDPAVSFNGIM
                     SMPPSLGAVVGQVDIAGAFDVALLGMIFSFMLVNLFDSSGTLIAVTTKAGFADEQGRF
                     PKMKQALLVDSTAAMAGSYMGTSAISTYIESGSGVSVGGRTGLTAVVVGILFLLTIFF
                     SPLAGLVPAYATAGALVFVGILMASSLIEVKWDDLTEATPAFITTAMMPFTYSITEGI
                     AFGFISYCVMKAFTGRWKEINLSVLVVSLLFIAKFVWVG"
     gene            28091..28459
                     /locus_tag="PXD18_000353"
     CDS             28091..28459
                     /locus_tag="PXD18_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/DsrF/TusD sulfur relay family protein"
                     /protein_id="HDL6300821.1"
                     /translation="MSNSVQKLLFIINSAPYGNETFFSALRLALQIQEQHKANTEIKL
                     FLMSDAVTAGLAKQNPAEGYHIQQMLEILTAQGANVKLCKTCTNARGITDLPLADGVE
                     IGTLIELADWTIQADKVLNF"
     gene            28459..29652
                     /locus_tag="PXD18_000354"
     CDS             28459..29652
                     /locus_tag="PXD18_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDL6300822.1"
                     /translation="MQNIDVVVIGAGAAGLFCAAQLGQAGKKVVVLDSGKKVGRKILM
                     SGGGFCNFTNLDVSAGNYLSQNRHFVKSALSRYTQWDFISLVSHYGISYHEKELGQLF
                     CDESSQQIVDLLQAECNKGKVEILLRQAVISVEKVANFFEISTACGKFQSEHLVIATG
                     GLSMPALGASPFGYQLAEQFGIPVVPPRASLVPFTWKESDKYFAELSGIALPITVSAN
                     GKSFSNQMLFTHRGLSGPAILQISNYWELGETVEIDLLPSQSITDILSELRQSSPKLQ
                     LKTVLSRYLPKKLVEVWLEQKLLTDKVIADLSKKDLTLLEQFIHHWHFLPNGTEGYRT
                     AEVTKGGVDTDYISSKTMEAKNTAGLYFIGEVLDVTGWLGGYNFQWAWSSAFACAEGI
                     IEKSK"
     gene            complement(29723..29941)
                     /gene="infA"
                     /locus_tag="PXD18_000355"
     CDS             complement(29723..29941)
                     /gene="infA"
                     /locus_tag="PXD18_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HDL6300823.1"
                     /translation="MAKEDCIEMQGTILETLPNTMFRVELENGHIVTAHISGKMRKNY
                     IRILTGDKVTVEMTPYDLSKARIIFRAR"
     gene            complement(30051..30710)
                     /locus_tag="PXD18_000356"
     CDS             complement(30051..30710)
                     /locus_tag="PXD18_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtjB family periplasmic protein"
                     /protein_id="HDL6300824.1"
                     /translation="MYISREKITKTLLLAGITLLCCGIVAVILMGVNQFKLGSQLASI
                     NQVSNLSHLLVRQQANIFSFLLVKNAKTDELVDALDSFAKEDFIIDANIYSPNGVLLA
                     QSQNAKDLKVLLDSEQSAKTQQIVEPIFSQQALVGFLRVTFDAEYGQTTKARVEQQFH
                     QLYGEIIILLLTGILLASSINYYFRRKIHHVQISPKPLMSQVKTQTQRFHSRRRWIKR
                     K"
     gene            30796..31659
                     /gene="serB"
                     /locus_tag="PXD18_000357"
     CDS             30796..31659
                     /gene="serB"
                     /locus_tag="PXD18_000357"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HDL6300825.1"
                     /translation="MTNTIFIYSKTLNEREIEQFSQQTAAILLKQAVYLDYKIAFFST
                     NLTACELRETAQKINADISDLTIIPTLNQGGLLLMDMDSTAIKIECIDDIAKLAGTGE
                     VVSAITASAMRGELDFEQSLRKRVGTLENASESILQKVRENLPLMDGFEQMVAILKEH
                     GWKLAIASGGFDYFADYLKQKYGLNFAVSNQLEIIDGKLTGKVLGKVVDAQHKADTLQ
                     NLATTFNIPPNQWVAVGDGANDLPMLKTASLGVALHAKPKVQAQADFVVNFGDLTALC
                     LLLNANHLFQH"
     gene            31675..32166
                     /locus_tag="PXD18_000358"
     CDS             31675..32166
                     /locus_tag="PXD18_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HDL6300826.1"
                     /translation="MPSFDIVSEITMHEVRNAVENANRVLSTRYDFRGVEAVIELNEK
                     NESIKLTTESDFQLEQLIEILIGSCVKRGIEHSSLDIPTESEHHGKLYSKEIKLKQGI
                     ESDMAKKITKLIKDSKIKVQAQIQGEQVRVTGKSRDDLQAAIQLVKGADLGQPFQFNN
                     FRD"
     gene            32251..32427
                     /locus_tag="PXD18_000359"
     CDS             32251..32427
                     /locus_tag="PXD18_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5363 domain-containing protein"
                     /protein_id="HDL6300827.1"
                     /translation="MMSEQTEKKGWFKKALEKYDAFCDELGVNQGACRGCVPVVKFDP
                     EPEKEQPEKSENKT"
     gene            complement(32475..32771)
                     /locus_tag="PXD18_000360"
     CDS             complement(32475..32771)
                     /locus_tag="PXD18_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300828.1"
                     /translation="MKKHHIIILTLASASVVACSSNTPVQVVNGDKNIDYSQPKTIYI
                     SETNTQPPALTKQEKIKPSNATALCFNGSYSTDIQNPCKKDGGVKQYFAHHHAN"
     gene            complement(32848..33816)
                     /gene="mdh"
                     /locus_tag="PXD18_000361"
     CDS             complement(32848..33816)
                     /gene="mdh"
                     /locus_tag="PXD18_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDL6300829.1"
                     /translation="MCQSKKVALLGAAGGIGQSLALLLKLNLPAKSELSLYDISPVTP
                     GIAVDLSHIPTDVKVTGFAGEDPTEALKDADVVVISAGVARKPGMTRADLFNTNATIV
                     HNLVEKAAKVCPKACIAIITNPVNTIIPIAAEVLKKAGVYDKNKLFGVTTLDVIRANT
                     FVAEAKDVNVKYVRVPVIGGHSGTTILPLLSQATVNGLKLEFTQEQIEQLTHRIQNAG
                     TEVVEAKAGGGSATLSMAQAGAEFALGLVRALIGEDVIRYAYVDNANGETSPAFFAYP
                     IRLGTNGVEKVLPIGNLSEFEKDQLEQLIPVLNDEIQLGQTFNKNA"
     gene            34012..34473
                     /gene="argR"
                     /locus_tag="PXD18_000362"
     CDS             34012..34473
                     /gene="argR"
                     /locus_tag="PXD18_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HDL6300830.1"
                     /translation="MDKIDSLSEAFKSLLKEEKFGSQSEIVAALQEMGFDNINQSKVS
                     RMLSKFGAVRTRNPKMEMVYQLPVELSVPTTSSPLKNLVVDIDHNDALIVVKTSPGAA
                     QLIARLLDSMGKAEGILGTIAGDDTIFITPVRNVQIEKLVKNVTQLFETSL"
     gene            34523..35419
                     /locus_tag="PXD18_000363"
     CDS             34523..35419
                     /locus_tag="PXD18_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HDL6300831.1"
                     /translation="MHIFITGGTGFIGRELIQQLKSENHHFTLLTRDTEAKSDDLQIN
                     YCYSLDELVDLNDFDAVINLAGEPIFDKRWTDEQKQKLIESRVNLTNKLSQLMNASSN
                     PPHTFLSGSAIGIYGDLPPSANFYTESTACYQDCFTNRLCQQWEAAALKAASDKTRVC
                     LIRTGTVFSPEGGALKKILPLYRCGLGGKLGSGKQYWAWISRRDHVQAVIFLLKNANC
                     SGAYNFVAPNPVRNEEFNRILANAVNRPAFFTVPEFALKLGLGERACLVLDNQQLIPE
                     KLLAASFVFQDPILTENVFLNP"
     gene            35464..37662
                     /gene="uvrD"
                     /locus_tag="PXD18_000364"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
     CDS             35464..37662
                     /gene="uvrD"
                     /locus_tag="PXD18_000364"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HDL6300832.1"
                     /translation="MDFSLLLDGLNDKQREAVAAPIGNYLVLAGAGSGKTRVLTHRIA
                     WLIGVENVPESNILAVTFTNKAAAEMRHRIEYTLSQSGDNRLFGMWVGTFHSIANRLL
                     RSHYLDADLPQDFQIMDTEDQQRLLKRLLKLHNIDEKHFPPKHVAWYINAQKDKGKRA
                     KDIDHYNDPNEKKLVEIYQIYQDACDRAGLLDFAELLIRAYELFKTKSTILQRYQQRF
                     QQILIDEFQDTNNIQYDLIRLLAGDVGKVMIVGDDDQSIYGWRGAQVENIQRFLNDYD
                     NAQTIRLEQNYRSTGNILSCANELIANNDNRLGKNLWTDSGDGEPVDIYCAFNELDEA
                     RFVASQIKQWKEDEGDLAECAVLYRSNSQSRVIEEALIQANIPYRIYGGMRFFERQEI
                     KDALAYLRLIANRQDDAAFERVINTPTRGIGDRTLDTLRQITRGRQITLWQAIQVAVQ
                     EEQLSGRATSSLLRFVELINALDQETEQMSLAEQTDFVIKKSGLYEMYKQEKGEKGEV
                     RIENLEELVTATKQFVKPDEAEELTDLTAFLTHASLEAGEAQASQHEDYVELMTLHSA
                     KGLEFPRVFIVGVEEGIFPSGMSFDEGRLQEERRLAYVGITRAKKKLTISYAESRRLY
                     GKEERHVPSRFIAELPEEHIREVRLRGSINRAASFNQANSFAKNPTKTTASFLNDDTW
                     KMGQKVNHAKFGQGTIINVEGSGEATRLQVAFVGNGIKWLIAKMANLERI"
BASE COUNT        11136 a         7247 c         8237 g        11143 t
ORIGIN      
        1 atttcaaaat tgcctagcta aaaaaatttt tgcaaattgt taataaaatt taaccgcttg
       61 aagggaaatt ggattaacta attatggtta atttatgtta agagggaatt gaaatcttga
      121 tttatttcaa attttaccgc gggaatatgc aaaaaatagg gggttttcct agccagaagg
      181 ggagcttttt aggtaaaata agaagattat ttttagttaa ccttttgtta agaaaagata
      241 aaggttgatc acagatttga gaacttaatg tggcttttaa aaataggtgg gggaccattg
      301 tttattttta agtaaagctg cggctcaata gaagcgattg cgttagcgca atcatatttt
      361 ttaacccaaa agaaaagtag tgcaaacaat atgattacaa tcaaaaaagg cttagatctt
      421 ccgattgcgg gaaaacctga gcaagtaatc cataacggta ataccgttac tgaagttgct
      481 atgcttggtg aagaatatgt gggtatgcgt ccttcaatga aagtgcgtga aggcgatgta
      541 gtaaagaaag gtcaggttct ttttgaagat aaaaagaatc cgggcgtggt atttactgcc
      601 cctgcaagtg gtaccgtaac ggcaattaac cgtggcgaga agcgtgttct tcaatcggta
      661 gtaattaaag ttgagggtga tgagcaaatt acctttgctc gttatgaagc cagccaatta
      721 gcttcattaa cttcagagca agtaaaacaa aaccttgtag agtcaggctt atggacggct
      781 ttccgtacac gtccgtttag caaagtgcct gcattagatg cagaaccttc ctctattttt
      841 gtcaatgcga tggataccaa tccacttgca gcaaatccgg aagtgattat tgcagaacac
      901 caacaagctt tctttgatgg cttaactgta ttaagtcgtt tatttgaaag taaaaaagtg
      961 attcatctct gtggcagtgc agactcaaat attttaaatg cggcacaaag ccgtcagatc
     1021 aataatgtgg aaactaaccg ctttaaaggt ccgcaccctg caggtctttc tggtacgcat
     1081 attcacttta ttgacccggt aggtgcaact aaacaagttt ggtatttaaa ttaccaagat
     1141 gtaattgcta tcggtaaatt atttacgacc ggtgagctat ttactgaccg tgtagtcgca
     1201 ttagccgggc cacaagtgaa aaatccacgt ttggtgcgta ctcgtttagg ggcgaatctt
     1261 tcacaattaa cagccaacga attaaatgcg ggtgaaaacc gtgtcatttc aggttctgtg
     1321 ttaagtggtg ctatcgcaac gggagtacac gactatttag gtcgttacgc attacaagtg
     1381 tctgctttat tagaagggcg tgagaaagcg ttcttcggta tgattgctcc ttactctgat
     1441 aagtattcaa ttacgcgtac tactttaggg cattttgcga agaaattatt taacttcaca
     1501 acagcagttc acggtagtga gcgtgcaatg gtaccaacag gggcttatga gcgtgtaatg
     1561 ccgttggata tcattccaac actcttattg cgtgatttag cagctggaga tacagactcc
     1621 gctcaagctt taggctgctt agagttagac gaagaagatt tagcgttatg tacttttgtg
     1681 tgttccggta aaaacaactg gggaccatta ttacgtcaag cgttagataa gatcgagaag
     1741 gacggttaaa aatgggtttg aaaaatcttt ttgaaaaaat ggaacccgct ttccataaag
     1801 gtggaaagta tgagaaatgg tacacgctat ttgaagctgc ctatacgatt ttctatacac
     1861 cgggtacggt cactcgtaaa gatgctcacg tgcgtgatgc gattgactct aagcgtatga
     1921 tgttaattgt atggttagcg ttattccctg cgatgttcta cggaatgtac aatgttggtg
     1981 cacagggtat tctagcggca ctcaaaatgg gaacattaac ggatttagtt gctaacaact
     2041 ggcactacag cttagccgat agtttaggct ctgtagctga tgcaggctgg ggaactaaaa
     2101 tgttgctggg ggcaacctat ttcctaccaa tctacttaac agtatttgca gtgggcggtt
     2161 tctgggaagt ggtgtttgca atggtgcgta agcacgagat caacgaaggt ttctttgtaa
     2221 cctctatctt actagcatta attgttcctc caacattacc gttatggcaa gcagcccttg
     2281 caactacctt tggtgttgtg gtcgcaaaag aagtgttcgg tggcgtgggt aaaaacttta
     2341 tgaaccctgc gttagccggt cgtgctttct tgttctttgc ttacccgggt caaatttcag
     2401 gtgatgcagt atgggttgcc gcagacggct tctcaggtgc aactgcactt tctcaatggg
     2461 cagttggtgg tcaaggtgca ttacagcacg ttgcaaccgg tgaaaccatt acttggatgg
     2521 atgcgttctt aggtaatatt ccgggttcta tcggcgagac ctctacctta atgttgatta
     2581 ttggtgctgc aatcattgta tttgcccgaa ttgcttcttg gcgaattatt gccggtgtaa
     2641 tgattggtat ggcggcaact gcgacattat ttaatgtaat cggttctgat accaacccat
     2701 tattctctat gccttggcat tggcatttag tattaggcgg ttttgcgatc ggtatgttct
     2761 ttatggcaac cgacccggta tcagctgcat ttaccaacaa aggtaaatgg gcatacggta
     2821 tcttaatcgg ctttatgtgt gtattaatcc gtgtggtaaa cccagcatac cctgaaggta
     2881 tgatgttagc gatcttattt gctaacttat ttgctccaat ctttgactat ttagtagttc
     2941 aagggaatat caaacgcaga ttagcgaggg tagcaaacaa tggctaaatt taataaagat
     3001 agcgttggcg gaacgctaac cgttgtagtt ttattaagtt taatttgttc tttgattgtg
     3061 gcaggtgcgg cagtaatgct taaaccaaca caagatattc agaaacaact tgataaacag
     3121 aaaaacatct tacaagcggc cggtttattg caaaaagata ccaatgtgca agaaacctat
     3181 accaaattta ttgagccgaa aattgtcgat ttagcaacag gtgattacgt tgagggtgta
     3241 accggttttg atgctcgtgc agcagctaaa gatcctgctc aaaatgtagt tatcgcacct
     3301 gaagatgata aggcgaatat caaaacgcgt gctaaatatg ctgaagttta tttagtaaaa
     3361 gatgaatctg gcaaaacgac tcaagtagta ttaccaatgc acggtaacgg cttatggtca
     3421 attatgtacg gtttcgttgc ggtacaacct gatgcaaata ccgttaacgg tattacttac
     3481 tatgaacaag gtgaaacggc aggcttaggt ggcgaaattg caaacccgaa ctggcagaaa
     3541 aactttgtag gtaaaaaact gtataacgag caaaaccaag ttgcgttaag agtgggtaaa
     3601 ggggtatctg cagataaaga tcacggtgtt gatggtttat ctggtgcaac attaacctcg
     3661 aacggtgttg atggttcatt caaatactgg tttggtcaaa atggttttgg tccatattta
     3721 gcaaaattta aagcagcggc aggagctaac taatggcaga caataacaat cttaaaaaat
     3781 tattgttatc gccaattgtc gataacaacc cgatcgcatt acagatctta ggtatttgtt
     3841 ctgcgttagc ggtaacgact caattacaaa cagcagtagt aatggcgatt gcggtaagtt
     3901 tagttactgc attctcaagt atgttcattt caatgattcg taactatatt ccaaatagta
     3961 tccgtatcat tgtgcaaatg gcgattattg catcattagt aattttggtt gaccaaatct
     4021 tacgcgctta tgcttacgat ctgtcaaaac aattatcggt attcgtaggc cttattatta
     4081 ccaactgtat cgtaatgggg cgtgcagaag cattcgcgat gaaatcaggc ccggttgaaa
     4141 gttttgttga tggtatcggt aacggtttag gctacggtgc aatgttaatt atcgttgcct
     4201 ttttacgtga acttatcggt tcaggtaaaa ttttcggtat caccattctt gaaactgttc
     4261 aaaatggcgg ttggtatcaa gcaaacggtt tattcttatt agcaccaagt gcgttcttta
     4321 ttatcggatt tgtgatctgg gcgattagaa cgtggaaacc ggaacaagtg gagaaataag
     4381 atggaacatc ttctgagtat ctttgttaag tccatattta ttgaaaatat ggcactttct
     4441 ttcttccttg gtatgtgtac attccttgcg gtgtctaaga aagtttcaac tgcttttggt
     4501 ttaggtattg cggtaattgt agtacttggc attgcagttc cagctaacca attagtttat
     4561 acccacgtat taaaagaggg tgcattagta gaaggtgtgg atttaagctt cttaaacttt
     4621 atcactttca tcggggttat tgcggcactt gttcaaattc tggaaatgat tttagacaag
     4681 tttttcccgg cactttatag tgcattaggt atcttcttac cacttatcac cgtaaactgt
     4741 gcgatttttg gtggtgtatc gtttatggta caacgtgagt ataactttgt agaatctgtg
     4801 gtttatggcg taggtgcagg tacaggctgg atgttagcca tcgttgccct tgcaggttta
     4861 accgagaaaa tgaaatattc cgacgtgccg gcaggcttac gtggtttagg tattaccttt
     4921 attacggtag gcttaatggc gttaggcttt atgtcattct caggcattca attataagga
     4981 gcatatcgtg gatagtaatt ttattttcgg tattatcgca tttacggctc tggtattagt
     5041 gcttgcggtg atcattcttt tcgctaaatc aaaattagtt gattcaggtg atattaccat
     5101 ctcaatcaac aacgatccgg aaaaaggcat tacgctaccg gctggtggaa aattactcgg
     5161 tgctttagca agtaaaggga ttttcgtttc gtcagcttgt gggggcggtg gctcttgcgg
     5221 tcaatgtaaa gtacaagtga aatcaggcgg tggtgaaatt cttccaactg agttatcgca
     5281 catttctaag aaagaagcga aagaaggctg gcgtttagct tgtcaggtaa acgtgaaatc
     5341 ttcaatggac gttgaacttc cggaagagat ctttggtgtg aaaaaatggg aatgtaccgt
     5401 tatctcaaac gataacaaag caaccttcat caaagagctt aaacttcaaa ttcctgaagg
     5461 cgaagaagta ccgttccgtg cgggtggtta tatccaaatt gaagctgaac ctcataccgt
     5521 tcattataaa gacttcgata ttccaaaaga gtaccacgaa gactgggata aatttgactt
     5581 atggcgttat acttcaaaag tggacgagca tattattcgt gcatactcaa tggcttcata
     5641 tccggaagag aaaggcatta ttatgcttaa cgtgcgtatt gctacacctc caccacgcaa
     5701 tccggacgta ccgccgggtc aaatgtcttc ctacatttgg tcattaaaac cgggtgataa
     5761 agtaacaatt tcaggtccat tcggtgagtt cttcgctaaa gataccgatg cggaaatggt
     5821 ctttatcggt ggtggtgcag gtatggcacc aatgcgttca catatcttcg accaattaaa
     5881 acgtttaaaa tctaaacgta aaatgtcatt ctggtatggt gctcgttctg agcgtgaaat
     5941 gttctatgtg gaagattttg atggtcttca agcagaaaac gataacttca aatggtatgt
     6001 ggcactttct gatccattac cgggcgacag agaagattac ttccgtggct ttattcataa
     6061 cgtgctttat gagaactacc tcaaaaacca cgaagcacct gaagactgcg aatactatat
     6121 gtgtggtcca ccggtgatga atgctgcggt aatcggtatg ctgaagagtt taggtgtaga
     6181 agacgaaaac atcttattag atgactttgg tggttgataa accttaactt ctgactacaa
     6241 gcggtcaaat ttgcaaaatt gaccgcttga tttaatttat attattaagt tttggtaatt
     6301 taataatgtg aattttaagg ggaagcaaat ggaacaactg gatattacgg tacttgaaaa
     6361 tgccttcaat tcccttgaga aaacgattgt cagccttgag aatcaagcgt ggtttaaccg
     6421 gcaagaagca attattcaag acactttgat tgcaggagca atccaaaaat ttgaatttgt
     6481 ttacgaattg tcgataaaaa tgctcaagcg tcagctcaaa aacattgagt caaatgacac
     6541 tgatattgat agcaccgagt tccgtgatat tttgcgaatg gctgctcaat atgggctgat
     6601 tgaatcaccg gaagtttggc tggattatcg caaaatgcga aatattactt cgcatactta
     6661 tgatcaaaat aaagcacagc aggtttataa cggaatttca aactttctgg aaagtacgta
     6721 ttttttagtt aaacagctcc aaaaacgcaa tagctatgat tgatttaact gagtcacaac
     6781 gccaacaggt gttggatatt ttcaaaaaat acttgcctga tacacccgtt tgggtttttg
     6841 gctctcgcat taaaggcaca gccaaagcct attcggatct tgatttagca ttaatcacca
     6901 aacaaccgct cacaattcgg caacaaacag agttagagct tgcgtttacg gattctgacc
     6961 tacctttcac agtagatctg attgactggg caagttgcaa cgaatcgttt aaacaaatta
     7021 ttttacagcg atatgaagtg cttatttaat cgctaaatat gctataattt ccccaatttt
     7081 taacttttgt gacaccaatg aaaaaatttt ttcttctttt aattgctttt tttactttaa
     7141 gtgcttgtga aaaagcccct gagcaaatta cgctgtcagg caaaaccatg ggaacgactt
     7201 acaccgtaaa atatattgat aatggtgaag tggagaattt gatttcgcct gaaaaaatga
     7261 aaaatgagct ggatggctta ttgattgagg tgaataatca gatgtccacc taccaacaag
     7321 attcggaaat tagccgtttt aatcaagcaa agcaggcaaa tcaagcggtc gaaatttcgc
     7381 aggattttgc aaaagtggta caagaggcaa tccgtttaaa taaagtaacc gaaggggctt
     7441 tagatgtaac cgttggtcca ttggtgaact tgtggggctt cgggccggat aaacgcttaa
     7501 ataaagtgcc gtctgatgaa caaattgcag agcgttctgc ttatgtcggc attgataaaa
     7561 ttttgcttga aatgagtagt aaacccaagc tcaccaagtc agcagctaat ctttatctag
     7621 atttatcgtc tattgcaaag ggtttcggtg tagataaatt agccgagcat cttgaaacta
     7681 taggtgtgag caactattta gttgaaattg gtggcgaatt acgaggcaaa ggaaaaaatt
     7741 tacaaggctt agattggcgg attgcaatcg agaagccggt aatgacacaa ggtcaagccg
     7801 cacaaattac cgtgccgttg cacaatttgg cgatggcaac ttcgggcaat tatcgtaatt
     7861 attttgaaga tgaaaaaggc aaccgtcttt cacatattat cgacccaaaa cagttacgtc
     7921 cggtaaacca taatttagcc tctatcaccg tatttgcccc aactacaatg acggcagacg
     7981 gcttatcaac cggtttattt gttttaggag cggaaaaagc attagcagtg gcagagcgtg
     8041 aaaaattagc tattttttta attgttaaaa acggcgataa atttgagaca caaatgtcga
     8101 gcgaatttag caaacttatt caatcacaat agttggagtg aaaaatggaa actgtattat
     8161 taacctttgg cttttttgta gccgtaattt ttgcgatgtc gattggtttt atcgtgaaag
     8221 gcaaaaccat caaaggcagc tgtggcggta tcaccgcttt aggtatgaaa aaaatgtgcg
     8281 actgcgaaga accttgcgat aacctaaaat ctaaaatcgc agacggcaca gccgaccctg
     8341 aagaagtggc acgttttaat aaagagccac aattttatga agtgaaataa tatgaataga
     8401 gatattcgct ggaaacagcg gtttgataac tataaaaaat cagtaagtta ccttcaagca
     8461 gaagcagaaa aatacgctga taccgacatt gatgtaatta aaaaaggaat tatccagagt
     8521 tttgagatta cacacgagtt agcgtggaag ttaatgcaag atattttaaa atgggaaggt
     8581 gaagttgata tttatggttc aaaaacggct tctcgtttgg cttttaatcg tgggctaatc
     8641 actcagggcg aagtttggct agaaatgata aaaagccgca atataacagt tcatactgac
     8701 gatgaaacta ttttaactga agaatttaat aaaattatca aggcgtatct gcctttattt
     8761 attgaatttg aacagcgagt agaaacacta tgccaaactt tggactaagc gaacgagcga
     8821 cgaaaactat taccgatatt cttgcgaaat accctgaagt ggagcaagcc attatttacg
     8881 gctcgcgtgc taaaggtaat tatcgtgaag gctcagatgt agatcttact tttaaaggaa
     8941 aagatcttac ttacgatatt gtcaaacgca tttggggtga tttagacgat tccgactcgc
     9001 cctatttatt tgacttgtcg atttatcatc aattaaccaa tgccaacttt attgaacata
     9061 ttgatagagt aggaaaagtc ttttaccaaa gagaactcta atttcttaat aggcaagcgg
     9121 ttcattttgc aaaatttttt gcaaatttca ccgcttgttg tttttattat taaccaatgt
     9181 gcttcgcctt aaccgaagtt acgggagatt tatgacaact caattaacct caaaaaccta
     9241 cgacactcat ttccctaaat taaccccaga acaacttgct gaaaacagca agaaaaaagt
     9301 cattatcggt atgtccggtg gggtggattc ctcggtttcc gcttttattc ttcaacagca
     9361 gggctaccaa gtggaaggct tgtttatgaa aaactgggaa gaagatgatg atacggatta
     9421 ttgtaccgcc gccgccgagc ttgccgatgc tcaagcggtt gccgataaac tgggtatgaa
     9481 actgcataaa attaattttg cagcggaata ttgggataat gtatttgaat atttcttggc
     9541 agaatacaag gcaggaagaa cgccaaatcc ggatattttg tgtaataaag agatcaaatt
     9601 taaagccttt ttggaatatg cggcagaaga tcttggtgcg gattatattg cgaccgggca
     9661 ttacgtccgc cgtacgagcg atgatcaaga tgcgaaactt ttgcgtggct tagatgaaaa
     9721 caaagatcag agttactttt tatatgcgtt aaataaaaag cagatcgggc agagtttatt
     9781 cccagtgggt gaaattgaga agccgattgt gcgagccatt gccgaagacc taggattagc
     9841 aaccgcaaag aaaaaagatt ctaccggcat ttgttttatc ggtgagcgta aatttaaaga
     9901 tttcttagct cgttttctac cggctcaacc gggggaaatc cgcaccgttg agggcaaatt
     9961 agtcggtcgc catgatgggc tgatgtatca cacgcttggg caacgcaaag gcttgggtat
    10021 cggtggggtg aaagggctaa gtgaagatcc gttttatgtg gtggagaaag acttaattaa
    10081 caatgtattg attgtggcac aaggacacga taattcagcc ctgctttcaa gtggcttaat
    10141 tgcgaaacag ctcacttggg tggatatgca gccgttgcgt gaaaatttac gctgcacggt
    10201 aaaaacccgt tatcgtcaag cagatattgc gtgtgaaatc caagtgattg atgatgaaac
    10261 cattcgagtg atgtttgatg aaccgcaaat tgccgtgacg ccggggcagt ctgccgtgtt
    10321 ttacttaggt gaagtttgct taggcggtgg cattattgag tcacaattaa aatagttata
    10381 aataaatatt gaaatatttt gcatatttat gcaaaataag cgaaaagtta aggcggtaaa
    10441 acgccttttt cattttgatc gatacaaaga ataatataca aggaacagac tgtggcactt
    10501 tggggtggac gctttacaca acaagcagac gcaaaattta aatattttaa cgattcatta
    10561 cgttttgatt accgcttggc gattcaagat attgaaggct caatcggctg ggcaaaagcc
    10621 attacttcgg taggtatttt aacggtagca gaattagaac aactaatcgc agcattaaaa
    10681 gaggtgagag cagaggtaga atctaacctt accatcatct taaaagatga tgcggaagac
    10741 attcacagct gggttgaatc taagctgatt gaaaaagtgg gcgatttagg taaaaaattg
    10801 cacaccgggc gtagccgtaa tgaccaagta gcggtggata ttaaaatgtg gtgcaaggtg
    10861 caagcggtgg cattgcaaga aagaatccga gctttgcaag agcgtttggt ttccgttgcc
    10921 gaagaaaatc aagagtcggt gatgccgggc tatacccatt tacaacgagc tcagcctgtg
    10981 accttcgctc attggtgtat ggcgtattat gaaatgctag aacgggattt cagccgtttg
    11041 agtgatgcta ataaacgtat gagcacttgc ccgcttggtt caggggcatt ggctggtacg
    11101 gcttacggca ttgatcgtga cttattagcc cgtgatttag gctttgaaga agccacacgc
    11161 aacagtttag acagcgtgtc agatcgtgac catattttag agctgctctc tactgcctcg
    11221 atcagtatga tgcacctctc tcgctttgct gaagatttaa tcatttttaa tagtggcgaa
    11281 tcaggcttcc ttgaaatgtc ggatcgtgtg acctcaggct catcacttat gccacagaag
    11341 aaaaaccctg atgcttgtga gctgattcgt gggaaatccg gtcgggtatt tggggcatta
    11401 aacggtttat taactacact caaagggtta ccacttgctt ataataaaga tatgcaagag
    11461 gacaaagagg gtatttttga tgcgttggaa acttggcagg cttgtttaga aattgcagaa
    11521 cttgtactgg ttgatattca agtgaatacc gaacgcaccc gagaagccgc tcagcaaggt
    11581 tatgcgaatg cgaccgagtt ggcagattat ttagtggcga aaggcgtgcc attccgtgaa
    11641 gctcatcata ttgttggcga agcggtggtt tacgcaatca gcaaaaaaga gccacttgaa
    11701 gcattaagca ttaacgaatt ccagcaattc catcattcga ttggcgatga tgtttaccca
    11761 attctctcgt tagaatcttg cttagaaaaa cgttgtgcca aaggtggagt gaacccacaa
    11821 cgtgtggcag aggcgattgc ggtagccaaa gccaatttag cttcaaagta aaaccggata
    11881 caagcggtca tattttgcaa aaaaattgaa aaatatgacc gcttgccgat taaattttca
    11941 attttttacg cattaagatt gcaaaatagg cattacctct ttaaacttcc gaataatttt
    12001 tgaattttat ttctactact ttctttaaag agttttatat gacggaatca gttaattcta
    12061 ctcaagctgg tacagcactt tctttagggc aacaattaaa agcggctcgt gaagcgttaa
    12121 atctctctat tacagatgtt gctcaaaaaa ccaacttaaa aaaatcacat attgaatcac
    12181 ttgaaaatga tatctttatt ctacaaaatg ttgccccaac ttttgtgcgt ggctatgtgc
    12241 gtaattatgt gaaatttttg cgtttacctg aatcccttat ttcgagcgtt aattatggtg
    12301 aagtcactat tccaaaagaa gtcactaaag tttcttcagt aaaaccttca tcaaattcac
    12361 aaggtaaaac cttaaagtat ttaacggtat tagtattgct tgcggcatta ggaatgacat
    12421 tactttggtg gtggcaaggg tatcaaaaag aacaggaaaa tcgcgagcaa tttgttagct
    12481 ctgcaccagt tgctgaagtg gcgaataccg ctacaaataa tgatgcttca gcacaaactt
    12541 ccgtgcctgt tcagcaacct attcaggttt cagagcagcc tgctcaagta gcagaaacgg
    12601 tagttgcagc agaaccggca ttaactgaaa aagtagagcc tacacaagca gcatcatcac
    12661 ctgtaacaca agaagatgtt aaagtggtag aagaagttaa acaagctgat gccaccactg
    12721 cacaggttga ggcagttaat gttttacagc aatctcaatc ggaacaagcc cctacagaac
    12781 agcctgttgc ggtaacgaat gatgagcttc gtatcgaaat taccggttca caaagctgga
    12841 ttacagtgcg gggtgctaaa aataaacgtt tagcagaaaa attatataac aatggtgaga
    12901 ctttaagttt caatgagaat gagcaatatc gtttaaccat tggtgcgcct gccaatgtaa
    12961 aagtgtacta taaaggtcaa gaagtaccat tgaaaattga tgggcgtgta gctcgtattc
    13021 atttaccgtt acagtaagct tgatttaacg atgaaacgca cgtaaagcta gcatttaacg
    13081 atagctgtct ttacgagcgt tttctgtttt tataaatttt cacaattagc taaaaatatg
    13141 atacatcaat cacctattaa acgtcgggta tcgaagaaaa tctatgtggg taatgtgcct
    13201 gtaggcggcg atgcaccgat tacggttcag tcaatgacca acacccgcac aaccgatgtg
    13261 gaagccaccg ttgctcaaat taaatcgctg gaacgggtcg gggctgatat tgtgcgtgtg
    13321 tctgtgccga caatggacgc tgctgaggca tttaaagcga ttaaacaaca agtgagtgtg
    13381 ccattggtgg cggatatcca cttcgattac cgcattgcgt tgaaagttgc cgaatatggg
    13441 gtggattgct tgcggattaa cccgggtaat atcgggaatg aagagcggat ccgcacggtg
    13501 gtagattgtg ccagagataa aaacattccg atccgaatcg gggtaaatgc cggatcatta
    13561 gagcgtgatt tgcaggaaaa atatggcgag ccgacaccac aggcattatt agaatcggca
    13621 ttacgccacg ttgatcactt agatcgcctt aactttgatc aattcaaagt cagcgtgaaa
    13681 gcctcagatg tatttctagc ggttgaatct taccgacttc ttgcaaaaca gattgatcag
    13741 cccctgcatt taggtattac tgaagcaggc ggagcgagag ccggttcggt gaaatcggcg
    13801 gtaggcttag gtctgttgct agcggaaggg attggtgata ccttgcgtgt gtcattagcg
    13861 gctgatcctg ttgaagaggt gaaagtcggt tttgatattt tgaaatcgct gcgtattcgc
    13921 tctcgtggga tcaactttat tgcttgccca acctgctccc gccaagaaat tgatgtgatt
    13981 gcgacggtaa acgagctaga acaacgttta gaagacatta tcacgccgat ggacgtttcg
    14041 attatcggct gtgtggtaaa cggtccagga gaggcgttgg tgtctgattt aggggtaacc
    14101 ggcagcaata aaatgagcgg cttttattta gatggcgttc gtcaaaaaga gcgttttgac
    14161 aacgcaaaat taatcgacca attagaagct aaaattcgtg ccagagttgc acaacaacat
    14221 aatcgtatag atattgaaca aataggataa atatagtggc aaaaacaatt caagcaattc
    14281 gaggaatgaa cgactgctca ccaagtgagt ctccattatg gcaatgggtt gaacagaaag
    14341 tgcgtaatgt gctggcaagt tacggctatt cggaagtacg tatgccgatt gtagaaagca
    14401 ctccgttatt tgcccgtgcc attggcgaag taaccgatgt ggtgtcgaaa gagatgtaca
    14461 cgttctggga taacgatgag caattaacgc tccgcccgga aggtacagcc ggttgtgtgc
    14521 gtgcagcgat tgagcgtggt tggatctaca ataatgagca acgcttatgg tatatggggc
    14581 cgatgttccg ccacgaacgt ccacagaaag ggcgttaccg ccaattccac caagccggtg
    14641 ttgaagtgtt tggcattgca aatccggaaa ttgatgcgga gttgattatt ctcaccgcac
    14701 gcctatggaa agagttaggc atcgatcaac atgtttcttt gcaacttaac tctatcggct
    14761 cgttagaagc tcgtgcaaat tatcgctcag cattagtaaa atttttagaa aatcacaccg
    14821 ctttaatgaa cgaagaagag aaagagcgtt tggtgaaaaa cccgctacgg attttagata
    14881 ccaaaaacga agcactacaa aatgtattaa acgatgcccc aaaactgctc gattatttag
    14941 atgatgacag ccgtgaacat tttacccaac tttgtgcctt acttgatgca atgggaatcc
    15001 gttacgaagt caatccaaaa ttggtgcgtg gtttagacta ttacaataaa accgtgtttg
    15061 aatgggtcac ttcagcctta ggctcacaag gcaccgtatg tggcggtggg cgttatgacg
    15121 gcttagtcga acaactcggt ggacacgcaa cccaaggcgt tggctttgca atgggcttag
    15181 agcgtttagt gctgttggta caagaggtga ataaagagat tgatttacca aaaacggtgg
    15241 atgtgtatat cgtattctcc ggtgaagggg caacactaaa tgccttccaa cttgcagagc
    15301 agattcgtag cgaattgcca cacgttggcg taatgacaca ctgttccggc ggtaaattcc
    15361 aaaaacaatt taagcgtgca gataaagtag aagcgcaaat tgcgttagtg attggcgaaa
    15421 gcgaagtggc tgaaaagcaa gttgttatca aagatttacg ttcaggagca gaacaaatca
    15481 cgattgctca atcagagctg attgctgagc tatctaaacg attttaggag aaaaagatga
    15541 gtaacgaata tttaaataaa accgaagagc agcaatttga agatgccaaa aattggttta
    15601 aagagaacgg gacaccgatt ttggtggcga ttattttagc ttgtgcggca actgccggct
    15661 ggaatttttg gaaaaatcac cagcttgaaa cggcacaaaa aacatccgct tcataccaaa
    15721 gcgtgatgga gagttatttg caaaatccaa gcaaaaatca accgcttgtt gagaaattta
    15781 ttgccgataa taaagattca agctatgccg cttttgccca atttgaagta gctaaacaag
    15841 cggtcgaaaa agggaatttt tctgcggcaa aaacagcgtt acagtcagtt ttgacttatt
    15901 cggattcaac cttacaatct atcgctcgtt ttcgtttggc tcaaattgac ttccaactaa
    15961 aatcttacga tgaagcactg gcaagtctgg ctcaaattca agataaagcg tgggaattgc
    16021 gtaagcaaat tctaacaggc gatattcttg cagcaaaagg cgatattcct gcggcgaaaa
    16081 gtgcttatga gcaagctaaa acgaccgcaa atcctcagga acaaacctta attgatgtac
    16141 gtttgaataa cttataaaaa caaagcctga ttgaaataaa atcaatcagg cttttttgtt
    16201 ggtttagtgt tgctgtgaat tataaacgca ttggcataat cacatattcg gcagagctgt
    16261 tgtcgcaatc ttcaattaag caactagaac ttgaatcaac taagctaaaa cgcacacgtt
    16321 ggcattttaa ggtgtttaac acatctaata catagctaac gttaaagccg acttccattt
    16381 ccgggctgtc gtaggcaaca tcaatgatct cttccgcctc ttcttgctcc ggattgtttg
    16441 cggtaatttt gagtaaatta ttgcttaagg ttaaacgcac ccctctaaat ttctcattag
    16501 aaagaatcgc tgcacgcatt aatgcccgtt taagggtttc ggtttccgct tctagaatgc
    16561 gatctgcatt gcgaggcaga actcggcggt aatccgggaa tctgccatca atcagtttag
    16621 aggtaaatac aatgccgttc attgtaatac ggatattgct tgaaccgatt tccaaacgca
    16681 cggtttcatc gttgctggca accaagcggg aaagctcaag tacggctttg cgtggcacga
    16741 taaccgaatg agtcaaaagc tcttgattta gcaccattgt gcaaaccgct aaacggtgcc
    16801 catctgtggc aacggtgcgt aataaattgc cttcggtttc aaatttcatt ccgtttaaga
    16861 aataacgggc gtcttggttt gccattgaga attgggtggc atcaatcaga cgggcaaggg
    16921 tagattgatc aatcgagaaa tccacttccg gtttccaatc catcaaattc gggtaatcac
    16981 ttgccggtaa tgtagctaaa ctaaatttac tacgtcctgc tttgataatg gctttatctt
    17041 cttcaaattg taccgaaatc acgctgtcat caggtaggct tttactgata tctaggaatt
    17101 ttttagctgg aatggtaaat tttccggcaa aatcgaccgc ttgtagcagt tgtgcttggg
    17161 tggttaattc cacttctaaa tcggtaccgg ttaaagatag acgattacct tcaatttcta
    17221 ataaaagatt gttaataaca ggcaaagtcg gacggctact taatacgcca cacacctgtt
    17281 gtaaaggctt aagtaattgt tctctggtaa tggtaatttg cataatcatt ccttcatcgg
    17341 gctaagatga taatttgcgt gttaaatgga tataatcttc ttggataccg ctttcggtat
    17401 cgcgtaattc attaatggtt ttgcaggcgt gcatcacggt agtatgatcc cgaccgccaa
    17461 attcccgacc aatttccggc aagctgtggt tggttagctc ttttgccagt gccattgcca
    17521 tttggcgagg acgggcaatg cttcttgccc gacttttcga tttaatatcg gcaactttta
    17581 tgccgtaata ttcggccaca atgcgttgaa tattttcaat cgtaatcaag taatcaaaag
    17641 aggcaaacag atcttgcaag gtttcacgca ccgcatcaac cgtaatcggg cgaagggtca
    17701 atttttgcca cgcaatcaca cggtttaatg ctccctccaa ttcacgcaca ttggttcgga
    17761 gtttttgccc cattaaatag gcggcatctt cttgcaaatc tgctccacgt tctaaggctt
    17821 tttggcgaag aattgccact cgggtttcca attcaggtgg ctcaatggtc gcactaatac
    17881 cgccgcttaa acgggattta atcgctgtgt caattttatc gatatttttt ggcaaaacgt
    17941 cagaggttag aataatctgc tttctctgct caaataaagc attgagtaga tgtaaaaact
    18001 cttcttgtac tttcggttta ttggcaagaa attgaatatc gtcaatcatt aacacatcaa
    18061 gcgagcggta gaattttttg attttttccg catcgttatt ggaactgttg atcgccttaa
    18121 taatatcacg ataaaaacgt tccaaatgaa tatatagcac ccgagtaccc ggtgtgcgtt
    18181 taactaattc attgccgata gcgtgtaata agtgggtttt gcccaaaccg gtgccggcat
    18241 aaaacgagag tgggttgcaa tggctttcgc ctaaattatc caccacttgt tgagccacta
    18301 atttagctaa ttggtttgag cgaccttgta caaaattatc aaaggtttga tttggattta
    18361 gcccggtttt aaagccggta ttgctgaatt ctgaactctc gttttttaga tttgggctga
    18421 cctttggctg ttctgtcggt ttaatcccaa cttttaacgt aaccaccaaa ttatcatttt
    18481 tcgccaaaaa acgggcaagc tcggtaattt ccgataaaaa tttatctttt acccagtttt
    18541 caacaaattg attttgtgca taaagtgtaa gttccccatt ctcagaactc gcttgcagag
    18601 gacgcagcca agtgctgtaa tcagttggtg agactttcgt ttgtaagtga ttaaggcaat
    18661 cagaccaaag ggaagacaca atttgctcca aaattattgt tattaaaggt cataatgata
    18721 cctgaaaaaa ggggagaaat cttgcaaatt tttgagagat tttatggggg cttggaagcg
    18781 attttaattg gcgaacaagc ggtcgttttt tgttgaaatc ttgcaaattg ctaacaaaaa
    18841 atgaccgctt gcttagtatg atgtgtgatg gagttgatta aatatccgta ttctccggca
    18901 agaacccacc gctttggtga gcccaaagtc tggcgtaaac accgttttga gcaagcaatt
    18961 cttcgtgcgt gccttgttca acgatttcgc ctttatctaa cacgataagt ctgtccattg
    19021 ccataatggt agagaggcgg tgggcaatcg caaccacggt tttaccttcc attaattgcg
    19081 tgagattttc ttgaattgcc acttctactt cagagtctaa cgcactggtt gcctcatcga
    19141 gtaataaaat cggagcgtct tttagcatca ctcgggcaat cgcaatccgt tggcgttgtc
    19201 cgccggaaag ttttacccct cgttcgccaa cgtgtgcatc aaaaccggtt ctgcctttgg
    19261 catcttgcag gtttggaata aattcactgg cggcagcttg ttcaacggct ttgatcatct
    19321 cttcttcagt ggcgtttggg cgaccgtaca tcaagttttc acgcacagag cggtgtaaca
    19381 gcgaggtgtc ttgagttact aaaccaattt gtgagcgaag gctttcttgg gtaatatcac
    19441 ggatattttg cccgtcaatc gtgattgaac cgtcttgaat atcgtaaaaa cgcaataata
    19501 aattggtgag cgttgattta cctgcaccac tacgcccgac taagccgact ttttcccccg
    19561 gttttatagt gaggtcaaaa tctttcagta gcggtttttt cggatcgtag gcaaaatcca
    19621 cattctcaaa tttaatttcg cctttggtta catttaacgg tttcgcatcg attttatcta
    19681 ccacattgtg tggtttggaa agcgtaatca taccgtcttg taccgtacct aaattttcaa
    19741 atagacgagc aaattcccac ataatccatt gtgataagcc tttaatgcgt aaagccaaag
    19801 cggttgaggt ggcaatcgcc cctgcagtta ctacgcttga accccaaagc cataaaccga
    19861 tacccgcagt tgaaattatt aatgccatcg aggttagatt agttacggtt tcaattacag
    19921 tcactaaacg catctgttta tgcactgtca ccataaatcc ttccatcgac tctttcgcat
    19981 aggcagattc acggttgccg tgcgagaaga gtttgacggt ggcaatgtta gcgtaagcat
    20041 cggtaattcg accggtcatt aaacttctgg catccgattg ctcttgagca gcttgggcta
    20101 atttcgggac aaagtagata atggttgccg ctaatgagat gacccataaa ataaacggca
    20161 cgaataacca gccgtcaagt tgtaataaaa tcacgctgga ggtggtgaag taaaccagca
    20221 catacaccaa catatcggca caagtcataa tcacatcacg cacggaaagg gcggtttgca
    20281 ttacttttgc agacactctt cctgcaaatt cgtcttgata gaaacctaaa ctttgcccaa
    20341 gcattaagcg gtggaagttc caacgcaaac gcattggaaa taccccttgc agagattgaa
    20401 agcgaatgct gctggcaagg taaacaaaca ccactgcaag tagggcaata aaaaacatac
    20461 cgataatcgt ccagcctttt tctgcccaaa gttctgttgg cgagtattta ttgacccaat
    20521 cgactaaatc gcccataaag cgaaacagaa ccgcttcgat aataccgaca gctgcaacta
    20581 atacggtcag tagtaagata taaaaccgca ttcctttagt ggcatcgtaa ataaaaggaa
    20641 tgagacctga ttttggagtt ttcggcattt catttggata ggtttccacc cttgcctcaa
    20701 accatttaaa cagtttttca aacataaatt tgtgatttcc gaataaaaat gcaggggcaa
    20761 atagccattt gcccccgaaa aaatgtgaaa aaattatgga ttaagtaatt tttcgtctaa
    20821 ggctaaatct tcgttgcgat ttataccaat gccggcagct aatacgttgc gggcaatttg
    20881 atgtgcttct tttaaagaat gctctttgta agagccacat tgatattcat tcagctcagg
    20941 gattgccgat acatcaggaa ttttatgtaa cgcatcttcc attgatgccg tccaagcttt
    21001 gacaacttct tctgctgaag gcgatccaat cagtgacata taaaaaccgg tacgacaacc
    21061 cattggtgaa atatcaatga tctccacttg ttcgctattg aggtgatcac gcataaaacc
    21121 ggcaaaaaga tgttccatcg tgtgaatccc acgcaccggt agaatatcaa tattcggacg
    21181 acagaaacgg agatcgaaca cggtaatggt atcgcctttc ggtgtggtca ttgtttttgc
    21241 aacacgcacg gctggtgcgt tcattttggt gtgatctact ttaaaactat ctaataaagg
    21301 cattttttac tccatcaata ttattccgca attccttgat cccaagccgg ggcttcatca
    21361 ggtagtttgc gctgtaagaa aaatcgtctg tttggctggg cttgaggctt caccacttta
    21421 gtgtaagggg tagagaactc aataccgcca tttaataact gcgacattgt gccggagttc
    21481 atacttacac cttgcaggct cacgtccata gtgtaacctg aagcttgcca gaattgggta
    21541 ttggttctga ctaagtgctt gtatttatct tgaatattga cataaataag cactcgatcg
    21601 cctaactcac ttagccctaa acggctgact attcccacct gcattccacg gtaaagcacc
    21661 ggtgcttccg gctgaatacc gttagcattg gtggtttcga caataatggg gaaaccgttg
    21721 gcataggtgg tttttaccgt atcggtatct gcaagaacaa attggttttg agcttgccct
    21781 gaaccgacat caaccgtaat gtaattttgt agtgctgcat ctaaattttt aaagccggag
    21841 gtactgattt caggcgagat aacattaaat ttactgccgg cttttgcaat taacggatag
    21901 tatttccttt gaatgtaagc ggtcgctttt atctgttttt ttgcattttg tagctcaagt
    21961 ttttcaattt gacctacggt taagcccata tatttaatgt ccattccttc gcttaactta
    22021 ctcgcatctt ttgcaatcag cgtgagataa gtattgcccg aagtggcttt ctccttactt
    22081 gcataaagcg ttttattgcc ttttgaaccg ccatcatcaa agctgatcgc cccttttaag
    22141 gtacgcatta atggagctgt agtgatattc acgcctttga gtgacacatc aacactcgtt
    22201 gccggctcaa tccagaaacg gcttttctcg gttaatagat gacgataatt tggctggata
    22261 aatagctcaa cctcaaattt ttgttgtttc ggggttattt ttaacacctc gccgacctga
    22321 aaatcacgat atagcaccaa agagccttcg ctgataccag ataatgaatc tgccgaaagg
    22381 gtagtggtgg cttttttatc taaggtagcc atgcctgatt ccgcactttc tatatcttta
    22441 taaagtgcat attgtttttt cgggctaccg tcatttttac cgttaattaa gcgaacaccg
    22501 ccttttaacc attcagatgg tgaaccggcg tgaactctta acccatctag ccccaccgac
    22561 atatcaatgt tggatatcgc aacaaatttg ctgttactcc caatcaggtt gcgataaggc
    22621 ggataaataa tgacatcaaa acgtactttg tctaactcta ggctacgttt gacgatttct
    22681 ccgatttgca catcgctata gtaaatcccc tgattggtat ctaccccata ggcttgagga
    22741 gcaattaagc taaagctaag taaattcggt aaacttaata gataatcggc ttcgttttgt
    22801 accacaaatt ccgattgagg ttctccttcc cccgggtgaa cctcaaaata gacaccacgc
    22861 agcagctcac ctactttcgt cagctgctct gtgtttaagg agaatttcgg ctctttgagc
    22921 aagattttag tttgggaacg tagtaaattt tcataacttg ggtcaattaa taaaacccca
    22981 tcaatctgtt tatgctgccc tgattcttgc tgtggcacac cgttgtcttt tacttgcggt
    23041 aattttagct gcgaaagcat accaatttgc acattttggt gaaaaacacc agtctcatta
    23101 atttttaaat tatgtgtaag cggtagtttt acgttgattt caattccacg tttagctgat
    23161 ttcaaatccg gatatagctc aaatttctgt ccttgctcgg caatttccat attatcaggc
    23221 gaatcaaaag caaccgcacc ttgtactacc gaggcaaggc tgtccatatt gattttaata
    23281 ccttgtaaat ttacatcagc gctaataccg ctaatattcc aaaatcggct ctcttttttt
    23341 actaaatgag cgtatttttg attaatgacg acatcaattt cgattttttt ctggtctttg
    23401 gtaaaacgat aatcggcaat attacccact ggcactttac ggaaataaac actcgctccg
    23461 acagtaatag agcctatgtc atcagagatt aaacggatca gtaaatcgcc atcgctcacg
    23521 gtaatagccg gaggatcttc ttctgcaata aattcatcaa cgaaatcgcc ttcaccggga
    23581 agtagggtaa tatagttacc agaaacaatc gcatctaagc ctgaaacgcc agccaaagaa
    23641 gcacttggtt gcactaacca aaatttagtc tgtttgcgta aaatactttt ggcttcaggg
    23701 tttatttctg cttgcacttc cacttctttt aaattatcga caaaataaac acgcttaacc
    23761 tgaccaatct gcaagccttg gtaacgaata gcggtttttc cggcagtaat gccatcacct
    23821 ttactaaatc gaatcgtgat tgtttcacct tgctctttta aaatttggaa aaatagcaaa
    23881 gcaccaataa taaaagcaac tattggtaac agccaaaaag gagaaatttt gcgaggctgc
    23941 cggatttggg catctacaac agtgtgggta ttttcttcca tcgtcatttt aaattaggga
    24001 aacctatata gaacaatacc gaagacccaa agggacttcg gtaatagaaa taagtcaaaa
    24061 taagaaatat tattttttct catcacagtt ggttaaatta ctgcatttac catacagata
    24121 taaactgtgg ttagtcaatt ccattccgtg tttttcactg atttcacgtt ggcgacgctc
    24181 catatcagga tctttaaatt cgaacacctt accacaatcc atacaaataa tatggtcgtg
    24241 ttcgtggttc atatttaatt cgaatactgc tttattcgca tcgaaattat ggcgggttaa
    24301 aatgccggct tcttcaaatt ggtttaagac acgataaacc gttgctaaac caatgtctga
    24361 gcctttttct aacagaatct tataaatatc ttctgctgca aaatgttgca tttcatcacg
    24421 aatatcttgc attaatgcaa ggatagtcaa acgaggctcg gttactttta agcctacctc
    24481 ttttaaacgt ttaatatttg cttcagacat atatgccact tatttatctt tatccaaaat
    24541 agttattatg cgagttggtc taagcacatt tcttctttca actgctcgca ccatttatta
    24601 acacgttcag tggttaattc aggctgacga tcttcatcaa tacataagcc gacaaaagta
    24661 tcatcatcaa ctaaggcctg agaaacctcg aaagtgtaac cggcagttgg ccaatgacca
    24721 acaatcacac caccatttgg ctctaccaca tcacgcacag tacccattgc atcacagaaa
    24781 tattctgcat aatcttcctg atcaccgcaa ccaaaaattg caacgacttt gccgttaaaa
    24841 tcaatctctt ttagggtagg cataaaatcg tcccaatcgg cttgcgattc accataatac
    24901 caagttggga tcccaaacat cagaaaatcg tatgcttcaa tatcttcttt tgtgcttttg
    24961 gcaatgtctc gaatatcaat taattcagcc cctaattttt tctgaatcat ttttgaaata
    25021 ttttctgtat tgcctgtatc gctaccgtaa aataaaccta caactgccat tgctactacc
    25081 tatttgtgag ataattattt agaattgttt caattaactg cccgcgtgaa acaccttgtt
    25141 cagacgcctg ttcctctaat aactttacta aattcgaatg cagttttaat tctacccgtt
    25201 ttaaaccgga agatttatct cgttttagtt ggttacgttt attgattcga agttgttgtt
    25261 ctctatcaag aggatttgta cgaggacgcc caacttttgg tacagtcgca aacagatcta
    25321 aggttataca atctgaatct tgttttgcca ttttgtttta ctattgggct ttagctaatc
    25381 ctcagtttta atgagaatga taagctactt ttaaagtgtg aactatatca aaagttcaat
    25441 catttgaaaa gtaaattaca ggcaaaacaa gcggtgtttt taggtttaaa atttgcaaaa
    25501 accataaatt acacattatg agttatgatt tttctgaagc gtgaaattag cttataatga
    25561 aaccgaataa cgttatgaaa aaggagatag tgtgtcgaat atccatttag cgattgccgc
    25621 tgattttacg ctggcagaaa aattacttga agcattagca aatcaagatt tagggattga
    25681 aaatatttca gccgttgagc ttgagccgtt tggtgaagag cagaatttac gctttggggc
    25741 aaaagcagtc gcacaatatg cgttagatga agtaaattgg gcggaattta gccatgttct
    25801 atttgccggc aaaatggcac aagcggaagt gttggcagaa gcggtgaaag ccggctgtgt
    25861 gattttagat ttatacggca ttaccgcact catcggcgat gtaccggtag ttgtgccaag
    25921 tgtaaatgat gaaaatgtcg caaatttgcg tgagcgaaat atcgttgctt tagccaatcc
    25981 gcaaatttca caactggcgt tagccttaaa gccattgttg aacgagccgt taaaacaggt
    26041 gtgggtaacc tcacttttac cgtctgccta ttttggcgat gaaaaagtca aggagcttgc
    26101 cggacaaact gcccgtttgt taaacggcat tccgtttgat gaaaatgcgg aacgcattgc
    26161 ctttgatgtt gtgccggcta atgtgcaagg agaagagaaa agtctgccgt tctcaaaagc
    26221 ctttgaactg caaattgcaa aagttttacc aaatttgacc gcttgtacta ccttccacag
    26281 cgtgcaagtg ccggtctttt atggggtttc ccaaatggtg tcggtgcagt ctgaatatca
    26341 gttagatgct aatgcgttaa gtgaagcttg gaaagccgaa aattggctga attttaatga
    26401 aaattcagtg attacagcgg tgaaaaatgg cgaaaacgaa gagcaaaatg cgttagaaat
    26461 cagtcagtta ttggcgaaat ccgaacagga agtgcagttc tggacggtcg ccgatgaaca
    26521 gcgtttcagt ctggcatttt tagcggtgaa attactaaaa ttagttttag cgtattaagt
    26581 gcttgcaaaa gtatttattc cgtgataaaa atcgtcaacg cccgagcaac cgattgcttg
    26641 ggcgttgtca ttttgtttaa acaccgaagg tcttatgtta gaaaaattat ttcagctcaa
    26701 agcaaaaggc agtaatgtaa aaaccgaaat tatcgccggt attactacct ttttcacaat
    26761 ggtttatatt gttttcgtca atccgtctat tttaggcgtg gcgggaatgg acacccaagt
    26821 agtgttcgtg actacttgtt taattgccgc ttttggtact atcgcaatgg ggttattcag
    26881 taatttaccg attgctcttg caccggcaat gggcttaaat gccttttttg cattcgtagt
    26941 ggtgcaaaaa ttaggttact cgtggcaagt gggtatgggg gcgattttct taggctctgt
    27001 cggcttattc ctattaactg tattacaagt tcgttactgg tttatgtctg cgattccact
    27061 tggtttacgt gtaggtattg gtgccggtat cggtttattc attgccctaa tcggttttaa
    27121 aaatatgggc ttggtggtgc caaatccggc aacgcttgtg gcactaggtg atttgcacga
    27181 cccgaaagtg ttaatgggga ttttaggctt tttcatcatt gttgtattag cggcgaaagg
    27241 tattcactca ggcgtgttaa tttcaattgt gattgttacc gctcttgcct tagcctttga
    27301 cccggcggtg agctttaacg gcataatgtc tatgccacca agccttgggg cagttgtggg
    27361 gcaggttgat attgccggtg cttttgatgt tgccttactc gggatgattt tctcctttat
    27421 gttggtaaac ctgtttgact cttccggcac cttaattgcg gtgactacca aagcaggctt
    27481 tgcggatgaa caagggcgtt tcccgaaaat gaaacaagct ctgctagtag atagtaccgc
    27541 tgcaatggca ggctcttata tgggaacttc agcgatttct acctatattg aaagtggctc
    27601 cggcgtttca gttggcggtc gtaccggctt aactgcggtg gtagttggga tcttattcct
    27661 attaaccatt ttcttctcac cacttgcagg gttagtacct gcctatgcaa ctgcgggggc
    27721 attggtattt gtaggaattt taatggcatc tagcttaatt gaagtaaaat gggacgattt
    27781 aactgaagct acgccggcat ttattactac cgcaatgatg ccgtttactt actccatcac
    27841 tgaagggatt gcattcggct ttatcagcta ctgcgtaatg aaagccttta cagggcgttg
    27901 gaaagaaatc aacctttctg ttttagtggt ttcacttctc tttattgcta aatttgtgtg
    27961 ggtgggttaa gctctacccc ccctctccct gatttttctt ctaaacgaag aaaaatctat
    28021 ccctctccca caaaggggag agggtatttg attcattatc tatgtgtttc gtgtattccg
    28081 aggtaaaaca atgtctaatt cagttcaaaa acttcttttt atcatcaatt ctgctcctta
    28141 cggcaatgaa acgtttttca gtgcgttgcg tttggcatta caaattcaag aacaacataa
    28201 agccaatacg gaaattaaac ttttcttaat gtcggatgca gtcaccgcag ggctggcaaa
    28261 gcaaaatccg gcagagggtt atcatattca gcaaatgctg gaaattttaa ccgcccaagg
    28321 ggcaaacgta aaattatgca aaacctgtac taatgctcga gggattacag atttgccttt
    28381 agccgatggg gtagagattg gcacattaat tgaactggca gattggacaa ttcaagcaga
    28441 taaggtactg aatttttaat gcaaaatatt gatgttgtgg tgattggtgc cggtgcggca
    28501 gggctgtttt gtgctgccca actggggcaa gctggcaaaa aagtggtggt gttagacagc
    28561 ggtaagaaag tcggacgtaa aattttaatg tctggcggtg gtttttgcaa ttttacgaat
    28621 ttagacgtaa gtgccggaaa ttaccttagc caaaaccgcc attttgtgaa atccgccctt
    28681 tcacgttata cccaatggga ttttatttcg cttgtcagcc actatggcat tagctatcac
    28741 gaaaaagagc tagggcagtt gttttgtgat gaaagctcgc aacaaattgt cgatttacta
    28801 caagcagaat gcaacaaagg caaggttgag attctgttac ggcaagcggt catttctgtg
    28861 gaaaaagttg caaatttttt tgaaatttcg accgcttgtg gcaagttcca atccgaacac
    28921 ttagtgattg caaccggagg gctttcaatg ccggctctcg gggcaagccc ttttggctat
    28981 caacttgccg agcagtttgg tattcctgtt gtgccaccac gtgcaagcct tgtgcctttt
    29041 acttggaaag agagcgataa atattttgcc gagctttccg gcattgcact gccgattact
    29101 gtttccgcca atggcaaaag ttttagcaat cagatgttgt ttacgcacag aggcttatcc
    29161 ggcccggcaa ttttgcagat ttccaattat tgggaattgg gggaaacggt agagattgat
    29221 ctgctacctt cgcagtccat taccgatata ttgagcgaac tacgccaatc ttcgccgaaa
    29281 ttacagctaa aaaccgtatt atctcgttat ttacctaaaa aattggttga agtttggctg
    29341 gaacagaaat tgctgaccga taaagtgatt gccgatttga gtaaaaaaga tctgacctta
    29401 ttagagcaat ttatccacca ttggcatttc ttgccaaacg gcacggaagg ctatcgtaca
    29461 gcggaagtaa ccaaaggcgg tgttgatacc gactatattt catctaaaac gatggaagcg
    29521 aaaaatacag cagggcttta ttttatcggc gaagtgctgg atgttaccgg ctggcttggt
    29581 ggttataatt tccaatgggc gtggtcatct gcttttgcct gtgcagaagg gattattgaa
    29641 aaaagcaaat aactaaaaaa gcaaataact aaaaaaccaa acaaaaaggc gaacacaatt
    29701 gttcgcctta ttttatgctg aattatcttg cacggaaaat aatgcgtgct ttgcttaaat
    29761 cgtatggagt catttcaacc gttactttat caccggttaa aatacgaatg tagtttttac
    29821 gcattttgcc tgaaatatgt gcggtaacaa tatgaccgtt ttctaattcc acacggaaca
    29881 ttgtatttgg taaggtttct aaaatcgtac cttgcatctc aatgcaatct tctttagcca
    29941 tttattcctc tttaaagttt taatttttat atgatgccat tcggcgaaaa acggcggata
    30001 ttatacgctt attcgctcaa attacaatcg tttatccatt tgagtgtaaa ctatttacgc
    30061 ttaatccaac ggcgacgtga gtgaaaacgc tgggtttggg tttttacttg actcataagt
    30121 ggttttgggc ttatctgtac atgatgaatt ttacgacgaa aatagtagtt aatgctactt
    30181 gccaacaata tacctgtgag tagcaaaata attatttccc cataaagttg atgaaattgt
    30241 tgctctactc gtgctttagt agtttgccca tattctgcat caaacgtgac gcgtaaaaag
    30301 ccaaccaacg cctgttgaga aaatattggc tcaacaattt gctgagtttt ggcagattgc
    30361 tctgaatcga gcaatacttt taaatctttc gcattttggc tttgagccag tagcacgcca
    30421 tttggtgaat agatattggc atcaataata aaatcttctt tggcaaaact atccaacgca
    30481 tcaaccagct catcggtttt ggcattttta actaacaaaa acgaaaaaat atttgcttgc
    30541 tggcgaacca ataggtgtga aaggtttgat acttgattaa tgctggccaa ttgtgagcct
    30601 agcttaaatt ggtttacgcc cattaaaata accgccacga tcccacagca gagtagcgta
    30661 atccctgcca gcaaaagcgt tttcgttatt ttttcacgac taatgtacat cgaaattccc
    30721 tcaaaatgat gcgtgattgt agcacgcttt tctgttagat tagtgcagta aatttaaaca
    30781 acctaaaata agacaatgac aaacacaatt tttatctatt caaaaacctt aaacgagcgt
    30841 gaaattgaac agttttcaca acaaacggca gcaattttgc tgaaacaagc ggtctattta
    30901 gactacaaaa ttgcattttt ttccacaaat ttaaccgctt gcgagctgcg tgaaacggca
    30961 cagaaaatca atgcggatat tagcgatctc actattattc caaccttaaa ccaaggcggt
    31021 ttgctattaa tggatatgga ttccaccgct attaaaattg aatgtattga tgatattgcc
    31081 aaacttgccg gcaccggcga ggtggtgtcc gccattactg ccagtgcaat gcggggcgag
    31141 ctggatttcg agcaaagttt acgcaagcga gtcggcacgt tggaaaatgc atcggaaagc
    31201 attttgcaaa aagtgcggga aaatctaccg cttatggacg gctttgagca gatggttgct
    31261 attcttaagg aacacggctg gaaattagcg attgcgtccg gtggatttga ttacttcgcc
    31321 gattacttaa aacaaaaata cgggttgaat tttgcggtct ctaaccaact ggaaattatt
    31381 gacggtaaat taaccggcaa ggtgttaggc aaagtagtgg atgctcaaca taaagccgat
    31441 accttacaga atttagcgac aacctttaat attccaccaa atcaatgggt ggcagtcggc
    31501 gatggggcaa atgacttacc aatgttaaaa accgccagtt taggcgttgc tttgcacgct
    31561 aaaccaaaag tgcaagcaca agctgatttt gtggtaaact tcggggactt aacggcatta
    31621 tgtttattac ttaatgccaa tcatttattt caacattaat tgagaggaac aacaatgcca
    31681 tcatttgata ttgtatctga aatcacgatg cacgaagtgc gtaatgcggt agaaaatgcc
    31741 aatcgtgtat taagcacccg ctacgatttc cgtggggtgg aagccgttat tgagttaaat
    31801 gaaaaaaatg aaagcattaa gctcacgacc gaatcggatt tccaattaga gcagttaatt
    31861 gagattttaa tcggctcttg tgtaaaacgt gggatcgagc atagttcatt agatatccct
    31921 acagaaagtg agcatcacgg taaactctat tccaaagaaa ttaagctcaa gcaagggatt
    31981 gagtcagata tggcgaagaa aattaccaag ctgattaagg attctaaaat caaggttcaa
    32041 gcccaaattc aaggcgagca agtgcgtgta acgggcaaat ctcgtgatga tttacaagcc
    32101 gcaattcagc tagtgaaagg ggcagattta gggcagccat tccaatttaa taatttccgt
    32161 gattagcaat tcctgcaatt aatgatgaca agtggaaaaa ttcagcaaaa tttgaccgct
    32221 tgcattaata attcaacata aaaggaagag atgatgagcg agcaaacaga aaagaaaggc
    32281 tggtttaaaa aagcccttga gaaatatgat gccttttgcg atgagctagg ggtaaatcaa
    32341 ggtgcttgcc gaggttgtgt ccctgtggtg aagtttgacc ctgaaccgga aaaagagcag
    32401 ccagaaaaat cagaaaataa aacatagaaa aaatgcacaa tggtaagata cattgtgcat
    32461 tttttatagg atttttaatt ggcgtgatga tgggcaaaat attgcttaac tccgccatct
    32521 ttcttgcaag gattctgaat atcagtagag taactaccgt taaaacaaag agcagtagca
    32581 ttcgatggtt taatcttttc ctgtttagtt agggctggcg gttgagtatt ggtttcacta
    32641 atatagatcg ttttaggttg agaatagtct atatttttgt cgccatttac gacttgaacg
    32701 ggggtgttcg agctgcaagc tacaaccgat gctgaagcca atgtaagtat aatgatatgg
    32761 tgttttttca tgggtaattt ccgtttttat atttttaatt gagagaatgt taaaaagggc
    32821 tgatttctca acccttaaag ttatgcctta agcattttta ttaaaagttt gtcctaactg
    32881 aatttcatca tttaatacag gaattaactg ctctagttga tctttttcaa attcgctgag
    32941 attgccgata ggtagaactt tttccacacc atttgtacct aaacgaatcg ggtaagcaaa
    33001 gaatgccgga gaggtttcgc cattggcatt atctacataa gcataacgaa tgacatcttc
    33061 cccgattaag gctctcacta aaccaagtgc aaattctgct cctgcttgag ccatagataa
    33121 ggttgctgag ccaccacctg cttttgcctc aaccacttca gtaccggcgt tttggatacg
    33181 atgagttaat tgctcgattt gttcttgagt gaactcaagt tttaagccat ttactgttgc
    33241 ttgtgaaagc agtggaagaa tagttgtgcc ggaatgtccg ccaatcacag gcactcttac
    33301 atatttcaca tttacgtctt tcgcttcagc cacaaaggta ttcgctcgaa taacatctaa
    33361 tgttgtaaca ccgaaaagtt tatttttgtc atacacaccg gcttttttca atacttctgc
    33421 cgcaatcgga ataatggtgt ttaccgggtt agtaataatt gcaatgcaag ctttagggca
    33481 aactttcgct gctttttcga ctaagttatg cacgatagtg gcattcgtat tgaataaatc
    33541 ggcacgtgtc atccccggct tacgggcaac accagcagaa ataacgacca catcggcatc
    33601 ttttagtgcc tcagtcggat cttcacctgc aaaaccggtt acttttacat cagttggaat
    33661 atggcttaaa tccactgcaa ttcctggagt aacaggggaa atatcgtaaa gagataattc
    33721 agatttagcc ggtaaattga gttttaataa taaggcgagt gattgaccga ttccacctgc
    33781 agcacctaaa agggcaactt ttttactttg acacataaaa tttctcctaa atgttatgga
    33841 agtttagacc aatttagtct aagccaattt tttgggcgat tcaaacggca aatctcattt
    33901 ttgagacata gagcaaattt ttagctgatt tttatgggtt ttattgattt atttgcataa
    33961 ataagcaaga attatgaata tttttaagtt tttgtgaata agagtgtgaa agtggacaag
    34021 atagatagtt tatcagaagc gtttaaatcg ctgttaaagg aagaaaaatt cggctcgcaa
    34081 agtgaaattg ttgccgcact acaagagatg ggctttgata atatcaacca atccaaagtt
    34141 tctcgaatgt tatcaaaatt tggtgcagtc agaacccgta atcctaaaat ggaaatggtg
    34201 tatcagctac cagtcgaatt aagtgtaccg actacctcca gcccacttaa aaatttggtg
    34261 gtagatattg atcataatga tgcgttaatt gtggtcaaaa ccagccccgg tgcggctcaa
    34321 ctgattgcac gtttgctcga ttcaatgggt aaagccgaag gtattttagg cactattgct
    34381 ggcgatgata cgatttttat aacgccggta cgcaatgtgc aaattgaaaa attggtgaag
    34441 aatgtgacac agttatttga aacatcatta tagaataagt aaaggaggac ttaatgttct
    34501 ccttattttt taggagatta ttatgcacat ttttataaca ggtggtacgg gttttattgg
    34561 gcgtgaatta atccagcaat taaaatctga aaatcaccac tttacacttc ttactagaga
    34621 tacagaagcg aaaagtgatg atttacagat taattattgc tattcacttg atgaacttgt
    34681 tgatttaaat gattttgatg cagtaattaa ccttgccggt gagccgattt ttgataaacg
    34741 ttggacagac gaacaaaaac agaaattgat tgaaagccgg gttaacctaa cgaataagct
    34801 cagtcaatta atgaatgcaa gctctaaccc tccgcatact tttctctccg gttcggcaat
    34861 cgggatttat ggcgatttgc ctccttctgc aaatttttat acagaatcga ccgcttgtta
    34921 tcaagattgc tttaccaacc ggctttgcca acagtgggaa gccgctgcac taaaagccgc
    34981 aagtgataaa acccgagtgt gtttaattcg taccggcacg gtattttcgc ccgaaggcgg
    35041 agcattaaag aaaattttac cgctttatcg atgcggatta ggcggaaaac ttggttcagg
    35101 caaacaatat tgggcgtgga tcagccgccg ggatcacgta caagcggtca tttttctgct
    35161 caaaaatgca aattgttcgg gtgcttataa ttttgttgca ccaaatccgg tgagaaatga
    35221 agaatttaat cgtattttag cgaatgctgt taatcgcccg gcattcttta ctgtgcctga
    35281 atttgccttg aaattaggct taggcgaacg agcttgttta gtcttagata atcaacagct
    35341 cattccggaa aaactactcg cagccagttt tgtattccaa gatccgattt taaccgagaa
    35401 cgttttctta aacccataat ttaggctata atgctgtata aaagcacaga ttaaaaggtg
    35461 attatggatt tctcattatt attagacggt ttaaatgaca agcagaggga ggcggttgct
    35521 gccccgattg gtaattattt agtgttagcc ggggcgggtt cgggcaaaac tcgggtttta
    35581 acccatcgca ttgcgtggct gattggggtg gaaaatgtgc cggaatccaa tattctggct
    35641 gttaccttta ccaataaagc ggcggcggaa atgcgacatc ggattgagta cactctttcc
    35701 caatcgggcg ataatcgatt gttcggaatg tgggttggta ctttccacag cattgccaac
    35761 cgcttacttc gttcccacta tttagatgcg gatttaccgc aagatttcca aattatggat
    35821 accgaagatc agcaacgttt actcaaacgt ttactgaaac tgcataatat tgatgagaaa
    35881 cattttccgc caaaacacgt tgcgtggtat atcaacgccc aaaaagataa aggcaaacgg
    35941 gcaaaagata ttgatcacta taacgatccg aatgaaaaaa aattggtgga gatttaccaa
    36001 atctatcaag atgcctgcga ccgagccggt ttgttagatt ttgccgagct gttgattcgg
    36061 gcttatgaac tattcaaaac caaatcaacc attttgcaac gttatcaaca acgttttcag
    36121 caaattttga ttgatgagtt tcaagacacc aacaatattc agtacgactt aattcgtttg
    36181 cttgccggcg atgtcggcaa agtgatgatt gtcggcgatg atgatcagtc tatttatggt
    36241 tggcgtgggg cacaggttga gaatatccaa cgtttcttaa atgattatga caacgctcaa
    36301 accattcgct tagagcaaaa ttaccgctct accggcaaca ttttaagctg tgccaatgaa
    36361 ttaattgcca ataacgataa ccgcttaggc aaaaatttat ggacagatag cggtgatggc
    36421 gagcctgtgg atatttactg tgccttcaac gaacttgatg aagctcgctt tgttgcctcg
    36481 caaatcaagc aatggaaaga agacgagggt gatttggcgg aatgtgcggt gttgtatcgc
    36541 agcaacagcc aatctcgtgt gattgaggaa gctttaattc aagcgaatat tccttatcgc
    36601 atttacggtg gaatgcgatt ctttgaacgc caagaaatta aagatgctct ggcttattta
    36661 cgcttaatcg ccaatcgtca agacgatgcg gcgtttgaac gggtgatcaa cacgccaacc
    36721 agaggcattg gcgatcgtac cttagacaca ctccgtcaaa ttacccgtgg tcgccaaatt
    36781 acgctgtggc aagcaattca agtggcggtg caagaagaac aactttcagg gcgtgccact
    36841 tcttccttat tgcgttttgt agagctgatt aatgctcttg atcaagaaac cgagcagatg
    36901 tcgcttgccg aacaaaccga ttttgtgatt aaaaaatcgg gtttatatga aatgtataag
    36961 caagaaaaag gcgaaaaggg cgaagttcgg attgaaaact tagaagagtt agttaccgca
    37021 actaagcagt ttgtgaaacc tgacgaagcg gaagagctga ccgatcttac cgcattttta
    37081 acccacgcct cacttgaggc tggagaagcc caagcctcgc aacacgaaga ttatgtcgaa
    37141 ctgatgacgc tacattccgc caaaggattg gagtttcccc gtgtgtttat tgtgggcgtg
    37201 gaagaaggga ttttcccaag cggaatgagc tttgatgaag gcaggttgca agaagaacgc
    37261 cgtttggctt atgtcggcat aacccgagct aagaaaaaac tgacgattag ctatgccgaa
    37321 tcaagacggc tttatggtaa agaagaacgc cacgttccgt ctcgctttat tgctgaatta
    37381 cctgaagagc atattcgaga agtgagattg agaggctcaa ttaaccgagc ggcaagtttt
    37441 aaccaagcta attcatttgc aaaaaatccg acaaaaacga ccgcttcctt tttaaacgat
    37501 gatacttgga aaatggggca gaaagtgaac cacgctaaat ttggacaagg cacgattatt
    37561 aatgtggagg gctcaggtga agccacccgt ttgcaagttg cctttgtcgg caacggcatt
    37621 aaatggctga ttgccaaaat ggcaaattta gagaggattt aggcgaataa aaagtttttt
    37681 gcaggaatat agatggcgag atatattgcc ccttaacctt aaactaaggg taaataaaat
    37741 taaataatgc aagctagata taa
//
LOCUS       DANLXD010000009        35246 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.009, whole genome shotgun sequence.
ACCESSION   DANLXD010000009 DANLXD010000000
VERSION     DANLXD010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 35246)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35246)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35246
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.009"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            83..1105
                     /locus_tag="PXD18_000365"
     CDS             83..1105
                     /locus_tag="PXD18_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL6300833.1"
                     /translation="MANGTSRNRRSSGRVTLADVAKVVGVGQMTVSRALRTPEMVSEP
                     LRKRIEEAIIELGYIPHFSARQLASAESHNLVIVTTSISSTENTLILSALRKSVADSA
                     LQMVILIADQESWFQELINHAPQAIVFLNLDCPPNVREWIKNSNIPTVEIGAIKKEPI
                     HLSVGIDSHEAMEKMIHFLVKKGYREIGLLSAKQDLSIFKQYLESWHTTLFAHHISPL
                     KIHHVVEDISFSAGATLLTEALLNWEAIDALVFLSDELACGALYEALRRHMSIPKDLA
                     IAGLGGLEVGSISYPKLTTIAIPYEQMGKIAGKQLLTLLSGKTLSAEEMIVKLPTKLV
                     IRDSAA"
     gene            1218..1631
                     /gene="secE"
                     /locus_tag="PXD18_000366"
     CDS             1218..1631
                     /gene="secE"
                     /locus_tag="PXD18_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HDL6300834.1"
                     /translation="MATEIKTKTPEQVEQKGGKSKGANTALWLVAIVFLAVAAVGNAY
                     FSSHFSLIVRVLLLVVLLVGAVALAAITNQGQKAIHFIKESRTELRKIIWPTRPEATQ
                     TTLIVLAMCVVVSLVLWGIDSIIVALITFVTSLRF"
     gene            1633..2196
                     /gene="nusG"
                     /locus_tag="PXD18_000367"
     CDS             1633..2196
                     /gene="nusG"
                     /locus_tag="PXD18_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HDL6300835.1"
                     /translation="MSEVEVKENGSKRWYVLQAFSGFENRVAVTLREYIKLHKMEEQF
                     GEVLVPTEEVVENVGGKRRKTERKFFPGYVLVEMEMNDDTWHLVKSVPRVMGFIGGTA
                     DRPAPITKREADRILNRVQETAEKPRHRKEFQPGESILVTEGPFADFSGTVEEVDYEK
                     GRLKVSVSIFGRATPVELEFSQVEKQS"
     gene            2429..2857
                     /gene="rplK"
                     /locus_tag="PXD18_000368"
     CDS             2429..2857
                     /gene="rplK"
                     /locus_tag="PXD18_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006121495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HDL6300836.1"
                     /translation="MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNA
                     RTESLEKGLPIPVVITVYADKSFTFVTKTPPAAVLLKKAVGIKSGSGKPNKDKVGTVT
                     QEQIRQIAETKAADMTGATIETKMKSIAGTARSMGLIVEE"
     gene            2862..3551
                     /gene="rplA"
                     /locus_tag="PXD18_000369"
     CDS             2862..3551
                     /gene="rplA"
                     /locus_tag="PXD18_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HDL6300837.1"
                     /translation="MAKLTKKMKAIKAGVDSTKAYDINEAVEVLKKFATAKFVESVDV
                     AVNLGIDSRKSDQNVRGATVLPHGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAE
                     QIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQ
                     IRYRNDKNGIIHTTIGKADFSAEQLKDNLNALLAALTKAKPTTAKGIFIKKVSISTTM
                     GAGVAVDQASL"
     gene            3613..4032
                     /locus_tag="PXD18_000370"
     CDS             3613..4032
                     /locus_tag="PXD18_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300838.1"
                     /translation="MLRLLSFCFIFLLSACTVLPQIKQLPPQVESVKSFKVENNGQQS
                     LLLIQFYENKWRWIQTDPLGAPIARVWLTKKGWEPDGFVMPNKQAQLLFTALVNALNP
                     HSPPFYLDKGWKIEREKSQFTIWLPDSSKWKVEILGE"
     gene            4119..5341
                     /locus_tag="PXD18_000371"
                     /pseudo
     CDS             4119..5341
                     /locus_tag="PXD18_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005544283.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
     gene            5334..5738
                     /locus_tag="PXD18_000372"
     CDS             5334..5738
                     /locus_tag="PXD18_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005557532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehydratase"
                     /protein_id="HDL6300839.1"
                     /translation="MHKFTFPIEQIAPLVPHSGNMILLDRITAFGEDFLTAETNIRPD
                     NPLIKHGKLATYASIEIMAQAGEPVRLGYLLGTRKLHLHRQEIPIGSQLQIQIKMSIQ
                     DATGFGVFDCQLIDLADNQVLLEGALNVFSPK"
     gene            5838..7271
                     /locus_tag="PXD18_000373"
     CDS             5838..7271
                     /locus_tag="PXD18_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA binding domain-containing protein"
                     /protein_id="HDL6300840.1"
                     /translation="MQEAYDIQHLCTRKEDKSFDRKSARKEPKEILRHLIGFANADGG
                     LLVIGIEDNGEITGFNYQKAHQPEEFIHALHNLQKMPIPVTYQQIEVVNSRGLADFVL
                     LFEVTASSGRVITSHDDRVFLRSKDQTLELNFEQRLQLEYEKGQRAFEEQPIARADFT
                     DLDMDLLEQYRQKLHTDRSIEEILKARDLINKEGQITNACILLFGNNPTRYFPNARLR
                     FLRYEGKAPLTGRTFNVVKEFMLEEPIPKLLESAKAVLKSQLREFQRLDENGQFTKID
                     EYPEFAWLEGIVNAIAHRSYSNQGDCIRISMFDDRLEIFSPGGLPRPVTLENMYYTRF
                     SRNPKIARVLYEFGWVKELNEGVNRMAEEMNAYQLNTPSYFEPNENAVRLILENNIEH
                     RTLRALERIEEIFTQDIMATLNKNEVTILQYLYENEMITVKIASEILDRSKELSRRIL
                     KSLEQKNILTWHGLSPKDPTQYYTLKR"
     gene            7285..8013
                     /gene="fabG"
                     /locus_tag="PXD18_000374"
     CDS             7285..8013
                     /gene="fabG"
                     /locus_tag="PXD18_000374"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012771807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDL6300841.1"
                     /translation="MNNTVLITGSSRGIGKAIALTLAQQGFDIVVHCRSRVEEAEAVA
                     QAVRNLGKNARVLQFDVADREKVRSILEADVEQHGAYYGVVLNAGLTRDNAFPALTDE
                     DWDSVLRTNLDGFYNVLHPIMMPMIRRRKAGRIVCITSVSGLIGNRGQVNYSASKAGI
                     IGAAKALAIELAKRKITVNCVAPGLIDTDILDENVPIEEILKMIPAGRMGDPDEVAHA
                     VAFLMDEKATYITRQVIAVNGGLC"
     gene            8076..9221
                     /locus_tag="PXD18_000375"
     CDS             8076..9221
                     /locus_tag="PXD18_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014167571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HDL6300842.1"
                     /translation="MKRVVITGIGVVTAFGKEWAEIHGYQPPKHWNRKQLRSLGRVSQ
                     FVVEASERALAQAGLLDENGVIFDWLKDRRMGVACGSSTGSTNDIKDAAELLMTGKSD
                     GFNANTYVRMMPHTTAANIGIFFGLTGRIIPTSSACSSGSQGIGYAYEAIKYGMIPMM
                     LAGGGEEFCASKVYVFDSLYAASRRNDNPKGTPRPYDKDRDGLVIGEGAGMFVLEELE
                     HALARGANIIAEVVGYGANSDGSHVTRPQATTMQRCMELALKDAGIQPNQVGYVNGHG
                     TATEQGDIAETQATTAVFGKIPLSSQKSYLGHTLGACGALESWFSIEMMRDGWFAPTL
                     NLENVDERCGDLDYLQGDGREIHTDYVMNNNFAFGGVNTSLIFKRWK"
     gene            9235..10140
                     /locus_tag="PXD18_000376"
                     /pseudo
     CDS             9235..10140
                     /locus_tag="PXD18_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251927.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dialkylresorcinol condensing enzyme"
     gene            10163..11305
                     /locus_tag="PXD18_000377"
     CDS             10163..11305
                     /locus_tag="PXD18_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HDL6300843.1"
                     /translation="MLSNVYITNTSAFLPNAPVSNDAMEAVLGMVGETPSRVRKMILR
                     SNGIQHRYYAIDPITRQATHSSTELAVQAVKKLGNSATSATCLAVGTSYPDQIMPGQG
                     VMVHGLLDAEPMEVLTTAGVCVAGMAAMKHAYNAVRIGEHRAAIATASETASAIMRSE
                     HFRAEIDHKKLDDARPEIGFEKDFLRWMLSDGAGAVLLANQPNEKGLSLKIHWIDLVS
                     YANEMPVCMYAGAEFIDGNYTGWKAMSEAQRAECSAMAVKQDVKLLNENIVKYTVEKA
                     LERIIPKYKLNAEEIDYFLPHYSSGSFRDKLLEGLQRINFLIPQEKWFTNLTTKGNTG
                     SASIYIMLDEFIRTHDLKQGQKILCYVPESGRFSSCFMLLEAVVNS"
     gene            11354..11569
                     /locus_tag="PXD18_000378"
     CDS             11354..11569
                     /locus_tag="PXD18_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDL6300844.1"
                     /translation="MDINDIPQDNSKIFNGERKVIYARNPQPEIRQMISSILACYAWD
                     ENNPFVAKSDARLKALAEVVGKAEIGD"
     gene            11850..12341
                     /gene="rplJ"
                     /locus_tag="PXD18_000379"
     CDS             11850..12341
                     /gene="rplJ"
                     /locus_tag="PXD18_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HDL6300845.1"
                     /translation="MALNLQDKQAIVAEVNEAAKGALSAVVADSRGVTVEKMTELRKA
                     AREAGVTMQVVRNTLLRRAVEGTEFECLTDTFTGPTLIAFSNEHPGAAARLFTEFAKT
                     NKEFELKGAAFEGKKQDVAFLATLPTYEEAIARLMGTMKEAAAGKLVRTLAALRDQME
                     AAA"
     gene            12400..12768
                     /gene="rplL"
                     /locus_tag="PXD18_000380"
     CDS             12400..12768
                     /gene="rplL"
                     /locus_tag="PXD18_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HDL6300846.1"
                     /translation="MSLTNEQIIEAIASKSVSEIVELITAMEEKFGVSAAAAVAAAPA
                     AGAAAAEEKTEFDVVLAEAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGISK
                     AEAEALKKELEEAGAKVEIK"
     gene            complement(12875..13705)
                     /locus_tag="PXD18_000381"
     CDS             complement(12875..13705)
                     /locus_tag="PXD18_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDL6300847.1"
                     /translation="MVQKPLNHYLEMQEHFLYVPYLHHHRRIRVLLPKDYHNEGWERY
                     PVLYMHDGQNVFYSKESYSGHSWKIIPTIKSHQELPKMIIVGIDNAGANRLNEYGPWK
                     TTTGSTPETRNAGGLGEEYAKWVVETVKPFIDIHYRTKPQQEHTLLAGSSMGGIITAY
                     MGSRYPHIFGHLGVFSLASWFSEPDFLRFTHQYPLQPNTKVFIQVGTNEGDEIDSHFI
                     SNTNQTYIDCSLNYYQALIRIGVPLDNIRLRIMANEIHHEMHWADHFVEFLHFSLLRK
                     "
     gene            13931..15472
                     /locus_tag="PXD18_000382"
     CDS             13931..15472
                     /locus_tag="PXD18_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjI family glycine radical enzyme"
                     /protein_id="HDL6300848.1"
                     /translation="MQASLQDILEVVKAKNLTYQQKLMSLGNIAERLFNPIELLGYTE
                     EEWEHIENQMICDLNEGYAIYRPRYILPDYNVYMQKGCQFLDLPPPTNLDEALDGLLI
                     LYSHVPSITTFPVYIGRLDQLLEPFITDEEQDYIKIKRFLNHIDKTISDSFCHANIGP
                     NDTKAGRLILKAVIELENITPNMTIRYDKTKTSREFAELAAKACLLVSKPSFANDAYY
                     IQDLGEEYGIASCYNALPECGGAYTLTRLRLGTIGRACASVEQMVNEMLPKVAKLALS
                     TMDKRHKFLVEESNFFESSFLVQEGFIKRTNFTSMIAIVGLADAVNHLLKQEGLNETF
                     GQSKRGDEIATLIMDKLQAVNDAHKGLYVERTNNQYLLHAQVGANNHAEDKMNTPAHR
                     IRVGEEPTLLAHLKQSAPFHKYFPSGTGDLFAFDQTYTDHLDAVVDIIDGSFAQGYRY
                     ITTYLKNTDLIRVTGYLVKKSEVERYRKGEAVLRDTTWYGSGTDDCAKVFDRQLRDEE
                     NVNAG"
     gene            15475..16263
                     /locus_tag="PXD18_000383"
     CDS             15475..16263
                     /locus_tag="PXD18_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S cluster-binding domain-containing
                     protein"
                     /protein_id="HDL6300849.1"
                     /translation="MAALSEIFVPLHRIIPFSNVEGQGNRTSIFLQGCKLNCLYCHNP
                     ETIPRYSKEAKQVSLQYLYDQVMEAVPFIRGVTISGGEPTIHHKKLVPLFEALREQGL
                     TCYLDSSGFFDFEATEPLINVTDKFLFDLKGDGAGLQTLCFDRKNQAGKVPEQALPNV
                     NHIKPENLARNLQNLAKLLPLDKVEEVRLVYLNEFYNAHHLLEKVADLLKPYPDVLLK
                     IIRVHTKGARDETGLARFVPTIEQTDELAAFAKRHGIQKVITIY"
     gene            16276..17533
                     /locus_tag="PXD18_000384"
                     /pseudo
     CDS             16276..17533
                     /locus_tag="PXD18_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005760733.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
     gene            complement(17612..19621)
                     /locus_tag="PXD18_000385"
     CDS             complement(17612..19621)
                     /locus_tag="PXD18_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL6300850.1"
                     /translation="MSAENMPSVIRFEQAVAKKDYESACTELLSILSKLDSNFGGISN
                     IELNMPEQIENLENDKAIYFCTRMAVAITRLFEDPALEISEHGAMRFLTLQRWIALIF
                     ASSPYVNADHILRTYNRNKESANPNTVDLDATLQALIKFCILYLPESNILLNLDAAWN
                     ASSDLTASLCFALQSPRFIGTSSAFAKRAAILQWFPEKLAQIENLNKLPSAISHDVYM
                     HCSYDIEANKHNVKRSLNAVIRRHLLSVGWEDRKIEQLGTRNNKPVMVVLLEHFHSSH
                     SIYRTHSTSMVAAREHFHLIGLGSDAVDEMGQQVFDEFHLLPQDGSLFDRLSFLKDIC
                     DKNNPAVFYMPSIGMDLTTIFASNTRLAPIQAVALGHPATTHSDFIEYVIVEDDYVGS
                     ESCFSEQLLRLPKDALPYVPSALAPQNVVYNLRENPEVIHIGIASTTMKLNPYFLEAL
                     KAIRDRAKVKTHFHFALGQSSGITHPYVERFIKSYLGNDATAHPHSPYDEYLNILHNC
                     DMMLNPFPFGNTNGIIDMVTLGLVGVCKTGPEVHEHIDEGLFKRLGLPNWLITQTAEE
                     YVTQAIRLAENHEERLAIRRDIIENNKLQTLFSGDPRPMGQIFLAKVQAWLADKNSKN
                     AEVEVKTKKVRKAATASQSAKKQTTSKTQTAKAEKDNTAKTETKS"
     gene            complement(19631..20968)
                     /gene="rimO"
                     /locus_tag="PXD18_000386"
     CDS             complement(19631..20968)
                     /gene="rimO"
                     /locus_tag="PXD18_000386"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HDL6300851.1"
                     /translation="MSASPNIGFISLGCPKNLVDSERILTELRADGYNIIPSYENADL
                     VIVNTCGFIDSAVQESLESIGEALEANGKVIVTGCLGAKENQIREVHPKVLEITGPHS
                     YEAVMNHVHKYVPKPEFNPYTSLVPKQGIKLTPKHYAYLKISEGCDHRCTFCIIPSMR
                     GDLASRSIVQVLDEAKRLVDAGVKELLIVSQDTSAYSLDRKKEEATKTVFWNGMPIKS
                     NLITLCEQLGSMGVWVRLHYVYPYPHVDDLIPLMAAGKILPYLDIPLQHASPKILKAM
                     KRPGSIERTLERIKKWREICPELTLRSTFIVGFPGETEEDFQLLLDFLKEAQLDRVGC
                     FKFSPVEGAVATDMPDQVPEEVKEERFHRFMQLQQEISAARLQAKIGKTVQVIIDDID
                     EEGIIGRSMADAPEIDGVVYVDNPSNQLVTVGQIISVTITHADEYDLWGILNN"
     gene            complement(21123..21815)
                     /gene="mtnN"
                     /locus_tag="PXD18_000387"
     CDS             complement(21123..21815)
                     /gene="mtnN"
                     /locus_tag="PXD18_000387"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HDL6300852.1"
                     /translation="MKIGIIGAMAQEIEILRQVMVEPKVTELAGCKIFEGKINNTRVA
                     LLQSGIGKVAAAIGTTLLIQLTQPDMIINTGSAGGLDPDLNVGDILISTEVRYHDVDV
                     TAFGYEIGQLPANPPTFSPNEQLVELAQKEAKKAGYNVVSGLICSGDAFINGNDKINQ
                     IRQNFPNVVAVEMEAAAIAQVCHGFNLPFVIVRAVSDVADKESHLSFEEFLPLAAEKS
                     STIVLAMLNNID"
     gene            complement(21873..22094)
                     /locus_tag="PXD18_000388"
     CDS             complement(21873..22094)
                     /locus_tag="PXD18_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HDL6300853.1"
                     /translation="MDNNYTLSAKITELETKVAFQELIIEELNQALIEQQFAIDKLQT
                     QIRHIAEKLKGAQLSQVASQAEETPPPHY"
     gene            22182..22907
                     /gene="fkpA"
                     /locus_tag="PXD18_000389"
     CDS             22182..22907
                     /gene="fkpA"
                     /locus_tag="PXD18_000389"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL6300854.1"
                     /translation="MLKTKLSLFTLIVGTLFSTNVMAEEKADPKFVDDSSYAVGVLMG
                     KNINGVIESQKDIFTYNQDKILAGVQDTLKKTGKLTDEDLQKQLKSLDAYLSAKEAKI
                     NEEKTKATVAAGDKFRADYKKQSGVKETASGLLYKIEKAGEGNSPKAEDTVKVHYKGT
                     LTDGTVFDSSYDRGEPIEFQLNQLIPGWIEAIPMLKKGGKMEIVVPPALAYGDRAAGK
                     IPANSTLKFEIELLDFKAADAKK"
     gene            23004..23660
                     /locus_tag="PXD18_000390"
     CDS             23004..23660
                     /locus_tag="PXD18_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6300855.1"
                     /translation="MTKKFTPFSDEDHAILASYFPMVDGIAALIGEHCEIVLHSLEFL
                     EHSAIYIANGHNTNRKIGSPITDRALKSLHHMATDSVSKPYFTKAKGGVLMKSITIAI
                     RNGKQHVIGLLCININLEVPTSQFLNSFIAPVDTASEVTFASSVEDLVSQTIQTTIDD
                     VMADRQISNNNKNRQIVISLFEKGIFDIKDSINQVAEKLDISRHTVYLYIRQIKQDND
                     "
     gene            23660..24037
                     /gene="tusD"
                     /locus_tag="PXD18_000391"
     CDS             23660..24037
                     /gene="tusD"
                     /locus_tag="PXD18_000391"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusD"
                     /protein_id="HDL6300856.1"
                     /translation="MDYVLAIKSPVYGSQGAFLAYQVAEELLKANHTICQIFFFQEGV
                     SNANALVNPASDEVNLVEMWKKLAKLHRLPLHLCIAAAQRRGVVDEQISANATHNLAE
                     GFTLAGLGEFSQAVLKADRLLTF"
     gene            24039..24410
                     /gene="tusC"
                     /locus_tag="PXD18_000392"
     CDS             24039..24410
                     /gene="tusC"
                     /locus_tag="PXD18_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusC"
                     /protein_id="HDL6300857.1"
                     /translation="MKKYKLAFLFTQPPFGSAVSREGLDALLAASAFCDEQEIAILFI
                     NDGVFNLIADQQPEKLLQKDHISTFKLLELYDLTECFICQESVSLRGLDNADWLLRML
                     QFKTHAEMIALLNQAEKVMTF"
     gene            24420..24695
                     /gene="tusB"
                     /locus_tag="PXD18_000393"
     CDS             24420..24695
                     /gene="tusB"
                     /locus_tag="PXD18_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusB"
                     /protein_id="HDL6300858.1"
                     /translation="MLYTLSKANYDEETLNFFFSHLSENDAVVLWQDGVLQAVKSPQF
                     FAKLPRCYLLAQDVQARGLQEKLTAFQCISLSELVKLTAVYFPQVAL"
     gene            24811..25710
                     /locus_tag="PXD18_000394"
     CDS             24811..25710
                     /locus_tag="PXD18_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300859.1"
                     /translation="MVMAEENNTWVDKKHETVSTTLDRWANNINSWLGDADPDKPGTA
                     SLRVMLDSRWDKHDKFTYKPRVRGKIKLPILKKHLNVVFGDDELDNELTDKNHAGKLY
                     KNVNPNKRYNSREARDSNSSIGLRWSDGIKALGIETDLDAGIRSGSDIFGRLRISKDW
                     KITDQFSTRLEQIYRYGSESKHYLRTNFENKYTETDTTFIMNHTNFEYRHDVDEERSW
                     GNSLYRQHNFKPLTHISYGISMGGRLDKELSKFNYWGPFVSYRQPIWRNWLFIQPEIS
                     FYNDKDKDRKHFIQTFVRLEAIF"
     gene            26060..30085
                     /gene="rpoB"
                     /locus_tag="PXD18_000395"
     CDS             26060..30085
                     /gene="rpoB"
                     /locus_tag="PXD18_000395"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDL6300860.1"
                     /translation="MAYSYSEKKRIRKSFGKRPQVLNVPYLLTIQLDSFEKFIEKDPE
                     GQQGLEAAFRSVFPIVSNNGATELQYVSYELGEPVFDVRECQIRGTTYAAPLRVKLRL
                     VSYDREAAAGTVKDIKEQNVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSD
                     KGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFARIDRRRKLPATIILRALGYTTE
                     EILNLFFEKIKFEIADNKLLMTLVPERLRGETASFDIAANGKVYVEMGRRITARHIRA
                     LEKDNVTQIEVPVEYIVGKVAAQDYVDLSSGEVICPANMEISMEMLANLSQAGYNQIE
                     VLFTNDLDHGPYISETLRVDPTYDRLSALVEIYRMMRPGEPPTKEAAEALFDNMFFSA
                     ERYDLSAVGRMKFNRSLEIPEGVGSGILSNDDIIGVMKKLIEIRNGRGEVDDIDHLGN
                     RRIRSVGEMAENQFRIGLVRVERAVRERLSLGDLDGVTPQDLINAKPISAAVKEFFGS
                     SQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTHYGRLCPIETPEG
                     PNIGLINSLSVYARTNNYGFLETPFRKVVNGQVTEEIEYLSAIEESNNIIAQANSNLD
                     ENFRFTDTYVTCRQQGESGLFKPEEVQYMDISTQQVVSVAAALIPFLEHDDANRALMG
                     ANMQRQAVPTLRADKPLVGTGMEKPIALDSGVAIVAKRGGTVQYVDASRIVVKVNEDE
                     TIPGEAGIDIYNLIKYTRSNQNTCINQVPCVNLGEPVARGEILADGPSTDLGELALGQ
                     NIRVAFMPWNGYNFEDSMLVSERVVQEDRFTTIHIQELSCVARDTKLGAEEITADIPN
                     VGESALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVK
                     DSSLRVPNGTSGTVIDVQVFTRDGVEKDKRAKEIEEMQLCEAKKDLAEELEILEAGLF
                     TRVRNLLIEGGVKESALDGVAREKWLEQTLEDEAKQNQLEQLAEQHEELRKEFERKLE
                     IKRNKIIQGDDLAPGVLKVVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPVEDMPYD
                     ENGQPVEIVLNPLGVPSRMNIGQILETHLGLAAHGIGDQIDKMIKQQQEVAKLREYMQ
                     KAYDLGHGSQVVDLSTFSDEEVMRLAQNLRKGLPLATPVFDGAHESEIKGLLELGGLP
                     TSGQITLYDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKA
                     QFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGTHYMEPGIPE
                     SFNVITKEIRALAIDMELDEA"
     gene            30348..34631
                     /gene="rpoC"
                     /locus_tag="PXD18_000396"
     CDS             30348..34631
                     /gene="rpoC"
                     /locus_tag="PXD18_000396"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HDL6300861.1"
                     /translation="MKDLVKFLKAQTKSNEDFDVIKIGLASPDKIRSWSFGEVKKPET
                     INYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRER
                     MGHIELACPVAHIWFLKSLPSRIGLILDMPLRDIERVLYFESYVVTEPGMTDLEKNQL
                     LTEEQFMDAEERWGDEFEAKMGAEGIQALLRDLDLEHQCETLREELQETNSETKRKKI
                     TKRLKTLEAFLQSGNKPEWMVMTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINR
                     NNRLKRLLDLVAPDIIVRNEKRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKG
                     KQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFRPFIYSKLENRGIA
                     STIKAAKKMVEREDPIVWDILAEVIREHPILLNRAPTLHRLGIQAFEPLLIEGKAIQL
                     HPLVCAAFNADFDGDQMAVHVPLTLEAQLEARALMMSTNNVLSPASGDPIIVPSQDVV
                     LGLYYMTREKVNGKGEGMYFLDPREAEKAYRTGQAELHSRVKVRVTEYEKNEAGELEA
                     KTSLVDTTIGRSILWMIAPKGMPFSLFNQTLGKKAISKLINESYRRLGLKESVVLADQ
                     IMYTGFAYAARSGASVGIDDMVIPEQKYAIIEAAEAEVAEIQEQFNGGLVTAGERYNK
                     VIDIWAAANERVAKAMMENLSTEEVINREGNPEKQASFNSIFMMADSGARGSAAQIRQ
                     LAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLT
                     RRLVDVAQDLVIIEDDCGTHEGIVMTPLIEGGDVKEALRDRVLGRVVAEDVLKPGTDE
                     VLIPRNTLLDEKWCDVVDRESVDVIKVRSVVTCDTDFGVCAKCYGRDLARGHLINQGE
                     AVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSIQVKNAGTIKLTNAKFVTNKEG
                     KIVLTSRNTELTVIDTFGRTKENYKVPYGAVLSKHDGAEVAVGEVVANWDPHTMPVIS
                     EVSGRIQFSDIVDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPALRLVDSNGKD
                     ILIPGTDVAAQYFLPGKAIVTLDDGAEIEVGEALARIPQESVGTKDITGGLPRVADLF
                     EARKPKEPAILAEISGIVSFGKETKGKRRLVITPAEGEAFEEMIPKWRQLNVFEGEMV
                     QRGDVISDGAETPHDILRLRGVHAVTDYIVNEVQEVYRLQGVKINDKHIEVIVRQMLR
                     KAVITNAYDSEFLEGEQVEVARVKIANRKRAEEGKPLVEFERELLGITKASLATESFI
                     SAASFQETTRVLTEAAVAGKQDELRGLKENVIVGRLIPAGTGFAYHQARAKKRAQLEA
                     GIAVVPEFEAPAAKANSFVTDADIEAEFEFVADDATQSLAALLNAGEEE"
BASE COUNT        10480 a         6985 c         7904 g         9877 t
ORIGIN      
        1 tcagttggca ttttgctctg ttctttctaa ataggaaaat taaggattta gccctataat
       61 atggaacaat taggaaaata gtatggcaaa tggaacaagt agaaatcgaa gatcttcggg
      121 cagagtcact ttagctgatg tagccaaagt tgttggtgtt gggcagatga cggtatctcg
      181 tgctttgcgt acaccagaaa tggtgtcgga gccactacgt aaacggattg aagaggcaat
      241 cattgaacta ggatatattc cgcatttttc tgctcggcaa ttagcttctg cagaatcaca
      301 taatttggtc attgtgacga cgtcgattag ctcaacggaa aataccttaa ttttatcggc
      361 attacgcaaa agcgtggcgg attccgcatt gcaaatggtg attttgatcg ctgatcaaga
      421 atcttggttt caagaactga ttaatcatgc tcctcaagcg atagtgtttt tgaatttaga
      481 ttgccctcct aatgtccgtg agtggattaa aaacagcaat atccctaccg tagaaatagg
      541 tgcgataaaa aaagaaccga ttcatctcag tgttggaatt gatagccacg aagcaatgga
      601 gaaaatgatc cattttttgg tgaaaaaagg ctatcgagag attggattgt tatcggcgaa
      661 gcaagattta tccatcttca aacaatattt agaaagttgg catacgactt tatttgcaca
      721 tcatatttct cctttaaaaa tccaccacgt agtagaggat atttcgtttt cggcaggagc
      781 aactttgttg actgaagccc ttctaaattg ggaagcaata gatgcattgg tttttttatc
      841 cgatgaattg gcttgcggag cattatatga agcattacgc cgacatatga gcattccaaa
      901 agatcttgcg attgccggtt taggtggttt agaagtgggg agtatttcct accctaaatt
      961 gacaaccatt gcgatccctt acgagcaaat gggaaaaata gcaggtaaac aactacttac
     1021 tcttttgagt ggtaaaacct tatcagcaga agagatgatt gttaaattac cgactaagct
     1081 agtgattcgt gatagcgccg cataatattg attttgcata aaaatctata aaagatcgtg
     1141 gcaagtcttg tagaaaatga tagaatttaa cgctttaaaa taatttctga tttttttatt
     1201 cattttttag gttatatatg gctactgaga ttaaaacaaa aacccccgag caagtcgaac
     1261 aaaaaggggg gaaaagcaaa ggtgcaaata cagcattatg gctggttgcg attgtatttt
     1321 tagcagttgc tgcggtaggt aatgcctatt tttcatctca tttttcatta attgttcgag
     1381 tgcttttatt ggtggtgttg ctagttggtg ctgttgcact agcggcaatt acaaatcagg
     1441 ggcaaaaggc aattcatttt attaaagagt ctcgaaccga actacgcaaa attatctggc
     1501 cgacacgccc tgaagcaaca caaaccacct tgattgtatt ggcaatgtgc gtagtagttt
     1561 ccttggtttt atggggtatt gactcaatca tcgtcgcatt aattacattt gtaacaagtt
     1621 taaggttcta aaatgagtga agtagaagtg aaagaaaatg gctcaaaacg ctggtatgta
     1681 ttacaagcgt tttcaggctt tgaaaaccgt gtggcagtaa cattgcgtga atacattaag
     1741 cttcacaaaa tggaagagca gtttggtgaa gtattagtgc caaccgaaga agtcgttgaa
     1801 aatgtgggcg gtaaacgccg taaaaccgag cgtaaattct tcccaggtta tgtattggtt
     1861 gaaatggaaa tgaatgacga tacttggcat ttagtgaaaa gtgtgcctcg tgtaatgggc
     1921 tttattggtg gtacggcaga tcgccccgca ccaattacca aacgtgaagc agaccgcatt
     1981 ctaaaccgtg tacaagaaac agcggaaaaa ccacgccaca gaaaagaatt ccaaccgggc
     2041 gaaagcattt tggttacaga aggtccgttt gcagatttct ccggtacggt cgaagaagtg
     2101 gattacgaaa aaggtcgctt aaaagtatcg gtgtcgattt ttggtcgtgc gacaccggta
     2161 gaattagaat tcagtcaagt ggaaaagcag agctaatttc aattaatttc acacacaagc
     2221 ggttattttt ctcaattttt tgcaaaattc agcggaaaaa agaccgcttg taacaagatt
     2281 tattcaacaa agcgaaagtt ttgcttgaaa aatagtcgca aattctttaa aatttgcgac
     2341 ctattacgag ccagcctgct gactcgtatt ttttatgtaa caggggagct gattttcagc
     2401 gttatcaccc atttagagga aaattaaaat ggcaaaaaaa gtccaagcct acgttaaact
     2461 gcaagttgca gcgggtatgg ctaacccatc accaccggtt ggtcctgcat taggtcaaca
     2521 aggtgttaac attatggaat tctgtaaagc attcaacgct cgtactgaga gcttagagaa
     2581 aggtttaccg attccggttg ttatcacagt ttacgctgat aaatctttca cattcgttac
     2641 caaaactcca ccggcggcag tgctactgaa aaaagcggta ggtatcaaat ctggttctgg
     2701 taaaccgaac aaagataaag tgggtacagt aactcaagag caaatccgtc aaatcgctga
     2761 aactaaagca gcagatatga ctggtgcgac tatcgaaacc aaaatgaaat caatcgctgg
     2821 tacagctcgc tcaatgggct taatcgtaga ggaataatac aatggctaaa ttgactaaaa
     2881 aaatgaaagc aattaaagct ggcgtagatt ctactaaagc ttatgacatc aacgaagcag
     2941 ttgaagtgtt aaaaaaattc gcaaccgcta aattcgttga gagcgtggac gttgctgtaa
     3001 acttaggtat cgattctcgt aaatcagacc aaaacgtgcg tggtgcaacc gtattaccac
     3061 acggtacagg ccgtaccgct cgtgttgctg tgtttacaca aggtgcaaac gcagaagcag
     3121 caaaagcagc gggtgctgac ttagtgggta tggaagatct tgcagagcaa atcaagaaag
     3181 gcgaaatgaa ctttgatgtt gttatcgctt ctccagatgc aatgcgtgtt gtaggtcaat
     3241 taggtcaagt attaggtcca cgcggcttaa tgccaaaccc gaaagtaggt acagtaacac
     3301 caaacgttgc agaagcggtt aaaaatgcga aatctggtca gatccgctac cgtaacgaca
     3361 aaaacggtat tatccacact actatcggta aagcagactt ctcagctgaa caattaaaag
     3421 ataacttaaa cgcattgtta gctgctttaa caaaagcaaa accaacaaca gcaaaaggta
     3481 tcttcatcaa gaaagtaagc atctctacta caatgggtgc tggtgttgcg gttgatcaag
     3541 catcacttta atttttaata gaatcaaaag accgtagtgt taatactcta cggtcttttt
     3601 ctttaggtac gaatgttaag attattatct ttttgcttta tttttttgct tagtgcttgt
     3661 actgtattac ctcaaattaa gcaattaccg ccacaggttg aatctgtaaa atcctttaaa
     3721 gttgaaaata atggccagca aagtttgctt ctaattcaat tttatgaaaa taaatggcgt
     3781 tggattcaaa ctgatccttt aggtgctcct attgccagag tatggcttac taaaaaaggt
     3841 tgggagccag atggctttgt aatgccaaat aagcaggcac agctattatt tacagcttta
     3901 gtcaatgcat taaaccctca ttctccacct ttttatttag ataaaggttg gaaaattgag
     3961 agggaaaaat cccaatttac gatttggcta ccagatagca gtaaatggaa agtggaaata
     4021 ttgggggaat aagcgaaaac ttgaacctct atgcttgaat cacttgaata tgaattttat
     4081 aattttagtg ccattacaca ataatactgg aataaataat aatgacacta tatttatcag
     4141 agcccgccat caccagtccg attggatatg gcatcgtgga gcatttgaat gttttaatta
     4201 atgcgaaagt atctccttta gatacgactt cacagcctta tttacgacat aatatttcaa
     4261 atagttcacc gaaatttcta gggcaagtct ctgctagatt gcgtgatttt cctgttgaac
     4321 tatctattga acaccgcagc cgcaataacc aactgctatg gcacgccctt gcagaaattg
     4381 agccgaaaat taccgcttgt atcgagcaat tcgggcgtga gcggattgcg gtgatcatcg
     4441 gcacgtccac taccggcgcc gatgaaaata ttcccgtctt caaagccggt gtgcagggcg
     4501 attatgccac cgagcagttt aatcaacagc aaattctctt ctctgcgccg tctgatttcg
     4561 ttgccgaagt gtatggctta acggggctga gttacggcat ttccaccgcc tgcacctcag
     4621 aggcaagagc gttaatttct gctgcccgtt tactgaaagc cggcttgtgc gatgcggtga
     4681 tttgcggtgg tgtggatacc ctttcgcctt taactatcag cggatttagc tcgctggaag
     4741 tgttatcaaa ccaacaaacc aacccatttt ccgctaaccg taacggcatt aacatcggcg
     4801 aaggcgcagc ggtgtttgtg atgagccgtg aaccactgga cgaacatcgc attcagttac
     4861 tgggttatgg ttccagctcg gacgcttacc atatgtcctc acctcacccc gaaggggaag
     4921 gggcaatttc cgctttccaa aatgccctgc acaatgctga tttagacgca gccgacatcg
     4981 gctggatcaa cctgcacggc acagggacgc ttcataacga tcaaatggaa agcctcgctg
     5041 tggcaaaaat cttcggtaat cagaccgctt gcaccaccac caaaccctac accgggcata
     5101 cccttgggct gccggtgcgg tggaagcggc aattttgtgg ggaatgctct gtcgccaaca
     5161 caacccgacc ggcaagctcc ctgcgcaatt atgggataaa caagcggacg aaaacctgcc
     5221 gaacattgcg atcaccgatg aacagagccg ttgggcagca ggcagacgga ttggcgcaag
     5281 cagctctttt gcctttggcg gcaataacag cgtactgatt ttgggagaaa gcgatgcata
     5341 aattcacctt ccctatcgaa caaattgcac cattggttcc tcacagtggc aatatgatcc
     5401 tactcgaccg cattaccgca ttcggcgagg attttttgac cgctgaaacc aatattcgcc
     5461 ctgacaatcc gctgatcaaa cacggaaaac ttgccaccta cgccagcatt gaaattatgg
     5521 cacaagccgg cgaaccagtt cgcttaggct acctgctcgg cactcgcaaa ctgcacctcc
     5581 accgccaaga aatcccgatt ggctcacagc tacaaattca gatcaaaatg tctattcaag
     5641 atgccaccgg cttcggcgta ttcgactgcc aactgatcga tttagccgac aaccaagtgc
     5701 ttttagaagg ggcgctgaat gtgtttagtc cgaaatagag ttggtagtag taagtagtag
     5761 taagtagtag taagtagtag taagtagtag ttggtagtag ttggtagtag ttggtagtag
     5821 ttggtaggaa attcgttatg caagaggcct atgacattca acatctttgt actcgcaaag
     5881 aagataaatc ctttgatcgc aaaagtgcga gaaaagaacc gaaagagatt ttgcggcatt
     5941 tgattggttt tgcgaatgca gacggcggtt tattagttat tggtattgaa gataatggcg
     6001 aaattaccgg ttttaactac caaaaagccc atcagccgga agaatttatc cacgctctgc
     6061 acaatttaca aaaaatgccg ataccggtga cctatcagca aattgaggtg gtaaatagtc
     6121 gaggtttagc ggattttgtc ttattatttg aagttacagc ttcgagtggg agggtgatta
     6181 cctctcacga tgatcgggtt tttctacgct caaaagatca aactttggaa ctcaattttg
     6241 aacaacgttt gcaattagag tacgaaaaag ggcagcgtgc ttttgaagag caaccgatag
     6301 cacgcgctga ttttactgat ctggatatgg atttattaga acagtatcga cagaaattac
     6361 acacagatcg ctcaatagaa gagattctga aagcccgaga tttaattaac aaagaagggc
     6421 aaattacgaa tgcctgtatt ttgctatttg ggaataaccc gacacgttat tttcctaatg
     6481 cccgtttgcg ttttttgcgg tatgaaggta aagcacctct gaccggtaga acttttaatg
     6541 tcgtcaaaga atttatgctt gaagagccta ttcctaagtt attggagagt gctaaggcag
     6601 tattaaaaag ccaattacga gagttccaac gtttagatga aaacgggcaa ttcacaaaaa
     6661 ttgatgagta tccagaattt gcttggttag aaggtattgt caatgcgatt gcacaccgta
     6721 gttacagtaa tcaaggggac tgcattcgca tttcgatgtt tgatgaccgt ttggaaattt
     6781 ttagtccggg tggattacct cgccctgtga cgcttgaaaa tatgtactat acccgttttt
     6841 cacgcaatcc gaagattgca cgagtgctgt atgaatttgg ttgggtcaaa gagctgaatg
     6901 aaggtgttaa tcgtatggcg gaggaaatga acgcttacca acttaataca ccttcttact
     6961 ttgaacccaa tgaaaatgcg gtcagactga ttttagaaaa taatattgaa catcggacat
     7021 taagggcatt agaacgaata gaagaaattt ttacgcagga tattatggcg acattaaata
     7081 aaaatgaagt tactatcctg caatatttat atgaaaatga aatgattact gtaaagattg
     7141 ctagtgagat attagatcgg agtaaagaat tatctcgtag aatattaaaa agtttagaac
     7201 aaaaaaatat tctcacttgg cacggcttaa gtccaaaaga tccaacccaa tactacacac
     7261 tcaagagata gtaggaaata taagatgaat aatacagttc tcatcaccgg ctcaagccgt
     7321 ggtatcggta aagcgattgc tttaaccctt gcacaacaag ggtttgatat tgtggtacat
     7381 tgccgttctc gtgtggaaga agcggaagcg gtggcacaag cggtcagaaa tctcggaaaa
     7441 aatgccagag tgttacagtt tgatgtggcg gatcgtgaaa aagtgcggtc gattttagag
     7501 gcagatgtgg aacaacatgg tgcctattac ggcgtggtgc taaatgcagg gcttacccgt
     7561 gataacgcct ttcctgcttt aaccgatgag gattgggata gcgtgttgcg taccaattta
     7621 gacggttttt ataatgtcct gcacccgatt atgatgccga tgatccgtcg ccgtaaagca
     7681 ggcaggattg tctgtatcac ctcggtttcc ggcttgatcg gcaaccgtgg gcaggtcaat
     7741 tacagcgctt caaaagccgg cattattggt gcggcaaaag cactcgccat cgagcttgcc
     7801 aaacgtaaaa tcacggtaaa ctgcgtggcg cccggcttga ttgataccga tattctggac
     7861 gaaaacgtcc caatcgaaga aattctcaaa atgatccccg caggacgaat gggcgatcct
     7921 gatgaagtgg cacacgccgt tgcgttttta atggatgaaa aagccactta catcacacgc
     7981 caagtcatcg ctgtgaatgg tgggttgtgt taactttagg ataataattc gtaggggcgg
     8041 atccagtacc cgcccgaagc caaaaagaga taaatatgaa acgagtcgtc atcaccggaa
     8101 ttggtgtggt taccgctttt ggtaaagagt gggcggaaat tcacggctat caaccgccga
     8161 aacattggaa ccgcaagcag ttgcgcagcc ttgggcgagt gtcgcaattt gtggtggagg
     8221 ccagcgagcg ggctttagca caggccggtt tgttggacga aaacggcgtg attttcgact
     8281 ggctaaaaga caggcgaatg ggcgtggcgt gtggctcgtc cacaggctct accaatgaca
     8341 tcaaagatgc cgccgaattg ctgatgaccg gcaaatcgga cggtttcaat gccaacacct
     8401 atgtgcgaat gatgccccac accaccgctg ccaatattgg cattttcttc gggctgacag
     8461 ggcggattat cccgacttcc agcgcttgct cctcgggcag ccaaggtatc ggttacgctt
     8521 acgaagccat taaatacggt atgatcccga tgatgcttgc cggcggtgga gaagaatttt
     8581 gtgcctccaa agtctatgtc ttcgacagcc tctatgctgc cagccgccgc aacgacaacc
     8641 caaaaggcac gccacgcccc tatgacaaag accgagacgg cttagtgatc ggcgagggag
     8701 cgggaatgtt cgtattggaa gagctggaac acgcgttagc acgaggggca aacattatcg
     8761 ccgaagtggt gggctacggt gcaaacagtg acggttccca cgtcacccgc ccacaagcca
     8821 ccacaatgca acgctgtatg gaacttgccc ttaaagatgc cggtattcaa ccgaaccaag
     8881 tcggctatgt aaacggacac ggcacggcca ccgagcaggg cgacattgcc gaaactcaag
     8941 ccaccacagc ggtgttcggc aaaattccgc tcagctcgca aaaaagctac ttagggcata
     9001 cgctcggtgc gtgtggtgca ttggaaagct ggttcagcat tgaaatgatg cgagacggct
     9061 ggttcgcccc aacactgaat ttagaaaatg tcgatgaacg ctgtggcgac ttggattacc
     9121 ttcaaggtga cggacgggaa atccacaccg attatgtgat gaacaacaat ttcgccttcg
     9181 gcggtgtgaa tacctcattg atttttaaac gttggaaata accgttttca aataatgaaa
     9241 aagatattat tagtttatta ctcccaaacc gggcaactca cccatttggc agaaaatttt
     9301 gtacaatcgc ttgaacaagc gggcgttttt gtggaaaaac tcgcaatcaa accgcaacag
     9361 gaatacccgt ttccgtggcg gtttatgcgt ttttttaaca ccttccccga aaccgtccac
     9421 ctcacaccgc cgccgattga gcctctgccc tttcagcacg aaatatacga tttggtgatc
     9481 atcgcctatt ccgtgtggtt tctctccccc agccagccga ttaccgcttt tttacagagt
     9541 gaacaggcaa aaaagtgttg aaggatacgc ccgtcatcac gctgatcggc tgtcgcaata
     9601 tgtggctgat ggcgcaggaa aaagtgaaaa aactgcttgc cgagagtgag gcgaagctca
     9661 ttggcaacgt ggtcaaagtg gatcaatcta acgactgggc gagttttatc accacaccgc
     9721 tttggatgct gaccggcaag aaaaaaaatc ggcaagctgc cgagcgctgg cattgccgaa
     9781 agcgaaatgg aagatgtaaa acgcttcggg gcaaaacttt tgcacatttt tagccaaaac
     9841 caaccgcttg acagcaccct tttccgccaa atgcaagcgg tcaaaattga cgaaaaattg
     9901 atgatgagcg aaaaagtcgg tgcgagaagt ttccaccttt ggggcaaatt actgatcaag
     9961 tgcggtcaaa tttcaccgca cttacgccaa gcggtactct atttttacat cctcttttta
    10021 gtgacgttaa ttttaaccgt cgtcccgatt tcaacggtga ttaaacggct attacgccca
    10081 ctgctgaaag aaaaattaga aaaacaaaaa cggtattttg ccgagccttc gggcgagtaa
    10141 acgtacccta cacggaaact ttatgctatc taacgtctat atcaccaaca cctccgcctt
    10201 tttacccaac gcccctgtgt ccaacgatgc aatggaagcg gtgttgggaa tggtggggga
    10261 aacgccttcc cgagtgcgga agatgatttt gcgttctaac ggtattcaac atcgttatta
    10321 tgccattgac ccgataaccc gccaagcgac tcacagcagt accgagttgg cggtgcaagc
    10381 ggtcaaaaaa ttgggaaatt ctgcaacatc agcgacttgc ttggcggtgg ggacatctta
    10441 ccccgaccaa attatgccgg ggcagggggt gatggtacac ggcttgcttg atgccgaacc
    10501 gatggaagtg ctgaccactg ccggtgtgtg cgtggcggga atggcagcga tgaagcacgc
    10561 ctataatgcc gtacgcatcg gtgagcatcg tgctgcgatt gcaacggctt ccgaaaccgc
    10621 ctccgccatt atgcgcagtg aacatttccg tgccgaaatc gatcataaaa aactggacga
    10681 tgctcgccct gagatcggtt ttgagaaaga tttcctgcgt tggatgctct cagacggtgc
    10741 aggggcggta ttgcttgcca atcagccgaa cgaaaaaggg ttgagcctca aaattcactg
    10801 gatcgatctg gtctcttacg ctaacgaaat gccggtttgt atgtacgccg gtgcggaatt
    10861 tattgacggc aactacaccg gctggaaagc aatgagcgaa gcccaacgtg ccgaatgctc
    10921 ggcaatggcg gtgaaacaag atgtcaaact gctcaacgaa aacatcgtca aatacacggt
    10981 ggaaaaagca ttggagcgga ttatcccgaa atacaagctc aacgctgaag agattgacta
    11041 cttcctgccg cactactcgt ccggttcctt ccgagataaa ttattggaag gtttacagcg
    11101 gatcaatttc ctgatcccac aggaaaaatg gttcaccaac ctgactacca aaggcaacac
    11161 tgggtcagcc tcgatctaca ttatgctcga tgaatttatc cgcacccacg atctcaaaca
    11221 gggacaaaaa atcctctgct atgtgccgga aagcggacgt ttttcgtctt gttttatgct
    11281 tttggaagcg gtggtaaatt cgtaaaatcg tagggacggg ggctattccc gtccaacaat
    11341 catcggaaaa cgtatggaca tcaatgacat tccccaagac aacagcaaaa tcttcaacgg
    11401 cgaacgcaaa gtgatctacg cccgcaatcc gcaaccagaa atccgccaaa tgatctcctc
    11461 tattctcgct tgctacgctt gggacgaaaa caacccgttt gtagcgaagt ctgatgcacg
    11521 gttgaaggca ttggcggaag ttgttggtaa agcagaaatt ggcgattaag tttgattttg
    11581 tgctttacag ggtcgcagat tatctgtata atttgcgacc ttaacttgcg agagcaagct
    11641 gatggtgctt agcctatcta agccccgtct aagactgtag gggtgaaaac ttaataatcc
    11701 tacatagatg gtgaacagac agaattctct gcttctggac accttaggct caaagaagat
    11761 tgcagtttgt agcaatgcaa gcggtaatat ttttgggatt ttttgtaaat tctgcttgaa
    11821 aaggcagagt gtatcaggag ctaaaaccaa tggcattaaa tcttcaagac aaacaagcga
    11881 ttgttgctga agtaaacgaa gctgccaaag gtgcactttc agctgttgtt gcggattctc
    11941 gcggtgtaac agttgaaaaa atgactgagt tacgtaaagc agctcgtgaa gctggtgtga
    12001 caatgcaagt tgtacgtaat actttattac gtcgtgcagt ggaaggcacc gagttcgagt
    12061 gcttaacaga tacgtttacc ggtccaactc ttatcgcatt ctcaaatgaa cacccaggtg
    12121 cagcagcacg tttattcact gaatttgcga aaacaaacaa agagtttgaa cttaaaggtg
    12181 cagcctttga aggtaaaaaa caagatgttg cattcttagc aaccttacca acttacgaag
    12241 aagcaattgc acgtttaatg ggcacaatga aagaagctgc ggcaggcaaa cttgttcgca
    12301 ctcttgcagc attacgcgat caaatggaag cagcagctta attttaagca ctcttcttta
    12361 ttcgtttaac aacttatttt actttaggaa tcgattgtta tgtcattaac taacgaacaa
    12421 atcattgaag cgattgcttc taaatcagta tcagaaatcg ttgaattaat cactgcgatg
    12481 gaagaaaaat tcggtgtttc agcagcggca gcagtagcag cagctccagc agcaggcgca
    12541 gcggcagcag aagagaaaac tgagtttgat gtagtattag cagaagctgg tgcaaacaaa
    12601 gttgctgtaa tcaaagcagt acgtggtgca acaggtttag gcttaaaaga agctaaagac
    12661 ttagtagaat cagctccagc tgcattaaaa gaaggcatct ctaaagcaga agctgaagca
    12721 cttaagaaag aattagaaga agctggcgcg aaagtagaaa tcaaataatt tttgatttat
    12781 tttgtcagaa cttcaagttc aacaaacccc gatggaaaca tcggggtttt gttttttcag
    12841 aattgtgtaa tgtagatatg attaccttta tccattactt gcgcagcagt gaaaaatgta
    12901 aaaattccac aaagtgatct gcccagtgca tttcgtggtg gatttcattt gccataatcc
    12961 gcaggcggat attgtctaac ggcacgccaa tccgaatcag tgcttggtag taattgagcg
    13021 aacaatcaat ataggtttgg ttcgtattag agataaagtg cgaatcgatt tcatcgcctt
    13081 cgttagtgcc aacctgaata aacactttgg tattgggttg taacggatat tggtgcgtaa
    13141 aacgcagaaa atccggctca ctaaaccaag aggcaagcga aaacacccct aaatgcccga
    13201 aaatatgtgg gtagcggctg cccatataag cggtgataat gccacccatt gaactgcctg
    13261 ccaataaggt atgttcttgc tgaggcttgg tgcgatagtg aatatcaata aagggtttaa
    13321 ccgtttccac cacccatttg gcatattcct cccctaagcc tccggcattt cgggtttcag
    13381 gggttgagcc ggtggttgtt ttccacgggc cgtattcatt taagcgatta gctcctgcgt
    13441 tatcaatgcc gacaataatc atcttcggta attcttggtg tgatttaatg gttggaataa
    13501 ttttccaaga atgccccgaa taagactctt tgctgtaaaa cacattttgc ccgtcgtgca
    13561 tatataacac cggataacgt tcccaacctt cgttgtgata atccttcggc aatagtaccc
    13621 gaatgcggcg gtgatggtgt aaatagggaa catataaaaa atgctcctgc atttctaaat
    13681 agtggttaag tggtttttgt accatcagtc tgtccttttg cttaaattgt ggcgtatttt
    13741 acaccttaat cagtctgagt taaaacaagc ggtcagaaaa agtcaaaaat ttgcaaattg
    13801 ctgttaccta acgcaatcgg ttgccttatg cttttgagga atataaaaga gaaactgtga
    13861 tctaagtcac agcaattttt attcggtttg actaaaatcc gaactatcac ttaatagaga
    13921 ggaaaatgtt atgcaggctt cattacaaga tattcttgag gtagtaaaag caaaaaatct
    13981 cacttatcag caaaaattga tgagtttagg caatattgct gagcggttat ttaacccgat
    14041 tgaactactt ggctacactg aagaagagtg ggaacacatt gaaaatcaga tgatttgcga
    14101 tttaaatgaa ggttatgcga tttatcgccc acgttatatt ttgcctgatt ataatgtgta
    14161 tatgcaaaaa ggttgccaat tcttagattt acctccgcca accaatttag atgaagcctt
    14221 agacggcttg ttaattctgt attcacacgt tccgtccatt actacttttc cggtgtatat
    14281 cgggcgttta gaccaactgt tagaaccgtt tataaccgat gaagagcaag attacattaa
    14341 aatcaagcgt ttcttaaatc atatcgataa aaccatttcc gattctttct gccacgctaa
    14401 catcgggccg aatgacacca aagccggtcg tttaatctta aaagcggtga ttgagcttga
    14461 aaacattaca ccgaatatga cgattcgtta tgataaaacc aaaacatcgc gtgaatttgc
    14521 cgaactggcg gcgaaagcgt gcttgttggt gtccaaaccg tcttttgcta atgatgccta
    14581 ctacattcaa gatttaggcg aagaatacgg aattgcaagc tgttataacg ccttaccgga
    14641 atgtggcggt gcttacactc tgacccgcct gcgtttaggt actatcgggc gtgcttgtgc
    14701 gagtgttgaa caaatggtca atgagatgct gccgaaagtg gcaaaactcg ccctttccac
    14761 gatggataaa cggcataaat tcttggtgga agaaagcaat ttctttgaaa gtagcttctt
    14821 ggttcaggag ggctttatca aacgtactaa cttcacaagt atgattgcga ttgtaggtct
    14881 tgctgatgcg gtgaatcatt tactcaagca agaaggttta aatgaaacct ttgggcaaag
    14941 caaacgtggc gatgaaattg cgacgctgat tatggataag ctccaagcag taaatgacgc
    15001 tcataaaggg ctgtatgttg aacgaaccaa taaccaatat ctgttacacg ctcaagtggg
    15061 ggcaaataac cacgctgaag acaaaatgaa cacgccggca caccgcattc gtgtgggcga
    15121 agagccaacc ttattggcac acttaaaaca gtctgctcct ttccataaat atttcccatc
    15181 cggtacgggg gatttattcg cctttgacca aacctacact gatcatttag atgcggtggt
    15241 ggatattatt gacggctcgt tcgcccaagg ttatcgctac attaccactt acctgaaaaa
    15301 tactgatttg attcgagtga caggctactt ggtgaaaaaa agcgaggttg aacgttatcg
    15361 caaaggcgaa gcggtattgc gtgataccac ttggtatggt tcaggcaccg atgattgtgc
    15421 gaaagtgttc gaccgccagc tgcgtgatga agaaaatgtg aatgcagggt aacaatggct
    15481 gcactttctg agatttttgt gccgttacac cgcattatcc ccttctcgaa tgtagaaggg
    15541 cagggcaatc gtaccagcat ttttctacaa ggttgcaagc tgaattgcct gtattgccat
    15601 aacccggaaa ccattccacg ttatagcaag gaagcaaaac aggttagctt gcaatacttg
    15661 tacgatcaag tgatggaggc agttcccttt attcgaggag tcactatttc gggtggagag
    15721 ccaaccattc atcataaaaa attagtgcca ctgttcgagg cgttgcgtga gcaagggcta
    15781 acctgttatt tagacagcag cggctttttt gattttgagg caacagagcc gttaattaat
    15841 gttaccgata aatttctgtt cgatctcaaa ggagatgggg cgggcttaca aacgctatgc
    15901 tttgatcgga aaaaccaagc cggcaaagtg cctgaacagg ctcttccaaa cgtgaatcat
    15961 attaaacctg aaaacttggc tcgcaatttg caaaatttag ccaaattatt accgcttgat
    16021 aaggtggaag aagtacgttt ggtttacctc aatgagtttt ataacgccca ccatttgctc
    16081 gaaaaagtgg ctgacctact taaaccttac ccagatgtac tacttaaaat tattcgggta
    16141 cacaccaaag gagcgagaga tgaaacaggc ttggctcgtt ttgtacccac tatcgagcaa
    16201 accgatgaac tggcagcatt tgcaaaacgg cacggtattc aaaaagttat tactatttac
    16261 taatggagac ttacgatgga tatactaatt agcataattg gtgtttttgt gttattaggc
    16321 ttaggtgttt tattatcaaa taatcgcaaa gccattaaat ttcgcacaat tttgggcgct
    16381 ttggcgattc aaattggttt tgccgctctt attctttact ttccagcggg aagaaatgca
    16441 ttgctagcta ctgcaaattg tgtgagcaat attattaatt atggtaacga aggtattagc
    16501 tttgtgtttg gcaatttagc gaatccgagt aatagcagca ttggttttgt gtttgcggtt
    16561 aaagtattgc ctattattat cttcttctct gcgttaattt caatgcttta ctaccttggt
    16621 gtgatgcaat gggtgattaa aattattggt ggagcattac aaaaaacact aggcacttcc
    16681 aaggcagaat caatgtcagc ggcagctaat tatttttgtt ggtcagacag aagctcctct
    16741 agttgtaaaa ccatacatta gccgtatgac agagtcagaa ttatttgcca ttatggttgg
    16801 tggaactgct tcaattgctg gttccgttat ggctggttat gccggaatgg gcgttccttt
    16861 aacttatctt attgcggcct cctttatggc tgcaccagct gggttactat ttgctaaatt
    16921 aatgtatcct caaacggaaa ccttggagag taaagcagat gacaatgttg aagttgaaaa
    16981 gccaaataac gtggttgagg ccctagctaa tggtgctagt gcaggtgtta ctttggctat
    17041 taatgtcggt gctatgttaa tagcatttat tgcagtgatc gctttattaa atggctttat
    17101 tggtggcatt ggtaattggt ttggttatga ggggctaacc ttacaaattt tattaggtta
    17161 tttattccaa ccacttgctt tcttaatcgg tgtgccgtgg caagatgccg atattgcagg
    17221 tcaaatgata ggtatgaaac ttgctgttaa tgaatttgtc ggatatcttg agtttgctaa
    17281 atatctacag cctgatgctg tggtgcaatt aagcgataaa actaaggcaa taattacttt
    17341 tgctttatgt ggttttgcaa actttagagc aattgcggta ttgattagtg gtatcggaag
    17401 tatggcacca agtcggcgtt cagatattgc tcgtttaggt ttaaaagcag tgattggcgg
    17461 cacattggcg aacttaatga gtgcaactat agcgggtttc tttattggtt taagtggtgc
    17521 cacattaggt tgatacaagc ggttaaattg actcactttt ttgcaaaaag cccaagtaag
    17581 ttaaatgact acttgggctt tgtttaatga actagctctt agtttcggtt tttgctgtgt
    17641 tatccttttc cgctttggct gtctgtgttt tcgaagttgt ctgttttttt gcggattggc
    17701 tagcagtagc tgcttttctt actttctttg ttttaacttc tacttccgca tttttagagt
    17761 ttttatccgc taaccatgcc tgcactttag ctaagaatat ttgtcccatc gggcgaggat
    17821 cgccagaaaa taatgtttgt aatttattat tttcaataat gtcgcgtcta attgctaagc
    17881 gttcttcgtg gttttccgct aaacgaatag cttgagtaac gtattcctct gctgtttggg
    17941 taattaacca attaggtagc ccgaggcgct taaataaacc ttcatcaata tgttcatgaa
    18001 cttcagggcc tgttttacag acaccaacta aaccaagcgt aaccatatcg ataatgccgt
    18061 ttgtatttcc aaatgggaat ggatttagca tcatatcgca attatgtaga atatttagat
    18121 attcatcata tggcgaatgt gggtgtgcgg ttgcatcatt tcctaaatag cttttgataa
    18181 aacgttccac ataaggatgc gtaattccac tagattgccc taatgcaaaa tggaaatgag
    18241 tttttacctt cgccctatca cgaatggctt ttaatgcctc taagaaatat gggtttaatt
    18301 tcatagtggt tgatgcaatt ccgatatgga taacctctgg attttcacgt aggttataga
    18361 ccacattttg aggcgctaat gcggaaggca catagggtag cgcatctttt ggaagacgta
    18421 ataattgttc actaaagcag ctttcggaac caacatagtc atcttctacg atgacatatt
    18481 caataaaatc agagtgtgta gttgccggat gacctagcgc aacagcttga attggtgcta
    18541 ggcgagtgtt actagcgaaa atagtggtta aatccattcc aatgctaggc atatagaata
    18601 cggctggatt atttttatca cagatatctt ttaaaaagct taagcggtca aatagtgagc
    18661 catcttgtgg taataaatga aattcgtcga atacctgttg ccccatttca tctacagcat
    18721 cactgcctag cccaataaga tggaaatgtt cgcgtgcagc aaccattgag gttgaatgag
    18781 tacgataaat agaatgtgat gaatggaaat gctccaataa tactaccatg acaggtttat
    18841 tatttctggt accaagctgt tcaatttttc tatcttccca accgacagaa agtaaatgac
    18901 gacgaattac agcatttaac gaccgtttta cattatgttt atttgcttca atatcataac
    18961 tgcaatgcat ataaacatcg tgtgaaatgg cgctcggtag cttgttcaag ttttcaattt
    19021 gcgctaattt ttctgggaac cattgcaaaa tagccgcgcg ttttgcaaaa gcagaggatg
    19081 taccaataaa tctaggtgat tggagtgcaa aacaaagtga tgcggtgaga tctgatgaag
    19141 cattccatgc agcatctaga ttcaataaaa tattagattc cggtaagtat aaaatacaga
    19201 acttaattag tgcttgtaat gtggcatcta aatcaaccgt atttggatta gcagattctt
    19261 tatttctatt gtaagtacgc aagatatggt ctgcgtttac gtatggagaa ctggcaaaaa
    19321 ttaatgctat ccagcgttgt aatgtcagaa aacgcatagc accgtgttcg gagatctcta
    19381 atgcaggatc ttcaaacaag cgagtaatcg ctaccgccat tcgagtacag aaatagatag
    19441 ctttatcatt ttctaaattt tcaatctgct ctggcatatt caattcaata ttggaaatgc
    19501 caccaaaatt actatctaat tttgaaagga tagacagtag ctcggtacaa gccgattcat
    19561 aatctttttt cgcgaccgcc tgctcaaaac ggatgacgct aggcatattt tctgctgaca
    19621 taatgtatcc ttagttgttt aaaattcccc acagatcata ctcatctgca tgtgtaatgg
    19681 ttactgaaat aatttgccct actgtcacta attggtttga aggattatct acatagacta
    19741 caccgtcaat ttccggtgca tctgccattg agcgaccgat aatgccttct tcgtcaatgt
    19801 catcaataat tacttgtacg gttttgccga tttttgcttg taagcgagca gcggaaattt
    19861 cttgttgtag ttgcataaaa cggtggaaac gttcctcttt tacttcttcc ggaacttgat
    19921 ccggcatatc ggtagcaaca gcaccttcca ctgggctgaa tttaaagcaa ccaacacgat
    19981 ctaattgtgc ttcttttaag aaatcgagta atagttggaa atcttcttct gtttcccccg
    20041 ggaagccgac aataaaggta gaacgcagag ttaattcagg gcaaatttca cgccattttt
    20101 taatgcgttc taaggttctt tcgattgaac ccgggcgttt catcgctttt aagattttcg
    20161 ggctggcgtg ttggagtgga atatccaaat acggcaaaat tttgccggca gccataagcg
    20221 gaattaaatc atctacgtgt gggtatgggt aaacatagtg caaacgcacc cacacgccca
    20281 ttgagcctaa ttgctcacat agcgtaatta aattactttt aatcggcata ccgttccaga
    20341 aaacggtttt ggttgcttct tcttttttgc gatctaacga ataggctgag gtgtcttgtg
    20401 agacgattaa cagctctttt accccggcat caactaggcg ttttgcttca tctaatactt
    20461 gcacgataga acggcttgct aaatcgccac gcattgaagg aataatgcag aaagtgcagc
    20521 gatgatcgca gccttcggaa attttcaaat aagcgtaatg cttcggtgtt aatttaatcc
    20581 cttgttttgg cactaagctg gtgtaagggt taaattccgg ttttggcaca tatttatgga
    20641 cgtggttcat taccgcctca tagctatgtg gccctgtaat ttccaatact ttagggtgta
    20701 cctcacgaat ttggttttct tttgccccta aacagccggt gacaattact tttccgttag
    20761 cttctaacgc ttcaccaatg ctttcaagag attcttgtac tgcggaatca ataaaaccgc
    20821 aggtgtttac aatcacaaga tccgcatttt cataactagg gatgatgtta taaccatccg
    20881 cacgcagttc ggtcaaaata cgttcggaat caactaaatt tttagggcag cctaagctga
    20941 taaaaccaat atttggtgaa gcactcatat aactctcaat aactaaaaag aaaaatgcct
    21001 acaatttttg tctgtaggca aaaaactaac aagattctac aaaatcttgc ccaaaatagc
    21061 gataacaagc ggtcaatttt taataaacat ttacaaactt gaaatttcgc taacaattaa
    21121 aattaatcga tattatttag cattgctaat acaatcgtgg aagatttttc tgcggctaat
    21181 ggcagaaatt cttcaaaaga aaggtgggat tctttgtccg ctacatccga tactgctctt
    21241 acgattacaa atggaaggtt aaaaccgtga caaacctgcg caatggctgc tgcttccatt
    21301 tcgactgcaa cgacattcgg gaaattctga cgaatttgat taatcttatc attaccgtta
    21361 ataaaggcat cgccgctaca gattaagcct gaaaccacat tgtaaccggc ttttttcgct
    21421 tccttttgag ctaattcgac taattgctcg tttggcgaaa atgttggcgg gtttgccggt
    21481 agttgcccga tttcataacc aaaggcggtc acatcaacat cgtgataacg aacttcggtt
    21541 gaaatcaaaa tatcacctac gtttaaatct ggatctaatc caccggcaga gcctgtatta
    21601 ataatcatat ccggctgggt gagctgtatc agtaaggtag tgccgatggc ggcagcaact
    21661 ttgccgatac ccgattgtaa taatgccaca cgggtattgt taattttgcc ttcaaaaatt
    21721 ttacaacctg ctaattcagt gactttaggt tcaaccatta cttggcgtaa aatctcaatt
    21781 tcttgtgcca tcgcaccaat aataccaatt ttcattactt tccttctcta atgtattgtt
    21841 tattttttga aaaaaacgct attttaacag cattaatagt gaggaggggg tgtttcttct
    21901 gcttgtgaag caacttggct tagttgagcc cctttcaatt tctcagcaat atggcgaatc
    21961 tgagtttgta acttatcaat tgcaaattgt tgctcaataa gtgcttgatt taactcttca
    22021 ataatcagct cttggaaagc aactttagtc tccaattcgg taatttttgc cgataatgta
    22081 taattattat ccatttttta ctaaaaaaag gttgtgtgaa aaggaattac actttaccct
    22141 atcttaaatt ttcttaacag ttatttttat aaggaaaaat tatgttaaaa accaaattat
    22201 cattatttac tcttattgtt ggcacacttt ttagtacaaa tgtgatggca gaagaaaaag
    22261 cagatcctaa atttgtggat gattcctctt atgccgtggg tgtattaatg ggtaaaaata
    22321 ttaatggtgt gattgagtca caaaaggata tttttaccta taaccaggat aaaatcttag
    22381 ccggtgttca ggacacctta aagaaaaccg gtaaattaac cgatgaagat ttgcaaaagc
    22441 agttaaaatc gttagatgcc tatttatctg cgaaagaagc aaagattaac gaagaaaaaa
    22501 ccaaagcaac ggtagctgca ggcgataaat tccgtgctga ttataaaaaa cagtctggcg
    22561 taaaagaaac ggcttcaggc ctgttatata aaattgaaaa agcaggtgaa ggcaattcac
    22621 caaaagcgga agatactgtg aaggtgcatt acaaaggcac tttgactgat ggcacggtat
    22681 ttgacagctc ttacgaccgt ggtgagccga ttgaatttca gttaaatcaa ttaattccgg
    22741 gttggattga agcgattcct atgttgaaaa aaggcggtaa gatggaaatt gtagtgccac
    22801 ctgcattagc ttatggtgat cgtgccgcag gcaaaattcc agcaaattca accttgaaat
    22861 ttgaaattga attattagat tttaaagcag cagatgctaa gaaataattc gttattcctt
    22921 aattattgaa gatacgtaag cggttagatt tattataata tttgcaaaaa atgtgataaa
    22981 actaaccgct tgtaatttgt attatgacca aaaaatttac gcctttttct gacgaagatc
    23041 acgccattct tgcttcttac tttccgatgg tagatgggat tgcggcactg attggtgagc
    23101 attgcgaaat tgtattgcat tcgttagagt ttctggaaca ttcggcaatt tatattgcta
    23161 acggacacaa tactaaccgt aaaatcggct ctccgattac tgaccgtgca ttgaaatcgc
    23221 tgcatcatat ggcaacggat agcgtctcca aaccttattt taccaaggca aaaggtggcg
    23281 ttttaatgaa gtctatcact attgcgattc gtaatggtaa acagcacgtt atcgggttac
    23341 tgtgcattaa tattaatttg gaagtgccta cctcacagtt tctcaattct tttattgccc
    23401 ctgtagatac cgcttcagaa gttacttttg ccagttcagt agaagatttg gtttcacaaa
    23461 cgattcaaac gaccattgat gatgtgatgg cagatcgtca aatttctaac aataataaaa
    23521 atcgtcaaat tgtgatttcg ttatttgaga aagggatttt tgatattaaa gattccatta
    23581 accaagtagc ggagaagctg gatatttcac gccatactgt gtatctctat attcgtcaaa
    23641 ttaagcagga caatgattaa tggattatgt attagcgata aaatcaccgg tttatggttc
    23701 acaaggggca tttttagcct accaagtggc ggaagaatta ttaaaagcca atcatacaat
    23761 ttgccaaata ttcttttttc aagaaggcgt gagcaatgct aatgccttag tgaatccagc
    23821 aagcgatgaa gtgaatttag tcgagatgtg gaaaaaattg gctaaattgc accgcttgcc
    23881 tctgcatttg tgcattgctg ctgcccagcg tagaggcgtg gtggatgagc aaatctcagc
    23941 taatgcaaca cataatttag ccgaaggatt taccctagcc gggttaggcg aatttagcca
    24001 agcagtatta aaagcggatc gattactgac tttttaagat gaagaaatat aaacttgcct
    24061 ttttatttac ccagccacct tttggttcgg cagttagccg tgaggggcta gatgccttgc
    24121 ttgcagctag tgctttttgt gacgagcaag agatagctat cctctttatc aatgatggcg
    24181 tatttaatct cattgccgat caacagccgg aaaaactctt acaaaaagat catatttcca
    24241 ccttcaaatt attggagttg tatgacttaa ctgaatgttt tatttgccaa gaaagtgtaa
    24301 gtttacgagg gctggataat gcagattggt tactgcgaat gcttcaattt aaaactcacg
    24361 ctgagatgat cgcattgctc aatcaagctg aaaaagtaat gacgttttaa ggaatattta
    24421 tgctttatac cctttccaaa gcgaattatg atgaagaaac cttaaacttc tttttctcac
    24481 atcttagtga gaacgatgcg gttgttctgt ggcaagatgg cgtgctacaa gcggtcaaaa
    24541 gtccgcaatt ttttgcaaaa ttgccccgtt gctatttatt ggcacaagat gtgcaagctc
    24601 gaggattgca agagaagctc actgcatttc agtgcatttc attatccgaa ttagtcaaat
    24661 taacagcggt ttattttccc caggttgcac tgtaacctag agaggatatt ttttgtaata
    24721 ccaaataatt tagattatga tgtgattcct aaaaaggaga atattatgaa aacaaaatgt
    24781 cttattccgc tactagcact tacacctgtt atggtgatgg cagaagaaaa taacacttgg
    24841 gtagacaaga aacatgaaac agtaagcact accttagatc gttgggcaaa caatattaac
    24901 agttggctag gtgatgcaga cccagataaa ccgggaacgg cttctttacg ggtaatgtta
    24961 gatagccgtt gggataaaca cgataaattt acttataagc cccgtgttcg tggtaaaatc
    25021 aaactcccta tcttgaaaaa gcatctaaat gtcgtatttg gtgatgacga actggataat
    25081 gagcttaccg ataaaaatca tgctggaaaa ttgtataaaa acgtcaatcc aaataaacgc
    25141 tataactctc gtgaagcgag agattcgaac tcttctatcg gtttacgttg gtctgatggc
    25201 attaaggctt tagggattga gaccgattta gatgctggta ttcgttcggg aagcgatatt
    25261 ttcgggcgtt tacgcatcag taaagattgg aaaatcaccg accagttcag tacccgccta
    25321 gagcaaattt atcgttacgg ttcagagagc aagcactatt tacgtactaa ctttgaaaat
    25381 aaatataccg aaacggatac cacctttatt atgaaccaca ccaattttga atatcgtcat
    25441 gatgtagatg aagaaagaag ttgggggaat agtttatatc gtcaacataa cttcaaacca
    25501 ctcacgcaca tcagctatgg tatcagtatg ggggggcgtt tagataaaga gttatcaaaa
    25561 tttaactatt ggggtccatt tgtctcctat cgtcaaccaa tctggcgcaa ctggctcttt
    25621 atccagcctg aaatcagttt ttataacgac aaagataaag atcgtaagca ctttattcag
    25681 acatttgtac gtttagaggc tatcttctag ctattaagcc tcaagtagaa tcttggggct
    25741 tgtttttgca agcggtcaat ttcttgccaa aatttacaaa atccgctata attcctaacc
    25801 atttttagca aaaattggct gacggcttga ccggtcagcc ttttgtgctt gaacgcaagg
    25861 gctgattttg tcattttaat cagcaaaatt tgcaaatttc ctgcccaatt tgaccgcttg
    25921 cagtagcgat ttctgactgc ttgattggcg attggaaaat gacatctcgt acagttttta
    25981 taatgccact tccaaccgag tctttcgtgt cggattgtgt aatctcaacc aaaatatatt
    26041 tcagaggcta tcttaaaaaa tggcatattc atattccgag aaaaagcgta tccgtaagag
    26101 ctttggcaaa cgcccacaag ttctgaacgt accttatcta ttaacaattc agcttgattc
    26161 ttttgaaaaa tttatcgaaa aagatcctga agggcagcaa ggtttagaag cggcattccg
    26221 ttctgttttc ccgattgtga gcaacaatgg tgcaacagaa ttacaatacg tttcttacga
    26281 attaggcgag ccggtgtttg acgtgcgtga gtgccaaatt cgtggtacaa cctacgctgc
    26341 accattacgc gtgaaattgc gtttagtctc ttacgatcgt gaagccgcag ccggtacggt
    26401 aaaagacatt aaagagcaaa acgtgtatat gggcgaaatc ccattaatga ccgataacgg
    26461 tactttcgtg attaacggca ccgagcgtgt tatcgtttct caattacacc gtagcccagg
    26521 tgtgttcttc gattctgaca aaggtaaaac ccactcttcg ggtaaagtgc tttataacgc
    26581 acgcattatc ccttaccgtg gttcttggtt agatttcgag tttgatccga aagataactt
    26641 atttgcccgt atcgaccgcc gtcgtaaatt gccggcaacc attattctac gtgcattagg
    26701 ctacaccacc gaagaaatct taaatttatt cttcgagaaa attaaatttg aaattgccga
    26761 taataaatta ttgatgacgt tagtgcctga gcgtttaaga ggcgagactg catcatttga
    26821 tattgcagca aacggcaaag tatatgttga aatgggtcgc cgtattaccg ctcgtcatat
    26881 ccgtgcgtta gaaaaagaca atgtgaccca aattgaagtg ccggtggaat atattgtcgg
    26941 caaagtagcg gctcaagatt acgttgattt atcttcaggt gaagtgattt gcccggcgaa
    27001 tatggaaatc tcgatggaga tgttggcgaa tttatcacaa gccggttaca accagatcga
    27061 agtattattt accaacgatt tagaccacgg tccatatatt tctgaaacct tacgtgttga
    27121 tccaacttac gaccgtttaa gtgcgttggt tgaaatctat cgtatgatgc gtccgggcga
    27181 accaccaacg aaagaagcgg cagaagcatt attcgataat atgttcttct cggcagagcg
    27241 ttatgattta tcggcagtag gtcgtatgaa attcaatcgc tcgttagaaa ttccggaagg
    27301 cgtaggcagc ggtattttaa gcaacgatga catcatcggt gtgatgaaaa aattaatcga
    27361 aatccgtaac ggtcgtggtg aagtggatga tatcgaccac ttaggtaacc gtcgtatccg
    27421 cagcgttggt gaaatggcag aaaaccaatt ccgcattggt ttggtgcgtg tagaacgtgc
    27481 ggtgcgtgag cgtttatctt taggcgattt agatggtgta acaccacaag atttaatcaa
    27541 cgctaaaccg atttcagcag cagtgaaaga gttctttggt tcatcacaac tttcgcaatt
    27601 tatggaccaa aacaacccgc tttcagaggt aacacataaa cgccgtatct cggcattagg
    27661 cccgggtggt ttaacccgtg agcgtgccgg ctttgaagtg cgtgacgtac acccgactca
    27721 ctatggtcgt ttatgtccaa tcgaaactcc tgaaggcccg aatatcggtt tgatcaactc
    27781 actatcggtg tatgctcgta ctaataacta cggtttctta gagactccat tccgtaaagt
    27841 ggtgaatggt caagtaaccg aagagatcga gtatttatct gcgattgaag aaagcaacaa
    27901 tatcattgca caggcgaact caaacttaga tgagaacttc cgttttaccg atacttatgt
    27961 aacttgccgt cagcaaggcg aatcgggctt attcaaaccg gaagaagttc aatatatgga
    28021 catctcaacc caacaagtgg tttctgtggc tgcggcgtta attccgttcc ttgagcacga
    28081 cgatgcgaac cgtgcgttaa tgggtgcgaa catgcaacgt caggcagttc caaccttgcg
    28141 tgcggacaaa ccattagtcg gtaccggtat ggaaaaacca attgctcttg actcaggtgt
    28201 agcgattgtc gcaaaacgtg gtggtacggt gcagtatgtt gatgcgtcac gcattgtagt
    28261 gaaagtaaat gaagatgaaa ccattccggg cgaagcgggt atcgatattt ataacttaat
    28321 caaatacacc cgttcaaacc aaaacacctg tatcaaccaa gtaccttgtg tgaacttggg
    28381 tgagccggtt gctcgtggtg aaatcttagc ggacggtcct tcaacagact taggtgaatt
    28441 ggcattaggt caaaatatcc gtgtggcatt tatgccttgg aacggttata acttcgaaga
    28501 ctcaatgtta gtttctgagc gtgtggtaca agaagatcgc tttaccacta tccacattca
    28561 agaattatct tgtgtggcgc gtgataccaa attaggtgca gaagagatca ccgctgatat
    28621 tccaaacgtg ggtgaatctg cattaagcaa attagatgaa tcaggtatcg tttacatcgg
    28681 tgcagaagtg aaaggtggcg acatcttagt aggtaaagta actcctaaag gtgaaaccca
    28741 attaacaccg gaagaaaaac tattgcgtgc gatcttcggt gaaaaagcct ctgatgtgaa
    28801 agattcatca ttgcgtgttc caaacggtac ttcaggtacg gttatcgatg ttcaagtatt
    28861 tacccgtgat ggcgtagaga aagataaacg tgcgaaagaa atcgaagaga tgcaactgtg
    28921 tgaagcgaag aaagacttag cggaagagtt ggaaatctta gaagccggtt tatttactcg
    28981 tgttcgcaac ctattaattg aaggcggcgt aaaagaatct gcattagatg gcgttgctcg
    29041 tgaaaaatgg ttagaacaaa cccttgaaga cgaagcgaag caaaatcagt tagaacagtt
    29101 agcggaacag cacgaagagt tacgcaaaga atttgaacgt aaacttgaga tcaaacgcaa
    29161 caaaattatc caaggcgacg atttagcacc gggtgtgtta aaagtagtga aagtttacct
    29221 tgcggtgaaa cgccaaatcc agccgggtga taagatggcg ggtcgtcacg gtaacaaagg
    29281 ggttatctcg aaaatcaacc ctgtggaaga tatgccatac gatgaaaacg gtcagccggt
    29341 tgaaatcgta ttgaacccgc tgggcgtacc gtctcgtatg aacatcggtc agatcttaga
    29401 aacccactta ggcttagcgg ctcatggtat cggtgatcag attgataaga tgatcaaaca
    29461 gcaacaagaa gtggctaaat tacgtgaata tatgcaaaaa gcctacgatt taggtcacgg
    29521 ctcacaagtc gttgatttaa gcactttctc tgatgaagaa gtgatgcgtt tagcgcaaaa
    29581 cttacgcaaa ggcttaccgc ttgctactcc ggtattcgat ggtgcacacg aaagcgaaat
    29641 caaaggctta ttagagttag gcggcttacc gacttcaggt cagatcacac tttatgatgg
    29701 tcgtaccggt gagaaatttg agcgtccggt aaccgttggt tatatgtata tgctcaaatt
    29761 gaaccacttg gttgatgata aaatgcacgc tcgttcaacc ggttcttata gccttgttac
    29821 tcaacaacca ttgggtggta aagctcaatt cggtggtcag cgtttcggtg agatggaggt
    29881 ttgggcatta gaagcatacg gtgcggctta tactcttcaa gaaatgctta cggtgaaatc
    29941 ggacgatgtg aacggtcgta cgaagatgta taaaaacatt gtagatggta cacattatat
    30001 ggagccgggt atccctgaat cctttaacgt aattaccaaa gagatccgtg cattagcaat
    30061 tgatatggag ctggacgaag cgtaatggtt tcactctccc ccttgatggg ggagagacag
    30121 gcaaaggatt tgttcagaat cctttggcag agagagggtg atgcaagcgg tgtaaatttg
    30181 ctaaattttt gcaaaaatcg accgcttacc ctctccctga ttttgcttct gaacgaggca
    30241 aaatctatcc ctctcccaca aggggagagg gtttaaaatc gcaaccaaat tcgtagagtg
    30301 gatattcttt ccaccaaaca aaacaacctc aaactagggg caaaaaagtg aaagacttag
    30361 tgaagttttt aaaagcacaa acaaaatcga acgaagattt tgatgtgatt aaaattggtt
    30421 tagcatcacc ggacaagatc cgttcttggt cttttggtga agtgaaaaaa ccggaaacca
    30481 ttaactatcg taccttcaaa ccggagcgtg atggtttatt ctgtgcacgt attttcgggc
    30541 cggtaaaaga ttacgagtgc ttgtgtggga aatacaaacg tttaaaacac cgtggcgtaa
    30601 tttgtgaaaa atgtggtgtt gaagtaaccc aaactaaagt acgtcgtgag cgtatggggc
    30661 acattgaatt agcttgccct gtcgcacaca tctggttctt aaaatcacta ccgtcccgta
    30721 tcggtttaat cttagatatg ccgttgcgtg atattgaacg tgtgctttat tttgaatctt
    30781 atgtagttac tgaaccggga atgaccgatt tagagaaaaa tcagttatta accgaagaac
    30841 aatttatgga cgctgaagag cgttggggtg atgaatttga agcgaaaatg ggtgcagaag
    30901 gtatccaagc attacttcgt gatttagatt tagaacacca atgcgaaacc ttgcgtgaag
    30961 agttacaaga aaccaattca gaaaccaagc gtaaaaaaat cactaagcgt ttaaaaacct
    31021 tagaagcatt cttacaatcc ggcaacaaac cggaatggat ggtgatgaca gtattaccgg
    31081 tacttccacc ggatttacgt ccgttagtac cgcttgacgg tggacgtttt gcgacttctg
    31141 acttaaacga tttataccgc cgtgtaatta accgtaacaa ccgtttaaaa cgcttgttag
    31201 atttagttgc accggacatc atcgtgcgta acgaaaaacg tatgttacaa gagtcggttg
    31261 atgcgttatt agacaacggt cgccgtggtc gtgcgattac cggttcgaac aaacgtccgt
    31321 taaaatcttt ggcagatatg atcaaaggta aacaaggtcg tttccgtcaa aacttattag
    31381 gtaaacgtgt agattactca ggtcgttcgg taattaccgt aggcccatac ttacgcttac
    31441 accaatgtgg tttaccgaag aaaatggcgt tggaattatt ccgtccgttt atctactcaa
    31501 aattagaaaa ccgtggcatt gcttcaacta ttaaagccgc gaagaaaatg gtagagcgtg
    31561 aagatcctat cgtatgggat attcttgccg aagtgattcg tgaacacccg attctactta
    31621 accgtgcacc aacacttcac cgtttaggta tccaagcgtt tgagccgtta ttgattgaag
    31681 gtaaagcgat ccagttacac ccactcgtgt gtgcggcgtt caatgcggac ttcgacggtg
    31741 accaaatggc ggttcacgtt ccattaaccc ttgaagcaca gttagaagct cgtgcgttaa
    31801 tgatgtcaac caacaacgta ctttcaccgg caagtggtga tccgattatc gtaccgtctc
    31861 aggacgttgt actcggtctt tactatatga cccgtgagaa agtaaacggt aaaggtgagg
    31921 gaatgtactt ccttgaccct cgtgaagcgg aaaaagcata ccgtaccggt caggctgaat
    31981 tacattctcg tgttaaagtg cgtgttactg aatatgagaa aaacgaagca ggcgaattag
    32041 aagcaaaaac ttcgttagta gataccacca ttggtcgttc aatcttatgg atgattgcac
    32101 caaaaggtat gccgtttagc ttgttcaacc aaaccttagg caaaaaagcg atctcgaaat
    32161 taattaacga gagctatcgc cgtttaggtt taaaagaatc tgtggtttta gctgaccaaa
    32221 ttatgtacac cggctttgct tatgctgctc gttctggtgc ctcagtaggt atcgacgata
    32281 tggtaattcc ggagcaaaaa tacgcaatca ttgaagcggc tgaagcggaa gtcgctgaga
    32341 tccaagagca attcaacggc ggtttagtaa cagccggtga gcgttataac aaagtgatcg
    32401 atatttgggc tgctgcaaac gaacgtgttg cgaaagcaat gatggaaaac ctttcaacgg
    32461 aagaagtaat caaccgtgaa ggtaatccgg aaaaacaagc ctcatttaac agtatcttta
    32521 tgatggcgga ctccggtgct cgtggttctg ctgcacagat tcgtcagtta gcgggtatgc
    32581 gtggcttgat ggctcgtccg gacggttcga ttatcgaaac cccaattact gcaaacttcc
    32641 gtgaaggttt gaacgtatta cagtacttta tttcaaccca cggtgcacgt aaaggtcttg
    32701 ccgatacggc attaaaaaca gcgaactccg gttacttaac ccgtcgttta gttgatgtgg
    32761 cacaagattt agttatcatt gaagatgact gtggtacgca cgaaggtatc gtgatgacac
    32821 cacttatcga aggtggtgat gtgaaagaag ccctgcgtga tcgtgtatta ggtcgtgtgg
    32881 tggcagaaga tgtgttaaaa ccgggtacag atgaagtatt aattccacgc aacaccttat
    32941 tagatgaaaa atggtgtgat gtggtggatc gtgaatctgt ggatgtgatc aaagtacgtt
    33001 cggtagtaac ttgtgataca gacttcggtg tgtgtgctaa atgttacgga cgtgacttgg
    33061 ctcgtggtca cttaatcaac caaggtgaag cggtcggtgt tattgcggca caatctatcg
    33121 gtgagccggg tacacagtta acgatgcgta cgttccatat cggtggtgcg gcttctgcgg
    33181 cagcaaaaga atctagcatc caagtgaaaa acgcaggtac gattaaatta accaacgcta
    33241 aatttgtaac caacaaagaa ggcaaaatcg tattaacttc tcgtaatact gaattaactg
    33301 tcatcgacac cttcggtcgt accaaagaaa actataaagt gccttatggt gcggtgcttt
    33361 ctaaacacga cggtgcagaa gtggctgtgg gtgaagtggt tgcgaactgg gatccgcaca
    33421 caatgccggt aatctcagag gtatcaggtc gtatccaatt tagcgacatc gtagatggct
    33481 taaccgttac tcgccaaacc gatgaattaa ccggtttatc atctatcgtg gtgcaagatg
    33541 tgggtgaacg tgcaaccgca ggtaaagatt tacgtccggc attacgctta gttgatagca
    33601 acggcaaaga catcttaatt ccgggtacag acgttgcagc acaatacttc ttaccgggta
    33661 aagcaatcgt aaccttagac gatggtgcag aaattgaagt cggtgaagcc ttagcccgta
    33721 ttccacaaga atctgtgggg acgaaagata ttaccggtgg tcttccacgc gtagcagact
    33781 tattcgaagc ccgtaaaccg aaagagccgg caatcttggc ggaaatttca ggtattgtgt
    33841 cgttcggtaa agaaaccaaa ggtaaacgcc gcttggtaat tactccggcg gaaggcgaag
    33901 cgtttgaaga gatgattcca aaatggcgtc agctcaacgt atttgaaggc gagatggtac
    33961 aacgtggtga tgtgatatca gacggtgcag aaactccgca cgacatctta cgcttacgtg
    34021 gcgttcacgc cgttaccgac tacatcgtaa acgaagtgca agaagtttac cgcttacaag
    34081 gggtaaaaat taacgacaag cacatcgaag tgattgttcg ccaaatgttg cgtaaagctg
    34141 tgatcaccaa cgcttacgac tctgaattct tagagggcga acaagtggaa gtggctcgtg
    34201 tgaaaattgc caaccgcaaa cgtgctgaag aaggcaaacc gttggtagaa tttgaacgtg
    34261 aattgcttgg tattaccaaa gcatctcttg caacagaaag ctttatttct gcagcctcgt
    34321 tccaagaaac cactcgagtg cttaccgaag ccgcagtggc aggtaaacaa gatgaattgc
    34381 gtggcttaaa agagaacgta atcgttggtc gcttaatccc ggcaggtacc ggttttgctt
    34441 accaccaagc acgagctaaa aaacgtgccc aactggaagc aggaattgca gttgtccctg
    34501 aatttgaagc accggcagct aaagccaatt cattcgttac cgatgcagac atcgaagctg
    34561 aatttgaatt tgttgcagac gatgcaaccc aaagtttagc agcgttgtta aatgcgggtg
    34621 aggaagagta atagctcgta gggtatgata aattaaaaaa tctcctagaa tataatttct
    34681 aggaggtttt ctacttgaat ataagggaaa aatatataga atgtaagggc ttattcaatt
    34741 tgtggataag gtaatcaaca gtatgtcaat agttgataac atttcataaa gcgtttcagc
    34801 tactgaacat aaactaataa agaatttgat aatgattatt gtcatattag attccttgtg
    34861 agttataata gttgattgat tattataata tatatttagc agatagcggt ttattcgacg
    34921 ggtatcctaa ggtacctagg ctatataaag actgttaact attcaaatag ttagggacaa
    34981 ccgcaatcct tagtctttag ttttgctttc attaaatttt ctattatgga tatatcttgg
    35041 tataagcctc gtaattactt acatttcgat tcacccataa ctcttcaaca agcaattaaa
    35101 ttagtcgcta atccaaataa tgtagtaaaa catagtttct acccattctt atcttataca
    35161 ctatctgtgg ctaaaataaa aaaggataaa aatgaaggta aattagtacg tttaataaaa
    35221 aatagaggaa tatcttattc atctca
//
LOCUS       DANLXD010000010        34877 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.010, whole genome shotgun sequence.
ACCESSION   DANLXD010000010 DANLXD010000000
VERSION     DANLXD010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 34877)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34877)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34877
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.010"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            4..600
                     /gene="nfuA"
                     /locus_tag="PXD18_000397"
     CDS             4..600
                     /gene="nfuA"
                     /locus_tag="PXD18_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S biogenesis protein NfuA"
                     /protein_id="HDL6300862.1"
                     /translation="MEEQTIHISISDAAQAHFARLLEQQEEGTNIRIFVVNPGTPGAE
                     CGVSYCPPNAVEETDTEFKFNRFSAFVDDISLPFLDEAEIDYVTDPMGSQLTLKAPNA
                     KMRKVADDAPFIERLDYVIQTQVNPQLASHGGKVTLIEITEDKYAVLQFGGGCNGCSM
                     VDVTLKEGIEKQLLAMFPDELVGVKDITEHQHGEHSYY"
     gene            complement(768..2405)
                     /gene="pyrG"
                     /locus_tag="PXD18_000398"
     CDS             complement(768..2405)
                     /gene="pyrG"
                     /locus_tag="PXD18_000398"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase (glutamine hydrolyzing)"
                     /protein_id="HDL6300863.1"
                     /translation="MTTNYIFVTGGVVSSLGKGIAAASLASILEARGLNVTIMKLDPY
                     INVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFIRSKMSKANNFTSGKIYSEVLRK
                     ERRGDYLGATIQVIPHITNEIKARVLEGGKGRDVAIVEVGGTVGDIESLPFLEALRQL
                     AVDIGREKTLFMHLTLVPYIPTAGEVKTKPTQHSVKELLSIGIQPDVLICRSDRAIPE
                     NEKKKIALFCNVPERAVISLKDVDSIYRIPELLKSQGLDSFVCDRFRLDCKEADLSEW
                     EQVLYCQANPTGEVTIGMVGKYVELPDAYKSVNEALKHAGLTHRLTVNIKYIDSQDIE
                     TKGTELLAGLDGILVPGGFGYRGVEGKIRTAQYARENKIPYLGICLGMQIALIEYARN
                     VAGLTEANSSEFDKDCSQPVIGLITEWQDAEGNVETRSDESDLGGTMRLGSQQCHLIE
                     GSKARELYGAETIVERHRHRYEVNNKLLPQIEAAGLKVSGLSADRKLVEIIEVPNHPW
                     FIAAQFHPEFTSTPRDGHPLFAGFVKAAKDHQESRKA"
     gene            2669..3718
                     /gene="ansB"
                     /locus_tag="PXD18_000399"
     CDS             2669..3718
                     /gene="ansB"
                     /locus_tag="PXD18_000399"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparaginase 2"
                     /protein_id="HDL6300864.1"
                     /translation="MKIKKLLLPTLLSIATMPIQAADLPNITILATGGTIAGSQKNTA
                     TSAYQAGQLNIETLIEAVPDIKKLANIKGEQIVKIGSQDMSDEVWLKLAKAINQQCPN
                     TDGFVITHGTDTMEETVYFLDMTVKCEKPVVLVGAMRPATEKSADGVLNLYNSVVVAK
                     DSKSSGRGVLVAMNDIVLGARDVTKTSTTSVQTFNSPNFGALGYIHNSKVDYERSPES
                     KHTVNTPFKVDELTELPKVGIIYAYSNMPTEPLQALLDASYQGIVVAGVGNGNMNAAN
                     LALLEEAAKKGITVVRSSRVPTGYTTRDAEIDDSKYGFIASGTLNPQKARVLLQLALT
                     QTNDIKTIQQYFEDF"
     gene            complement(3792..4436)
                     /locus_tag="PXD18_000400"
     CDS             complement(3792..4436)
                     /locus_tag="PXD18_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300865.1"
                     /translation="MRIWQKLASVIVVTLGLISNASAENFKLKYSSNYLMPAYINFNN
                     GGGQYNIQAKINVPLYNIVFSAKGTEKNEQFHMLSYRDTRNGKTYAMAEIDSKTVKYG
                     KVKEPLKEEALTMPTYDLFTTAFQLSYYDKLPSSFQTTNGKKLYPTPNVQLRKAQKEV
                     KVGGKTYQEITYKFRTSDKKDITVKKFEGEKFPRYIAYSRDGDNYELTFDSFVK"
     gene            complement(4437..5420)
                     /gene="cysB"
                     /locus_tag="PXD18_000401"
     CDS             complement(4437..5420)
                     /gene="cysB"
                     /locus_tag="PXD18_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CysB"
                     /protein_id="HDL6300866.1"
                     /translation="MKLQQLRYIVEIVNQNLNITEAAEVLYTSQPGISKQVRLLESEL
                     GINIFERNGKHVKGLTPAGEKIVAIARELLVKAQSIKSVAEEQTRPNKGILRIATTNT
                     QARYMLPSVIEKFKARYPEVSLHLHQGSPNQIYDALVAGEVDLAITTEAQYLFDEAVL
                     LPCYWWNRSVIVKPEHPLAAFVNQSKNLTVEQLGRYDLITYTFGFTGQSDLDHAFNKE
                     GILPNIVFTATDADVIKTYVRLGLGVGIMASMAHTETDKDLVAINASHLFQPSMTQIA
                     FKRGTFLRNYMYDFINYFSPHLTRVQVEKAEQLRDNNAISRLFESISLEEK"
     gene            complement(5417..6100)
                     /gene="yjjG"
                     /locus_tag="PXD18_000402"
     CDS             complement(5417..6100)
                     /gene="yjjG"
                     /locus_tag="PXD18_000402"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HDL6300867.1"
                     /translation="MKYQWVLFDADETLFSFNSYLGLKAMLARYQIDFSEQDYQDFQA
                     VNKPLWVAYQNNEITAQDIQTRRFVKLSAQTGVDPLQLNQELMAEMAFVSQPLEGVMD
                     MLNALYGKVKMGIITNGFTDLQQKRLDNTQTSHFFDIVVISEQIGAAKPDRQVFDYAF
                     ALMDEFDRTKVLMVGDTLASDILGGNNAGIDTCWLNLLSKENDTDIKPTYEVHTMQQI
                     IAIVEGKSL"
     gene            complement(6176..7069)
                     /locus_tag="PXD18_000403"
     CDS             complement(6176..7069)
                     /locus_tag="PXD18_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GcvA"
                     /protein_id="HDL6300868.1"
                     /translation="MNKKLPPLNALKAFESAARHLNFTKAAEDLFVTQAAVSHQIKLL
                     EDFLGASLFHRRNRLLELTELGAQYFYEVQPLLEQIALATDKIRQQSSRQILTISVPQ
                     TFGMHWLVPRLADFHEKYPEVEVRIKGVDQDEGLLGKETDVAIYYGKGDWQGLESIRL
                     TESRIVILASPEYLSQNTIHLPADLAGKHLLHSSTHNKWKRMVEHLHIEDIVDAETGS
                     IFSHTFMVLQAAMHQQGIAIANQLLAQHEIEKGTLIEPFPTTLFDEKSFYVVYPSQSA
                     QVQKVQFFVEWIQQKMKECCA"
     gene            7515..8552
                     /gene="rsgA"
                     /locus_tag="PXD18_000404"
     CDS             7515..8552
                     /gene="rsgA"
                     /locus_tag="PXD18_000404"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small ribosomal subunit biogenesis GTPase RsgA"
                     /protein_id="HDL6300869.1"
                     /translation="MSKPKLTHNQQRRIQSNHHKRINKKEIEWQDEMLGEMQQGIVVT
                     RHVKHADVETAEGQIFRCNIRRTLKNVVVGDQVSWRKGSEQLQGISGVIEAVFPRKNE
                     LTRPDYYDGIKVMASNIDQIIIVSAVLPTLSLNIIDRYLVICETANIPALIVLNKIDL
                     LNESERQAVKEQLKIYEEIGYETLCLSADTGENMQALHQYLAKGTSIFVGQSGVGKSS
                     LINQLLPEVNALTGSVSDNSGLGQHTTTASRLYHLPQGGQLIDSPGIREFGLWHLEPE
                     QITLGYREFQSVLGTCKFRDCKHKTDPGCALRQEVENGEISAIRFENYHRLIESLSET
                     KSQRHFRKEEV"
     gene            8549..9148
                     /gene="rnhB"
                     /locus_tag="PXD18_000405"
     CDS             8549..9148
                     /gene="rnhB"
                     /locus_tag="PXD18_000405"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HDL6300870.1"
                     /translation="MMNEFIYPNARLIAGVDEVGRGPLVGAVVTAAVILDPNNPIQGL
                     TDSKKLSEKKRQALAEEIKAKALSWSLGRAEPTEIDELNILNATMLAMQRAVAGLHIQ
                     PDFVLIDGNRPPKLPMPAQAVVKGDSLVAEISAASIIAKVARDQEMDELDQQFPQYGF
                     AQHKGYPTKLHFEKLAEFGATPYHRKSFAPVRKVLGLID"
     gene            9161..9520
                     /locus_tag="PXD18_000406"
     CDS             9161..9520
                     /locus_tag="PXD18_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HDL6300871.1"
                     /translation="MTTEYQKTIFTKIINKEIPANIVYQDELVTAFRDIAPQAPTHIL
                     IIPNKFIPTVNHVSNEDELALGRLFTVAAKLAQEEGIAEEGYRLVMNCNKNGGQEVFH
                     IHMHLLGGQKLGPLVAK"
     gene            9523..9894
                     /locus_tag="PXD18_000407"
     CDS             9523..9894
                     /locus_tag="PXD18_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HDL6300872.1"
                     /translation="MRISYFAFAIFSIFLTACGSKPVSYLPTGSEPIVNIESDIAEKI
                     ELETNSKQFSTTNLTEFPLNLTYKLFWYNKDGVTQSHNGISDSIGWQHLWLQPKQKQT
                     IALIKPTEESHNYRLYLRGVK"
     gene            complement(9929..10558)
                     /locus_tag="PXD18_000408"
     CDS             complement(9929..10558)
                     /locus_tag="PXD18_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL6300873.1"
                     /translation="MFNLQIIPVSPFQQNCTVIWDENKNAAIIDGGDNAEGIIQFVES
                     QQLKVQKLLITHGHLDHIMAVEKLREHFQVEVFGSHLADKPLFERLPEMCQQFGLPPV
                     NGFLPDHWLEEGDRVEVGELSYTVRHLPGHAPGHIGFFDFDNRIAFSGDVLFQNSIGR
                     TDLYLGNHSQLLETIREKMFDLDDDFIIIPGHGPHTTIGREKQTNPFLK"
     gene            complement(10575..11129)
                     /locus_tag="PXD18_000409"
     CDS             complement(10575..11129)
                     /locus_tag="PXD18_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbK family protein"
                     /protein_id="HDL6300874.1"
                     /translation="MKQINVQRRKWLSLGGLVLGASLLPGQVMAALSTPAPAALRFRN
                     VNTGDTYTAKFGAGGLNKTDLSQLNYLMRDRHINQVKAIDPKLFVKLNQLQRRLGFHN
                     AEILVLSGYRSAQTNARLRRRSRGVASHSYHILGQAVDFQVSGVPLYKVKQAAESLNN
                     GGVGYYPRSNFVHVDTGPVRTWRG"
     gene            complement(11299..12804)
                     /locus_tag="PXD18_000410"
     CDS             complement(11299..12804)
                     /locus_tag="PXD18_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010129962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HDL6300875.1"
                     /translation="MVAFSGMALAETATVAQVASEPVVQDNILPQLSFAAQQARAAEL
                     VKQADYALEQEQIRQEQARKFAEAEARIKQEIGNNALLLSQATTKVYLDSEFATMWND
                     KAAEKAFLKEYALFAVSGVSSKSAKALQQILNQPEGLGRDILLTDGFLDYLYYNKNVF
                     KNANNWLYNLGSYVPKSPSSEQIFQWTNAVREGDSGQFVTDLVPRNHLYRDTAQRVLA
                     MAGGSSAPKAKKGKAVTEVAGGGNGASFYKLALNAQRLRIIPSFNNGIFVNIPSYQLY
                     YFRDGNLALQSKVIVGREDRRTPVMYSKLSNVVVNPPWNVPTSIMTKDIIPKLARDPG
                     YADRASFEILDSSGNKINPRSVNWSQYLNAKSSPYRIRQKAGDDSALGRYKFNMPSSD
                     AIYLHDTPNRGLFGKTGRALSSGCVRVEKSDELATILLKEAGWGSDKKNQVLGSKKTT
                     SAQIRSDNPVYLYYVTAWVEGGKVQTLPDIYNFDAKIPQHSVNWGKLKSII"
     gene            complement(12922..14934)
                     /gene="prc"
                     /locus_tag="PXD18_000411"
     CDS             complement(12922..14934)
                     /gene="prc"
                     /locus_tag="PXD18_000411"
                     /EC_number="3.4.21.102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy terminal-processing peptidase"
                     /protein_id="HDL6300876.1"
                     /translation="MKLTRLNKIFALALGLMIGNAFAVQPDIKESAIVMPKPNEQHSL
                     STKRVTARLTQSHYHKFQLNDEFAGKIFNRYVDWLDPSHNTFLQADIDEMRSKYATTL
                     DDDLYAGKLDAAFAMYELMSKRRYERYSYALSLLDKEPDLKGNDEIEIDREKAAFPKS
                     VEEANTLWEQRVKNDIINLYLKDKKWPEIKKTLTKRYNFAIKRLTQVKADDILQTYLN
                     SFSREIDPHTSYLSPRAAKAFQESMNLSLEGIGATLTQEDDVTSIRALVPGAPAAKSK
                     KLVVGDKIVGVGQGERGEIEDVIGWRLDNVVDKIKGKKGTKVRLEIEPEKGGKTKIIT
                     LVRDKVRIEDSAAKLTVEKVDGKNVGVIKIPTFYIGLTSDVRKLLTQIEKKNVEGLII
                     DLRENGGGSLTEVIELTGLFIKDGPVVQVQDAFNRIKVHEDPESKSVYDGKVMVMINR
                     HSASASEIFAAAMQDYNRAIIVGQQTFGKGTVQQSRSLNFVYDLDQEPLGFIQYTIQK
                     FYRINGGSTQLKGVEADIKFPEIINAAKTGESFEDNALPWDKIPAANYKEAGNARNAV
                     AALTAKHQERIAKNPEFIVLNENIAIRKERDERKFLSLNLEERLKENKADESKRLKDI
                     NARFAREGKKALKDIDDLPKDYEAPDFFLKEAEQMMLDWSEFDKKS"
     gene            complement(15020..15556)
                     /gene="proQ"
                     /locus_tag="PXD18_000412"
     CDS             complement(15020..15556)
                     /gene="proQ"
                     /locus_tag="PXD18_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone ProQ"
                     /protein_id="HDL6300877.1"
                     /translation="MSEQIEQKVEQTQNKTNPSTKEVIAYLAEKFPLCFTLEGEVKPL
                     KVGLFQELAEALKDDEKISKTLLRQVLRNYTNSWRYLAASQANVARVGLQGEEVGVVT
                     EDEATHAAEALAAAKAVVAERKAQERKAQRKEYFKQKAREENAKKRAEFKAKKAIDNL
                     PKASEEKLAALADKFGRK"
     gene            15884..16096
                     /locus_tag="PXD18_000413"
     CDS             15884..16096
                     /locus_tag="PXD18_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HDL6300878.1"
                     /translation="MSAITGTVKWFNATKGFGFITPDQGGKDVFVHFSAIEANGGYRT
                     LEDGAKVQFEIQDSERGASAVNVKTI"
     gene            complement(16156..17310)
                     /locus_tag="PXD18_000414"
     CDS             complement(16156..17310)
                     /locus_tag="PXD18_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate MFS transporter"
                     /protein_id="HDL6300879.1"
                     /translation="MMKVSPFQWAAFNYFGFFCAYGVLLPFLPVWLKHHGYSTEMIGL
                     FAAVGYLFRFAGSMLASQRVKTVSQLIPTARSLTWLNIAAAAALLFSGDFIWLLFPVL
                     MLFQMFNSGAMPIADSIASIWQHQIGLDYGRARLFGSMAFVVGSLSAGYLIGLLGENS
                     VVWIIIGFLVFLGIGQLATPKVGFEEQGNKANTSSVTYRQLLKEPETLKMLIAVSLIS
                     ASHAAYYTYSTIHWSNASISTAMTSLFWGLAVVAEILFFLVSKRLFKSWKISHLMILA
                     AVFAVIRWAIMGSTTEIVLIIVMQMLHSITFGAAHIAMIRYISMQSAERVTKLQGLYF
                     GLASCAFMAVFTFIAGMVYQHSPSLTFWLMAIFTLPAIFIVPKRFEVQIN"
     gene            complement(17307..18125)
                     /locus_tag="PXD18_000415"
     CDS             complement(17307..18125)
                     /locus_tag="PXD18_000415"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HDL6300880.1"
                     /translation="MNEKKLAFIGTGNMAYAIIQGLLKSGYSAEQIIACNKSNLARRE
                     ELQAVGIATNFANREAVEQADVIVLAVKPQMMAQVCAEFADVDFSNKWVISVAAGISV
                     QRLETLLPSAKNIIRTMPNTPSLISEGMTGLFAKKSVNPTACQFAEQLMSAVGKCYWV
                     ETEEQINHIIAITGSSPAYFFRFMEAMQQSAVQMGFSEQDARTLVQSVALGAAKLVEA
                     NPTTPLSTLRENVTSKGGTTAKALEVFEQHDLAKTVDDAMWAAIHRAREMEQSL"
     gene            18202..19110
                     /gene="rdgC"
                     /locus_tag="PXD18_000416"
     CDS             18202..19110
                     /gene="rdgC"
                     /locus_tag="PXD18_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HDL6300881.1"
                     /translation="MVWFKNVMIYKLTGELALESNSLNELQQETRFTPCSQHDMSKFG
                     WATPLTGSDLLHFSQANQFLLISHKEDKLLPANVVKAETEQRIAELEEKEARKLKKTE
                     KQAVKDQVVSALLPRAFSKHQFTALWLDLDNQLVYVDAASSKRAEDTLALLRKTLGSL
                     PVVPISFTLPPAEVMTNWIAKGHTPSWLNLLEEAELKSFDTDSIIRCKRQDLETEEIA
                     RHLQAGKFITKLAIEWEGHFNCVLNEDATLSRLKFADEVREKNDDILKEDVAQRFDAD
                     FLLMTEELKLFTEKMIAEFGGIKSRI"
     gene            19131..19736
                     /locus_tag="PXD18_000417"
     CDS             19131..19736
                     /locus_tag="PXD18_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase family hydrolase"
                     /protein_id="HDL6300882.1"
                     /translation="MLDQTIIDQYDALIFDMDGTLIDTMPSHAKAWEKVGEVLGYPIN
                     PKPMYELSGSTTFVIAREIMQRSNIPEHYFEQVVQLKREFGIEMVLANATLLPAFEII
                     KANVGKKPMAIGTGSHRAMVELLDQKFNLRQYVSVIVDSDDVSNHKPAPETFLKCAEK
                     LGIAPHRCLVFEDADLGVQAALNGNMNVFDVRTNTITHSTR"
     gene            19752..20543
                     /locus_tag="PXD18_000418"
     CDS             19752..20543
                     /locus_tag="PXD18_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF998 domain-containing protein"
                     /protein_id="HDL6300883.1"
                     /translation="MKTEWIKHLIQQLTTLSKAIENYFTSGSFGVKFYPFLMHPCFRK
                     SCAFLIFIIAMVSSFSGLFYLVAEHITILFSERSLTTYFHHSTLELMIPVGTMIDEKI
                     SELSPLSVVMRSMFVLQAVVFFFIYAIGITHIAHNKLRVIGLLLSLCFAIGCSLVAGI
                     QPSSRGEFGIYNLGASITFLIGNLTLIIAGFDLYHPSMQFFKRFSIGAGVIGAICILI
                     TIFLPTLFSPLIERAGIYTIMLWEILAGFAIIKRLLKLPSFRQQG"
     gene            20547..21689
                     /gene="argE"
                     /locus_tag="PXD18_000419"
     CDS             20547..21689
                     /gene="argE"
                     /locus_tag="PXD18_000419"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HDL6300884.1"
                     /translation="MKQIPFIQRYAQLIELPTISSLVAEEDLSNRRLIELLATWLADF
                     GFKTEILAVEGSRNKYNLLATYGEGEGGLLLAGHTDTVPFDEGKWRFNPFQLTEKAGK
                     LYGLGTADMKGFFAFVVEVVSQLDLTQIKKPIRILATADEETTMLGARTFAQHSHIRP
                     DCAIIGEPTSLKPIRAHKGHIGESVRITGRSGHSSDPAKGINAIELMHQSIGYLMKMR
                     DELREKYHNPLFQVTHPTMNFGNIHGGDAINRICACCELQFDMRPLPNMAVQDLYAMV
                     NEHLKPMLEQYGDLIEIRHLHDGIPGYECEHSAQIVQVVEKLLGEKCDAVNYCTEAPF
                     IQQLCPTLVLGPGSIEQAHQPDEFLEMKYIEPTKELLTKLIYHFCG"
     gene            complement(21836..22123)
                     /locus_tag="PXD18_000420"
     CDS             complement(21836..22123)
                     /locus_tag="PXD18_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6300885.1"
                     /translation="MPKSWELSLTARSNVIEILQSVEDYTGHWLSAVSLWEQLQNKLD
                     LIAFMPTIGRRREDGTLETFCRNYRIVYEIHLEKVYIITIIHSRRLYPRPS"
     gene            complement(22116..22307)
                     /locus_tag="PXD18_000421"
     CDS             complement(22116..22307)
                     /locus_tag="PXD18_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300886.1"
                     /translation="MLFKEQGYDEFLAEQIKAGQEAIARGETFTKEQINNELNHLFAD
                     MQKRQQLRENENLFEVNYA"
     gene            complement(22597..23187)
                     /gene="yraP"
                     /locus_tag="PXD18_000422"
     CDS             complement(22597..23187)
                     /gene="yraP"
                     /locus_tag="PXD18_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divisome-associated lipoprotein YraP"
                     /protein_id="HDL6300887.1"
                     /translation="MNKLANKLLKGSLLVLGFISLQGCITTAVVTSAAVATKVATDPR
                     TTGTQVDDEILEEKVAYNINKDEQIKQEARINVVAYNGKVLLIGQAPSMDVVENAKNL
                     AAGAEGVTEIYNEIRQGEKIGFGQITQDSWITTQVKSKLLVNSEVKATEVKVVTENGE
                     VFLMGKVSQNQADAAAEAARNVGGVTKVVKVFSYAQ"
     gene            complement(23197..23781)
                     /locus_tag="PXD18_000423"
     CDS             complement(23197..23781)
                     /locus_tag="PXD18_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HDL6300888.1"
                     /translation="MLNKIQDRFTESIQTQISASELLPAKLSEAANRIVACLLRGDKV
                     IVCGHGRSYGNAELLVSHLLHRYELARPSFAAVQLQLSGVLAGVVAQDNELEAVYKKQ
                     LQAVAKEGDLFIVFSPVGNEECILQAIHTAKNQHLDLDIIALTGSNNDHTLGLLDESD
                     IEISAPSTNQLRVIESHHFYVNLLCELIDHLLFS"
     gene            complement(23787..24158)
                     /locus_tag="PXD18_000424"
     CDS             complement(23787..24158)
                     /locus_tag="PXD18_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HDL6300889.1"
                     /translation="MELFNKLINKREQGSFYEQKARVFLEQQGLRFVAANQAFKGGEL
                     DPIMQDGQTVVFVEVRQRKSNRFGSAVESIDYRKQQKWQNAANMWLLKQNQSLETANC
                     RFDVVAFEGNQTPVWIPNFLG"
     gene            complement(24133..25854)
                     /locus_tag="PXD18_000425"
     CDS             complement(24133..25854)
                     /locus_tag="PXD18_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HDL6300890.1"
                     /translation="MATILNHTMKKALVPTAIALFISACTSVNPVTESIKNEAYSSSE
                     FYINKADQTKEAEDKISYQLLAVRKLIDENKEYEAQNTFSEILTAEMNEVQKLEYALV
                     SAQLAALQGKNEQATSQLKAIQDPLLSSAQRLRYIQTQARIAANQKDVIGIVRARSQL
                     NNFYKMNRERQENNDIIWQTLRDANRGMLEKTVPEAGEMELAGWLALINIYNQNVTTP
                     AQMPQAINNWKAQYPSHSAVAVMPTELQGVSNFQQTQLNSVALLLPLSGDAKILGDII
                     KRGFNDAKADDSTAVQTFDTDSSDVNSLISQAKQQGANVIVGPLLKSRVDEMLLSPEI
                     QNVNILALNATENVRNIAQVCYYGLSPESEAQSGAEKIYQDGNSVAIVAAPQDDYGNR
                     SAEAFAKRWRQLTNSDADVRYYNQPLDAVAAIQNAGVSKAALYILGNAEQVLEIKQGI
                     DSSTLKDRLAIYTSSRSNSPNNGIDFYTSMEGVKFSEVPLLADQSSSEYKKAENLANS
                     DFSMMRLYAMGADAWSLATKFNEFRHIPGYKISGLTGELKAGQHCNIERSLSWMQYRN
                     GAIQQAY"
     gene            25928..26800
                     /gene="rsmI"
                     /locus_tag="PXD18_000426"
     CDS             25928..26800
                     /gene="rsmI"
                     /locus_tag="PXD18_000426"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HDL6300891.1"
                     /translation="MKNRQNSSGINPNYGILYIVATPIGNLGDITQRALDTLSSVDLV
                     AAEDTRHSGLLLSHYGIKKPFFALHDHNEQQKAVVLVEKLAKGENIALISDAGTPLIS
                     DPGFHLVRHCRQAGVKVVPIPGACAAVTALCASGIASDRFCFEGFLPAKTKSRCDKLT
                     ELENEPRTLIFYESTHRILDTLADMQTVFGEDRYVVMAREITKTWETIYGDQLGNLIE
                     WLNEDSNRIKGEIVLVVEGKPQSSEEAFSSQAIKLLTLLCQELPLKKAAAIVAETFGY
                     KKNALYQYGLEHFE"
     gene            complement(27045..28211)
                     /locus_tag="PXD18_000427"
     CDS             complement(27045..28211)
                     /locus_tag="PXD18_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6300892.1"
                     /translation="MTNLLLAIIYLSFISLGLPDAILGSAWPSMHQQLAVPLSYAGVV
                     SMIMSIGTITSSLMSDKLTYHLGTGKVMVISVALTALALWGFSISDAFWILCLWAIPY
                     GLGAGAVDAALNNYVAVHYASRHMSWLHCMWGVGASIGPHILGYALLQGRGWEAGYFT
                     ISMLQIGLTLMLFCSLPFWKLRKQITAEINHSAKPMSLKETLKIPGVKYGILAFFGYC
                     GVEQTAGLWASSYFVMVKDVGLEQAAAFGSIFFIGITVGRGVSGFLTLKFSNRQMIKL
                     GSALILVGIAILCLPLGKYVTLASLIIIGLGCAPIFPCLIHSTPAFFGEDKSQSVIGV
                     QMASAYIGVLLLPPIFGFIANAISIQLLPLYLLLMFAIMAYAYRNLVRETSPSP"
     gene            complement(28363..29877)
                     /gene="putP"
                     /locus_tag="PXD18_000428"
     CDS             complement(28363..29877)
                     /gene="putP"
                     /locus_tag="PXD18_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HDL6300893.1"
                     /translation="MFGLDPTTIMFVVYILGMIAIGFIAYRVTNNLSDYILGGRRLGS
                     FVTALSAGASDMSGWLLMGLPGAVYAGGLIEGWIAIGLTIGAYLNWKLVAGRLRSHTE
                     HSGDALTLPEYFHNRFGDKTRLIKILSAVIFLLFFAIYCASGVVAGARVFENLFGLPY
                     HQAIWYGAVATILYTFIGGFLAVSWTDTIQASLMVFALILTPFFVMYNLGGFDEMQAL
                     IDRAGEMAQKDYNDIFTGTSVLGIISLMAWGLGYFGQPHIVVRFMAAESVKSLENARR
                     ISMTWMIICLLGAIGIGYFGMAYFFGNPEQVGNISKNPEQIFIELAKLLFNPWVAGIL
                     LSAILAAVMSTLSAQLLICSSAITEDLYKGILRPQASDKELVWLSRLMVLAVAALAIY
                     IAQDPDSKVFGLVRNAWAGFGSAFGPVVLLSLFWKRMNGFGAIAGMLTGALIVHFWGD
                     ITLKLALPEIYSMIPGFIAATLMIIVVSLITPMPSKAVLDTFDRANKAYLAEVK"
     gene            complement(29971..30759)
                     /locus_tag="PXD18_000429"
     CDS             complement(29971..30759)
                     /locus_tag="PXD18_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HDL6300894.1"
                     /translation="MNAKKEKESSGNQSLIRGLTLLELLAKFPNGCPLAHLAELSGLN
                     KSTVHRLLQGLQQEGYVRPAPTAGSYRLTTKCLAIGQRALSSINILHIAAPHLEALNL
                     TLGETVNFAMRENDHAILINKLEATTGMMRTRAYIGQQMQLYCSGMGKLFLAYGSADY
                     IPQYWQTKSDIIQKLTVNTITTIDGMQTELETIRRQGFAMDNEENELGVSCIACPIFD
                     HQQKVHYAISVSLSTARLNQLGRENLLPAIQETAEKISAELGGR"
     gene            complement(30756..31334)
                     /locus_tag="PXD18_000430"
     CDS             complement(30756..31334)
                     /locus_tag="PXD18_000430"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HDL6300895.1"
                     /translation="MNQSSLTDLRSQLRQSMRLKRQSLTAGQQTQAAESIIPQALSLI
                     ESYQASHIAFYLPFNGEISPIPLMEQLLQQGKKLYLPLLHPFTSGQLLFVNYNCKTIL
                     KFNRLGIQEPILDVRNILPLQELEMIFTPLVACDKAGNRLGMGGGFYDRTLAQAPHLI
                     SVGLAHECQQVEQLPIESWDMPLDHIILGAAK"
     gene            complement(31336..31527)
                     /gene="ssrS"
                     /locus_tag="PXD18_000431"
     ncRNA           complement(31336..31527)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="PXD18_000431"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(31632..31922)
                     /locus_tag="PXD18_000432"
     CDS             complement(31632..31922)
                     /locus_tag="PXD18_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HDL6300896.1"
                     /translation="MSANNIELQIFGQVLRLQCPVEQQEHLLASAQRLEERVVVLKEQ
                     SGIIQLEKVLAIVALNLNYELEQAQRQNAENKNVLVACIEQLDNSLGKFQSN"
     gene            32001..32558
                     /locus_tag="PXD18_000433"
     CDS             32001..32558
                     /locus_tag="PXD18_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein"
                     /protein_id="HDL6300897.1"
                     /translation="MAITDSQQFKQLVSQLQIDDTPAEFHGFLCGLIAGGIQDESWKT
                     LTYQFTNDGHAFSIEPLNTLTDFYQQLSESFSEANTLFSLWLPQNEEDGFALADGISE
                     WTNSFLLGLGVAQPKLQQETDEVGEAIDDLDEIAKLGYSDDDNNEELLEAGEEVLEYL
                     RVLALFLHSHFALGVPKTEEKPPLH"
     gene            32656..33720
                     /gene="hemE"
                     /locus_tag="PXD18_000434"
     CDS             32656..33720
                     /gene="hemE"
                     /locus_tag="PXD18_000434"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HDL6300898.1"
                     /translation="MSELKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAG
                     DFMSLCRNADLACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLSFGAGEGPKFARP
                     VASLNDVNQLPIPDPEDELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGS
                     SKAFTKIKKMLYAEPHILHKLLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHED
                     YKAFSLHYMHKIVDGLIRENEGRKVPVTLFTKGGGLWLEAIAETGCDAVGLDWTVDIA
                     DARRRIGDKVALQGNMDPSVLYASPERIEQEVKNILAGFGNGSGHVFNLGHGIHLDVP
                     VESPKVFVDAIHNYSKQYHK"
     gene            33867..34457
                     /locus_tag="PXD18_000435"
     CDS             33867..34457
                     /locus_tag="PXD18_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF416 family protein"
                     /protein_id="HDL6300899.1"
                     /translation="MRNPIHKRMERFEPWQNTTFMACLCERMYPNYQLFCEVTEQPEK
                     AKVFQNILNLVWEYLTIKGAKINFDNQLEKLEEIIPDVNEYAFFGVLPAQEACEALSE
                     LLHSIIAGSTLEQAIRISQISLGTVASYLEMQQDKELNEQELKNSEEIQEELDVQWQI
                     YRLLNECEKRDLDLIFELKDEIRSSGISNIGLNINQ"
     gene            34593..34865
                     /locus_tag="PXD18_000436"
     CDS             34593..34865
                     /locus_tag="PXD18_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005819506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDL6300900.1"
                     /translation="MNKTELIDAIAAGANLTKKDAKAALEATLDAISASLKAGDAVQL
                     IGFGTFKVNERKARTGRNPKTGEEIKIAAAKVPAFVSGKALKDLVK"
BASE COUNT        10411 a         7599 c         6752 g        10115 t
ORIGIN      
        1 taaatggaag aacaaaccat tcatatttca atatcagatg cagcacaagc ccattttgcc
       61 agactattag aacagcaaga agagggaact aatatccgta tttttgtggt caatcccggc
      121 acaccggggg cagaatgcgg tgtctcttac tgcccaccca atgcagttga agagacggat
      181 accgaattta aatttaaccg tttctctgca tttgtcgatg atattagctt accgttttta
      241 gacgaagcgg aaattgatta tgtaaccgac ccaatgggtt cacaacttac cctcaaagcc
      301 cctaacgcca aaatgcgtaa agtggctgat gatgcaccgt ttatcgagcg tttagattat
      361 gtgattcaaa cccaagtcaa tccacaactt gccagccacg gcggtaaagt gaccttaatt
      421 gaaatcaccg aagataaata tgccgtgcta caattcggcg gtggttgtaa cggttgctca
      481 atggtggatg tgaccttaaa agagggaatt gagaaacagc ttctggcaat gttccctgat
      541 gaattagttg gtgtgaaaga tattaccgaa caccaacacg gtgaacattc ttactattaa
      601 aaatactaaa agggataaat cattgattta tccctttctt ataattaatg agcaagcggt
      661 caaatttact cgctttcgct cgcacttcgt gccatcagca aagccgatgt tcaaacgcaa
      721 gcgtttgtac aaaaaaatga gtaaattcga ccgcttgtta agtttgatta agccttacga
      781 ctctcttggt gatctttcgc agctttcaca aaacctgcaa ataatggatg accatcacgc
      841 ggagttgagg taaattccgg atggaattgt gctgctataa accaagggtg atttggcact
      901 tcaataattt ccactaattt acgatctgcc gataaaccgc tcacttttaa gcctgccgct
      961 tcaatttgtg gtaacagctt attgtttact tcgtaacggt ggcgatgacg ttcaacaatc
     1021 gtttccgcac catataactc acgagctttt gagccttcaa ttaaatggca ttgttgtgag
     1081 cctaaacgca ttgtaccacc taaatctgac tcatcgctgc gggtttccac attcccttcc
     1141 gcatcttgcc attcggtaat taagccaatc accggctgtg agcaatcttt atcaaattca
     1201 gaagaatttg cctcggttaa acctgccaca ttacgggcat attcaattag ggcgatctgc
     1261 atacctaaac agatacctaa gtaaggaatc ttgttttcac gggcatattg tgcggttcga
     1321 attttgcctt ccacgccacg atagccaaag ccgcccggca caagaatgcc gtctaagcct
     1381 gccaataact ctgtgccttt ggtttcaata tcttgtgaat caatgtattt aatattcact
     1441 gttaaacgat gcgttaaacc tgcgtgtttc aaagcctcat tcaccgattt atacgcatca
     1501 ggtaattcca catattttcc gaccataccg atagtcactt cgccggttgg gtttgcttgg
     1561 cagtatagca cttgttccca ctctgaaaga tcggcttctt tgcaatctaa acggaaacga
     1621 tcgcacacaa aggaatctaa cccttgcgat ttcaataatt ccggaatgcg ataaatcgaa
     1681 tctacatctt taagcgaaat aaccgcacgc tccggcacat tacagaaaag ggcgattttt
     1741 ttcttctcat tttccggaat agcacgatct gaacggcaaa ttaacacatc cggctgaata
     1801 ccgattgaaa gcaactcttt tactgaatgc tgagtcggct tagttttcac ttcccctgcg
     1861 gttggaatat aaggcactaa ggttaaatgc ataaacaagg ttttttcacg accgatatcc
     1921 accgctaatt ggcggagtgc ttctaagaat ggcagtgatt caatatcccc caccgtgcca
     1981 cctacttcta caatggcgac atcacgccct ttaccgcctt ctaacacacg ggctttaatc
     2041 tcgttggtaa tatgcggaat aacctgaatg gttgcaccta aatagtcgcc acggcgttct
     2101 ttacgcaaca cttcagagta aattttaccg ctggtaaagt tgttggcttt gctcattttt
     2161 gaacggataa aacgctcgta gtgacctaaa tccaaatcgg tttccgcacc gtcttcggtc
     2221 acaaatacct ccccgtgctg agttggactc attgtacccg gatcgacatt gatataagga
     2281 tcaagcttca taatggttac atttaaacca cgagcttcca gaatagatgc taaagaggct
     2341 gccgcaatac ccttccctaa agaagataca acaccgcctg tgacgaaaat ataattcgtt
     2401 gtcattgtga ttgcctttgc tgattgatta ggttggaaat tcagaatatc agtttacttc
     2461 gtaaaaaaga aactatcagg acgggaaagt agtttacatc aaattacatt tttttgctaa
     2521 tggaaaatcg gcaagcagtc agattaattc ttttttcaat aatgccgact aatcttaatt
     2581 aatacactat tatttgcgat agatcagaat taacctacat gtttatagat atcataatac
     2641 ctgtttttct aatactggag acgatacaat gaaaatcaaa aaattactac tgccaactct
     2701 gttaagcatt gctactatgc caattcaagc agccgaccta cctaatatta caattcttgc
     2761 aactggaggg acaattgccg gtagccaaaa aaatacggca acctcagctt atcaagctgg
     2821 gcagctaaat attgaaacac tcatagaagc cgtcccggat attaaaaaat tagcaaatat
     2881 caaaggagaa caaatcgtta aaatcggatc tcaggatatg tctgatgaag tatggctaaa
     2941 actggcaaaa gcaattaatc aacaatgccc aaacacagat ggcttcgtta ttacgcacgg
     3001 cacagacact atggaggaaa ccgtatactt ccttgatatg actgtaaaat gcgaaaaacc
     3061 cgtagtatta gtgggggcca tgcgaccagc aactgaaaaa agtgccgacg gcgtattaaa
     3121 tttatataac tcagttgttg tcgccaaaga ttctaaatct agtggcagag gggtgttggt
     3181 tgcaatgaat gatattgtat tgggcgctcg cgatgttaca aaaaccagta ctacatcagt
     3241 gcaaacattt aactcaccaa actttggcgc actaggctat atccataata gcaaagttga
     3301 ttatgagcgc tctcctgaaa gtaaacacac cgtaaacacc cctttcaaag tagatgaatt
     3361 aacggaattg ccaaaagtcg gcattattta tgcttattca aatatgccaa ccgaaccgct
     3421 tcaagcatta ttagatgcga gttatcaagg catcgtggtt gcaggagttg gcaatggcaa
     3481 tatgaatgcg gctaatttgg ctttacttga agaagcagct aaaaaaggaa ttaccgtggt
     3541 tcgctcgtct cgagtgccaa ccggatatac tacccgagat gcagaaattg atgatagcaa
     3601 gtatggtttt attgcttccg gcacattaaa tcctcaaaaa gctcgagtat tactgcagct
     3661 cgccttaaca caaacaaatg atataaaaac tattcaacaa tattttgaag atttctaaaa
     3721 agtaaataac aagcggtcta ttttgcaaaa caaatcacaa aatagaccgc ttgtctcatt
     3781 actaatcttt attattttac aaagctatca aaagttagct cataattgtc gccatcacga
     3841 ctataggcga tatagcgagg gaatttttca ccttcaaatt ttttcaccgt aatgtctttt
     3901 ttatcactgg ttctaaactt gtaggtaatt tcttggtagg ttttgccgcc tacttttacc
     3961 tctttttggg ctttgcgtag ctgcacattc ggtgttgggt aaagtttttt accgttagta
     4021 gtttgaaaac tgctcggtaa tttatcgtaa tagctcaact gaaaggctgt ggtgaacaaa
     4081 tcataagttg gcatagtcag cgcttcttct tttagtggct ctttcacttt gccatatttt
     4141 accgttttag aatcaatttc tgccatcgca taagttttgc cgttacgggt atctcggtag
     4201 ctcaacatat gaaattgttc gtttttttct gttcccttcg cagaaaagac aatattatat
     4261 aaaggcacat taatttttgc ctgaatatta tattggccac caccgttatt aaagttaatg
     4321 taggctggca ttaaataatt tgagctgtat ttcaacttaa aattctccgc actggcgttt
     4381 gaaatcaagc ccaaagtgac cacgattacg ctcgctaact tctgccaaat tctcatctat
     4441 ttctcctcta aagatatact ttcgaacaac cttgaaattg cattgttatc tcgtaattgt
     4501 tccgctttct ccacttgtac ccgtgttaaa tgtggcgaaa aataattaat aaaatcatac
     4561 atatagttac gaagaaaagt tcctcgttta aaggcgattt gcgtcatact cggttgaaac
     4621 aggtgacttg cattgatagc gactaagtct ttatccgttt ccgtatgtgc cattgatgcc
     4681 ataataccaa cccctaagcc taagcgtaca taagttttga ttacatcagc atctgtcgcc
     4741 gtaaatacga tattaggcaa aataccttcc ttattgaagg catgatctaa atccgattgc
     4801 cctgtaaaac caaaagtata ggttatcaaa tcatatctac ctaattgttc gacagtcaaa
     4861 tttttacttt ggttcacaaa agccgcaaga ggatgctctg gtttgacaat aactgaacga
     4921 ttccaccaat aacacggcaa taaaaccgct tcatcaaata aatattgagc ttctgtggta
     4981 atggctaaat ccacttctcc agccaccaaa gcatcataaa tttgattcgg ggagccttgg
     5041 tgcaaatgca aacttacttc aggatagcga gccttaaact tctcaattac actcggtagc
     5101 atataacggg cttgggtatt ggtggtcgca atgcgtaaga tgcctttgtt gggtcgagtt
     5161 tgttcttcag caaccgattt aatgctctgg gcttttacca ataattcacg agcaatcgcc
     5221 acaatttttt caccagcagg cgttagcccc ttaacgtgct taccgttacg ctcaaaaata
     5281 ttaattccca actcactttc caacaaacga acttgtttgc taatccccgg ttgagaagtg
     5341 taaagcacct ctgcggcctc ggtaatattc aagttctggt ttactatttc aacgatataa
     5401 cgtaactgtt gtagcttcat aatgatttcc cctctacaat cgcaataatc tgttgcatcg
     5461 tatgcacttc gtaagttggc ttaatatccg tatcattctc tttactaagc aaatttaacc
     5521 aacaagtatc aattccagca ttattacctc ctaaaatatc agaagcgagg gtatcgccta
     5581 ccataagcac tttagtacga tcaaattcgt ccattaatgc aaaagcgtaa tcaaacactt
     5641 ggcgatcagg ctttgcggca ccaatttgtt ctgatatcac tacaatatca aaaaaatgtg
     5701 aagtttgagt attatctaaa cgtttttgct gcaaatcggt aaaaccattg gtgataatgc
     5761 ccatttttac tttaccatat aaagcattta acatatccat tacaccttct aaaggctgac
     5821 tgacgaatgc catctccgcc attaactctt gattaagttg tagcggatct acgcctgttt
     5881 gagcagataa ttttacaaaa cgtctggttt gaatatcttg agcagtgatc tcattatttt
     5941 ggtaagccac ccaaagtggt ttatttaccg cttgaaagtc ttgataatct tgttcactaa
     6001 aatcaatttg gtaacgagcc agcatcgctt ttaaaccaag ataagaatta aatgaaaaca
     6061 aggtttcatc agcatcaaat aatacccatt gatatttcat aatattcctt ttttaactta
     6121 gataacaagc ggtcaaattt ttctaatttt tcgcataccg ctgataaagc cacgcttaag
     6181 cacaacactc tttcattttt tgctgaatcc actcaacaaa aaattgtact ttctgaactt
     6241 gggctgattg cgaaggatag acaacataga acgatttttc atcaaacaat gtggttggga
     6301 aaggctctat taaagtacct ttttcaattt cgtgctgtgc caacaactgg ttggcaatcg
     6361 caatgccttg ttggtgcatt gcagcttgaa gcaccataaa agtatggcta aaaattgagc
     6421 cagtttccgc atctactata tcttctatat gcaaatgttc aaccattctt ttccacttat
     6481 tatgggtgga ggaatgtaat aaatgcttac ctgctaaatc cgccggtaaa tgaatggtat
     6541 tttgcgataa atactcaggc gaagctaaaa taacaatacg ggattccgtc aaacggatag
     6601 attccagacc ttgccaatcc cccttaccat aataaatagc aacatctgtt tctttaccta
     6661 ataatccctc atcttgatca acacccttaa tacgtacttc cacttctgga tatttttcgt
     6721 ggaaatccgc caaacgtggg actaaccaat gcataccaaa tgtttgtggt acgctaatag
     6781 tcagaatttg acgactactt tgctgcctaa ttttatctgt tgcgagagca atttgttcta
     6841 ataatggctg aacttcatag aaatattgtg cgcctaactc agttaattcc agcaaacggt
     6901 tacggcgatg gaacagggaa gcacctaaaa aatcttctaa tagtttaatt tggtggctca
     6961 ctgcagcttg tgtgacgaag agatcttctg ccgctttagt aaaatttaaa tggcgtgcag
     7021 cagattcaaa tgctttcaat gcattgagtg gtggaagttt tttgttcata atttttcaat
     7081 ctaatagatt actaaacaag caactctatt attttttctg atagtttaaa taaaaaaaat
     7141 tcgtttgatg cttgcaaata gaaataataa aatatccgca tacttagatg gatagtttag
     7201 aatttatttc tattcctaaa ttttaagtat gatgttgtgt ttgcatattg gtctaggaaa
     7261 ctagactaga gtaacgaaag ttacttgttt cacttcctgt atattttgaa ccgtattggt
     7321 ttataaccgc ccactttggg cggttttttt ctatgtaaaa aaacagcaca aaacctagat
     7381 cgcattctat attattcgct acctttattc tagcctttct gcttttttat tctttcactt
     7441 taatctatta taaaaagagg ttttatagta tgctaaagcc tatttttcat ttgcaataat
     7501 taccgagagt tcttttgagt aaaccgaaat taacccataa ccaacagcgt agaatccaat
     7561 ctaaccatca taagcgtatc aacaaaaaag agattgaatg gcaagatgaa atgttaggag
     7621 aaatgcaaca gggcatcgtc gttactcgcc acgttaaaca cgctgatgtt gaaaccgcag
     7681 aggggcaaat tttccgctgt aatatccgcc gtacattgaa aaatgtagtg gtgggcgatc
     7741 aggtttcttg gcgtaaaggt agtgagcaac tacaagggat tagtggggtc attgaagccg
     7801 tcttcccacg taaaaatgaa cttacccgcc ccgattatta tgacggtatt aaggtgatgg
     7861 catcgaacat cgatcaaatc attattgtat cagctgtgct acctacactt tcgctgaata
     7921 ttatcgaccg ttatttagtg atttgcgaaa cggcgaatat tcctgcctta atcgtgctaa
     7981 acaaaattga tttattaaac gaaagcgaac ggcaagcagt taaagagcag ctcaaaatct
     8041 atgaagagat tggctatgaa accctatgtt tatcggctga tacgggtgaa aatatgcagg
     8101 cgttacacca atatcttgct aaaggtacgt ctatttttgt cggacaatcc ggcgtgggga
     8161 aatccagcct aattaaccaa ctgttacctg aagtcaatgc tctcactggc tcagtgagcg
     8221 ataactcagg gttaggtcag cacaccacca ctgcctctcg cttataccat ttaccgcaag
     8281 gcggacagct gattgactcg ccgggcattc gagaatttgg cttatggcat ttagaacctg
     8341 agcaaatcac cttaggctat cgagaatttc aatcggtttt aggcacgtgc aaattccgtg
     8401 attgcaaaca caaaaccgac ccgggttgtg ccttaagaca agaggtcgaa aatggcgaaa
     8461 tttctgcaat tcggtttgaa aattaccatc gcttaattga aagcctgtct gaaaccaaaa
     8521 gccaacgcca tttcagaaaa gaagaagtat aatgaatgaa tttatttacc ctaacgcccg
     8581 attaatcgcc ggtgttgacg aagtcggacg aggaccttta gtcggagcgg ttgtgaccgc
     8641 agccgtgatt ttagatccga ataacccgat tcagggctta accgattcca aaaaattatc
     8701 cgagaaaaaa cgccaagctt tggcagaaga gattaaagcc aaggctctga gctggtcgct
     8761 aggacgtgcc gagccgacag aaattgatga gctgaatatt ttaaatgcga caatgttggc
     8821 aatgcaacgt gcggttgccg gcttgcatat tcagccggat tttgtgctaa ttgacggcaa
     8881 tcgtccgcca aaactgccaa tgccggcaca agcggtggtg aaaggagaca gcttagtggc
     8941 tgaaatcagt gctgcttcga ttattgccaa agtcgcccga gatcaagaaa tggacgaatt
     9001 agaccaacaa tttccgcaat acggcttcgc acagcacaaa ggctacccga ctaaactcca
     9061 ttttgaaaaa ttagcagaat ttggggcaac accttatcat cgtaagagtt ttgcccctgt
     9121 aagaaaagta ttaggtttaa tcgattagaa ggaaaacaca atgactacag agtaccaaaa
     9181 aacgattttc accaaaatca tcaataaaga aattccggca aatattgtct atcaagatga
     9241 acttgtgacc gcatttcgtg atattgctcc acaagcaccc acgcatattt tgattattcc
     9301 gaataaattt attccaaccg tcaatcacgt gagtaatgaa gatgaattag ccctagggcg
     9361 tttatttacg gtggcggcaa aattagccca agaagaaggc attgccgaag aaggctatcg
     9421 cttagtgatg aattgtaata aaaacggcgg gcaggaagtg ttccatattc atatgcactt
     9481 gttaggcgga caaaaactag gacctttagt ggcaaaataa ctatgcgtat ttcctacttt
     9541 gcatttgcaa ttttttcgat ttttttgacc gcttgtggta gcaaacctgt cagctattta
     9601 ccaaccggct cagagcctat tgtcaatatt gagtctgaca ttgctgaaaa gatagagctg
     9661 gaaacgaata gcaagcaatt tagcaccaca aatttaactg aatttccgct taatcttact
     9721 tataaattat tttggtataa taaagatggg gtaacacaat cccataacgg tatatcagat
     9781 agtatcggct ggcaacatct atggttgcaa cctaagcaaa aacagaccat tgcactcatt
     9841 aaaccgacgg aagaaagcca taattaccgc ctctatttac gaggcgtaaa atagcaaaaa
     9901 agcagagcca actgctctgc ttctttattt atttcaaaaa cgggttggtc tgtttttccc
     9961 gcccgatagt tgtgtgtgga ccatgtcccg gtatgatgat gaaatcatca tctaaatcaa
    10021 acattttttc cctgatcgtt tccaataact ggctatggtt gcctaaatag agatctgttc
    10081 gacctatgct attttggaat aaaacatcgc cactaaaagc aatacgattg tcaaaatcaa
    10141 aaaaaccgat atgacccgga gcatgacccg gcaaatgtcg aacggtatag ctcagctcgc
    10201 cgacttcgac ccgatcacct tcctccaacc aatgatccgg caaaaagcca tttactggtg
    10261 gtaatccaaa ttgttggcac atttccggca aacgttcaaa taaaggttta tctgcaagat
    10321 gcgagccgaa aacctctact tgaaaatgct ctctcaactt ttccaccgcc ataatatgat
    10381 ctaaatgacc gtgcgtaatc aataatttct gaaccttaag ctgctgagat tcaacaaatt
    10441 gaataatgcc ttcggcatta tcgccgccat caataatagc cgcattctta ttttcgtccc
    10501 aaatcaccgt gcaattttgt tgaaatggac taacaggaat aatttgcaaa ttaaacataa
    10561 aataagaccg cttgttagcc tctccaagtg cgaactgggc cagtatctac gtgaacaaag
    10621 ttactacgag gataataacc tacgccacca ttattcaagc tctcagccgc ttgttttact
    10681 ttatataacg gcacacctga tacttggaaa tctactgctt gcccaagaat atggtaacta
    10741 tggctggcaa caccacggct tctacgacga agtcttgcat ttgtttgtgc ggagcgatag
    10801 ccacttaata ctaggatttc cgcattatgg aaacctaaac ggcgttgtaa ttgattcaat
    10861 ttgacaaata attttggatc aattgcttta acttgattga tatgacgatc ccgcattaaa
    10921 tagtttaact ggcttaaatc ggttttattt aatccacctg caccaaattt agcagtgtaa
    10981 gtatcgcctg tattcacatt acgaaaacgt aacgcagctg gggcaggagt agaaagcgct
    11041 gccattactt gacccggcag aaggctagcc cctaaaacaa gtccgccgag tgatagccac
    11101 ttacggcgtt gaacattaat ttgtttcatt ttttcctcat aggttagcta atgatttata
    11161 gaaaatcact cacaaatgag cgaatttcta tacaccatac ttaaagtaaa aatttacaat
    11221 cgtaaattta tgtaagctat attttcaaaa agttccaaga agatgatatc ttcttggaat
    11281 ttatcagaaa tagcacgatt aaataatgct ctttaatttt ccccaattca cagaatgttg
    11341 tgggattttg gcatcaaagt tataaatgtc cggaagggtt tgcacttttc caccttcaac
    11401 ccaagccgtc acataataga gataaaccgg gttatctgaa cgaatctgag ccgaggtcgt
    11461 cttcttactg cctaagactt gattcttttt atcagatccc caacccgctt cttttaataa
    11521 aatggttgcc aattcatcag atttttctac acggacacaa ccagaactta acgcacgccc
    11581 cgttttacca aataatcctc tatttggcgt atcatgcaaa taaattgcat ccgaacttgg
    11641 catattaaat ttataacgtc ctaaagcgct atcatcacct gctttctggc gaatacggta
    11701 tggtgaactt ttagcattta aatattgtga ccaatttacg ctacgcggat taattttatt
    11761 gccactacta tcaagaattt cgaaactagc acgatctgca taacctgggt cacgcgctag
    11821 tttaggaata atatctttag tcataatact agtcggtaca ttccaaggtg gattcactac
    11881 cacattgctc agcttactat acattaccgg tgtacggcga tcttctcgcc caacaatcac
    11941 tttagattga agagctaaat taccatcacg gaaataatat aattgatagc ttgggatatt
    12001 cacaaaaatt ccattgttaa aacttggaat aatacgtaaa cgttgagcat tgagcgctaa
    12061 tttatagaaa gaagccccat taccgccacc agctacctcc gtaacagctt tacctttttt
    12121 ggctttaggt gctgaagagc ctcctgccat tgccaatact ctctgtgccg tatcacgata
    12181 taaatggttt cttggaacaa ggtctgttac aaactgccca gaatcgcctt ccctcacggc
    12241 attagtccat tggaagattt gctctgaaga gggcgatttt ggtacataac tgcctaagtt
    12301 atataaccaa ttatttgcat ttttaaacac atttttgttg taatacaaat aatctaagaa
    12361 gccatcagtt aataaaatat ctctacctaa accttccggt tgatttaaga tttgctgcaa
    12421 tgccttagct gatttagagg ataccccact tactgcaaat aatgcatatt ctttcaaaaa
    12481 tgctttttct gcggctttat cattccacat tgtcgcaaat tcactgtcta aataaacctt
    12541 agttgttgct tggctcagca ataaggcatt attacctatt tcttgcttaa ttcttgcttc
    12601 cgcttctgca aattttcttg cttgctcttg acgaatttgt tcctgttcta acgcataatc
    12661 ggcctgtttt accaattctg cagcacgagc ctgctgagct gcaaaactta attgtggtaa
    12721 aatattatct tgtacaacag gctcagaagc cacctgagca actgtggctg tttcagccaa
    12781 agccatgcca gaaaacgcca ccataatagg taataattta aaggttttca cccactcttc
    12841 ctcttaatat ttgcaaattt ataaaaaaat aaaccgctta gcggagctaa gcggtacgtt
    12901 atgtgcgcat tataaacaca tttatgattt tttatcaaat tctgaccaat caagcatcat
    12961 ctgttcagct tcttttaaga aaaagtccgg tgcttcatag tcttttggta aatcatcaat
    13021 atcttttaat gcttttttgc cttcacgggc aaaacgagca ttaatatctt ttaagcgctt
    13081 gctttcatct gctttatttt ctttcaggcg ttcttctaaa tttaacgata aaaacttacg
    13141 ctcatcacgt tcttttcgaa tcgcaatatt ctcgtttaat actataaact ctgggttttt
    13201 agcaatacgc tcttgatgtt tcgctgttaa tgcagcaacc gcgttacgag cattcccagc
    13261 ctctttataa ttagctgctg gaattttatc ccaaggaagc gcattatctt caaaactttc
    13321 acctgttttt gcagcattaa tgatttccgg gaatttaata tccgcctcaa ccccttttag
    13381 ctgggtactt ccaccattga tacggtagaa tttttgaatc gtatattgga taaaaccaag
    13441 aggctcttga tccaaatcat atacaaaatt caatgaacgg ctctgttgaa cagttccctt
    13501 accaaaggtt tgttgcccta caataattgc acggttgtaa tcttgcattg ccgcagcgaa
    13561 gatttcagag gctgaagcac tatggcgatt aatcatcacc atcacttttc catcataaac
    13621 tgattttgat tctggatctt cgtgtacttt gatacgattg aatgcgtctt gtacttgcac
    13681 tacaggccca tctttaataa ataaaccagt taattcaatc acttcagtta acgaaccacc
    13741 accgttttca cgtaaatcaa tgatcaatcc ttcaacattt tttttctcta tttgagtaag
    13801 taatttacgt acatctgaag tcaaaccgat ataaaaagta gggatcttaa ttacccctac
    13861 attttttcca tctacttttt ctaccgttaa tttagcagca ctatcctcaa tacgaacttt
    13921 atcacgcaca agggtaataa ttttagtttt tccacctttt tcaggctcaa tttctaaacg
    13981 aactttagtg ccttttttac ctttgatttt atcgactaca ttatccaaac gccaaccgat
    14041 aacatcttca atctcacctc tctcaccttg acctacaccg acaattttat cgccgactac
    14101 cagcttctta cttttagcgg caggggctcc tggcactaat gctctaatgc tggttacatc
    14161 atcttcttgg gttagcgttg caccaattcc ttctagcgac agattcatgc tctcttggaa
    14221 cgcttttgcc gcacgaggag acaaatagct agtgtgggga tcgatctcac gagagaatga
    14281 atttaagtaa gtttgtaaaa tatcatcagc cttaacttga gttaaacgct taatcgcaaa
    14341 gttataacgt ttagtgagtg ttttcttaat ttcaggccat tttttatctt taagatataa
    14401 attgataata tcgtttttaa ctcgctgctc ccaaagtgta tttgcctctt ctacactttt
    14461 tggaaatgcg gccttctcac ggtcaatctc aatttcatca ttccctttta agtcaggctc
    14521 tttatctagt aaagataagg catagctata acgctcataa cgacgtttag acattaactc
    14581 atacattgca aatgctgcat ctaatttacc agcatataaa tcatcatcta atgttgtagc
    14641 atatttacta cgcatttcat caatatcggc ttgaagaaaa gtattatgag aaggatcaag
    14701 ccaatcgaca tagcggttaa aaatcttccc tgcaaactca tcattcagtt gaaatttatg
    14761 ataatgcgat tgagttaatc gggctgttac acgcttggtt gataagctat gctgctcatt
    14821 aggttttggc atcacaatcg cactttcttt aatgtccggc tgaacggcaa aagcgtttcc
    14881 tatcattaaa cctagggcta gggcaaaaat tttatttaat cttgttaatt tcatcttctt
    14941 ttccaaataa tcaagcggtc atttttttgc aaaattttac taaaatccga ccgcttgtaa
    15001 gcacaaagcg acttgaaaac tatttacgac cgaatttatc tgctaatgca gctaattttt
    15061 cttctgaagc tttaggtaaa ttatctattg cttttttcgc cttaaattct gcacgctttt
    15121 tcgcattttc ttcacgtgct ttctgtttga agtactcttt acgttgtgct ttacgctctt
    15181 gtgctttacg ttctgcaacc accgctttcg cagcagccaa agcttctgcg gcgtgagtag
    15241 cttcgtcttc tgttaccacg ccaacttctt caccctgtaa gccgacacga gcaacattag
    15301 cttggctggc agccaagtaa cgccaagaat tagtgtaatt ccgcaatact tggcgcaata
    15361 acgttttact gattttctca tcatctttta atgcttcagc taattcctga aacaacccaa
    15421 ctttcaatgg ttttacttca ccttcaagcg tgaaacaaag cggaaatttc tccgctaaat
    15481 aagcaatcac ttccttggta cttggattgg ttttattctg agtttgttct actttttgct
    15541 caatttgctc tgacataata agtcctattt aataaaaatc taataattag ataagtgaaa
    15601 atctaactgg atactatatt tgatttataa ggcttcgtcc atataaattc cacattacgt
    15661 ttacaaaaga gatagactct tttttcattt gaatgttcat aaaagtataa aaatgatttg
    15721 cttaaaaaat gaataagtgg tgtaatggct caagctgttc gtgcgttaat taaagttgaa
    15781 tcttgttagt tattttcctc aaggcaagtg attgatagat acgtctgtaa tatcccgttt
    15841 agctatcttt tatcactttt tgtatttata taaggaaaat tttatgtcag caattaccgg
    15901 cacagtaaaa tggttcaacg ccaccaaagg ttttggtttt atcacccctg atcaaggtgg
    15961 caaagatgta ttcgtacact tctctgctat cgaagcaaac ggcggctacc gcacattaga
    16021 agacggtgct aaagtacaat ttgaaatcca agattcagag cgtggagctt cagccgtaaa
    16081 cgtgaaaaca atctaatttc agcaaattca atgaatttcg ataaaaatgc cgacaacttg
    16141 tcggcatttt tgctatcaat taatctgtac ttcaaacctt ttcggcacaa taaaaatggc
    16201 aggtagggta aaaattgcca tcaaccaaaa tgtcaggctt ggggaatgtt gatagaccat
    16261 tccggcaata aaggtaaata ctgccataaa agcacagctt gccaagccaa aatagagacc
    16321 ttgtaatttc gtcacacgct ctgccgattg catcgaaata tagcgaatca tcgcaatatg
    16381 agccgccccg aaggtaatag aatgtagcat ttgcattaca ataatcagca cgatctctgt
    16441 agtactaccc attattgccc aacgaatcac tgcaaaaacg gcagctaaaa tcattaaatg
    16501 gctgattttc cacgatttaa acaagcgttt agagaccaaa aagaacaaaa tttccgccac
    16561 caccgccaag ccccaaaaca ggctagtcat tgcggttgaa atactggcat ttgaccaatg
    16621 aatggtgctg taagtgtaat aagcggcgtg cgaggctgaa attaacgaca ccgcgatcaa
    16681 catttttaag gtttccggct ctttcaataa ttggcgataa gttacgcttg aagtattggc
    16741 tttattacct tgttcttcaa acccgacttt gggcgtagca agctgcccta ttcctaaaaa
    16801 aaccaagaaa ccgatgataa tccacaccac cgaattttca ccaagcaagc cgataagata
    16861 gccggcagaa agtgagccta ccacaaacgc cattgagccg aataaccttg ctctgccgta
    16921 atccagcccg atctgatgtt gccaaattga ggcaatgcta tcggctatcg gcattgcccc
    16981 cgaattgaac atttgaaaca acattaacac cggaaaaagt agccaaatga aatcccctga
    17041 aaacagcaac gccgccgcag ccgcaatatt cagccaagtt aaactgcggg cggtgggaat
    17101 gagttggctc acggttttta cccgttgtga ggcaagcata ctgccggcaa agcggaacaa
    17161 atagccaacg gcggcaaata agccgatcat ttcagtcgaa tagccgtgat gtttaagcca
    17221 cactggcaaa aacggcaaca acacgccata ggcacaaaaa aagccaaagt aattaaatgc
    17281 cgcccattgg aacggggaaa ctttcatcat aacgattgct ccatttctct ggctcgatga
    17341 attgccgccc acattgcatc atcaacggtt ttagcaagat cgtgctgctc aaacacctca
    17401 agggctttcg ccgttgtgcc tccctttgag gtcacatttt cccgcaaggt cgaaagtggc
    17461 gtagtcgggt tcgcttccac caatttcgcc gcccccaatg cgacagattg tacaagcgtt
    17521 cttgcgtcct gctcggaaaa gcccatttgc accgcacttt gctgcattgc ctccataaaa
    17581 cggaagaaat acgccgggct tgagccggtt atcgcaataa tgtggttgat ttgctcctcg
    17641 gtttccaccc agtaacattt accaacggct gacatcaact gttcggcaaa ttggcaagcg
    17701 gtcggattta ccgatttttt tgcaaataat ccggtcattc cttcgctgat taaagacggg
    17761 gtgtttggca tcgtgcgaat gatatttttc gcactcggca acagcgtttc caagcgttgc
    17821 acagaaatac ctgctgctac tgaaatcacc catttgttgg aaaaatcaac atcggcaaac
    17881 tcggcacaca cttgtgccat catctgtggt tttaccgcca gcacgatcac gtcagcctgc
    17941 tctaccgcct cacgatttgc aaaatttgtc gcaattccga ccgcttgtaa ctcctctcgg
    18001 cgagccaaat tacttttatt gcacgcaatg atttgttcgg cagaataacc gctttttaat
    18061 aagccttgaa taatcgcata cgccatattt ccggtgccga taaaggcaag ttttttctcg
    18121 ttcattcgca aattctctac tgtgttgggt tgaggtctgt taaaataaca ctattctaca
    18181 cccgataaag gatatgcaaa aatggtttgg ttcaaaaatg tgatgatcta taaattaacc
    18241 ggcgagctgg cgttggaaag caatagcctt aacgagttac agcaagaaac ccgctttacc
    18301 ccttgcagcc agcacgatat gagcaaattc ggctgggcta cgccacttac cggctcggat
    18361 ttactgcatt tctcacaagc gaaccaattt ttgctgattt cacacaaaga agataaatta
    18421 ttacctgcca atgtggtgaa agccgaaacc gagcaacgca ttgcagaact ggaagaaaaa
    18481 gaggctcgta agctgaaaaa aaccgaaaaa caagccgtga aagatcaggt cgtttctgcg
    18541 ttattgcctc gagcattcag caaacatcaa ttcaccgctc tttggttgga tttagataat
    18601 cagttggttt atgtggatgc agcctcgagc aaacgggcgg aagatacgct ggcgttactg
    18661 cgaaaaacac ttggctcgtt gccggttgtg ccgatttcct ttaccctacc gccggcagag
    18721 gtaatgacga attggatcgc caaagggcat acgccaagtt ggttgaattt gttggaagag
    18781 gcagaactga aatctttcga taccgacagc attattcgct gtaaacgcca agatttagag
    18841 acggaagaaa tcgcccggca cttgcaagcg ggcaaattta tcacaaaact tgcgattgaa
    18901 tgggaagggc atttcaattg cgtgttaaat gaagacgcca cgctttcacg cctgaagttt
    18961 gccgatgaag tgcgagagaa aaatgacgat attctcaaag aagatgtggc tcaacgcttt
    19021 gatgccgatt tcttattaat gaccgaagag ctgaaacttt tcaccgaaaa aatgattgcc
    19081 gaatttggcg gaattaaatc cagaatttag aaaaaaattt aaggaaagca atgttagatc
    19141 aaaccattat cgaccaatat gacgccttga tttttgatat ggacggcaca ttaattgaca
    19201 cgatgccaag ccacgccaag gcgtgggaaa aggtgggcga agtgttaggc tacccaatca
    19261 atccaaagcc aatgtacgaa ctgagtggct caaccacttt tgtgattgcc cgagaaataa
    19321 tgcaacgctc caatatcccc gagcattatt ttgagcaagt ggtacaacta aaacgggaat
    19381 ttgggattga aatggtgtta gccaatgcca ctctgttgcc tgcctttgag attattaaag
    19441 ctaacgttgg caaaaaacca atggcaatcg gcacaggctc acaccgtgca atggtggaat
    19501 tattagacca aaaatttaac ttacgtcaat atgtttcggt tattgtagat tctgatgatg
    19561 taagcaacca taagccagcc cctgaaacct ttttaaaatg tgcggaaaaa cttggcattg
    19621 ccccacaccg ctgtttggtg tttgaagatg ccgatttagg cgtgcaagcc gccctcaacg
    19681 gcaatatgaa cgtgtttgat gtacgtacga atacgataac tcactcaacc cgttaaaaat
    19741 gataggttta tatgaaaaca gaatggatta aacatttaat tcaacaatta accacgcttt
    19801 ccaaagccat cgaaaactac tttaccagcg gttcatttgg ggtgaaattc tacccttttc
    19861 taatgcaccc ttgttttcgt aaaagctgtg cctttttgat ttttattatt gctatggttt
    19921 caagttttag cgggctattt tatttggtgg cggaacacat cacgatttta tttagcgaaa
    19981 gatcgctcac cacttacttc caccatagca cccttgaatt gatgattcca gtcggcacaa
    20041 tgatagatga aaaaatcagc gaattatcac cactttcggt ggtaatgcgt tcaatgtttg
    20101 tgctacaagc agtcgttttt ttctttattt atgcaatcgg catcacccac attgctcaca
    20161 acaaattgcg ggtcatcggc ttattgcttt cgctatgctt tgcgattggc tgctcactag
    20221 ttgccggtat tcagccaagc agtcgtggcg aattcggcat ttacaattta ggggcaagca
    20281 ttacgttttt aatcggcaat ttaacgctga tcatcgcagg cttcgatctc taccaccctt
    20341 caatgcaatt ttttaaacgc tttagcattg gtgcgggcgt tatcggggca atctgtattt
    20401 taatcacgat tttcctacca accctgttta gcccgttaat tgaacgagca ggtatttata
    20461 ccattatgct gtgggaaatt ttagccggtt ttgccatcat taaacgcctg ttgaaattgc
    20521 cctcattcag acaacaagga taaccaatga aacagattcc ctttattcaa cgctatgctc
    20581 aactgattga gctaccgacc atttccagcc ttgttgccga agaagattta tcgaaccgcc
    20641 gtttgattga attgctcgcc acttggctgg cagatttcgg ctttaaaacc gagattttag
    20701 cggtagaagg cagccgtaat aaatacaatt tacttgcgac ctatggcgag ggtgagggcg
    20761 gcttattatt ggcagggcat accgacaccg tgccgtttga tgaaggaaaa tggcgcttca
    20821 atccattcca attaaccgaa aaagcaggca aactctacgg cttaggcacg gcagatatga
    20881 aaggcttttt cgcctttgtg gtggaggttg tgagccaact cgacctaacc caaatcaaaa
    20941 agccgattcg cattcttgcc accgctgatg aagaaaccac aatgctgggg gcaagaacct
    21001 ttgctcagca cagccacatt cgccccgatt gtgcgattat tggcgagccg acctcgctca
    21061 aaccgattcg agcccacaaa gggcatattg gcgaatcggt tcgcattacc ggcagaagcg
    21121 gacactccag cgaccccgcc aaaggcatta atgcgattga attaatgcac caatctatcg
    21181 gttatttaat gaaaatgcgt gatgaactgc gagagaaata ccacaatccg ctgttccaag
    21241 tcacccaccc gacaatgaac ttcggcaata ttcacggcgg cgatgccatt aaccgcattt
    21301 gtgcctgttg cgaattgcaa tttgatatgc gaccactacc gaatatggcg gtgcaagatt
    21361 tgtatgcaat ggtaaacgag catttaaaac cgatgctgga acaatatggc gatttaattg
    21421 aaatccgcca tttacacgat ggaattccgg gctacgaatg cgaacactcg gcacaaatcg
    21481 tgcaagtggt tgaaaagcta ctgggcgaaa aatgcgatgc cgtcaattac tgcaccgaag
    21541 ccccattcat tcaacaactc tgcccaacgc tggtactagg ccccggctcc attgaacaag
    21601 cccaccagcc cgatgagttt ttggaaatga aatatatcga accgacaaaa gagttattga
    21661 ctaaattgat ttatcatttt tgtggataaa tcaacagaaa caagcgctca ttttcgccat
    21721 actttttgca aaagaatcgg caaaaatgac cgcttgatat ttagtattga gtgacctata
    21781 aacttccata cttcatcatt gatttaagga gattctgtta gataggtatt aatctctagc
    21841 taggtcttgg atacaaacgg cgagaatgaa ttatagtaat aatatatact ttttctaggt
    21901 gtatctcata gacaatacga taattgcggc agaatgtttc taatgtgcca tcttctctac
    21961 gtcgccctat tgtaggcata aatgcaatga gatcgagttt attttgtaat tgttcccaaa
    22021 gtgaaactgc gctcaaccaa tgccctgtat aatcttctac cgactgtaaa atctcaatga
    22081 cattagacct tgcggtaagt gacagctccc aagatttagg cataattaac ctcaaacaaa
    22141 ttttcatttt ctcgtaattg ctgacgtttc tgcatatccg caaataaatg atttaattcg
    22201 ttattgattt gttctttggt aaaggtttct cctcgagcta ttgcttcttg accagcttta
    22261 atttgctctg caagaaactc atcatatcct tgttctttga atagcatatt ctgctccttt
    22321 gatttgtgtc ttgattccac tatgttcaag acatagttta agtttaaatc tacgctcaaa
    22381 gcaatgaaga gtcaagggaa tccttatgtt gatagggtgt gcatattttt cgagtcaaat
    22441 gaattaaaaa tcatcattac gatcacccac tcatagattt tatcttccta tctaaggtca
    22501 tcttcttata tcaaacaagc ggtctaaatt tgcaaaaaaa tgacaaattt agaccgcttg
    22561 tgagttacaa aaatataaac taattgagct tatcaattac tgcgcataac taaatacttt
    22621 caccactttg gttactccac ctacattgcg agcggcttcg gcggcggcat cagcttggtt
    22681 ttggctgact ttgcccatta aaaacacttc gccgttttcg gtgacgactt tcacttcggt
    22741 ggcttttacc tcgctattta ctaacagttt ggatttcact tgggtggtaa tccagctgtc
    22801 ttgtgtaatc tgtccaaagc cgattttttc gccttggcgg atttcgttgt aaatttccgt
    22861 cacgccctcc gccccagcag cgaggttttt cgcattttcc actacgtcca tacttggtgc
    22921 ttgcccgatt aataacactt tgccgttgta agccaccacg ttaatgcggg cttcttgttt
    22981 gatttgctcg tctttattaa tgttgtaagc gactttttct tctaaaattt catcatcaac
    23041 ttgcgtgccg gtggtgcgtg ggtctgtcgc cactttagtt gcaaccgccg cagaagtcac
    23101 caccgccgtg gtgatacaac cttgtaaaga gataaaacct aatactaata ggctgccctt
    23161 taatagttta tttgctaatt tgttcataat ctctccttac gaaaatagta aatggtcgat
    23221 aagttcacat aataaattca cataaaaatg atggctttca atcaccctca gttgattggt
    23281 tgaaggggct gaaatttcaa tatcactttc atctaataag ccgagtgtgt ggtcgttatt
    23341 actgcctgtt aaagcaataa tatctaaatc taaatgttga tttttcgccg tatgaatagc
    23401 ttgcaatata cattcttcat tacccacagg cgaaaaaaca atgaagagat caccctcttt
    23461 tgcaaccgcc tgcaactgtt ttttataaac agcctctaac tcgttatctt gtgccacaac
    23521 tcctgccaat acaccgctta attgcagttg tacggcagca aaactcggtc ttgccagttc
    23581 ataacggtga agtaagtggc tgaccaataa ttcggcatta ccgtaagagc gaccgtgtcc
    23641 gcagacgata actttatcgc cacgcaacaa acaggcaaca atgcggtttg ccgcttcact
    23701 taatttagcc ggcaatagct cagaggcgga aatttgggtt tgaatacttt cggtaaatct
    23761 atcttggatt ttatttaaca ttctttctaa cctaaaaagt tgggaatcca cacaggcgtt
    23821 tggtttcctt caaaagcaac cacatcaaaa cggcaatttg cagtttctaa actttggttt
    23881 tgtttaagca accacatatt agcggcattt tgccattttt gttgcttgcg gtaatcaata
    23941 ctctcaacgg ctgaaccgaa gcggttgctt ttacgctggc gaacttctac aaacacaacg
    24001 gtttgtccgt cttgcataat cggatccagt tcgccacctt taaatgcttg gttagcggca
    24061 acaaaacgaa gcccttgctg ttctaaaaac actcgggctt tttgttcata aaacgagcct
    24121 tgttcccgtt tattaataag cttgttgaat agctccattg cgatattgca tccaagataa
    24181 actacgttca atattacaat gttgtccggc ttttaactca ccggttaaac ctgaaatttt
    24241 gtagcccgga atatggcgga attcattgaa tttggttgcc aatgaccacg catcagcccc
    24301 cattgcgtat aaacgcatca ttgagaaatc gctattggct aaattctcgg cttttttata
    24361 ttcactagaa ctttgatcag ctaacagtgg cacttcacta aattttaccc cttccattga
    24421 agtgtaaaaa tcaatgccgt tatttggcga attactgcga gatgaggtat agatcgctaa
    24481 acgatctttt aaggttgagc tatcaatacc ttgtttaatt tctaatactt gctcggcatt
    24541 ccccaaaata tataaagctg ctttgctcac acctgcattt tgaatagcgg caacggcatc
    24601 aagcggttgg ttgtagtaac gcacatcagc atcgctattg gtaagctgac gccagcgttt
    24661 ggcaaaggct tctgccgagc ggttgccgta gtcatcttga ggggccgcaa cgatagcgac
    24721 actattaccg tcttgataaa ttttttccgc ccctgattgt gcctcagatt caggagataa
    24781 accgtagtaa cacacctgag caatattacg cacattttca gtggcattca gtgccaaaat
    24841 attcacgttt tggatttctg ggctaagtag catttcatca acacgagatt tgagcaatgg
    24901 cccgacaatc acatttgccc cttgctgttt tgcctgtgaa attaaggaat taacatcaga
    24961 tgaatcggta tcaaaagttt gcactgcggt tgagtcatca gccttagcat cattaaaacc
    25021 acgcttgata atatcaccca aaatttttgc atcaccactt agaggcaata gcaatgcgac
    25081 actgtttaac tgggtttgtt ggaaattact caccccttgt aattccgttg gcattacggc
    25141 aaccgcacta tggctcgggt attgggcttt ccaattatta attgcttgtg gcatttgtgc
    25201 cggtgtcgtc acattttgat tatagatatt aattaatgcc aaccaaccag caagctccat
    25261 ctcacccgct tcaggcacag ttttttccag cattcctcga tttgcatcac gcaaggtttg
    25321 ccaaataata tcgttatttt cttggcgttc acggttcatt ttatagaaat tgttaagttg
    25381 cgatcttgca cgcacaatgc caatcacatc tttctgattg gcagcaatac gggcttgggt
    25441 ttgaatataa cgcaaacgct gtgccgaact taatagcgga tcttgaatgg cttttaattg
    25501 gcttgttgct tgctcgtttt tcccttgtaa ggcggcaagc tgggcggaaa ccaaggcata
    25561 ctctaacttt tgcacctcgt tcatctctgc ggtcagaatt tcactaaagg tattttgagc
    25621 ctcatattcc ttattttcat caattaattt gcgtacagct aaaagttgat acgaaatttt
    25681 atcttccgct tctttggttt gatctgcttt attaatatag aattccgagc ttgaataggc
    25741 ttcattttta atggattcgg tgacaggatt taccgatgta caggcagaaa tgaataatgc
    25801 aatcgccgtt ggcaccaatg cctttttcat tgtatggttt aaaatagttg ccattgtcag
    25861 atcctcaata gaatataatg tgctaaattt aatgtgaaat cttacttatc aaacgagcta
    25921 aaagcaaatg aaaaacagac aaaattcatc tggaatcaac ccaaattacg gaattttata
    25981 tattgttgcc acgcctatcg gcaatttagg cgatattacc caacgggcgt tagacaccct
    26041 ttcatctgtc gatttagtcg ccgccgaaga cactcgccac agcggtttat tgctgagcca
    26101 ctacggcatt aaaaaaccgt ttttcgcctt gcacgaccat aatgaacagc agaaagcggt
    26161 cgttttagtc gaaaaattag caaaagggga aaacattgcg ttaatttccg atgccggaac
    26221 gccactgatt agcgacccgg gctttcatct tgtccgtcat tgccgccaag ccggggtaaa
    26281 agttgtgccg atccccgggg cttgtgccgc tgttactgcc ttatgtgctt caggcatagc
    26341 ttcagaccgt ttttgttttg aagggttctt accggcaaaa acaaaatccc gttgcgataa
    26401 acttaccgag cttgaaaacg agcctcgcac actgattttt tatgaatcca cccaccgtat
    26461 tttagacact cttgccgata tgcagactgt ttttggcgaa gatcgctatg tggtaatggc
    26521 gcgtgaaatc acgaaaacgt gggaaaccat ttatggagat caactgggta acttaattga
    26581 atggctaaat gaggatagca accgaattaa aggcgaaatt gttctggtgg ttgaaggtaa
    26641 accgcaaagt agtgaggaag ccttttccag ccaagcgatc aaattactga cattactctg
    26701 ccaagaactt ccgcttaaaa aagccgctgc cattgtggca gaaaccttcg gctataagaa
    26761 aaatgccctg tatcaatatg gattggagca ttttgagtaa cagacaagcg gtcagatttt
    26821 gtgagttttt tgcagattgg cactcccctc tctctgaaaa atgtttctga acgaaacatt
    26881 tcccggtctc aatactcgct acgctcgctc cttcggagcc gttggcaaag ccaacgttca
    26941 aatgtaaaca tttgtcccat aaggggagag agctaaatta ttcgcttgtc gacccctctc
    27001 cactcgtggg agagggacag attcttcttc gttcagaaga aaaatcaggg agagggggaa
    27061 gtttctcgca ctaaattccg ataagcatat gccataatcg caaacatcaa cagcaagtaa
    27121 agcggtaata attgaatgct gatagcatta gcaataaagc cgaaaatcgg tggcaataac
    27181 aggacgccga tataggcact tgccatttgc acgccgatca ccgattgaga cttgtcctcg
    27241 ccgaaaaacg caggggtcga atgaattaag cacgggaaaa tcggggcaca acctagcccg
    27301 ataataatta aacttgccag cgtaacatat ttgcctaacg gcaagcacag tatcgcaatg
    27361 ccgactaaga tcaaggctga accaagttta atcatttgtc tgttgctaaa tttaagcgtc
    27421 aagaagccac ttacgcctct gccaacggta atgccgataa agaaaatact gccgaacgca
    27481 gccgcttgtt ctaagccgac atctttaacc attacaaaat agctactcgc ccacagtccg
    27541 gcggtttgtt ctacgccaca atagccaaaa aaagctaaaa tgccatattt cacgcccgga
    27601 atttttagcg tttcttttaa gctcatcggt tttgccgaat ggttgatttc agcggtaatc
    27661 tgcttgcgta atttccaaaa aggcagtgag caaaacagca ttagcgttag cccgatttgt
    27721 aacattgaaa tggtgaaata gcctgcctcc cagcctcgcc cttgcaataa ggcgtagcct
    27781 aaaatgtgcg gcccgataga agctccaacg ccccacatac aatgcagcca gctcatatgg
    27841 cggcttgcgt agtgaactgc tacatagtta ttcaacgccg catcaaccgc tccagcccct
    27901 aagccgtaag gaattgccca taaacataag atccagaaag catcactgat tgaaaagccc
    27961 cacaatgcta aagccgttaa ggcaacgctg atgaccatta ctttgcctgt gccgagatgg
    28021 taggtcagtt tgtccgacat taagctagag gtaatagtgc caatcgacat aatcatcgag
    28081 accacaccgg cataggaaag cggaacagca agctgttggt gcattgacgg ccacgccgag
    28141 cctaaaattg catcaggcaa cccaaggctg ataaaagaga gataaataat agcgagtagg
    28201 aggttagtca tagcttacaa tcggtcacaa aaagcatcgc tttttgaacg ttggctctgc
    28261 caacgggagc gaagctgtga acaatcctta caaggattgt gaataatttt tgataaattt
    28321 tttgtaaaaa aatggcttaa ggagacctta agccaaattt tattatttca cttctgccaa
    28381 ataggcctta ttagcacggt caaaggtgtc taatacggct ttgcttggca ttggcgtgat
    28441 aagtgatacc acaatgatca ttagggtagc agcaataaag cccgggatca tcgagtaaat
    28501 ttccggtaag gcgagcttaa gtgtaatatc gccccaaaaa tgcacgatta acgcaccggt
    28561 cagcattccg gcaatcgccc caaaaccgtt catacgtttc cagaatagtg aaagcaatac
    28621 cacaggccca aatgccgagc cgaaacctgc ccacgcatta cgcactaagc caaatacttt
    28681 gctgtccggg tcttgggcaa tataaatagc taatgctgcc accgcaagca ccatcaagcg
    28741 gcttaaccaa accagttctt tatcggaggc ttgagggcgt aaaatgcctt tgtataaatc
    28801 ttcggtaatc gcacttgaac aaatcagtaa ttgagcggaa agggtactca ttaccgcagc
    28861 aagaatggca gataataaaa tgccggctac ccaagggtta aataacaatt tagctaattc
    28921 aatgaaaatt tgttccggat ttttgctgat attgccgact tgctccgggt tgccaaagaa
    28981 atatgccata ccaaaataac caatgcctat tgcccccagt aagcagataa tcatccaagt
    29041 catactgata cggcgtgcat tttcaagaga cttcacactt tctgccgcca taaaacgcac
    29101 cacaatatgc ggttgtccga aataacccag cccccacgcc attaagctga taatgcctaa
    29161 tacgctggtg ccggtgaaaa tgtcgttgta gtctttttgt gccatctcgc ctgcacggtc
    29221 gattaaggct tgcatttcat caaaaccacc taagttatac atcacaaaaa acggggtgag
    29281 aatcagggca aaaaccatta atgaagcttg aatagtatcc gtccaactta ctgctaagaa
    29341 accaccaata aaggtgtaaa gaatggtagc aacagcccca taccaaattg cttggtggta
    29401 aggtaagcca aataagtttt caaataccct cgcaccggcc acaacgcctg atgcacagta
    29461 aattgcaaaa aagagtaaaa aaatgaccgc tgataaaatc ttaattaaac gggttttatc
    29521 gccaaaacgg ttatgaaaat attcgggtaa ggttaaggca tcgccactgt gttctgtatg
    29581 cgagcgtaat ctgcctgcga ctaatttcca gtttagataa gcaccgatag ttaaaccgat
    29641 tgcgatccag ccttcgatca aaccgcctgc ataaacggct ccgggtaatc ccatcagcaa
    29701 ccagccggac atatctgatg caccggcaga aagtgcggtc acaaagctac ctaaacggcg
    29761 accgcctaaa atatagtctg aaaggttatt ggtaacacga taggcaataa agccgatggc
    29821 aatcattcct agaatataga caacaaacat aattgttgtt ggatcaagac caaacattat
    29881 taatgaatcc tcaagatttc ttattgtata aagattaaag tgagtaaagg gtaaaagatt
    29941 acctgaaata atcaaaatgg caacacaaaa ttaccgtccg cccagctcag ctgaaatttt
    30001 ttctgctgtt tcttgaatag ccggtagtag attttcccgc cccagctgat ttaaacgagc
    30061 agttgaaagc gaaacagaaa tcgcataatg gactttttgt tggtgatcaa aaatcgggca
    30121 agcaatacaa gaaaccccta attcattttc ttcgttatcc attgcaaaac cttgacggcg
    30181 aatggtttcc agctcggttt gcattccgtc aatcgtggtg atggtattga ccgtcagttt
    30241 ttgaatgatg tccgatttag tctgccaata ttgtggaatg taatctgccg aaccataagc
    30301 aagaaacagt tttcccattc ccgagcaata gagttgcatt tgttgcccga tataggctcg
    30361 ggtacgcatc attccggtgg tagcttctaa tttattgatt aaaatagcgt gatcgttttc
    30421 ccgcatcgca aaatttaccg tctcgcctaa ggttaaattt agggcttcta aatgtggggc
    30481 ggcaatatgc aaaatgttaa tcgaacttaa ggctcgctgc ccgattgcca aacatttggt
    30541 ggttaaacga taactgcccg cagtcggtgc agggcggacg tagccctctt gttgtaagcc
    30601 ttgtagcaga cggtgaaccg tgcttttgtt cagccccgaa agctcggcta aatgggcaag
    30661 cggacagccg tttgggaatt tcgctaacaa ttccaatagt gttaagccac gaattaaact
    30721 ttgatttcca ctcgattcct tttctttctt tgcattcatt tggctgctcc caaaataata
    30781 tgatctaacg gcatatccca actctcaatc ggtaattgtt cgacttgctg acattcgtgt
    30841 gccaaaccga cactaatcag atgaggtgct tgagcaaggg ttctatcata aaagccacct
    30901 cccattccca gccgatttcc ggctttatca caagcaacaa gtggggtaaa aatcatctct
    30961 aattcttgca acggaaggat atttctaaca tctaatatcg gctcttgaat ccccaagcgg
    31021 ttaaatttta gaatagtttt gcaattgtaa tttacaaaca ataattgacc gcttgtaaaa
    31081 gggtgcaaca gcggcagata cagctttttg ccctgttgaa gtaattgttc cattaaagga
    31141 ataggagaaa tttcaccgtt aaaaggcaaa taaaaggcaa tatgtgaggc ttggtaagat
    31201 tcaatcaatg aaagagcttg aggaataatg gattcggctg cttgagtttg ctgaccggca
    31261 gttaaacttt gccgtttaag ccgcattgat tgccgtaatt ggctacgaag atcggttaaa
    31321 gatgattgat tcatataaag acccgagatg ccgctaccag taatggtcct tgaaccagtc
    31381 ggttcaaggg agtcaaactt aactgctttt aggcttctta ctcctaatta aattagggta
    31441 agcttgctca ccagcgttag atgtccaact caaagtttca aattatcggc tcagggacgt
    31501 aactcgtaac gcacacccca ggcaagactt atagtaacgg aatttgatga tttttcctag
    31561 tatttaatcc cacaaaatgc aaattctcaa tctttttggc tctattccta atcaattcga
    31621 ttaaaaatta cctaattgga ttgaaatttg ccaagcgaat tatctaactg ctcaatacaa
    31681 gccaccaaca catttttatt ttctgcattt tggcgttggg cttgctccag ttcataattt
    31741 aaattcagtg ccacaatcgc taacactttt tcaagctgaa taatgccgga ctgctctttc
    31801 aataccacca cacgctcttc caaacgctgt gctgaagcca gtaaatgctc ttgctgttca
    31861 acagggcatt gcaagcgtaa aacctgccca aaaatctgta gttcgatatt atttgccgac
    31921 ataaatacga aatcctcact taatcgcaaa atttttgcta tattatgcca ttctttagca
    31981 aaatcacaaa taatcccatt atggctatca cagattccca acaatttaaa caactggtat
    32041 cacaattaca aattgatgat acaccggcag agtttcacgg ttttttatgc ggtttaattg
    32101 ccggcggtat tcaagatgag tcttggaaaa ccctcaccta ccaatttacc aatgacggac
    32161 acgcattttc catcgagccg ttaaacactt taaccgattt ttatcagcaa ttaagtgaaa
    32221 gcttttcaga agccaacacg ctgtttagcc tttggttgcc acaaaacgaa gaagatggtt
    32281 ttgccttagc tgatggtatc tccgaatgga caaacagttt cttacttgga cttggcgttg
    32341 ctcaacctaa attacaacaa gaaaccgatg aggttggcga ggcaatcgat gatttagatg
    32401 aaatcgccaa actaggctac agtgacgatg ataataacga ggaactactg gaggctggcg
    32461 aagaagtgtt ggaatatctg cgagttttag ccttattctt gcacagccat tttgctttag
    32521 gcgtgccgaa aaccgaagaa aagccaccat tacactaatg aataaataca agcggttcaa
    32581 tttcatctct attttgcaaa tatattatgc ggggcgaaaa atatttcgcc cctaccaaaa
    32641 tcaaaggaaa aaccaatgtc agaattaaaa aacgatcgct atttaaaagc gttattgcgt
    32701 gaacctgtgg atatgacccc ggtctggatg atgcgtcaag ccgggcgtta tttgccggaa
    32761 tataaagcca cccgagcaga agccggcgat tttatgtcac tctgccgtaa cgctgattta
    32821 gcgtgtgaag tcaccttaca accgctacgc cgttatgaac tcgatgcagc tatcctattt
    32881 tccgatattt taactgtgcc tgatgcaatg ggattaggtt taagttttgg tgcaggtgaa
    32941 ggccctaaat ttgcccgccc ggtggcaagc ctcaatgatg tcaatcagct accgattcct
    33001 gatccggaag acgagttgca atatgtaatg aatgcggtgc gtaccattcg ccgagaattg
    33061 aaaggcgaag tgccactaat tggtttttct ggcagccctt ggacactcgc cacctatatg
    33121 gtggaaggtg gttcaagcaa agcatttacc aaaatcaaaa aaatgcttta cgctgagcct
    33181 cacattctac acaaattgct ggacaagtta gctgacagtg tcatcttata cttaaatgcc
    33241 caaatcaaag ccggtgctca agcggtgatg gtattcgaca cttggggcgg tgtattggct
    33301 cacgaggatt acaaagcctt ctcattacac tatatgcaca aaattgtgga cggcttaatt
    33361 cgagaaaatg aaggacgtaa agtgcctgtt accctattca ccaaaggcgg aggcttatgg
    33421 ttagaagcga ttgcagaaac gggctgcgat gccgttgggc tagattggac agtcgatatt
    33481 gccgatgctc gccgccgtat tggcgacaaa gttgcgttgc aaggcaatat ggatccaagc
    33541 gtgctgtatg caagccctga acgaatcgaa caagaagtaa aaaacattct tgccggcttc
    33601 ggcaacggca gcggacacgt ctttaatctt ggacacggca ttcatttaga tgtgccggtg
    33661 gaaagcccga aagtgtttgt tgatgcgatt cacaactact cgaagcagta tcataaataa
    33721 tggataaaat gccctctctc cttgtgggag agggacagat ttttctttgt tcagaagaaa
    33781 aatcagggag aggggcaagc ggtcattttt atacagaatt ttgcaaaatc gttcccttct
    33841 ctctgaaaaa taaagaagga aatacaatga gaaacccgat tcataaacgc atggaacgtt
    33901 tcgagccttg gcaaaacacc acatttatgg cgtgcctatg cgaaagaatg taccccaact
    33961 atcagctttt ttgtgaagta accgaacagc ctgaaaaagc taaggtattc caaaatattt
    34021 taaatttagt ctgggaatat ttaaccataa aaggggcaaa aattaatttc gataaccaac
    34081 tggaaaaatt agaagaaatc attcctgatg tgaacgaata tgcgtttttt ggtgtcttac
    34141 ctgcacagga agcttgcgaa gccctttctg aacttcttca cagtattatc gctggttcaa
    34201 cccttgaaca agcaatccgc atcagccaaa tttcattagg cacagttgcc agctatttgg
    34261 aaatgcaaca agataaagaa ctgaacgagc aagagctaaa gaattctgaa gaaattcaag
    34321 aagaactgga cgtacagtgg caaatatacc gcttgctaaa cgaatgtgaa aaacgtgatc
    34381 ttgatctcat ttttgaactt aaagatgaaa tcagaagcag cgggattagt aatatcgggt
    34441 taaatattaa ccaatagcat tgatatttgc aaaatcttgc ttaataatac tttgagaaat
    34501 cttaactttg aattaagcta tcgcaaggtt tcaataactt ctcagacgtt ttacgtcatt
    34561 tattaaaaac acatatctta gaggataaaa ctatgaacaa aactgagtta atcgatgcta
    34621 tcgccgctgg tgcaaactta accaagaaag atgctaaagc agcattagaa gcaactcttg
    34681 atgcaatctc tgcaagctta aaagcaggcg acgctgttca attaatcggc ttcggtactt
    34741 ttaaagtaaa tgagcgtaaa gcacgtactg gtcgtaaccc aaaaactggt gaagagatca
    34801 aaattgcagc agctaaagta cctgcattcg tttcaggtaa agcattaaaa gatttagtaa
    34861 aataattctt taaagat
//
LOCUS       DANLXD010000011        34830 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.011, whole genome shotgun sequence.
ACCESSION   DANLXD010000011 DANLXD010000000
VERSION     DANLXD010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 34830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34830
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.011"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(178..888)
                     /locus_tag="PXD18_000437"
     CDS             complement(178..888)
                     /locus_tag="PXD18_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HDL6300901.1"
                     /translation="MFMVIQLALYNLQTYEVGRNATTIFMTTDKVYTGGSTWTYLFAD
                     ADNKITSVREMNGFGDVEKEFKCGEYKEAVTIASKEDLAKRKTQPRLWSSIYMSPEQN
                     MMWVTDNTSKNLENAKQDAFKQCEKNGGRNCQMILSFSNMCLAFAQGYKDGQGFEDFG
                     YGIVSSLAEENALENCNQKGGSSCLLSAPAVCAIPCDILSNNKCMYDQPQIIIPGKNN
                     NQPINPPANGNGEHWLSN"
     gene            complement(857..1003)
                     /locus_tag="PXD18_000438"
     CDS             complement(857..1003)
                     /locus_tag="PXD18_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300902.1"
                     /translation="MIKPLDSVYWRGKDVSEFFARKRLPDTAVQCVKDNELSYVYGYS
                     TSFV"
     gene            complement(1121..2338)
                     /gene="fabB"
                     /locus_tag="PXD18_000439"
     CDS             complement(1121..2338)
                     /gene="fabB"
                     /locus_tag="PXD18_000439"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HDL6300903.1"
                     /translation="MKRVVITGLGVISSIGNNKEEVLESLKAGKSGIEFVPEFAEVGM
                     RSQVAGTIKLNPAELIDRKIYRFMGDAAAYAYLSMKEAIEDSGLTEEQVSNDRTGLVI
                     GAGTGSAHSQLVACDAVRGPRGVKAVGPYAVTKTMASSVSACLATPYKIRGVNYSISS
                     ACATSAHCIGHAMELIQLGKQDVVFAGGAEELSWECATEFDAMGAVSTKYNETPTKAS
                     RAYDANRDGFVIAGGGAVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGA
                     ERCMRQAMATVNGEIEYINVHGTSTPVGDVKELGAIRNVFGDKTPAISSTKSMTGHSL
                     GAAGAHEAIYSLLMLDNNFIAPSINIETLDEQAQGMNIVTERQDKALTTVMSNSFGFG
                     GTNACLVFQRYSK"
     gene            2599..5136
                     /locus_tag="PXD18_000440"
     CDS             2599..5136
                     /locus_tag="PXD18_000440"
                     /EC_number="4.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate cyclase"
                     /protein_id="HDL6300904.1"
                     /translation="MKTLTLTANKITAVEGAAIGANQGSFAQKLNSTKARIDQLNAYR
                     IERAINANNHHFMHVFSLIPLLIHLNHPVLPAYVENAPQGIWHFQLSDYQKQFLVSYR
                     FDEAISADHLGPHPSFDALYSMGSTGTITQTSCSDLDLWLCYPNHFTIEQYKLMELKI
                     NKLQEWAKTFQIDINIYLMNPEQFKSQTYNSSVTDEHSGSAQHFFLLDEFYRSAILLA
                     GKRLLWLHLHKNEYQNVHNNPEIDLTEWIDFGDFSSLSTSEFFGASLWQLYKGINNPY
                     KSAIKILLLECYAHTYPKTKLISKEFKKKLLSDNALEYHFDPYLAMLELVTEHLRSRK
                     EWVKLDRLRVCFYAKAVEGEINNNWRSRDLDELVNQWSWSEKQIQLLQNRQHWKIKQV
                     MNHENMLIDHLLQSYRNLIHFARKFHINPSIMTNDTDILMRKLYSVFEALPGKISLIN
                     HKISSNLAEKAITFIEAKVGSALQPGWYLVNQAPKSRYDSENRYVHYNKSPIKLIAWG
                     YFNGIINAATNLHTVSPNLDIEKLRQFITDLRLSFPIQAPEVTNDDMHHPNEIRNLVI
                     ALNLVQDPTEHIDELPKKVYPSDLFNFGKAQKTLVGSVSIIYRNVWNEIRTQHFDGED
                     AILKALKLVSNRIYQGNSSPQSVNVFCYSKYLRSELRDFVADLVHKCITIQTGCLLQE
                     NEFSTLKVAGKTWQFLFHKKTFSIKQIDEQQAVENLNSFAKTKQNAKSENEKKKEFPQ
                     QISEFASEGFLQFFFEDNVDNSFNVYVVDERNNVESYYNCFGNKEEKIRKINKLQNEK
                     QLKTETPASFGSFNHPQFYQLISPNGELCIVPFQSRQHLDYLAQKHH"
     gene            5167..7035
                     /locus_tag="PXD18_000441"
     CDS             5167..7035
                     /locus_tag="PXD18_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDL6300905.1"
                     /translation="MSGLVSPELIKTVALLATSVTIVPLFKRLGLGSVLGYLVAGCLI
                     GPSGIGLFQDPAAVVHMAELGVVMFLFIIGLEMHPELLWAMRKAIFGRGFLQVAICGT
                     LLTLAGIYLLGFSKEVAFIAGMGFTLSSTAIVMQVLEDKGISSTPKGQRIVATLLFED
                     LAIVPLLASVAFLAPNQVDAESSTNWSAIGLSLVAVLILVASGKWLMNPIFRVISKAK
                     VREMMTAAALLVVLGSALLMEISGLSMAMGAFLAGVMLSESSFRHQLEADIEPFRGLL
                     LGLFFMGVGMSLDLSLVLNNWLWLLVIVAVYVIGKGLGIFIAASITRLTLNESIVRTT
                     IMAHGGEFAFVLFSAAATAGILTPDTHATLTAAVIVSMLLSPLLILIKQGVRKKKAKN
                     ESTNMTGVELPEDLEANVLVIGFGRFNQIVCQALLAKGLSVSVIDSNTDHIRAAARFG
                     FKLYYGDGARLDVLRASGIANANCVIVGVGNPERTEKIVELIKSEYPLVPVFARTYDR
                     QSAVDLVKKHHVDYHIRETFESALALSQAAIERLGSSEEEAKQIISYVRRLDAERFNE
                     ELLHGFSAEVIRKYWVPTPWVNPQHEGSALNEETADILEELGETVEVIKVDITDKN"
     gene            complement(7195..8091)
                     /gene="malM"
                     /locus_tag="PXD18_000442"
     CDS             complement(7195..8091)
                     /gene="malM"
                     /locus_tag="PXD18_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose operon protein MalM"
                     /protein_id="HDL6300906.1"
                     /translation="MKKTLLSTAIFFAHLLVVSPSIANGSAGKSIHINSAELAQIQWQ
                     DVPFSQTVKTDLSEQHKQAFTTAFAGIASPVAAYRIPANQGTLEIEIESPVMDKNVFV
                     PTAVVLDSQFNVASTYPSSEFKLLEERGLKGSRLGAELNLTPAMNQDYIYLLIYTTQQ
                     DLAKTTMMPHPAKTYAKATGKQPPAINDIEVAHSLKGQIHINVTGSNGTKFIGLPTEI
                     FSSNKAATPAAKTAIPLPIKENPVAVKTAVDKDTEAYFNQAVMKAIKAKDINKAMNLV
                     NEAEKLGLTSPRQIFLKNVSSN"
     gene            complement(8172..9461)
                     /locus_tag="PXD18_000443"
     CDS             complement(8172..9461)
                     /locus_tag="PXD18_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltoporin"
                     /protein_id="HDL6300907.1"
                     /translation="MKKTVLAVAISGAMFAASASAVDFHGYARSGIGWTSGGGEQSAF
                     TVNGGGSKYRLGNESDTYAELKLGQELFKSGEKSIYFDTNLAYGGTLHNNDWTPTSPA
                     LRELNVQFKNFADSLPGATLWAGKRFYQRHDVHMNDFYYWDISGPGAGVENIDLGFGK
                     LSLAVTRDTERGGANTFGYTTVYKLDPSTGKIKLDKQRNKADVYNDIFDVRLAGIELW
                     KDGSLELGFDYGNAHAKKGAALEKGATKNGYMVTAEYTQGNFFGGFNKFTAQYATDSM
                     TSWNNGHAQGSKADNKGNMLRLINQGVVQASDKVEVMYALIYEKTKLDNKQGKTWYSA
                     GIRPMYKWNDTMSTLLEVGYDRIKDQATGKKNDLVKYTVAQQWQAGNSIWARPAIRVF
                     GTYARWNDKFNTKARTDAGYKAKDGEFITGVQFEAWW"
     gene            complement(9559..10677)
                     /gene="malK"
                     /locus_tag="PXD18_000444"
     CDS             complement(9559..10677)
                     /gene="malK"
                     /locus_tag="PXD18_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005552148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose/maltodextrin ABC transporter ATP-binding
                     protein MalK"
                     /protein_id="HDL6300908.1"
                     /translation="MANVSLRNVGKSYGDVHISKDINLEINEGEFVVFVGPSGCGKST
                     LLRMIAGLEDITTGELYIGGKLMNEVEPSKRGIGMVFQSYALYPHLDVAENMSFGLKL
                     AGVSKAERDQRVNQVAEILQLAHLLDRKPKALSGGQRQRVAIGRTLVSQPEVFLLDEP
                     LSNLDAALRVQMRVEISKLHKKLNRTMIYVTHDQVEAMTLADKIVVLNAGGIAQVGKP
                     LELYHYPANRFVAGFIGSPKMNFLPVKVIAVEPERVKIELPDANHHNFWIPVSGEGVN
                     VGDNLSLGIRPEHLVPSDQTQVTLHGIVQVVELLGNETQIHLEIPEIKQPTLIYRQND
                     VVLVNEGDDLNIGILPERCHLFKEDGTACKRLFVEKGV"
     gene            11098..12288
                     /gene="malE"
                     /locus_tag="PXD18_000445"
     CDS             11098..12288
                     /gene="malE"
                     /locus_tag="PXD18_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005537801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose/maltodextrin ABC transporter
                     substrate-binding protein MalE"
                     /protein_id="HDL6300909.1"
                     /translation="MKNKCVKFTLATLATLVLSGTVMAKMTEGKLVIWINGDKGYNGL
                     AEVGKKFEKDTGVQVLVEHPDRLEEKFAQVASTGDGPDIMFWAHDRFGGYAQSGLLAE
                     VNVSKEFKDKFVDFAWDAETYNGKIIGYPVAIEAISLIYNKDLVKEAPKSWEEIIELD
                     KKLKKEGKNAIMWNLSEPYFTWPIAASNGAYAFKFANGKYDPKDIGVNNEGAVKALQF
                     VVDMVKNKHISADMDYAVAEASFNKGQSALTINGPWSWGNIDKSGIKYGVTLLPTLNG
                     QASKPFVGVLSAGVNSSSPNKDLAKEFLENYLLTDDGLDAVNKDKPLGAVALKSYQEK
                     LAADPRIAATMANAKNGEIMPNIPQMSSFWYAEKSAINNAVTGRQSVKEALDDAHSRI
                     QKQQ"
     gene            12407..13945
                     /gene="malF"
                     /locus_tag="PXD18_000446"
     CDS             12407..13945
                     /gene="malF"
                     /locus_tag="PXD18_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalF"
                     /protein_id="HDL6300910.1"
                     /translation="MLTQTQSKSTHWLKYLLAGLVLLLDFYLVVLMYSQGEYLFAILT
                     LIILTSGVYIFTNKNTYAWRYVYPGITGMAIFILFPLVATIAIAFTNYSGSNQLSFER
                     AVSVLTEQRYFAGDKYQFTLYPQADNKYQIALTNPTTEQTFVSEPISLATGTNVVVTE
                     QNRPTGEVAPLKVITQNRAALQSMKVVLPNNNELTMSSLRQFSEQKPRYQFDEENKIL
                     LNNETGKRYQANDETGFFQSIDENGHWQSETLEPGYTVTSGFNNFIKIFTDEGIQKPF
                     VQIFIWTVIFSLLTVVFTVILGMVLACLVQWEALKGKAVYRVLLILPYAVPSFISILI
                     FKGLFNQSFGEINMILNQLFGISPEWFNDPLLAKVMILIVNTWLGYPYMMILCMGLLK
                     AIPADLYEASAMDGASTWQNFSKITFPLLLKPLTPLMIASFAFNFNNFVLIQLLTNGR
                     PDMIGTTTPAGYTDLLVSYTYRIAFEGSGTQDFGLAAAIATIIFLLVGGLALLNIKAT
                     KMEL"
     gene            13998..14888
                     /gene="malG"
                     /locus_tag="PXD18_000447"
     CDS             13998..14888
                     /gene="malG"
                     /locus_tag="PXD18_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001252048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalG"
                     /protein_id="HDL6300911.1"
                     /translation="MAIVQSKSVRYRVWATHFILICFLALIIFPLLMVIGISLRPGNL
                     AIGDIIPSQISWEHWQAALGFDVTHADGTVTPPPFPVLRWLWNSIKVATITSIGIVTL
                     STTCAYAFARMKFKGKKTILQGMLIFQMFPAVLSLVALYALFDRLGQYVPFLGLNTHG
                     GVIFAYLGGIALHVWTIKGYFETIDGSLEEAASLDGATPWQAFRLILLPLSVPILAVV
                     FILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLYPQNYLWGDFAAAAVLSAIPITL
                     VFLLAQRWLIGGLTAGGVKG"
     gene            14963..17020
                     /locus_tag="PXD18_000448"
     CDS             14963..17020
                     /locus_tag="PXD18_000448"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HDL6300912.1"
                     /translation="MKNALPYLCLFYTSSLFAQSWQHSHFSDFNDDLEKHFFQSQVQL
                     EKGSYPLRFKFGEQCYQPQQAIKLNQSVALVPCINEAPQLRLFRQGNYLAQIDLRSGT
                     PTPTISVEQQLQHNEAMFQSCPNWDKKPIEIDVSSTFAEGESVSDFYSGNTAIVKNGK
                     VTLMPNENASGLILLEKSNTENTATFDWKNATVYFVLTDRFYNGDPTNDHSYHRQKDG
                     MQEIGTFHGGDLKGLTEKLDYLQQLGVNVLWISSPLEQMHGWVGGGDKGDFPHYGYHG
                     YYHLDWTKLDANMGTEDDLSRFVQQAHQRGIRVLFDVVMNHTGYATLADMQEFNFGGF
                     YLTPDEISRTLGEKWTHWKPKSGQNWHSFNDFIRFNDNQAWQNWWGKEWVRADIADYD
                     SPKFDDLKMSLAALPDLKTESEQAVKLPEFFANKNTNAKTLPNAKVRDYLIGWLSDWV
                     RKYGIDGFRVDTAKHVEKSTWLVLKQSAQQALNEWQKANPNAGFNDRFWMTGEAWGHG
                     VFKSDYYQNGFDAMINFDFQDQAKQGLNCFAHIEPIYAEMNRKLSDFNVLSYLSSHDT
                     RLFFHSDSEQNIEKHKTAANLLLLSPGAVQIYYGDESGRTFGATGSDLIQGTRSDMNW
                     QELQQDPQKQALHQHWQKLTQFRQRHPAIGAGVHQLIKNDSYFAFKRVLNEDKVMVVW
                     AGN"
     gene            complement(17134..19860)
                     /gene="malT"
                     /locus_tag="PXD18_000449"
     CDS             complement(17134..19860)
                     /gene="malT"
                     /locus_tag="PXD18_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MalT"
                     /protein_id="HDL6300913.1"
                     /translation="MLIPSKLVCSFRLQNSIPRKRLIQELDKSCSYPVVLINAPAGYG
                     KTTLVSQWIENKKNIGWYALDEGDNNSDRFATYFSAALHSAINEEIDVLLEENRKANL
                     LALFNQLLIKAAAFSEHFYLAIDDYHIIENDEIHEALKYWIKHQPSNMTLILISRSIP
                     PLSIASLRVQEQLLEIDINQLMFDHQESTAFFQARLGSELNQQDVIALCNEVEGWPTA
                     LQLISLFAKNKSHTLQVPLQDIAKRLAKSNHFHINEYLADEVLNKVDEETRLFILRCS
                     VLHSMNESLVQAVTGEQNSRTKLESLEKQGLFLQQMANSKWQSSDDSWWKFHPLFASF
                     LNLCCQNELYAELPQLHQKAANAWLQLGYVTEALHHAMQLSDTGLLLNILSKHAWTVF
                     HQGELKLLEESLNCLDYAHLTEHTNLVLLKAWLVQSQHRHIEVGGILADFSRALTENK
                     IELSKTANAEFNVLRAQVAINSGDENTALQLASEALNDLSENAYYAHIVATSIIGEAH
                     HCHGNLAEALAMLQKAERMARQHHTYHNILWSQLQQSEILLAQGFSQAAYEMLDKASE
                     FVKENHLQKVPMYEFLLRSKGKILWEWYNLDKAESMAVAGMNALSKFEDKLQCLTLLT
                     KISLARGNLDNTARLLGEVEQLEHSHSYHHDWIANADQVRIFYWQMTNDVSAVRNWLI
                     QNPSPVSDKNHFTQVQWRNIARSRILLEEYHEAKAILDNLIETAEKFSLISDLNRALI
                     VRNRLYFLQGEKELAQQDLIQALKLTRQTNFISAFVIEGDVMAQQIRHLLQLNVLDEL
                     VLHKAQFILRNINQFYRQKFAHFDENFVNQLLKNPKVPELLKISPLTQREWQVLGLIY
                     SGYSNEQISDELQVAATTIKTHIRNLYQKIGVTNRNEAISYTKELLMLMGYH"
     gene            20024..22393
                     /gene="malP"
                     /locus_tag="PXD18_000450"
     CDS             20024..22393
                     /gene="malP"
                     /locus_tag="PXD18_000450"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin phosphorylase"
                     /protein_id="HDL6300914.1"
                     /translation="MTFNSIVEKYCRYFDVTDPKHFTLQQWYQVVAEGSLELIYSQPA
                     TKPTESRHVNYLSMEFLIGRLTGNNLMNLGYYEQIRDYLKQYQVELVDVLEQERDPAL
                     GNGGLGRLAACFLDSMATVGQNATGYGLHYQYGLFKQSFKEGMQKEAADTWARDSYPW
                     HRFNPSKTRHIGFGGKIKHIQADQYEWQPKLTIQGKAFDLPIVGYKNNIIQPLRLWQA
                     DSDQSFDFDAFNEGKFLSADKTIVNAAALTQVLYPNDNHQAGQKLRLMQQYFHCACSV
                     ADILDRHISEGYSLEDLAKRQVIQLNDTHPTLAIPELMRVLLDEHQFTWEQAWDICSN
                     TFAYTNHTLLPEALEQWDQRLFKQLLPRHYQIVEKINDIFHDKVQAEFGDDAKIWEKL
                     AVLFDYRVRMANLCVVTCFRVNGVAEIHSDLLVTDLFPEYHKLFPTKFCNVTNGITPR
                     RWIRQANPQLSDLLDRTLKQDWTHNLELLKGVEQYADDTGFREEYQRIKRNNKVVLAN
                     EIHKTLGLNVNPNAIFDVQIKRFHEYKRQHLNLLNIIATYQSLKANPNQDYTPRLFLF
                     SGKAAPGYYLAKNIIHAINNVADIINNDKQVNDRLQVAFLPDYRVSLAEKIIPAADVS
                     EQISMAGKEASGTGNMKLALNGALTLGTLDGANVEIADMVGEENVFIFGHTVESVREL
                     LAKGYQPKAYYNQDPILKNAVDFLATGKASNGDKEAFKLMLDSLLERDPFLVFADFDS
                     YRQAQEKIGVAYLDQETWLRSAILNTARLGAFSSDRSIKDYQQRIWLNR"
     gene            22475..24553
                     /gene="malQ"
                     /locus_tag="PXD18_000451"
     CDS             22475..24553
                     /gene="malQ"
                     /locus_tag="PXD18_000451"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HDL6300915.1"
                     /translation="MKITAKQYYRAGIMPYFFDERGVKKTASEKIKHSLFKAFNGNTQ
                     ARETPIPTVNIFYQHQPCFLPFHLADKKHPLTGTWQLQLENSNQIISGKIKARGITLP
                     QDLPLGYHQLQLKTVDKTFNCTIIIAPERCYQPQAVIEQKRLWGTFLQLYTLKSAHNW
                     GIGDFGDLKDFIQQIAPYQADFIGLNPIHSLFPANPNSASPYSPSSRRWLNIAYIDIN
                     QLAEFQQSDEAQTWFHSAEIQQQLSELRTQDWLNYEQIIPLKLKGLRFAFAKFQQNMT
                     ACAAPAFIEFVQKGGESLQVQATFDALHQHLSAQFADQWGWDFWEKAYQDYHSAAVQQ
                     FRETHKTDIEFYLWLQFVADQQLAECDAICRQQNMRIGMYRDLAVGVSPNGAETWNDK
                     QLYCLNASVGAPPDVLGPQGQNWGLTPMNPHVLKQQAYRPFIELVRANMSHCGALRLD
                     HIMSLLRLWWIPKGDSAVNGAYIRYPVDDLIAILALESQRHQCLIIGEDLGTVPKEIV
                     SKLKNAGILSYKIFYFEFDEQGKSRDLQHYPYQAMTTLSTHDLPTINGYWRGYDFELG
                     EKFGVYPNSNILAILKQDRVNAKAKILQRLQEHNVEIAPEISEQLNSPVNTAFIHCLQ
                     TYVANVSSGLFGFQPEDWLGMTEPVNIPGTSTQYANWRRRLSVNLEEIFTDKDIQALL
                     KEVNLIRKNQ"
     gene            complement(24618..26279)
                     /locus_tag="PXD18_000452"
     CDS             complement(24618..26279)
                     /locus_tag="PXD18_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HDL6300916.1"
                     /translation="MSEIALTVSLLSLVAVLGLWIGHIKIRGVGLGIGGVLFGGLFVS
                     HFMAQFDVKLDAHTLHFIQEFGLILFVYSIGIQVGPGFFASLKHSGLKLNGFAVLIVL
                     ISGILVILIHKFFNVPLPVILGIFSGAVTNTPSLGAGQQVLAELSAESVTEIMGMSYA
                     IAYPFGIIGILLSMWLIRILFRINIEAEAEAFNKQQNRSKDQLSTLNVRLTNPNIHGL
                     TLKQIPDFNLHEVAYSRLKRGNELSIPRVDTILQIGDILHLVGEESSLRKMQIILGEA
                     VDVSVSTKGTIYRSERAVVTNEKVFGKQIRQLMLKGKYDVVISRLNRAGVELVPTGDM
                     TLQFGDVLNLVGRQADIEMVMTIIGNAHSKLQQVQMLPIFIGIGLGVLLGSVPIYLPG
                     FPVALKLGLAGGPLVVALILARIGSFSKLYWFMPPSANLALREIGIVLFLAVVGLKSG
                     GRFLETLLSSEGVEWICYGAIITFVPLMIAGLIARMYNKVNYLTICGLLAGSMTDPPA
                     LAFANEIKEGNGAAALSYATVYPLVMFLRIMLPQVLAIMLWVSGG"
     gene            26497..27873
                     /locus_tag="PXD18_000453"
     CDS             26497..27873
                     /locus_tag="PXD18_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HDL6300917.1"
                     /translation="MLSNEVFISIIVLLILSLLRINVVIALIISALTCGLIGNLGVEG
                     AGFTEALEKTIKSFTGGLGGGAETAMNYAVLGAFAVALSKSGVTDLLAYKVIKSFGHS
                     PSGRSVTWFKYIVLFVLVAFAMSSQNLIPIHIAFIPILIPPLLSVMNKLQIDRRAVAC
                     ALTFGLTATYMLIPAGFGQIFIESILVKNINQAGEPFQLVTTTAEMTKAMLIPVSGMI
                     LGLLFAFFVSYRKPRVYIENMPEPTADDIEARVANVKPFHIGISIVAIIATCSVQLAT
                     NSTIIGGLVGLVIFALGGVFRLKESNDVFQAGLRLMAMIGFVMIAASGFAGVVNSTGG
                     VPALVESLRDVISSKEMAALLMLVVGLFITMGIGSSFSTVPIITSIYVPLCISFGFSP
                     LATMAIVGVAAALGDAGSPASDSTLGPTSGLNADGKHDHIWDSVVPTFIHFNIPLLVF
                     GWIAAMTL"
     gene            27971..28774
                     /gene="xthA"
                     /locus_tag="PXD18_000454"
     CDS             27971..28774
                     /gene="xthA"
                     /locus_tag="PXD18_000454"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HDL6300918.1"
                     /translation="MKFISFNINGLRARPHQLEAIIEKHQPDVLGLQEIKVADEDFPY
                     DLVNHLGYHVFHHGQKGHYGVALLTKKEPIAVRKGFPTDVLDAQKRMIMADIETDFGV
                     LTVLNGYFPQGENRSHETKFPAKQKFYADLQNYLESELKPENPIIIMGDMNISPTDLD
                     IGIGEPNRKRWLRDGKCSFLPEEREWLDRLYSYGLVDTFRAGNPDVNDKFSWFDYRSK
                     GFDDNRGLRIDLILASKSLAERCVETGIDLDIRAMEKPSDHSPVWATFK"
     gene            28928..29512
                     /gene="lptC"
                     /locus_tag="PXD18_000455"
     CDS             28928..29512
                     /gene="lptC"
                     /locus_tag="PXD18_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HDL6300919.1"
                     /translation="MNKRLTVILLIIVAVLGGWYYSLQEKENTGLDQLIKKEGQPEYV
                     GNKMSTTVYDLKGNPQYFAQATEIKRYESTERTEFFKPFIELFAKESTQKQWKVSADY
                     AEITKEKMLNLKGNIKLVALDPASRLQQITTDTLTVDLNTQDIFTESTVKSIGSGFTT
                     TGVGLKGNLKQQVATLQKDVKSYIEPTIIQETKE"
     gene            29536..30042
                     /gene="lptA"
                     /locus_tag="PXD18_000456"
     CDS             29536..30042
                     /gene="lptA"
                     /locus_tag="PXD18_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HDL6300920.1"
                     /translation="MKLMFKSILVSVLLGSSFSAYALKGDTDQPINIDSGSQSLDMTN
                     NIVTFSDNVVITQGSIKVTAANVKITRQEGKKETIDATGSPVTFQQTLDNGKPVNGKG
                     NSVHYDLNSEFLTLIGNAELKQQGSFIKANKITYDVKKQQLKATSGGKTRVKTVLIPN
                     ELQDNKKK"
     gene            30054..30779
                     /gene="lptB"
                     /locus_tag="PXD18_000457"
     CDS             30054..30779
                     /gene="lptB"
                     /locus_tag="PXD18_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005727816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HDL6300921.1"
                     /translation="MSVLYAEHLAKSYKQRQVVKDVSLNVKSGEIVGLLGPNGAGKTT
                     TFYMVVGLVRHDHGTIRIDDQDISTLPMHDRAKQGIGYLPQEASIFRRLSVYDNLMSV
                     LQVRKNINDKQRKERAEELITEFHIEHIRNSLGQSLSGGERRRVEIARALAANPKFIL
                     LDEPFAGVDPISVIDIKKIIVNLKERGLGVLITDHNVRETLDVCERAYIVGSGEMIAS
                     GTPQQVLENPDVKRVYLGDQFKL"
     gene            30821..31333
                     /locus_tag="PXD18_000458"
     CDS             30821..31333
                     /locus_tag="PXD18_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDL6300922.1"
                     /translation="MTKLTEFLSPENVRQGVLISSKKRALELVGKIVAESINQTEQQS
                     EALCPIECFGNLFKREKLGTTGLNQGIALPHAKLPACGDIELTKPIAVFLQLEEAIDY
                     EAQDNKEVDLIYAMMFPENSCEQYKSCLPAIAQKLTDKSLLKQLRAAESAEDIWQILV
                     YADNHLKDEE"
     gene            31346..32209
                     /gene="rapZ"
                     /locus_tag="PXD18_000459"
     CDS             31346..32209
                     /gene="rapZ"
                     /locus_tag="PXD18_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HDL6300923.1"
                     /translation="MELIIISGRSGSGKSVALRALEDAGYYCVDNIPLPLIPTLTYYL
                     TQENRSAVISLDIRNLPNTPNAIEELLTQLEPLNAKLIFLDCERNTLIRRYSDSRRIH
                     PLSTQDDLSLEGALDLEQKLLEPLVQNANYIIDTSHLSSHELAENLRQILQGSTEKEL
                     KIIFQSFGFKYGLPADSDYVFDVRFLPNPHWNPELRPMTGLEQPVIDFLERQTEVHNF
                     IYQTRNYLEMWLPMLEQNNRSYLTIAIGCTGGKHRSIFIAEQLAKYFQAKGKNVQVRH
                     KSLEKHHKKTS"
     gene            32292..33476
                     /locus_tag="PXD18_000460"
     CDS             32292..33476
                     /locus_tag="PXD18_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HDL6300924.1"
                     /translation="MKSADIVIVGGGMVGLALAGLLKDVDCQIKIIEKNTPKFDADTI
                     YHRVSAINASSQKILEQIGAFQHIPAQRLSPYTEMKVWEKDSFANIHFDNNDNEIKQL
                     GLSQLGFILENAVIQHALWQQVSQQANVEYIIAAPQTLGVSENGAFLTLDNGEMLSAK
                     LVVGADGANSWVRNQMKMPLTSKDYQHTALVCNVKTTEKHGKTARQIFAEDSIFAFLP
                     MADEHLCSIVWSLPPNKANELKNASEAEFNKALTIAFDNQLGLCEVQSLREIYPLAAR
                     FCRDFAQPRIALIGDAAHTIHPLAGLGVNLGFADARTLANEIQKQLVNNQDIGEYRHL
                     RQFERERKAQAMKLLATMEGLKQLFDGNHPLKKLFRGIGLSLTNQLPFVKKQLIQQAI
                     YL"
     gene            33608..34192
                     /locus_tag="PXD18_000461"
     CDS             33608..34192
                     /locus_tag="PXD18_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein HlpB"
                     /protein_id="HDL6300925.1"
                     /translation="MNKLTKISATALVALFLAACDKPAEKAPATEPTKTTEAAPTTTA
                     PAAEAAKPAETAVAAPSEAAKADYQKLVDWNTAQESTMATAQAELQKKLATQDPKQIQ
                     EGLSAFNKKVEETVKSLDAIEVSDAQIKTFKEKTKSVLTLSSEVISEQVKTISTPNDQ
                     AALQAVQQKAQSLIEAGNELQKLNVELQQRFSAK"
     gene            34259..>34830
                     /locus_tag="PXD18_000462"
     CDS             34259..>34830
                     /locus_tag="PXD18_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein Hlp"
                     /protein_id="HDL6300926.1"
                     /translation="MNTLAKISLSVLFTLFLTACEQPNSTKTQSSAESPVQVKEESKE
                     EVKPADTGAQDYKMLREWQDTQEKALNDAIKAATETLTDKQKADSTLMQETVNNALLA
                     QIDHIKISAETLNIQNNEVKALKDKTLEVLTLGAQMIVEGAKMEKNPTPEAHKAFGEL
                     QTKLNQLAEEGQQLENILRAKYDPAPAPAPA"
BASE COUNT        10781 a         7131 c         6622 g        10296 t
ORIGIN      
        1 ttataaaaat gatttaataa gaattaaaaa ctaagataga atataaaaat ggttttaaat
       61 aaaattaaaa ataaattgta aatttttatt taccaagatt tttagcaaag ttttcactaa
      121 aaatgaccgc ttgcaggcaa taaaaaagtg cgtttccgca ctttttacta aaatgattta
      181 attactcaac caatgctcac cgttgccatt agctggtgga ttaatcggtt ggttattatt
      241 cttacctgga ataataattt gaggctgatc gtacatacat ttgttgttcg acaatatatc
      301 acagggaata gcacatacgg caggggcaga aagaagacaa cttgaaccac ctttttgatt
      361 acaattctct aatgcatttt cttcagcaag actactaacg ataccatacc caaaatcctc
      421 gaagccttga ccatctttat aaccttgtgc aaaagcaagg cacatattac taaacgataa
      481 gatcatttgg caattacgac caccgttctt ttcacactgt ttaaacgcat cttgcttcgc
      541 attttctaaa tttttagacg tattatcagt cacccacatc atattttgtt caggtgacat
      601 ataaattgat gaccataaac gaggctgtgt tttacgcttt gctaagtcct ctttactggc
      661 aatggttacc gcttctttat attcaccaca tttaaactct ttttcgacat caccaaaacc
      721 attcatttca cgaacagaag tgattttatt atcagcgtca gcaaaaagat atgtccaagt
      781 cgatccacct gtataaacct tatctgttgt cataaatata gtggttgcat tacgaccaac
      841 ttcataagtt tgcaaattat acaaagctag ttgaataacc ataaacatag cttaattcat
      901 tatcttttac gcattgaacc gctgtatcag gtaaacgttt acgtgcaaaa aattcagata
      961 catctttacc acgccaataa acactatcta gtggcttaat cattgtagaa caagcggtca
     1021 aaaataatga caaaataaca aatagcaaag aacttatttt gaaatttata ataattacct
     1081 caaaagaaaa aagagcaagc tttcacttgc tctttttatg ttacttagaa tagcgttgga
     1141 acactaaaca cgcattagta ccaccaaagc cgaagctgtt tgacatcacg gttgttaatg
     1201 ctttgtcttg gcgttcagtc acaatattca taccttgtgc ttgttcatca agggtttcaa
     1261 tattaatgct tggtgcaata aaattattat ctaacattaa taatgaataa attgcctcgt
     1321 gcgcacctgc tgcacctaat gagtgtccgg tcattgattt ggttgatgaa attgctggcg
     1381 ttttatcacc aaagacatta cggatcgccc ctaactcttt tacatcaccc actggagtag
     1441 aagtgccgtg tacgttaata tactcgattt caccatttac agttgccatc gcctgtctca
     1501 tacaacgctc agcaccttca ccacttggcg cgaccatatc gtaaccgtct gaggttgccc
     1561 catagcccac aatttcagca tagattttgg caccacgagc aagagcgtgt tctaactctt
     1621 ccaccacaac cactgcacca ccaccggcaa tcacaaaacc gtcacgatta gcatcataag
     1681 cacggctagc ttttgttggt gtttcattat atttagttga aacagcaccc attgcatcaa
     1741 actcggttgc acattcccaa gaaagttctt ctgcaccacc tgcaaacacc acatcttgtt
     1801 tacctaattg gattaactcc atcgcgtgtc caatacagtg tgctgaagtc gcacaagctg
     1861 agctgattga atagtttaca ccacgaattt tataaggtgt tgccaagcat gctgacacac
     1921 ttgatgccat tgttttggtt actgcgtaag gcccaacggc tttcacacca cgtgggccac
     1981 gtactgcatc acaagctaca agttgactgt gcgccgagcc tgtaccagct ccgatcacca
     2041 aaccggtacg atcgtttgaa acttgttctt cggttaagcc tgagtcttcg attgcttctt
     2101 tcattgaaag ataagcgtaa gccgcagcat ctcccataaa acgatagatt ttacggtcaa
     2161 ttaactcagc cggatttaat ttaatcgtac ctgccacttg gctacgcata cccacttcag
     2221 caaactcagg cacaaattca atgcctgatt tacctgcttt tagtgattcc aacacttctt
     2281 ctttgttgtt accgatactg gaaattacac ctaatcctgt aataacgact cttttcattt
     2341 tgtttccttc atcattttga tctgaaaaat acttgattca gcttacactt gttcactcaa
     2401 ataagctact aaaacttgat tattttacac aatttcatta ctggtctgaa ctctttctat
     2461 caagatagcg gttgaatttc agacattttt tgcaaaatag ggaatgaaat ttaatttccc
     2521 gattttttac cctattacat aataatcact tttccgctaa aatgctaaac agttcacact
     2581 ttagtaagga aagctgacgt gaaaacatta accctgacag ccaacaaaat aacagccgta
     2641 gaaggcgctg ccattggggc gaaccagggg agcttcgccc aaaaattaaa ctctactaaa
     2701 gcacgaattg atcaacttaa tgcataccga atagaacgag ctatcaatgc taataatcat
     2761 cattttatgc atgttttctc tctcattcca ttgcttattc atcttaatca ccctgtgtta
     2821 ccggcttatg ttgaaaatgc accacaaggg atttggcatt ttcaactctc tgattatcaa
     2881 aaacaatttc tggtttctta ccgttttgat gaagcaatct ctgccgatca tttgggcccc
     2941 catcccagct ttgatgctct ttattcgatg ggtagcaccg gtactattac ccaaacaagc
     3001 tgttctgatt tagatttatg gctatgctat ccgaaccatt ttacaattga acaatataag
     3061 ttaatggagc tcaaaattaa taaattgcaa gaatgggcaa agacattcca aatcgacatc
     3121 aatatttatt taatgaaccc agaacaattt aagagccaaa cttataacag tagcgtaacc
     3181 gatgaacaca gtggttcagc acagcatttt tttctattag atgaatttta tcgttcagct
     3241 attttacttg ccggtaagcg tttactctgg ttgcatttac ataaaaatga ataccaaaat
     3301 gttcacaata accctgaaat tgacttaacg gaatggattg atttcggcga tttttccagc
     3361 ctttcaacca gtgaattttt tggtgcaagc ttatggcagc tctacaaagg aattaataac
     3421 ccttataaat cggcaattaa aattttattg ctcgaatgct acgctcacac ttatcctaaa
     3481 acaaagctca tctccaaaga atttaagaaa aaactactaa gtgacaatgc tttggaatat
     3541 cactttgatc cctacttagc catgcttgaa ttggtaacag aacacttaag atcacgcaaa
     3601 gagtgggtga aattagaccg cttgcgagtc tgtttttatg caaaagcggt tgagggagaa
     3661 ataaataaca actggagaag tcgtgattta gacgagctgg ttaaccaatg gtcttggtca
     3721 gaaaaacaaa ttcaattact tcaaaaccgt caacattgga aaattaagca agtgatgaat
     3781 catgagaata tgctgattga tcatttacta caaagttatc gaaatttaat tcattttgct
     3841 cgaaaatttc atattaatcc gagcattatg acaaatgata ctgatatttt aatgcgaaaa
     3901 ctttattctg tatttgaagc acttccagga aaaatatctt taattaatca taaaatatcg
     3961 tccaatttag cagaaaaagc aattacattt attgaagcta aagttggatc tgcgttacaa
     4021 cccggttggt atttagttaa tcaggcacct aaaagtcgtt atgactctga aaatcgttat
     4081 gtccattata ataaaagccc gattaagctt attgcttggg ggtattttaa cggcattatt
     4141 aacgcagcaa ctaatttaca tactgttagc cctaatttag atatcgagaa attgcgacaa
     4201 tttatcaccg acttgcgctt atctttccca attcaagcgc cggaagtgac caatgatgac
     4261 atgcatcacc ctaatgaaat tcgcaatttg gttatagcgc ttaatttagt acaagatcca
     4321 accgaacata tcgatgaact accaaaaaaa gtttatccaa gcgatctgtt taattttggt
     4381 aaggcacaaa aaacgttagt tggtagtgtg agcattattt atcgaaatgt atggaatgaa
     4441 attcgaactc aacattttga cggtgaagat gctattttaa aagcactaaa attggtatcc
     4501 aatcgaattt atcaaggaaa ttcttcacct caatcagtta atgttttttg ctatagtaaa
     4561 tatctacgta gtgagttacg tgattttgtg gcagatttag ttcataaatg tattacaatt
     4621 cagactggtt gtttactgca agagaatgaa tttagcactt taaaagtagc aggaaaaacc
     4681 tggcagtttc tttttcataa aaaaacattt agcattaaac aaattgatga acaacaagcg
     4741 gttgaaaatt taaattcttt tgcaaaaacc aagcaaaatg ctaaaagcga aaatgaaaag
     4801 aaaaaagaat ttccgcagca aattagtgaa tttgccagtg aaggcttttt acagtttttc
     4861 tttgaagaca atgtcgataa tagttttaat gtatatgttg tagatgaacg taataatgtc
     4921 gaaagttact ataactgttt cggcaataaa gaagagaaaa tcaggaaaat caataaatta
     4981 caaaatgaaa aacaattaaa aacagaaaca ccagcatcat ttggaagctt taatcatcca
     5041 caattttatc aacttatttc accaaacggt gagttatgta ttgtgccgtt tcaaagccgc
     5101 cagcatttag attatttagc acaaaaacat cattaatctt atttatatta tacaggtggg
     5161 aattctatgt caggattagt tagtccggaa ttaattaaaa cagtcgcatt acttgcaacc
     5221 agcgtcacta ttgtaccgct atttaaacgc cttggtttag gaagcgtatt gggttattta
     5281 gtcgcaggat gtttaatcgg gccatcgggc attggattgt tccaagaccc tgccgctgtt
     5341 gtgcatatgg cagaacttgg cgtggttatg tttttgttta ttattggttt ggaaatgcac
     5401 ccggaactgc tttgggcgat gcgtaaagcc atcttcgggc gaggtttctt acaagttgcg
     5461 atttgcggta ctttattaac cttagccggc atttacttat taggtttttc caaagaagtg
     5521 gcatttattg ccggtatggg ttttacgcta tcttctactg ccattgtaat gcaagtgctg
     5581 gaagataaag ggataagttc cacgccaaaa gggcaacgta ttgttgcaac tttactattt
     5641 gaagatttag cgattgtgcc attattagcc tcggttgcct ttcttgctcc taaccaagta
     5701 gatgctgaat ccagtactaa ttggtctgct attggtctta gcctagttgc cgttcttatt
     5761 ttggttgcga gtggaaaatg gctgatgaac cctattttcc gtgttatttc taaagccaaa
     5821 gtacgagaaa tgatgactgc cgctgcctta cttgtggtat taggctccgc tcttttaatg
     5881 gaaatcagtg ggctttcaat ggcaatgggg gcattccttg ccggagtaat gctttcggag
     5941 tcttctttcc gccatcaact agaagctgat attgaaccct tccgtggttt acttttaggc
     6001 ttattcttta tgggcgtagg aatgtcatta gacctcagcc tcgtcctcaa taattggcta
     6061 tggttattgg tgattgtagc agtttatgtt atcggtaaag gccttggaat cttcattgct
     6121 gcctctatca cccgattaac actgaatgaa tctattgtgc gaactaccat tatggctcac
     6181 ggtggtgaat ttgcctttgt gctattctca gccgccgcaa ccgctgggat tttaacccca
     6241 gatactcacg ctaccttaac cgctgcggta attgtctcaa tgttgctttc cccacttctc
     6301 attttaatca agcaaggagt gagaaagaaa aaagcgaaaa atgaatccac taatatgaca
     6361 ggggttgaat taccggaaga tttagaagcc aatgtattag tcatcggttt tggacgcttt
     6421 aaccaaatag tctgccaagc cttattagcc aaaggactaa gtgtatcggt tattgattca
     6481 aatactgatc atattcgtgc tgctgctcgt tttggtttta aactttacta tggtgatgga
     6541 gcgagactag atgtacttag ggcatctggc atcgccaatg caaactgcgt aattgttggc
     6601 gtaggcaatc cggaaagaac ggagaaaatc gtagagctga ttaaatctga atacccctta
     6661 gtacctgtat ttgcgagaac ctatgataga caaagtgcgg ttgatttagt caaaaagcac
     6721 cacgttgatt atcacattcg agaaaccttt gaatcagccc tcgcattaag ccaagccgcc
     6781 attgaacgct taggttctag cgaggaagag gcaaaacaaa ttatcagcta tgttcgccga
     6841 ttagatgcag aacgctttaa tgaggaatta ttacacggtt tctccgcaga agttatccgc
     6901 aaatattggg taccaacacc ttgggtaaat ccacaacacg aaggtagtgc acttaatgaa
     6961 gaaacggctg atattttaga agagcttggt gagacagtag aagttataaa agtggatatc
     7021 actgataaaa attaaagaat ttatactttg aatccttatt caagtataag ccttcctata
     7081 catatcgcat aatcactcgt aaaaaagcac cctatcggca taatctgata gggtgttaat
     7141 ggtaataaac catcgcacga tgacaaggag aatatctatg aaaaaaacaa taaatcaatt
     7201 tgaacttaca ttttttaaga aaatttggcg tggagaagtc agccctaatt tttctgcctc
     7261 gttaaccaaa ttcatcgctt tattaatatc ttttgcttta atcgctttca ttaccgcctg
     7321 attaaaatag gcttccgtat ctttatctac tgctgttttt actgcaactg gattttcttt
     7381 tatcggcaac ggtatagccg ttttagctgc cggcgttgct gctttgtttg agctgaaaat
     7441 ttcagtcggt aatccaataa atttagtgcc gttcgagccg gtaacgttga tgtgaatttg
     7501 cccttttaaa ctgtgtgcta cttcaatatc gttaattgct ggtggttgtt taccggttgc
     7561 ttttgcatag gtttttgccg gatgcggcat catcgtggtt ttggctaaat cttgctgcgt
     7621 ggtataaatg agcaagtaaa tataatcttg gttcattgcc ggcgttaaat taagttctgc
     7681 ccctaaacgg ctacctttga gtcctcgctc ttccaataat ttaaactcag aagaggggta
     7741 agttgatgcc acattaaatt gactatccaa cacgactgcc gtgggtacaa aaacattttt
     7801 gtccatcacc gggctttcga tttcaatttc caatgtgcct tgatttgccg gaatacgata
     7861 agctgcaacc gggctggcaa taccggcaaa cgctgtggta aatgcttgtt tgtgttgctc
     7921 gcttagatct gtttttacgg tttgtgaaaa tggcacatct tgccattgaa tttgagctaa
     7981 ttcagccgag ttaatatgaa tagacttacc tgccgagcca tttgctatac tcggagacac
     8041 caccaaaaga tgggcgaaga atattgctgt cgaaagaagc gtttttttca tattaacccc
     8101 taaaaatcgt gaaataggat aaagtgctga aatagtgggt aggtaatcct acccacacaa
     8161 aggtttgatg attaccacca agcttcaaat tgaacaccgg tgataaactc gccgtctttg
     8221 gctttatagc cggcatcggt acgagctttc gtgttgaatt tatcattcca acgtgcataa
     8281 gtaccaaaca cacggattgc agggcgagcc caaatgctat taccagcctg ccattgttgt
     8341 gcaacggtgt attttaccaa gtcatttttc ttgcctgttg cttgatcttt aatgcgatca
     8401 taaccaactt ctaataatgt actcattgta tcattccatt tgtacattgg gcgaatacct
     8461 gctgagtacc aagttttacc ttgtttatta tctagttttg ttttttcgta gattaaggca
     8521 tacattactt caactttatc actcgcttgc actacccctt ggttgattaa acgaagcata
     8581 ttacctttat tatctgcttt cgaaccctgt gcgtgcccat tattccaaga agtcatagag
     8641 tcggttgcat attgtgcagt aaatttattg aaaccaccaa agaagttacc ttgagtgtat
     8701 tccgctgtta ccatataacc gtttttggtt gctccttttt caagggctgc acctttctta
     8761 gcatgtgcat taccgtaatc aaagcctaac tctaacgaac catctttcca aagctcaata
     8821 ccggctaacc gaacatcaaa aatatcgttg taaacatcgg ctttattacg ctgcttatct
     8881 aatttaattt tacctgtgct aggatctaat ttataaactg tagtatatcc aaaagtattc
     8941 gcccctccac gctctgtatc acgagtaacc gctaaagaga gttttccgaa gcctaaatca
     9001 atattttcaa cccctgcacc cggacctgaa atatcccagt aatagaagtc attcatatgt
     9061 acatcatggc gttggtaaaa acgtttacca gcccataagg tggcacctgg taaactatct
     9121 gcaaagtttt tgaactgtac atttaattca cgtagtgctg gacttgttgg tgtccaatca
     9181 ttattgtgaa gcgtaccgcc gtaagcaagg tttgtatcaa agtagataga tttctcacca
     9241 cttttgaata attcctgacc taatttcaat tctgcatagg tatcagattc gttacctaaa
     9301 cggtattttg aaccaccacc atttaccgtg aatgcggatt gctccccccc ccccgatgtc
     9361 caaccgatac ctgaacgtgc atatccgtgg aaatcaaccg ctgatgcact ggctgcgaac
     9421 attgcaccac tgattgcaac tgctaggact gtttttttca taatagaacc tctcttaaga
     9481 tttgatttta cttaggttaa ttattaattg attagaagat tgaaaatacc ctctaaaatc
     9541 agtaataaac tgaaattgtt ataccccttt ttcaacaaac aaacgtttgc aagctgtacc
     9601 gtcttcctta aataaatggc agcgttccgg caatataccg atattcagat cgtcgccttc
     9661 attaactaat accacatcgt tttgacgata aattaaggtt ggttgtttga tttcagggat
     9721 ttcaaggtgg atttgtgttt catttccgag caattccaca acttgcacaa taccgtgtaa
     9781 ggtcacttgg gtttgatccg aaggaactaa atgttccggg cggataccta aagataagtt
     9841 atctcccaca ttcacccctt cgccggaaac cggaatccaa aaattatgat gattcgcatc
     9901 aggtaactca atttttaccc gttccggctc taccgcaatc acttttaccg gtaaaaagtt
     9961 cattttaggc gagccgataa accctgctac aaagcgattt gccgggtaat gataaagttc
    10021 taacggttta cctacttgag caataccgcc ggcatttaat accacgattt tgtccgctaa
    10081 tgtcattgct tcaacttgat cgtgcgtaac ataaatcatt gtgcggttta gttttttatg
    10141 taatttggaa atttctaccc gcatttgtac acgcaatgcg gcatcaaggt tggaaagtgg
    10201 ttcatcgagt aaaaatactt ccggttggga aaccagtgtt ctaccaatag ccacccgttg
    10261 gcgttgtccg ccggaaagtg ctttaggttt tcgatctaat aaatgggcaa gctgtaagat
    10321 ttcggcaact tggttaactc gttgatcccg ctctgcttta cttacacctg ccagctttaa
    10381 gccaaaagac atattttcgg caacgtctaa atgtggatag agagcatagg attggaacac
    10441 cataccgata ccacgttttg aaggctctac ttcattcatc agttttccac cgatatagag
    10501 ttctcctgtc gtaatatctt ccaaacctgc tatcattcgt aatagcgtag atttgccaca
    10561 acctgacggt ccaacgaaaa caacgaattc tccttcgtta atttctaaat taatatcctt
    10621 agagatatga acatcaccat acgattttcc cacgttacgt aatgatacat tcgccataac
    10681 taaacctctt ttctgctttt gcttgttggt tttatttagg ctgaatagtc gcctttttat
    10741 ctaaagaaga aatcatccta aaatactttt ttttaggctg aatagtcgcc tttttatcta
    10801 aagaagaaat catcctaaaa tacttttttt tagggttaga gccatagcca taattattta
    10861 aaaaacgcca attcagaaaa attaaataaa ttttgtgatc aacctctcat ttttaatgcc
    10921 tatttttgtg aagcagatca caaaatgata aaaaatgtta cttagatcat acttttagct
    10981 tggggggcgt agagcaaagg gtgatctcaa atagattgta tagcccataa tttgccataa
    11041 tttaataaat gggttgtttc atatccgttt cttttattta acttcaagga gttttttatg
    11101 aaaaacaaat gtgtcaaatt caccttagct actcttgcta ccttagttct ttcaggaaca
    11161 gtaatggcaa aaatgacgga aggtaaactc gttatctgga ttaacggtga taaagggtac
    11221 aatgggcttg ccgaagtcgg taagaaattt gaaaaagata ccggtgttca agttttagtt
    11281 gaacacccgg atagacttga agaaaaattt gcacaggttg cctcaactgg tgacggtccg
    11341 gatattatgt tctgggctca cgaccgcttt ggtggttatg cacaatccgg tttattggct
    11401 gaagtgaatg taagcaaaga atttaaagat aaatttgtcg attttgcttg ggatgctgaa
    11461 acttacaacg gcaaaattat cggttatccg gttgcgattg aagcgatttc attaatttat
    11521 aataaagatt tagtgaaaga agcaccaaaa tcttgggaag aaattattga gttagataaa
    11581 aaactcaaaa aagagggcaa aaatgccatt atgtggaact tatccgagcc ctatttcacg
    11641 tggccgattg cggcttcaaa cggagcttat gcattcaaat ttgctaacgg caaatacgat
    11701 ccaaaagata ttggtgtgaa caatgaaggg gcagtaaaag cactacaatt tgtagtcgat
    11761 atggtgaaaa ataaacatat tagtgcggat atggactatg ccgttgccga agcctccttt
    11821 aataaaggac aaagtgcctt aaccatcaat ggtccttggt cttggggcaa tattgataaa
    11881 agcggtatta aatatggtgt aactttactc ccaacattaa acggtcaagc ttctaaacca
    11941 ttcgtagggg tgttaagtgc cggtgtaaac agctcaagcc caaataaaga tttagccaaa
    12001 gaattcttag agaattattt actcaccgac gacggtttag atgcagtcaa taaagataaa
    12061 cctttaggtg cggtggcgtt aaaatcttac caagagaaat tagcggctga tcctcgtatt
    12121 gctgcaacga tggcaaatgc gaaaaacggt gaaattatgc caaatattcc gcaaatgtct
    12181 tctttctggt atgccgaaaa atctgctatc aataatgcag tgaccggtcg tcaatcggtg
    12241 aaagaagcat tagatgatgc acattcacgc attcaaaaac aacaataatt cttcatcatt
    12301 ctgagtgggt tattatgacc cactctattt ttagattcac cctaaataca ataaaagtac
    12361 agtaaaagta ccgtaacaaa atgcagtaaa aattcgaggt gctgttatgc taactcaaac
    12421 tcaatccaaa tccactcatt ggctcaaata tctcttagcc ggattagtct tgctccttga
    12481 cttctatctt gttgtcttaa tgtactcaca aggtgaatat ctttttgcta ttttaacgct
    12541 gattattcta acttccggtg tctatatttt taccaataaa aatacctatg cttggcggta
    12601 tgtttaccct ggcattaccg gaatggcaat ttttattttg tttccgctgg ttgcgactat
    12661 tgcaattgcg tttaccaact atagtggttc taatcaatta tcctttgaac gagcggtatc
    12721 cgtcttaact gaacaacgct attttgccgg agataaatat caattcaccc tttatccgca
    12781 agcagataat aaatatcaaa ttgcattaac caatccgacg acagagcaaa cttttgtgtc
    12841 agagccgatt tcattggcta ccggaacgaa tgtggttgta accgagcaaa acagaccaac
    12901 tggcgaagtc gctcccctta aagtgattac gcaaaatcgg gccgcacttc aatcaatgaa
    12961 agtggtttta ccgaataata atgaactgac aatgagctca ttacgtcaat tctccgagca
    13021 aaaaccacgc tatcaatttg atgaagaaaa taaaatatta ctcaataatg agactggcaa
    13081 acgttatcaa gcaaatgacg aaaccggttt cttccaatcg attgatgaaa acggtcattg
    13141 gcaaagcgaa acacttgaac caggttatac tgtcacatca ggctttaata acttcattaa
    13201 aatttttacc gatgaaggta ttcaaaaacc ttttgtccaa atatttattt ggacggtgat
    13261 cttctcttta ttaaccgttg tctttaccgt tattctcggt atggttcttg cctgtttggt
    13321 acaatgggag gcattaaaag gtaaagcagt ctatcgtgtc ttattgattt taccttatgc
    13381 cgtaccatca tttatttcga ttctgatttt taaaggacta tttaaccaaa gttttggtga
    13441 gatcaatatg attttaaacc aactattcgg catcagccct gaatggttta acgatccgct
    13501 ccttgccaaa gtgatgatct taattgtcaa tacgtggtta ggttatcctt atatgatgat
    13561 tttatgtatg gggttactca aagctattcc ggctgattta tatgaagcct ccgcaatgga
    13621 cggtgcttcc acttggcaaa acttcagtaa aatcactttc ccattactgt taaaaccact
    13681 tactccgtta atgattgctt cgtttgcatt taactttaat aactttgtat taattcaact
    13741 attaacaaac ggtcgcccgg atatgattgg aacaaccact ccagccggtt ataccgattt
    13801 attagtcagc tacacctatc gtattgcctt tgaaggaagt ggtacgcaag atttcggctt
    13861 agcagccgcc atcgcaacca ttattttctt attagtcggt ggcttggcac tcttaaatat
    13921 caaagcaacc aaaatggaat tataaaagcg ggagggattt aacaatcccg accccaaact
    13981 aactttagga gttatatatg gcaattgttc aatctaaatc tgtgcgttat cgggtatggg
    14041 caacccattt catcttaatc tgtttccttg ccttaattat tttcccttta ttaatggtga
    14101 ttggcatttc gttacgaccg ggaaatctgg ctatcggtga tattattcca agccaaattt
    14161 cgtgggaaca ttggcaagcc gctcttggtt ttgatgttac acacgccgat ggtacagtca
    14221 caccgccgcc attcccggtg ctacgctggt tatggaactc catcaaagtg gcaacaatta
    14281 cctctatcgg cattgtaacc ttatctacga cctgtgctta tgcatttgcc cgaatgaaat
    14341 ttaaaggcaa aaaaaccatt ctacaaggta tgctgatttt ccaaatgttc ccggcagtgc
    14401 tttccttagt tgccttatat gcgttgtttg atcgtcttgg gcagtatgta ccgtttcttg
    14461 gtttaaacac acacggtggt gttatttttg cctacttagg cggaattgcc ttacacgttt
    14521 ggacaatcaa aggctacttt gaaacgattg atggttcatt ggaagaagcc gcttcccttg
    14581 atggtgcaac cccgtggcaa gcgttccgat taatcttatt accgctttca gtgccgattt
    14641 tggcggtagt tttcattctt tcatttattg ccgccattac cgaagtaccg gttgcctcac
    14701 tcctattgcg tgatgtaaac agctacaccc tagccgttgg tatgcaacaa tacctctatc
    14761 cgcaaaacta tttatggggt gacttcgcag cagcggcggt cttatccgca attccgatta
    14821 cgctggtctt cttattggca caacgctggt taatcggtgg tttaactgcc ggcggcgtga
    14881 aaggctagtt tgcaaaaaat tctctaaaaa cgaccgcttg tcgagctgat actgcggtcg
    14941 tcaatcttta ttagggctgt ctatgaaaaa tgcgttacct tatctctgct tattctatac
    15001 ctcaagcctt tttgcccaat cttggcaaca ttcccatttt tctgatttta acgatgatct
    15061 cgaaaaacat ttttttcaat cccaagttca attggaaaaa gggagctatc cgcttaggtt
    15121 caaatttggc gaacaatgtt atcaacccca acaagcgata aaattaaatc aatcggttgc
    15181 gttagtccct tgtataaatg aagctccaca actgcggttg tttcgtcaag gcaactatct
    15241 ggcacaaatt gatctgcgaa gcggcactcc gacacccaca atcagcgtag aacagcagct
    15301 acagcacaat gaagcgatgt ttcaaagttg cccgaattgg gataaaaaac cgattgaaat
    15361 tgatgtttct tccacttttg ccgaaggcga atcggttagc gatttttatt caggcaacac
    15421 cgctatcgtt aaaaacggca aagtcacctt aatgcccaat gaaaacgcaa gcggtctgat
    15481 tttgctggaa aaaagcaata ccgaaaatac ggcaacgttt gattggaaaa atgccaccgt
    15541 ctattttgtg ctgaccgacc gcttttataa cggcgatccg accaatgacc acagctacca
    15601 ccgccaaaaa gacggaatgc aagaaatcgg cacctttcac ggtggtgatt taaaaggatt
    15661 aaccgaaaag ctcgattacc tacaacaact tggggtaaac gtattgtgga ttagctctcc
    15721 gttagaacaa atgcacggct gggttggcgg cggtgataag ggggattttc cgcattatgg
    15781 ctatcacggt tactatcatt tagattggac gaaattagat gccaatatgg gtactgaaga
    15841 cgatttaagt cgctttgttc aacaagccca ccagcgtggt attcgggtgc tatttgatgt
    15901 ggtgatgaac cataccggct acgcgacgct tgccgatatg caggagttta actttggcgg
    15961 attttactta acaccggacg aaattagccg cacattaggc gaaaaatgga cacactggaa
    16021 gccgaaatca ggacaaaatt ggcacagttt caatgatttc attcgcttta acgataatca
    16081 ggcttggcaa aattggtggg gaaaagaatg ggttagagct gatattgccg attacgacag
    16141 ccctaaattt gatgatttaa aaatgtcgct cgctgccctt cctgatctaa aaaccgagag
    16201 cgaacaagcg gtcaaattac ctgaattttt tgcaaataaa aataccaatg ccaaaacatt
    16261 accaaacgcc aaagtgcgtg attatttaat tggttggtta tccgattggg tcagaaaata
    16321 tggcattgac ggttttcggg ttgataccgc caaacacgtt gaaaaatcca cgtggctggt
    16381 attaaaacaa tcggcacaac aagccttaaa cgaatggcaa aaagccaatc cgaacgccgg
    16441 ttttaacgat cgcttttgga tgacaggaga agcgtgggga cacggcgtgt tcaaaagtga
    16501 ctattatcaa aacggttttg atgcaatgat caatttcgat tttcaagatc aggctaaaca
    16561 agggttaaat tgctttgccc atattgagcc gatttatgcc gaaatgaatc gcaaattaag
    16621 cgacttcaat gtgttgagct atttatcttc acacgatact cgattatttt tccattcgga
    16681 tagtgaacaa aatatcgaaa aacacaaaac cgccgcaaat ttgctgttgc tttcacccgg
    16741 tgcagtgcaa atctattatg gtgatgaaag tgggcggaca tttggtgcga ccggttcaga
    16801 cctgatacaa ggcacccggt cggatatgaa ttggcaagag ttgcagcaag atcctcagaa
    16861 acaggcattg catcaacatt ggcaaaaatt gacacaattc cgccaacgcc atccggctat
    16921 tggcgcaggt gtccatcaac tcatcaaaaa tgatagctac tttgcattta agcgtgtgtt
    16981 gaatgaagat aaagtgatgg tggtttgggc cggaaattaa atctacttta gcttcaagtt
    17041 ttctctcttc tggggaaaac ttgaagccgg ttcggggaaa caagttgcaa aaaattacta
    17101 aaaatagacc gcttgttccc catgagcttg tgatcaatga taccccatca acatcagcag
    17161 ttctttcgta tagctgattg cttcgttacg attcgtcaca ccgattttct gataaagatt
    17221 tcggatatgg gttttaatcg tggttgcagc cacttgcaat tcatctgaaa tttgttcatt
    17281 gctatatccg gagtaaatca aacccaatac ttgccattcc cgctgagtga gcggactaat
    17341 ttttaagagt tccggcactt tcggattttt caataattga ttcacaaagt tttcatcaaa
    17401 atgggcaaat ttttggcgat aaaattgatt gatgttgcgt aaaataaact gtgctttgtg
    17461 caataccagt tcatctagca cattaagttg caataaatgg cggatctgct gtgccattac
    17521 atccccttca atcacaaacg cactgataaa attcgtttgg cgggtgagtt ttagtgcctg
    17581 aattaaatct tgctgagcca attctttctc gccttgtaaa aaataaagcc ggttacgaac
    17641 aattaatgcg cgatttaaat cgctaatcag agaaaatttt tcagccgttt caattaaatt
    17701 atctaaaatg gctttcgcct cgtgatattc ctcaagcaag attcgagacc gtgcaatatt
    17761 tcgccattgc acttgggtaa aatgattttt atctgaaacc ggtgaggggt tttgaattaa
    17821 ccagttcctc accgcagaaa cgtcattggt catctgccaa taaaatatac gtacctgatc
    17881 ggcgttggca atccaatcgt ggtgataaga atgagaatgt tctaattgtt cgacctcgcc
    17941 taataatcgg gcagtgttat ccaaattgcc tcgagccaac gagatcttcg tgagtaaagt
    18001 taagcattgt aacttatctt caaatttaga taaggcattc attccggcaa ctgccattga
    18061 ttcagcttta tctaagttat accattccca taaaatcttg cctttagaac gtagcaaaaa
    18121 ttcatacatc ggcacttttt gtagatggtt ttctttcaca aactcgcttg ctttatctaa
    18181 catttcatag gctgcttgtg aaaacccttg ggcaagcaaa atttcagatt gttgaagctg
    18241 tgaccacaaa atattgtggt aagtatgatg ctgacgtgcc atacgctctg ctttttgcaa
    18301 cattgctaat gcttctgcca gattgccgtg gcaatgatga gcttcgccaa taatagacgt
    18361 tgcaacaata tgagcataat aggcattttc tgaaagatcg tttaacgctt cagacgctaa
    18421 ttgaagtgcg gtattctcat caccggaatt gatagcaact tgtgcccgta gcacattaaa
    18481 ttccgcattg gcagttttgc tcaattcaat tttattttca gttaatgcac gagaaaaatc
    18541 cgctaaaata ccacctactt caatatggcg gtgctggctt tgtaccaacc aggctttgag
    18601 taacaccaaa ttagtatgtt cggttaaatg ggcgtaatct aagcaattta agctctcttc
    18661 caataatttg agttctcctt gatgaaacac cgtccaagcg tgtttgctca aaatattgag
    18721 tagtaatccg gtatccgata actgcattgc gtgatgtaag gcttctgtaa catagcctaa
    18781 ttgtaaccac gcattcgccg ccttttgatg cagttgcggt aattcagcat ataactcatt
    18841 ttggcaacat aaatttaaaa aggaagcaaa aagcggatgg aatttccacc agctatcatc
    18901 actactctgc cacttactgt ttgccatttg ttgtaaaaac aaaccttgct tttcgagaga
    18961 ctctaatttg gtgcgactgt tttgctcccc tgtaacagcc tgcactaaag actcattcat
    19021 tgaatgcaaa accgaacaac gcaaaataaa caaacgagtc tcttcatcga ctttattaag
    19081 cacttcatcg gctaaatatt cgttaatatg aaaatggttt gatttggcta aacgtttggc
    19141 aatatcttgc agtggtactt gtagcgtgtg tgatttattt tttgcaaaaa ggctaattag
    19201 ctgaagggct gtgggccacc cttcaacttc gttacacagt gcgataacat cttgctgatt
    19261 taactccgaa cctaatcttg cttgaaaaaa agcggtactt tcttggtgat caaacattaa
    19321 ctggttaata tcaatttcca ataattgttc ttgcactctt aaactggcaa tacttaacgg
    19381 gggaattgat cgagaaatca agataagcgt catattagac ggttgatgtt taatccaata
    19441 ttttaatgct tcgtgaattt catcattttc aataatatga taatcatcaa tagcaagata
    19501 aaaatgctct gaaaatgccg cggctttaat caataattga ttaaataaag ctaataaatt
    19561 agctttacga ttttcctcta acaatacgtc tatttcttca ttgattgctg aatgcaatgc
    19621 cgcactaaaa taagtggcaa aacgatctga attattatcg ccttcatcta acgcatacca
    19681 gccgatattc tttttatttt caatccattg ggaaaccaga gtggttttgc cataacctgc
    19741 cggtgcattt atcaatacga ccggataact gcaagatttg tctaattctt gaattaaacg
    19801 ttttcgagga atgctgtttt gtaatcgaaa agaacaaaca agttttgatg gtattaacat
    19861 aataaattca attttctctc ataacaaaat agggatgata tatccaccat ttgtgttctc
    19921 actacttcct tataatcata ccatacaaga tgattattgg gatgatttga ttttatttgg
    19981 attttacata atagcgacat tcatctttaa ccgggggttt cctatgacat ttaattctat
    20041 tgtagaaaaa tactgtcgct actttgatgt gacagatcca aaacacttta ccttacagca
    20101 gtggtatcaa gttgttgctg aaggttccct tgagctaatt tatagccagc ctgcaaccaa
    20161 accgacagaa tcacgccacg tgaactacct ctcaatggag ttcttaatcg gtcggttaac
    20221 cggcaataat ttaatgaatt taggttatta cgaacaaatt cgtgactatc ttaaacaata
    20281 tcaagttgaa ttagtagatg ttttagaaca agagcgtgat ccggcattgg gtaatggcgg
    20341 attaggtcgt cttgctgcct gctttttaga ttcgatggca actgtcggac aaaatgcaac
    20401 cggctatggg cttcattatc aatatggtct gtttaaacaa agcttcaaag agggaatgca
    20461 gaaagaagca gcggatactt gggctcgtga cagctacccg tggcatcgtt ttaatccgtc
    20521 taaaacccgc catatcgggt ttggtggaaa aatcaaacat atccaagccg atcaatatga
    20581 atggcagcct aaattgacca ttcaaggcaa agcctttgac ttgccgattg taggttataa
    20641 aaacaacatc attcaaccat tacgtttatg gcaagcagat agtgaccaat cttttgattt
    20701 tgatgccttt aatgagggta aatttttaag tgccgataaa acgattgtca atgcagccgc
    20761 actaactcaa gtgctgtatc caaacgacaa ccatcaagcc ggacaaaaat tacgcttaat
    20821 gcagcaatac ttccattgtg cctgctcggt tgccgatatt ttagatcgtc acattagcga
    20881 aggttattcg ttagaagatt tagcaaaacg ccaagttatt caactcaatg atacccatcc
    20941 aacgctcgct atacctgaat tgatgcgtgt actgttagat gaacatcaat tcacttggga
    21001 gcaggcttgg gatatttgca gcaatacctt tgcttacact aaccatacct tattacctga
    21061 agcacttgaa caatgggatc aacgcctatt taagcagcta ttacctcgcc attatcaaat
    21121 tgtggaaaaa atcaatgata ttttccacga caaagtacag gcagaatttg gtgatgatgc
    21181 aaaaatttgg gaaaaattag ccgtgctatt tgattaccgt gtgcgtatgg caaacctctg
    21241 cgttgtcacc tgcttccgtg taaacggcgt tgcggaaatt cactccgatc tcttagtgac
    21301 cgatctattc ccggaatacc acaaattatt cccaacaaaa ttctgcaatg ttactaacgg
    21361 catcacacct cgccgctgga ttcgacaagc taatccacaa ttaagtgatt tattggatcg
    21421 taccttaaaa caagattgga cacacaatct ggaattatta aaaggcgttg aacaatatgc
    21481 ggatgacacc ggtttccgtg aagaatatca acgcattaaa cgcaataaca aagtggtttt
    21541 agccaatgaa atccataaaa cattagggtt aaatgtcaat cctaatgcga tttttgatgt
    21601 gcaaattaag cgtttccacg aatataaacg ccaacatttg aatttgttaa acattattgc
    21661 gacctatcaa tcgctaaaag ctaacccgaa ccaagactac acaccacgtc tattcctatt
    21721 ctcgggcaaa gctgcaccgg gttattattt agcaaaaaat attattcacg ctattaataa
    21781 tgtggcagat attattaata acgacaagca ggtaaatgat cgactacaag tggcattctt
    21841 accggattat cgagtcagtc ttgcggaaaa aattattcca gcagctgatg tatcagaaca
    21901 gatttcaatg gcaggtaaag aagcctccgg taccggtaat atgaaattgg cactcaacgg
    21961 cgcattaacc ttaggtacgc tagacggtgc caatgttgaa attgctgata tggtcggtga
    22021 ggagaatgtc tttatcttcg gtcacaccgt agaaagcgtg agggaattat tagcaaaagg
    22081 ctaccaaccg aaagcctact ataaccaaga tccgattctg aaaaatgcgg ttgatttctt
    22141 agccacagga aaagcctcta acggagataa agaggcattc aagctgatgt tagatagcct
    22201 gttggaacga gatcctttct tagtctttgc cgactttgat agctatcgcc aagcacaaga
    22261 gaaaattggt gtagcctatt tagatcaaga aacttggctg cgtagtgcaa ttttaaatac
    22321 tgctcgtttg ggtgcattta gctcagaccg ctcaattaaa gattatcaac aacgtatttg
    22381 gttgaataga taataaattc gggcgacttc tacaataaag gaagtcgcct attttctgct
    22441 gtatttcata tgtatttata tatggagaga aatgatgaaa ataactgcca aacaatatta
    22501 tcgggctgga attatgccct attttttcga tgagcgtggt gtaaaaaaaa cagcatctga
    22561 aaaaataaaa cattcgttat tcaaagcctt taacggcaat actcaagcaa gagaaacacc
    22621 tatccctacg gtcaacattt tttaccagca ccaaccctgt tttttacctt ttcatttagc
    22681 ggataaaaaa catccgttaa ccggtacttg gcagctacaa ctagaaaatt caaaccaaat
    22741 tatttccggc aaaattaaag caaggggaat tacattacct caagatttgc ccttaggtta
    22801 tcaccaatta cagctaaaaa cggtagataa aacctttaat tgcaccatta ttatcgctcc
    22861 ggaacgctgc taccaaccac aagccgtcat tgaacaaaaa agattgtggg gaaccttcct
    22921 acaactatac accttaaaat cagcccacaa ctgggggatt ggcgattttg gcgatttaaa
    22981 agacttcatt caacagattg ccccttacca agcagatttt atcggcttga acccgattca
    23041 ctcacttttt ccggcaaacc cgaattctgc cagcccatac agtccatcct ctcgccgatg
    23101 gctgaatatt gcttacattg atatcaatca gctagcggaa tttcaacaaa gtgatgaagc
    23161 acaaacttgg tttcattctg ctgaaatcca acaacaatta tcagaattac gcactcagga
    23221 ttggttgaat tacgagcaaa tcattccgtt gaaattgaaa gggctacgct ttgctttcgc
    23281 aaaatttcag caaaatatga ccgcttgcgc tgcccctgct tttatcgaat ttgtacaaaa
    23341 aggtggtgaa agcttacaag ttcaagccac atttgatgcc cttcatcagc atctatcggc
    23401 acaatttgcc gaccaatggg gctgggattt ctgggagaaa gcctaccaag actaccactc
    23461 cgcagccgtg cagcaattta gagaaacgca taaaaccgac atagaatttt acctttggtt
    23521 acaattcgtt gccgatcaac agctagcaga atgtgatgct atctgccgtc agcaaaatat
    23581 gcgtattggt atgtatcgcg atctcgccgt tggcgtcagc ccgaatggtg cagaaacgtg
    23641 gaatgacaaa caactttatt gcttaaatgc ctctgtcggc gctccgcctg atgtattagg
    23701 tccgcaagga caaaactggg gcttaacccc aatgaatccg catgtattaa agcaacaagc
    23761 ctaccgtccg tttattgagt tagtcagagc taatatgagt cattgcggtg cattacgcct
    23821 tgaccatatt atgtctttac tccgtttatg gtggatcccc aaaggcgata gtgcggttaa
    23881 tggtgcttat attcgttatc cagttgatga tttaatcgca attttggcac ttgaaagcca
    23941 acgccaccaa tgcctaatta tcggtgaaga tttaggtact gtgccaaaag aaattgtgag
    24001 caagctcaaa aatgcgggga ttttatctta caaaattttc tattttgaat ttgatgaaca
    24061 agggaagagt cgagacttac agcattaccc ttaccaagca atgaccacat taagcaccca
    24121 cgatttaccg actatcaatg gttattggcg tggctatgat tttgaattag gcgaaaaatt
    24181 cggcgtctat cctaattcga atattttggc aatccttaag caagatcgag tcaatgccaa
    24241 agccaaaatc ttacaacgct tacaagaaca taacgtagag atcgcacctg aaattagcga
    24301 gcaacttaat tctccggtga ataccgcatt tattcactgt ttacaaacct atgttgcaaa
    24361 tgtaagcagc ggattattcg gcttccaacc cgaagactgg ttgggtatga ctgagccggt
    24421 taacattccg ggaaccagta cacaatatgc aaactggcga cgtcggctta gtgttaacct
    24481 cgaggagatc ttcacagata aagatattca agccttatta aaagaagtta atttaatccg
    24541 taaaaatcaa taaaagttag ataagaaaaa aggcgacttt ccgtcgcctt ttgggcttat
    24601 atgcttgatg tctatcttta tccacctgaa acccacaaca taatcgctag cacttgaggt
    24661 agcataatac gcaaaaacat tactagtggg taaacagttg cataggataa cgctgcagcg
    24721 ccatttccct ctttaatttc attggcaaaa gcaagcgctg gaggatcagt cattgagccg
    24781 gcaagtaatc cacaaatcgt taaatagttt actttgttat acattctggc aatcaatcct
    24841 gctatcatca atggaacaaa agtaataatc gccccatagc atatccactc aacgccctca
    24901 ctgcttaata gcgtttcgag aaatctaccg ccagatttta aaccaactac cgctaaaaac
    24961 agtacaatac cgatttcacg caatgcaaga ttggcacttg gtggcataaa ccagtagagt
    25021 ttactgaaac taccaattct tgcaagaata agagcaacca ccagtggtcc accagccaag
    25081 cccagcttta acgcaacagg gaaacccggt aaataaatcg gtacagaacc aagtaatact
    25141 cccaaaccga tcccgataaa tattggcaac atttggactt gttgcaactt tgagtgcgca
    25201 ttgccgataa tcgtcattac catttcaata tcagcttgcc gccctactaa attgagaaca
    25261 tcaccaaatt gtaacgtcat atcacctgtt ggtactaatt ctacaccggc tcgatttaaa
    25321 cgagaaatga caacatcgta tttgccttta agcattagct gacgaatttg tttcccgaag
    25381 actttttcat tcgtcactac agcacgttca gaacggtaaa tcgtgccttt ggttgagaca
    25441 gatacatcta ctgcctcacc taaaataatc tgcatttttc gtaatgagga ttcttcacct
    25501 actaagtgta aaatatctcc tatctgtaga atcgtatcta cacgtggaat agaaagctca
    25561 ttcccccgtt ttaagcgtga ataagctact tcgtgcaaat taaaatcagg aatttgtttc
    25621 aacgttaaac cgtgaatatt tggattagtc agacggacat ttaaggtact aagttgatct
    25681 ttacttctat tttgctgttt gttaaaagcc tctgcttccg cctcaatatt gattcgaaat
    25741 aaaatccgaa tcagccacat tgaaagtaga attccgataa tgccgaacgg gtaagcaatc
    25801 gcataactca ttcccataat ttcagttaca ctctcagcgc ttaactcagc caatacctgt
    25861 tgacctgctc ctaaagaagg ggtattggtt acagccccgg agaaaatgcc taaaatcaca
    25921 ggcaaaggaa cattgaagaa tttatgaata agaataacta aaataccgct aatcagtaca
    25981 atcagtaccg caaaaccatt gagttttaag ccagaatgtt ttagtgaggc aaagaatcca
    26041 ggtcctactt gaattccaat tgaataaaca aataaaatca gcccgaactc ttgaataaaa
    26101 tgaagcgtat gggcatcgag cttcacatcg aattgcgcca taaaatggga gacaaacagc
    26161 ccaccaaata acactccccc tatacctagc cccacgcctc tgattttaat atggccaatc
    26221 cataagccta gaacggccac taaagataat aaactgacag taagtgcaat ttcgctcatt
    26281 acagcctctc tttaatatga aatacctcaa aaatggtatc caattctacc aaatctcaaa
    26341 aacgaaaaat gagatctatg tcaaaaaaat aaaatattga tagtattact ccaagatgaa
    26401 cttcaaaaaa gttcctgaat ttaaaaaaaa ttctcgacaa tacttttttt tacagtaaat
    26461 taaacaatta tttaaataac ctaaggatca aacacaatgt tatcaaacga agtctttatt
    26521 tcgattatcg tgctgttaat cctaagcttg cttagaatta atgtagtaat cgcacttatt
    26581 atttctgccc ttacttgcgg tctaatcggt aatcttggtg tagaaggggc tggatttacc
    26641 gaagcattgg aaaaaacaat aaaaagtttt actggtggtt taggtggggg tgcggaaact
    26701 gctatgaact atgccgttct tggtgcgttt gccgtagctc tatcaaaatc aggcgtgacc
    26761 gatttattag cctataaagt gatcaaatcc tttggtcaca gcccgtcagg tcgctccgtt
    26821 acttggttta aatacattgt attatttgtg ttagtggcat ttgcaatgtc atctcaaaac
    26881 ctaattccaa ttcatattgc ctttattccg attttaattc caccgctatt aagcgtaatg
    26941 aataaattgc aaattgaccg ccgtgcggta gcttgtgctt taacctttgg tttaaccgcc
    27001 acttatatgt taattccggc aggtttcggt cagatcttta ttgaaagcat cttagttaaa
    27061 aatatcaacc aagcaggtga accgttccaa ttagtgacta ccacagcgga aatgaccaaa
    27121 gcgatgttaa ttcctgtttc cggtatgatt ttaggcttac tgtttgcatt ctttgtgtca
    27181 taccgtaaac cgcgtgtgta tattgaaaat atgcctgaac caaccgcaga tgatattgaa
    27241 gcccgtgttg caaacgttaa gcccttccat atcggcatta gtattgtggc gattatcgcg
    27301 acctgttcgg tgcaattagc aacaaattcg actattatcg gcggcttagt cggtctggtt
    27361 attttcgcct taggcggtgt atttagactg aaagagagta acgatgtctt ccaagctggc
    27421 ttacgtttaa tggcgatgat tggctttgtg atgattgccg cctccggttt tgccggcgtg
    27481 gtcaattcaa caggcggtgt gccggcattg gtagaaagcc tgcgtgatgt gatttcatca
    27541 aaagaaatgg cagcattgct aatgttagtc gttggcttat ttattacgat gggtatcggc
    27601 tcttcattct cgactgtgcc gatcattacc tcaatttatg tgccgctttg tatctcattt
    27661 ggcttctcgc cactggcgac aatggcgatt gtcggtgttg ctgctgcact cggtgatgca
    27721 ggttctccgg catcagattc cacacttggt ccaacctccg gcttgaatgc tgacggtaaa
    27781 cacgaccaca tttgggattc tgttgtacca acttttatcc actttaacat tccattatta
    27841 gtgttcggct ggattgcagc aatgacactt taagctataa tatgcaaaat ttttgctaaa
    27901 aatgaccgct tgtagccatt acaagcggtc tattttcttc tttattttgc aaaccacatt
    27961 aggatcacca atgaaattta tctcttttaa tatcaacgga ttacgagcca gaccacatca
    28021 gctcgaagcg attatcgaaa aacaccagcc cgatgtactc ggcttacaag aaatcaaagt
    28081 tgccgatgaa gattttcctt acgatttagt caatcactta ggctaccacg ttttccacca
    28141 cgggcagaaa ggtcattacg gcgtggcatt actgactaaa aaagagccta tagcggtgcg
    28201 taaaggcttc ccgacagatg tacttgatgc tcaaaaacga atgattatgg cggatatcga
    28261 gaccgatttc ggcgtgctaa ccgtattaaa cggctatttc ccacaggggg aaaatcgcag
    28321 ccacgaaacc aaattcccgg caaaacaaaa attctatgct gatttgcaga actacttgga
    28381 aagcgaatta aagccggaaa atccgattat tattatgggc gatatgaaca tcagcccgac
    28441 tgatttggat atcggcatcg gcgagccaaa ccgcaaacgc tggctgcgtg acggtaaatg
    28501 ttcattctta cccgaagagc gtgaatggct agatcgctta tacagctacg gcttggttga
    28561 tactttccgt gcaggcaacc cagacgtgaa cgataagttc tcttggtttg actaccgttc
    28621 aaaaggtttt gatgataatc gtggcttgcg tattgattta attcttgctt caaaatcact
    28681 tgctgagcgt tgcgtggaaa caggcattga tttagacatt cgagcaatgg aaaaaccgtc
    28741 tgaccactcc cctgtttggg caacctttaa ataaagttgc aaaaaaatct gagttttcaa
    28801 ccgcttgtca gtttttagcc ctacaagcgg ttattttttc tcactttttt gcacttttta
    28861 cgctgtacta tatccctatt caaatctgtg ctacaatcaa acactatttt tagattattt
    28921 ttggattatg aacaaacgtt taaccgttat tttactgatt attgttgccg tacttggtgg
    28981 ctggtattac agcttacaag agaaagagaa tacggggctt gatcagctta ttaaaaagga
    29041 aggacagcct gaatatgtgg ggaataaaat gtccaccacg gtctatgatc taaaaggaaa
    29101 cccacaatat ttcgctcaag ctactgaaat taaacgctat gagtctactg agcgtactga
    29161 gttttttaaa ccttttattg agctttttgc caaagagtcg acgcaaaaac agtggaaagt
    29221 cagtgccgat tatgcagaaa ttaccaaaga aaaaatgtta aatttaaaag gtaatatcaa
    29281 acttgttgca ttagatcctg catcacgttt gcaacaaatc actaccgata cgttaactgt
    29341 tgatttaaat acacaggata tttttaccga aagtacggtc aaatcgatag gttccggttt
    29401 tactacaacg ggggttggat taaaaggtaa cttaaaacaa caagttgcga ctttgcaaaa
    29461 agatgtaaaa tcttacattg aaccgaccat tattcaagaa actaaagaat aatttgcttg
    29521 gaacaaggaa taacaatgaa attaatgttt aaatctattt tagtgagcgt gttactgggt
    29581 agcagctttt ccgcttatgc tctaaaaggc gataccgatc agccgattaa tattgattca
    29641 ggtagccaat cgttagatat gactaacaat atcgtgacct ttagcgataa tgtcgttatc
    29701 actcaagggt cgattaaagt gaccgcagca aacgtcaaaa ttacccgtca agaaggtaaa
    29761 aaagaaacta ttgacgctac aggctcacct gtaacattcc aacaaacctt agataacggt
    29821 aaaccggtaa acggtaaagg caacagcgtt cattatgatt taaactctga atttttaacg
    29881 ctgattggca atgcggaact caaacaacaa ggtagcttta ttaaagccaa taaaattacc
    29941 tatgatgtga aaaaacaaca acttaaagct accagtggcg gtaaaacccg agtgaaaacc
    30001 gtgctaattc caaatgaact tcaagataac aagaaaaaat aaggttaaat gatatgtctg
    30061 tgctttatgc cgaacattta gcaaaaagct ataaacaacg ccaagtggta aaagacgtca
    30121 gcctgaatgt caaatcaggt gaaatcgtgg gcttgctcgg tccgaacggc gcaggtaaaa
    30181 ccaccacttt ctatatggtt gtgggtttgg ttcgccacga ccacggcaca attcgtattg
    30241 acgaccaaga tatcagcaca ctaccaatgc acgacagagc aaaacaaggg attggctatc
    30301 taccgcaaga agcatctatt ttccgccgtt taagtgtgta cgataactta atgtcggtat
    30361 tacaagtgcg taaaaatatc aatgataaac agcgtaaaga gcgtgccgaa gagctgatta
    30421 cagaattcca tattgagcat attcgcaata gtttaggtca atcactttca ggtggtgaac
    30481 gccgccgtgt ggaaattgcc cgagcattag cagcgaaccc gaaatttatt ctgttagatg
    30541 aaccttttgc tggggttgac ccaatctcgg taattgatat taaaaaaatt atcgtcaatt
    30601 taaaagagcg tggtttaggg gtattgatta ccgaccataa cgtacgtgaa actctagatg
    30661 tatgtgaaag agcctacatt gtcggtagcg gcgaaatgat tgccagcggc acaccacagc
    30721 aagtgcttga aaaccctgat gtaaaacgtg tttatttagg cgatcaattc aaactctaaa
    30781 aaatcccctc tttggggatt tcatctttag atgaaaaatt atgacaaaac taaccgaatt
    30841 tctaagccct gaaaatgttc gccaaggtgt actgatttca agtaaaaaac gagcgttaga
    30901 actcgtgggt aaaatcgtgg ctgaatcaat caaccaaacc gaacagcaat ctgaagcact
    30961 ctgccctatt gaatgctttg gcaatttatt taaacgtgaa aagttaggca caaccggctt
    31021 aaatcaaggc attgcacttc ctcatgcaaa attgcccgct tgcggtgata ttgagctgac
    31081 taaaccgatt gcggtctttt tacaactgga agaagcgatt gactacgaag cccaagacaa
    31141 caaagaagtg gatttaattt atgcaatgat gtttccggaa aatagctgcg aacagtataa
    31201 aagttgccta cctgcaattg cacagaaact taccgataaa tcgttattaa aacagctccg
    31261 agcagctgaa tccgcagaag atatttggca aattttggtg tatgctgata atcacctaaa
    31321 agatgaagaa taatactgag gaaatatgga attaatcatt ataagcggac gctcaggctc
    31381 tggtaaatcg gtagcattaa gagcattaga agatgcaggt tattactgcg tggataatat
    31441 ccctttacct ttaattccaa ccttaaccta ctaccttact caagaaaatc gttcggcagt
    31501 catcagctta gatattcgta atttaccgaa tacgcctaat gcgattgaag aattgcttac
    31561 ccagcttgag cctttaaatg ctaagctgat ttttttagat tgcgaacgca ataccttaat
    31621 ccgccgttat agcgattccc gccgaatcca cccgctttcc acccaagacg atctctcgtt
    31681 agaaggtgca ttggatttgg aacaaaaatt gcttgagcct ttggtgcaaa atgcaaatta
    31741 tattattgac accagtcatc tttcttcgca cgaattagcg gaaaatcttc gccaaatact
    31801 gcaaggctca accgaaaaag agcttaaaat tattttccaa tcattcggtt ttaaatacgg
    31861 cttacctgcc gattccgatt acgtttttga tgttcgcttt ttaccgaacc cacattggaa
    31921 tccggagctt cgcccaatga caggcttaga gcaaccggtg attgatttct tagaacgcca
    31981 aaccgaagtg cataatttta tttaccaaac ccgcaattat ttagaaatgt ggctgccgat
    32041 gttggaacaa aataaccgta gctacctaac tattgcgatt ggttgcactg gtggaaaaca
    32101 tcgttccata tttattgccg agcaactggc aaaatatttc caagcaaaag gcaaaaatgt
    32161 gcaagttcgg cataaaagtt tggaaaaaca ccataaaaaa acatcttaaa taagtagggg
    32221 ctggtcctgt gccagccctc atttcaacta ttttagggcg ggcacagggc accgccccta
    32281 catttgattt tatgaaatcc gcagatattg ttattgttgg cggcggtatg gttgggctgg
    32341 ctcttgccgg actgctcaaa gatgtcgatt gccaaattaa aattattgag aaaaacacgc
    32401 ccaaatttga tgccgatacg atttaccacc gtgtaagtgc gattaatgct tcaagccaaa
    32461 aaatactgga acagattggt gcttttcaac acattccggc tcaacgcctt tctccttaca
    32521 ccgaaatgaa agtgtgggaa aaagacagct ttgctaatat ccattttgat aataatgata
    32581 atgaaatcaa gcaattagga ctttcacaac ttggctttat tttggaaaat gcggtgattc
    32641 aacacgcatt gtggcaacag gtttctcaac aagctaatgt agaatatatt atcgccgccc
    32701 cccaaactct gggcgtgagc gaaaacgggg catttttaac cttagataac ggcgaaatgc
    32761 tgtctgctaa attggttgtc ggggcagacg gtgcaaattc gtgggtgcgt aaccagatga
    32821 aaatgccgct taccagtaaa gattatcaac ataccgcctt agtctgtaat gtcaaaacaa
    32881 ccgaaaagca cggcaaaacc gctcgtcaaa tctttgctga agatagcatt tttgcttttc
    32941 tgccaatggc agatgagcat ctctgctcga ttgtttggtc gctgccacca aacaaagcca
    33001 atgaattaaa aaatgcaagc gaagccgaat ttaataaagc cttaacgatt gccttcgata
    33061 atcagcttgg cttatgtgaa gtgcaaagtt tgcgtgaaat ttacccgctt gcagcacgct
    33121 tctgccgtga ctttgcccaa cctcgtattg cgttgattgg tgatgccgct cataccattc
    33181 acccattggc gggacttggt gtcaatttag gctttgccga tgccagaacg ctggcaaacg
    33241 aaatccaaaa acagttggta aacaaccaag atattggtga ataccgccat ttacgccaat
    33301 ttgaacgtga gcgtaaagcc caagcgatga aattattagc cacaatggaa ggattaaaac
    33361 agctatttga cggcaatcac ccgcttaaaa aattattcag aggaattggt ttaagcctaa
    33421 ccaaccagct gccttttgtg aaaaagcagc ttattcagca agctatttac ttataaaatg
    33481 taaatttttt cgaaataacg taaagatgaa cgattttatg aactaatacg gagattactt
    33541 gtctatttat tggtacaata accagccttt attggctttt atttttatat tcttgaggaa
    33601 ttttttaatg aacaaattaa caaaaatcag tgcaaccgct ttagtcgcat tattcttagc
    33661 agcttgtgat aaaccagcag aaaaagcacc ggcaacagaa cctacaaaaa caactgaagc
    33721 tgcaccaact acaacagctc ctgctgcaga agcagccaaa cctgctgaaa cagctgtagc
    33781 cgctccaagc gaagctgcaa aagcagatta ccaaaaatta gttgattgga atacggcaca
    33841 agaaagcaca atggcaacag cacaagcaga actacaaaag aaattagcta cacaagatcc
    33901 taaacaaatt caagaaggat taagtgcatt taataaaaaa gtagaagaaa ctgtaaaaag
    33961 cttagatgcg attgaagtat ctgatgcaca aatcaaaaca tttaaagaaa aaacaaaatc
    34021 agttttaaca ctttcaagtg aagtgatttc tgaacaagta aaaacgatct ctacaccaaa
    34081 tgaccaagca gcattacaag ccgtacaaca aaaagctcag tctttaattg aagctggtaa
    34141 tgagttacaa aaattaaacg tagaattaca gcaaagattc tcagctaaat aatttaccat
    34201 tcaatgaaaa gctagagtat tttgctctag cttttttttg caattactaa ggattactat
    34261 gaacacgctc gctaaaatta gcctatctgt attatttacc ctttttttaa ccgcttgcga
    34321 acaacctaat tctaccaaaa cacagagctc agcagaatcg ccagttcaag tgaaagaaga
    34381 gtcaaaagaa gaagttaaac ctgctgatac cggcgctcaa gattataaaa tgttacggga
    34441 atggcaagac actcaagaaa aagccttaaa tgatgcaatt aaagcggcaa cagaaacact
    34501 tactgacaaa caaaaagccg attctacctt aatgcaagag acagttaata acgcattatt
    34561 agctcaaatt gatcatatta agataagtgc tgaaaccctg aatattcaaa ataatgaagt
    34621 caaagcacta aaagacaaaa ccttagaagt cctgacttta ggggctcaga tgatcgtaga
    34681 aggtgctaaa atggagaaaa atcctacacc ggaagcacat aaagcatttg gcgagttaca
    34741 aacaaaattg aatcaattag ctgaagaagg gcaacagtta gaaaatatat taagagctaa
    34801 atatgatcca gctccagctc cagctccagc
//
LOCUS       DANLXD010000012        32916 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.012, whole genome shotgun sequence.
ACCESSION   DANLXD010000012 DANLXD010000000
VERSION     DANLXD010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 32916)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32916)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32916
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.012"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            205..1431
                     /locus_tag="PXD18_000463"
     CDS             205..1431
                     /locus_tag="PXD18_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
                     /protein_id="HDL6300927.1"
                     /translation="MAMPSQRFSLTWVLNLFGTAVGAGVLFLPINAGMGGFYPLIIMT
                     LLVGPMTYLAHRGLTRFVLSSKYKGSDITAVVREHFGEQAGKLITLLYFFAIFPILLI
                     YGVGITNTVSSFMENQLHIAPPSRAVLSFMLIAAMIGVMLLSEQVMLKITTCLVYPLV
                     LILLGLSIYLIPQWNTAALQQMPTTGDFLTTLWLTIPVLVFAFNHSPAISSFALSQQK
                     YYQDDKKAEIESAKVLRSTAFILVLFVMFFVFSCVLTLTPEELAQAKVQNISILSYLA
                     NKFDNPIISYFGPLVAFLAIGSSFFGHYLGAREGLEGLVNQMRKEPIDPSKFRKITAI
                     TFLIILWIVATINPSILGFIESLGGPIIAMILFIMPVYAVYKVPALARFKGEFGHLFV
                     LVMGCIAISAIVYGLL"
     gene            1488..2864
                     /locus_tag="PXD18_000464"
     CDS             1488..2864
                     /locus_tag="PXD18_000464"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000626422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HDL6300928.1"
                     /translation="MISVFDMFKVGIGPSSSHTAGPMKAAKEFVDELQNRKFLNKIDR
                     LRVDVYGSLSLTGRGHNTDIAIIMGLMGYLPHNVDIERIEQTIENLKQNKQLIIAESS
                     VEPKVIAFDFYEDMPFHRDFLPRHENGVKFSALSGEELLFQNTYYSIGGGFIVDEANF
                     EQVKNSDLSVPFPYQNAADLLAHCKNNGLPLSSLVWKNELALRSRVEISDYLAMIWNT
                     MEACIERGLNTEGLLPGPLKVVRRASGLRRMLEANSKFNTDPMQIIDWVNMFALAVNE
                     ENAAGGRVVTAPTNGACGIVPAVLAYYQKFIAQLNQDTIERYLLTTSVIGSLYKMNAS
                     ISGAEVGCQGEVGVACSMAAAGLTEIMGGSAEQVCMAAEIAMEHNLGLTCDPVGGQVQ
                     VPCIERNAIASVKAINASRMALRRTSSPQVSLDKVIETMYETGKDMNAKYRETSTGGL
                     AIKILPCD"
     gene            complement(2919..4508)
                     /gene="purH"
                     /locus_tag="PXD18_000465"
     CDS             complement(2919..4508)
                     /gene="purH"
                     /locus_tag="PXD18_000465"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005821463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HDL6300929.1"
                     /translation="MAIQQALLSVSDKKGIVEFARGLSARGVKLLSTGGTAKLLAEAG
                     LLVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGTDDEVMNQHGIERIDMVVVNLY
                     PFAQTVANPNCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVNNNDFDAILAEMDQHQ
                     NSLTLETRFNLAIKAFEHTAQYDSMIANYFGQKVPPYQGAEEEDLTQPSGQFPRTLNL
                     NFVRKQTMRYGENSHQNAAFYVENELKEASVSTAKQLQGKALSYNNIADTDAALECVK
                     EFSEPACVIVKHANPCGVALGKNILDAYNRAYQTDPTSAFGGIIAFNRELDGETAQTI
                     ADRQFVEVIIAPTVSASAKEVLATKKNVRVLECGEFSEAVKRLDFKRVNGGLLVQDAD
                     QGSVSIDDLKVVSERKPTEAELKDLLFCWKVAKYVKSNAIVYAKDGQTIGIGAGQMSR
                     VYSAKIAGIKAEDEGLQVVGCVMASDAFFPFRDGIDAAAKVGITCVIHPGGSMRDQEV
                     IDAANEHGMAVVLTGMRHFRH"
     gene            4680..4949
                     /locus_tag="PXD18_000466"
     CDS             4680..4949
                     /locus_tag="PXD18_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDL6300930.1"
                     /translation="MINHNLADFVFEYFTENNLKAGTLRYRYIKENVIDAYSTRVDDA
                     FQGKGIAGELYNALIAFAQEKGLKIKPSCSYIEVKMQRSHRDLIA"
     gene            complement(5036..6481)
                     /gene="dacB"
                     /locus_tag="PXD18_000467"
     CDS             complement(5036..6481)
                     /gene="dacB"
                     /locus_tag="PXD18_000467"
                     /EC_number="3.4.16.4"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HDL6300931.1"
                     /translation="MIFKNFTRAFLNKFILSTLLIPSITQAEINTEELLNTLPAGTSV
                     SFIAKNLDTNQIITQYQSDIFMLPASTQKVFTALAAKLTLNDDFRFQTALLTNGKVEN
                     GVLKGNLIARFSGDPELTSGQIYQLMSKLKQQGINKIEGDLILDPSVFASHDKASGWI
                     WNDLTMCFNAPPAAINVDHNCFYVTLNADQPIGEFAKVNVPSAYPVQVFSSAYIVEPK
                     EAPFCQLDVVVHDNNRYQIKGCMARQSQPFGLSFSVQDPTNYGANMLKAQLKSLKIAF
                     NGQVKEPLTAQNGTLLAEHYSEPLPVLLKKMMKKSDNQIADALFRTVANKQHNRPASF
                     QLGSYVIRQLLKTKANIDFKNSVVADGSGLSRHNQVSSRTMLETLEYIAQNEESLKLF
                     ETFPIAGVDGTISGRGSISTEPLAKNLIAKTGSLKGVYNLAGFMKNARGERIAFVQFI
                     NGYSTGELESKTKRAPLNTFENKFYMALFNE"
     gene            6578..7054
                     /gene="greA"
                     /locus_tag="PXD18_000468"
     CDS             6578..7054
                     /gene="greA"
                     /locus_tag="PXD18_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HDL6300932.1"
                     /translation="MKQIPMTVRGAEQLREELDFLKNVRRPQIIDAIAEAREHGDLKE
                     NAEYHAAREQQGFCEGRIQEIEGKLGNAQIIDVTKMANNGKVIFGATVQLVNADTDEE
                     VTYRIVGDDEANIKEGLISVNSPIARGLIGKEVDDSVSITTPGGKVEFDIVGVEYI"
     gene            complement(7110..7526)
                     /gene="ndk"
                     /locus_tag="PXD18_000469"
     CDS             complement(7110..7526)
                     /gene="ndk"
                     /locus_tag="PXD18_000469"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HDL6300933.1"
                     /translation="MIQQTLSIIKPDATRRNLIGKILAQLEENGLTIKALKKVHLTRE
                     QAEGFYAEHKGKDFFEPLVEFMTSGSIVVSVLEGENAISHYRALMGATNPDNREKGTI
                     RDLYALSMRENSVHGSDSEESAKREIAYFFVPSEIV"
     gene            complement(7536..9614)
                     /gene="metG"
                     /locus_tag="PXD18_000470"
     CDS             complement(7536..9614)
                     /gene="metG"
                     /locus_tag="PXD18_000470"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HDL6300934.1"
                     /translation="MANQKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGN
                     EVHFVCADDAHGTPIMLNADKLGITPEQLIEKAKADHEADFASFNISFDNYHSTHSEE
                     NRQITTDIYKTLKANGFIKSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCE
                     VCASTYSPMDLINPRSAVSGATPVVKESEHFFFDLPSFEGMLKEWTRSGSLQPEIANK
                     MQEWFESGLQQWDISRDAPYFGFEIPDAENKFFYVWLDAPIGYIASFKNLCDRAGIDF
                     DEFWQKDSTTELYHFIGKDIVYFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSK
                     SRGTFIQANTYLKHLDPECLRYYYAAKLNDRIEDLDFNLDDFVQRVNSDIVNKLVNLA
                     SRNASFIAKRFEGKLAEKLDDEALFNEFTAQAETIANFYENREFNKAIRAIMELTDKA
                     NKYIDDKAPWVIAKEEGKEAELQAVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQSE
                     LRWDNIATPLFGHTVAPFKSLFSRLEKKQIDAVIDETKALFAEANKKTENQTKGTQKV
                     EQQAVEKQENIAVEPISPEITIDDFAKLDLRAAKVLNCEAVPKSDKMLRFELDLGDHQ
                     RQVFSGIKAAYPNPEALIGRFVIVIANLAPRKMSFGMSEGMILSAGTGGANLFLLDAD
                     SGVQPGMQVK"
     gene            9826..10797
                     /gene="menC"
                     /locus_tag="PXD18_000471"
     CDS             9826..10797
                     /gene="menC"
                     /locus_tag="PXD18_000471"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HDL6300935.1"
                     /translation="MRQVKLYRYQLPIQTGVVLRKQPLKERQGVLVCLQEQEKVGWGE
                     IAPLPSFSQESLEQAENQAVNWLKAWQKGEPETLEQLFPSVAFGLSCALAELNNELGE
                     QANNQSAVLCYGDLEKLHTAFSQHTNPIGKIKIGLNPEQEGEQANLLLHTFPNLRLRL
                     DANRLWSLEQAVKFAEKIANEHKPRIQFIEEPCQALELSRQFATQTDIAIAWDETVRE
                     ANFLVKKEPNLTAIIIKPTLVGSLEKCVNLIQQAQKQGLVAVISSSLESSLGLTQLAR
                     IAQQYTPNSVPGLDTLNLMQHQLLRDWHDSSLPLVGLESEFVREVVV"
     gene            11042..11743
                     /gene="rsuA"
                     /locus_tag="PXD18_000472"
     CDS             11042..11743
                     /gene="rsuA"
                     /locus_tag="PXD18_000472"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase RsuA"
                     /protein_id="HDL6300936.1"
                     /translation="MRLDKFIAENTGLTRSQAAKVLKSGVVTVNGNIEKSGAAKISQE
                     DEIYYEDQKLEWVEEGQYFMLYKPQGYICSHDDGEYPTVFQFFDYPLMTKLHTAGRLD
                     VDTTGLVLLTDDGKWSHRITSPKHHCEKTYLVTLADPVEDFYAQRLAEGILLRGEKEP
                     TLPAQLEILDDYNVNLTISEGRYHQVKRMFAALGNKVEALHRWRIGDVVLDERLEEGE
                     FRSLTSEEIASFNGK"
     gene            11733..12914
                     /locus_tag="PXD18_000473"
     CDS             11733..12914
                     /locus_tag="PXD18_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family multidrug efflux MFS
                     transporter"
                     /protein_id="HDL6300937.1"
                     /translation="MESRRPSLSFFIILGMMAMLPPLAIDMYLPSFLDIARDLAVSQE
                     KVQTTLAVFTLGFGAGQLFWGPMADSFGRKIIILIGLVGSAIAAYFLTQVQNIETFYL
                     LRLVQGLCAAAPAVVLGALVRDLFERNLFAKLMSVIMIISMLAPLLAPIVGGYIAKYF
                     HWHSIFYVLVAMGILCVVLISWKIPETLAPEKRLPLSFGKTLSNFAILLKHRPTLGYV
                     LIGGLTFAGIFCFLTSGSIVYIGLYGVSQENFGYFFGLNMIVMVTMTAINSKMVVKVG
                     SETMLRIALAMQLLAGIWLALVAIFDLGFWAMAIGIPLYIGMLSTIGSNASAAILEQF
                     PQMAGTANGVAGTARFGVASLVGAGLSHIAVTSAAPMLLAMALCVMLAGVVYYFLCYK
                     R"
     gene            complement(13054..14373)
                     /gene="rlmD"
                     /locus_tag="PXD18_000474"
     CDS             complement(13054..14373)
                     /gene="rlmD"
                     /locus_tag="PXD18_000474"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HDL6300938.1"
                     /translation="MAIFYSEKSAKKPIKSPACQKATIQSLDYQGLGIAKINGKTWFI
                     ENALPDEQVEFKVLEEKRQYGRGQAVKILKKSANRRMPSCELYGQCGGCQMQHISLEL
                     QRKAKQQALFQRLQKLQTHAIDVQPMIIGNDKHYRRRAKLSIAIQQGKAVIGFRLQNS
                     NQIIPLAHCEVLVEPLANLLPKLKHLIENWQQPKKLGHIELVSADNTIALFFRHLGAL
                     SAQDNHNLRQFATQEQLSLFVMTSENHIEHLCGERPYYQIQGLKLHFSIRDFIQVNAT
                     LNEKMVEKALEWLELSNQDRVLDLFCGMGNFTLPIAERAKSVVGVEGVEPMVQQAREN
                     AVTSGLKNVEFYQTNLDEPFSDKPWAKEPFNKVLLDPARNGALFCLDHLTSLNPERIV
                     YVSCNPATLVRDAEKLLQLGYRLEKAAMIDMFPHTGHLESISLFLKS"
     gene            14458..15783
                     /locus_tag="PXD18_000475"
     CDS             14458..15783
                     /locus_tag="PXD18_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase
                     family protein"
                     /protein_id="HDL6300939.1"
                     /translation="MISSVWNERYLADKKREQDHRSPFQRDRARLLHSEAFRCLQAKT
                     QIHAVGEDDFYRTRLTHSLEVAQIGSSLREKLLADVEGFQAVCSEQEFAKNMANLTAL
                     LPDHSLVESLCFAHDLGHPPFGHGGEMALNYKMYAFGGFEGNAQSFRIMTQLEPYTET
                     AGMNLTRRTLLGVMKYPALLSQTSPIEPAEMSEARHINLHHFPQSKGIFDDNNHFFEW
                     VLAPLSEKDRRQFCTVQPNQDPKQPNKTQYKSLDCSIMELADDIAYGVHDLEDAIVGG
                     MVTPQSWQNAEKLLAECQSDWVKQRLPEIREKLFSQHRYERKDVIGALVNHFITNVRW
                     KALPEFDEPLLRYNAYLPESVACVLKILKDFVYQYVICDAKTQRVERKGQRILMELFD
                     ILSSDPMRLLPNNVRERWKNAEESKRARVICDYLAGMSDGQAFKLFESL"
     gene            15904..16203
                     /locus_tag="PXD18_000476"
     CDS             15904..16203
                     /locus_tag="PXD18_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6300940.1"
                     /translation="MRFLPSEIYQPRGELVKADRQGNGEFEVEYRVSGNDVRGLAKSA
                     IAHAKRKGFHLVESDIHRDDADLKFKRGDQELDIEIEVKGRNRIEYKADLDLDKN"
     gene            16364..19276
                     /gene="rapA"
                     /locus_tag="PXD18_000477"
     CDS             16364..19276
                     /gene="rapA"
                     /locus_tag="PXD18_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-associated protein RapA"
                     /protein_id="HDL6300941.1"
                     /translation="MFLVGQRWLSESENNLGLGIVTSVDHRTVTINFPAAEEERVYAI
                     AVAPLTRVQFQAGDRINSIDGWQLEVSEVVENQGAVIYLGKRVDNGEEAVLPEMLLDH
                     KISFSKPQDRLFSAQIDRSDRFALRFNALQHQQAQYQSPLRGLRGIRASLIPHQLHIA
                     KEVGQRLAPRVLLADEVGLGKTIEAGMILQQQLFSGRAERVLVLVPESLQHQWLVEML
                     RRFNLKFSLFDEERCSDFDKQDENGDDVSENPFESEALVITSLNWLETSPQRANQVLA
                     ADWDLLIVDEAHHLEWSETESSIGYQLVERLSQQIPAVLLLTATPEQLGQESHFARLA
                     LLDSDRFYDYAEFVQEQAQYKPVADAVSSLLSDKPLSNDEQNAIAELLSEQDTEPMFR
                     AINSKKSDENDRLQARQELISELIDRHGTSRVLFRNTRQGVKGFPHREYHQISLEMPK
                     QYQNALKVMGMMGSVSQSDLLYPEYLFQRMNPNAKWAEFDPRIDWLITFLKNHRDEKV
                     LVICKQADTAIALEQVLREREAIRSAVFHEKMSIVERDKAAAYFAQQEEGAQVLISSS
                     IGSEGRNFQFAKDLVLFNLPDNPDLLEQSIGRLDRIGQKNDIQIYVPCFNLSAQQMLA
                     EWYHKGLNAFEETCPMGTAIFRELGEELQQFLQKPELSAQFDDFVAKTYKRQQYLKAE
                     LEKGQDRLLELNSNGGEAAQQLANDIAKEDNNPQLVNFALSLFDVIGVEQEDLGEQSI
                     VISPTGHMLVPDFPGLSEDGTTITFNRELALMREEVEFLTWDHPMIRNGIDLITSGDI
                     GKSAISLLVNNKLPAGTLLLEALYVVEAQAPKGLNLTRFLPPTPIRVLVDNKGNNIAP
                     QVSFAGLERQLKPVNKQMANKIAKMARADIEKLIKASEKAVEPQVQQVIETAKFEANS
                     KLKAELHRLESLKMVNKNIRADEVEALEQQLNASLAQLETANYRLDSLRVIVSNKA"
     gene            19403..19699
                     /locus_tag="PXD18_000478"
     CDS             19403..19699
                     /locus_tag="PXD18_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HDL6300942.1"
                     /translation="MYIDLQYAVPLLFEYDPNKSQINLAKYGIDFEQAKLLWEDERKV
                     VLEACIEPELRYFLIGKIYDKYWTAFFTPRNDVIRLISVRRSRKKEISYYEKYH"
     gene            19683..19925
                     /locus_tag="PXD18_000479"
     CDS             19683..19925
                     /locus_tag="PXD18_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HDL6300943.1"
                     /translation="MRNTISAEELERIFDEGKEDILQYCDLSTAHRPGQMKRVNVDFP
                     NWMVEALDKQARHLGVPRQALIKMWIAEKLPVQSPR"
     gene            19937..20605
                     /gene="rluA"
                     /locus_tag="PXD18_000480"
     CDS             19937..20605
                     /gene="rluA"
                     /locus_tag="PXD18_000480"
                     /EC_number="5.4.99.28"
                     /EC_number="5.4.99.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA pseudouridine(32) synthase/23S
                     rRNA pseudouridine(746) synthase RluA"
                     /protein_id="HDL6300944.1"
                     /translation="MALIEYNPPLEPFLDEVYRDNHILVINKPSGLLSVPGNRPEYYD
                     SAMTRVQQKYGFTEPAHRLDMATSGILLFALSKAAEKELKRQFREREPKKHYIALLWG
                     KLGEKVGDKGEMNFPLICDWENRPRQKICYERGKKAITHYEVLAHYPNNIARVKLTPI
                     TGRSHQLRVHSLALGHPIIGDKFYANPLAKSLSPRLCLHAESLTITHPITRELMTFTA
                     EPTF"
     gene            complement(20583..21158)
                     /gene="ampD"
                     /locus_tag="PXD18_000481"
     CDS             complement(20583..21158)
                     /gene="ampD"
                     /locus_tag="PXD18_000481"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HDL6300945.1"
                     /translation="MPNLKIEQGCLTGQKQVPSPHFSQRPDQEDISLLVIHYISLPPE
                     EFGGNFIDLFFQGKLEPTAHPYFEEIKDLRVSAHCLINREGEITQYVNFNDIAWHAGV
                     SCFEGREKCNEYSIGIELEGSNNQPFTQAQYQSLANLTKAIQQSYPQITDERITGHCH
                     IAPERKIDPGQYFDWAYYKHLLNEAKKSAQQ"
     gene            21218..22060
                     /locus_tag="PXD18_000482"
     CDS             21218..22060
                     /locus_tag="PXD18_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HDL6300946.1"
                     /translation="MLSYRHSFHAGNHADVLKHIVQLLILRALKEKEKGFLYLDTHSG
                     VGRYSLLSFESEKTGEYLEGVARLWERDDLPEEVAFYIDELKKLNRGGKLKYYAGSPL
                     LAVQQLREQDRAILTELHPNDFPLLRQEFAKAKNVQTKRENGFQQLKSALPPKERRGF
                     VLIDPPYELKEDYELVVKAIEEGYKRFATGVYAIWYPVVLRQHTKRIVRGLMDTGIRK
                     ILQIELAVRPDSDQRGMTASGMIVINPPWQLETQMKKILPYLTEVLVPEGTGSWKVEW
                     ITPE"
     gene            22183..22824
                     /gene="pyrE"
                     /locus_tag="PXD18_000483"
     CDS             22183..22824
                     /gene="pyrE"
                     /locus_tag="PXD18_000483"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HDL6300947.1"
                     /translation="MQQYKHDFIEFALSRNVLKFGEFTLKSGRISPYFFNAGLFNTGR
                     DLAKLGEYYAKAIQASGIEYDVLFGPAYKGIPIATTVAVALANLFDVDKPCCFNRKEA
                     KDHGEGGNLIGSPLTGKILLVDDVITAGTAIRESMEIINANNAQLAGVLIALNRKEKG
                     KGELSAIQEVERDYGCQVFSIVDFDDLVAFIETSPQYAPYLPKMREYREKYGV"
     gene            22998..24087
                     /locus_tag="PXD18_000484"
                     /pseudo
     CDS             22998..24087
                     /locus_tag="PXD18_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607068.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
     gene            complement(24152..25342)
                     /gene="metC"
                     /locus_tag="PXD18_000485"
     CDS             complement(24152..25342)
                     /gene="metC"
                     /locus_tag="PXD18_000485"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HDL6300948.1"
                     /translation="MSNYKNLSTKLVHTGRKKRNTQGAVNPVIQRASSLVFETLEEKK
                     HATQNRYKGALFYGRRGTLTHFSLQEAMCELEGGAGCYLYPCGAAAVTNAILAFVEQG
                     NHVLMTGAAYEPTQEFCNALLKRMGVSTTYYDPMIGEGLKALVQPNTKVLFLESPSSL
                     TMEVPDIPTLVRVAREINPEIVIMIDNTWSAGVLFPALEYGIDISIQAGTKYLVGHSD
                     VMIGTAVSNARCWDKLREGSYLMGQMVDADSAYITARGLRTLGIRLKQHEQSSIAVAN
                     WLAQRPEVKAVYHPALESCPGHEFFKRDFLGSSGLFSFELCEKLSNDKLANFLEHFEL
                     FSMAYSWGGFESLILANQPEEIAKIRPAIERKLTGTLIRIHVGLEAVEDLIADLEQGF
                     NRIR"
     gene            complement(25401..25940)
                     /gene="dsbB"
                     /locus_tag="PXD18_000486"
     CDS             complement(25401..25940)
                     /gene="dsbB"
                     /locus_tag="PXD18_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbB"
                     /protein_id="HDL6300949.1"
                     /translation="MLYFFKNLSQSRSAWFLLMLSCLILEGTALYFQHGMGLVPCVMC
                     IYERVALFGILFAGILGFLGNRYAIIRYLAILIWLGSAFKGLVLSIKHHDYQVNPSPW
                     NQCEFKVNFPQTLPLDQWLPQVFAPGPVNCSQSQWEMFGFSMAQWLIFTFAVYLIVAV
                     IVLISQFKRSRQRNNFMFR"
     gene            complement(26003..27544)
                     /gene="nhaB"
                     /locus_tag="PXD18_000487"
     CDS             complement(26003..27544)
                     /gene="nhaB"
                     /locus_tag="PXD18_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton antiporter NhaB"
                     /protein_id="HDL6300950.1"
                     /translation="MSSIDALFKSFLGKSPEWYKLCILAFLIINPLIYFFINPFVAGW
                     FLVAEFIFTLSMALKCYPLQPGGLLAIEAVVIGMTNPHHIKEEIMANFDVILLLMFMV
                     AGIYFMKQLLLYIFTKLLVAIHSKKILSLSFCLSAAFLSAFLDALTVIAVIISVGTGF
                     YGVYHKVASGNNFEDSTDITNDEKIISNKEILEQFRGFLRSLLMHAGIGSALGGVMTM
                     VGEPQNLIIASQAEWGFIEFLLRALPVSLPVLICGIATCFLVEKYKLFGYGDRLPSKV
                     WVVLARYSQLKEQKMTKQDRLKMLVQAIAGIWLIIGLALHLADVGIIGLTIIIICTAF
                     CGITDEHTLGKAFQESMPFTALLIVFFSVVAVIIDLKLFEPIIAFVLSAEPHSQLSLF
                     YIFNGLLSMISDNVFVGTVYINEAKTALDAGIIDREQFDLIAVAINTGTNLPSVATPN
                     GQAAFLFLLTSSFAPLIKLSYGRMVYMALPYTIVLSIVGFLGLEFLLPSMTEVMINWG
                     WFITR"
     gene            27701..28426
                     /gene="fadR"
                     /locus_tag="PXD18_000488"
     CDS             27701..28426
                     /gene="fadR"
                     /locus_tag="PXD18_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid metabolism transcriptional regulator
                     FadR"
                     /protein_id="HDL6300951.1"
                     /translation="MGHSDILKAQSPAALAEEYIVKSIWNNHFPAGSDLPAERELAER
                     IGVTRTTLREVLQRLAREGWLSIQHGKPTRVNDIWETSGPNIIGTIIKLDKSYLPVVI
                     ANVVSLRTRMAEAYIPEAIYLAPEESAKLFDGLDELENTAAAYAEFDYKLFRQFTFLA
                     NKPVYALILNSFKSMYHQVAKIFFADENNRQLTLSFYRSLLCTCLAKDSEKAAACMAK
                     NRQSSGEIWQKLSANIPESFGQL"
     gene            28441..29511
                     /locus_tag="PXD18_000489"
     CDS             28441..29511
                     /locus_tag="PXD18_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HDL6300952.1"
                     /translation="MNEIIFSLEPQDNARLQSLCGAFDEHLALIEKSFNLIIARTGFN
                     FTIQSEDDNHYSATLVQNSVKLIKQLYNETAPIKGKIKELDLEDIHLAIQESRMLLQN
                     QWQAGSQGEIAIKTKRGVIKPRSEHQQAYLRNILSHDISFGIGPAGTGKTFLAVAAAV
                     ESLERQEIRRILLTRPAVEAGEKLGFLPGDLGQKIEPYLRPLYDALFEMLGFEKAQKL
                     MERGVIEIAPLAYMRGRTLNDAFIILDESQNTTTEQMKMFLTRIGFNSKAVITGDITQ
                     VDLPRSQKSGLKHAMEVLKEVPELSFNFFDSKDIVRHPVVAKIVQAYDAWEAVDEERK
                     EQRKLEKLALEQEKILAQAEML"
     gene            complement(29637..31643)
                     /gene="tkt"
                     /locus_tag="PXD18_000490"
     CDS             complement(29637..31643)
                     /gene="tkt"
                     /locus_tag="PXD18_000490"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDL6300953.1"
                     /translation="MTERKVLANAIRFLSMDAVQKANSGHPGAPMGMADIAEVLWRDF
                     LKHNPTNPKWADRDRFVLSNGHGSMLIYSLLHLTGYDLSIEDLKQFRQLHSKTPGHPE
                     YGYAPGVETTTGPLGQGITNAVGIAIAEKTLAAQFNREGHKIVDHYTYAFLGDGCLME
                     GISHEACSLAGTLGLGKLIAFYDDNNISIDGHVDGWFTDDTAQRFESYGWQVIRNVDG
                     HNPEQIKFAIENAQAETERPTLIICKTIIGYGSPNKSNSHDCHGAPLGDAEIQAAREF
                     LGWEHAPFVIPAEIYTEWDAKAKGTLAEKDWNAKFAAYEAAYPELAAEFKRRYAGELP
                     ANWEAESKAFIEKLQANPATIASRKASQNAIEAYAPILPEFLGGSADLASSNLTLWSG
                     SKPIRAEHNVDGNYINYGVREFGMSAIMNGIALHGGFIPYGATFLMFYEYAHNAVRMA
                     ALMKQRALFVYTHDSIGLGEDGPTHQPVEQTASLRQIPNLETWRPADQVESAVAWKAA
                     VERKDGPTALIFTRQNLAQQQRTAEQLANISRGGYILRECCEKGSCPDLILIATGSEV
                     DLAMKAADVLDAEGVKVRVVSMPSTNVFDKQDEAYRESVLPRSVTKRVAIEAQLADFW
                     YKYVGFDGRIVGMNSFGESAPADQLFKLFGFTVENVVAKAKEIL"
     gene            32006..32218
                     /gene="rpmE"
                     /locus_tag="PXD18_000491"
     CDS             32006..32218
                     /gene="rpmE"
                     /locus_tag="PXD18_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005625828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HDL6300954.1"
                     /translation="MKQGIHPEYKEITATCSCGNVVKTRSTVGKDLNLDVCGNCHPFY
                     TGKQRVVDTGGRVERFNKRFSIPSSK"
     gene            complement(32273..>32916)
                     /locus_tag="PXD18_000492"
     CDS             complement(32273..>32916)
                     /locus_tag="PXD18_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase family
                     protein"
                     /protein_id="HDL6300955.1"
                     /translation="DFTTVFPKQVHFADYLNYAIFADFLEKNQVNYNLNIPNELSSFA
                     NTLWQEKKIRLLLNPQGSMREISTQELSELLSMIDKRYVQHISCLLTNTTNSAEYLSK
                     IKAPFEISLAPNSDILGYCALVNSADIVIAVDGGGVHISCALGKKLLSFYANHPANIA
                     RWYPKPKKDVETFMVIADKWTEDNNDTRGFSLVAPAKWLNHQFAKLIEKYTAC"
BASE COUNT         9572 a         6468 c         7279 g         9597 t
ORIGIN      
        1 agaaatttcc acataaaaat aaaattctaa atttctttga tttaagtaaa atttaatttt
       61 gtttgatgga tttttactcg ccaaaaacac tattttttct gcttttaata gtttgatcaa
      121 aaaatacgta aaatcttgtt gtgttactgt ttcccatcgc taatatagca tagcttgtta
      181 gataattctt taaaggagat tactatggct atgccatctc aacgtttttc tcttacttgg
      241 gtactaaatt tatttggtac tgcggtagga gccggcgttt tatttttgcc aattaatgca
      301 ggtatgggtg ggttctaccc acttattatt atgactttgt tagttggacc aatgacatat
      361 ttagctcacc gtggcttaac acgttttgtg ctttcttcaa aatacaaagg gagcgatatt
      421 acggctgttg ttcgtgaaca ttttggtgaa caggccggta aattgatcac gctactgtac
      481 ttctttgcca tttttccgat tttactgatt tatggtgtag gtattaccaa taccgtgagt
      541 tcttttatgg agaatcagct tcatatcgcg ccaccatcta gggctgtatt atcgtttatg
      601 ctaatagctg ctatgatcgg agtaatgtta ttaagtgagc aagtcatgtt aaaaatcaca
      661 acttgtcttg tgtatccatt agtgttgatt ttattgggct tatctattta tttaattcca
      721 cagtggaata cagctgcctt acagcaaatg ccaactacag gagacttcct tactacactt
      781 tggctgacta ttcctgtttt agtctttgct tttaaccatt caccggctat ttcttctttt
      841 gcactttctc aacagaaata ttaccaagat gacaagaagg ctgaaattga atcagctaaa
      901 gtattacgtt ctaccgcctt tatcttggtg ttatttgtga tgttctttgt atttagctgt
      961 gtattaactt tgacacctga agaattagca caagctaaag tgcaaaatat ttcgattctt
     1021 tcttaccttg cgaataaatt tgataatccg attatttcct attttggacc gttggttgct
     1081 tttttggcga ttggtagctc tttctttggg cattatttag gtgcgcgcga ggggttagaa
     1141 ggattggtta atcaaatgcg taaagagccg attgatccaa gcaaattccg caaaattacc
     1201 gctattactt ttttgatcat tttatggatt gttgcgacta tcaatccaag cattttaggc
     1261 ttcattgaaa gccttggtgg gccgattatt gcgatgatct tgtttattat gcctgtctat
     1321 gccgtatata aagtaccggc acttgcacgt tttaaaggtg aatttggcca tttatttgtg
     1381 cttgttatgg gttgtattgc tatttcagca atagtatatg ggttactgta atctttctaa
     1441 aatcaatgta gaatacgccc ttttattttc tatgtgaatt tgtgtttatg attagtgtat
     1501 ttgatatgtt taaagtaggg attgggcctt ccagttccca tactgcgggg ccgatgaaag
     1561 cggcaaagga atttgtcgat gaattacaaa atcgcaaatt tttaaacaaa attgaccgct
     1621 tgcgggtaga tgtctatggt tcattatcac tcaccgggcg aggacataat acggatattg
     1681 ccatcataat gggattaatg gggtatttgc ctcataatgt ggatattgaa cgtattgagc
     1741 agacgattga aaatctaaaa caaaataagc aacttatcat tgctgaaagc agtgttgagc
     1801 ctaaagtgat tgcgttcgat ttttatgagg atatgccatt tcatcgagat ttcttacctc
     1861 ggcacgaaaa tggtgtgaaa tttagtgcct tgagcggtga agagttgcta tttcaaaaca
     1921 cctattattc tattggtggt ggctttattg ttgatgaagc taactttgag caagttaaaa
     1981 attcagatct ttctgttcca ttcccatatc agaatgcagc agatttactt gcacattgta
     2041 agaataacgg gttaccgctt tcttctttag tctggaaaaa tgagcttgct ttacgcagta
     2101 gagtagaaat ttcggattat ttggcaatga tttggaatac aatggaagcc tgtattgagc
     2161 gtggtttgaa tacggaaggg ttactacccg ggcctctgaa agtggtacgc cgtgccagtg
     2221 ggctacgcag aatgttagag gcaaacagta aattcaatac cgacccaatg caaattatcg
     2281 attgggtgaa tatgtttgcc cttgccgtga atgaagaaaa tgcggcaggt gggcgagtag
     2341 tcaccgcacc taccaatgga gcctgtggta ttgttccggc tgtgttggcg tactaccaaa
     2401 aatttattgc acagcttaat caagatacta ttgagcgtta tttattgact accagtgtga
     2461 ttggttcgtt atacaaaatg aatgcctcta tttccggtgc tgaagtaggt tgccaagggg
     2521 aagttggtgt tgcttgttca atggcggcag caggtttaac ggaaattatg ggtggcagtg
     2581 ctgaacaggt gtgtatggct gcagaaattg caatggagca caatttaggc ctaacttgtg
     2641 accctgttgg cggacaagtg caagtgcctt gtattgaaag aaatgcaatc gcttcagtca
     2701 aagcgattaa tgccagcaga atggcactac gccgtacttc ttcgcctcag gtaagtttag
     2761 ataaagtcat tgaaacaatg tacgaaaccg gcaaagatat gaatgcaaaa taccgtgaaa
     2821 cctcaaccgg tggcttagca atcaaaattt taccttgtga ttaattaatg aaaaaggcta
     2881 ccttatcaaa ataaggtagc cttttagttt gtagaacatt aatgacggaa atgcctcatt
     2941 ccggttagta ccactgccat accgtgttcg ttggcggcat caatcacttc ttgatcacgc
     3001 attgaaccac ctgggtgaat cacacaagta atccctactt ttgcagcagc gtcaatacca
     3061 tcacggaacg ggaagaacgc atcggaagcc attacacaac ccacaacttg taagccctcg
     3121 tcttccgctt taatacctgc aatttttgcg gaataaacac ggctcatctg ccctgcaccg
     3181 ataccgatag tttgcccgtc tttggcatac acaatcgcat tcgatttcac atatttcgcc
     3241 actttccagc agaacaatag gtcttttagc tcagcttcag ttggtttacg ctctgaaacc
     3301 acctttaaat cgtcaataga tacagagcct tggtcggcat cttgcactaa taatccgccg
     3361 tttacccgtt tgaaatctaa gcgttttaca gcttctgaga actcgccaca ttcaagcaca
     3421 cgcacgtttt tcttagtggc taacacttct ttggcagaag cagaaacggt tggtgcaata
     3481 atcacttcaa caaattgacg gtctgcgatg gtttgagcag tttcgccgtc taattcacgg
     3541 ttaaaggcaa taatgccacc gaaagcagaa gttggatcgg tttggtaagc acggttgtag
     3601 gcatctaaaa tatttttacc caaagcaaca ccacaagggt tagcgtgttt tacaatcaca
     3661 caagcaggct cgctaaattc tttcacgcat tcaagagccg catcggtatc tgcaatatta
     3721 ttatacgaaa gggctttacc ttgtaactgt ttggcggtgg aaacagaggc ttcttttaac
     3781 tcattttcga catagaatgc agcgttttga tgcgaatttt cgccataacg catcgtttgt
     3841 ttacgcacaa aattgaggtt taaggtgcga gggaattgtc cacttggttg ggttaaatct
     3901 tcttcctcag ccccttgata aggcggcact ttttgcccga aatagttggc aatcattgaa
     3961 tcgtattgtg cggtatgctc aaacgcttta atagcaagat taaaacgggt ttctaaagtt
     4021 aaactgtttt gatgttgatc catttcggca agaatagcat caaaatcatt gttattgacc
     4081 acaatcgcca catctttatg atttttcgct gcagaacgca ccattgtcgg accaccgata
     4141 tcaatatttt ccaccgcatc ttcaaggcta caatttggat tggcaacggt ttgagcaaaa
     4201 gggtagaggt ttactaccac catatcaatt cgttcaatgc cgtgttggtt catcacttca
     4261 tcatcagtac cacggcgacc tagaattccg ccgtgcactt tcgggtgcag ggtttttaca
     4321 cgcccgtcca tcatttcagg aaagccggtg taatctgata cttctgttac tagcaaaccg
     4381 gcttcagcca gtaattttgc ggttccgccc gtagaaagta attttacccc acgagccgat
     4441 agcccacgag caaattcgac aatgcctttt ttatcagaca cacttaataa cgcctgttga
     4501 atcgccattc ttaaattcct taaaatgagt gttaacgtga aaataaacgg caaagattat
     4561 aacgcaaacg tttgcttttt tcatctacaa gtggtcgatt ttgcaaattt ttctgcaaaa
     4621 tcgaccgctt gcactcgtga ttaaagcggg tagaatagag gaaaaaaatc ggaggaacta
     4681 tgattaacca caatttagca gatttcgtat ttgagtattt taccgaaaac aacctaaaag
     4741 caggcacact acgttatcgc tacataaaag agaacgtgat tgatgcttac agtacccgag
     4801 tagatgatgc ctttcaaggt aaaggtattg caggagagct ttacaatgct ttaattgcgt
     4861 ttgcgcaaga aaaagggctg aaaatcaagc caagttgtag ttatattgag gtaaaaatgc
     4921 aacgaagtca tcgagattta attgcttaga gaggagcaag cggtcgtaaa atttcaaaaa
     4981 tttacgaccg ctgtcttatt caattctcaa aaatccatca cacaaaatat aagccctatt
     5041 cattaaacaa cgccatataa aacttatttt caaatgtatt aagcggagcc cgtttggttt
     5101 tgctttcgag ctcgccggtg gaatagccgt taataaattg cacaaaagcg atgcgttcgc
     5161 cacgggcgtt tttcataaag ccggcaaggt tgtaaacccc tttcagtgag ccggttttgg
     5221 caatcagatt tttggcaagc ggttctgttg aaatagagcc tctgccggaa atagtaccgt
     5281 ccacgcctgc aatcgggaag gtttcaaaca gttttaagct ttcttcgttt tgagcgatat
     5341 attcaagggt ctccagcatt gttcggctgc tgacttgatt atgacgggaa agccctgagc
     5401 catcagccac cacgctgttt ttaaaatcaa tattggcttt ggtttttaat aactggcgaa
     5461 tcacataact acctaattgg aacgatgcgg ggcggttgtg ttgcttgttg gcaacggttc
     5521 taaacagggc atcggcaatt tggttatccg attttttcat catttttttc aataataccg
     5581 gcaacggctc ggaataatgc tcggcaagta gcgtgccgtt ttgggcagta agtggctctt
     5641 ttacttgccc gttaaaggca attttcaggc tttttaactg ggctttaagc atatttgccc
     5701 cgtaattagt tgggtcttgc accgaaaaac ttaagccgaa cggttgagac tggcgagcca
     5761 tacagccttt gatttggtag cggttgttat cgtgaaccac cacatcaagc tggcaaaacg
     5821 gagcttcttt cggctcgaca atataagcag agctaaacac ctgcaccgga taagcggacg
     5881 gcacattcac tttagcaaat tcgccaatgg gttggtcggc atttaaggtg acataaaaac
     5941 agttgtgatc cacattaatt gccgccggtg gggcgttaaa gcacatcgtc aagtcgttcc
     6001 aaatccaacc ggaggctttg tcgtggctgg cgaaaaccga cgggtctaga attaaatccc
     6061 cctcaatttt attgatacct tgttgcttta atttgctcat taattgataa atttgaccgc
     6121 ttgtaagctc agggtcgcca ctaaaacggg caattaaatt gccttttaac actccgtttt
     6181 ctacttttcc gttggttaaa agggcagttt gaaagcggaa atcatcgttt aaagttaatt
     6241 ttgctgccag tgccgtaaag actttttggg tactggcagg tagcataaaa atatcacttt
     6301 ggtattgggt gatgatttgg ttagtgtcta aatttttagc aataaaacta acagaagtac
     6361 cggcaggcaa ggtatttaat aattcttcgg tattaatttc agcctgtgta atgcttggaa
     6421 tcagaagtgt agataagata aatttattta aaaaagcacg agtgaaattt ttaaaaatca
     6481 taataaaagg ggagttgaaa tttttagtga gaaattgaat aatagccctt tcgttttaat
     6541 tcgtaaaccg ataattttta gtaaggaaat agatttaatg aaacaaattc ctatgacggt
     6601 gcgtggtgca gagcaactgc gtgaagaatt ggatttttta aaaaatgtgc gtcgcccaca
     6661 aattattgat gcgattgcag aagcccgtga acacggtgat ttaaaagaga acgcggagta
     6721 tcacgcagcc cgtgaacaac aaggtttctg tgaggggcgt attcaagaaa ttgaaggcaa
     6781 attaggcaat gctcaaatta ttgacgtcac taaaatggca aacaacggca aagtgatttt
     6841 tggggcaacg gtgcagttag tgaatgctga tacagatgaa gaagtcactt accgcattgt
     6901 gggtgatgat gaagccaata ttaaagaggg cttaatttca gttaattccc cgattgctcg
     6961 tggtttaatc ggcaaagagg tggacgattc agtcagcatt accacaccgg gtggcaaagt
     7021 tgagtttgac attgttggcg tagaatatat ttaatctacg ctagggcgaa ttacaatagt
     7081 ggggcgaaaa aattttcgcc cctactttat taaacaatct cactcggtac aaagaagtag
     7141 gcaatttcac gttttgccga ctcttcggaa tctgaaccgt gtaccgaatt ttcacgcata
     7201 cttaaggcat ataaatcgcg aatggtgcct ttttcacggt tatccggatt ggttgccccc
     7261 attaatgcac gataatggct aattgcattt tccccttcca gtacagaaac gacaatagat
     7321 cctgatgtca taaattccac taacggctca aagaaatctt tgcctttgtg ttccgcataa
     7381 aatccttccg cttgctcacg ggtaagatgt acttttttta gagctttgat agtcagcccg
     7441 ttttcttcca attgagccaa aattttgccg attaaattac ggcgtgtagc atccggctta
     7501 ataatagaaa gcgtttgttg aatcatcatc ttctcctatt taacttgcat tcccggctga
     7561 acaccgctgt ctgcatctaa taagaacagg ttcgcaccgc ctgtgccggc agataaaatc
     7621 attccctccg acataccgaa cgacattttg cgtggagcaa ggttggcaat tacaatcaca
     7681 aaacgcccga taagtgcttc cggatttggg taggccgcct taatgcctga gaatacttgg
     7741 cgttggtggt cgcctaaatc cagctcaaaa cgtaacattt tgtctgattt tggcacagcc
     7801 tcgcagttca atactttggc tgcacgtaaa tctaatttcg cgaaatcatc aatcgtaatt
     7861 tcagggctga ttggctcaac tgcaatattt tcttgttttt cgaccgcttg ttgttccact
     7921 ttttgtgttc ctttggtttg gttttcggtt ttcttattcg cttcggcaaa taaggctttg
     7981 gtttcatcaa tcactgcatc aatctgtttt ttctcaaggc gtgagaatag cgatttaaac
     8041 ggtgccacgg tatgcccgaa taatggggta gcgatattat cccaacgcaa ttcgctttgt
     8101 aagaatgctt cggcacgttc tgccagtttt ggtaacaccg gttttaggta gctcatcagc
     8161 acacggaata actcaatgcc cattgaacaa accgcttgta attcagcctc tttgccttct
     8221 tctttggcga tgacccaagg ggctttgtcg tcaatgtatt tattggcttt atcggttaat
     8281 tccataatgg cacgaatagc tttattaaat tcacggtttt catagaaatt cgctatggtt
     8341 tctgcttgag cggtaaattc attaaataac gcttcgtcat ctaatttttc agctaatttg
     8401 ccctcaaagc gtttagcgat aaaactggcg ttgcgagaag caagattcac taatttgttt
     8461 acgatatcgc tgtttacacg ttgcacgaag tcgtctaaat taaaatctaa atcttcaatg
     8521 cgatcgttta attttgccgc atagtaatag cgtaagcatt ccggatcgag atgttttaaa
     8581 taggtgttgg cttgaatgaa tgtaccacga gatttcgaca ttttcgcccc gtccactgtc
     8641 acataaccgt gagcaaacac attggtcggt ttgcggtagc cgctgccttc caacattgcc
     8701 ggccaaaaca ggctgtggaa gtaaacaatg tctttaccga tgaagtgata aagctcggtg
     8761 gtggaatctt tttgccaaaa ctcatcaaaa tcaatgcctg cacggtcgca taaattttta
     8821 aacgatgcta tataaccaat aggggcatct aaccaaacgt agaagaattt gttttctgcg
     8881 tccggaattt caaaaccgaa ataaggggca tcacggctga tgtcccattg ctgtaaacca
     8941 ctttcaaacc attcttgcat tttattggca atttcaggtt ggagtgagcc ggaacgagtc
     9001 cactctttca acattccctc aaagcttggc aggtcaaaaa agaaatgttc tgattctttt
     9061 accaccggag ttgcaccgga aactgccgag cgagggttga ttaaatccat cgggctatag
     9121 gtagaggcac atacttcaca gttatcgcca tattgatctt cggctttaca tttcgggcag
     9181 gtccctttca caaagcgatc cggcaagaac atattttttt ctgggtcgaa cagttgtgaa
     9241 atcactttgc ttttaataaa accgttcgct tttaaggttt tataaatatc ggtagtgatt
     9301 tggcggttct cttcgctgtg ggtggaatgg taattatcaa agctgatatt aaaactggca
     9361 aaatccgctt cgtgatcggc tttggctttt tcgattaact gctcaggggt aatgcctaat
     9421 ttatcggcat taagcataat aggcgtgccg tgggcatcat cagcacagac aaagtggact
     9481 tcattgccac gcatacgttg aaaacgcacc caaatatctg cttgaatatg ttcaagcata
     9541 tgacctaaat gaattgcacc gttagcatag ggcaaggcac aagtaacaag catttttcgt
     9601 ttttggttag ccattctttt tctcattaaa attagggtaa aaattgccgt ctattttagc
     9661 ccaaaagtgg caggtttacc agttggcgtg aatttattag agctttgggc taacaagcgg
     9721 tagaatatga tgcgctagag gcgaaacatt tttcgcctca atttcccaaa tgatgatgtg
     9781 ggcgaaagat gtttcgcctc taaacctatt ttggataaaa atagtatgcg acaagtaaag
     9841 ttataccgct accaactccc cattcaaacc ggtgtagtgt tacgcaagca acctttgaaa
     9901 gaaaggcaag gggtgttggt gtgtttgcaa gaacaggaga aagtcggctg gggcgaaatt
     9961 gcaccgcttc caagttttag ccaagagagc ctagaacaag ctgaaaacca agctgtgaat
    10021 tggttaaagg cgtggcagaa aggagagcct gaaacgttag agcagctttt cccgtctgtt
    10081 gcctttgggc taagctgtgc gttggctgaa ctgaataatg aattaggcga gcaagcgaat
    10141 aaccaatcgg cggtgctgtg ctatggcgat ttggaaaagt tacacacggc atttagccaa
    10201 catacgaacc caatcggtaa aattaaaatc ggtctcaatc ctgaacagga aggcgagcag
    10261 gcaaatttgc tgttgcatac ttttccgaat ttacgcctaa ggcttgatgc caaccgtctt
    10321 tggagcttgg aacaagcggt caaatttgct gaaaaaattg caaatgaaca taaaccccgt
    10381 attcaattta tcgaagaacc ttgccaagcg ctcgaacttt cccgccaatt tgccacacaa
    10441 accgacattg cgattgcgtg ggacgaaacc gtgagagagg cgaatttttt ggtaaaaaaa
    10501 gagccaaatt tgaccgctat tatcattaaa cctacgctgg ttggttcgct tgaaaaatgc
    10561 gtgaatttaa ttcaacaagc acagaagcaa ggattagtag cggtgattag ttcaagtctt
    10621 gagagcagtt tgggcttaac ccaactggct cgtatcgccc aacaatacac cccaaacagt
    10681 gtgccggggt tggatacgtt aaatttaatg caacaccaat tattgcgaga ttggcacgac
    10741 tctagcttgc cgttggtcgg gctagaaagc gaatttgtta gggaagttgt ggtataatct
    10801 cccaattaaa cactctctcc ccttgtggga gagagaccgc ttatgagcgt tcagcgaaat
    10861 aagcagagag aggggaagcg gtcatttttc taaaaaagtt tgcacatttc ccctctccct
    10921 gatttttctt ctggacgaag acgtatttcc cccctctccc tgatttttct tctagacgaa
    10981 gaaaaatctg tccctctccc acgaggggag agggtaaagt aatttatggt ataaaaatag
    11041 tatgcgttta gacaaattta tcgccgaaaa taccggtttg acccgttcac aagcggctaa
    11101 agtgctgaaa agtggtgtgg tgacggtaaa cggcaatatt gaaaaaagtg gtgcggcaaa
    11161 aatcagtcaa gaagatgaaa tttattacga agatcagaaa ttagagtggg tggaagaggg
    11221 gcagtatttt atgctctata agccacaggg ctatatttgt tcacacgatg atggtgagta
    11281 cccaacggtg tttcaattct ttgattatcc gttaatgact aaattgcata ccgcagggcg
    11341 gttagatgtg gataccacag ggctggtgct gttaaccgat gacggcaaat ggtcgcaccg
    11401 tattacctcg cccaagcacc attgtgaaaa gacatactta gtgacgcttg ctgatccggt
    11461 ggaagatttt tatgcacagc gattggcaga aggaatttta ttgcgtggcg agaaagagcc
    11521 aaccttgccg gctcaacttg aaattttaga cgattacaat gtgaatttaa ctattagtga
    11581 ggggcgttat catcaagtta agcgaatgtt tgccgccctt gggaataaag tcgaggcatt
    11641 gcaccgctgg cgaattggcg atgtggtgtt agatgaaagg ttggaagaag gtgaattccg
    11701 ctcgctcact tcagaggaga tagccagttt taatggaaag tagaagacca agcctgagct
    11761 ttttcatcat attaggtatg atggcaatgt tgccaccatt agccattgat atgtatttgc
    11821 cctcattttt agacattgcc cgtgacttgg cggtttcgca agaaaaagtg caaaccacct
    11881 tggcggtatt taccctaggt tttggggcag ggcaactatt ctggggaccg atggcagaca
    11941 gctttgggcg gaaaatcatt attttaatcg gattagtcgg ctcggcgatt gccgcttatt
    12001 ttctgaccca agttcagaat attgaaacat tttacctgct aaggttagta cagggcttat
    12061 gtgcggcagc cccggcggtg gtgctgggag cattagtgag agatctgttt gagcgtaatt
    12121 tatttgccaa attgatgtcg gttattatga ttatttctat gcttgcccca ttgcttgcac
    12181 cgattgttgg cggttatatt gccaaatatt tccactggca ctcaattttc tatgtgttag
    12241 tggcgatggg gattttgtgc gtggtattaa ttagttggaa aatccctgaa acattagccc
    12301 ccgaaaaacg cctgccgtta agttttggca aaactttaag caattttgcc atcttactga
    12361 aacataggcc tactcttggt tatgtgctga ttggcggctt aacctttgca ggtattttct
    12421 gttttttaac ctcaggctcg attgtctata ttgggcttta tggcgtgtcg caagaaaatt
    12481 tcggctattt cttcgggctg aatatgattg tgatggtgac gatgacggcg attaacagca
    12541 aaatggtagt gaaagtcggc tctgaaacga tgttacgaat tgctttagct atgcaactgt
    12601 tagccggcat ttggctggct ttagtggcga tttttgattt aggcttctgg gcaatggcaa
    12661 tcggtattcc gctttatatc ggaatgcttt ccaccattgg tagtaatgcc agtgccgcca
    12721 ttttagagca atttccacaa atggcaggca cggctaacgg agtagcaggt acggctcgtt
    12781 ttggtgttgc ttcccttgtt ggagcagggc tttcacatat tgctgtaacc agtgctgccc
    12841 caatgctttt ggcgatggca ttgtgcgtta tgttagccgg tgtggtgtat tattttctgt
    12901 gttataagcg ataactaggt tggggttagc ttgcgaaaac ccaacaaatt tctacaagcg
    12961 gttaataata gtacattttt tgcaaatttt taggcagaat taaccgcttg tgtggtacga
    13021 gcgtggacgc tcgcaccatc ggggcaatat ctactaagat tttaaaaaca gcgaaataga
    13081 ttccaaatgc ccggtgtggg ggaacatatc aatcattgcc gctttttcta gcctgtagcc
    13141 tagttgcaac agtttttcgg catctcgcac cagtgttgcc ggattgcaag agacataaac
    13201 aatccgctca ggattgagtg atgtcaagtg atctaggcaa aatagtgctc cgttgcgtgc
    13261 cgggtcgagt agtaccttgt taaacggctc ttttgcccaa ggtttgtcag aaaacggctc
    13321 atctaaattg gtttggtaaa attccacatt ttttagaccg cttgtcaccg cattctctcg
    13381 ggcttgttgc accattggtt ctaccccttc cacaccgacc accgatttcg ctcgctcagc
    13441 aataggcaag gtaaaattcc ccattccaca gaagagatct aacactcgat cttggttgga
    13501 taattccagc cactcaaggg ctttttccac cattttttca ttgagcgtgg cattcacctg
    13561 aataaaatcc cgaattgaaa aatgcaactt tagaccctga atttgataat acgggcgttc
    13621 accgcacaga tgctcaatgt gattttcgct agtcatcaca aaaagagata attgctcttg
    13681 tgtggcgaat tgacgcaaat tgtggttatc ttgcgccgat aatgccccta aatggcggaa
    13741 aaatagggca atggtattgt ccgcactgac cagctcaata tgccccaatt ttttcggctg
    13801 ttgccagttt tcaatcaggt gttttaattt tgggagcaaa ttggcaagcg gttcaaccag
    13861 cacttcacag tgtgcaagcg gtataatttg gttggaattt tgcaaacgaa agccgattac
    13921 cgccttgcct tgctggatcg caatgcttaa ttttgcccga cggcggtagt gtttatcgtt
    13981 gccgataatc atcggctgaa catcaatagc gtgggtttgc aatttctgta agcgttggaa
    14041 taaagcctgt tgttttgcct tacgttgcag ttcaagcgaa atatgctgca tttggcagcc
    14101 accgcattgc ccgtaaagtt cgcagcttgg cattcgccga tttgcagatt ttttaagaat
    14161 tttaaccgct tgtccacgtc cgtattggcg tttctcttcc aacactttaa attccacctg
    14221 ctcatcaggc agggcatttt cgataaacca agttttgccg ttgattttgg caatccctaa
    14281 gccttgataa tctaacgatt gaatagttgc cttttgacaa gcgggtgatt ttatcggttt
    14341 ttttgccgat ttttcagaat aaaaaatagc cattgttttc agatgaattg ttatgatata
    14401 aagtgtcgaa atggggagat tatataagaa aagcagttgg cggaaaatgg aggcaatatg
    14461 atttcatcgg tttggaatga acgttatttg gcggataaaa aacgggaaca agatcaccgc
    14521 tcgccttttc agcgggatcg ggcaaggtta ttgcattcgg aggcttttcg ctgtttgcag
    14581 gcgaaaacgc aaattcacgc cgtgggggaa gatgattttt atcgaacccg tttaacccat
    14641 tcgttggaag tggctcaaat cggtagcagt ttgcgagaaa aattattagc ggatgtggaa
    14701 ggctttcaag cggtctgttc ggagcaggaa tttgcaaaaa atatggcaaa tctgaccgct
    14761 ttattgccgg atcatagctt ggtggaatcc ctttgttttg cccacgatct cgggcaccct
    14821 ccgttcgggc acggtggtga aatggcgtta aattataaaa tgtacgcctt tggcggcttc
    14881 gagggtaatg ctcaatcctt tcggattatg acccagcttg agccttacac cgaaacagcc
    14941 ggaatgaatc tgacccgtcg caccttactg ggggtaatga aatatccggc actcttgtct
    15001 caaacctcgc cgattgagcc ggcagaaatg agcgaggctc ggcatattaa tttgcaccat
    15061 tttccacaga gcaaagggat ttttgatgac aacaaccact tttttgagtg ggtattagcc
    15121 ccgttaagtg aaaaagaccg acgccaattt tgcacggttc agcccaatca agatccgaaa
    15181 cagccaaaca aaacgcaata taaatctctc gattgcagca taatggaact agcggacgat
    15241 attgcctatg gcgtacacga tttggaagat gcgattgtag gtggaatggt cacaccgcaa
    15301 tcgtggcaaa atgcggaaaa attgctggcg gagtgccaat ccgattgggt gaaacaacgc
    15361 ctgccggaga ttcgggaaaa gctcttttct cagcaccgct acgagcgaaa agatgtgatc
    15421 ggggcattag tgaatcattt tattaccaat gtgcgttgga aagctctgcc tgaatttgac
    15481 gagccgttgc tacgttataa tgcctattta ccggaaagtg ttgcctgtgt gctgaaaatc
    15541 ttgaaagatt ttgtgtatca atatgtgatt tgtgatgcca aaacccagcg ggtggaacgc
    15601 aaggggcaac gcattctaat ggaattgttc gatattttaa gcagtgatcc gatgcgatta
    15661 ctccctaata atgtgcggga acgttggaaa aatgcggaag aatctaagcg tgcaagggta
    15721 atttgcgact atttagccgg tatgtctgat gggcaggcgt ttaaactttt tgaaagttta
    15781 taatgaactt tgttaatttt gcaaggtctc agtaataggt ttcatttatt taataggaga
    15841 tttcaatgaa aactgtttct aaaggtcttt tagtattagc aactttggct tctgcaacag
    15901 catttgcggt ttcttccaag tgaaatttat cagcctcgtg gcgaattagt taaagcagat
    15961 cgtcaaggta atggtgagtt tgaagtagaa tatcgtgtca gtggtaatga tgttcgtggc
    16021 ttagcgaaaa gtgcgatcgc ccacgctaaa cgtaaaggtt tccatttagt agaatctgat
    16081 attcatagag atgatgctga tttaaaattc aaacgtggtg accaagagct ggatattgaa
    16141 attgaagtaa aaggtagaaa tcggattgaa tataaggcag atctagattt agataaaaac
    16201 taaatttacc ccttaaaacg accgcttgtg tgatttaacc gcacaagcgg tctttttatt
    16261 gtgctttttt gcaaaaatac tcaagccgac cggtcccgga atttggtaaa atagccgttt
    16321 aaatgacaat aatgatgctt ttacttatta cttagaggaa aaaatgtttt tagtcggtca
    16381 gcgttggcta agtgaatcgg aaaataattt aggtttggga atcgtgactt cggtggatca
    16441 tcgcactgtc actatcaatt tcccggcagc ggaagaagag cgggtctatg caattgcagt
    16501 tgcaccttta actcgagtgc agtttcaagc cggagataga attaacagta tagatggctg
    16561 gcagttagag gtttcagagg ttgtggaaaa tcaaggtgcc gtaatctatt tgggcaaaag
    16621 ggtggataac ggtgaagaag cggtactgcc tgaaatgttg ctcgatcata aaatcagttt
    16681 cagcaaaccg caagaccgcc ttttttcggc tcagattgat cgctcagatc gctttgcatt
    16741 acgctttaac gctttgcagc accagcaagc gcaatatcag tcgccactgc gtggtttgcg
    16801 aggcattcga gccagcctga ttccacatca attacatatt gcaaaagaag tcgggcaacg
    16861 ccttgctcct cgtgtgctat tagccgatga agtgggactg ggtaaaacta ttgaagctgg
    16921 tatgattttg caacaacagc tattttcggg cagagcagaa cgagtattgg tattagtgcc
    16981 ggaaagtttg caacaccaat ggttggtgga aatgcttcgc cgttttaatc tgaaattctc
    17041 gttattcgat gaagaacgtt gtagtgattt tgataaacaa gatgaaaatg gcgatgatgt
    17101 aagtgaaaat ccatttgaga gcgaagcgtt agtcattact tcactaaact ggctggaaac
    17161 ctcaccgcaa cgagccaatc aagtgcttgc tgccgactgg gatctattaa ttgttgatga
    17221 agctcaccat ttagaatggt cggaaaccga atcttctatc ggctatcagt tggtagagcg
    17281 tttatctcaa caaattcctg ccgtcttgct tttaacggca acaccggagc aattagggca
    17341 agagagccat tttgcccgct tggcgttgtt agattcggat cgtttttatg attatgccga
    17401 gtttgtacag gagcaagcac agtataaacc ggtggcagat gcggtgagta gcttattaag
    17461 cgataaaccg ctaagtaatg acgagcagaa tgcgattgcg gagctgttaa gcgagcaaga
    17521 taccgagccg atgttccgtg caattaatag caaaaaatcg gacgaaaatg accgcttgca
    17581 agcccgtcaa gagctgatta gtgagctaat tgaccgccat ggaaccagcc gggtgttgtt
    17641 tagaaatacc cgtcagggag tgaaaggctt cccacatcgg gaataccacc aaatcagcct
    17701 agaaatgccg aaacaatacc aaaatgcgtt aaaagtgatg ggaatgatgg ggagtgtgag
    17761 ccaaagtgat ttgctctatc ctgaatattt gttccaacga atgaacccga atgcgaaatg
    17821 ggctgaattc gaccctcgga ttgattggct catcactttc ttaaaaaatc atcgtgatga
    17881 aaaagtgctg gtgatctgca aacaggcgga cactgcgatt gctttggagc aagttttgcg
    17941 tgagcgtgag gcgattcgtt ctgccgtttt ccacgagaaa atgtcgattg ttgaacgtga
    18001 caaagctgcc gcctattttg ctcaacaaga agaaggcgct caggtgctga ttagttcaag
    18061 catcggttca gaagggcgaa atttccaatt tgctaaagat ttagtgctgt ttaatttgcc
    18121 ggataacccg gatttattgg agcaaagtat tgggcgatta gatcgtatcg gacagaaaaa
    18181 tgacattcag atttatgtgc cttgctttaa tttatcggct caacagatgt tggcagagtg
    18241 gtatcacaag ggcttgaatg cgtttgaaga aacctgcccg atgggaacag cgatcttccg
    18301 tgaattaggt gaagaattgc aacaattcct gcaaaaacct gaactttcag cccaatttga
    18361 tgattttgtt gcgaaaacct ataaacgcca acagtatttg aaagccgaac tggagaaagg
    18421 acaggacaga ttattagaac tgaattctaa tggcggagaa gcagctcaac agctcgctaa
    18481 tgatattgcg aaagaagata ataatccgca gttggttaat tttgccttga gtttgtttga
    18541 tgtgattggc gttgaacagg aagatttagg cgagcagagc attgtgatta gcccaaccgg
    18601 acatatgctt gtgcctgatt tcccggggct atcggaagat ggcacgacca ttacctttaa
    18661 tcgtgaactg gcgttaatgc gggaagaggt ggaatttctc acttgggatc acccgatgat
    18721 ccgcaatggt attgatttaa tcacctccgg cgatattggc aaatcagcaa tctcattgct
    18781 ggtgaataat aaattgcctg ccggtacatt attacttgag gcgctttatg tggtggaagc
    18841 acaagcaccg aaagggctaa atttaacccg tttcctaccg ccaaccccga ttcgggtttt
    18901 agtggataac aaaggcaaca atattgctcc gcaggtctct tttgccgggc ttgaacgcca
    18961 attaaaaccg gtgaataaac agatggcaaa taaaattgcc aaaatggctc gagcggatat
    19021 tgaaaaatta attaaagcga gtgaaaaagc ggtagaacct caggtccaac aggtgattga
    19081 aactgccaaa tttgaggcaa atagcaaatt aaaagcagaa ttacaccgct tggaatcact
    19141 caaaatggtg aataaaaata ttcgagccga tgaagttgaa gccttagaac aacagcttaa
    19201 cgcttccctt gcccaacttg aaacggcaaa ttatcgctta gatagcttgc gagtgattgt
    19261 aagtaataaa gcgtaatttt ttgcaagtac gaaaagtgat tttttcgatc tgtgtcgaaa
    19321 aaatcacttt tctattttgt gtcatccttg cagattattt atgctattcc tcatattgta
    19381 aaaggtataa aaaaggaata ttatgtatat agatttgcaa tatgctgtgc cgttattgtt
    19441 tgaatacgac ccgaacaaaa gccaaattaa tttagccaaa tatggtattg attttgaaca
    19501 ggcaaagttg ctttgggaag atgaacgaaa agttgtactg gaggcttgca ttgaacccga
    19561 attacgctat ttcctgattg gcaagattta tgataaatat tggacagcgt tttttacacc
    19621 aagaaatgat gttattcgtt taatttcagt tagacgttcc cgtaaaaaag agatctcata
    19681 ctatgagaaa taccattagt gccgaagaat tagaacgtat cttcgatgaa ggcaaagaag
    19741 atattttaca atactgcgat ctttctaccg ctcatcgccc ggggcaaatg aaaagggtga
    19801 atgttgattt cccaaattgg atggtagaag cgttagataa gcaagccaga catttaggtg
    19861 tgcctcgcca agccttgatt aaaatgtgga ttgcggaaaa attaccggtt caatcaccta
    19921 ggtaagcgag tggcaaatgg cattaattga atataaccct ccattagaac catttttaga
    19981 tgaggtttat cgggataacc atattttagt aattaataag cctagtggtt tattatcggt
    20041 gccgggcaat cgtcccgaat attacgacag tgcaatgact cgagtacagc aaaaatatgg
    20101 ctttaccgaa ccggctcatc gtttggatat ggcaacaagc ggtattcttt tgttcgccct
    20161 aagcaaagcg gcggaaaaag aactaaaacg ccaatttcgg gaacgtgaac cgaaaaaaca
    20221 ctatattgcg ttactttggg gcaaattagg tgaaaaagtt ggggataagg gcgaaatgaa
    20281 ttttccgctg atttgcgatt gggaaaatcg cccccgccag aaaatttgct atgaacgagg
    20341 caaaaaagcc attacccatt atgaagtgtt agctcattat ccgaataata tagcgagagt
    20401 aaaactcacg cctatcacgg ggcgttcgca tcagctacga gtacatagcc ttgcgttagg
    20461 tcacccgatt attggcgata agttttatgc taatccgctg gcaaaaagtt tatcgccccg
    20521 tttatgtttg cacgcggagt cactaacaat tactcacccg attacaaggg agttgatgac
    20581 gtttactgct gagccgactt tttagcctcg ttcagtaggt gtttgtaata tgcccaatca
    20641 aaatattgcc ccgggtcgat tttccgttcc ggggcaatat ggcaatgccc ggtgatgcgt
    20701 tcatcggtaa tttgtggata gctttgctga atggctttgg tcaaatttgc caaagattgg
    20761 tattgagctt gagtaaacgg ctgattatta ctgccttcca gttcaatgcc aatcgaatat
    20821 tcattgcatt tctcccgccc ttcaaaacaa gagacgccgg cgtgccacgc tatatcgtta
    20881 aaattcacat attgcgtgat ttccccctcc ctattaatca aacaatgggc ggaaacccgt
    20941 agatctttga tttcttcaaa ataagggtga gcggttggtt cgagtttacc ttggaaaaac
    21001 agatcgataa aatttccacc aaattcttcc ggcggtaagc tgatgtagtg aataaccaac
    21061 aaggaaatat cctcttgatc aggacgttgg ctaaaatgcg gagacggcac ttgtttttga
    21121 ccggttaaac agccctgttc gatttttaaa tttggcatag tctaaatagg gtgaatacgt
    21181 taaaatatgg ctcattttac tagaaaaaga gaagaatatg ttaagttatc gccacagttt
    21241 ccacgcaggc aaccacgctg atgtgctaaa acacattgtc cagcttttga tcttgcgagc
    21301 attaaaagaa aaagaaaaag gttttttata tcttgatact cactccggtg tggggcgtta
    21361 tagtctgtta agttttgaat cggaaaaaac aggcgaatat ttagagggcg ttgcccgttt
    21421 atgggagcgt gatgatttac cggaagaagt ggcattctat attgatgagc tgaaaaaatt
    21481 aaaccgtggc ggcaagttaa agtattacgc aggctcccca ttattggcgg tacagcaact
    21541 gcgtgagcaa gaccgagcca ttcttaccga acttcacccc aatgattttc cgctgttacg
    21601 acaagaattt gccaaagcga aaaatgtgca aaccaagcga gaaaatggct ttcaacaatt
    21661 aaaatccgcc ctgccgccta aagagcgtcg aggttttgtg ttgattgatc caccttatga
    21721 attaaaagaa gattatgaat tggtggttaa agcgatagaa gagggctaca aacggtttgc
    21781 cactggtgtg tatgccattt ggtatccggt ggtgcttcgc caacatacca aacgtatagt
    21841 gcgaggttta atggataccg gcattcgcaa aattctacaa attgagcttg ccgttcgtcc
    21901 tgatagcgac caacgtggaa tgacggcaag tggtatgatt gtgatcaacc caccgtggca
    21961 gcttgaaacc cagatgaaaa aaatcctgcc atatttaacc gaggtgcttg tgccggaagg
    22021 aacaggttct tggaaggtgg agtggattac gcctgagtaa attaaatacg gatagcacaa
    22081 gcgtggacgc ttgcgccatc ataaattctg atttgcaata ttttttagaa aaataaccgc
    22141 ttgtcttatc aagaagtggg ggaaatataa aaggaaaaaa cgatgcaaca atacaaacac
    22201 gactttattg aatttgcctt aagccgcaat gtgctgaaat ttggcgaatt taccttaaaa
    22261 tcaggcagaa tcagccccta ttttttcaat gctgggcttt ttaacaccgg gcgcgattta
    22321 gccaaattag gcgaatatta cgccaaagcc attcaagcca gcggcattga gtatgatgtg
    22381 ttattcgggc cggcttataa aggcattccg attgcaacca cggttgccgt ggcactagcc
    22441 aacctgttcg atgtggataa accttgttgc tttaaccgca aagaggcaaa agatcacggt
    22501 gaaggcggta atttaatcgg ttctccctta acgggcaaga ttttgctggt ggacgatgtg
    22561 attaccgcag gcacggcaat tcgtgagtcg atggaaatta tcaatgccaa taatgcccag
    22621 cttgccggtg tgctgattgc gttaaaccgt aaagagaaag gcaagggcga gttgtctgcg
    22681 attcaagaag tcgaacgtga ttacggttgc caagttttct cgattgtgga ttttgatgat
    22741 ttggtagcat ttattgaaac gtcgccacaa tacgctcctt atttgccgaa aatgcgtgaa
    22801 tatcgtgaaa aatacggtgt ttaacttttg caaaaaaaca gcaaaaactc accgcttgtc
    22861 actctctaat ctcaccatta tgaatcactt tcatcttttg gtgagatttt ttcaattaaa
    22921 aagccgataa attgattgtg agctttagct aattggctta ggataaactc ctgtaataca
    22981 ggagttggag aactaaaatg gcacatcaaa aattaccttt tcacgcagac accgttggct
    23041 catatttgcg ttccgatgct tggaaaaaag ctcacgcaga ctataaagca ggcaacattt
    23101 ccctcgaaca acgtgatgaa attgtagaag cggaagtgaa aaaattagta caagcatcaa
    23161 ttagatgcgg gcattcaagt tgttacagac ggcgaatatc accgctcttg gtggcatatt
    23221 gatttcttgg aaaatctgaa cggcattgaa ggctatgtgc cggaaaaagc ctatgcgttt
    23281 aaaggggttg aggttcgccc ttataataca cgttgttgcg gtaaagtgtc ttggaatccg
    23341 aatcaccctt ttattgagca tttcaaaaaa ttcaatgcga ttgtaggtgg tcgtgcggtg
    23401 gcgaaattta ccattccaag tccaaaccaa ttaatgtacc cgattcagtg ggaccacggc
    23461 atttacccaa accgtgagga atttgccaaa gatgtgcaac aggcttataa agaggcgatt
    23521 aaagcgttct atgatgccgg ctgtcgttat ttgcaaattg atgatgtcta ttgggggtcg
    23581 ttgtgtaata acgttggtca accgacattt gaagccgata aagctcaagc ggtggcgaat
    23641 attcaagcca ttcttgccga taagccggaa gatttaacca ttaccaccca cgtttgccga
    23701 ggcaactata aatcttctta tttattgaca ggggcttatg atccgattgc cgacggctta
    23761 tttgctcaaa ccaactatga tgggtatttc ttagaatatg atgacgagcg ttcaggcggt
    23821 tttgagccgt taaaacattt tgccaacaac aaagggcgtg tggtattggg cttaattagt
    23881 tcaaaattcc ctgaattgga agataaggaa gcggttaaag cccgtattca agaagcggca
    23941 aaatatgtgc cgttagagca gctttgccta agcccgcaat gtggttttgc ctcaaccgaa
    24001 gagggcaata ttatgtcgga agcacagcaa tgggcgaaag ttcgtcttgt ggaggaaatc
    24061 gcccaagaag tttggggcga agattaatta gagtgaaaaa tgcccgtaac aagcgggcat
    24121 tttttgtgaa ttttttgcaa attcaagcca tttagcgaat gcggttaaaa ccttgttcta
    24181 aatcggcaat caaatcttcc accgcttcca agccaacgtg aatgcgaatt aatgttcccg
    24241 tcagtttgcg ttcaatcgcc gggcggattt tggcaatttc ttccggctga ttggcaagaa
    24301 tcagcgattc aaacccaccc caagaatacg ccattgaaaa cagttcaaaa tgctctagga
    24361 agttggctaa tttgtcattc gagagctttt cgcaaagttc aaatgaaaat agaccgcttg
    24421 aacctaaaaa atcccgctta aaaaattcgt gccccgggca gctttccaac gccgggtgat
    24481 aaactgcttt cacttcaggg cgttgagcca gccagttagc taccgcaatg ctactttgtt
    24541 cgtgctgttt taagcgaatg cctaaggtgc gtagcccccg agcggtgatg taagcggaat
    24601 cagcatccac catttgcccc attaaataag agccttcacg cagtttatcc caacaacggg
    24661 cgttagaaac cgcagtaccg atcatcacat cagaatgccc gactaaatat ttagtgccgg
    24721 cttgaatgga aatatcaatg ccatattcta aagcagggaa cagcacaccg gcagaccaag
    24781 tgttgtcgat cataatcacg atttctgggt tgatttcacg agcaacacgc acgagagtcg
    24841 gaatatcagg cacttccatt gttagcgagc tcggcgattc taaaaaaagc actttggtgt
    24901 tcggttgcac aagggctttc aagccttcac caatcatcgg gtcataataa gtagttgaaa
    24961 cacccatacg ttttaacagc gcattacaga attcttgtgt cggttcgtaa gctgcgcctg
    25021 tcattaaaac gtggttgcct tgttccacaa aagctaaaat cgcattggtg actgccgccg
    25081 caccgcaagg gtaaaggtag caacctgctc caccttctaa ttcacacatc gcttcttgta
    25141 atgaaaaatg agtgagagtg ccacgtctgc cataaaataa tgctcctttg tagcggtttt
    25201 gtgtagcgtg ttttttctct tctaaggttt caaacactaa agatgaagca cgctgaatca
    25261 ccgggttaac tgctccttgt gtgttacgtt ttttacgccc tgtatgaaca agtttggtgg
    25321 aaagattttt atagttagac ataacttttc ctaaagtaaa atgcataggg gcaaatcaac
    25381 atttgcccct ttattaataa ttaacgaaac ataaagttat ttctttgacg gctacgttta
    25441 aattggctga ttagcacaat gaccgcaaca attaagtaaa ccgcaaaagt aaagattagc
    25501 cattgtgcca ttgaaaagcc gaacatttcc cattggcttt ggctacaatt aaccggaccg
    25561 ggggcaaaca cttgtggtag ccattggtca agcggcaagg tttgcgggaa attaacttta
    25621 aattcgcatt gattccatgg tgatggattg acctgataat cgtggtgttt gattgaaagt
    25681 actagccctt taaatgcgct accaagccaa attagaattg ccaagtagcg aataatcgca
    25741 tatctattac caagaaatcc taaaataccg gcaaataaaa taccaaataa agcaactcgc
    25801 tcataaatac acattacaca aggtactaat cccatcccat gttggaaata aagcgctgtg
    25861 ccttcaagta taagacagct taacattagt aaaaaccatg cactgcgaga ttgtgataga
    25921 tttttaaaaa aatagagcat agttattcct cattttgtga acttaaggca ttctacctta
    25981 tttggtatga gttatctata aactaacgtg taataaacca tccccaattt atcattactt
    26041 cagtcataga aggtagtaag aattctaacc ctaagaaacc gacaatagat agaacaatgg
    26101 tataaggtaa tgccatatag accattctgc cgtaagacag tttaattaac ggcgcaaagg
    26161 aggacgttaa taagaataag aaagcagctt gtccgtttgg ggtagcaaca gaaggaagat
    26221 ttgtgccagt attaattgca actgcaatca ggtcgaactg ctcacgatct ataatgccgg
    26281 catctagtgc ggttttagct tcattaatgt aaacagtacc gacgaagacg ttatctgaaa
    26341 tcatcgagag caaaccattg aaaatataga ataatgaaag ctgtgaatgt ggttcggcag
    26401 ataacacaaa ggcaatgatc ggctcaaata attttaaatc aataatcacg gcaacaaccg
    26461 agaaaaacac aataagcaat gcagtaaaag gcatagattc ttggaatgct ttccctaaag
    26521 tgtgttcatc agtaatgcca caaaatgcag tgcaaataat gatgatggtt aagccaataa
    26581 tccctacatc ggcaagatgt agcgctaagc caataattaa ccaaattcca gcaatggctt
    26641 gcaccagcat ctttaagcga tcttgtttcg tcattttttg ttcttttagt tggctatagc
    26701 gagcgagtac gacccaaact ttgctaggaa gccggtctcc ataaccaaat aatttatatt
    26761 tttctacaag aaagcaggtc gcaatcccac aaattaacac gggtaagcta actggtaatg
    26821 ctctaagtaa gaattcgata aatccccatt ccgcttggga ggcaataatt aagttttgtg
    26881 gttctcccac catggtcatt acgccaccta aagctgagcc aataccggcg tgcatcaata
    26941 aacttcttaa aaaaccacga aattgctcta aaatttcttt attagagatg attttttcat
    27001 cattggtaat atcagtagaa tcttcaaagt tattacctga tgcgacttta tgatatacgc
    27061 cgtagaaacc tgttccaacg ctaatgatta cagcaataac cgttaaagca tcaagaaagg
    27121 cggataaaaa agcagcgctt aagcagaaag aaagggaaag aatttttttc gaatgaatgg
    27181 cgacaagcag tttggtgaaa atataaagca ataattgctt cataaagtaa ataccggcaa
    27241 ccataaacat taaaagaaga ataacatcaa agtttgccat aatttcttct ttaatgtggt
    27301 gaggatttgt cataccgatt acaactgctt caatcgctaa taaaccacct ggctgtaatg
    27361 gataacattt taatgccata gagagagtaa aaataaattc agcgactaga aaccagcctg
    27421 caacaaaagg attgataaag aaataaatga gaggattgat aattaaaaat gccaaaatgc
    27481 acaatttata ccactcgggg ctttttccta agaaactttt gaacagagca tcaatgctac
    27541 tcatataaag gacctcaaaa tttgtaaaca gatattacaa ttgtaatata gtttagatta
    27601 aaggataata gtattactga actttttagt cgcaataatt gattagaaat aaagaatagt
    27661 tagattttag ataagcatat tttttgcttg gggggcatta atgggtcaca gtgatatttt
    27721 aaaagcgcaa agcccggcag cgttagcgga agaatatatt gtaaagagta tttggaataa
    27781 tcatttccct gccggctctg atcttcctgc cgagcgagag ttagcagagc gcattggggt
    27841 aacaagaaca actttacgtg aagtactaca acgtctagcg cgagaaggtt ggttaagtat
    27901 tcagcacggc aagccaacaa gagtgaatga tatttgggaa acttcggggc ctaatattat
    27961 tggcactatt attaagctag ataaaagcta tcttccagtg gtgattgcca atgtggtgtc
    28021 attacgtact cgtatggcgg aggcttatat tccagaagcg atttaccttg ctcctgaaga
    28081 aagtgctaaa ctctttgatg gactagatga attagaaaat acagcagctg cttatgctga
    28141 atttgattat aagttattca gacaatttac ttttttagcc aataagcctg tgtatgcgtt
    28201 gatcctaaat agctttaaat caatgtatca tcaagtcgca aaaattttct ttgctgatga
    28261 aaataatcgt caattaacgt taagctttta ccgttcatta ttatgtactt gtcttgcaaa
    28321 agatagtgaa aaagcagccg cttgtatggc taaaaatcgc caatctagtg gtgaaatttg
    28381 gcaaaaatta tccgctaata ttcctgaaag ctttggtcag ctttaacaga aggtagaatt
    28441 ttgaacgaaa ttatttttag cttagaaccg caagataatg ctcgtctgca atcgctttgt
    28501 ggtgcatttg atgagcattt agccttaatt gaaaaaagtt ttaatctcat tattgctcga
    28561 acaggcttca actttacgat tcaatcggaa gatgacaatc actattctgc taccttggtt
    28621 caaaatagtg tgaagctgat taagcaactg tataatgaaa ctgccccgat taaaggcaaa
    28681 attaaggaat tggacttaga agatatacat ttggcgattc aggaaagccg aatgctacta
    28741 caaaaccaat ggcaagccgg ctcgcaaggc gaaatagcga ttaaaaccaa gcgaggggtg
    28801 attaaacctc gtagcgaaca tcaacaagcc tatttacgaa atatattaag ccacgacatc
    28861 agttttggta tcgggcctgc tggcacaggc aaaacctttt tagcggtagc ggcagcggtg
    28921 gaatcgcttg aacgccaaga aatccgccgt attttactta cccgtccggc ggtggaagcc
    28981 ggtgaaaagc tcggtttttt acccggcgat ttagggcaaa aaattgagcc ttacttacgc
    29041 ccgttatatg atgccctgtt tgaaatgctt ggctttgaaa aagctcaaaa gttgatggaa
    29101 cgtggtgtga ttgaaattgc cccacttgct tatatgcgag ggcgtacttt aaacgatgcg
    29161 ttcatcattt tagatgaaag ccaaaacacg actaccgagc aaatgaaaat gttcttaacc
    29221 cgtattggct ttaattccaa agcggtgatt accggcgata ttacccaagt ggatttgccc
    29281 cgtagccaaa aatcaggctt aaaacacgca atggaagtgc taaaagaagt gccggaactc
    29341 agctttaatt tctttgacag caaagatatt gtccgccacc ctgtggttgc caaaattgtg
    29401 caagcctatg atgcgtggga agcggttgat gaagagcgta aagaacagcg aaaactggaa
    29461 aaattagctt tagagcaaga aaaaattctt gctcaagctg aaatgttata gcttacaagc
    29521 ggtcatattt cgctaatttt ttgcaaaaaa tcgctgaaat ttcaccgctt atcataacag
    29581 ttgttcaaca aaaaagcggg aagttaattc ccgcttttct ttatcttatt gtttcattat
    29641 aagatttctt ttgctttagc aaccacgttt tcaacggtaa agccgaagag tttgaataat
    29701 tgatctgctg gtgcggattc accaaagcta ttcataccta caattcgacc atcaaagccg
    29761 acatatttat accagaagtc agctaattga gcttcaatcg ccacacgttt agtgactgaa
    29821 cgtggtaata ccgattcacg ataggcttca tcttgtttgt caaacacgtt ggtgcttggc
    29881 attgaaacta cacgcacttt cacgccttct gcatctaaca catcagcggc tttcattgct
    29941 aaatctactt cagaaccggt tgcaattaag attaaatccg ggcaactgcc tttttcgcaa
    30001 cattcacgca agatatagcc accacgagag atgttcgcta attgctccgc agtacgttgt
    30061 tgttgagcca gattttggcg ggtaaagatt agtgctgtcg ggccgtcttt acgttctacc
    30121 gccgctttcc aagcaacagc agattctact tggtctgccg gacgccaggt ttctaagttt
    30181 ggaatttggc gtaatgaagc agtttgttct accggttggt gggtcgggcc gtcttcacct
    30241 aaaccgatgg agtcgtgtgt ataaacaaat aaggcacgtt gcttcattaa ggctgccata
    30301 cgcaccgcat tgtgtgcata ttcgtagaac attaagaagg ttgcaccgta aggaatgaaa
    30361 ccaccgtgta gggcaatccc gttcataatc gcagacatac cgaattcacg cacgccgtag
    30421 ttgatgtagt taccatctac attgtgttcc gcacgaatcg gttttgagcc agaccataag
    30481 gttaagttag agcttgctaa gtcagctgag ccgccgagga attcaggtaa gattggcgcg
    30541 taagcttcga ttgcattttg tgatgcttta cggcttgcaa tggttgccgg atttgcttgt
    30601 aatttttcaa taaaagcttt gctttcagct tcccagttag ccggtaattc gcctgcgtaa
    30661 cggcgtttaa attcagcggc tagttcaggg tatgccgctt cataagcagc aaatttagcg
    30721 ttccaatctt tttctgctaa tgtacctttt gcttttgcat cccactctgt ataaatttca
    30781 gctggaatca caaatggggc atgttcccaa cctaaaaatt cacgagcggc ttggatttca
    30841 gcatcaccca atggcgcacc gtggcaatcg tgagagtttg atttatttgg tgaaccatag
    30901 ccgataatgg ttttacaaat aattaaagtt ggacgctcgg tttcggcttg tgcattttca
    30961 atcgcaaatt tgatttgttc tgggttatgg ccatcgacat tacggataac ttgccagcca
    31021 taagactcaa agcgttgtgc ggtatcatca gtgaaccaac catcaacgtg gccgtcgata
    31081 gagatattgt tatcatcgta gaaagcaatc agtttgccta agcctaatgt accggcgaga
    31141 gagcaagctt cgtgtgagat accttccatt aaacagccat cgcctaagaa agcgtaagtg
    31201 tagtgatcga caattttatg accttcacgg ttaaattgtg ctgcaagggt tttttccgca
    31261 atcgctatac cgaccgcatt ggtaatacct tgacctaacg ggcctgtggt ggtttcaaca
    31321 cccggtgcat aaccatattc agggtgacca ggtgttttag aatgtaactg acggaactgt
    31381 tttaaatctt caatagagag atcatagccg gttaaatgaa gtaagctata gattaacatt
    31441 gaaccgtgtc cgttagacag aacaaaacgg tcacgatctg cccatttagg attagttgga
    31501 ttgtgtttta aaaaatcacg ccataaaact tctgcaatat cagccatacc cattggtgcg
    31561 cctgggtggc ctgagttagc tttttgtaca gcatccatac ttaaaaaacg aattgcattc
    31621 gctagcactt tacgttctgt catttgtgtt actcctaatc gagaatgtta tataaaatgg
    31681 aaaggatatc gaattggatt ctacactatt ttgctagaaa aactcaaaaa tggaaatgag
    31741 aaatgtgatc tgtatcacaa aaaatgatta aattgtgatt tgttttgatt ggatttgatt
    31801 ttaatagacg gttttttcct aatacaatat tttcttgata aagcgaatgt ttagtagttg
    31861 atctaggcaa caaatttatc taaaatacgc actctttttg gcgttgagca tttgctcaac
    31921 atttttatta attacatatg gtacctatca gcggtagaga ttctaacaag ataggcggcg
    31981 atatggcttc ttatgaggtt ccccaatgaa acaaggtatt cacccagaat ataaagaaat
    32041 tacggcaact tgctcttgcg gtaatgtagt taaaactcgc tcaacagtgg gtaaagattt
    32101 aaacttagac gtatgtggca actgccaccc gttctatact ggtaaacaac gtgttgttga
    32161 caccggtggt cgtgttgaac gctttaacaa acgtttcagc atcccaagct caaaataatt
    32221 tgattattgc aaaccccgct aatgcggggt tttgtttttc ttatatatcg aattaacaag
    32281 cggtgtattt ttctatcaat tttgcaaatt ggtgatttaa ccattttgca ggagctacca
    32341 gagaaaaacc tcgagtatca ttattatcct cggtccattt atctgcgatc accataaaag
    32401 tttcaacatc tttcttaggt tttggatacc agcgtgcaat attagctgga tgattggcat
    32461 aaaatgagag caatttcttg cctaatgcac aagaaatatg gacaccacct ccatcaactg
    32521 caattacaat atcagcagag tttactaatg cacaataacc taaaatatca ctattaggtg
    32581 ctaggcttat ttcaaatggg gctttaattt tcgacaaata ttcggcacta ttggttgtat
    32641 tggtcagcaa acaactaata tgttgaacat atcttttatc aatcatagat aatagctctg
    32701 ataattcttg agtagaaatt tcacgcatac taccttgagg attcaatagt aatcgaattt
    32761 tcttctcttg ccatagcgta tttgcaaaac tgcttagttc attaggaatg tttaaattat
    32821 aattgacctg atttttttct aaaaaatcag caaaaatagc atagttgaga tagtcagcaa
    32881 aatgaacctg ctttggaaag acagtggtga aatcgt
//
LOCUS       DANLXD010000013        32660 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.013, whole genome shotgun sequence.
ACCESSION   DANLXD010000013 DANLXD010000000
VERSION     DANLXD010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 32660)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32660)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32660
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.013"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..726
                     /locus_tag="PXD18_000493"
     CDS             <1..726
                     /locus_tag="PXD18_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL6300956.1"
                     /translation="SVVADKINLHFEQGKIYTLLGPNGAGKSSLLKTLFGEIAHQGTI
                     DFDGNKLTSSHLHSWRKEIGYMPQDTQVEASLSALEVILLGQLDSLNMYISDELLNEA
                     VDIMDKLGISHLAHQDIMRLSGGQRQMVMFAQVLLRKPHILLLDEPVSALDMYHQINL
                     LEYVNAYTRANNLITIMVLHDLSLAAQFSDSVMLLSEGKFKHKAELVICWNAILFRDS
                     IMSILRFYMMETARRLSARFANV"
     gene            complement(817..1920)
                     /locus_tag="PXD18_000494"
     CDS             complement(817..1920)
                     /locus_tag="PXD18_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6300957.1"
                     /translation="MKKLLLNSVFAATLLAFGATANAEIKTITDVLGREVKVDVPAKR
                     VALTFYYPDYIAVTGVENFDKVVGISREFWEKFNPGSWALFAEKMPNLKNIADLGYVN
                     SGTFSTEKTIALKPDVLVLPEIQYQALASEISRIEQAGIPVVVDFNKQTIENHTKSVR
                     VFGQLTGTEERAEKIAKEYEEGIADIQSCIDNAKVSKPKIYAEFGNKGPKEHSFTFGK
                     NMWGAIAETVRGDNISAPFVENWGQINPEQVLVSKPDVIMISGTELGNDTNPEIMSMG
                     INIEEADAQKRLKGFIERTGWKELPAVKSGRVYGLYHTASRSISDLASAQFMAKALYP
                     ELFKDIDPEKTYLDFHNNYLPITPKGTFFMQLK"
     gene            complement(2107..3114)
                     /gene="lipA"
                     /locus_tag="PXD18_000495"
     CDS             complement(2107..3114)
                     /gene="lipA"
                     /locus_tag="PXD18_000495"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HDL6300958.1"
                     /translation="MATSTAQTTATATVKKMSPFKMEKGVKYRDAAKTSVIQVRNIDP
                     DQELLKKPEWMKIKLPANSAKIDSIKNGMRRHGLHSVCEEASCPNLHECFNHGTATFM
                     IMGAICTRRCPFCDVAHGKPLPLDPDEPRKVAETVQDMKLKYVVITSVDRDDLPDRGA
                     AHFSATVREIKALNPHCKVEILVPDFRGRVEQAVAILKENPPDVFNHNLENVPRLYRE
                     VRPGADYKWSLELLKIFKQEFPHIPTKSGLMVGLGETNEEILEVMQDLRDHGVTMLTI
                     GQYLQPSRHHLKVERYVPPAEFDMFREEAEKMGFEHAACGPFVRSSYHADLQAKGELV
                     K"
     gene            complement(3129..3782)
                     /gene="lipB"
                     /locus_tag="PXD18_000496"
     CDS             complement(3129..3782)
                     /gene="lipB"
                     /locus_tag="PXD18_000496"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HDL6300959.1"
                     /translation="MKLIIRQLGIQPYEEIWHQMQSFTDSRDGNTDDEIWLVQHPAVF
                     TQGSAGKPEHLLNPTNIPVVQSDRGGQITYHGEGQQIMYVLIDIKRLKSLGKEVSVRD
                     LVTALEQTVVQTLAEYGIESYPKADAPGVYVDGKKICSLGLRIRKGCSFHGLALNINM
                     DLTPFQNINPCGYAGLEMCQLSELVHRPDLRCEEVAPKLVAHFSTILGYNNQQIINN"
     gene            complement(3844..4143)
                     /locus_tag="PXD18_000497"
     CDS             complement(3844..4143)
                     /locus_tag="PXD18_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HDL6300960.1"
                     /translation="MSQPKAINLQDLPQAKLKDLLEFPCHFTFKVVGANREDLVDDVV
                     VVTQKYAKGDYNPRQQKSSKGTYNSVSIDIVAENIEQVETLYTELAKINGVRMVL"
     gene            complement(4311..5489)
                     /locus_tag="PXD18_000498"
     CDS             complement(4311..5489)
                     /locus_tag="PXD18_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HDL6300961.1"
                     /translation="MKKTLVKAMSVVGFAVSSIAYADLNTNFNLSAPQINAQTYILMD
                     YNSGEVLVSLNPDQRQYPASLTKMMTSYVVGEALKSGKVQNSDMVIVTENSWAQKFPG
                     SSLMFLDLNSKVSVGELMKGLIIVSGNDASVALAEHVSGSQAAFINEMNKYAQQFGLK
                     NTHFTTVHGLDDPEQYSSARDMAIIGSHIIRDQPEEYKIYAEKEFQYNIKKPQPNRNG
                     LLWDKTIQVDGMKTGHTDKAGYNLVASAINPNTRLISVVMGVPTYKGREVESKKLLQW
                     GFANFETIKSIPAAQSVAEQSVYYGEVNKVQLGSVQDSFVTIPKGRSADLKARYELEK
                     KNLEAPLAKGQVVGKMIYQLDGKDVASTNLQVLQDVPEAGIFGKAWDWIALTVKSLFD
                     "
     gene            complement(5503..6162)
                     /locus_tag="PXD18_000499"
     CDS             complement(5503..6162)
                     /locus_tag="PXD18_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HDL6300962.1"
                     /translation="MRLGKIVTLLLAGFLTFSSLNSLAATKNTKAKSSILAKKQATSK
                     AIKKVGISKVKKKEVVAKATKKKTISTVTTKPIKSTKKLARKVVKKTVTAKKKLVKKQ
                     HKPLVKKHFQTGVASYYANYFNGRRTANGETFNNAKMTAAHRTLPFGTLIEVTNLRNG
                     RSVVVRVNDRGPYAHARVLDLSSAAAKKIGMHHSGTARVKIAIVDKSKLGSTNQFYVM
                     N"
     gene            complement(6254..7381)
                     /gene="rodA"
                     /locus_tag="PXD18_000500"
     CDS             complement(6254..7381)
                     /gene="rodA"
                     /locus_tag="PXD18_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HDL6300963.1"
                     /translation="MNSGFKKLFWKIFSLDLLLLSGLLAITGYGLLVLYSASGANERM
                     FTSRLIQVSLGLGLMLIMAMVPPRFYQKVSPYLYIFCLILLILVDLVGETSKGAQRWL
                     NLGFVRFQPSEIAKLAVPLMVATYLGKRPLPPSFKDTFIALAIIIVPTLLVAIQPDLG
                     TSILVCSAGIFVLFLAGLSWKLIGAGVVFLAGFIPIMWFFLMHDYQKTRVMTLIDPNK
                     DPLGAGYHIIQSKIAIGSGGINGKGWMEGTQSQLEFLPEPHTDFIFAVLSEEHGMIGV
                     LILLAIYLFIIARGLVIGTKSDSAFGRILSGGTALLFFVYVFVNIGMVSGILPVVGVP
                     LPLFSYGGTSYVTLMAAFGLMMSTYVHRKRVGSNNPYDKLK"
     gene            complement(7374..9323)
                     /gene="mrdA"
                     /locus_tag="PXD18_000501"
     CDS             complement(7374..9323)
                     /gene="mrdA"
                     /locus_tag="PXD18_000501"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDL6300964.1"
                     /translation="MFGKLAKFTASNQREKVRDGQAESNLYARRALVAFLGVLALSGV
                     LLTNLYHLQVVNYEDYQTRSNGNRIKLLPVPPARGLIYDRNGKVLAENLTYFGLFIVP
                     EKTENIEQTLTELKDIVGLTDEDIENYHKEKKRSSRYTPIMLKGNLNEAQMARFAVNQ
                     YRFPSLDVQAYYKRNYPYGELLTHIIGYVAKINENDKKKLQEAGKFGNYAGSHDMGKL
                     GIEKFYEDQLHGVTGFEEVEINNRGKVIRKLRDQAGVAGSSIRLSIDVELQQYVMSLI
                     AKHKGAVVVLDPRDSSILAMVSNPSYDNNLFVGGISGQDYKALLDDPTRPLYSRTTQG
                     TYPPASTIKPFMAVAGLEEGMITPSTTISDPGYWILPGTTQRYRDWKRSGHGATNVNK
                     AITESSDTFFYQLAYKMGIDKMSDWMKKFGFGVKTGIDIFEESAGVMPTREWKQKRYK
                     KPWVQGDTIPVGIGQGYWISTPLQLAKATAVLINNGRVNTPHLMLEVQSSNSVTPYQD
                     PLLYEDIKGVPDVYWNLAKQGMYNVNHAANGTARKVFAGAFYHSAGKTGTAQVFNLNG
                     KNYDKNAIKKELHDHAWFIGYAPYEQPKIVVALILENAGGGGSAAAPVARQIMDYALR
                     KGIGEQPDSQNSEQNKPLVTEEHHE"
     gene            complement(9347..9814)
                     /gene="rlmH"
                     /locus_tag="PXD18_000502"
     CDS             complement(9347..9814)
                     /gene="rlmH"
                     /locus_tag="PXD18_000502"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010618862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HDL6300965.1"
                     /translation="MKIQLIAVGTKMPAWVTTGFEEYQRRFPKEMPFELVEIPAGKRG
                     KNADTKRILELEGKAMLAAAGKAKIVTLDIPGKAWTTEQLATQLEGWKNDGRDVALLI
                     GGPEGLSPECKAAAEQSWSLSPLTLPHPLVRVVVAESLYRAWSVTINHPYHRE"
     gene            complement(9891..10205)
                     /gene="rsfS"
                     /locus_tag="PXD18_000503"
     CDS             complement(9891..10205)
                     /gene="rsfS"
                     /locus_tag="PXD18_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HDL6300966.1"
                     /translation="MEQNLVEFLTKTLDDLKAQDILAIDVKGKSSITDTMILATGTSS
                     RHVASTAERLITEAKQAGFEVFGDEGKAVADWIVVDFGKAMVHLLQSDSREMYQLEKL
                     WA"
     gene            complement(10373..11242)
                     /locus_tag="PXD18_000504"
     CDS             complement(10373..11242)
                     /locus_tag="PXD18_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6300967.1"
                     /translation="MFKKYFGEIILFLVTFIAAAGWFFSKHALVGLPPIGFMGGRFIL
                     ASLILLPFSYRELYRLDKVQVKYSVITGLTYGIYTIFWVLGLAFSTVFGEGAFLVSLA
                     MLIAPLLSWLIFKHTPPKIFWLALPIALSGLYFLSAEKGIFHFSLGSTIFLVSSVFGA
                     LYFVLNNQYAKQVSLFPLITIQLAIVGAVCSLYSYFMESWHFPILTEVWLWFAASVLI
                     ATNLRFLMQTLGQKYCHIGTSALIMLLEPVWTLLLSVMLLGEQLSATKWLGCSLILIA
                     LIIYRLPILRLKK"
     gene            complement(11293..12477)
                     /gene="uxuA"
                     /locus_tag="PXD18_000505"
     CDS             complement(11293..12477)
                     /gene="uxuA"
                     /locus_tag="PXD18_000505"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HDL6300968.1"
                     /translation="MEQAWRWYGPNDPVSLDDVRQAGATGIVTALHHIPNGQVWSVEE
                     INKRKALLAEKGLVWSVVESVPVHEEIKTQTGNYQQWIDNYKQTLRNLASCGIDTVCY
                     NFMPVLDWTRTDLEYEMPDGSKALRFDQVAFAAFELYILKRPGAEATYSSAEQAEAKA
                     YFEQMSDADIAKLTKNIIAGLPGSEEGYTLEEFQAQLDRYQGLSAEKFRTHLAYFLNE
                     IVPVAQEVGIRMAIHPDDPPRPILGLPRIVSTIEDMQWFVETQPLAANGFTFCTGSYG
                     VLAENDLVKMAEQFADRIYFAHLRATQREENPQSFHEADHLAGDVDMFGVVKALLTEE
                     YRRKANGDHRLIPMRPDHGHQMLDDLKKKTNPGYSAIGRLRGLAEFRGLELALKKVYF
                     ND"
     gene            complement(12507..13268)
                     /locus_tag="PXD18_000506"
     CDS             complement(12507..13268)
                     /locus_tag="PXD18_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HDL6300969.1"
                     /translation="MQNSSRTYTKIGKILKEEIAQGKYRVGDKLPTERDISERFEVSR
                     TIVREAIVMLEVEKLIEVKKGSGVYVIRVPELFPEDFPEEKDNELRDVGPFELLQARQ
                     LLESSIAEFAAQQATKQDIQVLRNILESEKKLLLEKMDDYSADKEFHLALAHMTGNDV
                     LIQLQEQLWRYRFNSAMWAQLHSRILQHDHHHLWIEDHERILNAIQRKNPALARKAMW
                     QHLENVKTKLLELSDVEDPKFDGYLFNVNPVVVGI"
     gene            13432..14457
                     /locus_tag="PXD18_000507"
     CDS             13432..14457
                     /locus_tag="PXD18_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HDL6300970.1"
                     /translation="MEKPLKSVCLVEPNKVGIQTVSYPVKGENDVLIKVEGMGICGSD
                     IGAFRGTNPLVTYPRILGHEIVGTVIESGKGMPNNINVGDRVIIEPYIYCGHCYPCSI
                     GRTNCCESLKVLGVHIDGAMQEVVRHPAHMIIKTPDMPIHELALAEPLTISLHAIHRT
                     KVKAGEHVAIIGAGAIGLMAALVAKAYGATPILIDILDKRLDYAKSIGIPHTINPTKE
                     NDLEAIKSITNGRMAEVVIEASGANVAVQNTLKYTSFAGRIALTGWPKTETPLPTNLI
                     TFKELNIYGARTSKGAFEEALELLASRRIEPKDIISKVITFDEIPHYIEELSANPDDY
                     LKIIAVF"
     gene            14486..15469
                     /locus_tag="PXD18_000508"
     CDS             14486..15469
                     /locus_tag="PXD18_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HDL6300971.1"
                     /translation="MKLKTFTKALLISSLMFTGSAFAKTIIKIGHYNSDVHPSNIALQ
                     EYFKKTIEEKTEGRYEIRIFPNNQLGGEDQIVNGLRNGTIEGGITGLLLQNVDPIFGV
                     WEWPYLFKDNAEAKKVLESPIAQEIGEKMEKYGIKLLAYGMNGFRVISSNKKVENFDG
                     FKGLRLRVPLNSLFVDWAKAMHINPQSMPLSEVFTALEQKVIDGQENPYMLIKDSGLY
                     EVQKYIIESNHIFSPGLLQLSLKTWNKMSKEDQTIFLEAAKLYQEKEWELAMKMEQDV
                     KDFFHKNGKEVIVPSEQFKADMLKASETLYQNFYQKYDWAKDVISKIHAAK"
     gene            15530..16009
                     /locus_tag="PXD18_000509"
     CDS             15530..16009
                     /locus_tag="PXD18_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HDL6300972.1"
                     /translation="MQISTALDRTLKLLAIIALSTMIILVFFNAVLRYFFDSGIAWSE
                     EFARICFVYMIFLGIILVAKERGHLTVDIVVSALPAKVQMYLLFFADILVLVALSFIT
                     YGAYQLMLLTYTQKMPATEISSAFLYFAAVISSISYFAIVFTNLWKHIRLAFIKEEK"
     gene            16012..17283
                     /locus_tag="PXD18_000510"
     CDS             16012..17283
                     /locus_tag="PXD18_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005668000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HDL6300973.1"
                     /translation="MLWLFLGSLFLFLFLGVPVALSMLLSASFMLWKMDMFDAQLITE
                     NFVMGTNNFPLMAIPFFMLTGEIMKHGGISERIINFAMSMVGHIKGGLGYVVIISGLI
                     FAGLSGSAVADTAALGAILIPMMVARKYDVARSTGLICAAGIISVVIPPSIPMIVYGI
                     TAGASITKLFMGGMVPGFLMVLGLWLVWKFLYRNEEQTVEPKKTGKERWAAFKSAFLP
                     LLLPIIIIVGLRGGIFTPTEAGVVAAIYAAIISIILKGLTLDKIQDVFLGTIKTTAMV
                     MFVAAAAMISAFAVTVAQIPMELVEFIKGITDSPTVLMFVIMIFLLLVGCVMDLIPAV
                     LIFVPVLLPLLRAYNIDIAYFGIMMVINLSIGLITPPVGTVLYVGSGIAKIGIARLTK
                     GIYPFLLVYAAILFLLILFPEIIIVPMNWLS"
     gene            17295..18140
                     /locus_tag="PXD18_000511"
     CDS             17295..18140
                     /locus_tag="PXD18_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL6300974.1"
                     /translation="MSIAQNHNFKDKVVVITGAGGVLCAYFAKEIAKTGAKVALLDIN
                     LEAAQNFASEIADEGYIAKAYQTNVLELESIKQARDEILKDFGTCDILINGAGGNNPK
                     ATTDNEFHDINLPENTKSFFELDKAGIEFVFNLNYLGTLLPTQVFAKDMLGKEGANII
                     NISSMNAFTPLTKIPAYSGAKSAISNFTQWLAVYFSKVGIRCNAIAPGFLVSNQNKAL
                     LFNADGTPTARANKILTNTPMGRFGQADELVGAILFLMDHHYSSFINGVVLPVDGGFS
                     AYSGV"
     gene            18157..19104
                     /locus_tag="PXD18_000512"
     CDS             18157..19104
                     /locus_tag="PXD18_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HDL6300975.1"
                     /translation="MKKLAILGECMIELNGEPFGEMHQTYGGDSLNTATYLARVSSPE
                     QIEVRYISALGTDKLSQGMLAAWQVDNINTDFVLRDEHRQPGLYLIQLDKQGERTFLY
                     WRNQSAARYLLQHPGYPKALSALNEVDMVYLSGISLAILPENDRTLLIAQLRELKTQG
                     VKIAFDSNYRPKLWESVAAAQAHYAELLQLVDLALVTFDDEQLLWGDVNEQATFDRLT
                     QYGIQTIVVKQGSLGATVLQNGERTFVPTVAVEKVVDTTSAGDSFNAGFLNGYLLGKD
                     VVTCCQQGNAVAGIVIQHKGAIIAKSATTHLKSQFEQSI"
     gene            19192..19830
                     /locus_tag="PXD18_000513"
     CDS             19192..19830
                     /locus_tag="PXD18_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HDL6300976.1"
                     /translation="MRYTTEQIIEKLRQLKVVPVIALDKAEDILPLAKTLSENGLPVV
                     EITFRSEAAEEAIKLVQANYPEVLIAAGTVLTKEQVLTAKNAGADCIVTPGFNPTIVK
                     YCQVLGLPVTPGVNNPMAIEAALELGIQAVKFFPAEASGGVKMIKALLGPYGNLQIMP
                     TGGISPQNINDYLAIPNVVACGGSWFVEKSLIKEQKWEEIGKLTKEVVELVK"
     gene            20054..21508
                     /locus_tag="PXD18_000514"
     CDS             20054..21508
                     /locus_tag="PXD18_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL6300977.1"
                     /translation="MKKIVSTLLILTSNLAFAETTPAQLQEKMDNQRMQKNLHTLEKP
                     EPQAKPQAVNAQAHRQSISISSQQLLQQPELLNSAMLTALVTNHTENVQFLLPIYQQL
                     PASKQNSEVVQWAEAVNAKAKQNYSEAIKGYRQLLAKYPENQPIRMQLAVALFENREN
                     EAAEAQFYKLQADKLPQEIANAVNSYLEAIGKQDQWSFQGGLTYLNDPNINNAPNAGT
                     TYGNWTAPKKESAQGVGFHFEADKKWSWGNGFFHEFRLNGNGKYYWNNKKYNEYSLRE
                     SLGLGYQNAKQKITLLPFFEQMWYAGGSSQTESTKRYSNAGGVNARWQYWITPQWQSA
                     ISYEYAEQRYTRRQHLDGNYHFIAPSLYFYPNSRQYWFVGANFNRTSPRDLDDSFIRR
                     GVSIGWGQEWKNGLSTQLSASYARKQYRAPMPIFQITQRNSEYGVQASIWHRALHFKG
                     ITPRLTWQYNKVKSNHSFYSYDKNRVYIEFSHTF"
     gene            complement(21556..24153)
                     /gene="mutS"
                     /locus_tag="PXD18_000515"
     CDS             complement(21556..24153)
                     /gene="mutS"
                     /locus_tag="PXD18_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HDL6300978.1"
                     /translation="MTQDFSTHTPMMQQYLQLKAQNPDILLFYRMGDFYELFYDDAKR
                     AAALLDISLTKRGQSAGEPIPMAGVPYHAVEGYLAKLVALGESVAICEQIGDPATSKG
                     PVERKVVRIVTPGTVSDEALLPERQDNLVAAVYEEKGTFAIATLDMTSGRFLISELAS
                     KEALSAELQRVQPAEILYAEDFSAASILTNYKGLRRRPVWEFELVTAIQLLNRQFGTQ
                     TLAGFGVEKAVVALCAAGCVLHYAQETQRTALPHINAIHLAQHSDTILLDAATRRNLE
                     LTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPIRDCGKLQARQKAITALIQYER
                     MSDLQPLLQQVGDMERILARVALRTARPRDLTRLRTALAQLPEIAKNSQNLTASIDQL
                     LAQLADFSPLHDLLERAIIENPPQLIRDGGVIAEGYNAELDEWRQLSDGATQYLENLE
                     IRERESTGIDSLKIGFNAVHGYYIQISQGQAHKAPIHYVRRQTLKNAERYIIPELKTY
                     EDKVLKAKGASLALEKQLYDELFDVLMPRLGELQLAAMMLSELDVLTNLAERADSLGY
                     VCPSFSPMRMVNIKGGRHPVVEQVLTEPFIANPVFLNSQRHLLIVTGPNMGGKSTYMR
                     QIALITLMAYIGSFVPAESAEIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQ
                     ATENSLVLIDEIGRGTSTYDGLSLAWACAEWLAKKTQSLTLFATHYFELTGLPNQLKG
                     VANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVAALAGVPKQVIQLAKQRLAHLEEI
                     SHQTKQANEHPQADLLFSDGFDLQKNEAIQPLVVENEVEKALKALQPDELTPRQALDE
                     LYRLKKLLG"
     gene            24303..24866
                     /locus_tag="PXD18_000516"
     CDS             24303..24866
                     /locus_tag="PXD18_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5358 domain-containing protein"
                     /protein_id="HDL6300979.1"
                     /translation="MLRKIVLLSTGLLLAACSSNEPQQPEAFPGEFANADYVLSEENA
                     QKWVIASEQAKQCIYPNLTRIQQEHFSKEDSYIFSQYVFFYPLEEIIGEQYVKIIQND
                     EKSMGYAQYLFKKLKNNEAVEALPKKQCATLRTNAKNDLAVVKGQYQSGMIEETNSQE
                     GKSGDKVATNDNKFFFDIIKWGSMLLL"
     gene            25040..25669
                     /locus_tag="PXD18_000517"
     CDS             25040..25669
                     /locus_tag="PXD18_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HDL6300980.1"
                     /translation="MAVSATSFAQTTQPTAAEQMNAVKASVAEKATVAKEATKEKAAE
                     LKAGSAEKMAIAKAKTESFKDSAKNKMDAVKATTAEKTDVIKAKAASASDTMKVKAQE
                     AKAATAEKAATAHETLNSAKTATAEKAASMKAAATEKMSAVKKSQKVNINTANEEQLQ
                     SLTGIGEAKAKAIVEYRKKHGKIKNAAELANIPGIGDATIEKVAPYLTF"
     gene            25817..26446
                     /locus_tag="PXD18_000518"
     CDS             25817..26446
                     /locus_tag="PXD18_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL6300981.1"
                     /translation="MALDFNSVGLDSVEAKGGYGIGLQIGQQLLGSGMDVNAETVARG
                     IYDVLNNNEPAIDINEVTAALQELGQRAEAAQAEAFKAIDAENKAFLEENKKANGVIV
                     TDSGLQYEILTEGTGEKPTATSTVRVHYTGSLIDGTVFDSSVKRGQPAEFPVNGVIRG
                     WTEALQLMPVGSKWRLTIPQELAYGERGAEASIPPFATLVFEVELLDIL"
     gene            26512..27027
                     /locus_tag="PXD18_000519"
     CDS             26512..27027
                     /locus_tag="PXD18_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HDL6300982.1"
                     /translation="MQKKSLISRLLKNIFLYGSLFIIISLVVDWYRSPSAPAQFEQTV
                     HYDIQHQPKVIAQLSHEKPMLLYFWGSWCHYCQVVSPNIQQLANDGTEVLGVALKSGD
                     ENDVQAYLNENGYTFATLNDPSGDFSRGWNIQATPTILIIKDGKIAHHTTGYTSYLSL
                     KFRLWLADVLY"
     gene            complement(27075..28005)
                     /locus_tag="PXD18_000520"
                     /pseudo
     CDS             complement(27075..28005)
                     /locus_tag="PXD18_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433453.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(28064..28714)
                     /locus_tag="PXD18_000521"
     CDS             complement(28064..28714)
                     /locus_tag="PXD18_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISMha4 family transposase"
                     /protein_id="HDL6300983.1"
                     /translation="MRKSRLSQYKQNKLIEQFVAGVTARTASELVNVNKNTAAYYFHR
                     LRLLIYQHSPHLEMFEGEIEVDESYFGGHRKGKRGRGAAGKTAVFGLLKRDGKVYTVV
                     VPNTQFATLLPIIREKVKPDSIVYTDFYRSYDVLDVSEFNHFRINHSTHFAENQNHIN
                     GIENFGSQAKRHLRKFNGIPKVHFELYLKECEWRFNHSDLKSQISFLKQLVKGSLG"
     gene            29043..30401
                     /gene="mnmE"
                     /locus_tag="PXD18_000522"
     CDS             29043..30401
                     /gene="mnmE"
                     /locus_tag="PXD18_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDL6300984.1"
                     /translation="MKDTIVAQATPIGRGGVGILRVSGPLAETVAQAVLGKTLPPRIA
                     NYLPFKDEDGTVLDQGIALFFKAPNSFTGEDVLELQGHGGQVILDLLLKRILQVKGLR
                     IARAGEFSEQAFLNDKLDLAQAEAIADLIDATSEQAARSALKSLQGEFSNKINALVDS
                     VIYLRTYVEAAIDFPDEEIDFLADGKIEAKLNEIIAQLDGVRREAKQGSILREGMKVV
                     IAGRPNAGKSSLLNALAGREAAIVTNIAGTTRDVLREHIHIDGMPLHIIDTAGLRDAS
                     DEVERIGIQRAWEEIAQADHVLLMIDSTEQQADQFRQEWAEFLAKLPANMPVTVIRNK
                     VDLSGEQEGLIQVDDFTMIRLSAQTKVGVDLLREHLKKSMGYQSSTEGGFLARRRHLQ
                     ALETAAEHLERGHIQLTQFLAGELLAEELRMVQNALSEITGQFTSDDLLGNIFSSFCI
                     GK"
     gene            30402..31667
                     /gene="tilS"
                     /locus_tag="PXD18_000523"
     CDS             30402..31667
                     /gene="tilS"
                     /locus_tag="PXD18_000523"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HDL6300985.1"
                     /translation="MALFNRFQTQCATHLPNQTAFLIGLSGGVDSVVLLHLFARTSFH
                     VRAIYVHHGLSPNADDWAAFCEQYCKRLNIPFILQKVRVDSSNGVENGAREARYQAIQ
                     QQLKPNEVFATAHHLDDQAETFLLALKRGSGVKGLSAMQAVTFLQNFTVFRPLLTFTK
                     SDLMGYAVQHQLGWIEDESNADNRYDRNFLRNSILPLLNQRWQHFSQMVARSAQHCAE
                     QQALIEELLSNELKSRTGEKQQLNINGFGQFSLAKQQQLSRLWLEQNGVRMPSQAQLQ
                     AVISELIFAKADKNPQVKVGENIIRRYQQAIYVTEEIADIPPFEVVLPTETKVELPYQ
                     LGTIIRQQQEIICKKNGKNHRLQLPQELAQSTISIKIGQLGKVKCYGKAQREEMKKIW
                     QNHGIPVWERNRTPLIFWQDELVGLLPIL"
     gene            complement(31657..32550)
                     /gene="xerD"
                     /locus_tag="PXD18_000524"
     CDS             complement(31657..32550)
                     /gene="xerD"
                     /locus_tag="PXD18_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HDL6300986.1"
                     /translation="MAELDPIIEQFLDTLWQEHGLSENTVASYRSDLERFSDYFSEPK
                     AFLSLDHIDLQGFLGERLEQGYKATSSARMLSCLRKFFRFLCLEHYRQDDPTLTLSSP
                     KRGASLPKSLSEDQVMDLLDAPNTLDPIELRDKAMLELLYATGLRVTELVSLSMDNIS
                     LKQGVVRIIGKGDKERLVPLGEEANYWIQEFFQYGRPILLNNQQSDVVFPSRRGQQMT
                     RQTFWHRIKHYAVLAGIDADKLSPHVLRHAFATHLVNHGADLRVVQMLLGHSDLSTTQ
                     IYTQVAKARLKSLHQQFHPRG"
BASE COUNT         9654 a         7271 c         6536 g         9199 t
ORIGIN      
        1 tcagtggtgg ctgataaaat caatctacat tttgaacaag gcaagatcta tactttactt
       61 ggcccaaatg gtgcgggtaa atcttctctc cttaaaactc tatttgggga aattgctcat
      121 caaggcacaa ttgattttga cggtaataaa ttaacctcaa gccacttgca tagttggcgt
      181 aaagaaattg gctatatgcc acaagacaca caggtagagg cctcactcag tgccttagag
      241 gttattttat tagggcaact tgatagcctg aatatgtata ttagcgatga attactcaat
      301 gaagccgttg atattatgga taaactcggt atttcacatc tagctcatca agatattatg
      361 cggctaagtg gcgggcaacg gcaaatggta atgttcgcac aagtattgct acgtaaacca
      421 cacattctgc tgctagatga gcctgtcagt gcgttggata tgtatcatca aatcaactta
      481 cttgaatatg tgaatgccta cactcgagcg aataacctaa ttacaattat ggtgctgcac
      541 gatttaagcc ttgcggctca attttcggat agtgtgatgc tattaagcga ggggaaattc
      601 aagcacaagg cagagcttgt gatatgttgg aatgcgatat tattcagaga ctctataatg
      661 tcaatattga gattttatat gatggaaacg gctcgccgat tatccgcccg cttcgcaaat
      721 gtttaaatat tgattgctgt ttgaaccgca aatagtaaaa gcgaatacaa gcggtcattt
      781 tgcaaaataa atctgcaaaa tgaccgcttg ttatttttat ttcagttgca taaagaatgt
      841 gccttttggc gtaattggta agtagttgtt gtggaaatcc aaatacgttt tttcaggatc
      901 gatatcttta aacaattcag gataaagtgc ttttgccata aattgagcac tcgctaaatc
      961 tgaaattgag cgagaagctg tatgatataa accataaaca cgccctgatt ttaccgcagg
     1021 taactctttc caacctgtac gctcaataaa gccttttaag cgtttttgag catcggcttc
     1081 ttcaatatta atccccatcg acataatctc agggttagtg tcgttgccta gttccgtacc
     1141 tgaaatcata atcacatcag gtttagaaac taacacctgc tcagggttaa tctgccccca
     1201 gttttctaca aacggggcac taatgttatc gcctcgcacc gtttcggcaa tcgctcccca
     1261 catattttta ccaaaggtaa aactatgctc tttcgggcct ttattaccaa attcagcata
     1321 gattttcggc ttacttactt ttgcattatc aatacagctc tgaatatcag caatgccctc
     1381 ttcatactct ttggcaattt tctccgctct ctcttcagtg cctgtaagct gaccgaaaac
     1441 tctcacgctt tttgtatggt tttcaatagt ttgcttgttg aaatctacta caacaggaat
     1501 gccagcttgc tcaatgcgtg aaatttcact ggctaacgct tgatattgaa tttcaggtag
     1561 cactaacaca tctggtttta atgcgatggt tttttctgtt gaaaaagtac cactattcac
     1621 atagccaaga tcggcaatgt tttttagatt tggcattttt tctgcaaata atgcccaact
     1681 gcctgggttg aacttttccc aaaactctcg tgaaatccct actaccttat cgaaattttc
     1741 aacaccggtt accgcaatat agtcagggta atagaaagtc agtgcaacac gtttagcagg
     1801 cacatcaact ttgacctcac gccctaatac atcagtgatg gttttaattt cggcattggc
     1861 agttgcacca aaagcaagca atgtggcagc aaatacgctg tttaatagta attttttcat
     1921 tggaactcca aaaagaaatg gaaagttgaa ttgtaacttt ctataacaaa tagtcaatga
     1981 aaataattcg caacaacgaa attatctata gaagagtaaa ttagaagaga ttacaagcgg
     2041 tttaattttg ctaaaacttt gcaaaccaca aaaacaaagg gcaaataata ttcgccctta
     2101 tcgattttat ttcaccaatt cgcctttcgc ttgtaaatcc gcgtggtaag aagaacgcac
     2161 gaacggtccg caggctgcgt gttcaaagcc cattttttca gcttcctcac ggaacatatc
     2221 aaactctgcc ggtggcacat aacgttccac ttttaagtgg tggcggcttg gttgtaagta
     2281 ttgcccgatg gtgagcatcg tcacgccgtg gtctcgtaaa tcttgcatta cttccaagat
     2341 ttcttcgttg gtttcaccta agcctaccat taagccggat ttggtcggaa tatgcgggaa
     2401 ctcttgcttg aagattttca ataattccaa cgaccatttg taatccgctc ccggacgaac
     2461 ttcacgatag agacgtggca cattttctag gttgtggtta aagacatcag gtggattttc
     2521 tttgagaatt gccaccgctt gctccacacg tccacggaaa tcaggcacta aaatttcaac
     2581 cttacaatgc ggatttaagg ctttgatttc acgcacggtc gcagagaaat gagccgcacc
     2641 acggtcgggc aaatcatcac gatccactga ggtaatcacc acatatttga gtttcatatc
     2701 ttgcaccgtt tctgccactt tgcgaggttc gtccgggtca agcggaagcg gtttgccgtg
     2761 tgccacatca cagaacgggc aacgacgggt acagattgcc cccataatca taaaggttgc
     2821 agtaccgtgg ttaaaacatt cgtgtaaatt cgggcaagag gcttcctcgc acaccgagtg
     2881 caagccgtgg cgacgcatac cgtttttaat gctatcaatt tttgccgaat ttgccggcag
     2941 tttgattttc atccactccg gtttttttaa gagttcttga tccgggtcga tattacgcac
     3001 ctgaatcaca gaggttttgg cggcatcacg atatttcacc cctttttcca ttttgaaagg
     3061 gctcattttt ttcactgtag cagttgccgt cgtttgagct gtcgatgtag ccattactgt
     3121 gttttatcct aattgttaat aatttgttgg ttattatagc ctaaaattgt gctgaaatga
     3181 gccactaatt ttggagcaac ctcttcgcaa cgcaaatcag ggcgatgaac cagttcactt
     3241 aattggcaca tttccagccc tgcataaccg cacggattga tgttttgaaa aggcgttaag
     3301 tccatattga tatttaatgc caaaccgtgg aaagagcaac cttttcgaat tcgtaaacca
     3361 agtgagcaga ttttcttgcc gtccacatac accccgggtg catcggcttt tggataactt
     3421 tctatgccat attctgccaa cgtttgtacc acggtttgct ccagggcagt cactaaatct
     3481 cgaaccgaca cttctttacc caaggatttc agccgtttga tatcaatcag cacatacata
     3541 atttgctgcc cctcgccgtg gtaagtaatt tgaccgccac ggtcgctttg caccaccgga
     3601 atattggttg gatttaacaa atgctccggt ttgcctgccg atccttgcgt aaacacagcc
     3661 gggtgctgaa ccagccagat ctcatcatcg gtattcccat cacggctatc tgtgaaagat
     3721 tgcatttggt gccaaatttc ttcataaggc tgaatgccta gttggcgaat tattaatttc
     3781 attttctatt ttccaacatc gctttattga aaaattgagg gcgaatgtca ttcgcccctc
     3841 gcattataat accattctta cgccattaat tttggcaagt tccgtgtaga gagtttctac
     3901 ttgctcaata ttttccgcca caatatcaat cgaaacggaa ttataggtac cttttgagct
     3961 tttttgctga cgtggattgt aatcgccttt ggcatatttt tgcgtgacca ctaccacatc
     4021 atcaaccaaa tcttctcggt ttgctcccac cactttgaac gtgaaatggc acggaaactc
     4081 tagcagatct tttaatttgg cttgaggtaa atcttgtaag tttatcgctt tgggttgaga
     4141 catttttgat ccttcttcta ttctttcttc gaggggcgaa aaatttttcg ccactacact
     4201 ttttatacat tcatatctaa aacggtaagc ggtgaaattt tgcaaatttt ttgcaaaatc
     4261 acaccgcttg cattgctccc tagatgggga taaaaaggca aataacaaga ttaatcgaac
     4321 aagctcttca cagtaagggc aatccaatcc cacgctttgc cgaaaatacc ggcttccggt
     4381 acatcttgta agacttgtaa gttagtgctt gcaacatctt tgccgtcaag ttggtagatc
     4441 attttaccca ctacctgccc ttttgctaaa ggagcttcga ggtttttctt ctctaactca
     4501 taacgggctt ttaaatctgc cgagcgacct ttcgggatag tcacaaagct atcttgcacc
     4561 gagcctaatt gtactttatt gacttcaccg taatagacac tttgctctgc caccgattga
     4621 gctgccggaa tagatttaat ggtttcaaag ttcgcaaagc cccattgcag taatttctta
     4681 ctttccactt cacgcccttt ataagttggc acgcccatca ctacagaaat taaacgtgta
     4741 ttcgggttaa ttgctgatgc gactaagtta tagccggctt tatcagtatg ccctgttttc
     4801 ataccatcaa cttgaatggt tttatcccac aataatccgt tgcggtttgg ttgtggtttt
     4861 ttgatgttat attggaactc tttttccgca taaattttat actcttccgg ctgatcacga
     4921 ataatatgcg aaccaataat cgccatatca cgagcagaag aatattgctc agggtcatct
     4981 aaaccgtgaa cagtggtaaa gtgagtattc tttaagccaa actgttgggc atatttgttc
     5041 atttcattaa tgaacgccgc ttgtgagcct gaaacatgtt cagcaagcgc cacagaggca
     5101 tcattacccg agacgataat cagccctttc atcaactcac ctactgaaac tttgctgttt
     5161 aaatctaaaa acattaatga agagccgggg aatttttgcg cccacgaatt ttcggtgact
     5221 atcaccatat cactgttttg cacttttccc gattttaggg cttcaccaac tacgtagcta
     5281 gtcatcattt tggtcaatga tgcaggatat tgacgttgat ccggatttag gctcactaaa
     5341 acttcaccgg agttgtaatc catcaaaata taggtttgtg cgttgatctg gggtgccgat
     5401 aaattgaagt tagtgtttaa atccgcatag gcaatgcttg aaaccgcaaa acctaccacg
     5461 ctcatcgctt tcactaatgt ttttttcata ttccctctta aattaattca ttacataaaa
     5521 ctgattagtc gatcccaatt ttgacttatc aacaatcgca attttcactc ttgccgtccc
     5581 cgaatggtgc ataccgattt ttttcgctgc ggctgatgat aaatccaaga cccgtgcgtg
     5641 agcataaggt ccgcgatcat ttacacgcac caccacagaa cgaccatttc gtaaattcgt
     5701 cacttcaatt aaagtaccaa atggtaaagt tcgatgtgca gccgtcattt ttgcgttatt
     5761 gaaagtctcc ccattagcgg ttcggcgacc attaaagtaa tttgcataat agctggcaac
     5821 accagtctgg aaatgttttt tgaccagtgg cttatgctgc ttttttacca attttttctt
     5881 agcggttacc gttttcttga caaccttgcg agccagcttt tttgtagatt taatcggctt
     5941 agttgtaaca gtagaaattg ttttcttttt tgtagcttta gccactactt cttttttctt
     6001 aactttagaa atacctactt tttttattgc tttagaagtt gcttgcttct tggctaaaat
     6061 actcgattta gcttttgtat tctttgtcgc agccaaagaa tttaatgaac taaatgtcag
     6121 aaatccagct aacaacaggg ttacaatttt acctaatctc atataagttt tttcctctat
     6181 gtggatgtcg ttattgtttg taacgatgat cgtttcactg ctttttgata ccgcaaaaaa
     6241 gcaaaagttt aatttatttc agtttatcat aaggattatt actacctaca cgcttacggt
     6301 gaacataggt tgacatcatc aaaccaaatg ccgccatcag cgtcacatag gaggttccgc
     6361 cgtaactgaa aagcggtaat ggtacaccga ctacgggtaa aataccactc accataccaa
     6421 tatttacaaa aacgtaaaca aaaaatagaa gggctgtacc acctgataat atacgcccga
     6481 aagcagaatc cgattttgtg ccaatcacta aacctcgggc aataataaac aaataaatcg
     6541 ctaataaaat cagcacacct atcataccat gctcttcgct taacactgca aaaataaaat
     6601 cggtatgcgg ttcaggtaaa aattcaagct gggattgcgt tccttccatc cagccttttc
     6661 cattaatgcc accagagcct atcgcaattt tggattgaat aatatgatag ccggcaccca
     6721 acgggtcttt attaggatca attaaggtca tcacccgggt tttttgataa tcgtgcatta
     6781 agaaaaacca cattatcggg ataaaaccgg ctaaaaacac cacacctgcg ccaattaatt
     6841 tccaacttag ccctgccaaa aataaaacaa aaataccggc agaacacact aaaatagatg
     6901 ttcccaaatc gggctgaatt gccaccaata aggttggcac aataataatg gctaaggcga
     6961 taaaagtatc tttaaaactc ggaggaagcg gccgcttacc taaataagtg gctaccatca
     7021 gtggcacagc gagcttggca atctcagaag gctgaaagcg aacaaatcct aaattcaacc
     7081 aacgttgcgc tcctttactg gtttcgccga ccaaatccac caaaatcaat aatatcagac
     7141 agaaaatata cagataaggc gaaacttttt gataaaagcg aggaggtacc attgccatta
     7201 tcaacattag cccaagccct agcgaaactt gaatcagtct actggtaaac atccgctcat
     7261 ttgcaccgct tgcgctatat agtactaata aaccataacc ggtaatagct aataatcctg
     7321 ataataaaag gagatcgagt gaaaaaattt tccagaaaag ttttttaaag ccactattca
     7381 tgatgttcct ctgtgacaag cggtttattt tgctcagaat tttgcgaatc cggctgttca
     7441 ccaatgcctt ttctcaaagc ataatccata atctgacgag caacaggagc cgcggcacta
     7501 ccaccaccgc ctgcattttc taaaattaat gccaccacta ttttaggttg ttcataagga
     7561 gcatagccga taaaccaagc gtggtcgtgc aactcttttt taatcgcatt tttatcgtaa
     7621 tttttaccgt ttaagttaaa cacctgagcc gtaccggttt tccctgctga atgataaaat
     7681 gcaccggcaa acacttttcg tgccgtaccg tttgcggcgt ggtttacgtt atacattccc
     7741 tgttttgcta aattccaata gacatccggc acgcctttaa tatcttcata caacaatggg
     7801 tcttgatacg gcgtaaccga attactgctt tgcacttcaa gcattaaatg cggtgtattc
     7861 acccgcccgt tgttgattaa caccgccgtg gctttcgcca actgtaacgg ggtcgaaatc
     7921 cagtagccct gcccaatccc aaccggaata gtatcgccct gcacccaagg ttttttatag
     7981 cgtttttgtt tccattcacg ggttggcatt acccctgcgg attcctcaaa aatatcgata
     8041 ccggttttca ctccgaaacc gaattttttc atccaatccg acattttatc aatccccatt
     8101 ttataggcta attgatagaa aaaggtatca gacgattcgg taattgcttt attcacatta
     8161 gttgcaccgt gtccgctacg tttccaatct cgataacgtt gtgtagtgcc gggcaaaatc
     8221 caatagccgg ggtctgaaat ggtggtagaa ggggtaatca ttccctcttc caaacctgcc
     8281 accgccataa atggcttaat agttgaagcc ggtggataag tgccttgtgt agtacggcta
     8341 taaagtggtc gggttggatc gtccaataat gctttataat cctgccctga aataccgccc
     8401 acaaataaat tattgtcata acttgggttt gagaccatcg ctaaaatact gctatcacga
     8461 gggtcaagca ccaccaccgc ccctttatgc ttagcaatta acgacatcac atattgctgt
     8521 aattccacat caatactcaa gcgaatactg ctaccggcaa cccctgcttg gtcacgcaat
     8581 ttacggatta ctttccctcg gttattaatt tctacctctt caaaaccggt gacaccgtgg
     8641 agctgatctt catagaattt ttcaatcccc aatttcccca tatcgtgcga accggcataa
     8701 ttgccgaatt tcccggcttc ttgcagcttt ttcttatcgt tttcgttaat tttcgccaca
     8761 taaccgataa tatgggttaa aagctcgccg taaggataat tccgcttata atacgcctgc
     8821 acatctaaac ttggaaaacg gtattggttc accgcaaaac gagccatctg agcctcattc
     8881 aaattgcctt tgagcataat tggggtatag cgagaactgc gttttttctc tttatgataa
     8941 ttctcgatat cttcgtccgt cagcccaaca atatccttca actcggttaa agtctgctca
     9001 atgttttccg tcttttcagg cacaataaac agcccgaaat aggttaaatt ttccgccaat
     9061 actttaccgt tacggtcata aattaagcct cgagccggtg gcacaggcaa caatttaatg
     9121 cggttaccgt ttgaacgggt ttggtagtcc tcataattca ccacttgcaa gtgatacaag
     9181 ttggttaata aaacaccact taacgccaac acccccagaa acgcaactaa ggcacggcgg
     9241 gcatacagat tgctttctgc ctgcccgtct cgcacctttt ctcgctggtt tgaagctgtg
     9301 aattttgcta atttaccaaa catataacac tatctaaaat gactcactac tctcgatgat
     9361 aagggtgatt aatggtaacc gaccacgccc gatacaaact ttccgccacc accacccgca
     9421 ccagtgggtg aggtaaggtt aaaggcgaca acgaccaact ctgctcggca gcggctttgc
     9481 attccggtga taatccttcc gggccgccaa tcaataacgc tacatctcgc ccatcgtttt
     9541 tccagccctc taactgagtg gctaactgct cggttgtcca cgctttgccc ggaatatcca
     9601 aagtcacgat ttttgccttg cccgctgccg ccaacattgc tttgccttca agctcaagaa
     9661 tgcgtttagt atcagcattc ttgccccgtt ttcctgccgg aatttccacc aactcaaacg
     9721 gcatctcttt cggaaaacgg cgttgatact cttcaaaccc tgtcgttacc cacgccggca
     9781 ttttagtgcc aaccgcaatt aattgaattt tcatctctct ttcacttaca agcggtttaa
     9841 tttgcaaaaa atgttgcaaa aatcaccgct tgtcgttcct tattgaactg ctacgcccaa
     9901 agtttctcta attggtacat ctcacggcta tcggattgca acaagtgaac cattgccttc
     9961 ccaaaatcga ccacgatcca atcggcaact gctttacctt catctccaaa tacctcgaac
    10021 ccagcctgtt ttgcttccgt aattaaacgc tctgccgttg aagcaacgtg acggctcgat
    10081 gtaccggtgg ctaaaatcat cgtatcagta atgctagatt tccctttcac atcaatggct
    10141 aaaatatctt gtgcctttaa atcatctaag gttttggtta aaaattcgac taaattctgt
    10201 tccacgtttc tctctctcat cttataaaaa tgtagaattt taacatagat tgaacggata
    10261 aaagaaagaa agcggtcatt tttgcaagat tttttgcaaa aatgaccgct tgttacttac
    10321 tctaaaatgc ctaactgctt ccaatactat ggcatatttg cttttgtttt acctattttt
    10381 tgagtcgtag aatagggagt cgataaataa tcaatgctat caaaatcaag ctgcaaccta
    10441 gccattttgt cgcactaagt tgttccccca ataacatcac gctcaataac aatgtccaaa
    10501 ccggctcaag taacataatg agtgcagaag taccaatatg gcaatatttt tgccccagtg
    10561 tttgcattaa aaaacgtaaa tttgtcgcaa tcaatacact tgcggcaaac cagagccaca
    10621 cttcggtgag aatcgggaaa tgccaacttt ccataaaata ggaatacaag ctacagaccg
    10681 caccgactat cgccaattgg atagtaatta atggaaacaa tgagacttgt ttggcgtatt
    10741 gattatttaa cacaaaatat aacgccccaa acactgatga caccagaaaa atcgtactgc
    10801 ctaaggaaaa atgaaagatg cctttctccg cagaaagaaa gtaaagccca cttaatgcaa
    10861 tgggtaaggc taaccaaaaa atcttcggtg gcgtatgttt gaatatcaac caagagagca
    10921 aaggagcaat cagcatcgca aggctcacca aaaaagcccc ttcaccaaac actgtactaa
    10981 aagccagccc caatacccaa aaaatagtat aaattccgta agtaagaccg gtaatcaccg
    11041 aatatttaac ttgaacctta tctaaacgat acagctctcg gtaagaaaaa ggcagaagaa
    11101 tcaaagaggc taatataaaa cgccctccca taaagccaat aggcggtaat ccaactaaag
    11161 cgtgtttaga gaaaaaccac cccgctgcag caataaaggt aacgagaaaa aggattattt
    11221 cgccgaaata ttttttgaac atatcaaact ataaaatgcc ctctacagta gagggcatta
    11281 taataaataa ggctaatcgt taaaatagac tttcttaagt gccaactcca atccacggaa
    11341 ctccgctaat cctcttaaac gaccaatcgc agaatagcct gggttggttt ttttcttcag
    11401 atcatcgagc atttgatggc cgtgatccgg acgcattgga attaatcggt gatcgccatt
    11461 tgccttgcgg cgatactctt cggtaagtaa tgctttcacc acgccaaaca tatcgacatc
    11521 accggcaaga tgatccgctt cgtggaaact ttgtggattt tcttcacgtt gggtagctcg
    11581 taagtgagca aaataaatgc gatctgcaaa ctgctctgcc attttgacca aatcattctc
    11641 ggctaatacg ccgtatgaac cggtacagaa cgtgaagcca ttggctgcaa gcggttgagt
    11701 ttccacaaac cattgcatat cttctatggt tgaaacaatg cgtggcaagc ctaaaatcgg
    11761 gcgaggcgga tcgtcagggt gaatcgccat acgaatgccc acctcttgtg caaccggcac
    11821 aatctcattt aagaaatagg ctaaatgggt acggaatttt tcagccgaga gcccttgata
    11881 gcggtcaagc tgtgcttgga attcttcgag cgtatagcct tcctcagacc ccggcaaacc
    11941 ggcaatgata tttttggtta attttgcaat atcagcgtca ctcatctgct caaaataggc
    12001 tttggcttcg gcttgttctg ctgatgagta agtggcttcc gctcccgggc gttttaagat
    12061 atataactca aacgccgcaa acgccacttg gtcaaaacgc aatgcttttg agccatcagg
    12121 catttcatac tccagatcgg tacgagtcca atctagcacc ggcataaagt tatagcacac
    12181 cgtatcaatc ccacagcttg ccaaattacg caaggtttgc ttatagttat caatccattg
    12241 ctgatagttg cctgtttgag ttttgatttc ttcgtgaaca ggcacacttt ctaccaccga
    12301 ccaaaccagc cctttttcag ctaataatgc cttacgttta ttaatttcct caaccgacca
    12361 cacctgcccg ttgggaatat ggtgcaacgc tgtcacaatc cccgttgccc ctgcttgtct
    12421 tacatcatct aaagataccg gatcgtttgg tccataccaa cgccatgctt gttccatagt
    12481 aaactcctca ttgtgtagtt taggttttag atacctacta caacggggtt tacattgaat
    12541 agatatccat caaatttagg atcctctaca tcagacaatt caagcaattt agttttaaca
    12601 ttttctagat gttgccacat tgctttacga gctaatgcag gattttttct ctgtattgca
    12661 tttaaaattc gctcatgatc ctctatccac aagtggtgat gatcatgctg taaaattctg
    12721 gagtgtagct gagcccacat cgcactatta aagcggtatc gccaaagctg ttcttgtaat
    12781 tgaatcagaa catcgttacc cgtcatatga gctaatgcaa gatgaaattc cttatctgca
    12841 ctgtagtcat ccatcttctc taacaaaagt ttcttctcac tttctaatat gttacgaagt
    12901 acttgtatat cttgtttggt agcctgctgt gctgcaaact cagcaatact gctttctaat
    12961 aattgtcgtg cttgaagtag ttcaaatggc ccaacatccc ttagctcatt atctttctct
    13021 tctggaaaat cttctggaaa aagctccggg actctaatga catacacgcc cgatcctttt
    13081 tttacctcaa taagcttttc tacttctagc atcactatcg cctcccttac gatagttcta
    13141 ctcacttcaa atctttcaga aatatctctc tcagtaggta acttatctcc tactctgtat
    13201 tttccttgag caatttcctc tttgagaatt tttcctattt tagtgtaagt tctggaacta
    13261 ttttgcataa atcctcacga aattggaatt ccaaaatttc atttttgtga tcaggttcac
    13321 aaaatcacaa aaattggaat gccaaacttg ttttttggtg ttagtatctg tgcataaaat
    13381 accattgaca ctacaaaatg tcgattaact ttatcaaaaa aggacaaaat catggaaaaa
    13441 ccactcaaat cagtatgtct tgtagaacct aataaagttg gtatacaaac cgtttcttat
    13501 cctgttaaag gtgaaaatga tgtgctaatc aaagtagaag gtatggggat atgtggctct
    13561 gatattggag catttagagg cactaatcca cttgttactt atcctagaat tttagggcat
    13621 gaaatcgttg gcacagtaat tgagtctggt aaaggtatgc caaataatat taatgtagga
    13681 gatcgtgtca tcattgaacc ttacatctat tgtggacatt gctatccctg ctccattggt
    13741 agaacaaatt gttgcgaatc tctaaaagta ttgggggtac atattgatgg ggcaatgcaa
    13801 gaggttgtta gacatccagc ccatatgata atcaaaacac ctgatatgcc aatacacgaa
    13861 ttagcgttag cagaaccctt aactatttcc ttacacgcaa ttcatagaac aaaagtcaaa
    13921 gctggtgaac atgttgctat cattggagca ggggcaattg ggctaatggc tgcattggtt
    13981 gccaaagctt atggagcgac gccgatttta attgacattt tagataagcg attggattac
    14041 gcaaaatcta ttggtattcc acacacaatt aatccaacaa aagaaaacga tcttgaagct
    14101 attaaatcaa ttaccaatgg aagaatggca gaggtggtta ttgaagcgtc aggagcaaat
    14161 gtcgcagtac aaaatacgct taaatacacc tcttttgctg gacgtattgc tttaaccgga
    14221 tggccgaaaa cagaaacacc attaccaact aatttaatca ccttcaaaga acttaatatt
    14281 tatggggcaa gaacaagcaa gggggcattt gaagaagcat tagagcttct ggcatcaaga
    14341 agaattgaac caaaagatat cattagtaag gtaattacat ttgatgaaat acctcactat
    14401 atcgaagaac tctcagctaa tcctgatgat tacttaaaaa tcatcgctgt attttaaata
    14461 ctaactcacc tacgaggtaa taactatgaa actcaaaact ttcactaaag ctctattaat
    14521 ttctagcctg atgttcaccg gttcggcatt tgcgaagact atcattaaga ttggtcacta
    14581 taattcagat gttcatccat caaatatcgc attgcaggaa tacttcaaaa aaaccattga
    14641 agaaaaaaca gaaggacgct acgaaatccg tattttccca aataaccagt tgggaggaga
    14701 agatcaaatt gtaaatggtt tgcgtaatgg cacgattgaa ggtggcatta caggtttatt
    14761 actacaaaat gttgatccaa tttttggcgt atgggagtgg ccatatctat ttaaagataa
    14821 tgccgaagct aagaaagttc tagaatctcc tattgctcaa gaaatcgggg aaaaaatgga
    14881 gaagtacggc attaaattac tagcgtatgg tatgaatggc ttccgtgtta tctcttccaa
    14941 taaaaaagtt gagaattttg atggatttaa aggtttgcga ttaagggttc cactaaattc
    15001 gttgtttgtg gactgggcaa aagcaatgca tattaaccct caaagtatgc ctttaagtga
    15061 agtatttacc gcactagaac aaaaagtcat tgatgggcaa gaaaatccat atatgttaat
    15121 taaagattct ggtttatacg aggtgcaaaa atatattatt gaatctaatc atattttctc
    15181 acctggctta ctacaactta gtttgaaaac ttggaataaa atgtctaaag aagatcagac
    15241 aatcttctta gaggcagcaa aactctacca agaaaaagag tgggaattag cgatgaagat
    15301 ggaacaagat gtaaaagatt tcttccacaa aaatggcaaa gaagtcattg ttccgagtga
    15361 acaatttaaa gctgatatgt taaaagcatc cgaaacgctt tatcaaaatt tctatcagaa
    15421 atatgattgg gctaaagatg ttatttcaaa aatccacgca gccaaataag caataagcga
    15481 ggcgaccgga taaaagaggt cgcccatcta aatgaagaag gagaaattta tgcaaatttc
    15541 tacagcatta gatagaactc tcaaactcct tgcgataatt gctctatcta caatgattat
    15601 cctagtcttt tttaatgcgg ttttacgata tttttttgac tccggaatag cttggtctga
    15661 ggaattcgcc agaatctgct ttgtctatat gatctttcta ggaataatcc tcgttgcaaa
    15721 ggaaagggga cacctcaccg ttgatattgt tgtttctgca ctaccggcaa aagtacaaat
    15781 gtacttactg ttctttgctg atattttagt cttagttgca ctgtcattta ttacttacgg
    15841 tgcataccag ttaatgttat tgacatacac acaaaaaatg ccagcaactg aaatttcatc
    15901 tgcgtttcta tattttgcag cagttatttc atctatctcc tatttcgcta ttgtattcac
    15961 aaatttatgg aaacatattc ggctagcttt cattaaagag gagaaataaa tatgttatgg
    16021 ctatttttag gaagtctatt cctctttctc tttttaggag tgcccgttgc tctctctatg
    16081 ctacttagtg ccagttttat gctatggaaa atggatatgt ttgatgccca attaatcacg
    16141 gagaatttcg taatgggtac aaataatttt ccgctgatgg ctatcccgtt ttttatgctg
    16201 accggtgaaa ttatgaaaca cggcggtatt tccgaacgta ttatcaattt tgcaatgagc
    16261 atggtcggcc atattaaagg cggattgggc tatgtagtga ttatttcagg cttaattttc
    16321 gcaggtttat ccggctccgc tgttgctgat accgcggctc tcggtgcaat tcttattccg
    16381 atgatggttg caagaaaata tgatgttgca cgttcaacag gcttaatctg tgcagcaggt
    16441 attatttctg tagttatccc accaagcatt ccaatgattg tctatggtat tacagccggt
    16501 gcatcaatta ccaaattatt tatgggagga atggttccag gctttttaat ggttttaggt
    16561 ttatggttag tttggaaatt cttataccga aacgaagaac aaaccgttga accgaaaaaa
    16621 acaggtaaag aacgttgggc tgcatttaaa tcagcattct taccattgct acttccaatt
    16681 attattatcg taggtttaag aggcggcatc tttacaccaa cagaagcggg agttgtagca
    16741 gcaatttatg cagcaataat cagcattatc ttaaaagggt taaccttaga taaaatccaa
    16801 gatgttttct taggcactat caaaacaact gcaatggtta tgtttgttgc agcggcggca
    16861 atgatatctg catttgcagt tactgttgct caaataccta tggagttagt tgagtttatc
    16921 aaaggtatta ccgatagccc gactgtacta atgttcgtca ttatgatttt cttattatta
    16981 gtcggctgtg taatggactt aatcccagca gtattaattt ttgtaccagt actattacca
    17041 ttactaagag cgtataacat cgatattgct tactttggta ttatgatggt aattaaccta
    17101 tctatcggtt taattacgcc tcctgttgga acggtattat atgttggttc tggtatagca
    17161 aaaattggta ttgctagatt aaccaaaggt atctatccat tcttgctagt ctatgctgca
    17221 atactgttct tattaatact tttccctgaa attattatcg taccaatgaa ttggttatct
    17281 taggagttct tattatgtct attgcccaaa atcataattt taaagataaa gttgttgtta
    17341 ttaccggagc aggtggtgtg ctatgtgctt attttgcaaa agaaattgca aaaacaggtg
    17401 caaaagttgc actactcgat atcaatctag aagcagcaca gaattttgct tctgaaattg
    17461 ccgatgaagg ctatattgcg aaagcgtacc aaactaatgt acttgaatta gaaagcataa
    17521 aacaggcaag agatgaaatt ctaaaagatt ttggcacttg tgatatttta attaatggtg
    17581 caggtgggaa taatccaaaa gcaacgacag ataatgaatt tcacgatatt aacttaccgg
    17641 aaaatacaaa atcttttttt gaattagata aagcagggat tgaatttgta tttaatttaa
    17701 attacttagg cacactatta ccaacacagg ttttcgcaaa agatatgttg ggtaaagagg
    17761 gcgctaatat cattaatata tccagtatga atgcctttac tccattaact aaaatccctg
    17821 cctattctgg agcaaaatct gcaatcagta actttacaca atggttagca gtttatttct
    17881 caaaagtagg tatccgctgt aatgctattg caccgggatt tttagtgagt aatcaaaata
    17941 aagctctact atttaacgcc gatggtacgc caacagctag agctaataaa atcctcacga
    18001 atacccctat gggacgtttc ggacaagccg atgaattggt aggtgcaatc ctatttttaa
    18061 tggatcacca ttattccagc tttatcaatg gcgttgtatt acctgttgat ggcggattct
    18121 ctgcttatag cggcgtgtaa cttagaaggt attcctatga aaaaactcgc cattctcggt
    18181 gaatgtatga ttgagttaaa cggggagccg tttggggaga tgcaccaaac ctatggtggg
    18241 gattcgctca acaccgctac ctatttggct cgggtgagtt cgcctgaaca gattgaggtg
    18301 cgttatattt ccgctctcgg cacggataag ctcagtcagg gaatgttagc ggcgtggcag
    18361 gtggataata tcaacacgga ttttgtgttg cgtgacgagc accgccagcc ggggctgtat
    18421 ctgattcagt tggataaaca gggcgagcga acgttcctct attggcgaaa tcaatctgcc
    18481 gcccgttatt tgttgcaaca ccccggctat cccaaagcac tctcggcact aaacgaggta
    18541 gatatggttt acttgagcgg tatcagcctt gccatcttgc cggaaaacga ccgcactttg
    18601 ctgattgcac agttgcgtga gctcaaaaca caaggggtga aaatcgcctt tgacagcaat
    18661 taccggccga aactgtggga aagtgtggct gctgcccaag ctcactatgc cgagctgttg
    18721 caattagtcg atttagctct cgtgaccttt gatgacgagc aactgctttg gggcgatgtg
    18781 aatgagcaag ccacctttga ccgtctcact caatatggca ttcagaccat tgtggtgaaa
    18841 caaggctctc tgggggcaac ggtgttgcaa aacggggagc gtacttttgt gccaactgtt
    18901 gcggtagaga aggtggtcga taccacttcc gccggcgatt cctttaatgc cggcttcctt
    18961 aacggttact tattgggtaa agatgtcgtt acctgttgcc aacaaggaaa tgccgttgcc
    19021 ggtatcgtca ttcagcacaa aggggcgatt attgccaaat ccgccactac tcatttgaaa
    19081 tcgcagtttg aacaatccat ttagaccaac aatagcacaa cgacaagcgg ttaaatttgc
    19141 aaaatttttt acaaaagcga ccgcttgcaa tacaacataa tgaggctaga aatgcgttac
    19201 accaccgaac aaatcattga aaaattaaga caactgaaag ttgttcccgt gattgctttg
    19261 gataaagcag aagatatttt accgctggcg aaaacccttt ccgaaaacgg tttgccggtg
    19321 gtggaaatca ctttccgctc ggaagcagct gaagaggcaa ttaaattagt gcaagccaac
    19381 tatccggaag tattgattgc agcaggcaca gtgctgacca aagagcaagt cttaactgcc
    19441 aaaaacgctg gggcggattg cattgtgact ccgggtttta atccgactat cgttaagtat
    19501 tgccaagtgt taggtttgcc tgttacaccg ggtgtgaaca acccgatggc gattgaagcc
    19561 gccctcgaac ttggcataca agcagttaaa tttttccctg ccgaagccag tggcggcgtg
    19621 aaaatgatta aagccctgct cggcccttac ggcaacttac agattatgcc gaccggcggc
    19681 atctcgccac aaaacatcaa cgactacctc gccattccca acgtagtcgc ctgcggcggc
    19741 tcttggtttg tggagaaatc cctgattaag gaacagaagt gggaggagat tgggaaattg
    19801 acgaaggaag tggttgaatt ggtgaaataa ccatttaaag ttccaagcaa tgagctattt
    19861 tctacccaaa atggatctct ttcctcttat ttacaaagca taacaaatat tgcatacttt
    19921 atttagtagc atatagtagg tatatttaaa gctatatatt taacttaatg aaaaatatag
    19981 caaaacaacc tcaaaactct tcactaaagg ctattgaaaa atagcctttt ctattcaaat
    20041 aaaagatagc tttatgaaaa aaatagtctc aacgctttta atccttacct caaacctggc
    20101 atttgcggaa accacaccgg ctcaacttca agaaaaaatg gataaccagc gaatgcagaa
    20161 aaacctacat acattagaaa agcctgaacc tcaagccaaa ccacaagcgg ttaatgcaca
    20221 ggctcaccgg caatcgatct ctatttcaag ccaacagctg cttcaacagc ctgagttgct
    20281 caactcggca atgctaactg cgttggtcac taaccacact gagaatgttc aattcttact
    20341 gcctatttat caacaattac ccgccagtaa acaaaacagc gaagttgtac aatgggcgga
    20401 ggcagttaat gccaaagcaa aacaaaatta ttcagaggca ataaaaggct accgtcagct
    20461 actggcaaaa taccctgaaa atcagccaat ccgtatgcaa ttagcggttg cattgtttga
    20521 aaatcgggaa aatgaagccg cagaggctca attttataag ttacaagcgg acaaattacc
    20581 gcaagaaatt gcaaatgcgg tcaatagcta tttggaggcg attggcaagc aagatcaatg
    20641 gagttttcaa ggcggcttaa cctatttgaa tgacccgaat atcaacaatg ctccaaatgc
    20701 aggcacgacc tatggcaact ggactgcacc gaaaaaagaa tccgcccaag gggtcggctt
    20761 tcactttgag gcggataaaa agtggtcttg gggcaatggt ttcttccacg agtttcgttt
    20821 aaacggaaac ggcaaatatt actggaataa caaaaaatat aacgaatatt cgctcagaga
    20881 aagcctcggc ttgggttatc aaaatgcaaa acaaaaaatc accttgttgc cgttttttga
    20941 gcagatgtgg tatgccggtg gctcaagcca aaccgaaagc accaaacgct actccaacgc
    21001 aggcggtgtg aatgcccgct ggcaatattg gattactcca cagtggcaat ctgcaatcag
    21061 ctacgaatat gcggaacagc gttacactcg ccgccaacat ttagacggca attatcattt
    21121 tattgccccg agcctctatt tttaccctaa cagccggcaa tattggtttg tgggggcgaa
    21181 ttttaaccgc accagccccc gtgatttaga tgatagcttt attcgccgag gtgtttctat
    21241 tggttgggga caagagtgga aaaacgggct ttcaacccaa ttaagtgcca gctacgcccg
    21301 caaacaatac cgagccccaa tgccgatttt ccaaattaca caacgtaaca gtgaatatgg
    21361 tgtgcaagcc agcatctggc acagagcctt gcattttaag ggtattaccc ctcgcttaac
    21421 gtggcaatat aacaaggtaa aaagcaatca tagcttctat agttatgaca aaaaccgtgt
    21481 ctatattgag ttttcacata cgttctaaac aaaaacgccc cttaaacggg gcgatttctt
    21541 agttattttt tcaatttacc ccaacaattt tttcaagcga tacaactcgt ccaaagcctg
    21601 tcttggggta agttcatcag gctgaagggc tttcagggct ttttcaactt cattttctac
    21661 tacaagcggt tgaattgctt catttttttg caaatcaaaa ccatcggaaa acaacaaatc
    21721 cgcctgtgga tgttcgtttg cttgtttggt ttggtgggaa atttcctcca aatgtgccaa
    21781 acgctgcttt gccagttgaa tcacttgctt tggcacaccc gccaaggctg ccaccgccaa
    21841 gccgtaactt ttgctggcgg ccccctcttg caccgagtgc ataaacacaa tactgtcttg
    21901 atgttcacgc gcgtctaaat gcacatttgc cacccctttg agctgattcg gcaagccggt
    21961 aagttcaaaa tagtgggttg caaacaaagt gagtgactgg gttttcttcg ccagccattc
    22021 ggcacacgcc cacgccagtg ataagccgtc ataggtagaa gtgcctcgcc cgatttcatc
    22081 aatcagcaca aggctgtttt cggtggcttg atgcagaata ttcgccattt cggtcatttc
    22141 caccataaag gttgaacgcc ctgaagctaa atcatcgctt gccccaattc gggtgaaaat
    22201 acggtcaatc gggccgattt ccgcactttc tgccggcaca aaactgccga tatacgccat
    22261 caatgtaatg agggcaattt gccgcatata ggtgctttta ccgcccatat tcgggccggt
    22321 cacaatcaat aaatgccgtt gggaatttaa aaacaccgga ttggcaataa acggctcggt
    22381 taaaacctgc tccaccaccg ggtgtctgcc gcctttaata ttcaccattc gcatcgggct
    22441 aaagctcggg caaacatagc ctaaactatc agctcgctcg gcaaggttgg ttaagacatc
    22501 aagttcagac agcatcatcg ccgctaattg caattcgcct aagcgaggca ttaacacatc
    22561 aaacagttca tcataaagct gtttttcaag ggcaagcgat gccccttttg ctttcagcac
    22621 tttgtcttcg taagttttca gctcagggat aatataccgc tccgcatttt tgagcgtttg
    22681 gcggcgaaca tagtgaatcg gggctttgtg tgcttgccct tggctgatct gaatgtaata
    22741 gccgtgaacc gcattaaagc cgattttcag cgaatcaatg ccggtgcttt cacgttctct
    22801 gatctccaaa ttttccagat attgcgttgc cccgtccgaa agttgccgcc attcgtcaag
    22861 ctcggcatta taaccttctg caatcacccc accatcacga atgagttgtg gtgggttttc
    22921 gataatcgcc cgctccagca aatcgtgtaa cgggctgaaa tccgccagtt gagccaaaag
    22981 ctgatcgata ctagcggtca gattttgtga attttttgca atttccggta actgagccaa
    23041 tgcagtgcgt agtcgggtga ggtcacgagg gcgagccgta cgcaacgcca ctcgggcgag
    23101 aatccgctcc atatcgccga cttgttgtaa taacggctgt aaatccgaca ttcgctcata
    23161 ttgtatcaat gctgttatcg ccttttgtcg ggcttgtaat ttaccacaat ctcgaatcgg
    23221 ctgatgaatc caacgcttga gcagacggct ccccattggg gtcacacatt tatctaacac
    23281 cgccgccagc gtgttttccg tgccacccgc taagttttgg gtcagctcta aattgcgacg
    23341 agtagctgca tcgagcaaaa tagtatcgct atgttgtgcc aaatgaattg cgttaatgtg
    23401 cggtaaagcg gtgcgttgcg tttcttgggc ataatgcaag acacagccgg cagcacaaag
    23461 tgccaccacc gctttttcca ccccaaatcc ggcaagtgtt tgcgtgccga attggcgatt
    23521 tagcagctga atcgccgtta ccagctcaaa ttcccacacc ggacggcggc gtaacccttt
    23581 gtaattcgtt aaaattgagg cagcggaaaa atcttccgca tacagaattt ctgccggttg
    23641 tacacgttgt aactcggcgg atagagcctc tttgctagca agttcactga ttaaaaaccg
    23701 cccggaggtc atatctagcg tagcaatcgc aaatgtgcct ttttcttcgt aaactgccgc
    23761 caccaagtta tcttggcgtt cgggtaacaa tgcctcatcg ctaactgttc ccggcgtaac
    23821 aatccgtacc actttgcgtt ctaccggccc ttttgaggtt gctgggtcgc caatctgttc
    23881 acaaattgct accgattccc ccaacgccac caatttcgcc aaatacccct ccactgcgtg
    23941 ataaggcaca cccgccatcg gaatcggctc accggcagat tgccctcgct tggtgagcga
    24001 aatatccaac aatgctgccg ctcgtttcgc atcatcataa aacagctcat aaaaatcccc
    24061 cattcggtaa aacaatagta tgtccggatt ttgagctttg agttgcaaat attgttgcat
    24121 cattggcgta tgggtggaga aatcttgtgt catcagtcta tttattgtga gaaatcattg
    24181 ctgatagttt aacagattca gccaagggat aaaaacaagc ggtcattttt cgctgaaaat
    24241 ttgcaatggt cagccgctgt ttttttgtta caatgcacca aatttttaaa acagaggtca
    24301 gaatgttaag aaaaatagtg ctactttcta caggcttatt attggcggct tgtagcagca
    24361 atgaaccgca acaaccggaa gcattcccgg gcgaatttgc caatgccgat tatgtgcttt
    24421 cggaagaaaa tgctcaaaaa tgggtaattg ccagcgaaca ggcaaaacag tgtatctacc
    24481 ccaatttaac ccgtattcag caagagcatt tttccaaaga agattcttat attttctcac
    24541 aatatgtatt tttctatccg cttgaagaga ttatcgggga gcagtatgta aaaatcattc
    24601 aaaatgatga aaaatcaatg ggttacgctc aatatttatt caaaaaactg aaaaataacg
    24661 aagcggttga agcgttaccg aaaaaacaat gtgcgacctt acgcaccaat gcaaaaaatg
    24721 atttggcagt ggtaaaaggg cagtatcaaa gcggtatgat cgaagaaacc aatagccaag
    24781 aagggaaatc aggcgataaa gttgccacca atgataataa attcttcttc gatattatca
    24841 aatggggcag tatgttactt ctctagtgag cctcaatact cggttgtttt aaccacaacc
    24901 gagccattta tacctaccga ttgaactttt atctaaagcc tcagtcttaa aatacagttt
    24961 ttttcaatta ttttccctct tttatattta aggattttca ataaaagcat taaaaacatt
    25021 attagcattg ggcgtggcaa tggctgtttc agctacttca tttgcacaaa ccactcaacc
    25081 tactgcggct gaacaaatga acgcagttaa agcctctgtt gccgaaaaag caactgtggc
    25141 taaagaagca acaaaagaga aagcagcgga gttaaaagcc ggttctgcgg aaaaaatggc
    25201 gatagcaaaa gccaaaaccg aatcatttaa agattccgct aaaaacaaaa tggacgcagt
    25261 aaaagccacc acagcagaaa aaacggacgt gattaaagcg aaagccgcat ctgcaagcga
    25321 cacaatgaaa gtgaaagctc aggaagcaaa agccgccacc gcagagaaag ctgcaactgc
    25381 tcatgaaacc ttaaattcag ccaaaaccgc aaccgctgaa aaagcggcct caatgaaagc
    25441 agctgcaaca gaaaaaatgt cagcagtgaa aaaatcacaa aaagtgaata tcaacactgc
    25501 caacgaagag caattacaat cgcttaccgg cattggtgaa gcaaaagcca aagcgattgt
    25561 agaataccgc aaaaaacacg gtaaaatcaa aaatgcagca gaactggcga acattcccgg
    25621 cattggcgat gcaaccattg agaaagttgc tccatattta actttctaat gttctgcaag
    25681 cggttatttt gttgcaaaat tttgcagaaa aataaccgct tgttcatttc acaccttgta
    25741 ttcttaaatt tcacccccat taagtgaatc gtatttcttt caatacagta ttcaataaac
    25801 tcaaaaggaa cagaaaatgg cattagattt caattcagtt ggattagatt cagtagaagc
    25861 aaaaggcggt tacggcatcg gtttacaaat tggtcagcaa cttttaggca gcggaatgga
    25921 cgtaaacgca gaaaccgttg cccgtggtat ttatgatgtg ttaaacaaca atgagccggc
    25981 aatcgacatc aatgaagtga ccgctgcatt acaagaatta ggtcagcgtg cggaagcggc
    26041 tcaagcagaa gcattcaaag cgattgatgc cgaaaacaaa gcgttcttgg aagagaataa
    26101 aaaagcaaac ggtgtaatcg ttaccgacag cggtttacaa tatgaaattt taaccgaagg
    26161 cacaggcgaa aaaccgactg cgacttcaac cgtgcgtgtt cactacaccg gttcattaat
    26221 tgacggcacc gtgtttgaca gctcggtaaa acgcggtcag ccggcagaat tcccggtaaa
    26281 cggagtaatt cgtggttgga cagaagcatt gcaattaatg ccggttggct caaaatggcg
    26341 tttaaccatt ccacaagaat tagcctacgg cgaacgtggt gcagaagcat caattccacc
    26401 atttgcgacc ttagtgtttg aagtggaatt gcttgatatt ctctaatcaa actcaaataa
    26461 aaaacctgtg gaggcatttc acaggttttt gctatttaag ataactatat tatgcagaaa
    26521 aaatcactca tatctcgctt acttaaaaat attttcctct acggcagcct gtttatcatt
    26581 attagcctgg tggttgattg gtatcgctcg ccctccgctc cggcacaatt tgagcaaacc
    26641 gtgcattatg atattcaaca ccagccgaaa gtaatcgccc aattaagcca cgagaagccg
    26701 atgctactct atttttgggg aagttggtgc cactattgcc aagtggtttc gccaaatatc
    26761 caacaattag cgaatgacgg cacggaagtt ttaggtgttg ccctgaaatc cggcgatgaa
    26821 aatgacgtac aagcctatct caatgaaaat ggctacactt tcgctacttt gaatgaccca
    26881 agcggtgatt tctctcgagg ttggaacatt caagccaccc caaccatctt gattatcaaa
    26941 gacggtaaaa tcgcccacca caccaccggc tacactagct atttgagctt aaaattcaga
    27001 ctatggctgg cagacgtgtt gtattaaacg attcctttca tttgcaaaaa aatccactaa
    27061 atccgaccgc ttgtttacac caaaaagaca agcggtacta aattcattgt catcattgtg
    27121 gtgatcgata aaatcagcct cgatgagcca aaaataaagc ctcggttttt gccgttgtcg
    27181 aatttcacca gtaaatttgc cattgctgtg agggcgtaca cttccaccac cgtaaaaatc
    27241 acggtgtaaa tataggcagc ggtcagagtt gcgactttta ccgcaataaa ccaaggggca
    27301 ataatcgcca ccgctaataa cggcgaaatc caaattaatt gctgtttggt gaggttgatt
    27361 ttacgagaaa aagtcgattg caaactgacg gttaaaacac cgttgatgaa taacgcaatc
    27421 ggcgaatgct ccggtgcgtg caggacattg tcgaataaat acggaaaaat cactcagcgg
    27481 cacaaatagc attaagtgag cgaacaaaaa ctctttgttg atgatttcct taatttgtgc
    27541 gaaacgaaat ttcacgccgc cattcacgcc ttccaccgaa taaaacggct tgaccataaa
    27601 cgcaaacaag ccggcttcca aaataaagca gatccaaatc agcgtttcaa tcatctcaaa
    27661 cctaataaac ggaataataa tcagcggggc gagcattgaa gacatactgg tgacttttag
    27721 atatttgcct tgtaaacggg ttttagcagc atattcatcg ccggcaatcg ccagtaaaca
    27781 ggctctggca ttagtgccga ataagcaact ccccaaccca aagcaagtgg ttgccaacaa
    27841 taaaatgagg taattatccg ctgctaaaaa cagcatatag gcaaccacat ctaataaaca
    27901 gcccaataac atcatttttg ccaagccgta gcgatccccc caaatgccgg ctaaaattgc
    27961 caatgcctga ttacaaaaca acagcaatga aaggaaaaaa gcgatttggg cgttatctag
    28021 ccctttctct tttaaataaa agaaaagggg ctgtcctaga taactaacct aaactaccct
    28081 taaccaattg ttttaaaaag gatatttgag attttaagtc actgtgatta aaacgccatt
    28141 cgcattcttt caaatacagc tcaaaatgca ctttgggaat gccgttaaac ttacgcaaat
    28201 ggcgttttgc ttggctccca aaattctcaa ttccattaat gtgattttga ttttcagcga
    28261 agtgtgtgct gtgattaatg cgaaaatggt taaattcact cacatcaagc acatcataac
    28321 ttcgatagaa atcggtgtaa acaatactat cgggtttcac cttttcccga ataatcggca
    28381 aaagtgtggc aaattgcgtg tttggtacta ccacggtata aacctttccg tcccgcttta
    28441 aaagcccgaa cacggcggtt ttgcctgctg caccacgtcc acgtttacct ttacgatgac
    28501 cgccgaaata actctcatca acctcaattt ctccctcaaa catttccaaa tgagggctat
    28561 gttgatagat aagcaaccgc aagcgatgga agtaatacgc cgccgtgttt ttgtttacat
    28621 tgaccaactc agatgctgtt cgggctgtta cccctgcaac aaactgctca atgagtttgt
    28681 tttgtttgta ctgacttaga cgactttttc tcatttgggt atcttaacct aaatggagtt
    28741 tttagtcgtt atctaggaca gccccaaaga aaaacacgct ttgcattgaa aaaaaggcgg
    28801 tggtggaaat aaaacggcgt aggagtaata gtttttctaa agacattcag aatggttgaa
    28861 ttggttaaat aaagagcggt tattctacct tttaagtcaa ccccaatcaa tcggcttttg
    28921 ttttaccttt ggcgtgggtt tcggtatgat aagcgatatg tagtggcggg tcctgtgccc
    28981 gcctaaatac caatgataac ttgcgggcga gcacaggact cgcccctacg ataaacaaga
    29041 aaatgaaaga caccattgtt gctcaagcaa caccgattgg cagaggcggt gtggggattc
    29101 tgcgagtttc cggtccgctt gccgaaaccg ttgctcaagc cgtattaggc aaaacattgc
    29161 caccccgtat cgcaaattat ttgccgttta aagacgaaga tggcactgtg ttggatcaag
    29221 gcatcgcctt attttttaaa gctcccaact cctttaccgg cgaagatgtg cttgaacttc
    29281 aaggacacgg tgggcaggtt attttagatt tactgctcaa acgcatttta caagttaagg
    29341 ggctacgcat tgcccgagca ggtgaatttt ccgaacaggc atttttaaac gataagctcg
    29401 accttgccca agctgaagcg attgcggatt taatcgacgc caccagcgag caagccgctc
    29461 gttcagccct gaaatcacta cagggtgaat tttctaataa aatcaatgcg ttagttgatt
    29521 cagtaattta tttacgcact tatgtggaag cggcgattga cttccccgat gaggaaattg
    29581 actttctggc agacggtaaa atcgaggcaa aattaaatga gattatcgct caattagacg
    29641 gtgttcgccg tgaagcgaaa caaggctcga ttctgcgtga aggaatgaaa gtagtgatcg
    29701 ccggtcgccc gaatgcaggg aaatcaagct tgcttaacgc cttagccgga cgagaggcgg
    29761 cgattgtaac caatattgct ggcacaaccc gtgatgtgtt gcgtgaacat attcacattg
    29821 acggaatgcc gttgcatatt atcgacaccg ccggtctccg tgatgccagt gatgaggtgg
    29881 aacgtatcgg cattcagcgt gcttgggaag aaatcgccca agccgaccac gttttattaa
    29941 tgattgacag caccgagcaa caagccgatc agttccgaca agagtgggcg gaatttctag
    30001 ccaaactgcc ggcaaatatg cctgtgaccg taattcgcaa caaagtcgat ttatccggcg
    30061 agcaggaagg cttaattcag gtggacgatt tcacgatgat tcgcctctct gcccaaacca
    30121 aagtcggcgt tgatttattg cgtgaacact tgaagaaatc aatgggctac caaagttcta
    30181 cggaaggcgg attcttggct cgccgccgtc atctgcaagc attggaaacc gctgccgagc
    30241 atttagagcg agggcatatc cagcttactc aattcttagc cggcgaattg ttagcggaag
    30301 agttgcgtat ggtgcaaaat gccttaagtg aaattaccgg ccagttcacc tctgatgact
    30361 tattaggcaa cattttcagc tcattttgca tcggtaaata aatggcactt tttaaccgct
    30421 ttcaaaccca gtgtgcaacg catttgccga accaaaccgc ctttttaatc ggcttaagcg
    30481 gtggggtgga ttcggtggta ctactccacc tttttgcccg cacctcattt cacgttaggg
    30541 caatttatgt ccaccacggg ctaagcccaa atgcggacga ctgggcagcc ttttgcgaac
    30601 aatattgcaa gcggttaaat attcccttta ttttacaaaa ggtcagagtg gatagctcaa
    30661 acggcgttga aaacggggcg agagaagctc gttaccaagc cattcaacaa cagcttaagc
    30721 ccaatgaagt gttcgccacc gcccaccatt tagatgacca agccgaaact tttttgctcg
    30781 ccctcaagcg aggcagtgga gtcaaaggat tatcggcgat gcaagcggtc acttttttgc
    30841 aaaattttac cgtttttcga ccgctactca cttttactaa gtcagatttg atgggttatg
    30901 ccgttcaaca tcagctaggt tggattgagg acgaaagcaa tgccgataac cgttacgacc
    30961 gtaatttcct tcgcaatagc atcttgccac tactcaatca acgttggcag cacttcagcc
    31021 aaatggttgc ccgttccgct cagcattgtg cagaacagca agccttgata gaagagctat
    31081 taagcaatga actcaagtca agaacagggg aaaaacaaca actcaacatt aacggctttg
    31141 ggcaattttc acttgccaag caacagcaac ttagccgcct ttggctggaa caaaacggag
    31201 tgagaatgcc aagccaagcc cagctacaag cggtcatttc tgaactgatt tttgcaaaag
    31261 ccgataaaaa cccacaggtt aaagtcggcg aaaatattat cagacgctat caacaagcta
    31321 tttacgttac cgaagagatc gccgacattc cgccgtttga ggtagtactt cccacagaaa
    31381 ccaaagtgga attaccctat cagctcggta ctattattcg ccaacaacaa gagatcattt
    31441 gcaaaaaaaa cgggaaaaat caccgcttgc aactgcccca agagctggct caatcaacta
    31501 tttctattaa aatcgggcaa ctaggcaaag taaaatgcta cggcaaggct caacgggaag
    31561 aaatgaaaaa gatttggcaa aatcacggca tacctgtttg ggaacgcaac cgtacaccgc
    31621 tgattttttg gcaagacgaa ttagttggcc tattacctat cctctagggt gaaattgctg
    31681 atgaagcgat ttcaaacggg cttttgccac ttgagtgtaa atctgggtgg tcgataaatc
    31741 actatgcccc agcaacatct gtaccactcg caaatcagcc ccatgattga ccaaatgggt
    31801 cgcaaaggcg tggcgaagca cgtgaggcga gagtttatct gcatcaatac ctgcaagcac
    31861 ggcatagtgc ttaatccgat gccaaaacgt ctgccttgtc atctgctgac ctcgccggct
    31921 cggaaataca acatcagact gctgattatt cagcaaaata gggcgaccgt actggaaaaa
    31981 ctcctgtatc caataattcg cctcctcgcc caatggcact aaccgctctt tatccccttt
    32041 accgataatt ctcaccaccc cttgtttgag gctgatatta tccatcgaaa gcgacaccag
    32101 ctccgttacc cgcagaccgg tggcatacag cagctccagc attgctttat cccgtaactc
    32161 tatcggatct aacgtattcg gggcatctag caaatccatt acctgatctt cacttaagga
    32221 tttgggtaaa gaagcacccc gtttagggga agaaagggtt aaagtcgggt catcttggcg
    32281 ataatgctca aggcataaaa aacggaaaaa tttccttaaa caactcaaca ttctggcaga
    32341 gcttgtcgcc ttatagcctt gctccaaacg ctcgccgaga aaaccttgta agtcgatatg
    32401 atcgagagac agaaatgctt taggttcaga aaaataatcg gaaaaacgct ctaagtcaga
    32461 acgataagag gcaacggtat tttcagacaa accgtgttct tgccatagtg tatcgagaaa
    32521 ttgttcaata atagggtcaa gctcagccat acaagcgggt atattttcag gaaattttgc
    32581 aaattttaac agaattaaat ctataaaaat acaaaagcga tagaaacgaa aaaaccgatt
    32641 agcttatgct aatcggttta
//
LOCUS       DANLXD010000014        32498 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.014, whole genome shotgun sequence.
ACCESSION   DANLXD010000014 DANLXD010000000
VERSION     DANLXD010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 32498)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32498)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32498
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.014"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            151..1284
                     /gene="carA"
                     /locus_tag="PXD18_000525"
     CDS             151..1284
                     /gene="carA"
                     /locus_tag="PXD18_000525"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HDL6300987.1"
                     /translation="MFKPAILVLTDGSVFSGKSIGADGHTIGEVVFNTAMTGYQEILT
                     DPSYTKQIVTLTYPHIGNTGINLEDKESPNVCASGLIIRDLPLLHSNFRASSSLSDYL
                     IQQNIVAIADIDTRRLTRILREKGAQAGCILVGDATEENIANALAFANSFGSMAGKDL
                     AQSVTCNELYKWTDGEWQLGKGYVPQQQTEFHVVAYDYGVKHNILRMLAERGCRLTVV
                     PAKTSAEAVLALNPDGIFLSNGPGDPEPCDYAITAIRKLLETQKPIFGICLGHQLLGL
                     AAGGKTKKMVFGHHGANHPVQDLDSQKVLITSQNHGFEVDESSLPSNVRVTHRSLFDG
                     TVQGIELTDRPAFSFQGHPEASPGPNDVAYLFDRFVSEMKKVK"
     gene            1387..4593
                     /gene="carB"
                     /locus_tag="PXD18_000526"
     CDS             1387..4593
                     /gene="carB"
                     /locus_tag="PXD18_000526"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HDL6300988.1"
                     /translation="MPKRTDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     VLVNSNPATIMTDPNMADVTYIEPIEWKTVEKIIEKERPDAILPTMGGQTALNCALDL
                     SKNGVLKKYNVELIGATEDAIDKAEDRGRFKEAMTKIGLNTPKSFVCHSFEEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNRDEFIAICERGFEASPTHELLIEQSVLGWKEYEM
                     EVVRDRADNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAINPANGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLNE
                     LRNDITGGLIPASFEPTLDYVVTKIPRFAFEKFANADDRLTTQMKSVGEVMAMGRTFQ
                     ESLQKALRGLETGICGFNLLSEEPEKIRRELANPGPNRILYVADAFGAGFSLEEVHHY
                     SKIDPWFLVQIQDLVLEELALEKKQFSDLDANEIRRLKRKGFSDKRIAQLTKVSEKMV
                     RDYRHTYAILPVYKRVDTCAAEFASDTAYLYSTYEEECEAKPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHASLALREAGYETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RVENPWGVIVHYGGQTPLKLANALSDAGVNIIGTSADSIDAAEDRERFQQILNTLGLK
                     QPANRTARNALEAVALANEVGYPLVVRPSYVLGGRAMQIVYNDEELNRYMREAVSVSN
                     DSPILLDHFLNNAIEVDVDCICDGENVLIGGIMQHVEQAGIHSGDSACSLPAYSLSGH
                     VLDEIRKQTNAMAFALGVKGLMNVQFAVQNEVVYVLEVNPRASRTVPFVSKATGRPLA
                     KIAARVMAGETLADLNALEEIIPSKFFVKEAVFPFIKFPGVDTILGPEMRSTGEVMGI
                     GNTFAEAFFKAQLGAGERIPKVGKVFMSVIEEHKPALIYIAKRFQEQGYGLCATFGTA
                     NFLRQHGIAVQTVNKVREGRPHIVDAIKNGEIALVINTVSGEPEVIADSHSIRRTALQ
                     QRVPIYTTLAGADAISYGVKHINEFDVYSVQELEQKAN"
     gene            complement(4668..5459)
                     /locus_tag="PXD18_000527"
                     /pseudo
     CDS             complement(4668..5459)
                     /locus_tag="PXD18_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072249.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose isomerase"
     gene            5662..6660
                     /gene="yiaK"
                     /locus_tag="PXD18_000528"
     CDS             5662..6660
                     /gene="yiaK"
                     /locus_tag="PXD18_000528"
                     /EC_number="1.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005757429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydro-L-gulonate 2-dehydrogenase"
                     /protein_id="HDL6300989.1"
                     /translation="MRVSYEELKAQFKRVLLARNVREEIAEECATVFADTTQAGAYSH
                     GVNRFPRFIQQLENGDIVPEAVPTKVLSLGAIEQWDAHQAIGNLTAKKMMDRAMELAS
                     ENGIGVVALRNANHWMRGGSYGWQAAEKGYIGICWTNALAVMPPWGAKECRIGTNPLI
                     IAVPTNPITMVDMSCSMYSYGMLEVHRLAGRQTFVDAGFDDDGNPTRDPATVEKNLRL
                     MPMGFWKGSGLSIVLDMIATLLSNGESTAAVTEDKDDEYCVSQVYIAIEVDRLIDGKT
                     KDEKLNRIMEYVKTAERADPDVAVRLPGHEFTQILADNKANGIPVDDTVWAKLQAL"
     gene            6785..7150
                     /locus_tag="PXD18_000529"
     CDS             6785..7150
                     /locus_tag="PXD18_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HDL6300990.1"
                     /translation="MFFGHISQVKANRYPPAIQIALNYLKNTDFDAMEAGVYELKGRQ
                     IYVQVLDLNTKSKHEFQPEVHRNYLDVQYLHRGKEIMAAAVDTGTNPIAMEYNPERDI
                     QYYQSVANENEFRCVEGNF"
     gene            7214..7693
                     /locus_tag="PXD18_000530"
     CDS             7214..7693
                     /locus_tag="PXD18_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HDL6300991.1"
                     /translation="MKALAQLVGKLLEILVVVILSAMSILVFVNVVLRYGFNSSISVT
                     EEVSRYMFVWLAFLGAVLAFSENQHVKVTMLTDKLSPTARNILSVVTDLAMLFCCYLI
                     VDGSWIQFNLNLNNFAPISGLPQGITFLASTVAGVLIGLLIIARIVATVGVIAKGEK"
     gene            7694..8971
                     /locus_tag="PXD18_000531"
     CDS             7694..8971
                     /locus_tag="PXD18_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017806296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HDL6300992.1"
                     /translation="MTVVIFLSVLLGSILLGIPVAFALLVCGVALMLHLDLFDAQILA
                     QQIVSGADSFSLMAIPFFILAGEIMNEGGLSKRIIDLPMKLVGHKRGGLGFVAILAAM
                     IMASLSGSAVADTAAVVAMLLPMMKTTGYPIDRSAGLIGTAGIIAPIIPPSIPFIVFG
                     VASGVSITKLFLAGIFPGIMMGICLAALWWWQAKRLDLMTFSKATKEELCISFKNSIW
                     ALLLPVIIIGGFRSGMFTPTEAGAVATFYALIVSLFVYREMKFKDLYKVVLAAAKTTA
                     VVMFLVAAANVTGWLITVAELPMMLTELLEPLIESPTTLLLVIMLAVFIIGMVMDLTP
                     TVLILTPVLMPLVEEAGIDPVYFGVLFILNTSIGLITPPVGNVLNVITGVSKLPFDQA
                     AKGVMPYLVMMICLLLLFVFFPSLVLVPLSWMQ"
     gene            9074..10060
                     /locus_tag="PXD18_000532"
     CDS             9074..10060
                     /locus_tag="PXD18_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HDL6300993.1"
                     /translation="MKLFNLKTLFALVAGVAVMSGSAMAETSLRFGYEAPRSDTQHIA
                     AKKFDELLAAKTKGEIKLKLFPDSTLGNAQTMISGVRGGTIDIEMSGSPNFTGLEPKL
                     NVIDIPFIFKDREHVYKVLDGEVGQGLLKDLEAQGLKGLAFWDVGFRAFSNSKHPVTK
                     PEDIKGLKVRTNQNPMYIQAFTLLGGNPVPMPLSELYTALETRAVDAQEHPIGIFWSA
                     KLFEVQKHLSLTNHGYTPLIVVMNKAKFDGLAPELQTALVEAAKEAGQFQRDLNVKNE
                     KEIIEKLRKQGIEVIEQVDNAPFKAAIEAEVRKAFVEKHGDELLKKVDALAQ"
     gene            10134..11117
                     /locus_tag="PXD18_000533"
     CDS             10134..11117
                     /locus_tag="PXD18_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HDL6300994.1"
                     /translation="MKLFNLKTLAAFVAGFALFSTAQAETSFRFAYEAPRSDTQHIAA
                     KKFNDLLQEKSQKGLKLSLFPDSTLGNAQTAISGVRGGTIDIAMSSSSNFTGLEPKLN
                     VIDIPFIFKDRDHAYKALDGEIGQGLLTALEAHGLKGLAFWEVGFRAFSNSKHPITKP
                     EDIKGLKIRTNQNPMYIQAFSILGANPVPMPLSKLYTALETKAVDAQEHPIGIFWSAK
                     LYEVQKYFSFTNHGYTPLIVAINKAKFDALPAEQQTALVEAAKEAGKYQRQLNLENEQ
                     KIIDSLKKAGIEFVDNLDTTPFKDAVSAETRKAFIEKNGDGLVKAIDALAK"
     gene            11248..12732
                     /locus_tag="PXD18_000534"
     CDS             11248..12732
                     /locus_tag="PXD18_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL6300995.1"
                     /translation="MQHIIKRFGSHTAVNDVSLDIHSGEIVALLGENGAGKSTLIKIL
                     AGIYDRDEGDILFHNQKIQSAHAIEKGNKKPIAFIHQDLGLIEWMTIAENMAFVMGFP
                     RKFGLIDWAKVREQSQKALDFVGIKLSADTRVFDLSRTEKALLAIARAIAVNAEILVL
                     DEPTASLPASDVEHLFTVLNRLRSQGVGMIYVTHRLDEVIAISDRILVMRDGFPVAEG
                     QTKLYDVKGLVKAIVGEESRGRQRVDLPTDTPEILSLQNVVVGDTGPVNFRLHKGEMI
                     ALAGLRGAGQEEIGRLLFGERTLDKGEIQLDKRSYSAKDPQDAIAKGVALVAGDRTRE
                     SVFMSMTTSENLFINPVLSGHSPLKRYSRREEWGESWYKFQLFDIRPKNLFIDASALS
                     GGNQQKIVLARWMHLNTPVLILEDPTAGVDVGARAEIYDLLNKALAEGVAIIVISTDF
                     EEIAHLCNRALVFNRGEIAGELLNEEVTFANLLALASDSQSKKQ"
     gene            12927..13973
                     /locus_tag="PXD18_000535"
     CDS             12927..13973
                     /locus_tag="PXD18_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6300996.1"
                     /translation="MAQTNIKSTALEQPVSIARDGFMAWFSQMSTRYGLLWLCVLLVI
                     IFSLTTESFASMLTLNAILESKSKIALLALAATTTMIVGKIDLNVGFGIVLWHILVIT
                     LQVQYGFSWYMAILIVLVIAALYGLLNGILVALADIDSFVATLGSGTVLYAVALWHSG
                     GRQIVGDLPDEFIALNSTEIFGIPISAFYVLAVAIVMWLVTEHTPTGRCMYAVGGNPT
                     AARLNGINIKKYTIVPFIVSSVITAFTGVLISAQQGVGQASVGMDYLLPALVGAFLGS
                     TTIRPGRINVWGTVVGIAILAIGISGIQQFGGAFWVEPLFNGATLLLSITIAGYAQRK
                     RLLNQKAVQKKSTN"
     gene            13986..15095
                     /locus_tag="PXD18_000536"
     CDS             13986..15095
                     /locus_tag="PXD18_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005757420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDL6300997.1"
                     /translation="MKKAFRTTLTAIATLTAIAFGNNAFANDDPFVQEAKQLVAAATA
                     KQEKWDGPTTGPQLQKEKTVIFIASDMKNGGVLGVIDGMKEAVGVTGWKLDVLDGAGT
                     VNNQLAALNQAIARKPDAIVIGGWNPNVAKIPLQKATKNGIKLAAWHATPEPGAIDKY
                     GIFYNVTSDSDEIARLSAMLAVAESNGKAKAIILTDSLYEIALRKANVMKEVIEKCKE
                     CKVLEFIDTPLADTSSRMPNLTFSLLQKYGDDLEYALAINDLYFDFMAPSLRTAGKDK
                     PFSISAGDGSVTAYQRIRNGDKQFATVPEPLNLHGWQLVDELNRAFANEKPSGYITPA
                     HLVTKENVAFDGGENNLYAPQNGYKGAYKAIWGVK"
     gene            15200..16090
                     /locus_tag="PXD18_000537"
     CDS             15200..16090
                     /locus_tag="PXD18_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HDL6300998.1"
                     /translation="MSNKFIPKISNPRFNELVGNTFELEELFDKAIWAEGPAWSKPQQ
                     ALYFSDVKGCTMYRWTEQDGTQVFRQPSYFSNGNAFDANDNLITCEHGNRGISLTTPS
                     GEYRFLVGQLDGKRLNSPNDVVVKSDGIIWFTDPPYGILSDNEGKQSPSEIIGCYIYC
                     YDPKTDKLNIATFNTMRPNGLAFSSDEKQLFVADMSSVEFDEDGLHHLVVFDVDGNKL
                     KNRRDVAEISPGIPDGFRIKQNGVIFCSCEEGIIALLPDGTELGRFVLGKLTSNCSFG
                     DDEQTLFITCSNSVYRLTIK"
     gene            16162..17631
                     /locus_tag="PXD18_000538"
     CDS             16162..17631
                     /locus_tag="PXD18_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HDL6300999.1"
                     /translation="MDNKMNYTLGIDCGGTFIKAALFDTQGNIQALHRENVSVISEQA
                     GYAERDMSQLWAICAEVVRSTIEKSGVNPADIKAVGISAQGKGAFLLDKQNRPLGRAI
                     LSSDQRSLEIVKQWQAEGIPQQLYPITRQTLWTGHPVSILKWVQQNEPERYAQIGAVL
                     MSHDYLRFCLTGELHCEETNISESNLYNMEKGEYDQQLADLLGMPDVLEKLPPVIEPN
                     KISGYVTENAAKLTGLAVGTPIVGGLFDVVSTARCANLDDETKLNAVLGTWSVVSGIT
                     DHIDASQSLPFVYGRYAEAGKFIVHEASPTSAGNLEWFVNQWKLDYVKINQAVAQLPP
                     AASSVLFVPFLYGSNAGLGMQAGFYGMQAHHTQAHLLQAIYEGVLFSLMSHLNRMFIR
                     FPKADVLRVTGGPVKSKVWMQMLADLTGMRLEIPQMEETGCLGAALMAMQGVGLDISQ
                     VQALNNEMQVFEPNPENYAAYQTKYQRYQKLTEALNTMI"
     gene            17841..18152
                     /locus_tag="PXD18_000539"
     CDS             17841..18152
                     /locus_tag="PXD18_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HDL6301000.1"
                     /translation="MAKSLDAKREELTNEIRDILKNAEELFNETSDSSTEEYKKLKDK
                     LAKQFDDVKDRFATLKDDTVDSARTVVKQTDTLVQDNPYKAITVAGVVGLLLGVLISR
                     R"
     gene            18232..18627
                     /locus_tag="PXD18_000540"
     CDS             18232..18627
                     /locus_tag="PXD18_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HDL6301001.1"
                     /translation="MLDNIKSGFRNSLITLLEIAQVRGEMARIEINEQKNQLISVLIF
                     ILLAFVFLLVSFVSLLFGLDNYLLPEQKVKVFFSIAIIMFIAVTICGMMILSALKKQR
                     HFMQSTLTELKLDIAAFKSALTLKQNGEH"
     gene            18614..18913
                     /locus_tag="PXD18_000541"
     CDS             18614..18913
                     /locus_tag="PXD18_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301002.1"
                     /translation="MENIKMEELKLTEKELLVLKGNALRMRFKAETNKTKNEIMQPFK
                     QVKQTGLALVNSPAVKTIALDFLVKRLLSMKGISFSVLGLTAFFLLQQKHKRDDS"
     gene            complement(19000..20595)
                     /locus_tag="PXD18_000542"
     CDS             complement(19000..20595)
                     /locus_tag="PXD18_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase/oxidase"
                     /protein_id="HDL6301003.1"
                     /translation="MQRHEQLAQVQQTQKWDFIIIGGGASGLGIAVDAASRGYKTLLL
                     ESHDFAKGTSSRSTKLVHGGVRYLANGDVALVREALRERGRLAKNAAHLFKNQSFIIP
                     NYKFKDCVMYRVGLGLYDMLSGNLSLGKTENISKTEAKRRLPTLNDTGLRTGTVYQDG
                     QFDDSRLAVNMAQTVVEHGGTVLNHAKVTSLHKTPQGKIDGVTFYDELNQQEHTVFGT
                     AVINATGVFMNDILSMDHGSTKKFVVPSQGIHLVLDKSFLPSNDALMIPKTSDGRVLF
                     AVPWHEVLVVGTTDTLIENPSYEPIPLEQEVNFILETAAQYLTKKPTRDDVKAVFAGQ
                     RPLAAPEKEGQSTKEVSRSHKVLTDATSGLITITGGKWTTYRQMAEDTVEEALKVHSE
                     LGNKPCVTVNLPIHGNIPAAQVNLQDHLYVYGSDIPQLRALMTETPEYAQKIHPRLDY
                     TVAEVIWAVRHEMAQTVEDVLARRVRLLFTDARAAIDSAAKVAAIMAKELGKDEMWQQ
                     QQVIQFLDVAKHYLLVDYQPQPI"
     gene            20953..22398
                     /gene="glpT"
                     /locus_tag="PXD18_000543"
     CDS             20953..22398
                     /gene="glpT"
                     /locus_tag="PXD18_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter"
                     /protein_id="HDL6301004.1"
                     /translation="MFGPFKPAPHIAELPADKVDARYKFLRWQVFAGIFFGYAAYYFV
                     RANFDLAQKGLIEAGMYTKTDLGVIGTAAGLAYGLSKFVMAGMSDRSNPKVFLPTGLL
                     LSGLCMTLMGLMPWATSSILVMWVMIFLNGWFQGMGWPPCGRTMVHWWSKSERGTIVS
                     IWNTAHNLGGMVPGAMVLLASALYFSEYGVEATAKDVWQQALYFPGIAAMIAAIPIYL
                     VMKDTPQSCGLPPVEKWRNDYPDDYNEKTYEHDLSTKEIFVTYVLKNKLLWYIAIANV
                     FVYLIRYGVLKWSPVYLGEVKHFNIKGTAWAYTIYELAAIPGTLLCGWVSDKLFKGKR
                     GLTGFIFMILTTAAVVAFWLNPATPESEIAQYAGHAWYENPYQLMDFIWMTTIGFLIY
                     GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGTVAASAVVGWAADKFGWDGGFYVM
                     IGGGVLAILLTFIVMVEEGKHKAKLEDHYGK"
     gene            22468..23541
                     /gene="glpQ"
                     /locus_tag="PXD18_000544"
     CDS             22468..23541
                     /gene="glpQ"
                     /locus_tag="PXD18_000544"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HDL6301005.1"
                     /translation="MKFKFKTLVAALALSATALGAYAQQSDKLVIAHRGASGYLPEHT
                     LESKALAFGQQADYLEQDLAMTKDNRLIVIHDHFLDGLTDVAKKFPERKRADGRYYVV
                     DFTLDEIKTLEMTENFEVKDGKQAQVYPNRFPMWQSHFTIHTLEEELEFIQGLEKSTG
                     KKIGIYPEIKAPWLHHKEGKDIALETLKVLKKYGYDSKTSPIYLQTFDFNELKRIKTE
                     LLPKLGMDVKLVQLVAYTDWHETEEKDKNGNWVNYDYDWMFKDGAMAEVAKYADGVGP
                     GWYMLVDKEKSKVGNIVYTPLVKELAKYKMELHPYTVRKDALPDFFQNVDEMYDALLN
                     KAGATGVFTDFPDTGVEFLKKQK"
     gene            23731..25071
                     /locus_tag="PXD18_000545"
     CDS             23731..25071
                     /locus_tag="PXD18_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6301006.1"
                     /translation="MFSFLKASPPAEQKVEASRVDAEYRKLRWQVFAGVFIGYAAYYL
                     IRKNFSLAMPYLIDEYGFTKADLGTVGVALSLAYGFSKFIMGNVSDRSNPKYFITIGL
                     LGSAIVSLVFGLVPGVLSSIPIMIILAALNGWFQGMGYPPGAKTMTNWFSTSERGVWW
                     SWWNVSHNLGGGLIGPLAILGLSIFGVWQSLFYLPALIAIVLAFVMFYLMRDTPESQG
                     LPPIDEYKGEKVVEKVESAHTLSSKDIFYKYILNNKFLWAIAIANVFVYFIRYGIIDW
                     APTYLKEVKHFSVDKQSWAYFLYEYAGIFGMLASGYLSDKVFKGHRAPPMLLFLAGVL
                     IAIVVYWKNPAGNPLIDNICLVAIGFLIYGPVMMIGLQAADLVPRVATGTATGLTGLF
                     GYLLGSASAGYVMGKLVDMFGWDGGFYALILSCFLAFAFIALTLFKKTSKQLEV"
     gene            complement(25133..26113)
                     /locus_tag="PXD18_000546"
     CDS             complement(25133..26113)
                     /locus_tag="PXD18_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDL6301007.1"
                     /translation="MKQRRFGKTNKMVSEIGLGTWQLGTKWGEPFNHQEAMAILETAY
                     EQGINFIDTADVYNNGQSEKAIGDILKKYPDFFYVVTKCGRALNPHTAEMYTPQAIEK
                     FVDGSLSHLGTEKLDMILLHCPPTLVYRNDEIFTKLEQLKAGGKLIDYGVSIETAEEG
                     LLAMEYDIAAMEVIFNMFRLKPLEQLFPTAQQKNVGIIARVLLASGLLTGRYNACTQF
                     GKDDHRTFNRNGEAFDKGETFSGVDYQLGLQAVEELKALFGTEDLIPYALRWVLMNEA
                     VSTVIPGASKVSQVITNAAVDNFPPLTENEMQKVEDIYNRLIRPSVHHLW"
     gene            complement(26132..26770)
                     /locus_tag="PXD18_000547"
     CDS             complement(26132..26770)
                     /locus_tag="PXD18_000547"
                     /inference="COORDINATES: protein motif:HMM:NF036826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-1,4-xylosidase"
                     /protein_id="HDL6301008.1"
                     /translation="MPFSKEMGEVGNGVLKLIGRGSLANTHDLSLIARRWQAFYFDAE
                     TKVKFTPFSYQSMAGLTNYYNHSHWSWIFITKNDQGQQVIEVAENKGGLRNGQYTSYL
                     KDKAIVIPDGTEYVWFKTKVRKETYRYEYSFDGKQWHTIPVELDAAVLSDDYVLRSYG
                     GFFTGAFVGLAAVDYSSYESTAEFSYFDYKELGDKQLTDGSFSWEKSESCFG"
     gene            complement(26773..27819)
                     /locus_tag="PXD18_000548"
     CDS             complement(26773..27819)
                     /locus_tag="PXD18_000548"
                     /inference="COORDINATES: protein motif:HMM:NF016497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 43 protein"
                     /protein_id="HDL6301009.1"
                     /translation="MQIQNPVLPGFNPDPSIVRVGDTYYIATSTFEWFPGVRIHESKD
                     LVHWNLVKNVLDTTTLLDMRGNPSSGGIWAPDLSYAEGKFWLVYTDVKITDGAFKDMT
                     NYLTTAKEIQGPWSAPIKLNGIGFDASLFHDDDGRKYLVQQTWDHREYHHPFDGITLT
                     EFDVATMKLKPETQRTIFEGTEVKLVEGPHIYKINGEYYLFAAEGGTVFTHQEVVARS
                     KTLEAHSFQLAPNTPFITNFDTPNSYLQKQGHGSLVDTPSGEWYYASLTARPWNHATE
                     SATDPRGWSTLGREAAIQKVEFDQDGWPYIVGGHGGKTFVEAPKDAIFTEAPIDHSQH
                     DEFDSSTLDINWNT"
     gene            complement(27842..29290)
                     /locus_tag="PXD18_000549"
     CDS             complement(27842..29290)
                     /locus_tag="PXD18_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6301010.1"
                     /translation="MNRVTNKADEFAKLSTFERIAYGSGDLAQNLVFGTVGGFLLTYL
                     TTVNGISAVAGATIFLIVKWGNVFWDPFVGAFIDKSKPSAQGKYRPYLLKFGIPLVVL
                     ASLLFLPLESVRGSVIYAFLSYFATAMVYSFVNIPYGSLSASLTRDTDEIAKLTTTRM
                     TMANIANLFVYTLFPLFVQLLAPHAELKNTGFFGIELYLGDYMSAAAGPAWFKVYAVY
                     MVIGFVALMLSYFGTKERIIPTAEETDKVKYSDLVNELKRNRPLQILGLFFLIGFTFM
                     FFGNTVWPFYLKYNIGHSEWIASVGLLGSIPGIFLVFLWPKLRRTIGKKNFFYLFLGI
                     FVLGQLCLWVWQFDSFKYSPTLGYIGRFLQQWGLTSATGFMWALVPEVVTFGEFKSKK
                     RVAGIINALMGLFFKIGLALGGIIPGYINAVYGFNGSLLAQTEEALFGINLSMIWAPI
                     ILAIIAGFVMSRYPLSDTDIDHINEKITAYSK"
     gene            complement(29558..30172)
                     /gene="rsmG"
                     /locus_tag="PXD18_000550"
     CDS             complement(29558..30172)
                     /gene="rsmG"
                     /locus_tag="PXD18_000550"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HDL6301011.1"
                     /translation="MLAKLNRLLAQAEINLTDQQKEQLVGFVRLLDKWNKAYNLTSVR
                     NPDEMLVKHILDSLVVSRHLQGETFIDVGTGPGLPGIPLAIANPDKQFVLLDSLGKRI
                     TFIKNALRELGIKNVTPVQSRVEEYTESQFDGVLSRAFASLNDMIDWCYHLPTENGKF
                     YALKGVYDEQEIIEIKQPIQLVEVIKLEVPELVGERHLVVLKKP"
     gene            complement(30185..30409)
                     /locus_tag="PXD18_000551"
     CDS             complement(30185..30409)
                     /locus_tag="PXD18_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301012.1"
                     /translation="MIYLRKLGFSPFDHQMFAQPSWYFCNALVHTNYENLRQGVFVTK
                     AYLVMFLENLLFEKSHSLSNRALRINENND"
     gene            complement(30504..32396)
                     /gene="mnmG"
                     /locus_tag="PXD18_000552"
     CDS             complement(30504..32396)
                     /gene="mnmG"
                     /locus_tag="PXD18_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HDL6301013.1"
                     /translation="MIYNQIYDVIVVGGGHAGTEAALAPARMGLKTLILTHNVDTLGQ
                     MSCNPAIGGIGKGHLVKEIDAMGGLMAKATDVAGIQFRTLNNSKGPAVRATRAQADRV
                     LYRNAVRTALENQPNLDIFQQEVVDILVENNRAVGAVTKMGLTFKARAVVLTAGTFLA
                     GKIHIGLDNYAGGRAGDPAATMLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQ
                     HGDEVLPVFSFMGDVSQHPRQIPCYITHTNDQTHDLIRNSLDRSPMYTGIIEGVGPRY
                     CPSIEDKVMRFADRNSHQIYLEPEGLNTIEVYPNGISTSLPFDVQMGIVNSMKGLENT
                     RIIKPGYAIEYDYFDPRDLKPTLETKAIDGLFFAGQINGTTGYEEAGAQGLLAGINAA
                     LQVQGKEAWYPTRDQAYTGVLVDDLCTLGTKEPYRVFTSRAEYRLLLREDNADIRLTP
                     KAHELGLIDEARWVRFNQKMEAIEQERARLKSTWAHLQMPNLDELNALLANPLAREAS
                     GEDLIRRPEMSYEKLTQIALFAPAIEDKQVAEQVEIAIKYQGYIEHQYNEIERHKRHE
                     NTLIPVEFDYDKVESLSNEVRAKLMQHRPVSIGQASRISGITPAAISILLVNLKKQGM
                     LKRGEL"
BASE COUNT         9274 a         6909 c         7180 g         9135 t
ORIGIN      
        1 ttcacttccg agtagaaaat gaaataaaaa aagaagaaag aaataggcaa aataactaat
       61 ttttacttga atgcaaacgt ttgcttgatt aaacttagtc gcctacttct aaggctacac
      121 agataaaatt tgatgattag gagtaaaaca atgttcaaac cagcaattct ggttctcact
      181 gacggttctg tcttttccgg caaatccatt ggtgctgacg gtcacactat cggtgaagtg
      241 gtatttaaca ctgcgatgac cggttatcaa gaaatcctta ccgatccttc ttatactaaa
      301 caaatagtca ccctgactta cccccacatt ggcaataccg gcattaattt agaagataaa
      361 gaatccccca atgtttgtgc ctccggctta attattcgtg atcttcctct tctccatagc
      421 aacttccgtg cgtcctcctc actttcagat tatctcattc aacaaaacat tgtcgctatt
      481 gccgatattg atacccgccg tttaacccga attttacgcg aaaaaggggc acaagccggt
      541 tgtattttag taggcgatgc cacagaagag aatattgcta acgctttggc atttgccaac
      601 agtttcggtt ctatggctgg gaaagatttg gctcaaagtg tcacctgcaa tgaattatat
      661 aaatggacag atggtgaatg gcaattaggt aaaggttatg taccgcaaca acaaaccgag
      721 ttccacgtag ttgcctatga ttacggtgta aaacacaaca ttttgcgaat gcttgccgaa
      781 cgaggctgtc gcttaaccgt tgtgccggca aaaacctctg ctgaagctgt gcttgcgtta
      841 aatccggacg gtattttcct ttctaacggc ccgggggacc cggagccgtg cgattatgcc
      901 attaccgcaa tccgaaaatt attggaaacg caaaaaccca ttttcggcat ttgcttaggg
      961 catcaacttt taggtttagc ggcaggcggt aaaaccaaaa aaatggtgtt tggtcatcac
     1021 ggagctaatc acccggtaca agatttagac agccaaaaag tgctcatcac cagccaaaac
     1081 cacggttttg aagtagatga atccagctta ccatctaatg tgcgagtgac tcaccgctca
     1141 ctgtttgacg gcacggtgca ggggattgaa ctcactgata gaccggcgtt ttcgttccaa
     1201 ggtcacccgg aagccagccc ggggccgaat gatgttgcct atttatttga ccgatttgtc
     1261 agtgagatga aaaaagtgaa gtaaggacgt acctatgtgt gtccatcaag cggtcgaaat
     1321 ttgcaaaaaa cttaccaaaa atgaccgctt gtagcctgaa ataaacgaga taaaagagag
     1381 cccaaaatgc caaaaagaac agacataaac actatcctaa ttatcggtgc cggtccgatt
     1441 gtgatcggtc aagcgtgtga atttgactac tccggagccc aagcgtgcaa agcgttgcgt
     1501 gaagaagggt ataaagtggt gttggtgaac tccaaccctg caaccattat gaccgacccg
     1561 aatatggcag atgtgactta cattgagccg attgaatgga aaacggttga aaaaatcatt
     1621 gaaaaagaac gccctgatgc cattttaccg actatgggcg ggcagacagc gttgaactgt
     1681 gccttagatc tttcgaaaaa cggtgtgctg aaaaaatata atgtagagct gatcggagct
     1741 accgaagacg cgattgataa agccgaagat cgtggtcgtt ttaaagaagc aatgactaaa
     1801 atcggcttga atacgccaaa atcattcgtt tgccacagtt ttgaagaggc cttagcagca
     1861 caagagcagg ttggctttcc aaccctgatt cgcccctctt tcacgatggg aggctccggc
     1921 ggtggtattg cttataatcg agatgaattt atcgccatct gcgaacgtgg ttttgaagcc
     1981 tcgcctactc acgaattact gattgaacaa tccgtactag gctggaaaga gtatgaaatg
     2041 gaagttgtgc gtgaccgtgc cgataactgc attatcgtct gctcgattga aaacttcgac
     2101 ccgatgggtg tacacaccgg cgactccatt accgttgctc cggcacaaac gctaaccgat
     2161 aaagagtatc aaattatgcg taacgcttcg ctggcggtat tgcgtgagat cggcgtggac
     2221 accggcggtt caaatgtgca atttgcgatt aaccctgcaa acggcgagat gatcgtcatt
     2281 gaaatgaacc ctcgtgtgag ccgttcttct gcactcgcat ctaaagccac cggcttcccg
     2341 attgccaaag ttgcggcgaa attggctgta ggctacacac tcaacgaatt gcgtaacgac
     2401 atcaccggag ggctgattcc ggcttcattc gagccgactt tagattatgt tgtgaccaaa
     2461 attccacgct tcgcctttga aaaatttgcc aatgcagacg accgattaac cactcaaatg
     2521 aaatcggtag gcgaagtaat ggcaatggga agaaccttcc aagagagttt acaaaaagcc
     2581 ttgcgaggct tggaaaccgg catttgcggc tttaacttgc tttccgaaga gcctgaaaaa
     2641 atccgccgtg aacttgccaa ccccggacca aaccgtattt tgtatgttgc cgatgccttt
     2701 ggagcaggct tttcattgga agaagttcac cactattcta aaatcgaccc gtggttcttg
     2761 gtgcaaattc aagacttagt acttgaagaa ttagcgttag agaaaaaaca gtttagcgat
     2821 ctagatgcta acgaaatccg ccgcttaaaa cgcaaaggct tctcagacaa acgtatcgca
     2881 cagcttacca aagtcagcga aaaaatggtg cgggattacc gccatactta cgctattcta
     2941 ccggtgtata aacgggtaga tacctgtgca gccgagtttg cctcagatac ggcttacctc
     3001 tattctactt acgaggaaga gtgtgaagcc aaaccgtctg atcgcaaaaa agtgatgatt
     3061 ttaggcggcg gaccaaaccg tatcgggcag gggattgaat ttgactactg ctgcgttcac
     3121 gcctcgcttg ctctgcgtga ggcaggttat gaaaccatta tggtgaactg caaccctgaa
     3181 accgtttcca ccgatttcga cacctccgac cgcctctatt tcgagccgct aacattagaa
     3241 gatgtactgg aaattgtgcg tgtagaaaac ccgtggggcg tgattgtgca ttacggcggt
     3301 caaacaccac tgaaattagc gaatgcctta tctgatgccg gtgtaaacat tatcgggact
     3361 tccgccgaca gcattgatgc cgccgaagac cgtgaacgtt tccaacaaat tctaaacact
     3421 ctcggtttaa aacagccggc aaatcgcacc gcccgtaatg cgttggaagc ggtggcattg
     3481 gcaaatgaag taggctatcc gctggtggtt cgcccatctt atgtgctagg tggtcgggca
     3541 atgcaaattg tgtataacga tgaagagcta aaccgctata tgcgtgaagc ggtatcggtt
     3601 tccaacgaca gcccgatttt actcgaccac ttcctcaata atgcgattga agttgatgtg
     3661 gattgcattt gtgacggcga aaatgtactc attggcggca ttatgcaaca cgttgagcaa
     3721 gccggtattc acagtggcga tagtgcctgc tcactacctg cctattcgtt aagcggtcat
     3781 gttttggacg aaattcgcaa acaaaccaac gcaatggcgt ttgctctcgg tgtgaaaggc
     3841 ttgatgaacg tacaatttgc agtacaaaat gaggtcgttt atgtgttgga agttaaccct
     3901 cgagccagcc gtactgtacc gtttgtcagc aaagctaccg gtcgcccact ggcaaaaatc
     3961 gctgctcgcg tgatggctgg tgaaaccctt gccgacttaa atgcattaga ggaaattatc
     4021 ccaagcaaat tcttcgttaa agaagcggta ttcccattca tcaaattccc gggtgtggat
     4081 accattctcg ggcctgaaat gcgttctacc ggcgaagtga tgggcatagg taataccttt
     4141 gctgaagcgt tcttcaaagc acaactgggt gccggtgaac gaattccaaa agtcggcaaa
     4201 gtgtttatgt cggttattga agagcataaa cctgctttaa tttacattgc caaacgtttc
     4261 caagaacaag gctacggttt atgtgccacc ttcggcactg caaacttcct acggcaacac
     4321 ggaattgcag tccaaacggt aaacaaagtt cgtgaagggc gaccgcatat tgtcgatgcg
     4381 atcaaaaacg gcgaaattgc gttggtaatc aacaccgtca gcggcgagcc tgaagtgatt
     4441 gccgacagcc actctatccg ccgtaccgcc ttgcaacaac gtgtgcctat ttacaccacc
     4501 cttgcaggtg ctgatgctat ctcctacggc gtaaaacata tcaatgagtt tgatgtgtat
     4561 tcagtgcagg aattagaaca aaaggctaac taaaataaag ctaaaatgac aagcggtcag
     4621 attttgcaaa ttttttacaa attctgaccg cttgtgtttg tagaggatta tttagtaaat
     4681 ttatatgcta aatcattcca gcgtaattca tttttgagtt gtggtagctc ggtattttgg
     4741 ttgatatgga taaactcaat accaaaatat tcagcgaaca ttcgtagcat atcggcatca
     4801 atatctaaac taaatacact atgatgagca ccgccggcta gaatccatgc ttgagtacct
     4861 acataaaaat ttggttgaag cttccaaaaa gcatgcccaa ctggtaaatt tggcattgga
     4921 tttggtgagg cgatagcgtc taaatccgca acaaccattc taaaacggtc tcccatatct
     4981 acaacggttg cattcactgc ttttcccgcc ttactactga aaattaagcg aacaggatct
     5041 gccttaccgc caatacctag cggtcgaatg gctaatgttg atttctcttt ggcaatagac
     5101 ggacaaactt caagcatatg agcccccaat accacttggt tttgttcatc taaatcatag
     5161 gtgtagtctt ccataaagga agaaccgttt ggtaagccat aacccatcac tttcacttca
     5221 cgcacaagag ctgcggtttt ccaacctcct tcaccaccaa atccgtagcc ttgttccatt
     5281 aaacgctgaa cagccaagcc cggtaattgt ttaatcccat ttagattttg gaaattatca
     5341 gtaaaagctt taaatccacc attatctaag aatgttttta agccgatttc aatacgagca
     5401 gaatatgcga gagattctct tgctgaacca ttttcttgca agctatcctc aacattatac
     5461 aagcggtcag attttgcaaa aaaatgaccg cttgttgcca tttctaaagt gtgatctacc
     5521 tctcaaattt acaaaatttt ttataacata ttgatttaaa atgtttttta tatttttcct
     5581 ttaattgact ttaatttgtc ttaagagtaa cttataaaac gtgattttac tatttgaaat
     5641 attgaggtat tcaagatgac tattcgagtt tcctatgaag aattaaaagc tcaatttaaa
     5701 cgtgttctgt tggctcgcaa tgtgcgtgaa gagattgccg aagagtgtgc cactgtgttt
     5761 gccgacacca ctcaagcggg tgcttattca cacggggtaa accgtttccc acgctttatt
     5821 cagcagttag agaacggtga tattgtgccg gaagccgtgc cgactaaagt gctttcactg
     5881 ggggcgattg agcagtggga cgctcaccaa gccatcggta acttaaccgc aaaaaaaatg
     5941 atggacagag caatggagct tgcatctgaa aacggcatcg gcgtagtggc gttacgtaat
     6001 gcaaaccact ggatgcgtgg cggttcttac ggatggcagg cggcagagaa aggctatatc
     6061 gggatctgct ggacgaacgc ccttgcggta atgccgcctt ggggggcgaa agagtgccgt
     6121 atcgggacta acccgttaat cattgcggtg ccgactaacc caatcacgat ggtggatatg
     6181 tcttgctcaa tgtactcata cggaatgttg gaagtgcatc gccttgctgg tcgtcaaacc
     6241 tttgtcgatg ctggttttga tgatgacggc aacccaaccc gtgatccggc aacggtcgag
     6301 aaaaacctcc gtctaatgcc gatgggcttc tggaaaggtt cgggcttatc gattgtgtta
     6361 gatatgatcg ccaccttgct ctctaacggt gaatccactg cggcagtcac cgaagataaa
     6421 gacgatgaat attgcgtgtc gcaagtttat atcgctattg aagtggatcg cttaattgac
     6481 ggcaaaacca aagacgaaaa actcaaccgt attatggaat atgtgaaaac cgcagaacgt
     6541 gccgaccctg atgtggcagt acgtttaccg ggccacgagt tcacccaaat tctagccgat
     6601 aacaaagcca acggcattcc ggtggatgac accgtttggg cgaaattaca ggcgttgtaa
     6661 ttgcaaattg accggtaggg tgggcgtaag cccacgcatt agacacaatc ataagatgac
     6721 gtgggcttac gcccacccta caagcggtca tttttccgca gaattttaca aaacggaggt
     6781 atgaatgttt tttggtcata tttcacaagt taaagcgaat cgatacccgc cggcgatcca
     6841 aattgcgttg aactatctga aaaataccga ttttgatgcg atggaagcag gggtttacga
     6901 actcaaaggc agacaaattt atgtgcaggt gttggatttg aacaccaaat cgaaacacga
     6961 atttcagccg gaagtgcatc gcaattacct cgatgtgcag tatctacacc gaggcaaaga
     7021 gataatggct gcggcggtgg ataccggcac caatccgatt gcgatggaat acaaccctga
     7081 gcgggatatt caatattatc aatccgttgc caacgaaaat gaatttcgct gcgttgaagg
     7141 caatttttga cggcacggaa accattcgca aagtggtggt aaaaattgcg atgagcgaaa
     7201 ttgaggagca acgatgaaag ccttagctca attagtcgga aaactgttag aaatcttggt
     7261 ggtggtgatt ttatccgcaa tgtcgatttt ggttttcgtc aatgtggtac tacgttacgg
     7321 ttttaacagc agcattagcg tgaccgaaga ggtgtctcgc tatatgtttg tttggttggc
     7381 gtttttaggg gcggtgttgg catttagcga aaatcaacac gttaaagtca caatgctgac
     7441 cgataaatta tcgccaacgg ctcgtaatat cttaagcgta gtcacagatt tagcgatgtt
     7501 gttctgttgc tacttaattg tggacggtag ctggattcaa tttaacctca acctgaataa
     7561 ctttgccccg atttcaggct taccgcaagg catcactttc cttgccagca cagtggcagg
     7621 ggtattaatc ggtttattaa ttattgcccg cattgtggca acggttggcg tgattgcaaa
     7681 aggagaaaaa tagatgactg tggtaatttt tctttccgtc ttgcttggct cgattttatt
     7741 gggcattccg gtagctttcg ccctgttggt ctgcggtgtg gcgttaatgt tgcatttaga
     7801 tctgttcgat gcccaaattt tggctcaaca aattgtgagc ggtgcagaca gtttctcgct
     7861 aatggcaatt ccgttcttca ttcttgccgg tgaaattatg aacgagggcg gtctctccaa
     7921 acggattatc gacctgccga tgaaattagt cggtcataaa cggggcggtt taggttttgt
     7981 agcaatttta gcggcgatga ttatggcaag cctttccggt tcggcggtgg cggataccgc
     8041 agcggtagtc gcaatgctac tgccgatgat gaaaaccacc ggttatccga ttgaccgctc
     8101 tgccggttta atcggtacgg cagggattat cgccccaatc attccgccaa gcattccgtt
     8161 tatcgtattt ggtgtggcta gtggcgtgtc cattaccaaa ctgttcttag ccggtatttt
     8221 cccgggcatt atgatgggga tctgcttggc tgccctttgg tggtggcagg caaaacgttt
     8281 ggatttaatg accttctcca aagcgaccaa agaagaactt tgcatttcat ttaaaaacag
     8341 tatttgggcg ttattgttgc ctgtcattat tatcggtggt ttccgctcgg gaatgttcac
     8401 cccaaccgaa gcgggtgcgg tcgcaacttt ctatgccttg attgtttcac tgtttgttta
     8461 ccgtgaaatg aagttcaaag atttatacaa ggtagtgttg gcggcagcga aaaccacggc
     8521 agtagtgatg ttcttagtgg cagcggcaaa tgtgaccggc tggctgatta ccgtagcgga
     8581 attaccgatg atgctcaccg agctgttaga gccgttaatt gaaagcccga ccacactctt
     8641 attggtgatt atgttagcgg tgtttattat cggaatggtg atggacttaa ccccaaccgt
     8701 gctgatttta acgccggtat taatgccgtt ggtggaagag gcaggcattg acccggttta
     8761 cttcggtgtg ctgtttattc ttaacacctc catcggcttg attacaccac cggtcggcaa
     8821 cgtgctaaac gtgattaccg gcgtgtcgaa actgccgttc gaccaagcgg ctaagggcgt
     8881 aatgccttac ctcgtaatga tgatttgttt actactgttg ttcgtgttct tcccgtcact
     8941 ggtgttagtg ccgttaagct ggatgcagta atggtttgaa ccgaaacaag cggtcgaatt
     9001 gacgcaaaaa tttgcaaatt tttttggcaa aacagaccgc ttgcaactca atttttaatc
     9061 acaggagaac cctatgaaat tatttaattt aaaaacctta tttgccttag tggcaggcgt
     9121 tgcggtaatg agcggctctg caatggcaga aacctcactg cgttttggtt atgaagcccc
     9181 acgttccgat acccaacaca tcgccgccaa aaaattcgat gaattattgg cagcaaaaac
     9241 caaaggtgaa attaaattaa aactgtttcc ggacagcacc ttaggtaatg ctcaaacgat
     9301 gatcagcggc gtgcgtggcg gtactatcga cattgaaatg tccggctcgc caaactttac
     9361 cggcttagag ccaaaactaa atgtgattga tattccgttt attttcaaag atcgtgaaca
     9421 cgtttacaaa gtattagacg gcgaagttgg tcaaggctta ttaaaagatt tagaagccca
     9481 aggcttaaaa ggcttagcct tctgggacgt tggcttccgt gctttctcca actcaaaaca
     9541 ccctgtgacc aagccggaag acatcaaagg cttaaaagtc cgcaccaacc aaaacccgat
     9601 gtacattcaa gccttcacct tactaggcgg caacccggtg ccaatgccac tttctgagct
     9661 ttacaccgca ctcgaaaccc gtgccgttga tgcccaagaa cacccaatcg gcattttctg
     9721 gtcggcaaaa ctgtttgaag tacaaaaaca tttaagttta accaaccacg gctacacccc
     9781 gttaatcgtg gtgatgaaca aagcgaagtt tgacggctta gctcctgaat tacaaaccgc
     9841 attagttgaa gccgcaaaag aagccggtca attccaacgt gatctcaacg tgaaaaacga
     9901 aaaagagatc atcgaaaaat tacgcaaaca aggcatcgaa gtgatcgaac aagtggataa
     9961 cgccccgttc aaagcagcga ttgaagcgga agtccgcaaa gctttcgtgg aaaaacacgg
    10021 cgatgaatta ttgaaaaaag tggatgcgtt agcacagtaa ttgactttat tttagtctaa
    10081 agctccctcc gtttgggggg agttgttgta tagactctac tataggagag actatgaaac
    10141 tgtttaattt aaaaacttta gccgctttcg ttgccggttt tgcactgttt tcaaccgcac
    10201 aagcagaaac ctcattccgc tttgcgtatg aagctcctcg ttctgatact caacatattg
    10261 cagcgaaaaa atttaatgat ttgctgcaag aaaaatccca aaaagggctg aaattaagcc
    10321 tcttccctga tagcacgctc ggcaacgcac aaacggcgat tagcggtgtg cgtggcggta
    10381 ctattgatat tgcaatgtcc agctcctcta actttaccgg gttagaacca aaactgaatg
    10441 tgattgatat tccgtttatt ttcaaagaca gagaccacgc ctataaagcc ttagatggag
    10501 agattggtca aggtttatta accgcattag aggctcacgg tttgaaaggg ttggcgtttt
    10561 gggaagttgg tttccgagcg ttttccaact ccaagcaccc gatcaccaaa ccggaggata
    10621 ttaaaggctt aaaaatccgt actaaccaaa acccgatgta tattcaagcc ttctctattt
    10681 taggtgcaaa tccggtgcca atgccgcttt ccaagcttta cactgcactg gaaaccaaag
    10741 cggttgatgc ccaagaacac ccaatcggca ttttctggtc ggcaaaactc tatgaagtac
    10801 aaaaatattt cagctttact aaccacggtt acaccccgtt aattgtggcg attaacaaag
    10861 cgaaatttga tgcactgcca gccgagcaac aaaccgcatt agttgaagcg gcaaaagaag
    10921 ccggaaaata ccaacgccaa cttaacctag aaaatgagca gaaaattatc gactcgctca
    10981 aaaaagcagg tattgaattt gtggataact tagataccac accgttcaaa gatgccgtat
    11041 cggctgaaac ccgcaaggca tttatcgaga aaaacggtga tggcttagtt aaagccattg
    11101 atgcattggc gaagtaaaaa tagagctaca aagtgctcgg ttaaactaac ctcacacgaa
    11161 tcgtgtgagg tacaagcggt caaaatccgc aaaattttta cacatctttc ctcaaaggag
    11221 gaacaaatgg cacagcccat tttaagtatg cagcacatca tcaaacgctt tggtagccat
    11281 acggcggtga atgatgtcag ccttgatatc cactcaggcg agatcgttgc cttactcggt
    11341 gaaaacggtg caggtaaatc gaccctaatc aaaatccttg ccggtattta tgaccgtgac
    11401 gagggtgata ttcttttcca taaccaaaaa atccaatctg cccacgctat tgagaaaggc
    11461 aacaaaaagc ccatcgcttt tatccaccaa gatttaggcc taatagaatg gatgacgatt
    11521 gccgaaaata tggcatttgt aatggggttc cctcgcaaat ttggcttgat tgactgggcg
    11581 aaagtgcgag agcagtcgca aaaagccctt gattttgtag gcattaaact ctctgccgac
    11641 actcgagtgt ttgatttaag ccgtaccgaa aaagccttac tcgccattgc ccgtgcgatt
    11701 gccgtcaatg cagaaatctt ggttttagac gaacctactg cttccctacc tgcctctgat
    11761 gtagagcatc ttttcactgt gttaaaccgc ttacgttccc aaggtgtggg aatgatttat
    11821 gtgacccacc gtttagatga agtgatcgcc atttccgacc gcattttggt gatgcgggac
    11881 ggtttcccgg ttgcagaagg gcaaaccaag ctctatgacg tcaaaggctt ggtcaaagcg
    11941 attgtaggcg aagagagccg tggcagacag cgggtggatt taccaaccga tactcctgaa
    12001 attttaagcc tgcaaaatgt cgtggttggc gacaccggcc cggtgaattt ccgtctgcac
    12061 aaaggtgaga tgattgccct tgccggcttg cgtggagcag ggcaggaaga aatcggccgc
    12121 ttattatttg gggagcgaac cttagacaaa ggcgaaattc agttagacaa gcggtcatat
    12181 tctgctaaag atccgcaaga tgcgatagcc aaaggtgtgg cattggttgc gggagaccgc
    12241 acccgtgaaa gcgtgtttat gtcaatgact accagtgaga acctgtttat caacccggta
    12301 ctaagcggtc attcaccatt aaaacgctac tcccgccgtg aagagtgggg tgagagctgg
    12361 tacaaattcc aactattcga tattcgtccg aaaaatttgt ttattgatgc cagtgcgtta
    12421 tccggtggta atcagcagaa aatcgtgttg gcacgttgga tgcacctcaa tacgcctgtt
    12481 ctgattttag aagacccgac tgccggcgtg gatgtaggag caagggcaga gatttacgac
    12541 ttgctcaaca aagcccttgc agaaggggtc gcaattattg tgatttccac cgactttgaa
    12601 gagatcgctc atttgtgtaa ccgagcatta gtcttcaacc gaggggaaat tgccggtgaa
    12661 ctactgaacg aagaggtgac tttcgccaat ttgctggcgt tggcatcgga tagtcagtcg
    12721 aaaaaacaat aacttactct cgcccgcttg cgggagagag acagctaaaa atagcgtcag
    12781 gctattttta gcagagagag ggtaaacaag cggtcatttt tcttaaaaaa tattgcgaac
    12841 cctctccctc cgaaagccta acggctttct cctccctctc ccgcaagcgg gcgaggggaa
    12901 aatgcagaat tttaacggag taatttatgg ctcaaacaaa catcaaatca accgcactgg
    12961 aacaaccggt atctatcgcc cgtgacggtt ttatggcatg gttttcacaa atgtccactc
    13021 gttatggctt actgtggtta tgtgtgttat tggtgattat tttctcactt accaccgaat
    13081 ctttcgcctc aatgctgaca ttaaatgcga ttttagaaag taaatcgaaa attgccctac
    13141 ttgctttggc agccacaact acaatgattg tcggcaaaat cgacctgaac gtgggtttcg
    13201 gtattgtgtt gtggcacatt cttgtgatta ctctgcaagt ccaatacggc ttctcgtggt
    13261 atatggcgat cttaatcgtg ttagtgattg ccgctcttta cggcttgctg aatgggattt
    13321 tagttgctct tgctgatatc gatagctttg tggcaacact tggctcaggc acagtgcttt
    13381 atgccgtagc actctggcac tcgggcggtc gccaaattgt cggggattta cccgatgaat
    13441 ttatcgcact caacagcaca gaaattttcg gtatcccgat ttctgctttc tatgtgctgg
    13501 cagtggctat cgtaatgtgg ttggtgacag aacatacccc gaccggtcgt tgtatgtatg
    13561 cggttggtgg caacccaacg gcagctcgcc taaatggtat caatattaaa aaatacacca
    13621 ttgtgccgtt tattgtctct agtgtaatca ctgctttcac aggcgtattg atctctgctc
    13681 aacaaggcgt tggtcaggca agtgtcggta tggactactt actgcccgca ttggttgggg
    13741 cattcttagg gagtaccact attcgcccag ggcgtattaa cgtatgggga acagtggtgg
    13801 ggattgccat tcttgccatc ggtatttcag gtattcaaca attcggtgga gcgttctggg
    13861 ttgagccact ctttaacggt gcaacactgt tactttccat cactattgca ggctatgccc
    13921 aacgcaaacg cttgttaaat caaaaagctg tacagaaaaa atcgaccaac taagaggatt
    13981 tgattatgaa aaaagcattt cgtacaacct taactgcaat cgcaacctta actgctattg
    14041 ctttcggaaa taatgcgttt gccaatgacg acccgttcgt acaagaagca aaacagcttg
    14101 tcgcagcagc tacggctaag caagaaaaat gggacggacc gacaaccggc cctcaattac
    14161 aaaaagagaa aactgtgatt tttattgcct ctgatatgaa aaacggtggt gtacttggtg
    14221 tgattgacgg aatgaaagaa gctgttggcg taacgggctg gaagttagat gtattagacg
    14281 gtgcaggtac ggtaaacaac caactcgccg cacttaacca agcgattgcc cgcaaaccgg
    14341 atgcgattgt gattggtggc tggaacccga atgtggcgaa aatcccacta caaaaagcga
    14401 ctaaaaacgg cattaaactt gcagcttggc acgcaacacc ggagccgggt gcgattgata
    14461 aatacggcat tttctacaac gtgacctctg actcagacga aattgcacgc ttatcggcaa
    14521 tgcttgcggt ggcagaatct aacggtaagg caaaagcgat tattttaacc gactcgctat
    14581 atgaaattgc gttacgcaaa gcgaacgtca tgaaagaagt tatcgaaaaa tgtaaagagt
    14641 gtaaggtgtt agagtttatc gacacgccat tggcggatac ctcaagccgt atgcctaacc
    14701 tcactttcag cttactgcaa aaatatggcg acgatttaga gtatgcgttg gcaattaacg
    14761 atctctactt tgactttatg gctccgtctt tacgcaccgc tggtaaagat aaaccgttta
    14821 gcatttccgc aggtgatggc tcagtaacgg cttatcaacg tattcgcaat ggtgataaac
    14881 agtttgcaac cgtccctgag ccacttaact tacacggctg gcagttagtc gatgagctaa
    14941 accgtgcttt cgctaacgaa aaaccgtctg gttatatcac accggctcac ctagtgacta
    15001 aagaaaatgt ggcgtttgac ggtggtgaaa acaacctgta tgccccacaa aacggttaca
    15061 aaggcgctta caaagcgatt tggggcgtga agtaatgacg taggggcaaa taaatatttg
    15121 cctcgaacaa gcggttgttt tttgcaaaga ttttgcgaaa tttaaccgct tgtcataaaa
    15181 aatagagagg gtaatacaaa tgagcaataa atttatcccc aaaatctcca accctcgttt
    15241 taatgagctg gttgggaata cgtttgaact tgaagagctt tttgataagg caatctgggc
    15301 agaagggccg gcgtggagca agccacaaca agccctctat tttagtgatg taaaaggttg
    15361 cacaatgtac cgctggacag agcaagatgg tacacaggtt ttccgccagc cgtcttattt
    15421 ttctaacggc aatgcgtttg atgcaaacga caacttgatt acctgtgaac acggcaatcg
    15481 aggtatcagt ttaaccacgc caagcggtga atatcgtttt ttggtcggtc aattagacgg
    15541 aaaacgactg aactcaccca atgatgtggt ggtaaaatca gacggcatca tttggttcac
    15601 tgatccacct tacggtattt tgtcggataa cgaaggcaaa cagtcgccaa gcgaaattat
    15661 cggttgttat atttactgct atgatccgaa aaccgacaag ctgaatattg caactttcaa
    15721 cacgatgcga ccaaacggct tggccttctc gtcagacgaa aaacaactct ttgtggcaga
    15781 tatgtcgagc gtggaatttg acgaagatgg cttacaccac ttagtcgtat ttgatgtgga
    15841 cggtaataaa ctaaaaaatc gccgagatgt ggcggaaatt agtcccggca ttccggacgg
    15901 cttccgaatt aaacaaaacg gcgtaatttt ctgctcttgt gaagagggaa ttattgctct
    15961 tttacctgac ggcacggagc tgggacgatt tgtgctgggt aagctaacct caaattgtag
    16021 ctttggcgat gatgaacaaa cactgtttat tacttgttcg aatagcgttt atcgtttaac
    16081 aattaaatag cagaatgcat taagtgcgtc tgttgtagca ttacaagcgg tttctttttc
    16141 aaaatttttt acaaacaaat aatggataac aaaatgaact acacactcgg cattgattgc
    16201 ggtgggactt ttatcaaagc cgctcttttt gatacacaag gtaatattca agcccttcat
    16261 cgtgaaaacg tttcggtaat cagtgaacag gcaggttatg cagagcgtga tatgtcacaa
    16321 ctctgggcta tttgtgcgga agtagtgcgt tcaaccattg aaaaaagtgg ggtaaaccca
    16381 gcggatatta aagcagtagg gatttccgct caaggcaaag gggcgttttt actggataag
    16441 cagaatcgac cgttggggcg tgcgatttta tcttccgacc aacgttccct tgagattgtt
    16501 aaacaatggc aggctgaagg cattccgcaa caactttacc cgattacccg ccaaactctt
    16561 tggacaggac accctgtgtc gattttgaag tgggtgcagc aaaatgaacc ggagcgttat
    16621 gcacaaatcg gggcggtgtt gatgtcgcac gactatttgc gtttttgctt aaccggtgag
    16681 ttgcattgcg aagagaccaa catttccgaa agcaatcttt acaatatgga aaaaggcgaa
    16741 tacgaccaac agttagccga tttgttggga atgccggatg tgttggagaa attaccacca
    16801 gtgattgaac cgaataaaat ttcgggatat gtgactgaaa atgccgccaa attaaccggt
    16861 ttagcggtgg gtacgccgat agtcggtggc ttgtttgatg tggtttctac cgcacgttgt
    16921 gccaatttag atgacgaaac caaactgaat gcagtgctgg gaacgtggtc ggtggtgagc
    16981 ggcattaccg atcatattga tgcaagccaa tcattacctt ttgtttatgg gcgttatgcc
    17041 gaggcaggga aatttatcgt ccacgaagca agcccgactt ctgccggtaa tttagagtgg
    17101 tttgtgaatc agtggaaact cgattatgtg aaaatcaacc aagctgttgc ccaattaccg
    17161 ccggcggcaa gctcggtgct gtttgtgccg tttctgtatg gctcaaatgc aggcttagga
    17221 atgcaagccg gtttctatgg tatgcaagcc caccataccc aagcccatct cttgcaggca
    17281 atttacgaag gagtgttgtt tagcttgatg agccatttaa accgtatgtt tatccgcttt
    17341 ccaaaggctg acgtgctgcg agttaccggc ggaccggtga aatctaaagt ttggatgcaa
    17401 atgttggccg atttaaccgg aatgcggctt gaaataccac aaatggaaga aaccggctgc
    17461 ttgggtgcgg cattaatggc aatgcaaggg gttgggctgg atataagcca agttcaagcc
    17521 ctaaataatg aaatgcaggt gtttgagcca aatccggaaa attatgcggc ttatcagacg
    17581 aaatatcagc gttaccaaaa attaactgaa gcattaaata caatgattta acctgaattt
    17641 atgcttttac aagcggtaat atttggttac ttttttgcaa aaattactgc ttttttgttt
    17701 atttaattta tgaatttaat taaataatct ttaaattaaa ggttgacatt attaaatgtg
    17761 ggctgtattt taataatgaa acataaatca attatgtttt atttttatag attacgttta
    17821 attaaataag gagagcaatt atggctaaaa gcttagatgc aaaacgtgaa gagttaacaa
    17881 acgagattcg cgatattttg aaaaatgcag aggaattatt taatgaaaca tctgattctt
    17941 ctacggagga atataaaaag ttaaaagata aattagcaaa acagtttgat gatgtaaaag
    18001 atcgttttgc aacattaaaa gatgataccg ttgatagtgc aagaactgta gttaaacaaa
    18061 ctgatacctt agttcaagat aatccgtata aagcaattac cgttgccggt gtggtagggt
    18121 tattattagg tgttttaatt tctagaagat aattatctgt aattcgtcat taagtcatta
    18181 agccacgcca tatttggggt ggcttattat ttaatataag gaatggttat aatgttagat
    18241 aatattaaat ccggatttag aaatagtctc attacattat tggaaatagc tcaagtgcgt
    18301 ggtgagatgg caagaattga aattaatgag caaaaaaatc aattaatttc agtacttata
    18361 tttatcttat tggcttttgt atttttatta gtttcttttg tgagtttatt atttggttta
    18421 gataattatt tgttacccga acagaaagtt aaagtattct tttctattgc cattattatg
    18481 tttattgctg tgactatttg cggaatgatg atactttctg ccttgaaaaa acaacgccat
    18541 tttatgcaaa gtacattaac cgagctaaaa ttagatattg ccgcatttaa gagtgcttta
    18601 actttgaaac agaatggaga acattaaaat ggaagagctt aaattaaccg aaaaggaact
    18661 tctagttcta aaaggtaatg cacttagaat gcgatttaaa gcggaaacca ataaaaccaa
    18721 aaatgagatt atgcagcctt ttaaacaagt gaaacaaaca gggcttgcac tggtcaattc
    18781 accggcagtt aaaaccattg cattagattt tttggtaaaa agattattga gtatgaaagg
    18841 aattagcttt tctgtattgg ggttaacagc attcttttta ttacaacaga aacataaaag
    18901 agatgatagc taatatacaa gcggttaaaa tggtttaaaa agttgcaaat aacgtaattg
    18961 caatattttt atcgatttta accgcttgct tttagcgtat tagattggct gtggctgata
    19021 atctaccaat aaatagtgct tcgcaacatc aaggaactgg ataacttgct gttgttgcca
    19081 catttcatct ttacctaatt ctttcgccat aatagcagcc acttttgctg cactatcaat
    19141 cgccgctctc gcatcagtga agagcaaacg aacacggcga gctaatacat cctcaaccgt
    19201 ttgtgccatt tcgtggcgaa ctgcccagat cacttctgca acggtataat ctagtctcgg
    19261 atggattttt tgtgcatatt ccggggtctc agtcattaag gcgcgtaact gtggaatatc
    19321 tgagccatat acatatagat gatcttgtag attcacttgt gctgccggaa tattaccgtg
    19381 aatcggtaag ttgacggtca cacaaggttt attgcctagt tcagagtgga cttttaacgc
    19441 ttcttctacg gtatcttctg ccatttgacg ataagttgtc catttaccac ctgtaatcgt
    19501 aatcaaaccg ctggttgcat cagtgagaac tttgtgacta cgagatactt ctttagtgct
    19561 ttgaccttct ttttccggtg ccgcaagcgg acgttgaccg gcaaagactg cttttacatc
    19621 atcacgagtt ggtttttttg tcagatattg tgcggctgtc tctaaaataa agttcacctc
    19681 ttgttccaat ggaattggct cataagaagg attttcaatc agagtatctg ttgtccctac
    19741 gactaacact tcgtgccaag gtacagcaaa taacactcgt ccgtcagagg tttttggaat
    19801 cattaacgca tcattacttg gtaagaatga tttatctaat actaagtgaa tcccttggct
    19861 tggtacgaca aattttttcg tgctaccgtg atccatactt aaaatatcat tcataaatac
    19921 gccggttgcg ttaatcaccg cagtgccgaa aacagtatgt tcttgttgat tgagttcatc
    19981 gtagaaagtc accccatcaa ttttgccttg tggcgttttg tgcagtgaag tcactttggc
    20041 gtgatttagt actgtaccgc cgtgctctac taccgtttgt gccatattca ctgcaagacg
    20101 tgagtcatca aattgcccat cttgataaac agtgcctgta cgtaaaccag tatcatttaa
    20161 ggttggtaaa cgtcttttcg cttcagtttt actgatgttt tcagtctttc ctaaactcag
    20221 gttgcctgaa agcatatcgt ataagcctaa accaacacga tacattacac agtctttgaa
    20281 tttgtagttt ggaataataa agctttggtt tttaaataaa tgagctgcat ttttagctaa
    20341 acgacctcgt tcacgcaatg cttctctcac gagtgcaaca tcgccatttg caagatagcg
    20401 aacgccaccg tggactaatt ttgtgcttcg gctcgatgta cctttcgcaa agtcatggct
    20461 ttctaataat aaggttttat agccacggga agctgcatct accgcaatcc ccaaaccact
    20521 tgcgccacca ccgataataa taaaatccca tttttgcgtt tgttgtactt gagctagctg
    20581 ttcatgtctt tgcatttttt gctccttttg ctcgaattaa aacatttaat cattacttaa
    20641 ttagcataaa cgaaaataaa atgacttcaa agacatttgt ttaaaaatta gatctatgtc
    20701 acaaaatatt tctatattgt actttttatg gttctttctc tgtacataag aagagagttt
    20761 tatcgctaga gatactgatg tttgattttc tttttcaatc attttttgtg gtttaaggta
    20821 aattttttgt gaaatgaatc acatttttat aaaaaataac tttgtcattt tttattttca
    20881 tttattattg cttccctaat ttcctaaaaa ggaattactc agaggtttta ctaagtaata
    20941 ttggagaata ctatgtttgg tccatttaaa cccgctccgc acattgcgga attaccggcg
    21001 gacaaagtcg atgcaagata taaattcttg cgttggcaag tgtttgcagg aattttcttc
    21061 ggctatgccg cttactattt tgtgcgtgca aacttcgact tagcacaaaa aggcttgatt
    21121 gaagctggta tgtatacaaa aaccgatctc ggtgtgattg gtacagctgc cggcctggcc
    21181 tacggtttat caaaattcgt gatggcagga atgtccgacc gctctaaccc gaaagtattt
    21241 ttaccgaccg gattgttact ttcaggtcta tgtatgaccc ttatgggctt aatgccttgg
    21301 gcaacatcaa gcattttagt aatgtgggta atgatcttct taaacggctg gtttcaaggt
    21361 atgggttggc caccgtgtgg acgaacaatg gttcactggt ggtctaaatc tgagcgtggt
    21421 actatcgttt ctatctggaa taccgctcac aacttaggcg gtatggtgcc gggggcgatg
    21481 gtgctattag caagtgcgct ctatttcagt gagtatggtg tagaagcaac ggcaaaagat
    21541 gtatggcaac aagcccttta tttcccggga attgcagcaa tgatcgcagc tattccaatc
    21601 taccttgtga tgaaagatac tccacaatct tgcggtttac cgccagttga aaaatggcgt
    21661 aacgactacc ctgacgacta taacgaaaaa acctatgaac acgatttaag caccaaagag
    21721 attttcgtga cttatgtgct gaaaaacaaa ctgttatggt acattgccat tgcgaatgtc
    21781 ttcgtttact taatccgcta tggcgtattg aaatggtcgc cggtgtactt aggcgaagta
    21841 aaacacttca acattaaagg tacagcatgg gcatatacca tttatgaatt agctgcgatt
    21901 ccaggtacat tactctgtgg ttgggtctct gacaaactgt tcaaaggcaa acgtggttta
    21961 accggtttca tctttatgat tcttaccacc gcagcagtgg ttgcgttctg gctcaaccct
    22021 gcgacaccgg aatctgaaat tgcacaatat gcaggccatg cttggtatga aaacccatat
    22081 caattaatgg acttcatttg gatgaccact atcggtttct taatctacgg cccggtaatg
    22141 ttgattggct tacacgccct tgaacttgca ccgaaaaaag cagcaggtac agcagcaggt
    22201 ttcaccggtt tattcggtta cttaggtggt acagtggcag cctctgcagt agttggctgg
    22261 gcagcagata aatttggctg ggacggcggt ttctacgtga tgatcggtgg tggtgtatta
    22321 gccattctct taaccttcat tgtgatggtt gaagaaggca agcacaaagc aaaattagaa
    22381 gatcactatg gtaaataata aataacttat caaaaggaag gacatttttg ttcttccttt
    22441 tatttttaca ttatatgagg taattctatg aaatttaaat tcaaaacatt ggttgctgca
    22501 ttagcattgt ccgcgacagc attgggtgcc tatgcacaac aatctgataa attagtgatt
    22561 gcccaccgtg gtgcaagcgg ttatttacct gagcatacgc ttgaatctaa agctctagca
    22621 ttcgggcaac aagcggacta tttagagcaa gatcttgcta tgaccaaaga taaccgcctg
    22681 attgtgattc acgaccactt tttagacggt ttaactgatg tggcgaaaaa attccctgag
    22741 cgtaaacgag cagacggtcg ttattatgtg gtggatttca cccttgatga gattaaaacc
    22801 cttgaaatga ccgagaattt tgaggtgaaa gacggcaagc aggcacaagt ttacccgaac
    22861 cgcttcccga tgtggcagtc ccatttcacc attcacactt tggaagaaga gctggaattt
    22921 attcaaggat tagagaaatc aaccggcaaa aaaattggga tctatcctga aattaaagcc
    22981 ccttggttgc accataaaga gggtaaagac attgcactcg aaaccctgaa agtgttgaaa
    23041 aaatatggct acgacagcaa aacctcacca atttacctgc aaaccttcga tttcaacgag
    23101 ctgaaacgga tcaaaaccga attactaccg aaactgggta tggacgtaaa attggtgcag
    23161 ttagttgcct acaccgattg gcacgaaacc gaagagaaag ataaaaacgg caactgggtt
    23221 aattacgact acgactggat gttcaaagac ggtgcgatgg cagaagtggc aaaatatgcc
    23281 gatggtgtcg gcccgggctg gtatatgttg gtggataaag aaaaatctaa agtcggcaac
    23341 attgtttaca cgccattagt gaaagagttg gcgaagtaca aaatggaact tcacccatac
    23401 accgtgcgca aagatgctct gccggacttt ttccaaaatg tcgatgaaat gtacgatgcc
    23461 ctgctgaata aagcgggtgc aacaggcgtc tttactgact tccctgatac gggcgtggaa
    23521 tttttgaaaa agcagaaata gctgattttt aagtgaaaca agcggttaga tttctcaaat
    23581 tttttgcaaa aaaagaagga aattcaaccg cttttcgttt tcgctcaaaa taattttaat
    23641 cttgctcaca aattttcaaa aatccacttt ttctgctcca aatgaaagat tatagtagcc
    23701 ataggatttc attcttaaag gagtagtaaa atgttttcct ttctaaaagc ctctccacca
    23761 gcagaacaaa aagtggaagc cagcagagtt gatgcggaat atcgcaaatt acgttggcaa
    23821 gtgtttgcag gcgtctttat cggctatgcg gcatattatt taattcgtaa aaacttctcg
    23881 ttggcaatgc cgtatttgat tgatgaatat ggcttcacca aagcagactt aggtacggtg
    23941 ggcgtggcat tatcactcgc ttacggcttc agtaaattta ttatgggtaa cgtttccgac
    24001 cgttctaacc cgaaatactt tatcactatc ggcttgctcg gttcagcgat tgtgagtctg
    24061 gtgttcggtt tagtaccggg cgtgctttcg tctattccaa ttatgatcat tttggcggcg
    24121 ttaaacggct ggttccaagg aatgggctat ccgccggggg cgaaaacgat gaccaactgg
    24181 ttctcaacct ctgaacgtgg cgtgtggtgg agctggtgga acgtgtcgca caacttgggc
    24241 ggcggtttaa tcgggccgtt ggcgatttta ggcttatcta tttttggcgt gtggcaatcc
    24301 ctgttctatc tgccggcgtt gattgcgatt gtactggcgt ttgtgatgtt ctatttgatg
    24361 cgtgatacgc cggaatctca aggcttaccg ccgattgatg agtacaaagg cgagaaagtg
    24421 gtggaaaaag tggagtctgc ccacacactc tcttccaaag acattttcta caaatatatt
    24481 ttaaacaaca aattcctgtg ggcaattgcg attgccaacg tgtttgtcta tttcattcgc
    24541 tacggcatta tcgactgggc accgacttac ttaaaagaag tgaaacattt ctctgtggat
    24601 aaacagagct gggcgtactt cttgtatgaa tatgccggta tcttcggtat gcttgcaagc
    24661 ggttatttaa gcgacaaagt attcaaaggt caccgtgcgc cgccgatgtt gttattcctt
    24721 gctggtgtgt taattgcgat tgtggtgtac tggaaaaacc cagccggcaa cccgttaatc
    24781 gacaacatct gcttagtggc gattggtttc ttaatctacg ggccggtgat gatgatcggt
    24841 ttacaagcag cggatttagt gcctcgtgtt gccaccggta cagcaacagg tttaaccggt
    24901 ttattcggct acttgttagg ctctgcaagt gcaggttatg tgatgggtaa actggttgat
    24961 atgttcggct gggacggtgg tttctatgcc ctgatccttt cctgtttctt agcctttgcg
    25021 tttattgcat tgactctgtt taagaaaacc tctaaacagt tagaggttta aggctaaaat
    25081 tgacaaaaat ggaactcaag ttagagttcc attttttata gcgttggata aattaccaca
    25141 aatgatgcac acttgggcga attaagcggt tgtaaatatc ttccactttt tgcatttcat
    25201 tttcagtgag tggagggaaa ttatccaccg ctgcgttagt aattacttgt gaaaccttac
    25261 ttgctcccgg gattactgta ctcacagctt cattcatcaa tacccaacgt agggcgtaag
    25321 gaattaaatc ttccgtgccg aatagggctt tcaattcttc caccgcttgt aaaccgagtt
    25381 gataatccac acccgaaaag gtttcgcctt tatcgaaggc ttcaccattg cggttaaatg
    25441 tgcggtggtc gtctttgcca aattgggtgc aggcattata tctgcctgta agcaaaccac
    25501 ttgccaacag tacacgggcg ataataccca catttttttg ctgagcggtt gggaagagtt
    25561 gctccaatgg ttttaagcgg aacatattga agataacttc cattgccgca atgtcatact
    25621 ccattgccaa caagccttcc tctgccgttt cgatactcac accgtagtct attaattttc
    25681 cgccggcttt aagctgttcc aatttcgtaa aaatctcatc attgcgataa accaacgttg
    25741 gcgggcagtg gagcaaaatc atatccaact tttccgtgcc aagatggctt aaactaccat
    25801 caacaaattt ttcgattgcc tgtggcgtgt acatttcagc agtatgcggg tttaacgcac
    25861 gtccacattt ggtaacgaca tagaaaaagt cagggtattt tttcaaaata tcaccaatgg
    25921 ctttctcgct ttgcccgttg ttatacacat cagcggtatc aataaaattg atgccttgct
    25981 cataagcggt ttctaaaatt gccatcgcct cttgatgatt gaacggttca ccccatttcg
    26041 tcccaagctg ccaagtgcct aacccaattt ctgacaccat tttgttggtt ttaccaaatc
    26101 tgcgttgttt cattgtgata ttctcctcat tttagccaaa gcaactttca gatttttccc
    26161 aagagaatga gccgtctgta agttgcttat cgcctaactc tttatagtca aagtagctaa
    26221 attctgctgt agattcataa ctggagtaat ccactgcagc cagcccgaca aaagctcctg
    26281 tgaagaaacc gccataactg cgtaacacat aatcatctga aagcactgcc gcatctaatt
    26341 caaccggaat agtgtgccat tgtttgccat cgaatgaata ttcataacgg taagtttctt
    26401 tccgaacttt agtcttaaac caaacatact ccgttccatc aggaatgaca attgctttat
    26461 ctttaaggta agaagtatat tgcccatttc tgagtccacc tttattttct gcaacttcaa
    26521 tcacctgttg tccttgatca tttttggtga tgaaaatcca agaccagtgt gagtgattgt
    26581 aatagttagt taaacctgcc atagattgat aagaaaacgg tgtaaatttc actttggttt
    26641 ccgcatcaaa atagaaggct tgccaacggc gtgcgattag cgataaatcg tgtgtatttg
    26701 caagagagcc tcgcccaatc aattttaaaa caccattacc aacttcgccc atctctttac
    26761 taaaaggcac tcttaagtgt tccagttaat atctaacgtt gagctatcaa actcatcgtg
    26821 ttgagaatga tcaataggag cttcggtaaa aattgcatct tttggggctt ctacaaaggt
    26881 ttttccaccg tgtccaccca caatataagg ccagccgtct tgatcaaatt ctactttttg
    26941 aatggcggct tcacgcccta atgttgacca accacgagga tcggttgcgg attctgttgc
    27001 atgattccaa ggtcttgctg tgagggaagc gtaataccat tcaccacttg gggtatcaac
    27061 taatgaaccg tgcccttgtt tttgtaggta agaattaggt gtatcaaaat tagtaataaa
    27121 cggtgtattt ggagccagtt ggaaagagtg agcctccaat gttttagaac gagccactac
    27181 ttcttgatgc gtaaatactg tgccgccttc cgccgcaaac agataatatt cgccattaat
    27241 tttataaata tgtggacctt ccaccaattt cacttctgta ccttcaaaaa tcgtacgctg
    27301 ggtttcaggt ttgagtttca ttgtggcaac atcaaattcc gttaacgtaa taccgtcaaa
    27361 ggggtgatga tattcacggt gatcccaagt ctgttgcact aaatattttc gcccatcatc
    27421 atcgtgaaac aacgaagcat caaacccaat accattcaat ttaatcggag ctgaccaagg
    27481 accttgaatt tctttggcag tagttagata gttagtcata tctttgaatg caccgtctgt
    27541 aatttttaca tcggtataaa ccaaccaaaa tttaccttcc gcataagaaa gatcaggagc
    27601 ccagatacca cctgaagagg gattgcctcg catatctaac aacgtggttg tatctaagac
    27661 atttttaact aaattccaat gcactaaatc tttcgattcg tgaattctca ctcccggaaa
    27721 ccattcaaaa gtagaagttg caatgtagta agtatcaccc acacgcacaa tagatggatc
    27781 tggattgaaa ccgggtaaaa ctggattttg aatttgcata atctattctc ctatactcaa
    27841 attatttgga ataagcagta attttttcgt tgatatgatc aatatcagta tcgcttaacg
    27901 gatagcgact catcacaaat cctgcaataa tcgctaaaat aattggagcc caaatcattg
    27961 aaagattgat accaaataaa gcctcttcgg tttgagccaa aagcgagccg ttaaaaccat
    28021 aaaccgcatt aatataaccc ggaataatac cgcctaacgc caagccgatt ttaaagaaca
    28081 agcccattaa cgcattaata atacctgcta cacgtttttt cgacttaaac tctccaaagg
    28141 taacaacctc aggcactaac gcccacataa aaccggtagc agaagttaat ccccattgtt
    28201 gtaagaaacg accgatatag cctaaggttg gagagtattt gaaggagtca aattgccata
    28261 cccatagaca aagttgccct agaacgaaaa tccctaaaaa tagatagaaa aagttctttt
    28321 taccgatagt gcgacgtagt ttcggccata agaatacaag gaaaatccca gggatagagc
    28381 ctaataaacc gacggaggca atccactcag aatgcccaat attatatttt aggtaaaaag
    28441 gccacaccgt atttccgaag aacataaaag taaaacctat taagaagaat aaccctaaaa
    28501 tctgtaatgg acgattgcgt ttgagttcat taactaaatc tgaatacttg actttatctg
    28561 tttcttccgc tgttggaata atccgctctt tagtaccaaa ataagagagc attaacgcca
    28621 caaatccaat taccatatag accgcataaa ccttaaacca agcagggcct gcagcagcag
    28681 acatataatc acctaaatag agctcaatac cgaaaaagcc ggtgtttttt aattcggcat
    28741 gtggtgcaag taactgcaca aaaagtggga ataaggtata aacaaacaaa ttagcgatat
    28801 ttgccattgt catacgggtt gtggttaatt tagcaatttc gtctgtgtct cgagtaagag
    28861 aagcagaaag cgagccataa ggaatattaa caaaagaata aaccatcgca gtggcaaaat
    28921 aagaaaggaa agcataaatc actgagccac gtactgattc aagaggaaga aatagtagtg
    28981 aagctaaaac cacaagagga atcccaaatt tcagtaaata cgggcggtat ttaccctgtg
    29041 ctgagggctt gcttttgtca ataaaggcac cgacaaacgg atcccaaaac acatttcccc
    29101 attttacaat taagaaaatc gttgctcctg ctacggcaga aatgccgttt acagtagtta
    29161 agtaagtgag taagaaacca ccaactgtac caaaaactaa attttgggct aagtcgccac
    29221 taccataagc aatacgttca aacgtactga gtttagcaaa ctcatctgcc ttatttgtta
    29281 ccctgttcat tacgaacctc ctcgttatat aattaagttc gcttattttc aggtaaagaa
    29341 ataagggctt caattacgaa tattttttac tacattatgt ttttttgttt ttgtgaagca
    29401 catcacaaaa tagaaataaa tcagatgaaa taataggtta taaaaaaagc acaccttatt
    29461 aaccaggtat gctttatgaa aaatagttaa cacaagcagg cagatttgca aaaaaattta
    29521 caaattcgac cgcttgtatc attaaacttc caatgtatta gggctttttc aacactacta
    29581 aatgccgttc tcctaccaac tcaggtactt caagcttaat cacttccact agctgaatcg
    29641 gttgtttgat ttcaattatt tcctgctcat catacacgcc ttttaatgca taaaatttac
    29701 cgttttcagt cggtaaatga taacaccagt cgatcatatc attaagcgag gcaaaggctc
    29761 ggcttaatac gccgtcaaac tggctttcag tgtattcctc cactcgactt tgcactgggg
    29821 taacgttttt aataccaagc tcacgcaacg catttttgat aaaagtgatg cgtttgccta
    29881 agctgtctag tagcacgaac tgtttatcag ggttagcaat cgccagcgga atgcccggta
    29941 gccccggccc cgtgccgaca tcaataaacg tttcgccttg taaatgacga ctaacaacaa
    30001 ggctgtccaa aatatgttta accaacattt catcagggtt gcgaacggaa gtgaggttat
    30061 acgccttatt ccatttatcc aataatctca caaaaccaac taactgctct ttttgttgat
    30121 cggtcaaatt tatttcggct tgagcaagca agcggtttaa tttagctaac attttgcaaa
    30181 ttccttaatc attattttca ttaatacgca atgcccgatt acttaacgaa tgactttttt
    30241 caaacaataa attttcaaga aacatcacta aatacgcttt agtcacaaat acaccttgtc
    30301 gcagattttc ataattggta tgaacaagtg cattgcagaa ataccacgaa ggttgggcaa
    30361 acatttggtg atcgaacggc gaaaaaccga gtttacgcag atatatcatt aaaaatacgg
    30421 cggtagttcg ggtatttcct tctccaaaga atacaagcgg tcaattttgc aaaaatttct
    30481 gcaaaaccaa ccgcttgtag tatttacagc tcaccccgtt tcaacattcc ttgcttcttc
    30541 aaattcacca acagaatgga aatcgctgcc ggtgtgatgc cggaaatgcg gcttgcctgc
    30601 ccgatagaga cagggcggtg ttgcatcaat ttagctcgca cttcgttgga gaggctttcg
    30661 actttgtcgt agtcaaactc taccggaatc agggtgtttt cgtggcgttt atggcgttcg
    30721 atttcgttgt attgatgctc aatatagccc tgatatttga tcgcaatttc cacctgttct
    30781 gccacttgct tgtcttcaat agcaggggca aatagggcga tttgggtcag cttttcgtaa
    30841 ctcatttcag gacggcggat taagtcttca ccgcttgctt cacgggctaa aggattagcc
    30901 aataacgcgt tcaattcgtc cagatttggc atttgcaaat gtgcccaagt ggatttcaaa
    30961 cgagctcttt cttgctcaat cgcttccatt ttttggttga aacgcaccca acgtgcctcg
    31021 tcaattaatc ctagttcgtg ggcttttggt gttaaacgaa tgtccgcatt gtcttcacgc
    31081 agcaacagac ggtattcggc acgagaggta aacacacggt atggctcttt ggtgcctaat
    31141 gtacagaggt cgtccaccaa cacgccggtg taggcttgat cacgggttgg ataccacgcc
    31201 tctttacctt gaacctgtaa cgctgcgtta atccctgcca gcaaaccttg cgcacctgcc
    31261 tcttcgtaac cggtcgtgcc gttaatttgt ccggcaaaga ataaaccgtc aatcgctttg
    31321 gtttcaaggg ttggttttaa atcacgcggg tcgaagtagt cgtactcaat cgcatagccc
    31381 ggtttgatga tgcgggtgtt ttccaagcct ttcattgagt tgacgatccc catttgcaca
    31441 tcaaacggca agctggtgga gatcccgttc gggtaaacct caatcgtatt taagccttcc
    31501 ggttcaaggt agatctggtg gctattacga tcggcaaaac gcattacttt atcttcaata
    31561 gacgggcagt aacgtggacc aaccccttcg ataataccgg tgtacatcgg gctgcgatca
    31621 agactgttgc gaattaaatc gtgggtttga tcgttagtgt gggtgatgta gcacggaatt
    31681 tggcgtgggt gctgtgagac atcgcccata aaagagaaga caggtaacac ctcatcgccg
    31741 tgctgtttgg caagtacgtc aaagttgatg gtacgggcat cgaggcgagg tggtgtacct
    31801 gttttaaggc gatcaacacg caaattcaga tcacgcagac gatctgccaa cattgttgca
    31861 gcaggatcgc cggcacgacc acctgcatag ttatccaacc caatgtggat cttacccgct
    31921 aagaacgtac cagcggttaa aactaccgca cgggctttaa acgttaagcc cattttggta
    31981 actgcaccca ctgcacggtt gttttccacc aaaatatcca ctacttcttg ctggaaaata
    32041 tctaaatttg gttgattttc taacgcagtg cgtaccgcat tacggtaaag cacacggtca
    32101 gcttgggcac gggtggcacg caccgcaggc ccttttgagt tgtttagggt acggaattgg
    32161 atcccggcaa cgtctgttgc ttttgccatt aaaccgccca tcgcatcgat ctctttaacc
    32221 agatggcctt tgccgatccc tccgatagcc gggttgcacg acatttgccc taaggtatca
    32281 acattgtggg ttaaaatcag ggtttttaag cccattcgtg ccggtgctag ggccgcttct
    32341 gtgccggcgt gaccaccgcc gaccacgatc acatcgtaaa tttggttgta aatcatatct
    32401 cttctactat cttacaaatt ctgctgaaaa atgaacgcat attttagcgt aaaaagggat
    32461 catctgggaa atagattttt agagaggtta agatctaa
//
LOCUS       DANLXD010000015        31569 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.015, whole genome shotgun sequence.
ACCESSION   DANLXD010000015 DANLXD010000000
VERSION     DANLXD010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 31569)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31569)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31569
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.015"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(313..495)
                     /locus_tag="PXD18_000553"
     CDS             complement(313..495)
                     /locus_tag="PXD18_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301014.1"
                     /translation="MYQFGYLRTKIGTDTQRAMLWNCPTYVLIIPFLLNTSVKKQYHA
                     FWQKYHQHNNDVSFPY"
     gene            645..1685
                     /gene="selD"
                     /locus_tag="PXD18_000554"
     CDS             645..1685
                     /gene="selD"
                     /locus_tag="PXD18_000554"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020909986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:690..692,aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HDL6301015.1"
                     /translation="MSEPIKLTQFSHGAGUGCKISPKVLGTILQTQLEQFVDPNLLVG
                     NETADDAAVYDLGNGQAIISTTDFFMPIVDAPFDFGRIAAANAISDIYAMGGKPIMAI
                     AILGFPVNKLPAEVAQQIVEGGRFACQQAGIALAGGHSIDSPDPIFGLAVTGIVPTER
                     VKRNASAVAGCELFLTKPLGIGILTTAEKKGLLKPEHQHLASEVMCQINLIGSAFSEL
                     PEVTAMTDVTGFGLLGHLSEVCQGSGLRAEVDFEDIQVLDGTKEYIALGAVPGGTNRN
                     FDSYGHLISAMTDEQKAILCDPQTSGGLLVAVLPQAVEKVQQIANRANVPLFHVGRLL
                     EMEQGKPRIEVI"
     gene            1685..2158
                     /locus_tag="PXD18_000555"
     CDS             1685..2158
                     /locus_tag="PXD18_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HDL6301016.1"
                     /translation="MFKPNVTMACVVHCKGKFLFVEEIEYGKRTLNQPAGHLEKDETL
                     LEGASRELFEETGIRAEMANLVKIYQWQAPRSQTDFLRFLFSVELEEWLEPNPQDADI
                     TQALWLTLAEFEDYIQQQGQCARSPLVVQSVKDYLSGERYPLSLLNAFEWARNGK"
     gene            2148..3356
                     /gene="ubiH"
                     /locus_tag="PXD18_000556"
                     /gene_synonym="visB"
     CDS             2148..3356
                     /gene="ubiH"
                     /locus_tag="PXD18_000556"
                     /gene_synonym="visB"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HDL6301017.1"
                     /translation="MENKTTTQFDVVIVGGAVTGSVLALALSSFTHHKISIAIVEKSL
                     PDYEQQGGFDARSIALAEGSLQKMGQIRPLAGSSLGEMISEIGTPIQQIQVADKGHFG
                     KTTLKASEQNVAQLGMVVELAKFGRKLTACLAQQANITLFCPNQVVGIERSQQHCGLS
                     LKNGEKLSCSLLVAADGIQSQIAKQCGVETVKVRDYAQSAIIANVELSESHQNQAFEY
                     FTPQGPFALLPLSGNMMSLVWCVKEPNELIQLSDSEFLARLQQQFGWKLGQFVRVSKR
                     FVYPLILQKAQSHIHHRLAVVGNAAQMLHPVAGQGFNLGLRDLTTLAELVALAFNQGK
                     DIGEFSLLSTFENERTQDQARMINATSGLISLFCCEMLPVQVVRNLGLLTVSHSKIAR
                     DFVANQALGW"
     gene            3619..4851
                     /locus_tag="PXD18_000557"
     CDS             3619..4851
                     /locus_tag="PXD18_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
                     /protein_id="HDL6301018.1"
                     /translation="MTTENMSTPKQAFIGLQMLFVAFGALVLVPLITGLDPNVALLTA
                     GVGTLIFQICTKRQVPVFLASSFAFIAPIQFGVQQWGIPVTMGALLCSGFIYMALSAL
                     VKAKGVNILHKYFPPIVIGPVIMVIGLGLAPVAVDMATGKSANIAYNTAIIVSMITLV
                     TTLIVAVFAKGLLKLVPILAGLTVGYILSVFMGLVDFTKVVEAPWFSLPKVSAPEFKL
                     DAILYLLPIALAPAVEHLGDVMAISQVAGKDFMKKPGLHRTLLGDGLATSAAAALGGP
                     PNTTYSEVTGAVMLTKNFNPKIMTWAACWAIAFSFCGKIGAFLATIPTFVMGGIMMLL
                     FGAVAVVGINTLIKAKVDLSIPRNLCIASVVMTFGIGGMLINIGEFSLKGISLCALVA
                     IVLNIVLPKEKVEDSAAH"
     gene            4918..5904
                     /locus_tag="PXD18_000558"
     CDS             4918..5904
                     /locus_tag="PXD18_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HDL6301019.1"
                     /translation="MQKLTFSPPLLNTPCPWCSELESLRELYACEYTGAVTTRTSMPQ
                     PYPHDWAKNQYVLFDSNAQKTASVNTQDATSLQTASLNTIGLSPNNLDTTISFVRTIS
                     NELTAPSSKPFIISVFGSPEEVGECYEKIVAFQTEVKMPLAMEINISCPNIPGEISPA
                     YSAEELSHYLHALQTSLKKLAQGDNTLPIGIKIPPFTYQNQYDELIKGLLQAVENGEN
                     LPISFITSTNTLGSSLVLNAGKAVLNSEVGTGVGGMAGTAIHALSLGNVYTIRQMLDQ
                     EPKLKHLQIIGVGGVNDKAGFERMKSVGADFVGLATALGVKGIGVFKEILSE"
     gene            complement(5945..6355)
                     /locus_tag="PXD18_000559"
     CDS             complement(5945..6355)
                     /locus_tag="PXD18_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005625316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HDL6301020.1"
                     /translation="MLYSVLTAHILLNEPYRNGAHSTQHEHLVVMFEIDEESGYFYAM
                     DLHQTEQPVVDSLFVFRVSDIEQNSLKEPRRLEICWSEDGYQAFLLINGYPHAVFDFR
                     QFVGYNHTKFPMPELGSMWVHKETTNELVEKWLG"
     gene            complement(6421..7731)
                     /gene="eno"
                     /locus_tag="PXD18_000560"
     CDS             complement(6421..7731)
                     /gene="eno"
                     /locus_tag="PXD18_000560"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HDL6301021.1"
                     /translation="MAKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTG
                     SREALELRDGDKGRFLGKGVLKAVSAVNNEIANALVGKDGSAQAEIDQIMIDLDGTEN
                     KSKFGANAILAVSLATAKAAAASKGLPLYAYIAELNGTPGVYSMPLPMMNIINGGEHA
                     DNNVDIQEFMIQPVGASTLKEALRIGAEVFHNLAKVLKAKGLNTAVGDEGGFAPNLAS
                     NADALACIKEAVEKAGYVLGKDVTLAMDCASSEFYDKERNVYDMKGEGKTFTSQEFTH
                     YLEGLCKEYPIVSIEDGQDESDWEGFAYQTKVLGDKVQLVGDDLFVTNTKILKNGIEK
                     GIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQ
                     IKTGSMSRSDRVAKYNQLIRIEEALERAGTPAPFNGRKEIKGQA"
     gene            complement(7922..9100)
                     /gene="rlmC"
                     /locus_tag="PXD18_000561"
     CDS             complement(7922..9100)
                     /gene="rlmC"
                     /locus_tag="PXD18_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(747)-C(5))-methyltransferase
                     RlmC"
                     /protein_id="HDL6301022.1"
                     /translation="MSSLLHCSHFERGDCTSCQWIEKPYSTQLAAKEADLKRLILPFI
                     LQNKTEILPLVGSPISQFRNKAKMVVSGSVERPILGILKDQNDAQSGVDLTDCLLYPS
                     SFHRLFPILKDFIARAGLVPYNISKKKGELKYILITESQYNQSFMLRFVVRSEAKRAL
                     VERELPELLEKLPPNSVVSLNIQPQHAALLEGETEIFLTEQKVLEEHFNGIPLFIRPQ
                     GFFQTNPVVASQLYHTAQSWIEHLPIAKLWDLFCGVGGFGLHCANALQAKNSNVELTG
                     IEISASAIASATKSAEKLGLKQVKFASLDSAQFALNEAGSPPDLVIVNPPRRGIGKLL
                     AEFLNQLGSPYLIYSSCNAVSMANDFTFLTNYELHKVQLFDMFAHTAHYETLTFLVKK
                     "
     gene            complement(9093..10130)
                     /gene="nagZ"
                     /locus_tag="PXD18_000562"
     CDS             complement(9093..10130)
                     /gene="nagZ"
                     /locus_tag="PXD18_000562"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HDL6301023.1"
                     /translation="MLLIDIKDKELTQEEVEMLEHPLVSGLILFTRNFYDKAQIQALV
                     KSIRQRVKKPLLITVDQEGGRVQRFREGFTKLPAMQSFNQLATTPEQAMQLAKETGWL
                     MAAEMFALDIDLSFAPVLDLGHECKAIGDRSFGQEPAAILPVAEAFIDGMREIGMATT
                     GKHFPGHGHVLADSHLETPFDDRPKERIFNHDILPFKQLIAKGKLSAIMPAHVVYTQC
                     DSQPASGSSYWLKEVLRKQLNFNGVIFSDDLGMKGAGFMGNFVERSEKAIQAGCDLLL
                     LCNEPEGLVQVLDGLKYQPTQAQKERRLSLMKRKTVTWRELENSSRYQQTQAELTALQ
                     NNWLEWKEANV"
     gene            complement(10256..10987)
                     /locus_tag="PXD18_000563"
     CDS             complement(10256..10987)
                     /locus_tag="PXD18_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDL6301024.1"
                     /translation="MFDWITNPEAWVALFTLTGLEIVLGIDNIIVISILVSRLPIEQR
                     QSARIIGLGLAMGTRILLLLSLAWMMRLVEPLFTIGNNPISGRDLILLIGGLFLIVKS
                     AMELKESISAESHEEKSESIKKASFFMVLIQIAIFDIIFSLDSVITAVAMADDIPVMV
                     IAIIIAVAVMMLAAKTIGDFVDNNPTIKNLALAFLILIGIVLVGEGFDIHIPKAAVYT
                     AMGFSVVVEMLNIKMRRNQAKLEQA"
     gene            complement(11076..11756)
                     /gene="mutH"
                     /locus_tag="PXD18_000564"
     CDS             complement(11076..11756)
                     /gene="mutH"
                     /locus_tag="PXD18_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutH"
                     /protein_id="HDL6301025.1"
                     /translation="MQLSTFSPTEQALLSKAEWLAGFTLGEIAEMLHIPIPADLKRDK
                     GWVGTLIETALGAKAGSKAEQDFAHLGIELKTIPVNQKGLPLETTFVSLAPLTQNNGI
                     IWETSHVKHKLSRVLWIPVEGERKIPLAERHIGQPILWSPTITQESRLQQDWEELMEL
                     IVLGELHKINATLGEVLQLRPKGRNNRSITSAINAKGEIVQSLPLGFYLRKHFTAEIL
                     QNFLHCPL"
     gene            complement(11848..12483)
                     /gene="lexA"
                     /locus_tag="PXD18_000565"
     CDS             complement(11848..12483)
                     /gene="lexA"
                     /locus_tag="PXD18_000565"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="repressor LexA"
                     /protein_id="HDL6301026.1"
                     /translation="MRKHLTARQQEIFDFVKNHIETTGMPPTRVEIAREIGFKSPNAA
                     EEHLKALARKGYIEMLSGTSRGIRILVEDENQAANDEDEGLPLIGKVAAGTPILAVEH
                     VENHYPVNGAMFNPSADYLLKVNGNSMEKIGILDGDLLAVHKTNTARNGQVVVARVND
                     EVTVKRLEKKGELIYLHPENDELKPIVVNPAQEYIEIEGIAVGVIRSNAWM"
     gene            12650..15085
                     /gene="plsB"
                     /locus_tag="PXD18_000566"
     CDS             12650..15085
                     /gene="plsB"
                     /locus_tag="PXD18_000566"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsB"
                     /protein_id="HDL6301027.1"
                     /translation="MSGLLNFYRAFLNLPLSLLVKSRSIPTHPVAELELNLEQPIVYV
                     LPYTSQTDLLILQKNCLALNLPDPLQENVIEGQTLLRFVFLDEGRRFFKSKGAKSETE
                     SIFYRYLDLHRANAELDVQLVPVSVLWGRAPGKEDARHLQVLTSFQRFLSMVWFGRDN
                     FVRFSPAVSLRYMVTEYGADEKIAQKIARVAKMHFAKLRYSAMGPRLPNRDAMFNKIL
                     NSEVIQAAIAEEAKKSSPEKARKEAEKIINEIAADVKHESLRVADRVLSWLWNKLYQG
                     INVQNADRVRKLALEGHEIVYVPCHRSHMDYLLLSYLLYHQGLVPPHIAAGINLNFWP
                     AGPIFRSWGAFFIRRTFKGNRLYSTIFREYLAELFYRGYSVEYFIEGGRSRTGRLLEP
                     KTGMMSMSLQALQRGLNRSLSIVPVYIGYEHVLEVDTYAKELRGAAKEKENAGLVLRV
                     LKKLKNLGQGYVNFGEPILVNNYLNQYFPEWKEPSEDGRPKWLNEAVDNISHQVMVNI
                     NKAAAVNAKNLVGSALLASRQRALTREQLIEQLGSYIQLFRNVPYSKDMTLPTESAEV
                     MLNHVIHLPRSGVLIEKDNFGELVRLERESAVLMTYYRNNVQHLFVLPSLVASMVLHH
                     EAVSKDVVIKSVNRIYPFLQAELFLHFKQEELKAHIEAIIAELSRQEVIKNESDMLMI
                     NRSHIRTLQLHSAGVREILQRYYISLSVLLEQPNISRGYLEKESSSIAQRLSVLHGIN
                     APEFFDKAIFSTFTSSLKAQGYFDGDDNLAIAKVKETESLLRSLISIEVQQTIQGAMA
                     KVAESVENPNIAG"
     gene            complement(15190..15753)
                     /locus_tag="PXD18_000567"
     CDS             complement(15190..15753)
                     /locus_tag="PXD18_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate uptake transporter"
                     /protein_id="HDL6301028.1"
                     /translation="MSAPNSGTNPAPLGLCGFALTTFLLSLINNGTFSGENVGLVLAM
                     GFAFGGTSQMIAGMFEFAKGNTFGFTAFTSYGAFWWSFALFKVFFAANVSAEFVGWYL
                     VAWGTFTLMMFIGTLAKARALQAIFLSLTITFYLLAAGDFTHNTTLTNIGGNFGLLTA
                     FLAFYLAAADIINESFGKTVLPIGEPK"
     gene            complement(15951..16847)
                     /locus_tag="PXD18_000568"
     CDS             complement(15951..16847)
                     /locus_tag="PXD18_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6301029.1"
                     /translation="MDILDRLLAFAQISAGISVKCQLQGDWQLENPHQTGQAIAHIIS
                     YGQAYLQHNGKTHHLKQGDIVFFPRFADHTLRSQIQPLTSKNAVNPEQLGAFTLTQAG
                     LSQSECDMFCLHFYYDHQAELMESLPEMIVFQVAETPLKAMLDILKQEAETPNLAVKS
                     VVNSLAVVILTMILREHLVNHNNQLFGILKGWQDLHLRPLIKAILLNPEHEWQVDDMA
                     AFIHLSRAQLVRLFNKHLCISPHAFVHKIRLQKAAMLLKSQAGSVLSIALSCGFQSES
                     HFITAFKKQYCVTPSQYRQLNP"
     gene            16983..17324
                     /locus_tag="PXD18_000569"
     CDS             16983..17324
                     /locus_tag="PXD18_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDL6301030.1"
                     /translation="MSSFQNWTEHTAHVKQSFGKLGQKHPKMLEAYKALGTAAAAEAL
                     DHKTRELIALAVAITTRCESCISVHAEEAAKAGATESEIAGALATAIALNAGAAYTYA
                     LRALEAVEEQK"
     gene            17335..17688
                     /locus_tag="PXD18_000570"
     CDS             17335..17688
                     /locus_tag="PXD18_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDL6301031.1"
                     /translation="MKKLAWILGFAAMMPMMSSAKQASVQQVQAEKAAGIWIDVRSAE
                     EFQQGHLNGAINVTHTEIAQRIAEVAPDKNQPIHLYCRSGHRAEAALNELKKLGYSNV
                     TNHGGYDDLIKAGLK"
     gene            17748..18386
                     /locus_tag="PXD18_000571"
     CDS             17748..18386
                     /locus_tag="PXD18_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005719747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgB family protein"
                     /protein_id="HDL6301032.1"
                     /translation="MSAFNNFVNFVANIVAPMQRQFINFVRIAICIVMVWIGGLKVCQ
                     YEADGIAHFVSNSPFFSYMYKKGPNLVDDGTGKMVMEYTLHKNPEGKMVAKNIEWHKE
                     NGTYTASYIIGATIVTVGLLTLSGIWFPVSGMAGGLLTFGMSIVTLSFMITTPEIWVP
                     NLGGDMPTPAHGFPYLSAVGRLIVKDVIMMAGGLVAAAECANRILARRKAIA"
     gene            18521..19702
                     /gene="purT"
                     /locus_tag="PXD18_000572"
     CDS             18521..19702
                     /gene="purT"
                     /locus_tag="PXD18_000572"
                     /EC_number="2.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent phosphoribosylglycinamide
                     formyltransferase"
                     /protein_id="HDL6301033.1"
                     /translation="MTTIGTPLRTNATKVMMLGSGELGKEVVIELQRLGVEVIAVDRY
                     DNAPAQQVAHRAYTISMLDGNALRDLVEKEKPDFIVPEVEAIATATLVELEQEGYNVI
                     PTAKATQLTMNREGIRRLAAEELGLKTSPYRFVDNFEQFQQAIQEIGIPCVVKPIMSS
                     SGHGQSVIKSEADIQQAWDYSQQGGRAGGGRVIVEGFIKFDYEITQLTVRHIHGTSFL
                     APIGHIQVDGDYRESWQPQQMSDIALKKAQETAEKITSALGGRGIFGVELFVCGDEII
                     FNEVSPRPHDTGIVTMASQELSQFALHARAILGLPIPEIYRISPAASKAIVVEGKSDN
                     VRFGGVDKVLAEIGTNIRLFGKGEVNGHRRLGVILARDENTVRALEKARRAYDKLDIQ
                     L"
     gene            complement(19794..21287)
                     /locus_tag="PXD18_000573"
     CDS             complement(19794..21287)
                     /locus_tag="PXD18_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005556599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDL6301034.1"
                     /translation="MFKQLQQVGKAFMLPIAILPAAGLLLGIGGALSNKATVQAYPIL
                     DNPTLQGIFQIMASAGSVVFGNLALLLCIGLGIGLAKRDKGVAALAAVVGYLIMTGTI
                     SALIPLFPPETKGIDTGVIGSLVMGLITVKLHNKYHNIQLPQILGFFGGSRFVPIVTA
                     FAAIFVGAVFFLIWPAFQQWLVSAGQGIAEMGEIGTFFYGFLMRLSGAVGLHHMIYPL
                     FWYTELGGTEVVNGETIIGAQKIFFAQLADPTHQGLFTEGTRFFAGRFDTMMFGLPAA
                     CLAMYHAVPKARRGAISGLFLGAALTSFITGITEPIEFMFLFVAPWLYVFHAFLDGVS
                     FYIADLLNISIGNTFSGGVIDFTLFGILQGNENTNWLRVIIVGLPWAALYYFSFLFLI
                     KKFNVMTPGRAEESEEVVEQQTSSLTENAHKIIAALGSANNIENVDACITRLRVAVKE
                     VKAVDKATLKKLGAIDVLEVGGGVQAVFGAKAVLYKSEVNQILGKED"
     gene            21488..23335
                     /gene="ilvD"
                     /locus_tag="PXD18_000574"
     CDS             21488..23335
                     /gene="ilvD"
                     /locus_tag="PXD18_000574"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012055207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HDL6301035.1"
                     /translation="MPILRSATSTQGRNMAGARALWRATGMKENDFGKPIIAVVNSFT
                     QFVPGHVHLKDMGQLVAAEIEKAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRDLIAD
                     SVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPTIFVSGGPMEAGKTKLSDQLI
                     RLDLVDAMIESADPNVSDERIDAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGN
                     GSMLATHADRKELFLRAGREIVELCRKYYQQDDESVLPRSIATFDAFENAMSLDIAMG
                     GSSNTVLHLLATAQEAGVDFKMEDIDRLSRVVPCLSKIAPNTNKYHMEDVHRAGGIMG
                     LLGELDRAGLIHRHVKTVLGLTIEEQLNQYDIIRNKDEDLHKFFRAGPAGIRTTKAFS
                     QDCRWDTVDDDRVNGCIRNVENAVTKEGGLAVLFGNIAEDGCIVKTAGVDESIWKFTG
                     TAIVFESQEDAVAGILGGKVKEGHIVIIRYEGPKGGPGMQEMLYPTSYLKSMGLGKKC
                     ALLTDGRFSGGTSGLSIGHASPEAASGGAIALINDGDTVAIDIPNRSINLMVSDEELA
                     ARRAEMEARGDKAWQPLKREREVSFALKVFGHFATSADKGAVRDKSLLK"
     gene            complement(23469..23819)
                     /locus_tag="PXD18_000575"
     CDS             complement(23469..23819)
                     /locus_tag="PXD18_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TusE/DsrC/DsvC family sulfur relay protein"
                     /protein_id="HDL6301036.1"
                     /translation="MWHFYLMTIELNNIQYPTDASGYLTNLNDWSVELAEKIAEKEQI
                     SLTAEHWEIIYLVRDFYQEYKTSPAIRMLVKTMAQKFGEEKGNSRYLQRLFPDGPAKQ
                     ATKIAGLPKPAKCL"
     gene            complement(23848..24513)
                     /locus_tag="PXD18_000576"
     CDS             complement(23848..24513)
                     /locus_tag="PXD18_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BAX inhibitor protein"
                     /protein_id="HDL6301037.1"
                     /translation="MENRLAHSYSTGESLISTHKVLRNTYMLLAMTLTFSAVVAFVAI
                     QMNAPAMPWWGLLVGFYGLLFLTNATSNSSAGILSVFALTGFLGYTLGPILNRYIGAG
                     LGDIVALAFGATALVFFACSAYVLTTKKDMSFISGMMVALFVVLLVGIIANIFLAIPA
                     LSLALSSLFVIFSSGAILLATSNIIHGGETNYIRATVDLYVSIYNLFVSFLQIFGVLG
                     SDD"
     gene            24719..25267
                     /gene="pgsA"
                     /locus_tag="PXD18_000577"
     CDS             24719..25267
                     /gene="pgsA"
                     /locus_tag="PXD18_000577"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HDL6301038.1"
                     /translation="MKLNFPTYLTLFRVGLTPLFIVAFYLPTKYAPEISTLIFFIASI
                     TDAFDGYLARKWNQTTRLGAFLDPVADKVLVAVAFVCVAEYYHTWWITIPICIMIARE
                     IIISALREWMAELGERASVAVSIWGKVKTTAQMLALGGMLWRQNQLMEILAFILLYIA
                     VGLTIWSMMQYLNASKNSLLKS"
     gene            25345..27183
                     /gene="uvrC"
                     /locus_tag="PXD18_000578"
     CDS             25345..27183
                     /gene="uvrC"
                     /locus_tag="PXD18_000578"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HDL6301039.1"
                     /translation="MSEFNAKSFLLNVPHQPGVYRMYDSKGTIIYVGKAKDLKKRLAS
                     YFRSQLSSKKTEALVANLANIETTITHSETEALLLEHNYIKENQPKYNVLLRDDKSYP
                     YILLTKHKHPRLTAFRGSKKIAGEYFGPYPNVTAVRETLNLLQKIFPIRQCEDTYYKN
                     RSRPCLQYQIGRCLAPCVEGCYSPVEYDQQVNLVRLFLQGKDHQVVEHLVQKMEDAAE
                     ALDFEGAARFRDQIQSVRAVQEKQFVSNDRLDDLDIISIVYQNGIACVHILFVRQGKV
                     LGNRSYFPKVPSNTDLTELADTFVGQFYLQMNQHRTIPNQIVIDHQLSESKALSEILS
                     EQAGHKVSILDNAIRGDKQRYLALARTNAMAALVLQLKQESHIQSRYQALKEMLKMSE
                     IKRMECFDISHTMGNQTVASCVVFDENGPLKSDYRRFNIEGITGGDDYAAMEQALLKR
                     YNRELPPEKIPDIIFIDGGKGQLNRALDVFAKLDVEWDKSKPLLIGVAKGVERKAGLE
                     TLIISKWDKEIHLPPDSLALHLIQHIRDESHQHAISGHRKKRQKAFTESGLESIAGVG
                     AKRRQALLKYLGGMQGVKSATLEEIQSVPGISKALAEVIFDTLKNS"
     gene            complement(27188..27463)
                     /locus_tag="PXD18_000579"
     CDS             complement(27188..27463)
                     /locus_tag="PXD18_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301040.1"
                     /translation="MKKLILLGLSVALTACSTPQQQSTVPMDMQAVQDYHQRVINKQT
                     VDKNTKQHDEPLNQSDKRSESINLPIHPIIYPSIGVGYHYGWKRYRY"
     gene            complement(27588..27941)
                     /gene="rplT"
                     /locus_tag="PXD18_000580"
     CDS             complement(27588..27941)
                     /gene="rplT"
                     /locus_tag="PXD18_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009635878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HDL6301041.1"
                     /translation="MARVKRGVIARARHKKVLKAAKGYYGARSRVYRVAFQAVVKAAQ
                     YAYRDRRQRKRQFRQLWIARINAAARQNGLSYSKFINGLKKASVEIDRKILADIAVFD
                     KVAFAALVEKAKSAL"
     gene            complement(28050..28247)
                     /gene="rpmI"
                     /locus_tag="PXD18_000581"
     CDS             complement(28050..28247)
                     /gene="rpmI"
                     /locus_tag="PXD18_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HDL6301042.1"
                     /translation="MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRQL
                     RHKSMVAKADQVLVVACLPYA"
     gene            complement(28511..29053)
                     /gene="infC"
                     /locus_tag="PXD18_000582"
     CDS             complement(28511..29053)
                     /gene="infC"
                     /locus_tag="PXD18_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015871208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HDL6301043.1"
                     /translation="MKPVKRVQSNRAHRLNDEIRGVKEVRLTDENGEQVGIVSLQDAL
                     NRAEEAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPG
                     TDDGDYQVKLRSIIRFLEDGDKVKITVRFRGREMAHQEIGMDVLERVKADTAEIAMVE
                     SAPGKLEGRQVVMVIAPKKK"
     gene            complement(29212..31011)
                     /gene="recQ"
                     /locus_tag="PXD18_000583"
     CDS             complement(29212..31011)
                     /gene="recQ"
                     /locus_tag="PXD18_000583"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HDL6301044.1"
                     /translation="MNTTAISVLNNIFGYQKFRDGQEEVINAVLENRDCLVIMTTGGG
                     KSLCYQVPALCLDGITLVISPLISLMKDQVDQLITNGIEAAYLNSTQTLEEQQLVEQK
                     ALSGQLKLLYLSPEKVMTQGFFHFISLCKISFIAVDEAHCVSQWGHDFRPEYTLLGGL
                     RNTFPNVPLMALTATADLTTRSDILHHLRLNSPHIYLGSFDRPNIRYTVQEKFKPLEQ
                     LIKFISKQQGKSGIVYCNSRKKVEEITEKLSARKISVMGYHAGMSFEQRERVQNAFQR
                     DDIQIVVATIAFGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDP
                     SDYAWLQKILLEEPESEQRNIKQHKLQAIGDFAESQTCRRLVLLNYFGEHRQEQCKNC
                     DICLDPPQQYDGLLDAQKVMSVIYRTGQIFGQHHIIAVLRGMNNLKIREHQHDQLSVY
                     GIGKEQSQHYWQNVVRQLIHLGLIIQNIANHSALQLTESARPFLRGEKQLQLALPRLG
                     ISATAFVQKQASHRYDKDLFARLRFLRKQIADLENIPPYIVFNDATLQEMAEFLPTSK
                     VEMLEINGVGERKFERFGQAFMSLIKEYQNNRK"
     gene            complement(31120..31425)
                     /gene="cyaY"
                     /locus_tag="PXD18_000584"
     CDS             complement(31120..31425)
                     /gene="cyaY"
                     /locus_tag="PXD18_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HDL6301045.1"
                     /translation="MNTAQFHQAVEQVWQQIEEKIYDEGLSVDTEIQGAVCTLTFDDE
                     SQVIINKQEAMLELWLASKLGGFHFKNVEGEWVTDEGRSFWQHLEEAFARHGESVSF"
BASE COUNT         9044 a         6160 c         6956 g         9409 t
ORIGIN      
        1 aggaaaaatg tgctgtggca gaacaccgat ggcaacctta cttgatggaa aacggatttg
       61 ggtggaaaag aatttaagct caaattaatc tgacagacac ggtaatttaa aacgggagac
      121 tgtcagatca agtctgatct tctacaacta agccttctca gaataaataa attttcacaa
      181 gcggtgcaac tttgcaaaaa cttcggtatt atgtagcagt tgcacaaaac cccaaattca
      241 ttaaaaccgc ttaaaaatga aatgccctaa actgattttt cagtctaggg catttattat
      301 cacatattat ggttaatagg gaaaactcac atcattgtta tgctggtgat atttttgcca
      361 aaatgcgtga tattgttttt tcaccgatgt gtttaataaa aacgggatta tcaagacata
      421 ggtcgggcaa ttccatagca ttgcacgttg tgtatccgtg ccgattttgg tgcgtaagta
      481 accaaactga tacattagac ccaatccaac cgtcacctat tctaatagca taataactaa
      541 ggtcgcatca ttaaattaaa agctcatttt ttgcaaaaaa tttcccaaat tccaccgctt
      601 gttggcgtac aataggcata attttgattt acgatggagg cagaatgtct gaaccgataa
      661 aacttacgca gttcagccac ggggcgggtt gaggctgtaa aatttcgcct aaggtgttag
      721 ggacaatttt acaaactcaa ttagaacaat ttgtcgatcc gaatttattg gtaggcaatg
      781 aaacggcgga cgatgctgcc gtctatgatt tagggaacgg gcaggccatt atcagcacca
      841 ccgatttctt tatgccgatt gtggacgccc cgtttgattt cgggcgaatt gctgctgcca
      901 atgcgattag cgatatttat gcgatgggtg gcaagccgat tatggcgatt gcgattctgg
      961 gctttccggt gaataaattg ccggctgaag tggctcaaca aattgtcgaa ggtgggcgtt
     1021 ttgcgtgcca gcaagccggt attgccttgg cgggcgggca ttcgattgat tcgcccgatc
     1081 cgattttcgg cttggctgtt accggcattg tgccgaccga acgggtgaaa cgcaatgcct
     1141 ctgcggtggc tgggtgtgag ctgtttttaa ccaagccttt ggggattggc attctaacca
     1201 cggcagagaa aaaaggtttg ttgaagcctg aacatcaaca tctggcaagc gaggtaatgt
     1261 gccaaatcaa cttgattggt tcagcgtttt ccgaactgcc tgaagtcacg gcaatgactg
     1321 atgtaaccgg ttttggctta ctcgggcatt taagcgaggt gtgtcaaggc tcgggcttac
     1381 gggcggaggt tgattttgag gatattcaag tccttgatgg cactaaggag tatattgcat
     1441 tgggagcagt tccgggtggg acaaatcgca atttcgacag ctatgggcat ttgatttcgg
     1501 caatgacgga cgagcaaaaa gcgattttgt gcgatccgca aacctctggc ggtttattag
     1561 tggcggtgct gccacaagcg gtcgaaaaag tgcaacaaat tgcaaatcgg gcaaatgtgc
     1621 cgttattcca cgttggcaga ttgctggaaa tggaacaggg caaaccacgg attgaggtaa
     1681 tttgatgttt aaaccaaatg taacaatggc ttgcgtggtg cattgtaagg gaaagtttct
     1741 gtttgtggaa gaaattgaat atggcaaacg tacccttaac cagccggcag ggcatttaga
     1801 aaaagatgaa accttgctgg agggggcaag ccgtgagctg tttgaggaaa ccggtattcg
     1861 ggcagaaatg gcaaatttgg tgaaaattta tcaatggcaa gcccctcgtt cacaaaccga
     1921 tttcttgcgt tttctgtttt cggtggaact ggaagagtgg ctggagccga atccgcaaga
     1981 tgcggatatt acccaagccc tttggcttac tttagcagaa tttgaagact acattcagca
     2041 acaagggcaa tgtgccagaa gcccgttggt ggttcaatcg gtcaaagatt atttaagcgg
     2101 tgagcgttat ccattaagtt tgttgaatgc gtttgaatgg gcgagaaatg gaaaataaaa
     2161 caacaaccca atttgatgtg gtgattgtgg gcggggcagt gaccggctcg gtgctggcat
     2221 tggcgttaag tagttttact catcacaaaa tctcgattgc gatagtggaa aaatcgctgc
     2281 cggactatga acagcaaggc ggttttgatg ctcgcagtat tgccttagcc gaaggcagtt
     2341 tgcaaaaaat ggggcaaatc agaccgcttg caggctcaag tttaggcgag atgattagcg
     2401 aaatcggcac gccgattcag caaattcaag tagcggataa agggcatttt ggtaaaacga
     2461 ccttgaaagc aagcgagcag aatgtggctc aactgggtat ggtggtggaa cttgcaaaat
     2521 tcggcagaaa attgaccgct tgtcttgcac agcaagctaa tattacgctt ttttgcccga
     2581 atcaagtggt tggcattgag cgttcccaac aacattgtgg attgagcttg aaaaatggtg
     2641 agaaactaag ctgttccttg ctggtggcgg cagatggtat tcaatctcag attgcaaaac
     2701 agtgcggtgt ggaaaccgta aaagtaaggg attatgcaca atcggcaatt atcgccaatg
     2761 tggaactgag tgaatctcac caaaatcaag cctttgaata ttttacgcct caaggccctt
     2821 ttgctttatt gcctttgagc ggaaatatga tgtcgttggt gtggtgtgtg aaagagccga
     2881 acgagttaat ccaactttca gacagtgaat ttttagcccg tttgcaacaa caatttggtt
     2941 ggaagttagg gcaatttgtt cgagtgagca agcggtttgt ttatccgctc attttgcaaa
     3001 aagcccagtc gcatattcac caccgcttag cagttgtcgg caatgccgca caaatgcttc
     3061 acccggttgc tgggcaaggt ttcaacttag gcttgcgtga tttgactacc ttagcggaat
     3121 tagtggcttt ggcgtttaat caagggaaag atataggcga attttcgctc ttatcaactt
     3181 ttgagaatga gagaacgcaa gatcaagcca gaatgataaa tgctacaagc ggtctgattt
     3241 cgcttttttg ttgcgaaatg ttaccagttc aggttgtgag gaatttaggg ttattaacgg
     3301 tttcccattc aaaaatagcc agagattttg ttgctaatca ggcattaggt tggtaaaaaa
     3361 cacaaaagca gcaattttct atttgacact gtttttaaaa aggcgtatta tccaacccgt
     3421 ttaaaaatct caccaaagcc ttgaatgcaa attcaaggct ttttcctttt tagtgaaagc
     3481 ctatgaattt tgtttgccgt aaaatcggca aaaaaatttt gcctaaaatt cgcaatcgtt
     3541 tgcgaaatag gtttatagcg ttgttttcat ctgggtaact gcaatggtta catcgcaata
     3601 catcaaagag agtaaaaaat gaccacagaa aatatgagta cgccaaagca ggcgtttatc
     3661 gggctgcaaa tgctgtttgt tgcatttggg gcgttagtat tagttccgct gattaccggt
     3721 ttagatccta atgttgccct tcttaccgcc ggtgtcggta cgttaatctt ccaaatttgt
     3781 actaaacgtc aagttcctgt tttcctcgca tcgagtttcg cttttatcgc tccaatccaa
     3841 ttcggtgttc aacaatgggg aattcccgtc acaatgggag cattgctctg ttccggtttt
     3901 atttatatgg cattatctgc tttagtgaaa gcgaaagggg tgaatattct gcataaatac
     3961 ttccctccaa tcgtgattgg accggtaatt atggtgattg gtttaggtct tgctcctgtt
     4021 gcggtggata tggcaacggg taaatcggcg aatattgcct ataacaccgc tattattgtt
     4081 tcaatgataa cgctggtaac tacgctgatt gtggcggtgt ttgcgaaagg gctattaaag
     4141 ctcgtgccaa tattagcagg tttaacggtg ggatatatct tgtctgtttt tatgggattg
     4201 gtggatttta ctaaagtggt tgaagctcct tggtttagtc taccgaaagt ttccgcaccg
     4261 gaattcaaat tagatgcaat cttgtattta ttacctatcg cacttgctcc ggcagtcgaa
     4321 cacttaggcg atgtaatggc aatcagccaa gttgccggta aagattttat gaaaaaaccg
     4381 gggttacacc gcacgctttt aggtgatggt ttagcaactt cagcagctgc ggcattaggt
     4441 ggcccaccaa atacgactta ctctgaagta accggtgcgg taatgctaac caaaaacttc
     4501 aatccgaaaa ttatgacttg ggctgcgtgc tgggctatcg ctttctcatt ctgcggaaaa
     4561 atcggggcat tccttgccac tatccctact tttgtgatgg gcggtattat gatgttgctg
     4621 ttcggtgcag ttgcggttgt ggggatcaat actctaatta aagctaaagt tgatttaagc
     4681 attccacgta atctttgtat tgcttctgta gtaatgacat tcggtattgg cggtatgtta
     4741 attaacatcg gcgaattctc attaaaaggg atcagcttgt gtgcattagt cgctattgta
     4801 cttaacattg tattaccaaa agaaaaagta gaagattctg ctgctcatta atcaaaggac
     4861 gctgtggcgt cctttttgct aataaccctc tatttgtaaa taaaaaggaa taacactatg
     4921 caaaaactca cattttcacc accactttta aatacgcctt gcccttggtg ttcggagtta
     4981 gagagcttgc gtgaacttta tgcgtgtgaa tataccggtg cggtaacaac ccgtacttca
     5041 atgcctcaac catatccaca cgattgggcg aagaaccaat atgtactctt tgattccaac
     5101 gcacagaaaa cagcaagtgt gaatactcaa gatgcaacta gcttacaaac agcaagcctt
     5161 aacaccatcg gtttaagccc aaataatctg gataccacca tcagctttgt acgcaccatt
     5221 tcaaatgagc tgacagcgcc atcaagcaaa ccatttatta tttcggtgtt tggttcaccc
     5281 gaagaggtgg gggaatgtta tgaaaaaatt gttgctttcc aaactgaagt gaaaatgcct
     5341 ttggcaatgg agattaatat ctcttgcccg aatattccgg gtgaaatttc gcctgcttat
     5401 tccgcagaag aattatcaca ttacttgcac gcactacaaa cttcgctaaa aaaactggct
     5461 caaggtgata atactttacc aatcgggatt aaaattccac cttttactta ccaaaatcaa
     5521 tatgatgaat taatcaaagg cttattacaa gcggtcgaaa atggcgaaaa tttaccaatt
     5581 tcctttatta cttcaaccaa tacgcttggc tcatcgcttg tcttaaatgc tggcaaagcg
     5641 gtattaaatt cagaagtggg aacgggcgta ggcggaatgg caggaacggc aatccatgca
     5701 ctttctttgg ggaatgttta cacgattcgc caaatgttag atcaagagcc taagctcaaa
     5761 catcttcaaa ttattggtgt gggcggcgtg aatgataaag ccggctttga gcgaatgaaa
     5821 tcggttgggg cagactttgt ggggttagct accgcattag gggtgaaagg aatcggcgtt
     5881 tttaaagaga ttctgtctga ataatgaaga ggagggcgtg cattgcacgc ccgaataaat
     5941 gaaattagcc taaccatttc tccactaatt cattagtggt ttctttatgt acccacatac
     6001 tgccaagttc cggcattggg aatttggtgt ggttgtagcc gacaaattgg cggaaatcaa
     6061 acacggcgtg cgggtagccg ttgatcagta aaaaggcttg atagccgtct tcactccagc
     6121 aaatttctaa acggcgaggt tcttttaatg aattttgctc aatatcgctg acccgaaaca
     6181 caaataaact atccactacc ggctgttcgg tttggtgtaa gtccattgca taaaagtagc
     6241 cgctttcttc atcaatttca aacatcacta ctaaatgttc gtgctgggtt gaatgagcgc
     6301 cattacggta aggttcgttc agtagaatat gagcagttaa aacagagtag agcattaaat
     6361 tatccttata agtaaaatgc caccgatttc tcagtggcat ttaaatattt aatcaggcaa
     6421 ttacgcttga cctttaatct ctttacggcc gttgaacgga gccggtgtac cagcacgctc
     6481 taacgcttct tcgatacgga ttaactggtt gtatttcgct acacggtctg aacggctcat
     6541 tgaaccggtt ttgatttgac ctgctgctgt acctactgct aaatctgcaa tggttgcatc
     6601 ttcagtttcg cctgaacggt gagagataac tgcggtgtaa cctgcatctt tcgccatttt
     6661 gattgcagct aaagtttcag ttaaagaacc gatttggttg aatttgatta agattgagtt
     6721 tgcgatacct ttctcaatac cgtttttcaa gattttggta ttggttacga ataagtcatc
     6781 accaactaat tgtactttgt cgcctaatac tttagtttgg tatgcgaaac cttcccagtc
     6841 agattcgtct tgaccatctt cgatagacac gattgggtac tctttgcata agccttctaa
     6901 gtagtgagtg aactcttgtg aagtaaaggt tttgccttcg cctttcatat cgtacacatt
     6961 gcgttctttg tcgtagaatt cagatgatgc acagtccatc gctaaagtta cgtctttacc
     7021 taacacatag cctgcttttt ctaccgcttc tttaatgcac gctaatgcgt ctgcgtttga
     7081 agccaagttt ggtgcgaaac caccttcgtc acctacagca gtatttaagc ctttcgcttt
     7141 taatactttt gcaagattgt ggaatacttc agcaccgata cgaagagctt cttttaatgt
     7201 agaagcacct accggttgaa tcataaattc ttgaatgtcc acgttgttgt cagcgtgttc
     7261 accaccattg atgatgttca tcattggtaa tggcattgag taaacacccg gtgtgccgtt
     7321 taattcagca atgtatgcgt aaagcggtaa gccttttgaa gcggctgctg cttttgctgt
     7381 tgctaaagaa accgctaaga tagcgtttgc accgaatttt gatttgtttt ctgtgccatc
     7441 taaatcgatc ataatttggt cgatttcagc ttgtgcagaa ccgtctttgc ctactaatgc
     7501 gtttgcaatt tcgttattta cggcagaaac cgcttttaat acacctttac ctaagaaacg
     7561 acctttgtcg ccatcacgta attctaatgc ttcacgtgaa ccggtagaag cacctgatgg
     7621 agcggctgct aagcctacaa aaccaccttc taagtgaact tctgcttcta cagttgggtt
     7681 accacgagag tcgatgattt cacgaccgat tactttaaca attttagcca ttgttgatgt
     7741 cctctaatat acgagttaat agaaaaaaga ataggtatat agtaaagcga ttttctgctt
     7801 ttgtcttgga aaaactgatt gagtggcaga aaatttgcca ctaatttgat ctaagactat
     7861 attcgcctga gattatagca acctttgcaa aaaacggcaa aaatttgccc gcttgtaatg
     7921 cttatttttt gactaaaaaa gtcaaggttt cataatgtgc tgtgtgagca aacatatcaa
     7981 acagctgcac tttgtgtagt tcgtaatttg tcaaaaatgt aaaatcgttc gccattgaga
     8041 cggcattaca actggagtaa atcaaataag gtgagcctaa ttgatttaaa aattctgcta
     8101 atagtttgcc gataccacgt cgaggtgggt tcacaatcac taaatcgggt ggagaaccag
     8161 cttcatttaa agcaaattgt gcagaatcta atgaggcaaa ttttacctgc tttaggccga
     8221 gtttttcagc cgatttggtc gcacttgcaa tagctgaggc tgaaatctca atgcctgtca
     8281 gctccacgtt cgagttcttc gcttgcaagg cgttggcaca atgtaagccg aaaccaccga
     8341 caccgcagaa caagtcccac aatttagcaa taggtaaatg ctcaatccag ctttgtgctg
     8401 tgtggtaaag ctggcttgct accacagggt tagtttggaa aaagccctga gggcgaataa
     8461 atagcggtat gccgttaaaa tgttcttcca gcactttttg ttcggtgagg aaaatctcag
     8521 tttcgccttc taaaagagca gcgtgttggg gctgaatatt cagactaact actgagttgg
     8581 gtggcagttt ttccaacagt tcgggcaatt cccgttcaac caatgcacgc tttgcttcac
     8641 tacgaaccac aaaacggagc ataaatgatt gattatattg gctttcggta atcagaatat
     8701 attttagctc accttttttc ttactgatgt tatacggcac taaaccagct cgagcgataa
     8761 aatctttcaa aatcggaaaa agtctatgaa atgaggacgg gtagagcaga cagtcggtta
     8821 aatccacccc gctttgagca tcattttgat cttttaaaat gcctaaaatc gggcgttcta
     8881 cactgccgga gaccaccatt ttcgctttgt tacgaaattg cgaaattggc gagccgacaa
     8941 gcggtaagat ttccgtttta ttttgcaaaa taaacggcaa aatcaaccgc ttgagatcgg
     9001 cctctttggc ggctaattgc gtgctgtatg gcttttcaat ccactggcac gaagtacagt
     9061 cgccacgctc aaaatgcgaa caatgcaaca agctagacat tcgcttcctt ccattccagc
     9121 cagttgtttt gtaaggccgt taattcagcc tgagtttgtt ggtagcgaga gctgttttcc
     9181 agctctcgcc aagtcacggt tttgcgtttc attaaagaaa ggcgacgttc tttttgtgct
     9241 tgagtcggct gatatttcag cccgtctaac acttgcacca ggccttcagg ctcgttacaa
     9301 aggagcaata aatcacagcc ggcttggatt gctttttcag aacgctcgac aaaattgccc
     9361 ataaagcccg cacctttcat tcccaaatcg tcagagaata tcacaccgtt aaagttcagc
     9421 tgtttacgca atacctcttt aagccaatag cttgaaccgc ttgccggctg gctatcacat
     9481 tgggtgtaaa cgacgtgggc aggcataatg gcagagagtt ttcctttggc aataagctgt
     9541 ttgaacggca gaatatcgtg attaaaaatc cgctctttcg ggcgatcatc aaacggggtt
     9601 tctaaatgcg aatcggctaa aacgtgtcca tgaccgggga agtgtttgcc ggtggtcgcc
     9661 ataccgattt cacgcattcc gtcaataaag gcttcggcaa caggcaaaat cgctgctggc
     9721 tcttgcccga atgagcgatc gccaatcgct ttgcattcgt gtcctaaatc cagtaccgga
     9781 gcgaaactga ggtctatatc gagggcaaac atttctgctg ccatcaacca gccggtttct
     9841 ttcgctaatt gcattgcttg ctctggcgtt gtggcaagtt ggttaaaaga ttgcattgcc
     9901 ggcagtttag taaagccttc acgaaagcgt tgcacccgac cgccttcttg gtcgacagta
     9961 ataagcaacg gttttttcac ccgctggcga atggatttca ctaatgcctg aatttgtgct
    10021 ttgtcgtaga aattacgggt gaataaaatt agcccggaaa ctaaagggtg ttccagcatt
    10081 tcgacttctt cttgagtcag ttctttatct ttaatatcaa tcagtaacat aattttcgtt
    10141 gagctatttg caaaaaaatg agcagatatg accgcttgtt gtgcctattc tacattaaaa
    10201 agcccttgat gttgatcaag ggcgaatgat taagggcata aatgagacag agcaattatg
    10261 cttgttctaa tttagcttgg ttacgacgca tttttatgtt gagcatttca accacaaccg
    10321 agaagcccat tgccgtataa accgctgctt ttggaatatg aatatcaaaa ccttcgccga
    10381 ctagtacaat accgattaaa atcaagaacg ctaaagcgag atttttaatg gttgggttgt
    10441 tatctacaaa gtccccaatg gttttcgctg ctaacatcat taccgcaact gcaatgataa
    10501 tcgcaataac cattaccgga atatcatctg ccattgccac agcagtaatg actgaatcaa
    10561 gggagaaaat aatatcaaaa attgcaattt gaattaacac cataaaaaag ctggcttttt
    10621 taatggattc gcttttttct tcgtgagatt cggcagaaat ggattctttc agctccattg
    10681 cacttttaac aatcaggaat aatccaccga tgagtagaat gagatctcta cctgaaattg
    10741 gattgttgcc aatagtgaaa agaggctcga ccaaacgcat catccaagca agcgagagaa
    10801 gcaataaaat acgggttccc attgccagcc ccaagccgat aattcgggca gattggcgtt
    10861 gttcaatagg taaacgggaa acgagaatac tgatgacgat gatgttatca atgcctaata
    10921 cgatttcaag cccggtaagt gtaaagagcg caacccaagc ttcaggattt gtgatccagt
    10981 caaacataaa aatgtccttt taaaaataag ggattaagtg atattttcta tcaaatagaa
    11041 ttaaagccga catcttatag agtgtgagga caaatttaaa gggggcaatg caaaaagttt
    11101 tgtaaaattt cggcggtaaa atgtttacgc aaatagaaac caagagggag agattgaaca
    11161 atctcccctt tagcgttgat agcagaggtg atagagcggt tatttctacc tttgggtctg
    11221 agttgtaaca cttcgcctaa ggttgcatta attttatgca gttcacctaa cacaatcaac
    11281 tccattaatt cctcccaatc ttgctgtagg cgggattctt gtgtgatagt cggagaccat
    11341 aaaatcggct gaccgatatg gcgttcggca aggggtatct ttcgttcccc ttcaaccgga
    11401 atccaaagca cacgggaaag cttatgttta acgtgggagg tttcccaaat aataccgttg
    11461 ttttgggtta aaggagcaag gctgacgaat gtggtttcca gcggtaatcc tttctgattg
    11521 accggaatgg ttttcagctc aatgcctaaa tgtgcaaaat cctgttcggc tttactgccg
    11581 gctttcgcac ctaaagcggt ttcaatcaga gtaccgaccc agcctttatc tcgtttcaga
    11641 tctgctggta tcggaatatg aagcatctcg gcaatttcac ctaaagtgaa ccctgccagc
    11701 cattccgctt tgcttaataa tgcctgctcg gttggagaga atgtagataa ttgcattgca
    11761 cttagttaat tagactaaac tggcaagcgg tcaaatttag gcagaaattt gcaaaaaatt
    11821 actaaaaaat aaccgcttgt gaggaaatta catccaagca ttactgcgaa taacgcctac
    11881 tgcaatgcct tcaatttcaa tatattcttg agcagggttt actacaatcg gttttaattc
    11941 atcgttttca gggtgtaagt aaattaattc acctttcttc tctaagcgtt taacagtcac
    12001 ttcatcattt acccgagcaa ccaccacttg cccgttacga gcggtattgg ttttatgaac
    12061 ggctaatagg tcaccgtcta aaataccgat tttttccatt gaattgccat ttactttgag
    12121 taaataatca gcacttggat taaacatcgc accattcacc gggtaatggt tttcaacgtg
    12181 ttcaaccgct aaaataggtg tgccagcagc tactttgcca atcaacggta agccttcatc
    12241 ttcatcgttg gcagcttggt tttcgtcttc gactaaaatg cgaattccac gagatgtacc
    12301 tgataacatt tcaatatagc ctttacgagc aagggctttt aagtgttctt ctgccgcatt
    12361 aggtgattta aagccgattt cacgggctat ttctactcgg gttggtggca taccggtggt
    12421 ttcaatatgg tttttgacga aatcaaaaat ttcttgctga cgggcagtta gatgtttacg
    12481 cattttaagt taatcctcac tgtctttata tacagaaaat attgatagta tatacagtat
    12541 ttttgatttt gtaactaata atttcacgaa attccataaa aatttatggt agaatggaag
    12601 aaattagagg ttagacctcc aacaataacg attctaaaag gatatttata tgtctggctt
    12661 attaaatttt tatcgagctt tcctaaactt accactttca cttttagtaa aatctcgctc
    12721 tattccgact catccggtgg ctgaactgga actaaatctt gaacagccga ttgtctatgt
    12781 tctaccttat acctcgcaaa ccgatttatt aattttacaa aaaaactgct tggctttgaa
    12841 tttgcccgat ccgttgcaag aaaatgtgat tgaagggcaa acattgcttc gttttgtatt
    12901 tttagatgaa ggtcgccgtt tttttaaatc taaaggggcg aaaagtgaga cagagtcgat
    12961 tttttatcgt tatttagatt tacatcgtgc taatgctgaa ttagacgtcc aattagtgcc
    13021 ggtttcggta ttatgggggc gggctccggg caaagaagat gcccgccatt tacaggtgct
    13081 tacctcattc caacgttttt tatccatggt ttggtttggg cgtgataatt ttgtacgttt
    13141 ctcccctgca gtatcgttac gctatatggt aactgaatat ggtgcagatg aaaaaatcgc
    13201 tcaaaaaatc gcgcgtgtgg cgaaaatgca ctttgcaaaa ttgcgttatt cagcaatggg
    13261 gcctcgttta ccaaatcgtg atgcgatgtt taataaaatc ctgaattcag aggtgattca
    13321 agctgcgatt gcggaagaag cgaagaaatc atcgcctgaa aaggctcgca aagaagccga
    13381 gaaaatcatt aatgaaattg ccgctgatgt aaaacacgag agtttgcgtg tagcagatcg
    13441 agttctgagc tggctttgga ataagcttta tcaagggatc aacgtgcaaa atgcagaccg
    13501 tgtgcgtaaa ttggcattag aaggtcacga gatcgtttat gtgccttgcc accgtagcca
    13561 tatggactat ttgctcctat cttatctact ttaccatcaa ggattagtac cgccacatat
    13621 tgccgctggg atcaatttaa atttctggcc ggcaggcccg attttccgta gttggggagc
    13681 atttttcatt cgccgtacct ttaaaggaaa tcgcctctat tccaccattt tccgtgaata
    13741 tttagcggaa ttattctatc gtggttattc ggtcgaatat tttattgaag gcgggcgttc
    13801 acgcacaggt cgtttattag agcctaaaac cggtatgatg tcgatgagcc tacaagcctt
    13861 acagcgaggg ctgaatagat ctttaagtat tgtgcctgtt tatatcggtt atgaacacgt
    13921 cttagaagtc gatacttacg ctaaagagtt gagaggtgcg gcaaaagaga aagaaaatgc
    13981 gggcttggtg ctacgagtgc tgaaaaaact gaaaaattta ggtcaaggat atgtgaattt
    14041 cggtgagcca attttggtga ataattactt aaatcaatat ttccctgagt ggaaagagcc
    14101 ttccgaagat ggacgaccta agtggttaaa tgaagccgtg gataatattt cacatcaagt
    14161 aatggtgaat atcaataaag cggcagcagt taatgcgaaa aacttagtgg ggtcagcatt
    14221 attggcatct cgccagcgtg cattaacccg tgaacaactc attgaacaac ttggaagtta
    14281 tattcagtta tttcgtaatg taccttattc taaagatatg acattaccaa ctgaaagtgc
    14341 agaagtgatg ttgaatcatg ttattcattt acctcgttcg ggcgttttaa ttgaaaaaga
    14401 taattttggt gaactggttc gtttagaacg agaatctgct gtgttaatga catattacag
    14461 aaataatgtg cagcatttat ttgtgttgcc ttcacttgtt gcaagtatgg tacttcatca
    14521 tgaggctgtt tcgaaagatg ttgtgattaa gtcggttaat cgtatttatc cattcttgca
    14581 agcagagtta ttcttacact ttaagcaaga agaattaaaa gcacatattg aagcaattat
    14641 tgcggaacta agtcggcagg aggtgattaa aaacgaaagt gatatgttaa tgatcaatcg
    14701 ctcacatatt cgtaccttgc aattacattc agctggtgtg cgtgaaatcc ttcaacgtta
    14761 ttatattagc ctaagtgtct tgttggagca gccaaatatt agtcgtggct atttagaaaa
    14821 agagagtagt tcaattgctc agcgtttatc agtcttgcat ggtattaatg cgccggagtt
    14881 ttttgataag gcgattttct ctacctttac atcaagtcta aaagcacaag ggtattttga
    14941 tggtgatgat aatttagcga ttgcaaaagt taaagaaacg gaatcgttgt tacgtagttt
    15001 gatttcgatt gaagttcaac agaccattca aggtgcgatg gctaaagtcg cagaatctgt
    15061 agagaatcct aatatcgcag gataataaat caaagaaggg cgctaacaag cgctcgtttc
    15121 ttgcaatttt gttgccaaaa ataaaagctg aatgcgcgac cacattcagc ttttttactt
    15181 cctatataat tattttggtt caccgattgg taaaacagtc ttaccaaaac tttcattaat
    15241 aatatccgca gcggctaagt agaacgctaa gaatgcggtt aataaaccga agttaccacc
    15301 aatgttagtt agggtggtgt tatgggtaaa atcacctgcg gctaaaaggt agaaagtaat
    15361 ggttaaactt aagaaaatag cttgtaatgc acgggctttt gctagtgtgc cgatgaacat
    15421 cataagtgtg aatgttcccc aagctactaa gtaccaacca acgaattctg ccgatacatt
    15481 cgcagcaaag aacactttaa ataatgcaaa agaccaccag aatgcaccat agctggtaaa
    15541 cgcagtaaag ccgaacgtgt tacctttagc aaattcaaac atacctgcaa tcatttgtga
    15601 tgtgccaccg aaagcaaatc ccattgctaa aactaaacct acgttttcac cgctgaatgt
    15661 accgttattg attaggctta gtaaaaatgt agtaagtgca aaaccgcata aaccgagcgg
    15721 agccgggtta gttcctgaat ttggagctga cattgaaaac ctctgttata ttgttacacc
    15781 ataagtgtgg taattgttta tttacgccga taaatcagac gttatgtgcc taaaatttag
    15841 ggcgataaag tatagcgatt ttgcagtaaa ttgactagaa atttccgaga caagcggtga
    15901 gatttttgca aaattttgcc aaaaaatgac cgcttgttgt tgtcatttag ctatggattt
    15961 aactgccgat attggctggg tgttacgcaa tattgctttt taaaggcggt aataaaatgc
    16021 gactcggatt ggaagccgca agataaggcg atacttaata ccgacccagc ttggcttttg
    16081 agcagcattg ctgctttttg tagcctaatt ttgtgtacaa aagcatgtgg gctaatacat
    16141 aaatgtttgt taaataagcg gactaactgg gcacgagaaa ggtggataaa tgccgccata
    16201 tcatcgactt gccattcgtg ttcgggatta agcaaaatag ctttgatcaa aggtcttaag
    16261 tgtaagtctt gccaaccttt taaaataccg aataactgat tgttatggtt aactagatgt
    16321 tctcgtaaga tcatagttaa aataacaaca gcaagcgagt taaccacaga ttttacggct
    16381 aaattaggtg tttctgcttc ttgttttaga atatctaaca ttgcttttaa tggtgtctcg
    16441 gcaacttgaa atacgatcat ttcaggtaag ctttccatta attcggcttg atggtcataa
    16501 taaaaatgga ggcagaacat atcgcattct gattgagaaa gtcctgcttg ggtgagtgta
    16561 aatgcaccca attgttcagg gtttaccgca tttttgctgg tcaaaggctg tatttgacta
    16621 cgtaatgtat gatcggcaaa tctggggaaa aatacaatat ctccctgttt aaggtgatgg
    16681 gttttcccat tatgttgtag ataagcttgc ccatagctga tgatatgagc gattgcttgt
    16741 ccggtttgat gcggattctc aagttgccaa tctccctgta actgacattt cacactgatt
    16801 ccggctgaga tttgagcgaa agctagaagc ctatctaata tatccattgt tcattcctta
    16861 tatttccacc ttaaattgcg attatttcat tataatatga gctgatttga taataaagtt
    16921 tatcagataa acgcaataat aaatgcgttt tttcatatta ttcactttag gaggaaatca
    16981 atatgtcttc attccaaaat tggacagaac acacagctca cgttaagcaa tcttttggta
    17041 aattagggca aaaacaccct aaaatgcttg aagcttataa agcattaggt acagcggccg
    17101 cagcggaagc attagatcac aaaactcgtg aattaattgc attagcagta gcgattacaa
    17161 cacgttgtga aagttgcatc agtgtacacg cagaagaagc ggcaaaagca ggtgcaaccg
    17221 aaagcgaaat tgccggtgca ttagcgactg cgattgcatt aaatgccggt gcggcatata
    17281 cctatgcttt acgtgcatta gaagcggtgg aagagcaaaa ataaggagca ataaatgaag
    17341 aaattggctt ggattttagg ctttgcagct atgatgccaa tgatgtctag tgctaaacaa
    17401 gcatcagttc agcaagtgca ggctgaaaaa gcagcgggca tttggattga tgtacgttct
    17461 gctgaagaat ttcagcaagg gcatttaaat ggtgcaatta atgtaacgca tactgaaatt
    17521 gcacaacgta tcgcagaagt tgctccagat aaaaatcagc cgattcatct ttattgccgc
    17581 tcgggtcatc gagctgaagc ggcgcttaat gagctaaaaa aattaggtta cagcaatgta
    17641 actaatcatg gtggttatga cgatctgatt aaagccgggt tgaaataact gttttgagtg
    17701 ccaagcattt gcttggcact tttcgtttat atctgaggtt aaaaattatg agtgctttta
    17761 acaattttgt taattttgtt gcaaatattg ttgctccaat gcaacgccaa ttcattaact
    17821 ttgtacgtat tgccatttgt atcgtgatgg tttggattgg tggtttaaaa gtctgccaat
    17881 atgaagcaga cggtattgcc cattttgtgt ctaatagccc gttctttagt tatatgtaca
    17941 aaaaaggccc gaatttagtt gatgacggca caggtaaaat ggtgatggaa tatacccttc
    18001 acaaaaaccc tgaaggtaaa atggtggcaa aaaacatcga atggcataaa gaaaacggca
    18061 cttatactgc atcttatatc atcggtgcaa ccattgtgac ggttggttta ttgacgttat
    18121 ccggtatttg gttcccggtt tccggtatgg cggggggctt actcaccttt ggtatgtcga
    18181 ttgttacact ctcttttatg atcaccaccc ctgaaatttg ggtgccgaat ttaggtgggg
    18241 atatgccaac cccagcgcat ggtttcccat atctgtcagc agtcggtcgt ttaattgtga
    18301 aagatgtgat tatgatggca ggcggcttgg ttgccgcagc ggaatgtgca aatcgcattt
    18361 tagccagacg taaagcgatt gcttaattga tagtggtaat gcaagcggtc attttcttgt
    18421 aaaattttgc aataaaatga ccgcttgttt tttgtcaatt tgccataatt tcaagtataa
    18481 ttcaattacg taatcgtttg cttttatgga gaggaataaa atgacaacaa tcggtacacc
    18541 gttaagaacg aacgctacaa aagtgatgat gttaggttcg ggcgagttgg ggaaagaagt
    18601 ggtaatagag ctgcaacgct taggcgtaga agtgattgcg gtggatcgtt atgacaatgc
    18661 acctgcacag caagtggctc accgtgctta tacgatttcg atgttagacg ggaatgcatt
    18721 gcgagatttg gtggagaaag aaaaaccgga ttttattgtg cccgaagtag aagccatcgc
    18781 aactgcaacc ttggttgagt tagagcaaga gggatataac gtaatcccaa cggcaaaagc
    18841 aacgcaatta acaatgaatc gagaaggcat tcgccgattg gcggcagaag agttgggctt
    18901 aaaaacgtcg ccttatcgtt ttgtggataa ttttgaacag ttccagcaag cgattcaaga
    18961 aatcggcatt ccgtgtgtgg tcaaaccgat tatgtcttct tccggacacg ggcaatcagt
    19021 aattaaatct gaagcggata ttcaacaggc ttgggattat tcgcaacagg gcggacgtgc
    19081 cggcggtggg cgtgtgattg tagagggttt tatcaaattc gattatgaaa ttacccagct
    19141 taccgttcgc catattcacg gcacgtcgtt tttagctccc atcgggcata ttcaggttga
    19201 tggcgattat cgtgaatctt ggcaaccgca gcaaatgtcg gacattgcat tgaaaaaagc
    19261 tcaagaaacc gcagaaaaaa ttacctctgc actgggcgga agagggattt tcggcgtgga
    19321 actttttgtc tgtggcgatg agattatttt taacgaagtc tccccacgtc cacacgatac
    19381 cggaatagta acaatggcat cacaagagct ttctcaattt gctctgcacg cccgtgcgat
    19441 tttgggctta ccgattccgg aaatttaccg catcagcccg gcagcttcta aagcgattgt
    19501 ggttgaaggg aaatcggata atgtgcgttt tggcggtgta gataaggtat tagccgaaat
    19561 cgggacgaat atccgcttat tcggtaaagg cgaagtaaac ggacaccgcc gattaggggt
    19621 aattcttgct cgtgatgaaa atacagtgag agcattagaa aaagctcggc gagcttatga
    19681 taagttagat attcaattat aaagtcagga ttttgatatt cgttgatagt aggcatttta
    19741 tgcctactat cctataggcc tctaatcaaa ttggatgaaa aagttgaaga ttgttaatcc
    19801 tctttgccga gaatttggtt cacttcgctc ttatacaata ctgcttttgc tccaaatacg
    19861 gcttgtacac cgccaccgac ttccagcacg tcaatcgcac cgagtttttt cagtgttgct
    19921 ttatccacgg ctttcacctc tttcactgcc acacgcagac gggtaataca agcatccaca
    19981 ttttcgatat tatttgcaga gccaagagcg gcgataattt tatgggcatt ttcagtcagt
    20041 gagctggttt gttgttcgac tacctcttca ctctcttccg cacgtcccgg tgtcattacg
    20101 ttgaattttt tgatcaggaa taggaacgag aagtagtaaa gtgccgccca cggcaagccg
    20161 actatgatca ctcgaagcca gttagtgttc tcgttgcctt gcaaaatgcc aaacagggtg
    20221 aagtcgatca cgccaccgga gaaggtgtta ccaatcgaga tgttgagtaa gtctgcaatg
    20281 tagaacgaca cgccgtctaa aaaagcgtgg aacacataga gccacggggc aacaaacagg
    20341 aacataaatt caatcggctc ggtaatgccg gtgataaaag aggtgagcgc tgcacctaag
    20401 aacagaccgc taatcgcacc acggcgggct ttcggcacag cgtgatacat cgctaaacag
    20461 gcggcaggta agccaaacat catcgtatcg aaacgtccag cgaagaaacg tgtaccttcg
    20521 gtaaataagc cttgatgggt tggatcggcg agttgggcga agaagatttt ttgcgccccg
    20581 ataatggttt caccatttac cacttctgtt ccgcccaatt cggtgtacca aaacagcggg
    20641 tagatcatat ggtgtaagcc gaccgcaccg cttaaccgca ttaagaaacc gtagaaaaag
    20701 gtgccgattt cgcccatttc cgcaatccct tgccctgctg aaaccaacca ctgttggaaa
    20761 gccggccaga tcaaaaagaa cactgccccg acaaaaatcg cagcaaaggc ggtcacaatc
    20821 ggcacaaacc gagagccgcc aaagaagccg agaatttgcg gcagctgaat gttgtggtat
    20881 ttgttatgca gtttcaccgt aatcaagccc attaccagcg agccgatcac accggtatca
    20941 atccctttgg tttcaggagg aaacagcgga atgagggcag aaatcgtgcc tgtcataatc
    21001 aaataaccga ccactgctgc cagtgccgct acgcctttat ctcgttttgc taatccaatg
    21061 cctaaaccga tacacagtaa taatgcaagg ttgccaaaca ccacactgcc tgccgatgcc
    21121 ataatctgga aaatgccctg taaagtcggg ttatccagta tcgggtaggc ttgcaccgtt
    21181 gccttattcg acaaagctcc gccaatccct aacagcaaac cggctgccgg taaaatcgca
    21241 atcggcagca taaaagcttt tccgacttgt tgcagttgtt tgaacataaa atttctcctt
    21301 ttttatggtt gtatttgatg gtttatagca tactgaaatt tagccgtatg aggtgtgata
    21361 taactcacag atttgcaaaa tttttagcaa attcgaccgc ttgtaaaaaa attaccgctt
    21421 gcggaaaaat tgaagtagaa ttaagcattt ttttagcaaa cacaacataa aaaatttgga
    21481 gaagattatg cctattttac gttcagcaac ttccactcag ggtcgtaata tggcgggggc
    21541 tcgtgcatta tggcgtgcaa ccggtatgaa agaaaatgat tttggtaagc cgattattgc
    21601 agtggtgaac tcattcaccc aatttgtgcc ggggcacgtc cacttaaaag atatggggca
    21661 gttggttgcg gcagaaattg aaaaagccgg tggggtggca aaagaattca acaccattgc
    21721 ggttgatgac ggcattgcaa tgggacacgg cggaatgctt tattctttac caagccgtga
    21781 tttaattgca gacagtgtgg aatatatggt gaatgctcac tgtgctgatg cgatggtgtg
    21841 tatctctaac tgcgataaaa tcaccccggg aatgttaatg gcagcaatgc ggttaaatat
    21901 tccgactatt tttgtctctg gtggcccgat ggaagccgga aaaactaaac tttccgatca
    21961 attaattcgc ttggatttag tcgatgcaat gatcgaaagt gccgacccga atgtgtctga
    22021 tgaacgtatt gatgcgattg aacgtagtgc ttgcccgact tgtggttctt gttcaggtat
    22081 gttcaccgca aactcaatga actgtttaac tgaagcttta ggcttaagtt taccgggcaa
    22141 tggttcaatg ttggcaactc atgctgaccg taaagagctt ttcctaagag caggtcgtga
    22201 aattgtggaa ctttgccgta aatattacca acaagacgat gagagcgtgt tacctcgctc
    22261 aatcgctacc ttcgatgcat ttgaaaatgc aatgagcctt gatattgcaa tgggtggttc
    22321 aagtaatacc gtgcttcatt tactagcgac tgctcaagaa gccggcgttg attttaaaat
    22381 ggaagatatt gaccgcctct ctcgtgtcgt gccgtgctta agtaaaattg ccccgaatac
    22441 caataaatac catatggaag acgtacaccg tgccggtggg attatgggct tgctgggcga
    22501 attagatcgt gcaggtttaa tccatcgcca cgttaaaaca gtgctaggtt taacgataga
    22561 agagcaactg aatcaatacg atattattcg taataaagat gaagatttac acaaattctt
    22621 ccgtgcaggt ccggcaggaa ttcgtactac taaggctttc tcgcaagatt gccgttggga
    22681 cactgttgat gatgaccgtg taaacggctg tattcgcaat gtggaaaatg ctgtgaccaa
    22741 agagggcggg ttagcggtat tatttgggaa tattgcagaa gatggatgta ttgttaaaac
    22801 cgcaggggta gatgagtcta tttggaaatt cactggcacc gcaatcgtgt ttgaaagcca
    22861 agaagatgcg gtagcaggta ttttaggcgg aaaagtgaaa gaagggcata ttgtgattat
    22921 ccgctatgaa ggtccgaaag gcggcccggg tatgcaagaa atgctttatc caactagtta
    22981 tttgaaatca atgggcttag gcaaaaaatg tgctttatta actgacggtc gtttctctgg
    23041 cggtacctca gggttatcta tcggacacgc ttcaccggaa gccgcttcag gaggagcgat
    23101 tgccttaatt aatgatggcg atacggtggc gattgatatt ccgaatcgtt cgattaactt
    23161 aatggtttca gatgaagaac ttgctgctcg ccgtgcagaa atggaagccc gtggcgataa
    23221 agcgtggcag ccgctaaaac gtgagcgaga agtgtcgttt gcactaaaag tgtttggaca
    23281 ttttgccacc tctgctgata aaggtgcggt gagggataaa tcgctgttaa agtaaataaa
    23341 ttagaaaaaa gaagcatttc aataatatat tgatctgctc tttattcagc tgaatattta
    23401 atctagctga atggagagca gatcgatagc ctaatttaca tctttttgtt ttgatacagg
    23461 gaaatgtatt acaagcattt tgccggtttt ggcagacctg caattttagt ggcttgtttt
    23521 gcaggaccat caggaaacaa gcgttgtaaa taacggctgt tgcctttttc ttcaccgaat
    23581 ttttgtgcca ttgtctttac cagcattcga attgctggtg aagttttgta ttcttggtag
    23641 aaatcccgca ccagataaat aatttcccaa tgttctgcgg ttaagctaat ttgctctttt
    23701 tcggcgattt tttctgctaa ttctacagac caatcattta aattagttaa atagcctgaa
    23761 gcatcggttg ggtattggat attatttaat tcaatcgtca tcaaataaaa atgccacata
    23821 atgtggcatt cctcttaaac taaaacgcta gtcgtcacta cctagcacac cgaagatttg
    23881 taagaagctt acaaataggt tgtagataga cacatataaa tcaacggttg cacgaatgta
    23941 gttggtttcg ccaccgtgaa taatgttgct ggttgccagt aaaatcgcac cgcttgagaa
    24001 aatgacaaac aagctgctta gggctaaact taatgccgga attgctaaga agatattggc
    24061 aataataccg actaataata ccacaaacag ggcaaccatc attccgctga taaagctcat
    24121 atcttttttg gtggttaata cataagctga acaagcgaag aaaaccaatg cggttgcacc
    24181 gaatgcaagg gcgacaatat cccctaaacc cgcaccgatg taacggttta aaataggacc
    24241 taaggtatag cctaagaagc cggttaaagc aaatacgctt aagatacccg cactgctgtt
    24301 tgaggtggca ttcgtcaaga aaagtaagcc gtaaaagccg accaataatc cccaccacgg
    24361 catagccggt gcgttcattt gaattgcaac aaaagcaaca actgcggaga aagtcagggt
    24421 cattgccaat aacatatagg tattgcgaag cactttgtgg gtgctaatta gagattcacc
    24481 agttgaatag ctgtgagcta aacgattttc cataaaaatt ccttctgttt ttgtgtttaa
    24541 atcggaacat ccgatggatt aatatctatg gataaatttc cataaatcaa gaagtaaggt
    24601 agccgtaatt tattgtaaag tcaatgcgat tttgtaacag aagagtaaaa aaaaacattt
    24661 agttgtgtta cacttaatac cactctactt tatattcctt ttcatcgatg aattcgctat
    24721 gaagctcaat ttcccaactt atttaacctt atttcgggta ggattaaccc cactttttat
    24781 tgtggctttt tatctgccga caaaatatgc gcctgaaatt tcaacactta ttttttttat
    24841 tgcatcgatt accgatgcct ttgacggcta tttagcacgc aaatggaatc aaaccacccg
    24901 acttggtgca tttttagatc ctgttgcgga taaagtcttg gtagctgttg cgtttgtctg
    24961 cgtggcggag tattaccata cttggtggat tactattcca atctgcatta tgattgcccg
    25021 tgaaattatt atttcggctt tgcgtgaatg gatggcggag cttggggaaa gggccagtgt
    25081 tgccgtttcg atttggggga aagtaaaaac gactgctcaa atgctcgcat taggtggaat
    25141 gttatggaga cagaaccaac taatggagat tttagccttt attctgcttt atattgcagt
    25201 gggtttaacg atctggtcta tgatgcagta tttaaatgct tcaaagaata gtctattgaa
    25261 gtcataagcg gtcatatttt tattcttttt tgcaatttgt agagtggaaa tatcgctcta
    25321 caattttcaa ttttatcaac tctaatgtct gaatttaacg ctaaatcctt cctgttaaat
    25381 gtgcctcacc aaccgggtgt ttatcgtatg tatgatagta aaggcacgat aatctatgtg
    25441 ggtaaagcca aagatttaaa aaagcgttta gccagctatt ttcgtagcca actttccagt
    25501 aaaaaaacgg aagccttggt ggcaaatctt gctaatattg aaacgacgat cactcattct
    25561 gaaacagagg cgttactcct tgaacataat tatattaagg aaaatcagcc gaaatataat
    25621 gtgttgctca gagatgacaa atcttatcct tatattctgt taactaaaca taagcatcct
    25681 cgtttaacag catttcgtgg tagtaaaaag atcgccggtg aatattttgg gccttatccg
    25741 aatgttacgg cagttcggga aacactgaat ttattgcaaa aaatttttcc tattcgtcag
    25801 tgtgaagata cttattataa aaaccgttca cgaccttgct tacagtatca gatcggacgc
    25861 tgtttagccc cttgtgtaga gggctgttat tcacccgttg aatacgatca gcaggttaat
    25921 ttggttcgtt tgtttttaca gggaaaagat caccaagtag tcgagcatct ggtacagaaa
    25981 atggaagatg cggcggaggc tttggatttt gaaggtgcgg cacgttttcg ggatcaaatt
    26041 caatcagtaa gagcggtgca agaaaaacaa ttcgtctcta atgataggct agatgatctt
    26101 gatattatct cgatcgttta tcaaaatggg attgcctgtg tgcatatctt atttgttagg
    26161 caaggtaagg tactaggcaa tcgttcttac tttccaaaag tgccaagtaa tacagattta
    26221 accgagctcg cagatacctt tgtcggtcag ttttatttac aaatgaacca gcaccgcacc
    26281 atacctaacc aaattgtaat tgatcatcaa ttaagtgaat ctaaggcact cagtgaaatt
    26341 ttaagtgagc aagcagggca taaagtcagc attttagata atgccatcag aggtgataaa
    26401 cagcgttatt tagctttagc gagaactaat gcaatggcag cattagtttt acaacttaag
    26461 caagaatccc atattcaaag ccgttatcag gcattgaaag aaatgttgaa aatgtcagag
    26521 attaaaagaa tggagtgctt tgacatcagt catacaatgg gcaaccaaac agtggcttct
    26581 tgcgtggtgt ttgatgaaaa tgggccgcta aaatcggatt accgccgttt taacattgag
    26641 gggattaccg gaggtgatga ttatgcagca atggagcagg ctctcttgaa acgctataat
    26701 cgagaattac cgccagaaaa gatccctgat attattttta ttgatggtgg caaagggcag
    26761 ttgaaccgag cgttagatgt cttcgctaaa cttgatgtgg aatgggataa atcgaaaccg
    26821 cttttaattg gtgtggcaaa aggcgtagaa cgtaaagctg ggctggaaac tttaattatc
    26881 agcaaatggg ataaagaaat tcacttaccg ccagatagtc ttgccttgca tttaattcag
    26941 catattcgag atgaatccca ccagcatgcc attagtgggc atcgtaaaaa acgccaaaag
    27001 gcctttaccg aaagtggatt agaatctatt gccggtgtcg gtgcaaaacg ccgacaagcg
    27061 ttgctaaaat atttaggcgg aatgcagggg gtgaagtctg caaccttgga agagattcaa
    27121 tcagttccgg gaatttctaa agcgttggca gaggttattt ttgatacatt aaaaaatagt
    27181 taaattatca atagcgatat cgcttccagc cgtaatggta gcccactcct atgcttgggt
    27241 aaattatagg gtgaattggc agatttatgc tttctgagcg tttatcgctt tggtttaatg
    27301 gctcatcatg ttgctttgta tttttatcaa cagtttgctt attgattact cgttgatggt
    27361 aatcctgaac tgcttgcata tccattggta ctgtgctttg ttgttggggt gtcgaacagg
    27421 cggttagtgc aacgctcaat ccgagtaaaa ttaatttttt catatcattt ccttatattg
    27481 caaaatattt tgcttttttg accgcttatt ttgctattaa ttcttaaaaa gattatttta
    27541 tccataaaaa aggacgcact aggcgtcctc atttctattc tttaaaatta aagagcagat
    27601 tttgcttttt caactaaagc tgcgaaagca actttgtcaa atactgcgat gtcagctaag
    27661 atcttacggt cgatttcaac agatgctttt ttcaagccgt tgatgaattt gctgtaagat
    27721 aaaccgtttt gacgagctgc tgcgttaata cgagcaatcc ataattgacg gaattgacgt
    27781 ttacgttgac ggcggtcacg gtaagcatat tgagcagctt taactactgc ttggaaagca
    27841 acgcgataca cgcgtgaacg tgcaccataa taacctttag cagccttaag aactttctta
    27901 tggcgtgctc ttgcaataac accacgtttt acacgagcca ttatttaatc tcctaattgt
    27961 ctattttgat tggtggtcgt catcacgacc tttactaaga attctatccg tacgtccgta
    28021 ctttactaca ctacgctaac ctaaaaggct tatgcgtatg gtaagcacgc tactactaaa
    28081 acttggtcag ctttcgctac cattgatttg tgacgtaatt gacgtttacg tttagtggtt
    28141 ttcttagtca aaatgtgacg taagtgagat tgtttacgtt taaaaccgcc ggaagctgtt
    28201 tttttgaaac gcttagcagc accacgtact gttttaattt taggcattgt taaaaaactc
    28261 cgcattgttt gttagatatt atgaaaataa ggcgaatttt gtgaacaaaa ttacttggaa
    28321 gcacttattc tccgctatac gattttcatc gttaaaaagt caagcaggct gctgagtttg
    28381 cctgttgagc attttctctt tcttggctag gcaaaaaagc ttgcgaattt tagcgaaaat
    28441 ataaccgcta tgcaagccaa tttaagcttt atcaagaaaa aagcacatta aaacaatgtg
    28501 cttatcgaaa ttatttcttc ttaggtgcga tcaccatcac aacttggcga ccttccaatt
    28561 tgcctggggc tgactctacc attgcaattt ctgcagtatc tgctttgaca cgttctaaaa
    28621 cgtccatacc gatttcttgg tgagccattt cacgaccacg gaaacgcact gtgattttta
    28681 ctttatcccc atcttctaag aaacggataa tgctacgaag tttaacttga taatcgccat
    28741 catcagttcc cggacggaat ttgatctctt taacttgaac aactttttgt tttttctttt
    28801 gttcttttgc tgctttctct ttttcgtaga tgaacttacc atagttcata atacgacaaa
    28861 ctggtggttc agcatttggg ctgatttcca ctaaatccaa ttcagcttct tctgctctat
    28921 ttagagcatc ttgaagtgat acaataccaa cttgttcgcc gttttcatcg gttaagcgaa
    28981 cttcttttac gccacgaatt tcgtcattaa gacgatgtgc acgatttgat tgaacacgtt
    29041 ttacaggttt aatagcctta ttccttctag taaatttttg cttaaatttt accgcttgag
    29101 agcgtataaa tattttagat tgcttgtttt aagtgattaa aaaacagcta aacgtgcgga
    29161 ttctataaga ttttcagtgc ttatgcaata ataaagccct tatttaactg cctattttcg
    29221 gttattttga tattctttga ttaaactcat aaatgcttgc ccaaatcgtt caaattttcg
    29281 ttcaccaaca ccattaattt ctaacatttc cacttttgaa gtcgggagaa attctgccat
    29341 ttcttgcaag gtggcatcgt taaagacgat ataaggtgga atattttcga ggtcagctat
    29401 ctgcttgcgt aaaaaacgta agcgtgcgaa taggtctttg tcatagcgat gacttgcttg
    29461 tttttgcaca aatgcagtcg cagatatacc taaacgtggc aatgcaagct gaagttgctt
    29521 ttctccacgc aaaaatggtc tggcactttc ggttaattgc agagcggaat ggttagcaat
    29581 attttgaata atcaacccta aatgaatcag ttgccgcacc acattttgcc aataatgttg
    29641 gctttgttct tttccgatac cataaacgga aagttgatcg tgttgatgtt cacgaatttt
    29701 gagattgttc attcctcgca ataccgcaat aatatggtgc tgaccgaaaa tttgaccggt
    29761 gcggtaaatc accgacatca ctttttgggc atcaagtaag ccatcgtatt gttgcggtgg
    29821 atctaaacaa atatcgcagt ttttgcattg ctcttggcga tgttccccaa agtagttgag
    29881 taagactaaa cggcggcaag tctgtgattc ggcgaaatcg ccaattgcct gtaatttatg
    29941 ctgtttaata tttctctgtt cgctttccgg ctcttccaat aatatttttt gtaaccaagc
    30001 ataatcgcta ggatcataaa aaagcacggc ttcagaaggg agatcatctc gcccggctcg
    30061 tccggtttct tgatagtaag attcgataga gcgaggtaaa tcgaaatgta ccacaaaacg
    30121 tacgttggat ttgttgatcc ccataccaaa cgcaatagtg gcaaccacaa tttgaatatc
    30181 atcacgctga aaggcattct gcactcgttc tctctgttca aaactcatac cggcgtgata
    30241 gcccatcacg ctgattttac gggctgagag tttctcggtg atttcttcca cttttttgcg
    30301 actgttgcag taaacaatac cgcttttgcc ttgctgtttg ctgatgaatt taatgagctg
    30361 ttcaagcggt ttaaattttt cctgcacggt gtagcgaata ttggggcgat caaagctgcc
    30421 taaatagata tgtgggctat ttaagcgtaa atgatgcaga atatcggagc gggttgttag
    30481 atctgccgtg gcggtgagtg ccatcaacgg cacattcggg aaagtgtttc gtaagccacc
    30541 tagcagggta tattcagggc ggaaatcgtg cccccattgg gaaacacaat gggcttcatc
    30601 aaccgcaata aagctgattt tacatagcga aataaagtgg aaaaagcctt gagtcattac
    30661 cttttcaggg gaaagataga gtaattttaa ttgaccggat aaggcttttt gttccacaag
    30721 ttgctgctct tcgagcgttt gagtggagtt aagataagct gcttcaatgc cgttggtgat
    30781 aagttgatcc acctggtctt tcatcaacga aataagcggc gaaatcacca aagtgatgcc
    30841 gtctaggcac aaagccggca cttggtagca aagggatttg ccaccgcctg ttgtcataat
    30901 cacgaggcaa tcacgatttt ccaacacggc attgataact tcttcttgcc cgtctcggaa
    30961 tttttgatag ccaaaaatat tatttaaaac agaaattgcg gtggtgttca ttggtagttg
    31021 gttgctactt atgatagtac tcgtcttctg agagtatctt ttaaaatgaa aataaagcac
    31081 tcatcaaaga cgagtgctgt cttagttaac aattaggcat tagaaagaaa cgctttctcc
    31141 gtgtcgagca aaagcttctt ctaaatgttg ccagaacgag cgaccttcat ctgttaccca
    31201 ttcgccttct acatttttaa agtggaaacc acccaatttg ctggcaagcc ataattccag
    31261 cattgcctct tgtttattaa tgataacttg cgattcatca tcaaaggtta aggtgcagac
    31321 cgctccttgg atttcagtat cgactgataa tccttcgtca taaatttttt cttcaatttg
    31381 ttgccatact tgctctacgg cttggtggaa ttgtgctgtg ttcattggtg tatccttatt
    31441 tgaatgttat ataagtagta aatacttttt gttttagctg tttaaatggt ctgtaaagtt
    31501 ctttttgtat ttttgttaag aaataattag gctttttaag tttagcttga ttttttattt
    31561 tatcctcat
//
LOCUS       DANLXD010000016        30681 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.016, whole genome shotgun sequence.
ACCESSION   DANLXD010000016 DANLXD010000000
VERSION     DANLXD010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 30681)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30681)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30681
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.016"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            1..507
                     /locus_tag="PXD18_000585"
     CDS             1..507
                     /locus_tag="PXD18_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HDL6301046.1"
                     /translation="MAMSNIGLDKEIAKKLADELNGLLATYQVFYTNVRGYHWNVRGV
                     NFFELHAKFEEIYDDLVTKVDEIAERILTLGHTPQNAFSQYLTKSQIQEHIGVSAAQE
                     CLRGTLNGFKTLLGQQREILALANDANDEGTASQMSDYIKEQEKLVWMFTAACAECSD
                     YAQGCSCN"
     gene            566..1279
                     /locus_tag="PXD18_000586"
     CDS             566..1279
                     /locus_tag="PXD18_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HDL6301047.1"
                     /translation="MAMSQGFQFKQFFIRHDRCAMKVNTDGILLGAIAHIKDCQNILD
                     LGIGSGLVALMLAQRTDDCCHITALELEPNAYQQAVENAQNSAWANRISVLQGDVMQQ
                     AFEQKFDLIVSNPPYFADSLAARTTERDLARSISHYSHLNWLAKAKPWLAENGKITLI
                     LPIAAAEKLVDQSEQIGLYCVEQWLIFTKSGKLAKRSIVSFSLNKQKREHKELIIYDL
                     DNCYTTEFKRLTQDFYLNF"
     gene            complement(1390..2394)
                     /locus_tag="PXD18_000587"
     CDS             complement(1390..2394)
                     /locus_tag="PXD18_000587"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005651072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDL6301048.1"
                     /translation="MAFNLKNRHLLSLVNHTEREIRFLLDLARDLKRAKYAGTEQQKL
                     KGKNIALIFEKTSTRTRCAFEVAAYDQGAHVTYIDPNSSQIGHKESMKDTARVLGRMY
                     DAIQYRGFKQSVVQELADYAGVPVFNGLTDEFHPTQMLADVLTMIENCEKPLSQISYV
                     YIGDARNNMGNSLLLIGAKLGMDVRICAPKALLPEDAFVKMCEKFAAESGARMTVTED
                     IETAIKGVDFVHTDVWVSMGEPLESWTERIDLLMPYRVTPELMQATDNPKVKFMHCLP
                     AFHNSETKVGKEIAEKYPALANGIEVTEEVFESPMNVAFEQAENRMHTIKAVMVASLA
                     "
     gene            complement(2482..3321)
                     /locus_tag="PXD18_000588"
     CDS             complement(2482..3321)
                     /locus_tag="PXD18_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HDL6301049.1"
                     /translation="MQSYPYLLVNVFATSHFGGNPLAVFYEADGLTDLQMQLIARQFN
                     LSEVVFIQSSTDSQAVKKLKIFTPDYEMPFAGHPTVGAAFVLHSAFDFPTTYRLQTNA
                     GLVAIQHQHNVTTFALTNGVNLENTPLSRAECASILGLNVADIASEPCYVNTGVEQLL
                     VELASQQAVEKCKINANLAEKAFLKDSVYVWCREGNEAKVRLFFQSQGSIVEDPGTGS
                     AAANLGGWHIAQGKIPIQLQISQGDEIQRPNRLLLKVDQNGKIFVGGEVILVGKGEFY
                     LPE"
     gene            3511..4845
                     /locus_tag="PXD18_000589"
     CDS             3511..4845
                     /locus_tag="PXD18_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDL6301050.1"
                     /translation="MLYAEFLLLLAFLYAGSRYGGIGLGVVSGIGLFVEVFFLGMPLS
                     APPISVMLVILAVVTCASILEAAGGLKFMLQVAERILRSNPKRITFLGPLVTYLMTLM
                     LGTGHSVYSIMPIIGDIALKNKIRPERPMAAASVASQLGITGSPLSAAVAYYLTEIVK
                     LPGFEGVTLLNVVGVTITATFCGVIAMSLYSLRRGKELEDDPEYQRRMQDPELRKQIE
                     QTSATSLDEKLPASAKNSVYLFLAAIATIVIIAMIPAIKPTVAATGKVAGMDQIIQIV
                     MLTFGGLILILTKTDPKKVPNGIVFKSGMVATIAIFGIAWMSDTYFTHAMPAFKEGVT
                     EMVRAQPWTFAFALFAVSVVVNSQAVTAKMLLPVGIAMGLPAPLLVGLMPATYAYFFI
                     PNYPSDIATVNFDVTGTTKIGKYYFNHSFMAPGLVGVITACIVGIAVANVLI"
     gene            complement(4925..5335)
                     /locus_tag="PXD18_000590"
     CDS             complement(4925..5335)
                     /locus_tag="PXD18_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDL6301051.1"
                     /translation="MNSTLTNLQPLAFLITRVVAGYMFLLHGTAKFFEFPMSMTNGNG
                     SVPLASIYGVGGILEIVGGIFFILGLFTRQTAFILSGMMAYAFFIAHGAQGNVLLPLL
                     NGGELAGVYSVLFLTYIFIGGGKYSLDAKLFNKA"
     gene            complement(5458..6135)
                     /locus_tag="PXD18_000591"
     CDS             complement(5458..6135)
                     /locus_tag="PXD18_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDL6301052.1"
                     /translation="MNLFGFRCFHCNHPLAIGVQGICSHCQKLLKPTPYCRHCGMSAV
                     EFRNACGYCLKNEPKWHKLVRVNEYRAPLSHWVHQFKFQQQYWWDQALARQLLLAIKQ
                     AQREQVLSLPEVIMPVPLFWHRHWKRGFNQSELLCDWLSKWLQIPLDTQSLQRVRATV
                     SQRELTAAERRKNLRGAFFYQPLKAYKRVAIVDDVLTTGSTLNVICAELLKAGVVEIQ
                     VWVLARA"
     gene            6253..7065
                     /locus_tag="PXD18_000592"
     CDS             6253..7065
                     /locus_tag="PXD18_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDL6301053.1"
                     /translation="MKSLQKPIKIVFFDIDDTLYVKHKAYIPKSITEQVLPRLKAKGI
                     IPAIATGRNHGCFPEALKPYLNPEIGFELFVTINGQYNFYKDQIISDYSLSREQIERI
                     IEKANALGILYAFITPMTIAVSETNPIVHEAVLPITPNYLIDPHYYEKEKIVQMLLFY
                     TEEQKQAVENSGIFANDLKEARWHPNAVDILRKENSKARGIQDVLATLNIEIESAMAF
                     GDGINDLEMLPTVGVGVAMGNGVPELKAVADFITKPLEEDGILYALETLEVI"
     gene            complement(7113..7382)
                     /locus_tag="PXD18_000593"
     CDS             complement(7113..7382)
                     /locus_tag="PXD18_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDL6301054.1"
                     /translation="MGLLYLLLLNTLIGYGSYGEALNHWDTSKVSIVTTMLPIFTMIF
                     SNLSYYFYPHIFAKPDMNWISYLGALVVVSGAILAIAGDKLFRRN"
     gene            complement(7355..8032)
                     /locus_tag="PXD18_000594"
     CDS             complement(7355..8032)
                     /locus_tag="PXD18_000594"
                     /inference="COORDINATES: protein motif:HMM:NF013088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6301055.1"
                     /translation="MKQRPLLGFSLALTAAMTWGTLPIAAQQVLKVIDAQTLVWVRFV
                     VASVGLLLILGFAKRLPKLTACSKKELGLILLGVCGLSANFFLFAEALHYVSPTINQV
                     LWQLAPFSMILLGVLLFKEKFGLFQKIGFVLLIAGLVAFFNDKFAEILQLNTYALGVL
                     LSAGASLIWVLYGVAQKLLLAKFNSQQVLFIIYIGCSLLMLPFASPAQLGNLEDGFLW
                     GCFIYCC"
     gene            complement(8134..8391)
                     /gene="rpmA"
                     /locus_tag="PXD18_000595"
     CDS             complement(8134..8391)
                     /gene="rpmA"
                     /locus_tag="PXD18_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007369914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HDL6301056.1"
                     /translation="MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTK
                     FHAGSNVGMGKDHTLFATADGKVKFEVKGEKSRKYVSIIAD"
     gene            complement(8412..8723)
                     /gene="rplU"
                     /locus_tag="PXD18_000596"
     CDS             complement(8412..8723)
                     /gene="rplU"
                     /locus_tag="PXD18_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015960603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HDL6301057.1"
                     /translation="MYAVFQSGGKQHRVSEGQVVRLEKLELATGEKVEFDSVLMVVNG
                     EDVKIGAPVVAGAKVVAEVVAQGRGEKVKIVKFRRRKHSRKQQGHRQWFTEVKITGIQ
                     A"
     gene            9001..9999
                     /gene="ispB"
                     /locus_tag="PXD18_000597"
     CDS             9001..9999
                     /gene="ispB"
                     /locus_tag="PXD18_000597"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HDL6301058.1"
                     /translation="MAVQLFSLEQIQALANEDMQAVNAEILAQLNSEVLLINQLGHYI
                     IAGGGKRIRPLIAVLAARALGYRGKKHITAAAFIEFVHTATLLHDDVVDESDMRRGRP
                     TANAHFGNAASVLVGDFIYTRSFQMMTDLDSLRVLKVMSAATNALAEGEVQQLMNVND
                     PNTTEANYMRVIYNKTARLFEAATQCVAIAADASEEIETALKNYGCYLGTAFQLIDDI
                     LDYSAQSESLGKNVGDDFVEGKPTLPLLHAMHAADKAGKTTQAELIRNAIENGGELEQ
                     IPQVLAIMQEHQSLDYAMQKAREEAQKAVDSLGVLPESEYKQALVSLAYLSVDRSY"
     gene            10102..10848
                     /locus_tag="PXD18_000598"
     CDS             10102..10848
                     /locus_tag="PXD18_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HDL6301059.1"
                     /translation="MTEQNQRPQEHIESVRARRRAQNQKKGPNAPFVREKLTLPNGHN
                     KLLLHSCCAPCSGEVMEAIHASGIEFTIYFYNPNIHPLKEYLIRKEENIRFAEKWGIP
                     FIDLDDDYENDRKEWFKKAKGMEWEPERGIRCTMCFDMRFEKAAEYAHNNGFPVFTSC
                     LGISRWKDMNQINDCGHRAAAKFDDVVYWDYNWRKGGGSQRMIEISKRERFYQQEYCG
                     CVYSLRDSNKWRLETGRQRIEIGKLYYSPD"
     gene            11265..12200
                     /gene="fabD"
                     /locus_tag="PXD18_000599"
     CDS             11265..12200
                     /gene="fabD"
                     /locus_tag="PXD18_000599"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HDL6301060.1"
                     /translation="MSKFAMVFPGQGSQAVGMLADLAPQYPIVEETFKQASDVLGYDL
                     WDLVQNGTAEELGQTHRTQPALLASSVALFRIWQQKFPEQKPAVMAGHSLGEYSALVC
                     AGVLDFQDAIKLVELRGRAMQEAVPAGSGAMFAIIGLDNESIIKACEQAASETGEIVS
                     AVNFNSPGQVVIAGTKAAAEKAGELCKAAGAKRALPLAVSVPSHCALMKPAAEKLAEA
                     LQNIELNQPLVPVINNVDVAVETDADTIRNALVRQLYSPVRWTETVEKMAQDGITTLY
                     EIGPNKVLTGLAGRIVKELSAKAVNDVASFEAVEA"
     gene            12217..12681
                     /locus_tag="PXD18_000600"
     CDS             12217..12681
                     /locus_tag="PXD18_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301061.1"
                     /translation="MSKETLFMLISALIALVILPLAYTVGIAKETLGGNMGMLSIAAG
                     CSFLAYFLSLNPKIRHAFIGGSAITAAAIQAWVLYGVLLSENDPKSAVVLFQIYLFSS
                     LGPLFFSAIWAFTRPRWIYPKQGSAVKYALFGGLTTVINYLITLFIFYILTL"
     gene            12702..13424
                     /gene="fabG"
                     /locus_tag="PXD18_000601"
     CDS             12702..13424
                     /gene="fabG"
                     /locus_tag="PXD18_000601"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDL6301062.1"
                     /translation="MSKIALVTGATRGIGKAIAEELVAKGYIVVGTATSEKGAESISA
                     YLGENGKGLVLNVADAESIESVLKQIKETFGDVDVLVNNAGITRDGLLMRMKDEDWFD
                     IIQTNLTSVYRLSKAVLRPMMKKGGRIITIGSVVGSMGNPGQTNYCAAKAGLVGFSKS
                     LAKEVASRGITVNVVAPGFIATDMTDELTEDQKNAILSQIPAGELGSPQDIAKAVAFL
                     ASDDARYINGETIHVNGGLYMS"
     gene            13543..14841
                     /gene="brnQ"
                     /locus_tag="PXD18_000602"
     CDS             13543..14841
                     /gene="brnQ"
                     /locus_tag="PXD18_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HDL6301063.1"
                     /translation="MTRNTLVVGFLLFAIFFGAGNLIFPPKLGYESSTEFFSAISGFV
                     LTGVGLPLLGIIVSAFYNGGYKSALDKIHPWFSLAFLTSIYLAIGPFFAGPRTAATAY
                     EMAIMPFLGDSSQVSMLIFTLIYFAFTLWLALNPNKMVDRIGAILTPILLITIIGLVI
                     RAGFILDTDPQITTPNTNEQSYFFKGMVDGYLTMDALASLAYSVIVLNAIRGKGVSQA
                     ALQRQTVSAGLVAAVALAVIYISLGWIGNNMPISANTLSMLSERKLDLGTYILNTVTT
                     QAFGELGRSVLGVIVSLACLTTAVGLAVSVSEYFNEIFPKISYKVYAILFTVISFTVA
                     NQGLKEVISKSIPVLLVLYPIAMTVILMLLINLVIKLPLSAQRLSLLLVTIVAIASVA
                     GVGFTENLPLKSYSMEWLPFAIIGAIIGAIIHPLTGRKHK"
     gene            14887..15711
                     /gene="mutM"
                     /locus_tag="PXD18_000603"
     CDS             14887..15711
                     /gene="mutM"
                     /locus_tag="PXD18_000603"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HDL6301064.1"
                     /translation="MPELPEVETSVRGVSPYLVGQTIEQIIVRQPKLRWTVSPELSQM
                     AGAKITAVERRAKYLIIRTDKGDILVHLGMSGSLGILQERQQKEIGKHDHVDLITQNG
                     TILRYNDPRKFGCWLWAEKAEDHELLRKLGPEPLSNDFTADYLFAKSRKKTTACKTFI
                     MTNEVVVGVGNIYACESLFMAGIHPELAAQNLTKKQCERLVKTIKEVLTKAIIQGGTT
                     LKDFIQPDGKPGYFAQVLQVYGRKGETCNDCGKPIETKVIGQRNTYFCPKCQRLPK"
     gene            complement(15794..16228)
                     /gene="dtd"
                     /locus_tag="PXD18_000604"
     CDS             complement(15794..16228)
                     /gene="dtd"
                     /locus_tag="PXD18_000604"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HDL6301065.1"
                     /translation="MIGLIQRVKFAKVEVEGQVVGEIASGLLVLLGVEKDDDEAKADK
                     LLEKVLNYRVFSDSEGKMNLNVQQAGGSLLVVSQFTLAADTNKGLRPSFSKGASPVDA
                     ERLYAYFHQQAATKIHTQTGQFAADMQVSLQNDGPVTFWLQV"
     gene            complement(16203..17048)
                     /locus_tag="PXD18_000605"
     CDS             complement(16203..17048)
                     /locus_tag="PXD18_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor BrkB family protein"
                     /protein_id="HDL6301066.1"
                     /translation="MLNRLWRFIKLFAKRYNENNIAISAGYLTYSTMLAIVPFIVVLF
                     SIFTFFPIFHEANEQLKAFIYDNFAPSASEMVSEYIELFVSNAKQMGLVSFIGLFVVT
                     IMLIKSIDEALNTIWHDNRQRPMWFSFLLYFLILLFGPLLAGASIAISTYVMSLSIFN
                     GNGALSLGQHLLELMPFLLIWLLFTLVYKFIPIRKVKFQHAAIGALMAAIFFTLGKKA
                     FIWYITAFPSYQAIYGALAVLPIMLLWIQLSWQVVLLGGQFAAVLDEMETDKGSINDR
                     LNSAG"
     gene            complement(17050..18288)
                     /gene="proA"
                     /locus_tag="PXD18_000606"
     CDS             complement(17050..18288)
                     /gene="proA"
                     /locus_tag="PXD18_000606"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HDL6301067.1"
                     /translation="MQMIELAQQAKQASFELAQFGNLQKNQALLTIADSLEQRAEEIL
                     YANAKDIEFAQAQGISLAIIDRLLLNEDRLKDIANDVRNVAKLADPVGQVMDGGVLDS
                     GLKIERQRVPLGVILTIYEARPNVTIDVASLCLKTGNAVILRGGKETKFTNAVLVDVV
                     QDALEKAGLPKLAVQAVTDPDRALLLELLKLDRYIDMVIPRGGAGLHQFCKENSTIPV
                     IVGGIGVCHLFVEKTADQEKSLEVIANAKTQRPSTCNTLETLLVEKAIAVEFLPKLVA
                     KMQQLGVTIHSNDLQKIEGIEPLDQAKLSQEWLSLDLNVVVVNDLQQAVEHIRHYGSQ
                     HSEGILTSDYQLARQFVQQVDAAAVYINASTRFTDGGEFGLGAEVAVSTQKLHARGPM
                     GLEALTTYKWVCEGDYLVRG"
     gene            18572..20455
                     /gene="mutL"
                     /locus_tag="PXD18_000607"
     CDS             18572..20455
                     /gene="mutL"
                     /locus_tag="PXD18_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HDL6301068.1"
                     /translation="MINTTPKQLIHILPPQLANQIAAGEVVERPASVVKELVENSLDA
                     GANTIQIDIEKGGSQLIRIRDNGCGISKQDLPLALARHATSKISSLEDLEAILSLGFR
                     GEALASISSVSRLTLTSRTAEQTEAWQAYAQGREMAVEIQPASHPIGTTIEVANLFFN
                     TPARRKFLRTDKTEFAHIDEVVRRIALAKPNISFSLSHNGKIVRQYRKVQDNSVEQQQ
                     KRVAAICGDEFIQHSTYIDRQHGDLHLHGWVGSPALARLQNDLCYSYVNGRMMRDKTI
                     NHAIRQAYGDSIASGYYPAFVIFLDLDPTMVDVNVHPAKHEVRFHQGRLVHDFILQGV
                     LNSLQQTQPTLELRNEVNEPLPSYVQDTNRQAAGQNIFVSQTAPQAAEFTQKNASRSS
                     YTPKFERSNSVSSSAQKWYKELVGGDLHQTTPTIKTQSTLVEPKTEPQTEHKTEAVSQ
                     KITQIAPLASHHSQALAIVKNQAVLIKEEENFYLLPLATLAELKLKLQLEKGQSQALL
                     IPLNLSLDQQQTERWQQTKEELTKLGFSISEKQWQAQTRLTVLSVPQAVREQNLQQLL
                     FALFNQTQAVNLAEFFAKKCEKPTACTLSDVIALLSEIELYANGKKELEGIRKEVDFS
                     KFL"
     gene            complement(20474..20743)
                     /locus_tag="PXD18_000608"
     CDS             complement(20474..20743)
                     /locus_tag="PXD18_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin, RelE/StbE family"
                     /protein_id="HDL6301069.1"
                     /translation="MREIEYSNAFKRDYKKCAVESLSSSLIEALYFLINDKPLPEKYC
                     DHALTGEWKGFRDCHIQPDLVLIYRKVEDDKLELLRIGSHSHLFG"
     gene            complement(20730..20996)
                     /locus_tag="PXD18_000609"
     CDS             complement(20730..20996)
                     /locus_tag="PXD18_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="HDL6301070.1"
                     /translation="MANSALVSVRISPEIKEQASEVLAGIGLTVSDVMRMTLAKIATE
                     KRFQFDYQPNFETAEVLRAVKNGEEKLHSANSIADLMEQLNARD"
     gene            21436..22389
                     /gene="miaA"
                     /locus_tag="PXD18_000610"
     CDS             21436..22389
                     /gene="miaA"
                     /locus_tag="PXD18_000610"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HDL6301071.1"
                     /translation="MNKKPLALFLMGPTASGKTDLAIALRQELPVEVISVDSALIYKG
                     MDIGTAKPSKEELALAPHRLIDILDPAESYSAMNFHADALREMADITSQGKIPLLVGG
                     TMLYYKALLEGLSPLPSADPAIRAEIESRAAQHGWATLHQELVKIDPIAGARINPNDS
                     QRINRALEVFYITGKTMTELTAQQGEALPYNILQFAIAPQDRAVLHQRIEQRFHKMIE
                     LGFEEEVKRLFLRKDLHINLPSIRCVGYRQMWEYLQGDISLDEAIFKGICATRQLAKR
                     QITWLRGWQGELTWLDSLAPTSSKAKMVEKIDHYLKNCDNI"
     gene            22458..22730
                     /gene="hfq"
                     /locus_tag="PXD18_000611"
     CDS             22458..22730
                     /gene="hfq"
                     /locus_tag="PXD18_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HDL6301072.1"
                     /translation="MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVI
                     LLKNTVSQMVYKHAISTVVPARALSHNNNNQAQHAQPAAEVTEQAE"
     gene            22750..24135
                     /gene="hflX"
                     /locus_tag="PXD18_000612"
     CDS             22750..24135
                     /gene="hflX"
                     /locus_tag="PXD18_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HDL6301073.1"
                     /translation="MLNESLPNSEENSAFGFALSEASQTTEAASPTDPENQDKAILVH
                     LYLGQHKDVENLLEFKTLAESAGVEVLATLTTSRQSSHIKYYVGQGKAEGIAEAVERL
                     GATVVLVNHQLSPAQTRNLQSLCGCRVVDRTGLILDIFAQRARSHEGKLQVELAQLRH
                     LSTRLVRRVTNQDQQKGGAVGLRGPGETQLETDRRLIKVRIQQLLNRLEKVSKQRNQN
                     RKTRQKADIPTVSLVGYTNAGKSTLFNAITQAGVYAADQLFATLDPTLRRIQVQDVGT
                     TILADTVGFIRFLPHDLVSAFKSTLQETTEATLLLHVIDGSDERKNENIDAVNQVLDE
                     IGALDIPTLLVFNKIDKLEGVEPHIERNADGTPVAVYLSAQENSGIELLFQAIQERLR
                     SNLVCENLLLPVTAGAIYAQFKAENCIKTEHFNEFGERIISIEINEVQWNKWVKQFPD
                     LAEYIELAKWG"
     gene            complement(24357..30428)
                     /locus_tag="PXD18_000613"
     CDS             complement(24357..30428)
                     /locus_tag="PXD18_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HDL6301074.1"
                     /translation="MNKIFKVIFNQTTQKMEVVSELARSQGKAASSTDKRGTIKLAAA
                     SILGGATLISGMAAFMLSATPAEAAVIIDRIEVQQKAPKKVVNGGIDIYTNTSLATDS
                     ITNPYNYFNPGSLSYADRTKLQESNNSVNKEKDSRLLYKSNTTSAIVIGHNAVALDNN
                     RKSRGKPKASGIAIGDYSYSGGGLSIAIGSFSRTASIGSVALGTSARAEGFNSFAAMR
                     QSAAIADYSTAIGSTSWANATASFAIGASATALGDRSFAIGSGTPQTVDGSYGHENRR
                     SIYDGQNNTLAFGTDAFSIGTKAKTNGNHSFAIGTNAWSGGFKLENSNISELGQVINP
                     DTAKVANNAFALGTNTRANSNDTLAFSTNASATGDGSIAFGVNSNTTGIGAIAFGNAS
                     KAWKSNAISIGWNANSHAEKVISIGSHSNASKDGAMAIGDTANSSGNNSVAIGYSANV
                     SKANATAVGTRANITHEGGTAIGFEAKSKGNYATAIAYNSTAKGKNSIAAGVNSTVSG
                     IRAAALGYNNTVSGKDTFVLGSNVTVKTKGSVILGSDSTEATATKEDTATVGTLKYSS
                     FAGDENVVDGDYVSVGNATNARQIKFVAPGKIASNSTDAINGSQLYAVADTLVKTGFN
                     ITADHSGLGGGAKEDNVKLGETVKYTSTDKNVVTTVTNNTIDFGLSDNISVGGKPGKD
                     GSVGVKGADGKDGVTIKPEAIVFHGVDGVNGKDGKDGKASIKVEKGAKGLDGNDGKDG
                     ESKTRIVYEKPNGDKEEVATLNDGLKFGANDGKVHDAKLNTQVDIKGATTNTDWAKFD
                     AGKNIMTQVVGNTITVALAKDLAGLDSATFGTQGDSTVINKDGVTIAKKDPNDATKSN
                     VTLTEDGLSNGGNQITNVDSGLKGKDGQPVKLTEAAGDVLNNAVNVGDLKNTVTETVT
                     EVTTDAFGLKDENNKEFKQNLGTTAKIIGDGNVKTNVVEKDGGHALEVSLVNNITVGK
                     DGEPGKVGIAGKDGKDAIALDGKDGAITVGRPGKDGIDGTIGVNGKDGSAVVLNGKDG
                     SIGLNGTNGKDGLTIKGTEGKPGLVGKDGLPGKDGVTRIQYQPTDGNGDPIGEPEQVA
                     TLNDGLHFKGDDATLVSKKLNETLEIIGGADKDKLTANNIGVNSKDGKLSVQLAKDLK
                     DLNSATFKPQDGENGQEGKGPTTVVNNNGVTITPKDGTDGKAVKLTEDGLDNGGNQIV
                     NVKSGIDGLAGKDGINGKDGKPITSVNDLTDDQLKEVGTNAANINDVVNASNDIIEKG
                     FSIAADNGETDHVKLGETVKYTSKDKNIITTVSDNVIDFTLNNDFTIGGPGKDGSIGV
                     KGADGTVGVTLNGKDGSIGLTGPKGADGKDGASATISVKDGAKGLDGNDGKDGESKTR
                     IVYEKPDGTTEEVATLNDGLRFVGDDGKEIVKKLNETLKISGGDTDLTNLSDNNIGVV
                     NNNGALTVKLAKDIDLTKDGSVTIGDTTVNNDGLTIKDGPSVTKAGINAGDKKIINVQ
                     DGEISATSKDAVNGSQLYQVQEVANAGWNLTANGKDKGNVKPGATVDLNNKDGNIIIT
                     KEGNNVTFGLKNNLTIGGKDGKDGQIGIAGKDGKDGVTIKGDGTITAGRDGKDGVDGS
                     IGATGKDGASVVLNGKDGSIGLTGPKGADGKDGASANIAVKDGAEGVDGTNGKDGLPG
                     ENGKTRIVYETKDKDGKTVTEQVATLNDGLIFSGNNEDVKNRQKLNTEVKVKGEGVDK
                     TASENFKSASGNINVKANGTDTLEVQLAKAIDLTEDGSVTTGDTTVNNNGLTIKDGPS
                     VTKGGIDAKGTKITNVKDGDVTATSKDVVSGSQLYNAMQNTGWYLTVDGNVAETSEKG
                     AQRVNNNGKVAVSGGKNIVVSRKGSTVEVATSSNLEFDSVKVGGTTISSTVAKDGVNE
                     LNIAGSKNAQTRITNVAPGVKGTDAVNVNQLKGAENRLNNRISNVDKDLRAGIAGALA
                     AGNLYHVTQPGKSMVSAGVGAYRGQGAIAVGYSRLSDNGKVGIKFSVNSNSRGDTGAA
                     ASVGYQW"
BASE COUNT         8986 a         6825 c         5991 g         8879 t
ORIGIN      
        1 atggcaatgt caaatatcgg tttagataaa gaaatcgcaa aaaaattagc agatgagtta
       61 aatggtttat tagctactta ccaagtgttt tacactaatg tacgtggcta ccattggaat
      121 gtacgtggtg tgaacttctt tgaattacat gcaaaatttg aagaaatcta cgatgattta
      181 gtgacaaaag tagatgaaat tgcagaacgt attttaacct taggtcacac acctcaaaat
      241 gcgttcagcc aatatttaac caagtcacaa attcaagaac atattggtgt ttcagctgca
      301 caagaatgtt tacgtggtac tttaaatggt ttcaaaacat tactgggaca acaacgtgaa
      361 attcttgctc tagcaaatga tgcaaacgat gaaggtactg cttctcaaat gagtgattac
      421 atcaaagaac aagaaaaatt agtatggatg ttcactgcag cttgtgctga atgttcagac
      481 tacgcacaag gttgttcttg taactaagtt gcaataatat aattaacccc cgataatgaa
      541 agattatcgg gggttacttt ttcagatagc tatgtcgcaa ggatttcaat ttaaacagtt
      601 ttttattcgg cacgacagat gtgcaatgaa agtcaataca gatggtattc tattgggagc
      661 gattgctcac ataaaagatt gtcagaatat tttagatctg ggtataggtt ctggtttagt
      721 agcacttatg cttgctcaga gaacagatga ttgttgtcac attactgcgt tggaacttga
      781 accaaatgcc taccaacaag cggtcgaaaa tgcccaaaat tctgcatggg caaatcggat
      841 ttccgttttg caaggtgatg tgatgcagca ggcatttgaa cagaaatttg acttgattgt
      901 tagtaaccca ccttattttg cagattcact tgcagctcga accacagaga gagatttagc
      961 tcgctcaatt agccattaca gccacttgaa ttggctggca aaagcaaaac catggttagc
     1021 agagaacggg aaaattacac tgattttacc tatagcagct gcagaaaaat tagttgacca
     1081 aagtgaacaa attggattgt attgtgttga acaatggtta atttttacca agagcggcaa
     1141 attggctaaa cgcagtatag tgagttttag tttaaacaag caaaagcgtg aacataaaga
     1201 gctgatcatc tatgatctag ataattgtta cactactgag tttaaaagac ttacccaaga
     1261 tttttatttg aatttttaat ttactccccg ggttagtgtt ttccacaaat cttcttcagc
     1321 tacgatgatc tagccttaag ctaaaaagca gattaccacc caagataatc cgctttttag
     1381 acttagctat tatgccaaac ttgctaccat taccgcttta atagtgtgca ttcgattttc
     1441 tgcttgctcg aatgccacat tcattggcga ttcaaacacc tcttcggtta cttcaatgcc
     1501 gtttgccagt gccggatatt tttcggcgat ctctttaccg actttagttt cactgttgtg
     1561 gaacgccggt aagcagtgca taaatttcac tttcgggttg tcggttgctt gcattaattc
     1621 aggcgttact cggtaaggca ttaataaatc tatacgttca gtccagctct ctagcggttc
     1681 acccattgaa acccaaacat cagtatgcac aaaatcgaca cctttaattg cagtctcaat
     1741 atcttcggtt accgtcattc ttgcccccga ttcagctgca aatttttcac acattttcac
     1801 gaatgcatct tccggtaata aggctttcgg ggcacaaatt cgcacgtcca tccccaattt
     1861 cgccccaatc aacaggagtg aattacccat attattgcga gcatcgccga tatagacata
     1921 actgatttgg ctaagcggtt tttcgcaatt ttcgatcatc gttagcacgt cagccaacat
     1981 ttgggttggg tggaattcat cggttaagcc gttaaacacc ggcacgccgg cataatcggc
     2041 aagctcttgt actaccgatt gtttaaagcc gcgatattga atcgcatcat acattctgcc
     2101 tagcactcgg gcggtatctt tcattgattc tttatgcccg atttgcgagg agttcgggtc
     2161 aatataggta acgtgagccc cttgatcgta agctgctact tcaaaggcac aacgagtacg
     2221 ggtcgaggtt ttctcaaaaa ttaaggcaat atttttgccc tttaattttt gctgctcagt
     2281 gccggcatat ttcgcccgtt ttaaatctct tgctaaatcc aacaaaaagc gaatttcacg
     2341 ctcagtgtgg tttactaaac tgagtaaatg tctgtttttt aagttaaatg ccattttgtt
     2401 tctccctgta aacattaaaa tttattttat gcaaaataat tgcataaaaa ttcacttata
     2461 gcaaacagaa tttgcttacc ctcattcggg taaataaaac tcgcctttgc cgactaaaat
     2521 aacctctccg ccaacaaaaa tcttcccgtt ttgatcgact tttaataaca ggcgattcgg
     2581 ccgttgaatt tcatcacctt gtgagatctg aagctggatt ggtattttgc cttgtgcaat
     2641 gtgccaaccg cctaaatttg ccgctgccga accggtgccg gggtcttcga caatcgaacc
     2701 ttgcgattga aaaaacagtc gcactttcgc ctcatttccc tcacgacacc aaacatatac
     2761 actgtctttc aaaaatgctt tttcagccag atttgcattt attttgcact tttcgaccgc
     2821 ttgttgagaa gctaactcaa ccaataactg ctccacgccg gtgtttacat aacaaggctc
     2881 ggacgcaata tccgcaacat tcagccccaa tattgaggca cattctgcac ggcttagcgg
     2941 tgtgttttcc aggttcacac cattggttaa agcaaaagta gtcacattat gttgatgttg
     3001 aatcgctacc aatccggcat tagtttgcaa gcgataggtt gttggaaaat caaaggcgga
     3061 atgcaacaca aaagccgctc caacagttgg gtggccggcg aacggcattt cataatcagg
     3121 cgtaaaaatt ttgagttttt tgaccgcttg tgaatcggtg gaagattgaa taaataccac
     3181 ttcagaaagg ttaaattggc gagcaataag ttgcatttgt aagtcggtta atccgtccgc
     3241 ttcataaaat actgcaagcg ggttgccgcc aaaatggctt gttgcaaaca cattcaccag
     3301 caaataagga tagctctgca tttatcactc cttacataaa cttaaagcca cattgggcga
     3361 aaattctacc attttggtgg cgaatcgtaa aattggaaaa tttatcggta tccctcttta
     3421 gagttaacta tttttgattt atctcaaagt tttaaaaaaa agattaggtc atacttcttt
     3481 ctagtgatta ttttttaatt tgaggttctt atgctttatg cagaattttt acttttatta
     3541 gcctttttat atgcaggtag ccgttacggt ggcatcggtt taggtgtggt ttccggcatc
     3601 ggcttatttg ttgaagtgtt cttcttagga atgccgcttt ccgctccgcc aattagcgtg
     3661 atgctcgtga ttttggctgt agttacttgt gcctccattc tagaagccgc tggcggtttg
     3721 aaatttatgt tgcaagttgc cgaacgcatt ttgcgtagca acccaaaacg tattaccttt
     3781 cttggcccac ttgtcactta tctgatgacc ttaatgctcg gcacagggca ttcggtttac
     3841 tctattatgc cgattatcgg tgatattgcc ttaaaaaata aaattcgccc ggaacgcccg
     3901 atggcagcag cctctgttgc ttcacaatta ggtattaccg gtagcccact ttctgctgca
     3961 gttgcctatt acttaaccga aatcgttaaa ttaccgggct ttgaaggggt gactttattg
     4021 aatgtagtcg gcgtaaccat caccgcaacc ttctgtggtg tgattgcgat gtcattatat
     4081 agcttacgtc gtggtaaaga gttggaagac gatcctgagt atcaacgccg tatgcaagac
     4141 cctgagctac gcaaacaaat cgagcaaacg agtgcaacgt ctttagacga aaaactaccg
     4201 gcaagtgcga aaaactcggt ttatctgttc ctagccgcta ttgcaaccat tgtgattatt
     4261 gcaatgattc cggctattaa accaacggtt gctgctacag gaaaagttgc cggtatggat
     4321 caaatcattc aaatcgtgat gctaactttc gggggtttaa tcttaatttt aactaaaacc
     4381 gacccgaaaa aagtaccaaa cggcatcgtt ttcaaatccg gtatggtagc aaccattgcg
     4441 attttcggga ttgcttggat gagtgatact tacttcaccc atgcaatgcc agcgttcaaa
     4501 gaaggggtaa cagaaatggt tcgagcccaa ccttggacat tcgccttcgc cttgtttgcg
     4561 gtatctgtag tagtaaacag ccaagccgta accgcaaaaa tgttattacc ggtaggcatt
     4621 gcaatgggct tgcctgctcc attattagtt ggtttaatgc cggcaactta tgcttacttc
     4681 tttattccga attatccgtc tgatatcgca accgttaact ttgacgtaac cggtacaact
     4741 aaaatcggta aatattactt caaccacagc tttatggctc cgggtttagt tggcgtaatt
     4801 actgcctgta ttgtcggtat cgccgttgca aatgtgctaa tttaatttta acaaaaaaac
     4861 aagcggtcag attaagtaaa ttttttacca aatctgaccg cttgattatt tactgcaaaa
     4921 ccaattaggc tttgttaaag agttttgcat ctaacgagta ttttccgcca ccgataaaaa
     4981 tataggttaa gaataatacc gaatacacgc ctgctaattc accgccgttt aataaaggta
     5041 atagcacatt gccttgagct ccgtgagcaa taaagaacgc gtatgccatc atacctgaaa
     5101 ggataaacgc tgtttggcgg gtaaatagac ctaaaataaa gaaaattccg cccacaattt
     5161 ccaaaatacc gcctacacca taaatggagg caaggggtac actgccgttt ccgttggtca
     5221 tcgacattgg aaattcaaaa aatttcgctg tgccgtgtaa taaaaacata taaccggcaa
     5281 caacacgggt gattaaaaac gctaaaggtt gtaaatttgt taaagtagag ttcatttgct
     5341 ttccttaaaa taaattgtga tataaaggtc aattgattga ggcaggcatt ctattttaaa
     5401 aacctatact tcacaatcca gccgtcatga aatagattat ttaccattaa taaacaatta
     5461 ggctctcgct aacacccaaa cctgaatttc tactactcca gctttgagta actcggcaca
     5521 aattacattt aaggtggaac ctgtggtgag cacatcatca acaatcgcca ctcgtttata
     5581 ggcttttaac ggttgataga aaaatgcccc acgcagattt ttccgccgtt cagcagcggt
     5641 caattctctt tgtgagacgg ttgctctcac acgttgtaaa ctctgggtat ccagcggaat
     5701 ctgtaaccac ttcgataacc aatcacacaa taattcgctt tgattaaacc ctcttttcca
     5761 atgtctgtgc caaaaaagtg gtacaggcat aatcacttca ggcaagctca gaacctgttc
     5821 cctttgagct tgtttgattg ccagcagcaa ttgtcgggca agggcttgat cccaccaata
     5881 ttgctgctgg aacttaaatt gatgtaccca atgtgaaagt ggcgctcggt attcatttac
     5941 cctcactaat ttatgccact tcggttcatt tttcaaacaa tagccacaag cgtttcgaaa
     6001 ctccaccgca ctcattccac aatgacgaca ataaggggtt ggttttagca atttttggca
     6061 atggctgcaa atgccttgca cgccaatagc gagtggatga ttacaatgaa agcaacggaa
     6121 gccgaataaa ttcacatttc ctccttttat ttgcagatta tcaaatttag ccttattttt
     6181 tccggctatt tttgtgacat cgctcgaaaa aagagtaaaa tctcattatc agtaaataaa
     6241 aaggaaaccg agatgaaatc cctccaaaaa ccgatcaaaa ttgtcttttt cgatattgat
     6301 gacaccctct atgtaaaaca taaagcctat attccaaaat caattaccga gcaggtatta
     6361 cctcgtttaa aagccaaagg cattattccg gccattgcca ccggcagaaa tcacggctgt
     6421 tttcctgaag ctctcaaacc ttatttaaac cctgaaatcg gttttgagct gtttgttacc
     6481 attaacgggc aatataattt ctataaagat caaataatta gtgattattc gttaagccgt
     6541 gagcaaattg aacgtattat cgaaaaagcg aatgctttgg gtattctgta tgcctttatt
     6601 acgccaatga cgattgcagt ttccgaaacc aatccgattg tgcacgaagc ggttttaccg
     6661 atcacaccga attatttgat cgatccacac tactacgaaa aagagaaaat tgtgcaaatg
     6721 ttactgttct acaccgaaga gcagaaacaa gcggtcgaaa atagtggcat ttttgcaaat
     6781 gatttaaaag aggctcgctg gcaccccaat gcggtagata ttctgcgaaa agaaaattcg
     6841 aaagctcgtg gcattcaaga tgtattagca accttgaata ttgagattga aagtgcgatg
     6901 gcatttggcg atggtattaa cgacttggaa atgctcccga ccgtaggtgt tggtgtggca
     6961 atgggtaatg gcgtgccgga attaaaagcg gtggcagatt tcatcaccaa gccgcttgag
     7021 gaagacggca ttctatacgc tcttgaaact cttgaggtga tttaaaagca agcggttgta
     7081 agtttttctc catttacaac cgcttgtagt ttctaattac gcctaaatag cttatcgcct
     7141 gcaatcgcta aaatcgcccc actgacgacc accaacgccc caagataact gatccaattc
     7201 atatccggct tggcaaaaat atgcggataa aaatagtagc taaggttgga aaagatcatc
     7261 gtaaaaatcg gcaacatcgt ggttacaatg ctaacctttg aagtatccca atgattcaac
     7321 gcctcaccgt atgaaccgta gccaattaag gtgttcaaca gcaataaata aagcaacccc
     7381 acagaaaacc atcctcaaga ttgcctaact gtgccggtga ggcaaacggt aacatcagca
     7441 gagaacagcc gatgtaaata ataaacagca cttgctgaga gttaaatttc gctaataata
     7501 atttttgagc cacgccgtat agcacccaaa tcaagctggc tccggcactc aataacactc
     7561 cgagagcgta ggtgttgagc tgtaaaattt cagcaaattt atcgttaaaa aatgcgacaa
     7621 gccctgcaat caataacaca aatccaatct tttgaaacaa gccgaacttt tccttaaaca
     7681 ataatacgcc tagtagaatc atcgaaaatg gagctaactg ccacaatact tggttaatgg
     7741 tgggcgaaac atagtgtaga gcctctgcaa acaaaaagaa atttgccgac agaccacaca
     7801 cccctaacaa aattaaaccg agttcttttt tgctacaagc ggtcaatttg ggtaaacgtt
     7861 ttgcaaatcc tagaatcagc aatagcccta ctgatgccac aacgaaccta acccaaacta
     7921 aagtttgggc atctatcact ttcaatactt gctgggcggc aatcggtagc gttccccagg
     7981 tcattgctgc ggttaatgca agtgaaaagc caagtaaggg gcgttgtttc atcgtggaaa
     8041 ttcctttttc tattctatgt ttctatattt tagaaagatt gagatacaaa aaaaccccgc
     8101 cattggcgag gtctcttatt gattttgaaa tgattagtca gcaatgatgc ttacatattt
     8161 acggcttttc tcgcctttca cttcaaattt aactttaccg tcagcagttg caaataaagt
     8221 gtggtcttta cccataccta catttgaacc tgcgtggaat ttagtaccac gttgacgaac
     8281 gataatgcta cctgctaata cagattcacc accgaaacgt ttaacaccaa ggcgtttagc
     8341 ttcagaatca cgaccgttac gagttgaacc accagctttt ttagttgcca tcttctagat
     8401 ctcctctgaa attatgcttg aatcccagtg attttcactt ctgtgaacca ctgacgatga
     8461 ccttgttgtt tacggctgtg tttacgacga cggaacttaa cgattttaac tttctcgcca
     8521 cgaccttgtg ctacaacttc agccactact tttgcacctg ctacaaccgg tgcaccgatt
     8581 ttaacatctt caccgttaac gaccattaac actgagtcaa attcaacttt ctcaccagtt
     8641 gcaagttcaa gtttttctaa acgaactact tgaccttcac ttactcggtg ttgtttgccg
     8701 ccactttgga aaactgcgta catatttact ccgctatgtg ccaactgctt ttgcttttag
     8761 gcactaaatt aattcataaa aatagggttg caattctacg gaaaaagatt cgaaagagca
     8821 agagcgattt tgagaatttt ttgaaatttg caaaaaatgg taaaaatact accgcttgtt
     8881 tcaactgcga ctaaaaaaca atagactgct ccgattttac aacaaaatca taattctttt
     8941 ttgaacacag gctaaattaa ggtagaatct actcaatttt cgtcttactt tatggattcg
     9001 atggctgtgc aacttttttc tttagaacaa attcaagccc ttgcgaatga agatatgcaa
     9061 gcggtaaatg ccgaaatttt agctcaactt aattccgaag tgctactgat taaccagctc
     9121 ggacattata tcatcgcagg cggtgggaaa cgtattcgcc cgttaattgc ggtgcttgcg
     9181 gctcgtgcct tgggttatcg tggtaaaaag catatcacgg cggctgcttt tattgagttt
     9241 gtgcatactg ctacactttt gcacgatgat gtagtcgatg aatccgatat gcgtcgtggc
     9301 agaccaaccg caaacgccca ttttggcaat gcggctagtg tattggtagg ggatttcatc
     9361 tatacccgtt cgttccagat gatgacggat ttagactctc tgcgtgtgtt aaaagtgatg
     9421 tctgccgcca ccaatgcgtt ggcagaaggg gaagttcagc aattaatgaa cgtgaacgac
     9481 ccaaacacca ctgaagcgaa ctatatgcgg gtcatttaca ataaaaccgc ccgcttgttt
     9541 gaagccgcca ctcaatgcgt ggcgattgcg gctgatgctt ctgaggaaat tgaaaccgca
     9601 ttaaaaaatt acggttgcta cttaggcacg gcattccagc tgattgacga tattttagac
     9661 tactccgctc aaagcgaaag tttaggcaaa aacgtaggcg atgactttgt ggaaggtaag
     9721 ccaaccttgc cattgctcca cgcaatgcac gctgccgaca aagcaggcaa aactactcaa
     9781 gcagagctga ttcgcaatgc tatcgaaaac ggcggcgaat tggaacaaat tccacaagta
     9841 ttggcaatta tgcaagaaca tcaatctctg gattatgcca tgcaaaaagc ccgtgaagaa
     9901 gcccaaaaag cggtggattc attaggggtt ttaccggaaa gcgagtacaa acaagccttg
     9961 gtttcattgg cgtatttatc ggtggatcgc tcttattaat ttgcaaaaaa tcatataaat
    10021 ttaaccactt gtaggggcaa atgatatttg ccccataacc tataattctt ttgggcaaat
    10081 gttatttgcc ccaacataac aatgactgaa caaaaccaac gaccccaaga acatattgaa
    10141 agcgtacgag cgagacgccg tgctcaaaat cagaaaaaag gcccgaatgc cccgtttgtg
    10201 cgtgagaaat taacgctgcc aaacggacat aacaaattac tgctgcactc ttgctgtgcc
    10261 ccttgctcgg gtgaggtaat ggaggctatt cacgcctccg gcattgagtt tacgatctat
    10321 ttttataacc cgaacattca cccgctgaaa gagtatttga tccgcaagga agagaatatt
    10381 cgctttgccg aaaagtgggg tattccgttt atcgatttag acgatgacta cgaaaacgac
    10441 cgcaaagagt ggttcaaaaa agccaaagga atggaatggg agccggaacg aggcattcgt
    10501 tgcacaatgt gctttgatat gcggtttgaa aaagcagcgg aatacgctca caacaacggt
    10561 ttccctgtat ttaccagttg cttaggcatt tcccgatgga aagatatgaa ccaaatcaac
    10621 gactgtggtc accgtgcagc agccaaattt gatgacgtgg tttactggga ctacaactgg
    10681 cgtaaaggcg gcggctcaca acgaatgatc gaaatcagca aacgtgaacg tttctaccag
    10741 caagaatact gcggttgcgt ctattcgtta agagatagca acaaatggcg gttggaaaca
    10801 gggcgtcagc ggattgaaat cggtaagctc tattactcac ccgattaaat gttacttttc
    10861 tttgcttcgc caaagaaaag taaccaaaag aaaggcgacc cgaacttcgc ttagttacga
    10921 tttccttaac ggaaaatttg taaactcgct acgctcaaac agtacaaatt ttcctagaaa
    10981 tcgcaagtcg ctcagacggg acaagcggta cattattcaa aattttttac aaaatatagt
    11041 gatgtactct tcccttctga accgcccgaa cgtgtttgaa ttggtaggaa aatttactct
    11101 gagcgaagcg aatgtaaatt ttccgtgaaa ccaattcaaa ctaagtgagg ataagcggtg
    11161 aagtaggggt gtttctttgg ttactttctt tgcacatgca aagaaagtaa cgaaaactca
    11221 gatatagatt tcaacttaaa aatttacaga aggaataata acaaatgtca aaattcgcta
    11281 tggttttccc cggtcaaggc tcacaagcgg ttggaatgct tgccgacctt gcgccacaat
    11341 atccaatcgt ggaagaaacc ttcaaacaag caagtgatgt gcttggctat gacttatggg
    11401 atttagtgca aaacggtact gccgaagagt tagggcaaac ccaccgcact caacctgcgt
    11461 tgcttgcctc aagcgtggca cttttccgca tttggcaaca aaaattccct gagcaaaaac
    11521 cagccgtgat ggcagggcat agtttgggtg aatactcagc gttggtgtgt gccggtgtgt
    11581 tggatttcca agatgcgatt aaattggtcg agttgcgtgg tcgtgcaatg caagaagccg
    11641 tgccggcagg cagcggtgcg atgtttgcga ttatcggttt agataacgaa agcattatta
    11701 aagcgtgcga gcaagcagca agcgagaccg gtgaaattgt ctctgcggta aactttaaca
    11761 gcccggggca agttgtgatt gccggcacaa aagcagcggc agaaaaagca ggagaattgt
    11821 gtaaagccgc aggtgcaaaa cgtgcgttac cattagcggt gagcgtacct tcacactgtg
    11881 ctttaatgaa accggcggca gaaaaattag ccgaagcctt gcaaaatatt gagctaaatc
    11941 aaccgcttgt ccctgttatc aacaacgtgg atgtggcagt ggaaacagat gccgatacca
    12001 ttcgtaatgc acttgttcgc caactttaca gccctgttcg ttggacggaa accgttgaaa
    12061 aaatggcaca agatggcatc actactttat atgaaatcgg gccaaacaaa gtcctaaccg
    12121 gtttagcagg tcgtattgta aaagaattat cagccaaagc ggtaaatgat gttgccagct
    12181 ttgaggcggt tgaggcttaa ttttcgggag cgtaaaatga gtaaagaaac cctatttatg
    12241 ctaataagtg cattgattgc cttagtgatt ttacctttag cttatactgt tggtatcgct
    12301 aaagaaacat taggcggaaa tatgggaatg ttatccattg ctgccggttg ctcattttta
    12361 gcctattttt taagtctaaa cccgaaaatt cgccacgcct ttatcggagg ttcagctatt
    12421 acagctgctg ctattcaagc ttgggtatta tatggtgtgc tattaagcga aaatgacccc
    12481 aaaagtgcgg tcgttttatt tcaaatttat ctgtttagta gtttagggcc actgtttttt
    12541 tcagctattt gggcatttac tcgcccacgt tggatttacc ctaaacaagg tagtgcggtg
    12601 aaatatgcct tatttggtgg cttaacgacc gtgataaact acttgattac cctttttatt
    12661 ttttatattc tgacgttata acgtcatact aaggagaatt tatgagcaaa atcgcattag
    12721 ttacaggggc aacccgtgga atcggcaaag cgattgccga agaattggta gcaaaaggct
    12781 acatcgtagt cggcaccgca acctctgaaa aaggggcgga atctatttca gcttatttag
    12841 gcgagaacgg caaaggctta gtgctaaatg ttgccgatgc agagtcgatt gagagcgtat
    12901 taaagcagat caaagagacc tttggcgatg tggacgtgtt agtcaataac gccggcatta
    12961 cccgtgacgg cttattaatg cgtatgaaag atgaggattg gttcgacatc attcaaacta
    13021 acttaacttc ggtttatcgt ttatccaaag cggtattacg cccgatgatg aaaaaaggcg
    13081 gacgcattat cacgatcggt tctgtggtcg gctcaatggg caacccgggg caaaccaact
    13141 actgtgctgc caaagcaggc ttagttggtt tttctaaatc tttagcgaaa gaagtagcaa
    13201 gccgcggcat tacggtaaac gtggttgctc cgggctttat cgccactgat atgaccgatg
    13261 agctaaccga agatcagaaa aatgcgattt taagccaaat tcctgccggt gaactcggtt
    13321 ctccacaaga tattgccaaa gcagtcgctt tcttagccag cgatgatgcc cgttatatca
    13381 acggtgaaac cattcacgtt aatggcggtt tatatatgag ctaatccgct acaagcggtc
    13441 ttttttcaac cgagctttgt aaattcagag ttcggttttg ttatttgtta ttttgtgtta
    13501 tcacctgctt tataggtata ggtgaaaaag tgtgaatatg ttatgactag aaatacatta
    13561 gtagtaggct ttttattgtt tgctattttc tttggtgccg gcaatctgat tttcccacca
    13621 aaattaggtt atgaaagtag tacagaattt ttctcagcca tttcaggctt tgttttaact
    13681 ggagtagggc ttcctctact cggtattatc gtcagtgcat tttataatgg aggctataaa
    13741 tctgcattag acaaaatcca cccttggttt tctttagcat tcctaacttc tatctattta
    13801 gcgatcggtc cattctttgc cggtccgcgc acggcagcaa ctgcctatga aatggcgata
    13861 atgccgtttt taggggattc cagccaagtg tcaatgttaa tttttacctt aatttacttt
    13921 gcctttaccc tatggttagc gctaaatcca aataaaatgg ttgatcgcat tggtgcaatt
    13981 cttaccccga tcttgcttat aaccatcatt ggattagtta ttcgagccgg ctttatttta
    14041 gataccgatc cacaaatcac tacgcctaat acgaatgaac aatcttactt ttttaaaggt
    14101 atggttgatg gctatctaac tatggatgca cttgcttcgt tagcctattc ggtaattgta
    14161 ttaaatgcta ttcgtgggaa aggggtaagc caagccgcat tacaacgcca aacagtttct
    14221 gccggcttag ttgcagcagt tgctctagct gtaatttata tttcattggg ttggattggt
    14281 aataatatgc caattagtgc aaacacactt tcgatgttat cagaaagaaa attggatcta
    14341 ggtacttaca ttcttaacac tgtgactacc caagccttcg gtgaactcgg acgtagtgtc
    14401 ttaggagtga ttgtttcact tgcctgttta accactgctg tcggtttagc cgtatcagtc
    14461 agtgaatact ttaatgaaat tttcccgaaa atttcatata aagtttatgc tatcttattt
    14521 actgtgatta gttttactgt tgctaaccaa ggattaaaag aagttattag caaatccatt
    14581 ccggtattat tagttctcta cccaatagca atgactgtca ttttaatgtt gctgattaat
    14641 ttagtgatta aacttccgtt gtctgcacaa cgtctatcac tcctattagt gacaattgta
    14701 gcgatagctt cagttgccgg tgtcgggttt accgaaaact tgcctctaaa atcctactcg
    14761 atggaatggc tacctttcgc tatcattgga gctattattg gagcaattat ccacccgctt
    14821 accggtcgaa agcataaata aagtaaaggc agtgagcatt cactgcctct tttttaggag
    14881 agaataatgc ctgaattacc cgaagttgaa accagcgttc gtggtgtatc gccctatttg
    14941 gttgggcaaa ctattgaaca aatcatcgtt cgtcagccaa agttacgttg gacggtgagt
    15001 cctgaattaa gccaaatggc aggggcaaaa attaccgcag tagaaagacg tgccaaatat
    15061 ctgattatcc gcaccgacaa aggcgatatt ttggtgcatc tgggaatgtc cggctcgctc
    15121 gggattttgc aagaacgtca acaaaaagaa attggcaaac acgaccacgt cgatcttatt
    15181 acccaaaacg gcacaatttt acgctataac gaccctcgca aattcggctg ttggctatgg
    15241 gcagaaaaag cagaagatca cgaactgttg cgtaaactcg ggcctgaacc gctttcaaac
    15301 gatttcacag cagattactt atttgcaaaa agccgcaaaa aaacgaccgc ttgtaaaacc
    15361 tttattatga ccaatgaagt ggttgttggg gtggggaata tctatgcgtg cgaaagttta
    15421 tttatggcag gcattcaccc tgagcttgca gcacaaaacc tgactaaaaa acagtgcgaa
    15481 cgtttagtaa aaaccatcaa agaagtgctg actaaagcga ttattcaagg cggcacaaca
    15541 ctgaaagatt ttatccaacc tgacggcaaa ccaggctatt ttgctcaagt gttgcaagtg
    15601 tatggaagaa aaggggaaac ctgtaatgac tgcggaaagc cgattgaaac taaagtaatc
    15661 gggcaacgta atacctattt ttgcccgaag tgtcagagat tgccgaagta atctaataat
    15721 aaactctctc cccctgaggg agagagacag cttgttgaaa cgttaagtga aacaagcaga
    15781 gagagggtaa aacctaaacc tgcaaccaaa aggtaacagg cccgtcattt tgtaggctga
    15841 cttgcatatc ggctgcaaat tgcccggttt gggtatgaat cttagtggcg gcttgttgat
    15901 gaaagtaggc atacaaacgt tcggcatcaa ccgggcttgc tccttttgag aaactaggac
    15961 gcaagccttt attggtatcc gccgcaaggg taaactgtga aaccactaac aaactgccac
    16021 ctgcttgctg tacgtttaag ttcattttcc cctcgctatc cgaaaacacc cgataattca
    16081 gcactttttc cagtagctta tctgctttcg cttcatcatc gtctttttcc acaccgagca
    16141 gcaccaacaa accgcttgca atttcgccaa cgacttgccc ttcaacctcc acttttgcga
    16201 atttaacccg ctgaattaag cctatcatta atgctcccct tgtctgtttc catttcgtct
    16261 aaaaccgccg caaattgccc gccaagtaat accacctgcc aacttaactg aatccataac
    16321 agcataatcg gtaacaccgc taatgctcca taaattgcct gataagacgg gaaggcagta
    16381 atataccaaa taaaggcttt cttccctaaa gtaaagaaaa tcgctgccat taatgccccg
    16441 atagcagcgt gttgaaattt tacctttcta attggaataa atttatacac taaggtaaaa
    16501 agtagccaaa ttagcaaaaa cggcatcaat tctaataaat gctgcccgag cgataacgct
    16561 ccatttccat taaaaataga aagcgacatt acataggtgc taatcgcaat gctagcaccg
    16621 gcaagcagcg ggccaaacag caaaatgaga aagtaaagca agaaagagaa ccacatcgga
    16681 cgctgacgat tatcgtgcca aatggtattc aatgcctcat caatactctt aatcagcata
    16741 atagtaacca caaataagcc gataaaactt accagcccca tttgtttggc attactgaca
    16801 aacaactcaa tgtattccga caccatctcg ctcgcactcg gggcaaagtt gtcataaatg
    16861 aacgctttta actgctcgtt tgcttcgtgg aaaatcggaa aaaaggtaaa aatggaaaac
    16921 agcacgacaa taaacggcac tatcgccagc attgtgctat aagtgagata accggctgaa
    16981 atcgcaatgt tattttcatt gtaacgcttg gcaaagagct taataaatct ccacagtcga
    17041 tttaacatct taacctctca ccaaataatc gccttcacac acccatttgt aggtggttaa
    17101 ggcttctaat cccatcgggc ctcgtgcgtg taatttctgc gtgctaactg ccacttctgc
    17161 ccctaaacca aactcaccac catcggtaaa acgggtgctg gcattaatat aaaccgccgc
    17221 ggcatcaacc tgttgtacaa attgacgggc aagttgataa tcggaggtta aaatcccctc
    17281 tgaatgctgc gaaccataat ggcggatatg ctctaccgct tgttgcaggt cattcaccac
    17341 caccacgtta agatcaagcg ataaccactc ttggctcaat tttgcttgat caagcggttc
    17401 aattccttca attttttgca aatcgttact gtgaatagta acgccaagct gttgcatttt
    17461 ggcgaccaat ttcggcaaaa attccaccgc aatcgctttt tccaccaaca gcgtttccag
    17521 cgtattgcaa gtgcttgggc gttgcgtttt ggcattagcg atgacctcta gagatttctc
    17581 ctgatccgct gttttttcca caaacagatg acaaacccca atccccccca caatcaccgg
    17641 aatggtcgaa ttttctttac agaattgatg taaacctgca ccgcctcgag ggatcaccat
    17701 atcaatgtag cgatctagct tcaatagttc caataataag gctcgatccg gatccgtcac
    17761 cgcttgcact gccaatttcg gcaagccggc tttttctaac gcatcttgca ctacatcaac
    17821 caacacagca ttggtaaatt tggtctcttt accgccacgc aaaatcactg cattgccggt
    17881 ttttaggcat aatgatgcca catcaatggt cacattcggg cgagcttcgt aaatggttaa
    17941 aatcaccccg agcggcacac gctggcgttc gattttcaaa ccgctgtcta acacgccacc
    18001 gtccatcacc tgccccaccg gatccgctaa tttggcaaca tttcgcacat cgttagcaat
    18061 gtcttttagc cgatcttcat tcaataataa gcggtcaata atcgccaatg aaatcccttg
    18121 tgcttgagca aattcaatat ctttggcatt agcgtataaa atttcttctg cacgttgctc
    18181 aaggctatcg gcaatcgtga gtaaggcttg gtttttctgt aggttgccaa attgagccag
    18241 ctcaaaacta gcttgtttgg cttgctgggc aagttctatc atctgcataa attaggtctc
    18301 atttaatcaa tattctccat aatctaacac gttcttttat gtgaagaaat atgcaaaagc
    18361 caagaaaatt ggataaaatg ggggaatttt aaaacattac gcaattcccc tctccctgat
    18421 ttttctcctg aacggagaaa aatctatccc tctcctacaa ggggagaggg tagaatttaa
    18481 ctctctcccc ttgtgggaga gagaccgcct acagattcgt tcagaatctg taggcagaga
    18541 gaggggtaaa aacagataaa acttaaacaa aatgataaac actaccccta aacagctaat
    18601 ccacattctt ccgcctcaac tggcaaacca aattgctgcc ggcgaggtgg tggaacgccc
    18661 tgcgtctgtg gtaaaggagc tagtggaaaa cagtttagat gccggagcca atactattca
    18721 aatcgacatt gaaaaaggcg gctctcagct tatccgcatt cgagataacg gttgtggtat
    18781 cagcaagcaa gatttaccgc tggcacttgc tcgccacgct acgagcaaaa tcagcagctt
    18841 ggaagattta gaagccattt taagtttagg ctttcggggc gaagcattgg caagtatcag
    18901 ctcggtttca cgtttaacac tgacctctcg taccgcagag caaaccgaag catggcaagc
    18961 ctatgcacaa gggcgggaaa tggcggtgga aattcagcct gcctcacacc cgattggcac
    19021 aaccattgaa gtagcaaatc tgttttttaa cacaccggca cggcgtaaat ttctacgcac
    19081 cgataaaacc gaatttgccc atattgacga ggtggttcgc cgcattgccc ttgccaagcc
    19141 gaatatcagt ttcagcttaa gccataatgg taaaatcgtc cgccaatatc gcaaagtgca
    19201 agacaattcg gtagagcagc aacaaaaacg ggttgcagcc atttgcggtg atgagtttat
    19261 tcaacattca acttatattg acaggcaaca cggggatctg cacctacacg gctgggttgg
    19321 ctcaccggct cttgcccgtc tgcaaaacga cctttgctac agctatgtga acgggcgaat
    19381 gatgcgggat aaaaccatca atcacgccat tcgccaagcc tacggcgaca gcattgcaag
    19441 tggttactat ccggcttttg tgatcttttt ggatttagat ccgacaatgg ttgatgtaaa
    19501 cgttcacccg gctaaacacg aggtgcgctt tcatcaagga agactggtac acgactttat
    19561 tttgcaaggc gtactcaaca gcctgcaaca aacccaacct acgcttgaac tgcgaaatga
    19621 agtgaacgag ccgttaccga gctatgttca agacactaac cgccaagctg cggggcaaaa
    19681 tatttttgtg tcgcaaaccg ctccacaagc ggccgaattt acgcaaaaaa atgcaagtcg
    19741 atcaagctat acgcctaaat ttgaacgaag caacagtgtg agttcgtccg ctcaaaaatg
    19801 gtataaggaa ttggttggtg gcgatttgca ccaaacaacg ccaactatca aaacgcaaag
    19861 cacgcttgtt gagccaaaaa cagaacccca aactgaacat aaaacagaag ccgtttcgca
    19921 aaaaattacg caaattgcac cgcttgcaag ccaccattca caagccttag cgattgtaaa
    19981 aaaccaagcg gtgttaatta aagaagagga aaatttttac ctgcttccac tggcaacatt
    20041 agccgagctt aaactcaagc tacaactgga aaaagggcaa tctcaagcgt tgttgatccc
    20101 actgaatctc agtttagatc aacaacaaac cgaacgctgg caacaaacca aagaagaact
    20161 aactaagctt ggcttttcga tcagcgaaaa acagtggcaa gcccaaacac ggctcacagt
    20221 gctttccgta ccacaggctg tcagagaaca aaacctgcaa cagcttttat ttgctctgtt
    20281 caaccaaaca caagcggtca atttagccga attttttgca aaaaaatgcg aaaaacccac
    20341 cgcttgtacg ctaagtgacg tgattgctct actctcagaa attgagcttt atgccaatgg
    20401 gaaaaaagag ctggagggaa taaggaagga agtggatttt tccaagtttt tatagtctaa
    20461 agggcaatac cctttagcca aataaatgag agtggctgcc aattcgcagc agctctagct
    20521 tatcatcttc cacttttcga tagataagaa ccaaatcagg ttggatatgg caatccctaa
    20581 agcctttcca ttcgccggtt aaagcgtgat cgcagtattt ctcaggtaat ggcttgtcat
    20641 taatcagaaa atacaacgcc tcaattaatg aagaggataa agactcaacc gcacattttt
    20701 tatagtcacg tttaaaagca ttactatact caatctctcg cattgagttg ctccattaaa
    20761 tccgcaatac tatttgctga atgtagcttt tcctcgccat tcttaacagc ccttaatact
    20821 tctgctgtct caaaattagg ctgataatca aactgaaaac gtttttctgt tgcgattttc
    20881 gctaatgtca ttcgcatcac atcagagaca gtcaagccga taccggctaa cacctcactt
    20941 gcttgctctt taatttcagg gctgattctt acgcttacta atgcactatt tgccatcaaa
    21001 aactcctttt gtatatcaaa tgatatacaa aataacattt aacaaaaaat tgtgcaataa
    21061 aaaagaaatt caaagaaaag aaatgaatag ttaaaattag ctcgttacaa gaaatcattg
    21121 agttactcaa gaaatcaagg taatataaag aagtctgggc ggaacacgaa cccgccccta
    21181 gcatctagcc gcttacaaga acagatagat tagttgaaag agcgtgaaaa tttcaactgc
    21241 tgcacacaga aacccaagtg caactaaaat caatagtagt tctttcattg taagcctcct
    21301 tagtgctact aaggatgatt taggctcagg ctactgcgaa tagccctaac gagcctacca
    21361 gtagcacaat caggattgta acaaaaaagc tgtgaatttc acggcttttt ttgtatctat
    21421 atacagtata ttaatatgaa taaaaaaccc cttgcccttt ttttaatggg gccgactgcc
    21481 tccgggaaaa ccgatttagc tattgcttta cgccaagaat tgccggttga ggtaatcagt
    21541 gttgattctg ccttaattta caaaggaatg gatattggca cggcaaagcc aagcaaggaa
    21601 gagcttgccc ttgcaccgca tcgcttgatt gatattttag accctgccga gagctattcg
    21661 gcgatgaatt tccacgctga tgcgttgcgt gaaatggcag atattacctc acagggtaaa
    21721 attccgctct tggtgggtgg cacaatgctt tattacaagg cattgcttga agggttatct
    21781 cccctgccct ctgccgatcc agccattcgg gctgaaatcg aaagccgagc ggcacaacac
    21841 ggctgggcaa cattgcatca agaattagtg aaaatcgacc cgattgccgg tgcaagaatt
    21901 aacccaaatg acagccaacg gatcaaccga gcgttagaag ttttttacat taccggcaaa
    21961 acgatgaccg aactcactgc tcagcaaggt gaggctctac cttataatat cttacaattt
    22021 gcaatcgctc ctcaagatcg tgcagttcta caccaacgga ttgaacaacg ctttcacaaa
    22081 atgattgagc taggctttga agaggaggtc aagcggttat ttttacgcaa agatttgcat
    22141 attaatttgc cctcgattcg ctgtgtgggc taccgccaaa tgtgggaata tttgcaaggc
    22201 gatatttcgc tcgatgaggc gatctttaaa ggcatttgtg ccacccgcca gctggcaaaa
    22261 cggcagatta cttggctgcg tggctggcaa ggcgaactga cttggttaga tagtttagct
    22321 ccgaccagtt ctaaagcaaa aatggtggaa aagatcgatc attatttaaa gaattgtgat
    22381 aatatctaaa cgcctttggc acttatcgca ttatttggtg tcttaaaaat cacacaacta
    22441 taaaaaggaa aataacaatg gcaaaaggtc aatctttaca agatccatat ttgaatgcac
    22501 ttcgtcgtga gcgtattcct gtttcaattt atttagttaa cggcattaaa ttacaaggtc
    22561 agatcgagtc gttcgaccaa tttgtgattt tattaaaaaa cactgtaagc caaatggtgt
    22621 ataaacacgc tatttcaacg gttgttcctg cccgtgcgtt atcgcataac aataacaacc
    22681 aagcccaaca cgctcagcct gctgccgaag taactgaaca agcggaataa taacattatt
    22741 actcaaccaa tgttaaacga atcattgcca aactcagaag aaaattctgc gtttggcttt
    22801 gctttatctg aagcaagcca aactacagaa gccgcctcgc ctaccgatcc agaaaatcaa
    22861 gataaagcca ttttggtgca tctctatctc gggcaacata aagatgttga aaatttgctg
    22921 gaatttaaaa cgctggcaga atctgccggt gtcgaagtgc tggcaacgct taccaccagc
    22981 cgccaaagtt cgcatatcaa atattatgtg gggcaaggca aagcggaggg aattgccgaa
    23041 gcggtagaac gactcggggc aacagtagtg ctggtgaacc atcaacttag cccggctcag
    23101 acccgtaatt tgcaatcgtt atgcggctgc cgtgtggtgg atagaaccgg cttgattttg
    23161 gatattttcg ctcaacgggc aagatcgcac gaaggcaaac tacaagtcga gctggcacaa
    23221 cttcgccatt tatcgacccg tttggttcgc cgagttacta atcaagacca acaaaaaggc
    23281 ggagcagttg gcttgcgtgg tccaggtgaa acacagctcg aaaccgatcg ccgtttgatt
    23341 aaagtgcgaa tccaacagtt actcaaccgc ttggaaaaag tcagcaagca acgcaatcaa
    23401 aatcgaaaaa ccagacaaaa agccgatatt ccaacagtat ccttagtggg ctataccaat
    23461 gccggcaaat ctaccctgtt taatgcgatt acccaagctg gtgtttatgc tgccgatcaa
    23521 ctttttgcga cccttgaccc gactttacgc cggattcagg tgcaagatgt cggcacgaca
    23581 attcttgccg atacggtagg ttttatccgt tttctaccgc acgatttagt ttcagccttt
    23641 aaatctaccc tgcaagaaac caccgaagct actttactgc tccacgtcat tgacggctca
    23701 gacgaacgca aaaacgaaaa tattgatgcg gtaaatcaag tgttggacga aatcggagcg
    23761 ttagatattc ctactttatt ggtattcaat aaaattgata aattagaagg tgtagaaccg
    23821 catattgaac gcaatgccga tggcacgcca gttgccgtgt atctttccgc ccaagaaaat
    23881 agcggcattg agctgttatt ccaagccatt caagaaaggc ttcgcagtaa cttagtgtgt
    23941 gaaaacttgc tcctcccggt tactgccggt gcaatttacg cacaatttaa agcagaaaac
    24001 tgcattaaaa ccgagcattt taatgagttc ggtgaacgga ttatctctat tgaaattaac
    24061 gaagtgcaat ggaacaaatg ggtgaaacaa tttccggatc tagccgaata tattgagctg
    24121 gcaaaatggg ggtaattaat ctcacttctg agtaagttat atttaaatta tgcaagcggt
    24181 caattcttta cgtttttttg caaaaaagtg taaagaattg accgcttgtt ttatccatta
    24241 aatccaattt agccaataaa aaaatccctc aaataaacca gatttccccg ttctatttga
    24301 aggattttat ttattcttcc ccaaaagtgg ggaagaaaag cttaatcaag cagttactac
    24361 cactgataac ctacgcttgc agcagcacct gtatcaccac ggctgttaga gttaacactg
    24421 aatttgatac ccactttacc attatctgat aaacgagaat aacctacagc aatagctcct
    24481 tgaccacggt aagcacctac accggctgaa accatcgatt taccaggttg tgttacgtga
    24541 tataaattac ctgcggctaa tgcacctgca atacctgcac gtaagtcttt atctacgtta
    24601 ctgatacgat tgttcagacg attttctgca cctttcaact gattcacatt aacagcatca
    24661 gtgcctttca cacccggagc aacgttcgta atacgtgttt gcgcattctt gctacctgca
    24721 atgttaagct catttacgcc atcttttgca acagttgaac tgatagttgt accaccaact
    24781 ttcactgaat caaattcaag attgcttgag gttgccactt caacagttga acctttacgt
    24841 gaaacaacga tgtttttgcc acctgaaacg gccactttac cattgttatt aacacgttga
    24901 gcacctttct ctgaagtttc agctacatta ccatcaacag tgagatacca gcctgtattc
    24961 tgcattgcat tatacaactg gctaccgctc acaacatctt tacttgttgc cgttacatca
    25021 ccatctttaa cgttagtgat cttcgtgcct ttcgcatcaa taccgccttt agttacactt
    25081 gggccgtctt taatggttaa accattgtta tttacggttg tgtcgccagt tgttacagaa
    25141 ccatcttccg ttaaatcaat tgctttcgct aattgtacct ctaatgtgtc tgtaccattc
    25201 gctttcacat tgatgttgcc tgatgctgac ttaaagtttt cagaagctgt tttatccaca
    25261 ccttcacctt tcactttaac ttcagtattc agtttctgac ggttcttcac atcttcattg
    25321 ttaccagaga agattaaacc atcatttaag gttgcaactt gttctgtgac agttttaccg
    25381 tctttatctt tggtctcata aacgatacga gtcttaccgt tctcacccgg taatccatct
    25441 ttaccatttg taccatcaac accttcagca ccatctttca ctgcaatatt tgcacttgca
    25501 ccatctttac cgtcagcgcc tttcggaccg gttaagccga tagagccatc tttaccgttt
    25561 aatacaacag aagcgccatc tttacctgta gctccaattg aaccatcaac accgtcttta
    25621 ccgtcacggc ctgcagtaat tgtgccgtca cctttaatgg ttacgccatc tttaccgtct
    25681 ttgccagcaa taccgatttg accgtcttta ccatctttac caccaatggt taagttgttt
    25741 ttcaagccga aggtcacgtt attaccttct ttagtaataa taatgttacc gtctttgttg
    25801 tttagatcaa ctgttgctcc tggtttaacg ttgcctttgt ctttaccatt tgctgttaag
    25861 ttccaacctg cgttagcaac ttcttgcact tgatataact ggctaccatt taccgcatct
    25921 ttgctggttg cagaaatttc accgtcttga acgttaatga ttttcttatc gcctgcattg
    25981 ataccggctt tagttacact tgggccatct ttgatagtta aaccatcatt atttaccgta
    26041 gtatcaccaa tagttacaga accatctttc gttaaatcaa tgtctttcgc taatttaact
    26101 gttaacgcac cattgttgtt tacaacaccg atattgttat cggacaggtt cgttaaatca
    26161 gtatcaccgc ctgagatttt taacgtctca ttaagtttct taacgatttc tttaccgtca
    26221 tcacctacga atcttaagcc atcgttcagt gttgcaactt cctcagttgt accgtctggt
    26281 ttctcataaa cgatacgggt tttgctttcg ccatctttac cgtcgttacc gtcaaggcct
    26341 ttagcaccgt cttttacaga gatagttgca cttgcaccat ctttaccgtc agcgcctttc
    26401 ggaccggtta agccgataga gccatcttta ccgtttaaag taacaccaac tgtaccatct
    26461 gcacctttaa caccgattga accatcttta cctggaccgc caatggtaaa atcgttattt
    26521 aacgtaaagt caatcacatt atcacttact gttgtgatga tgtttttgtc tttagaggtg
    26581 tacttaacag tttcacctag tttaacgtga tcagtttcac cattatccgc tgcaatgcta
    26641 aagcctttct cgataatatc gttgcttgca tttacaacat cattaatatt cgcagcgtta
    26701 gtaccaactt cttttaattg atcgtctgtt aagtcgttca ctgaagtgat tggcttacca
    26761 tctttaccgt taatgccgtc tttacctgct aaaccgtcaa taccgctctt cacgttaaca
    26821 atttggttgc cgccattgtc tagaccgtct tcagtaagct taactgcttt accatctgtg
    26881 ccatcttttg gcgtgatagt tacgccatta ttatttacta ctgttgttgg acctttacct
    26941 tcttgaccat tctctccatc ttgtggtttg aatgtagctg agttcaagtc tttaagatct
    27001 ttagctaatt gaacagataa tttaccatct ttgctgttta cgccgatgtt atttgcagtt
    27061 agcttatctt tatcagctcc accaatgatt tctaaggttt cattcaattt cttagatact
    27121 agtgttgcat catcaccttt aaagtgtaaa ccatcattta aagtagctac ttgctctggt
    27181 tcacctatag gatcaccatt gccatctgtt ggctgatatt ggatacgagt tacaccatct
    27241 ttacctggta aaccatcttt accaacaagc cctggtttgc cctcagtacc tttaatggtt
    27301 aaaccatctt taccatttgt accgttcaag ccgattgaac catctttacc gttaagaaca
    27361 actgcagaac cgtctttacc gtttacaccg atagtaccat caataccatc tttgccaggg
    27421 cgacctacag tgatagctcc atctttacca tctaaagcaa tagcatcttt accgtcttta
    27481 ccagcaatac caactttacc tggttcacca tctttaccaa cagtaatatt attcactagg
    27541 ctaacttcta atgcatggcc accatctttc tcaacaacgt ttgttttaac attgccatca
    27601 ccaatgatct tagctgtcgt acctaagttt tgcttaaact ccttgttgtt ctcatctttt
    27661 agaccaaacg catctgttgt cacctcagta acagtctcag taacagtatt tttcaagtca
    27721 ccgacgttaa ccgcattgtt aagaacatca cctgctgcct cagtaagttt aacaggttga
    27781 ccatctttac cttttaagcc gctatcaaca ttggtgattt ggttaccacc gttgcttaag
    27841 ccatcctctg ttaaggtaac attagattta gttgcatcat taggatcttt cttagcaatc
    27901 gttacaccat ctttattgat aactgtagaa tcaccttgtg tgccgaatgt tgcactatct
    27961 aagcctgcta gatcttttgc taacgccaca gtaatggtat tgccaacaac ctgtgtcatg
    28021 atatttttac cagcatcaaa cttagcccaa tcagtgtttg ttgtagcacc tttaatatcc
    28081 acctgcgtat ttaatttcgc atcgtgaact ttgccatcat tcgcaccgaa ttttaagcca
    28141 tcgttaagtg ttgcaacttc ttctttatca ccatttggtt tttcgtaaac aatacgagtt
    28201 ttgctttcgc cgtctttacc gtcgttgccg tcaagacctt tagcaccttt ctcaacttta
    28261 attgatgctt taccatcttt tccatctttt ccatttacgc catcaacgcc gtggaatacg
    28321 atggcttctg gtttaattgt tacaccatct ttaccatcag cacctttaac accaactgaa
    28381 ccatctttac ctggtttacc accaacagag atgttatcgg ataagccaaa atcgatggta
    28441 ttatttgtta cggttgtaac aacattctta tcggttgagg tgtacttaac agtttcacct
    28501 aacttcacat tgtcttcttt agcaccacct cctaagccag agtgatccgc tgtaatgtta
    28561 aagccagttt taactaaagt gtcagctact gcgtaaagtt gtgaaccgtt aatcgcatct
    28621 gttgaattgg aagcaatttt acccggtgca acaaacttaa tttggcgagc attggttgca
    28681 ttacccacac tcacataatc accatcaaca acattttcat cgccagcaaa gctgctatat
    28741 tttaatgtgc caacagttgc agtatcttct ttagttgcgg ttgcttcagt agagtcagaa
    28801 cctagaatta cagaaccctt tgtcttaaca gtaacattag aacctaatac gaaagtatct
    28861 ttacctgaaa ctgtattgtt ataacctaaa gccgcagcac gaatacccga aacagtacta
    28921 tttacaccgg ctgcaattga gtttttaccc tttgcggttg agttgtaagc aatagcagtt
    28981 gcataattac cttttgattt ggcctcaaaa ccaattgctg tgccaccttc atgcgtaata
    29041 ttggcacgtg tacctactgc tgtcgcattc gccttactta cattagcact ataacctatc
    29101 gcaacagaat tattaccact tgaattagcc gtatcaccaa ttgccattgc accatctttg
    29161 ctcgcgttag aatgcgaacc aatactgatc actttttctg catgagagtt tgcattccaa
    29221 ccaatgctaa tagcattact tttccaggct ttagaagcat taccaaaagc aatcgcaccg
    29281 attcctgttg tattcgaatt tacaccaaag gcgatagaac catcacctgt tgcacttgca
    29341 tttgttgaaa acgccaaagt atcattcgaa tttgcacgag tattcgtacc caaagcaaat
    29401 gcattatttg ctactttcgc tgtatcagga ttaattacct gtcctaattc agaaatattt
    29461 gaattctcta atttaaagcc accggaccaa gcgttagtac caatggcaaa tgaatggtta
    29521 ccattagttt tcgctttagt accgattgag aatgcatctg ttccaaatgc taaagtatta
    29581 ttttgcccat cataaattga acgtctattt tcatgaccgt aacttccatc cactgtctgt
    29641 ggagtaccac taccaatcgc aaaagaacgg tcacctagcg ctgtagccga agcaccaatg
    29701 gcgaagctag ctgtagcatt tgcccaagat gttgaaccaa ttgcagtaga ataatctgca
    29761 attgcagcag attgacgcat tgcagcaaat gagttaaatc cttccgcacg tgcagaggta
    29821 cctaatgcta cagaaccaat acttgcagta cgagaaaaag aaccaattgc aatagacaat
    29881 ccccctccag aatatgaata atcaccaatg gctatgcctg acgctttcgg ttttcctcta
    29941 ctttttctgt tattgtctaa agctacagca ttgtgtccaa ttacaattgc tgaggtagta
    30001 ttagacttat acaataatct agaatccttc tccttattaa cagagttatt agattcttga
    30061 agcttagttc tgtctgcata ggataagcta cctgggttaa agtagttata tggattcgta
    30121 atagaatctg tagccaaact agtgtttgta taaatatcta taccaccatt aacaactttt
    30181 tttggtgctt tttgttgtac ttctattcta tcaataatca ccgccgcttc tgccggtgta
    30241 gcagaaagca taaaggctgc cattccactg ataagggttg ctccccctag aatgctagcc
    30301 gctgctaatt taatagtacc gcgcttatca gtagaagaag cggctttacc ttgcgatcga
    30361 gcaagttcag acacaacttc cattttttgc gtcgtttggt taaaaataac cttaaatatt
    30421 ttgttcataa ttttatacct ttagaattat tataaagctt acttcgtaaa taattcggca
    30481 attacaaccc accgaataaa caaccttact actcttaatt tagtaagagg aaagtcatat
    30541 cgataatagt aagattttca cttcaaaagt gaaacaagct tttcacttct ttacaattct
    30601 cttattatca agataataaa attaacaaaa ccccttataa atcaaacaaa tacacagtaa
    30661 atatacttaa tttacaaata a
//
LOCUS       DANLXD010000017        29951 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.017, whole genome shotgun sequence.
ACCESSION   DANLXD010000017 DANLXD010000000
VERSION     DANLXD010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 29951)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29951)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29951
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.017"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            51..1364
                     /gene="pilQ"
                     /locus_tag="PXD18_000614"
     CDS             51..1364
                     /gene="pilQ"
                     /locus_tag="PXD18_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HDL6301075.1"
                     /translation="MWRIFIYFLCGFSLAYANTISIVLKNAPTSLIFTYLAEETGKNM
                     VLDDNIETKSTLRLENKSVDEIFKTLGKVNKLSLTQEDDIVYIHKKEEKAADLTPLPI
                     MNLQNNGQNTPLVTAPKLITKTLKLHYAKASEVIESLTKGSGTFLSENGYIHFDERSN
                     SLIVKDSAKSLKNIENLVKQLDQPTEQIAIEARIVTISSEHLQELGVRWGIFSRGAGH
                     YKFGGRLEGNGLNNVTNNLNVNFPITGGASAVLQVSSINSRVLDLELSALEQENSVEI
                     IASPRLLTTNKKPASIKQGTEIPYVMYNTKSEATDVEFKEAVLGLEVVPHLSTQNQIL
                     LDLIVTQNSPNSQSGSSGLITIDKQELNTQVFAKHGETIVLGGIFQHLTQKGEDKVPI
                     LGSIPFIKRLFSQTRDKISKRELVIFVTPYILQSNEKSSNRKKSK"
     gene            1445..1858
                     /gene="nusB"
                     /locus_tag="PXD18_000615"
     CDS             1445..1858
                     /gene="nusB"
                     /locus_tag="PXD18_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HDL6301076.1"
                     /translation="MKISPRRRARECAVQAIYSWYISQNTVEEVELAFVTDQDMKGVD
                     MPYFRKLFRGVVDNVEAIDEALRPYLDRKESDVDPIERSILRLSTYELKFEHDVPFRV
                     VINEGIEVAKVFGSDDSHKYINGILDKLAPALGRK"
     gene            1921..2901
                     /gene="thiL"
                     /locus_tag="PXD18_000616"
     CDS             1921..2901
                     /gene="thiL"
                     /locus_tag="PXD18_000616"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HDL6301077.1"
                     /translation="MGEFDIIERYFNASQRPPRKDVLLSIGDDCALTSLKPNQQLAIT
                     TDTLVCGTHFLPTISPADLAYKSVASNLSDLAAMGAEPAWISLALTLPEINHDWLAEF
                     SEHFFEILDHYNVDLIGGDTTCGPLSLTITAQGIVPQDRGLFRHNAKVGDWIYVSGTL
                     GDSAGGLQLLLNQQSEQVNWNKEQSYLIQRHLRPTPRVLLGLTIASIANAAIDISDGL
                     LSDLSHILKRSDCGAVLNLENFPLSDVLLSCYSRTEAEYFALNGGEDYELCFTVPNDN
                     KAKLDKALANIGVTYTCIGQIRSAKEGLTLLRHNQPVTLPSQRGYDHFKK"
     gene            2906..3379
                     /locus_tag="PXD18_000617"
     CDS             2906..3379
                     /locus_tag="PXD18_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HDL6301078.1"
                     /translation="MKPINLKNPIHFFAFGFGSGLLKPAPGTWGSLAGLIVAIALWSI
                     TQSALFFGLLTLVSFIAGCVICTKASQDLEVHDDGRIVWDEIVAIFLMFTCLPEYNLL
                     GYLLAFISFRIFDILKPFPIRYFDEKLESGLGIMFDDILAAIFALISLHLLYYFI"
     gene            3386..4009
                     /locus_tag="PXD18_000618"
     CDS             3386..4009
                     /locus_tag="PXD18_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HDL6301079.1"
                     /translation="MLTILFIHFAGLISPGPDFFYVVRQSASHSVKSGVLAATGISIG
                     IIFWAAFAIFGLAWLSNSIGSLFQYAIMIIGGCYLVYIGSQMVRVTENIIFVENKAQL
                     TPLNPWQEIKKGLLINIFNAKAGVYFTSVISAYVDNLSNTLQMFELLLLFVVSTFIYF
                     CVVALLFSRRPVRLFYAKYSRYIDNISGVIFILFGSMLIYEGFSHFI"
     gene            4121..4726
                     /gene="ruvA"
                     /locus_tag="PXD18_000619"
     CDS             4121..4726
                     /gene="ruvA"
                     /locus_tag="PXD18_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005686751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HDL6301080.1"
                     /translation="MIGRLHGKIIEKQPPEILLDVQGVGYELLLPMTSFYSLPQIGEE
                     ATIFTHLVVREDAHLLFGFAQKQDRTLFRELIKTNGVGPKLALAILSAMSVSQFATAI
                     ENEELAKLTKIPGIGRKTAERLLVELKGKFKGMAQSDFFVEVSHEQIVASNTPDPANE
                     ALDALIALGYKPADAEKMIKKVNKSGATSEQLIREALKNSL"
     gene            4863..5867
                     /gene="ruvB"
                     /locus_tag="PXD18_000620"
     CDS             4863..5867
                     /gene="ruvB"
                     /locus_tag="PXD18_000620"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HDL6301081.1"
                     /translation="MIEADRIISASPKREEEVIDRAIRPKLLADYVGQPSVHDQMEIF
                     IKAAKLREEALDHLLIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAAMLT
                     NLEPYDVLFIDEIHRLSPAIEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGA
                     TTRAGSLTSPLRDRFGIVQRLEFYSVDDLTLIVKRSADCLNLNLSADGAYEVARRSRG
                     TPRIANRLLRRVRDYADVRNNGIITSDIAKQALAMLDVDSEGFDFMDIKLLQAIVERF
                     DGGPVGLDNLAAAIGEERDTIEDVLEPYLIQQGFLQRTPRGRIATSRTYAHLGITQID
                     "
     gene            complement(5966..6649)
                     /gene="artM"
                     /locus_tag="PXD18_000621"
     CDS             complement(5966..6649)
                     /gene="artM"
                     /locus_tag="PXD18_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtM"
                     /protein_id="HDL6301082.1"
                     /translation="MWWDYLVEISQGIGTSLQLTFVALIIAFILAIILTFILSLENRP
                     LKWLVNGFITLFTGTPLLIQFFLIYSGPGQFEWITESAAWVLLSDAWFCAMLALALNS
                     AAYSTLLFHGAVKAIPKGQWETCAALGLSRLDTLKILVPYALKRALPSYSNEIVLVFK
                     GTSLASTITIMDIMGYARQLYGTEYDALSIYGMAGVIYLVITGIMTIVLRKLESRVLA
                     FERFETEKA"
     gene            complement(6649..7320)
                     /gene="artQ"
                     /locus_tag="PXD18_000622"
     CDS             complement(6649..7320)
                     /gene="artQ"
                     /locus_tag="PXD18_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtQ"
                     /protein_id="HDL6301083.1"
                     /translation="MSSDILNLLVNATLMTLGIALASLLIGMLLSIFFVVLETSKIAC
                     IRKPTSIIITLLRGLPEILVVFLIYFGLIQVIFLITDEFAELNAFWCGAIALGIIFAA
                     YASQSLRGAIKAIPVGQWESGTALGLSRAQVFVRIILPQVWRHALPGLSNQWLVLLKD
                     TALVSLIGVDDLMRQSELINANTHQPFTWYGIAALIYLAITLISQRVIKVLEGRFTRF
                     ERGVA"
     gene            complement(7320..8045)
                     /locus_tag="PXD18_000623"
     CDS             complement(7320..8045)
                     /locus_tag="PXD18_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HDL6301084.1"
                     /translation="MKKLLLASAIAFATLSANAQETITFAMEPSYAPFETTNEKGEVI
                     GFDVDIAKALCEELKATCEFKTQSFDSLIAGLKFKNFDAIISGMDITEARQKQVAFTN
                     AYLENSVSYVAMKGKFTPETAKNVGVQNGTTFQQYLSKNAKQYNLKPYASLQSAVLDL
                     KNGRVDMVFGDTPVLAEWLKTEKELDFVGEKVVDKAFFGNGYGIAVNKSNTALLEKLN
                     SALATIKTNGKYEQIYNTWMAGK"
     gene            complement(8071..8805)
                     /gene="artP"
                     /locus_tag="PXD18_000624"
     CDS             complement(8071..8805)
                     /gene="artP"
                     /locus_tag="PXD18_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter ATP-binding protein
                     ArtP"
                     /protein_id="HDL6301085.1"
                     /translation="MAIRIQNVNFFYGSNQALFDINLEIEKGDTVVLLGPSGAGKSTL
                     IRTLNLMEVPQSGTLAIANHQFDLTAKTDSKAVSLLRREVGMVFQQYHLWPHLTVMQN
                     LIEAPMKVLGLSKEEAVARAKGHLARLRLSEFAERFPLHLSGGQQQRVAIARALMMQP
                     QVLLFDEPTAALDPEITAQVVDIIKELQSTGITQVIVTHEVGVARKVASKVVYMEKGT
                     IIEQGDASCFESPKTEQFAQYLSHSE"
     gene            9013..10776
                     /locus_tag="PXD18_000625"
     CDS             9013..10776
                     /locus_tag="PXD18_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HDL6301086.1"
                     /translation="MIRYFFSLVLSLLMINSSHANLFSQPKFLKSEEAFVFSIQNENE
                     TLQLNWDIADNYYLYKKEIRVTPQNIEIGDITFPAAEQYNDEFFGQVEIYRNHLGLKV
                     PFKEIKDNASIVVEYQGCTKGFCYPPERVELKLDSILSATPEELAQLEAQAVEKSENF
                     AKTDNMAPPENVAKAEQDQLAENLANNRFSIFWFFVLGVGLAFTPCVLPMLPLLSAIV
                     IGNKQRPSTAKALLLSIAYVQGMAVTYTLLGLIVAAIGLPFQIALQSPPVLIGLSIVF
                     ILLACSMFGLYEIQLPNSWQQKLNAMSQKQQGGALGSVFLMGMIAGLIASPCTSAPLS
                     GALLYVAQSGDLVTGGLALYLLALGMGLPLILITLFGNKILPKSGEWLLKVKAAFGFV
                     MLALPVFLLSRVLPSHYEPFLWSALAVAFLIWLVDAIPSNSITKKIIKVLLLLALAIA
                     AKPWADLAWNGSTTQQQTTPHLALEKIQSLADLETKLTASKGKKVMLDLYADWCVACK
                     EFEKYTFSDQNVQNKLNEMVVLQIDMTKNSAENIELMKHFNVLGLPTILFFDENGNEM
                     SQSRVTGFLDAEQFLAWLNKL"
     gene            10786..11355
                     /locus_tag="PXD18_000626"
     CDS             10786..11355
                     /locus_tag="PXD18_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005821628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P hydroxylase"
                     /protein_id="HDL6301087.1"
                     /translation="MNQENHKIEDIIRIFNQCFSDEYNTRLERGGNYPIYLPEFMDED
                     GVPSERPYNVILFAHGYYSSALHEIAHWLVAGEARRKLEDFGYWYEPDGRSAERQREF
                     ESAEIKPQAIEWVLATAAGFRYFASADNLSGNPGDNSAFKQAVYDQVKLYAERGYLPK
                     RAETLRKALCAFYGTPDVIDLAQFDIERI"
     gene            11581..13359
                     /locus_tag="PXD18_000627"
     CDS             11581..13359
                     /locus_tag="PXD18_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HDL6301088.1"
                     /translation="MSTLDFHFIHRFHQQVQALSHHPALRFMQDEKWSEISWLELQKQ
                     VNNLSYALLANGLAVQEKIAIFAQNMPRWTITDIAAMQIRAVAVPIYATSTTKQLEYI
                     LNDGDIKILFVGDQEQYDQAIEIANNCSLLIKIVAMKDSIDLRDFPIAQHWQDFIKVN
                     QDEAELTKRLNDKCLEDLFTLIYTSGTTGEPKGVMLDYANLAHQLQAHNKALPHIDEN
                     DISLSFLPLSHIFERAWVTYVLYRGAVNCYLEDPQQVRQALSTVRPTLMCAVPRFYEK
                     IYTAVWDKVQQAPIHRRALFKWAIRTAEDNLFGKKSAFFHRLQYIMADKLVLGKLRAL
                     LGGRIRMMPCGGAKLDPSIGLFFQSIGINVKLGYGMTETTATISCWQEKGFNINSTGT
                     LMPDVEVKISEENEILVRGGLVMKGYYKKPEATAQAFTAEGFLKTGDAGELDSEGNLY
                     ITDRIKELMKTSNGKYIAPQYIEGKIGKDKFIEQIAVIADAKKYVSALIVPCFDSLEE
                     YAKKLNIRYQDRLELIKHYEVVRMFEQRINELQKDLASFEQIKKFTLLSQAFSTKMEE
                     ITPTLKLRRKVILERYKQQIEKMYES"
     gene            complement(13392..13736)
                     /locus_tag="PXD18_000628"
     CDS             complement(13392..13736)
                     /locus_tag="PXD18_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDL6301089.1"
                     /translation="MIQRFEVGSRFSEMAIHNGVAYLAGQVPLDDTADAYTQTQQVLA
                     EIDKWLAKANSDKSKILMATVYLKEMADYAEMNRAWDEWVAPNNAPPRAAVEAKLANP
                     NWKVEIVVTAAV"
     gene            complement(13745..14293)
                     /locus_tag="PXD18_000629"
     CDS             complement(13745..14293)
                     /locus_tag="PXD18_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane lipoprotein lipid attachment
                     site-containing protein"
                     /protein_id="HDL6301090.1"
                     /translation="MAKLFANSTACLYLENMKKLIFLGLSALALAGCSSTISNPNQLI
                     GQWQCTIEYDDFNIRTVDNLRFSTNGTMTNQGGIYYPIQKSIFEYSLQQNGRWSVKNG
                     AIVYRIVSESVQRSHRSQIWSELQRDAELQQFEENLFSSLSDSDNNKTVELIITDFDE
                     KEMDIKQEIKGHKAYKGQCIKQ"
     gene            complement(14320..15357)
                     /locus_tag="PXD18_000630"
     CDS             complement(14320..15357)
                     /locus_tag="PXD18_000630"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HDL6301091.1"
                     /translation="MALKELDWANLGFSYIKTDYRFIAHWKDGKWNEGELTQDNTLHI
                     HEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDQNAERMQRTADRLLMPRVPTELFIR
                     ACKKVVKANQDWLGPYGSGATLYLRPFLIGVGENIGVKAAPEFIFSVFCCPVGAYFKG
                     GLAPSNFITTDYDRAAPMGTGGVKVGGNYAASLLPHELAVEQSSTTRKFADAIYLDPK
                     THTKIEEVGAANFFGITKDNKFITPISESILPSITKYSLLHLAQERLGMEAIEGDVYI
                     DQLDQFAEAGACGTAAVITPVGGIQHKDKFHVFYSETEVGPVTRRLYAELTGIQFGDV
                     EAPQGWIVKVE"
     gene            complement(15499..15825)
                     /gene="grxD"
                     /locus_tag="PXD18_000631"
     CDS             complement(15499..15825)
                     /gene="grxD"
                     /locus_tag="PXD18_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005705415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HDL6301092.1"
                     /translation="METIDKIKQQISENPILLYMKGSPKFPSCGFSARAVEAVINCQV
                     PFGYVDILTNPDIRAELPKFANWPTFPQLWVEGELVGGCDIVLEMLQKGELQTLLKET
                     AAKHAA"
     gene            complement(15897..16502)
                     /gene="recR"
                     /locus_tag="PXD18_000632"
     CDS             complement(15897..16502)
                     /gene="recR"
                     /locus_tag="PXD18_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HDL6301093.1"
                     /translation="MQTSPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVALS
                     KALNEAMSHIGHCKSCRTFTEEEECTICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFS
                     GRYFVLMGHLSPIDGIGPREIGLDLLQQRLEQESFHEVILATNPTIEGDATANYIAEM
                     CRMYNVKATRIAHGVPVGGSLEMVDGTTLSHSFAGRRDIDI"
     gene            complement(16510..16839)
                     /locus_tag="PXD18_000633"
     CDS             complement(16510..16839)
                     /locus_tag="PXD18_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001364632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HDL6301094.1"
                     /translation="MFGKGGLGGLMKQAQQMQERMQKMQEEIAQLEVTGESGAGLVKV
                     TINGAHNCRRIEIDPSLMEDDKEMVEDLVAAAFNDAVRRAEEMQKEKMASVTAGMQLP
                     PGMKFPF"
     gene            16979..18064
                     /gene="recF"
                     /locus_tag="PXD18_000634"
     CDS             16979..18064
                     /gene="recF"
                     /locus_tag="PXD18_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HDL6301095.1"
                     /translation="MALTRLLINHFRNIQHTDLAFSPHFNFLVGANGSGKTSLLESIF
                     YLGHGRSFKSHISNRIIHYDKDDFVLHGKIDEAKHSWSVGIQKFRSGETTLKINGEDG
                     NKIADLAHLLPMQVITPEGLTLLNGGPSFRRAFLDWGLFHQHPDFYAHWNNLRRLLKQ
                     RNSALQQVRSYQELKAWDIELVKTTYAVSEMRAEYAEALRPEIEKTCQFFLPEIEIGL
                     SFHQGWEKGADYAEILAQGFERDKALGYTMIGAQKADFRFKANGLPVEDVLSRGQLKL
                     LMCALRLAQGEHLVAQKQRQCLFLIDDFASELDPTKRELLAHRLRESGSQVFVTAITQ
                     DQLNQMQWQDRSDDCLFTVKNGEIQPQ"
     gene            complement(18255..19376)
                     /gene="tyrA"
                     /locus_tag="PXD18_000635"
     CDS             complement(18255..19376)
                     /gene="tyrA"
                     /locus_tag="PXD18_000635"
                     /EC_number="1.3.1.12"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydrogenase"
                     /protein_id="HDL6301096.1"
                     /translation="MNPLAPLREQIDQVDQQLIALLSERLALVAEVGKVKSEHGIPVY
                     APERETAMISARRSEAEKQGIPADLIEDVLRRIMRESYANENKHGFKRVNSDIQKIVI
                     VGGKGKLGGLFGNYLTLSGYNVEALGRDDWDNAEQILANADVVIVCVPIANTLATIER
                     LQSYLTENMILADLTSVKHQPLQKMLEVHNGAVVGLHPMFGPDIASQAKQVVACCHGR
                     FPERYQWLLEQIKIWGAKIEEIEAAAHDNAMTYIQALRHFSTFAFGLHLSRQPVQLSQ
                     LLALSSPIYRLELAMIGRLFAQDGSLYADIIADKPENLATIETLKESFEQGLDFFKRN
                     DKAGFIKAFEEVHHWFGDYSEQFLKESRVLLQQAHDSRK"
     gene            complement(19431..20489)
                     /locus_tag="PXD18_000636"
     CDS             complement(19431..20489)
                     /locus_tag="PXD18_000636"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HDL6301097.1"
                     /translation="MNTVFNQDSVHNVNIQDEKVLLTPQELKQEFPLPEHLRNQIERS
                     RKTISDIIHRRDKRQLIVIGPCSIHDPVAALEYGKKLKALSEQVSDKLYIVMRVYFEK
                     PRTTVGWKGLINDPKMDGSFDVETGLRIARKLCLDLAELGLPLATEALDPMTPQYLAD
                     LFSWSAIGARTTESQTHRELASGLSMAVGFKNGTDGDLAVALNAMQSSAQSHSFIGIN
                     QQGQVTLLKTKGNADGHIILRGGKTPNYEKQYVDDCEWVLKQANLPTAIMIDCSHGNS
                     NKDYRRQPLVAENVLEQLLAGNTSIIGLMIESNLHAGNQSSELPFEQMKYGVSITDAC
                     IDWQTTEELLTHFAEKLR"
     gene            complement(20529..21566)
                     /locus_tag="PXD18_000637"
     CDS             complement(20529..21566)
                     /locus_tag="PXD18_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL6301098.1"
                     /translation="MHNKLLSICILRLSAIGDVCHTLAVIQAIQRKYPSAEITWIIGK
                     TEAYLMKDIPNVHLIPYDKKIGWKGIFTLWQKLSHKRFDFLLNLQTAFRASILSLGIK
                     AKKKIGFNQDRAREMQWLFTNQKVEMTDSPHVLDGQMMFAKAIGIMDLSAQWNLPVSD
                     EDLAYGKQFIDFTRKNILIAPCSSKKEKDWLPERYAEIANWLSKQNINVLIAGSPSQY
                     EMETAAKIQQLAPNCTSIAGKTTLKQLAGVIRQVDLVISSDSGPAHIATTQNTPVIGL
                     YAIHNPRRTGPYNDLDKVVSVYDEAILQSYGKPWQQLAWATKAKGKNWMEKITVESVK
                     QKVVETLKITL"
     gene            complement(21662..23101)
                     /gene="pyk"
                     /locus_tag="PXD18_000638"
     CDS             complement(21662..23101)
                     /gene="pyk"
                     /locus_tag="PXD18_000638"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDL6301099.1"
                     /translation="MSRKLRRTKIVCTMGPATDRGNTLEKIIAAGANMVRMNFSHGIP
                     EDHIERANKVREIAARLGRHVAILGDLQGPKIRVSTFKDGKIFLNIGDKFTLDADLPR
                     GEGHQEAVGLDYKNLPNDVVPGDILLLDDGNVQLKVLEVEGVKVHTEVTVGGPLSNNK
                     GINKLGGGLSAPALTDKDKEDIKLAAKIGVDYLAVSFPQSSADLHYARELAKEAGLEA
                     KIVAKVERAETVATEEAMDDIILGADVVMVARGDLGVEIGDAALVGVQKRLIRRARKL
                     NRVVITATQMMESMIKKPMPTRAEVMDVANAVLDGTDAVMLSGETANGDYPVETVKSM
                     AEVCLGAETMPSINISRHRMEGTFKSIEEAVAMSAMYTANHLEGVSAIISLTHSGETA
                     KLTSRISSGLPIYAMSRNQKALNLCALYRGVTPVYYNEDSRTMEGAKKAIAQLKEQGY
                     LLTGELVLLTHGDELKAGGTNTCRILRVE"
     gene            23228..23716
                     /gene="sixA"
                     /locus_tag="PXD18_000639"
     CDS             23228..23716
                     /gene="sixA"
                     /locus_tag="PXD18_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohistidine phosphatase SixA"
                     /protein_id="HDL6301100.1"
                     /translation="MNIWIMRHGEAGFNASSDAARCLTDNGIKNTISQGKWLGEHLAN
                     QQIQLDKILVSPYLRAQQTLENVLIGMQAVNFPQHFTNLIESWDEVTPDGNPHTVESY
                     LHFLREEGAKNILLISHLPLVFDLVQILTNNQSNVQFPTSTIAEINWVKTKAELIRVK
                     HT"
     gene            23940..24929
                     /gene="dusB"
                     /locus_tag="PXD18_000640"
     CDS             23940..24929
                     /gene="dusB"
                     /locus_tag="PXD18_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HDL6301101.1"
                     /translation="MQIGQYAIKNRIFLAPMAGITDQPFRRLCSQLGAGLTFSEMMST
                     NPDVWHTEKSRLRLAHHDEIGLNAVQIAGSDPVEMAKAAKINVEYGADIIDINMGCPA
                     KKVNKNMAGSALLRNPKLVAQILDSVVNAVDVPVTLKIRTGWDQENRNCLQIAKIAEQ
                     AGIKALTIHGRTRSCLFNGEAEYESIKAVKEAISIPVIANGDIDSAEKAKFVLDYTKA
                     DAIMIGRASFGNPWIFKEINDFFETGLSSPLSIDKKYQLMFKHIEDLHQFYGEEKGYR
                     IARKHVGWYTEKLNPESNFKRTFNTLSSTKEQLYALEDFVKSIHLESQLRKVG"
     gene            24934..25230
                     /gene="fis"
                     /locus_tag="PXD18_000641"
     CDS             24934..25230
                     /gene="fis"
                     /locus_tag="PXD18_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator Fis"
                     /protein_id="HDL6301102.1"
                     /translation="MLEQQPTQNPLTVTMLNAQAQQVNKPLRDNVKAALKNYLSQLNG
                     EDPTELYELVLSEIEHPMLDMVMQYTRGNQTRAATMLGINRGTLRKKLKKYGMG"
     gene            complement(25335..28121)
                     /locus_tag="PXD18_000642"
     CDS             complement(25335..28121)
                     /locus_tag="PXD18_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin family TonB-dependent
                     receptor"
                     /protein_id="HDL6301103.1"
                     /translation="MKYHHFRYSPVALTVLFALSHSYGAATENKKIEENNDLAVLDEV
                     IVTESHYAHERQNEVTGLGKVVKNYHEMSKNQILGIRDLTRYDPGISVVEQGRGASSG
                     YAIRGVDKNRVSLLVDGLPQAQHYHTLGSDANGGAINEIEYENIRSIELSKGASSAEY
                     GSGALGGAIGFRTKDAQDIIKEGQHWGLDSKTSYASKNSHFLQSIAAAGEAGGFEALV
                     IATHRHGKETKIHSEANKLKHNIRRITGFENRYDLYPNSAQNAPGGSFFIVEDTCPTL
                     DCTPRARVKLNRDNFPVRTFPEYTPEERKQLEQIPYRTEQLSAQEYTGKDRIAPNPLD
                     YKSNSVFMKFGYHFNSSHYLGAILEDTKQRYDIRDMQTPAYYTKDDINLSLRNYVYEG
                     DNILDGLVFKPRIPYGLRYSHVKFFDERHHKRRLGFTYKYKPENNRWLDSIKLSADKQ
                     DIELYSRLHRLHCSDYPVVDKNCRPTLDKSWSMYRTERNNYQEKHRVIHLEFDKALNA
                     GQGVFKQTHKLNLGLGFDRFNSLMDHGDMTAQYTKGGYTSYRGRGRLDNPYIYRRDPR
                     SIETVSLCNNTRGDILNCEPRKIKGDSHFVSFRDLVISEYVDLGLGVRFDQHRFKSDD
                     PWTLSRTYRNWSWNGGITLKPTEFVSLSYRISNGFRVPAFYELYGKRNHIGLKDNEYV
                     QRAQRSHQLEPEKSTNHEIGVSFKGQFGYLDVSYFRNNYKNMIATACKRIIQKSHCFY
                     NYHNIQDVALNGINLVAKFDLHGILSMLPDGFYSSVAYNRVKVKERKLTDSRLDSVND
                     PILDAIQPARYVLGFGYDHPEEKWGIGITTTYSKAKNADEVAGTRHHGIHRVDLGGKL
                     TGSWYTHDITGYINYKNYTLRGGIYNVTNRKYSTWESVRQSGVNAVNQDRGSNYTRFA
                     APGRNFSLAFEMKF"
     gene            complement(28215..>29951)
                     /locus_tag="PXD18_000643"
     CDS             complement(28215..>29951)
                     /locus_tag="PXD18_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HDL6301104.1"
                     /translation="SSFVLLNAALLAACSSNGGSFDVQSAKVESQTQTTPKKPSLQDD
                     NSNARRTVSASETEALLQPGFGFSAKIPRRNLFPQGKEDVAPIGDIKEITGDLTKIPY
                     EEEVKAYGSSADGFSHTHDRNHKLYTRDFNFVRSGYVLHSGAKPEIKPKEILRTGAHG
                     YVYYLGIEPAKAIPTQKATYKGYWDFTTDARKGRDSKYFSNSAGINIGATPENSYDIN
                     VDDSEKPMGHTGEFTADFANKTLTGTLVRNGYVSRSKEQKITTIYDIDAKIKGNRFSG
                     KANAKNTDDPYFGKSSTTLEGGFFGGKAQELAGKFLADDKSVFVVFAGKRDAKKDDSE
                     SAFDAFKIKLKDLNKSEMDTFGNATHLIINNKQIPLIAEGKKSFAEMKFDDLVTRTID
                     DKTYRVSVCCNNLDYVKFGTYSEGNNSDTAHQYLVGERTAVADLPTGTVKYRGTWDGV
                     MYSKSGSAGAESPSNSESGTRSLFDVDFVNKKINGKLIANDGVEERPMLTLEGNLKGN
                     GFAGTAKTGNSGFNLDPKSTNGGTVVHINTQFEGGFYGPKATELGGIVHSAETDKDRV
                     SITFGGKRQIEK"
BASE COUNT         8884 a         6387 c         5664 g         9016 t
ORIGIN      
        1 aaagattgta atatccctta tgaaattaac atcaaattat agaggttgat atgtggcgaa
       61 tttttatata tttcttatgc ggtttttcat tagcctatgc gaataccatt tccatagttt
      121 taaaaaatgc tccaacttcg cttattttta cttatttagc ggaagaaacc ggtaaaaata
      181 tggtgcttga tgataatatt gaaaccaaat caacactacg attagaaaat aaatcggttg
      241 acgagatttt taaaacgctt ggcaaagtca ataaattatc cttaacgcaa gaagatgata
      301 ttgtttatat tcacaaaaaa gaggaaaaag cggctgactt aacgcctctg ccaataatga
      361 atttgcaaaa taatgggcaa aatacaccgc ttgtcaccgc ccctaagtta atcacaaaaa
      421 ccttgaaact acattatgca aaggcttcag aggtgattga gtcgttaacc aaaggcagcg
      481 gaacgttttt atcggaaaac ggttatattc actttgatga aagaagcaat agcctgattg
      541 tgaaagacag tgcaaaatcg cttaaaaata tcgagaattt agtaaaacag ctcgaccaac
      601 ccaccgagca aattgcgatt gaggctagaa ttgtcactat cagtagcgag catttgcaag
      661 agcttggcgt tcgctgggga attttttctc gtggggctgg gcactataaa tttggcggac
      721 ggctggaagg caatggactc aacaatgtca ccaataactt aaatgtaaat tttccgatta
      781 ctggtggagc atctgccgta ttacaggttt cgtccattaa tagcagagtg cttgatttag
      841 aattaagtgc attagaacaa gaaaatagtg tggaaattat tgccagccca cgcctgttaa
      901 ccaccaataa aaagccggca agtatcaagc aaggcacgga aattccttat gtgatgtaca
      961 acaccaaatc ggaagccacc gatgtcgaat ttaaagaagc ggtattaggg cttgaagtcg
     1021 ttccacacct ttcaacccaa aatcaaattc tactcgatct gatcgttacc caaaattcgc
     1081 caaattccca atccggcagt agtggcttaa ttacgattga taaacaagag ctaaatacgc
     1141 aagtatttgc caaacacggc gaaaccattg tacttggtgg tatttttcaa catttaaccc
     1201 aaaaaggcga agataaagtg ccgattttag gctcaattcc cttcatcaag cggttattta
     1261 gtcaaactcg agataaaatc agcaaaagag agctagtcat ttttgtgacg ccttatatcc
     1321 ttcaatctaa tgaaaagagc agcaaccgca aaaaatcaaa atagcacatc ataaacgcaa
     1381 gcaaaaatag gggaagtgtg atagaatcag ccgtcatttt ttgagttaaa gatttagagg
     1441 ttttatgaaa atttccccac gtcgccgtgc aagagaatgt gcggtgcaag ccatttattc
     1501 ttggtatatt tcccaaaaca cggttgaaga agtggaattg gcgtttgtga ccgatcaaga
     1561 tatgaaaggc gttgatatgc cttatttccg taaacttttc cgtggcgttg tggataatgt
     1621 agaagccatt gatgaagcat tacgccctta tttagatcgt aaagagtcag atgttgatcc
     1681 tattgaacgt tctattttgc gtttatcaac ttacgaatta aaatttgaac acgatgtgcc
     1741 tttccgtgta gtcatcaatg aagggattga agtcgctaaa gtgttcggct ctgatgacag
     1801 ccacaaatac attaacggca ttttagataa attagcccca gcattaggca gaaaataata
     1861 agattcccca atttatacat aaattgggga ttttgattat aacgctcaag gagatttttt
     1921 atgggtgaat ttgatattat cgaacgctat tttaatgctt ctcaacgccc acctcgcaaa
     1981 gatgttttac tttctatcgg cgatgactgt gcgctcacat cactcaaacc aaatcagcaa
     2041 cttgcgatca caaccgatac ccttgtttgc ggcactcatt ttctaccgac tatttcacct
     2101 gccgatctcg cttataaaag tgtggcgtcc aatttaagcg atcttgccgc aatgggtgca
     2161 gaacctgcat ggatctcttt agccttaacc ttacctgaaa ttaatcacga ttggctagct
     2221 gaatttagtg aacatttctt tgagattctt gatcactata atgttgattt gattggaggg
     2281 gatactactt gtggaccact atctttgaca atcacagctc aagggattgt gccacaagat
     2341 agaggcttat tccgccataa tgctaaagta ggcgattgga tctatgtttc cggcacactc
     2401 ggtgacagtg caggtggttt gcaacttctg ctaaatcagc aaagcgagca agtgaattgg
     2461 aataaagagc aaagctacct gattcaacgc catttacgcc caacacctcg agttttactt
     2521 ggcttgacta tcgcctctat tgctaatgca gcgattgata tttcagatgg tctattgtct
     2581 gatttaagcc atattttaaa gcgcagtgac tgtggtgcag tattaaacct tgagaatttc
     2641 cccttgtctg acgtcttact tagttgttat tctcgaacag aggcagaata ttttgcctta
     2701 aacggtggcg aagattacga actctgcttt accgtgccaa atgacaacaa agccaaatta
     2761 gacaaagcat tagccaatat cggagtaact tatacatgta ttgggcaaat tcgttcggct
     2821 aaagaaggtt taaccctatt acgtcataat cagcctgtca ccttgccctc acaacgaggc
     2881 tacgatcatt ttaaaaaata acgcaatgaa accaattaat cttaaaaatc cgattcattt
     2941 ttttgccttt ggctttggtt caggcttatt aaagcctgct cccggcacct ggggtagcct
     3001 cgccgggcta attgtagcaa tagccttgtg gtctatcaca caatccgccc tgtttttcgg
     3061 cttactcacc ctagtttctt ttattgccgg ttgtgttatt tgcaccaaag ccagccaaga
     3121 tctagaagta cacgatgacg ggcgaattgt ttgggacgaa atagttgcca tctttttgat
     3181 gttcacctgt ttgcctgaat acaatcttct tggctacctg ctcgccttta tcagctttcg
     3241 catttttgat attttgaagc cttttccaat ccgctatttt gatgaaaaat tagaaagcgg
     3301 tttaggcatt atgtttgatg atattctcgc agccattttt gccctgattt cacttcatct
     3361 tttatattat ttcatttaaa aatttatgct cactatttta tttattcatt ttgccgggct
     3421 tatcagcccc ggccccgatt tcttctatgt cgtcagacaa tccgccagcc actcagttaa
     3481 aagtggggta cttgccgcaa ccggaatctc aatcggcatt attttttggg cagcctttgc
     3541 gatttttggt ttagcgtggc tcagtaatag tattggctcg ctgtttcaat atgccattat
     3601 gattatcggt ggctgttacc tggtttatat tggctctcaa atggtacggg taaccgaaaa
     3661 tatcattttt gttgaaaata aagctcaact cacgccgcta aacccttggc aggaaattaa
     3721 aaaaggctta ttaatcaata tctttaatgc caaagctggc gtttacttta ccagcgtcat
     3781 ttcagcctat gtagataatt taagcaatac cctacaaatg ttcgaactac ttctactctt
     3841 tgtggtaagt acctttattt atttctgtgt ggtggcacta ctcttttctc gccgaccggt
     3901 cagactgttc tatgccaaat atagtcgcta tattgacaat atctcaggcg taattttcat
     3961 cttattcggc tcgatgctga tttatgaagg attcagccac tttatctaat cacaagcggt
     4021 ctgatttcac taaaaatttg caaattccgc tatcaataaa tagtgttatt ttatacagtt
     4081 tctgctatgc tactgccaat tttaactctg agagaacaaa atgattggac gattacacgg
     4141 caaaattatt gaaaagcaac cgcctgaaat tttattagac gtgcaagggg taggctatga
     4201 actactgctc ccgatgacca gtttctacag cctgccacaa attggcgaag aggcgactat
     4261 tttcacccat ttagtggtgc gagaagatgc tcacttgcta ttcggctttg cccaaaaaca
     4321 agatagaact ctattccgtg aattaattaa aaccaacggt gtcgggccga agctcgcgtt
     4381 ggcaattcta tcagcaatgt cggtgtcgca atttgccacc gcgattgaaa atgaagagct
     4441 ggcaaaatta accaaaattc cgggaatcgg tcggaaaacc gcagaacgct tattggtgga
     4501 actcaaaggc aaatttaaag gaatggcaca gagtgatttc tttgtggaag tatcgcacga
     4561 gcaaattgtg gcaagtaata cgccagaccc ggcaaatgaa gcccttgatg ccttaatagc
     4621 cctaggctac aaacctgccg atgcggaaaa aatgattaag aaagtgaata aatccggtgc
     4681 aacgagcgaa cagcttattc gtgaggcgtt aaaaaattca ttatgatatt gatagtatag
     4741 ggcgaaagat atttcgcccc tacaatctca tttttaaaaa tatatgtgta ggggcaaatc
     4801 aatatttgcc ctcatgagta atatagggta ataccattcc actacaacaa taatctaaat
     4861 gtatgattga agcagataga atcatcagtg cctcgcctaa gcgtgaggaa gaagttatag
     4921 accgagcaat ccgcccgaaa ctgcttgccg actatgtcgg gcagccttct gtgcatgatc
     4981 aaatggagat cttcatcaaa gccgctaaat tgcgggaaga ggcattagat cacttgctca
     5041 ttttcggccc gcccggtttg gggaaaacta cccttgccaa cattgtggca aacgaaatgg
     5101 gggtgaatat tcgcacaact tcagggccgg tgctggaaaa agcaggcgat ttggcagcaa
     5161 tgctgaccaa ccttgaacct tacgatgtgc tgtttattga tgagattcac cgcctttctc
     5221 cagcgattga agaagtgctt tatcctgcaa tggaagatta ccagctcgat attatgattg
     5281 gggaaggacc tgctgctcgt tccatcaagc tcgatctacc gccttttacc cttgtagggg
     5341 caaccacccg tgccggctca ctgacctcac cgttacgaga tcgttttggg attgtacaac
     5401 gcttagaatt ttactcagtg gacgatctta ctctgattgt caaacgcagc gccgattgct
     5461 taaatctcaa tttgtcggca gacggtgctt atgaagtggc tcgccgctcc cgtggcacac
     5521 cccgtattgc caaccgctta ctccgccgag ttcgggatta cgccgatgtg cgtaataatg
     5581 gcattattac ctcagacatt gccaaacaag ctctggcaat gctcgatgtg gattcggaag
     5641 gctttgattt tatggacatt aaactgttgc aagcgattgt agaacgcttt gatggcgggc
     5701 cagttggatt agacaatctt gcggcagcta tcggcgaaga acgagatacg attgaagatg
     5761 tgctagagcc ttatctgatt cagcaaggct ttctacaacg cacaccaaga ggcagaattg
     5821 ctaccagcag aacctatgcc catttaggta taacccaaat agattagtca tatttctaaa
     5881 ggcattgata cataaataaa aagcggatag ttagtactat ccgctttcat ttgcaaaaaa
     5941 tcaataaaat ttgaccgctt atccgctagg ctttttcagt ctcaaaacgc tcaaaagcta
     6001 atactctgct ttctaatttt ctgagaacga ttgtcataat gccggtaatt accaagtaaa
     6061 taacccctgc cataccataa attgataatg cgtcatactc tgtaccataa agctggcgag
     6121 catagcccat aatatccata atcgtaatgg ttgaagcaag cgatgtgcct ttaaaaacta
     6181 gcacaatctc attactataa gaaggtaaag cacgttttaa tgcgtaaggc actaaaattt
     6241 tcagtgtatc taaacggctc aaaccaaggg ctgcgcaagt ttcccattgc cccttcggaa
     6301 tcgcttttac cgcaccgtgg aacaacaatg tcgaataggc agcactgttt aacgctaaag
     6361 ccaacattgc acagaaccaa gcgtcggata ataataccca agccgcactt tctgtaatcc
     6421 attcaaattg ccccgggcca ctataaatca agaaaaattg aattaataaa ggcgttccgg
     6481 taaaaagcgt aataaatccg tttaccaacc actttaacgg acgattttct aacgagagaa
     6541 taaacgtaag aatgatcgct aaaataaagg caatgatgag cgccacaaaa gtgagctgta
     6601 ggctggtgcc aataccctgt gaaatttcaa ctaaataatc ccaccacatt aagcaactcc
     6661 tcgctcaaaa cgggtaaatc taccttctaa tactttaatc actcgctggc taattagagt
     6721 aatcgctaaa taaataagtg ctgctatccc ataccaagta aaaggttgat gagtattagc
     6781 attaattaac tccgattgac gcattaaatc atctacccca attaacgata ccaatgccgt
     6841 atcttttaac agcactaacc actgattgct taagcctggt aaagcgtgtc gccagacttg
     6901 agggagaata atgcgaacaa atacttgcgc tcggcttaac cctaacgccg taccagattc
     6961 ccactgccca actggaatag ctttaattgc accacgtaaa gattgggaag cataagcagc
     7021 aaaaataata cccagcgcaa tagccccaca ccagaaagca tttaactccg caaactcatc
     7081 ggtgatcaag aaaataactt ggataagacc aaaatagatc aaaaatacca ctaaaatctc
     7141 cggcaaccca cgcaataatg taattattat actagttggt ttacggatac atgcaatctt
     7201 actggtttca agtaccacaa aaaagattga caataacatt ccaatcaaga ggcttgccag
     7261 cgcaatccct aaggtcatca gggttgcgtt gacaagtaag tttaaaatat cgctagacat
     7321 tatttcccag ccatccaagt attataaatt tgctcatatt taccatttgt tttgatggta
     7381 gctaaagccg aatttaattt ttcaagcaat gcagtgttag atttatttac cgcaatacca
     7441 tatccattac caaaaaaggc tttatcgact actttttcac ccacgaaatc taactctttt
     7501 tcggttttta gccactctgc caatactggt gtatcaccaa ataccatatc aacacgtcca
     7561 ttttttaaat ctaacactgc tgattgtagg ctagcgtaag gttttaaatt atattgtttg
     7621 gcatttttgc ttaagtattg ttgaaaagtt gtaccatttt gcacgccgac attcttagct
     7681 gtttccggtg taaatttccc cttcattgcg acataactta ctgagttttc taaataagca
     7741 ttggtaaagg caacctgttt ttgacgcgct tcagtaatat ccatgcctga aataattgca
     7801 tcaaaatttt taaattttaa tcccgcaatt aagctatcga atgattgcgt tttaaattcg
     7861 caagttgctt ttagttcttc acataatgct tttgcaatat ctacatcaaa gccaataact
     7921 tcaccttttt catttgttgt ttcaaaaggg gcgtaagaag gctccatcgc aaaagtgata
     7981 gtttcttgtg cattggcaga aagcgttgca aatgcgatag cggaagctaa taataatttt
     8041 ttcattgttg tgtccttttg ttgttataga ttactctgag tgagataaat attgagcaaa
     8101 ttgctctgtt ttcggtgatt caaaacaact tgcatcacct tgttcaataa ttgtaccttt
     8161 ttccatgtac accactttgc ttgccacctt acgagcaacg cctacttcgt gagtcacaat
     8221 cacctgagta atgcctgtag attgcaattc tttaataata tcaactactt gtgcagtaat
     8281 ttccgggtca agtgctgcgg taggttcatc aaataataag acctgtggct gcatcatcag
     8341 tgctctggca atcgccaccc gttgttgctg accacctgaa agatgcagtg ggaaacgctc
     8401 ggcaaactcg ctcaaacgca aacgtgccaa atgtcctttt gctctggcaa ccgcttcttc
     8461 tttgcttaac ccaagcactt tcatcggggc ttcaattaag ttttgcatta cggttaaatg
     8521 cggccataaa tgatactgct ggaacaccat tcccacctca cggcgtaaca aactcaccgc
     8581 tttgctgtcg gttttagcag ttaaatcaaa ttgatgattt gcaatcgcca aagtgcctga
     8641 ttgcggtact tccattaagt ttaaggttcg aattagggta cttttacctg ccccactcgg
     8701 gccaagcaat acaacagtat cccctttttc aatctctaag ttaatgtcaa ataaggcttg
     8761 gtttgagcca taaaaaaaat tgacattttg aatacgaatt gccattcgtt aaaatcctac
     8821 tacatttaaa ataatgaatg aatactaatt atttttgcat aactatgcaa tatttttttc
     8881 ttttagaaca aaatttttgt aataaaatag cacttacatc gtctaacatc gttaaatggc
     8941 gtaatttatt tggaatatga atactgatta cgctataatt ttcgccgaga caattaaaaa
     9001 taggatttca atatgattag atactttttt tcactcgtct tgagtttatt gatgataaac
     9061 tcatctcacg caaatctttt ctctcaaccc aaattcctaa aatcggaaga agcctttgtt
     9121 ttttcaatcc aaaatgaaaa tgaaacatta cagttaaatt gggatattgc agacaattat
     9181 tatctttata aaaaagaaat ccgtgtcacg ccacagaata ttgagatagg cgacatcact
     9241 tttcccgctg ccgagcaata taacgatgaa tttttcgggc aggtggaaat ctatcgcaac
     9301 cacttagggc taaaggtacc gtttaaagaa attaaagaca acgcctcaat cgtagtggaa
     9361 tatcaagggt gtaccaaagg cttttgctat ccaccggaac gggttgagct taaattagac
     9421 agtattctct ctgctacacc tgaagaactg gcgcaactgg aagcacaagc ggtcgaaaag
     9481 agcgaaaatt ttgcaaaaac cgacaatatg gcgccccctg aaaatgtggc aaaagcagag
     9541 caagatcaac tggctgaaaa tttagctaac aatcgttttt ccattttttg gttttttgta
     9601 ttaggcgttg gattagcatt cactccttgc gtactgccga tgctaccact tctctctgcg
     9661 attgtaattg gaaataagca acgcccttct accgctaaag cattgctgtt aagtattgcc
     9721 tatgtgcaag gaatggcagt tacttacacc ttacttggct taattgtagc ggctatcggc
     9781 ttgcctttcc aaatcgcctt acaaagccca ccggtgttga ttggtttatc tatcgtcttt
     9841 attctgcttg cctgctcaat gtttggctta tacgaaatcc agctaccaaa tagctggcaa
     9901 caaaaactca atgcaatgag ccaaaaacag caaggtggtg cgttgggtag cgtgttttta
     9961 atggggatga tcgcaggctt aattgcttcc ccttgtactt ctgccccact ttccggtgcg
    10021 ttgctttatg tggcacaaag tggcgattta gtcaccggtg gcttagccct ctatctactc
    10081 gcactgggaa tgggcttacc gctgattttg attaccttat tcggcaacaa aattctgcca
    10141 aaatccggcg aatggctgtt aaaagtgaaa gctgcattcg gttttgttat gcttgcctta
    10201 ccggtgttct tattaagccg tgtgctgcca agccactatg aaccgttttt atggtcggcc
    10261 cttgcggttg catttttgat ctggttggtg gatgcgattc catctaattc aatcacgaaa
    10321 aagatcatca aagtcttatt attgctcgct ttagccattg ccgctaaacc ttgggcagat
    10381 ttagcttgga acggctcaac cactcaacag caaactacac cgcacttagc gttagaaaaa
    10441 attcaatcac ttgccgattt agagacaaaa ttgaccgctt ccaaaggtaa aaaagtgatg
    10501 ctcgatctct atgccgactg gtgtgtcgcc tgcaaagagt ttgaaaaata cacctttagt
    10561 gaccaaaatg ttcagaacaa actgaatgaa atggtagtgt tgcaaatcga tatgacgaaa
    10621 aactcggctg aaaatatcga gctgatgaaa cactttaatg tattaggttt gccaacgatt
    10681 ctgttttttg atgaaaacgg caatgaaatg agccaatctc gtgttactgg ctttttggat
    10741 gccgagcaat ttttagcttg gctgaataag ttataaagaa aagaaatgaa tcaagaaaat
    10801 cataaaattg aagacattat tcgcattttt aatcaatgct tttctgatga atataacact
    10861 cgcctagagc gggggggtaa ttatccgatt tacttgcccg aatttatgga cgaagatggt
    10921 gtgccgagcg aacgccctta caatgtgatt ttatttgctc acggctatta cagcagtgcc
    10981 ttgcacgaaa ttgcccattg gctcgttgct ggagaagctc ggcgtaaact tgaagatttt
    11041 ggctattggt acgagccgga cggacgctct gccgaacgcc aacgtgaatt tgaaagtgcg
    11101 gaaatcaaac cgcaagcgat tgaatgggtg ttagcaactg ctgccggttt tcgttatttt
    11161 gctagtgccg acaatctctc gggcaatccc ggcgataatt cagcctttaa acaagcagtg
    11221 tacgaccaag tcaagctcta tgcagaacgt ggctaccttc ccaaacgagc tgaaaccttg
    11281 cgtaaagccc tctgtgcttt ttacggtaca cctgatgtga ttgatttagc tcaatttgat
    11341 attgaacgaa tttagttgca aaatttttaa caaaacagac cgcttgttgc atatacaagc
    11401 ggtctcattt ttgaaaaata ttgcatttgt actaaacgat accctactta tctatttcta
    11461 ttgccttgat tacttcctat ccaaaaccct ttgtttcaga gtacaactgt ttcttttttt
    11521 catattttct attatattag cgtacaactg ttcactgaaa tagaaagtaa aaataagatt
    11581 atgagcactt tagattttca ctttatccac cgtttccacc agcaagttca ggctcttagc
    11641 caccacccag ctttacgttt tatgcaagat gaaaaatggt cagaaataag ttggttagaa
    11701 ttacaaaaac aggtcaataa tctttcttat gccttgctgg caaacggtct tgccgttcaa
    11761 gagaaaatcg ctatttttgc acaaaatatg cctcgttgga caattaccga tattgctgca
    11821 atgcaaattc gtgcggtagc agtgccgatt tatgcaacca gtaccaccaa acaacttgaa
    11881 tatatcctga atgacgggga tataaaaatc ctctttgttg gcgatcagga acaatatgat
    11941 caagccatag aaatagcgaa caactgttcg ctattaataa aaattgtcgc gatgaaagac
    12001 tcaatagatc tgcgtgattt ccctatcgct caacattggc aagatttcat taaggttaat
    12061 caagatgaag ctgaattaac caaacgttta aatgataaat gcttagagga tttattcact
    12121 ttaatttata cctcgggaac aaccggtgag cctaaaggtg ttatgttaga ttatgctaat
    12181 ttagctcatc aacttcaggc acataataaa gcactccctc atattgacga aaatgatata
    12241 tccctttcat ttttaccttt atcgcatatc tttgaacgtg cttgggtcac ttatgtgcta
    12301 tacagagggg cagtaaattg ctatctggaa gatcctcaac aggtacgtca agcactctca
    12361 acggtacgac ctacattaat gtgtgccgta ccaaggttct atgaaaaaat ctatactgcg
    12421 gtgtgggata aagtccaaca agcaccgata catcgccgag cgttatttaa atgggcaatc
    12481 cgtaccgccg aagacaatct gtttggtaaa aaatcagcct ttttccaccg cttgcagtac
    12541 attatggcag ataaattggt gctaggaaaa ttacgagcct tactaggcgg tcgtattcgt
    12601 atgatgccgt gtggaggagc taaattagat ccgtctatcg ggctattttt ccaaagtata
    12661 ggcatcaatg taaaacttgg atacggaatg accgaaacta ctgccactat ttcatgctgg
    12721 caggaaaaag gctttaatat caactcaacc ggtaccttaa tgcctgatgt tgaggtcaaa
    12781 attagtgaag aaaatgaaat tttagtgcgt ggaggcttgg ttatgaaagg ttactacaaa
    12841 aaaccggaag ccactgctca agcctttact gctgaaggtt ttctaaaaac gggagatgcc
    12901 ggtgaactgg attcggaagg caatctttat attaccgatc gtattaaaga attaatgaaa
    12961 acttcaaacg gtaaatatat tgccccacaa tacattgaag gaaaaatagg taaagataag
    13021 tttattgagc aaattgcggt gattgctgat gccaaaaaat atgtttctgc gttgatagtt
    13081 ccttgctttg atagcctcga agagtatgca aaaaagctca atattcgcta tcaagacaga
    13141 ttagaactca ttaaacatta tgaggttgtc agaatgtttg aacaacgcat taacgaatta
    13201 caaaaagacc ttgcaagttt tgaacagatc aaaaagttta cactactttc gcaagcattt
    13261 agcaccaaaa tggaagaaat tacgcctaca ttaaaattaa gacgaaaggt cattctagaa
    13321 cgctataagc aacaaatcga aaaaatgtac gaatcataat gaaaaacaga gatcgtcttt
    13381 ctgcttttca tttataccgc agcggtaacc acaatttcga ctttccaatt tggattggct
    13441 aatttagcct ccaccgccgc tcttggtgga gcgttatttg gggcaaccca ttcgtcccac
    13501 gcacggttca tttccgcata atctgccatc tcttttaaat aaaccgtagc cattagaatt
    13561 ttacttttat cgctgttggc ttttgccagc catttatcaa tttctgcaag cacttgctgg
    13621 gtttgggtgt aagcatcggc ggtgtcatct aacggcactt gccctgccaa gtaagccaca
    13681 ccgttatgta ttgccatttc cgaaaaacgg ctacctactt caaaacgttg aatcattttt
    13741 acctctactg ttttatacat tgccctttat aagctttatg cccttttatt tcttgcttga
    13801 tatccatttc tttttcatca aaatcagtga tgattagttc cactgtttta ttattatcac
    13861 tatcagaaag tgagctaaat aaattctctt caaattgttg tagctccgca tcacgttgta
    13921 attcagacca tatttgtgaa cgatggctac gctgtacaga ttctgagacg atacgataaa
    13981 caatagcccc gtttttcaca ctccagcgcc cattctgttg taatgaatac tcaaaaatcg
    14041 acttttgaat agggtaatat ataccacctt gattggtcat agtcccattt gtggaaaatc
    14101 gtaaattatc caccgtacga atattaaaat catcgtactc aatagtgcat tgccattgcc
    14161 caatcagttg attaggatta gaaattgttg aggaacaacc agctaatgca agtgctgata
    14221 aacctaaaaa aattaacttt ttcatattct ctaaataaag acaagcggtt gaatttgcaa
    14281 aaagttttgc caattcgacc gcttgttact tgtgtaaaat tactctactt ttacaatcca
    14341 gccttgcggt gcttcaacat cgccaaattg aataccggtt aattctgcgt ataaacggcg
    14401 ggtgacaggc cccacttcgg tttctgaata gaagacgtgg aatttgtctt tatgttgaat
    14461 accaccaacc ggcgtaatca ccgcagccgt accacaagca ccggcttcgg caaattggtc
    14521 taactggtcg atatacacat ctccctcaat cgcttccata cctaaacgct cttgagcaag
    14581 gtgtagcaat gagtatttgg taatacttgg caaaatcgac tctgaaatcg gggtgatgaa
    14641 tttgttgtct ttggtaatcc caaagaagtt cgccgccccc acttcttcaa ttttggtatg
    14701 ggttttcgga tctaaataaa tcgcatcggc aaatttacgg gtagttgaac tttgctcaac
    14761 cgccaattcg tgcggtaata aactcgcagc gtagttaccg cctactttca caccacctgt
    14821 tcccattggg gctgcacggt catagtcggt tgtaatgaag tttgagggtg ctaagccacc
    14881 tttgaaatat gcccccaccg gacagcagaa tacggaaaaa ataaattcag gtgcagcttt
    14941 caccccaata ttttcgccca cgccgattaa aaacggacgt aaataaaggg ttgcccccga
    15001 accgtaaggc cctaaccaat cttgattggc ttttaccact tttttacagg cacgaataaa
    15061 cagctcggtt ggcacacgtg gcattaataa acgatctgcg gtgcgttgca tacgctcggc
    15121 attttgatcc gggcggaata agttaattga gccatcttta cagcgatagg cttttaaccc
    15181 ctcaaaacat tgttgcccat agtgcagggc agttgagcct tcgtgaatat gcagtgtatt
    15241 gtcttgagtt aattcgcctt cattccattt tccgtctttc caatgtgcaa tgaaacggta
    15301 atcggttttg atataagaaa agcctaaatt tgcccaatct aactctttta atgccatgtt
    15361 gtgtcctttt atttttatgt tacgaaataa ttttgacatt ctaaaacaaa atagctcttg
    15421 aggtaagaag tttaagccta aatcgcaaga aaaaattaag gctcttaaac ataagagcct
    15481 taacatactg gtttgaaatt atgctgcgtg ttttgctgcg gtttctttta ataaggtttg
    15541 aagttcgcct ttttggagca tttctaatac gatgtcacaa ccgccaacta attcaccttc
    15601 tacccataat tgtgggaaag tcggccagtt tgcaaatttt ggcaattccg cacgaatatc
    15661 cggattggtt aaaatatcca cataaccgaa aggcacttgg cagttaatta ccgcttccac
    15721 cgcacgagcg gagaaaccac aagatgggaa tttcggtgaa cctttcatat aaagtagaat
    15781 cggattttcg ctgatttgtt gtttgatttt gtcaatagtt tccattttta gcctcaaaat
    15841 aataatttaa aatagttgag taattatatc agaattaagt tagcacagaa atagctttaa
    15901 atatcaatat cacgccgtcc tgcaaaagag tgagaaagcg ttgtgccatc aaccatttct
    15961 aatgaaccac cgaccggcac accgtgagca atacgagtag ctttcacgtt atacattctg
    16021 cacatttcag caatgtagtt tgcggtagca tcaccttcaa tggtcggatt agtcgccaaa
    16081 atcacttcgt ggaaagattc ctgttccaag cgttgttgca ataaatctaa gccgatttca
    16141 cgagggccta taccatcaat cggcgacaaa tgccccatca gcacaaaata acgccctgaa
    16201 aattgcccgg tttgctcaat cgcttgaatg tcttccggca tttctaccac acaaagttgc
    16261 ccgctcatct gacggcgagg atttttacaa atcgtacact cttcctcttc ggtaaaagta
    16321 cggcacgatt tgcaatgtcc gatatggctc attgcctcat ttaaggcttt tgacaacgcc
    16381 acaccgccgg aacgattacg ttgcaacaga tggtaagcca ttcgctgtgc cgatttcggt
    16441 ccgacaccgg gcaatgcacg caaggcttcc atcaaatttt caagtaaagg actggtttgc
    16501 atacttaaat tagaatggga atttcatacc cggcggcagt tgcataccgg cagtcacact
    16561 tgccattttc tctttttgca tttcttctgc acggcgaacc gcatcgttaa aggcagcggc
    16621 aactaaatct tccaccatct ctttatcatc ttccattaat gatggatcaa tttcaattcg
    16681 gcggcaattg tgagccccgt taatagtgac ttttaccaaa cccgcaccag actcgcctgt
    16741 tacttctaat tgggcgatct cttcttgcat tttttgcata cgctcttgca tttgctgagc
    16801 ctgtttcatt aagccgccta agccaccttt tccaaacata atttttcctc ttaattttca
    16861 ataaaaaata aacggcttat tctactgaac cactttctaa tccgcaagcg gttaattttt
    16921 cccaaaattt tgcaaatttg ctaaaatggc tactcttttt attcctcgca ctttaactat
    16981 ggctttaacc cgtttattaa tcaaccattt tagaaatatc caacataccg atttagcatt
    17041 tagcccgcat tttaattttt tagtcggggc gaacggaagt ggcaaaacca gtttgttgga
    17101 atcaattttc tatcttggac acgggcgttc attcaaaagc catatcagca accgcattat
    17161 ccattacgat aaagacgatt tcgtactaca cggtaaaatt gacgaggcaa agcacagttg
    17221 gtcggtcggc attcagaaat ttcgcagtgg cgagacgaca cttaaaatca acggtgaaga
    17281 cggcaacaaa attgccgatt tagcccattt attgccgatg caagtgatca cccccgaagg
    17341 cttaacctta cttaacggtg gtccgagctt tcgccgtgct tttttggact ggggcttatt
    17401 tcaccagcac cctgatttct acgctcattg gaacaatctt cgccgtttat taaagcaacg
    17461 taattcggct ttgcaacaag tccgctctta tcaagaactc aaagcgtggg atatcgaatt
    17521 ggtgaaaacc acttatgccg tgagcgaaat gcgagccgaa tacgccgaag cgttacgccc
    17581 cgaaattgag aaaacctgcc aatttttcct gccggaaatc gaaatcggct tgagctttca
    17641 tcaaggctgg gaaaaagggg cggattatgc cgagattctg gcacaaggtt ttgagcggga
    17701 taaagctctt ggctatacga tgattggagc tcaaaaagcc gatttccgtt ttaaagcgaa
    17761 cggcttaccg gtggaagatg tgctttcccg tgggcaatta aagctattga tgtgtgcgtt
    17821 aagactggct caaggcgaac atttggtcgc ccaaaaacaa cgccaatgcc tatttttaat
    17881 tgacgatttt gcctccgaac tcgacccaac caaacgtgag cttttagcac atcgtttaag
    17941 agaaagtggc tcacaagtat tcgttaccgc cattactcaa gatcagctca atcaaatgca
    18001 atggcaagac agaagcgatg attgtttgtt tacggtaaaa aatggagaaa ttcagccaca
    18061 gtaagcggtc agatttgggg gcaattttac aaaaatgttt cttccgatgg cgcgagcgtc
    18121 cacgctcgtg ccaaaacaag cggataattt tgcataaaaa tttgcaaaaa acagctcttt
    18181 attaaccgct tgtagaatat taaatagcac tagcgtggac gctagtgcta tcagagcaaa
    18241 acctcaacct acctttactt tcttgaatcg tgagcctgtt ggagcaatac tctactctct
    18301 ttcaagaact gctcggaata atcgccaaac cagtgatgca cttcctcaaa agccttgata
    18361 aaaccggctt tgtcgttgcg tttaaagaaa tctagccctt gttcaaaact ctcttttaag
    18421 gtttcgatgg tggctaaatt ttccggttta tcggcaataa tatcggcata taagctgccg
    18481 tcttgggcaa ataaacgccc aatcattgcc aactctaagc ggtaaatcgg cgaagatagt
    18541 gccaataatt gagagagttg caccggctgg cgagaaagat gtagcccgaa tgcaaaagtg
    18601 gaaaagtggc gtagggcttg aatgtaggtc attgcattat cgtgtgctgc tgcctcaatc
    18661 tcttcaattt ttgcccccca aattttgatt tgctcaagca accattgata acgttcaggg
    18721 aaacgcccgt ggcagcaagc gaccacttgc tttgcctgac ttgcaatatc cggtccgaac
    18781 atcgggtgta aaccgactac cgctccatta tgcacttcca gcattttttg caacggctga
    18841 tgtttgacgg aggttaaatc cgccaaaatc atattttcgg ttaaataaga ttgtaaacgc
    18901 tcgatggttg ctagggtgtt ggcaatcggc acacacacaa taaccacatc tgcattggct
    18961 aaaatctgct cggcattgtc ccaatcatca cgtcctaatg cctcaacatt atagccggat
    19021 agggttaaat aattgccaaa cagcccacct aatttccctt taccaccaac aatcacgatt
    19081 ttttgaatgt ccgaattaac tcttttgaag ccgtgtttgt tttcattggc ataagattca
    19141 cgcattatac ggcgtagcac atcttcaatg agatccgccg gaataccttg tttttccgct
    19201 tcagagcggc gggcggaaat cattgcggtt tctcgctccg gagcataaac aggaatgccg
    19261 tgttctgatt tgactttccc aacttctgcc acaagagcta agcgttcaga aagtaaggcg
    19321 ataagttgtt gatcaacttg atcaatttgt tctcgtaatg gggctaatgg gttcatattt
    19381 gttaccaatt tacaagcggt cgtttttatg caattttttg caaattatct ttaacgcaac
    19441 ttttcagcaa agtgagttaa aagctcttct gtagtttgcc agtcaataca agcatccgta
    19501 atagaaacac cgtatttcat ctgctcgaac ggcaattctg atgattgatt acctgcgtgt
    19561 aaattgcttt caatcattaa accgataatc gaagtattgc cagcaagtag ctgctctaat
    19621 acattttctg ccaccagcgg ttggcggcgg taatctttat tggaattgcc gtggctgcaa
    19681 tcaatcataa tcgctgtagg taagtttgct tgttttagca cccattcaca atcatcaaca
    19741 tattgctttt cataatttgg ggttttaccg ccacgtaaaa taatatgtcc gtctgcatta
    19801 ccttttgttt tgagtaaagt aacttgcccc tgttggttaa tgccgataaa gctatggctt
    19861 tgagcggaag attgcatcgc attaagtgca acggctaaat caccatctgt accattttta
    19921 aagcctaccg ccattgacaa acctgaggct aattcacggt gagtttgaga ctcagttgtt
    19981 cttgctccaa ttgccgacca gctgaacaaa tccgctaaat attgtggtgt catcggatct
    20041 aaggcttcgg tcgctaacgg caagccaagt tcggctaaat ccaaacagag ttttcgtgcg
    20101 atacgtaagc cggtttcgac atcaaaagag ccgtccattt tcggatcgtt aatcagccct
    20161 ttccaaccta cagtagtgcg gggcttttca aaataaaccc gcatcacaat atacaactta
    20221 tcactcactt gctccgaaag agcttttaat tttttaccat attcaagggc agcaactggg
    20281 tcgtgaatcg aacaaggtcc aatcacaatc agttggcgtt tatctcgtct gtgaataata
    20341 tcggaaatcg ttttgcgtga acgttcaatt tgattgcgta aatgttccgg caacggaaat
    20401 tcttgtttta actcttgtgg ggtcagtaat accttttcat cttggatatt tacgttatgc
    20461 acgctatctt gattaaacac tgtgttcatt ttaatttcct tttgtgtaaa tcttttaata
    20521 cacaaacttt acaacgtaat ttttaaagtt tcaactactt tttgtttcac actctccacc
    20581 gtgatttttt ccatccaatt tttgccttta gctttagttg cccaagctaa ttgctgccaa
    20641 ggtttaccat aagattgcaa aatcgcttca tcatataccg aaaccacttt gtctaagtca
    20701 ttgtaagggc ctgtccgtct tggattatga atcgcataca acccaatcac cggcgtattt
    20761 tgcgtagtgg cgatatgggc aggacctgaa tctgaagaga tcaccaaatc aacctgacga
    20821 ataacacctg caagctgttt tagcgtggtt ttaccggcaa tactcgtaca attcggggca
    20881 agttgttgaa ttttggctgc ggtttccatt tcatattgcg atggagaacc tgcaattaat
    20941 acattgatat tttgcttact tagccagtta gcaatttctg catagcgttc cggcaaccaa
    21001 tctttctctt tcttgcttga acaaggagca atgagtatat ttttccttgt aaaatcaata
    21061 aattgtttgc cataagctaa atcttcatca ctcacaggta aattccattg tgccgataaa
    21121 tccattatcc caatggcttt ggcaaacatc atttgcccgt caagcacgtg aggagagtct
    21181 gtcatttcta ctttctggtt ggtaaacaac cattgcattt cccttgctct gtcttgatta
    21241 aagccgattt ttttctttgc tttaatccca agcgatagaa ttgaagctcg gaatgccgtt
    21301 tgtaaattta ataaaaaatc aaaccgcttg tgagaaagtt tttgccaaag tgtaaagata
    21361 cctttccacc ctattttttt atcataagga attaagtgaa cattcggaat atctttcatt
    21421 aaatacgctt ccgttttgcc gataatccaa gtaatttcag cactaggata ttttcgttga
    21481 atagcttgaa taaccgctaa ggtatggcaa acgtcgccaa tggcagaaag gcggagaata
    21541 cagatagaaa gaagtttatt gtgcataata atatcaatag ttcagattac attaagctat
    21601 attaagacag aaaaaaagcc acataaagtg ttttatgtgg cttttgcgtt aatcgtttag
    21661 attattcaac tcttaagata cgacaagtat ttgtaccgcc agcttttaat tcatctccgt
    21721 gagttaaaag cactaattcg ccggttaata aatagccttg ttcttttaat tgagcaatgg
    21781 cttttttcgc cccttccatt gtgcggctgt cttcattgta atataccggt gttacaccac
    21841 gatataacgc acaaaggttt aatgcttttt ggttacgaga catcgcataa atcggtaaac
    21901 ctgagctgat acggctggtt aatttagccg tttcgcctga atgagttaat gaaataattg
    21961 ccgatacacc ttctaaatgg tttgcggtgt acattgcaga cattgccaca gcttcttcga
    22021 tagatttaaa cgtaccttcc atacggtggc gagaaatgtt aatgcttggc attgtttcag
    22081 cacctaagca cacttctgcc attgatttta ccgtttcaac agggtagtca ccgtttgcag
    22141 tttcgccgga aagcattacc gcatcagtac catctaacac agcatttgca acatccatca
    22201 cttcagcacg ggtcggcatt ggttttttaa tcatcgattc catcatttgg gttgcggtaa
    22261 ttaccacacg atttagctta cgagcacggc ggattaaacg tttttgcaca cccactaaag
    22321 ccgcatcacc aatttcaacc cctaagtcac cacgagcaac catcacaacg tccgcaccta
    22381 aaatgatgtc gtccattgct tcttcagtcg caacagtttc ggcacgttca accttcgcta
    22441 caattttcgc ttctaagcct gcttcttttg ctaattcacg tgcataatgt aaatctgcac
    22501 ttgattgagg gaatgaaacc gctaggtaat ccacaccgat tttcgccgct aatttaatgt
    22561 cttctttatc tttgtcggtt aatgcaggag ctgataaacc accacctaat ttgttaatcc
    22621 ctttattgtt tgataacggg ccaccaactg tcacttcagt atgaacttta acgccttcca
    22681 cttccaacac tttcagttga acattaccgt catctaacaa tagaatatca ccaggtacta
    22741 catcatttgg taagtttttg taatctaaac ctacagcttc ttgatggcct tctccacgcg
    22801 gtaaatctgc gtctaaggtg aatttatcac caatatttaa gaaaatttta ccgtctttaa
    22861 atgtcgaaac acgaatttta ggaccttgca aatcgcctaa aatcgcaacg tggcgaccta
    22921 atcttgcagc aatttcacgc actttattcg cacgttcgat gtgatcttca ggaataccgt
    22981 gagagaaatt catacgaacc atatttgcac cggcagcaat gattttttcc aacgtattgc
    23041 cacgatctgt tgcaggtccc attgtacaaa cgatcttcgt tcttctgagt tttctagaca
    23101 ttatttgact ccatcaataa atttaaaaat taagttaaaa tctttctaag catcttgatt
    23161 atgcgttaaa cgagggtcat tatacgccta aatcaagaga gtttaaatac aactaaagga
    23221 gaatgttatg aatatttgga ttatgcgcca tggggaagca ggctttaatg cttcgagtga
    23281 tgctgctcgc tgtttaaccg acaatggtat aaaaaacacc atttcacagg gaaaatggtt
    23341 aggagaacat ttagccaacc aacaaattca attagataaa attctcgtca gcccatacct
    23401 tagggcgcaa caaacgcttg aaaatgtgct tattggtatg caagcggtca attttcccca
    23461 acattttacc aacctcattg aaagttggga cgaggttacg cctgacggaa acccgcatac
    23521 agtagaaagc tatctacatt ttttaagaga ggaaggcgca aaaaatattc ttctgatttc
    23581 acatctccca cttgtgttcg atctcgtcca aattttaacg aataaccaaa gcaatgtaca
    23641 atttccaact tcaaccatag cagaaattaa ttgggtaaag acaaaagctg agctaattcg
    23701 agtaaagcat acttaattct ttcattttta gaatgtcaat ataaaaattt tcaatttttt
    23761 tataaattgt cgaatttata gacttccaaa atacctaaaa aatgcgtatc ataccagccc
    23821 tcaaatcagt actaaactga tccataagct attataagaa agtacggtat ttaccgtact
    23881 ttttatttgg atatccctct ggttaaaatt acttcaaatt tgttaataaa aggttaaaaa
    23941 tgcaaatagg acaatatgca atcaaaaatc gtattttcct tgcacctatg gctggaatca
    24001 cagatcagcc ttttcgccgc ttatgtagcc aacttggagc aggtttaaca ttttcagaga
    24061 tgatgtctac caatcctgat gtatggcata ctgagaaatc acgattgcgg ttagcacacc
    24121 acgatgaaat aggcttaaat gccgtacaaa ttgcaggttc tgatcctgtt gaaatggcaa
    24181 aggctgcaaa gataaatgtt gagtatggtg ccgatattat tgatattaat atgggttgcc
    24241 cggcaaaaaa ggtgaataaa aatatggcag gctctgctct tttacgtaac cccaaattag
    24301 tcgctcaaat attagattct gtagtcaatg ccgttgatgt ccctgtgaca ctaaaaatta
    24361 gaacaggttg ggatcaggaa aatagaaatt gtctgcaaat tgcgaaaatt gcagaacaag
    24421 ccggcataaa agctctcact attcacgggc gtactcgaag ctgtttattt aatggcgaag
    24481 ctgaatatga aagtattaag gcagtaaaag aagcaatttc tatcccagtg atagcaaacg
    24541 gagacattga ctctgcggaa aaagcaaagt ttgttctcga ctataccaaa gccgatgcaa
    24601 tcatgattgg gcgcgctagc tttggaaatc cttggatatt taaggaaatt aatgattttt
    24661 ttgaaactgg attatcttca ccattatcaa ttgataaaaa ataccaatta atgtttaaac
    24721 atattgagga tttgcaccaa ttttatggtg aagaaaaagg ttatcgtatt gcacgaaaac
    24781 atgttggttg gtataccgaa aaattaaatc cggaatcaaa ttttaaacgc acttttaata
    24841 cactaagttc cacaaaagag caactttatg cattagaaga ttttgttaaa tcgattcatt
    24901 tagaatctca attaagaaaa gttggataaa aaaatgttag agcaacaacc tacacaaaac
    24961 ccattaacag taacaatgtt aaatgcacaa gcgcagcagg ttaataaacc acttcgcgat
    25021 aatgtgaaag cagcattaaa aaactattta tctcaattaa atggtgaaga tccaacagaa
    25081 ttatacgaat tagtattatc tgaaatcgaa cacccaatgt tagatatggt gatgcaatat
    25141 actcgcggca atcaaactcg tgcagcaaca atgctaggca ttaaccgtgg cacattacgc
    25201 aaaaaattaa aaaaatacgg tatgggttaa tctaaccgac cgttaaaaca cgattttaat
    25261 tcgtatgtaa ttagttagag ccaacaaaaa acgctgaata tactattcag cgtttttcta
    25321 ttttattttg ccgtctaaaa cttcatttca aatgctaaac tgaaatttct ccccggagcg
    25381 gcaaatcgag tgtaattgct accccggtct tggtttactg cattcacacc ggattggcgc
    25441 actgattccc aagtggaata tttacgatta gtcacattat aaattcctcc acgtaaggtg
    25501 tagtttttat aattgatgta accggtaata tcatgggtgt accaagaacc ggtcagtttg
    25561 ccacctaaat caacgcgatg tatgccgtga tgacgtgtgc ctgccacctc atcggcgttt
    25621 ttggctttag aataggtggt agtaatgcca attccccatt tttcttctgg gtgatcgtag
    25681 ccgaatccaa gcacatagcg tgctggctga atcgcatcta gaataggatc gtttacgcta
    25741 tcgagtcttg agtcggttag tttccgctct tttactttta cacggttata agcaactgat
    25801 gaataaaaac catctggcag catagataaa ataccgtgta agtcaaattt agcgactaaa
    25861 tttatcccgt ttagtgctac atcttgaata ttatggtagt tatagaaaca gtgtgatttt
    25921 tgtattattc ttttacatgc tgtcgcaatc atatttttat agttattacg gaaatagctc
    25981 acatcaaggt aaccaaattg acctttaaag ctaactccaa tctcatgatt agtcgatttt
    26041 tctggctcta actggtggct acgttgcgcg cgttgcacat attcgttatc tttaagccca
    26101 atatgattac gtttaccata aagttcatag aatgcaggca ctctaaaacc gtttgaaatg
    26161 cgataagaaa gcgatacaaa ctctgttggt ttaagcgtaa tcccaccatt ccaagaccaa
    26221 tttcgataag ttcggctaag tgtccacgga tcatcagatt taaatcgatg ttgatcaaaa
    26281 cgcaccccta atcccaaatc cacatactcg cttatcacta gatcgcggaa gctaacaaaa
    26341 tggctatcgc ctttaatttt acgcggttca cagtttaaga tgtcgccgcg tgtattatta
    26401 cacaaagata ccgtttcaat actgcgtgga tcgcggcgat aaatatatgg attatctaaa
    26461 cgccctctac cgcggtagct ggtataaccg cctttggtat attgggcagt catatcccca
    26521 tgatccataa gcgaattaaa tcgatcaaag cccaacccta aattcagttt gtgggtttgc
    26581 ttaaatacgc cttgaccagc atttagcgct ttatcaaatt ctaaatgaat gacacgatgc
    26641 ttttcttggt aattattacg ctcagttcga tacatagacc aagatttatc caaagtcggg
    26701 cggcaatttt tatctaccac aggataatcg ctacaatgca agcgatgtag ccggctatat
    26761 agttcaatat cttgtttatc cgcactgagt ttaatgctat ccaaccagcg attattctct
    26821 ggtttatatt tataggtgaa tcctaaacga cgtttgtggt gacgttcatc aaaaaacttc
    26881 acatggctat agcgcaaccc ataagggatc cttggcttga acactaagcc atctaaaata
    26941 ttatcccctt cataaacata gttcctaagt gataagttaa tatcgtcttt tgtatagtaa
    27001 gctggcgttt gcatatcacg gatatcgtag cgttgttttg tatcttctaa gattgcgcca
    27061 agataatgag acgagttaaa gtgatagcca aacttcataa aaacagaatt actcttgtaa
    27121 tctaaagggt ttggtgcaat gcgatcttta ccggtatatt cttgggctga gagctgctca
    27181 gtgcgataag gaatctgctc aagctgtttg cgctcttcag gcgtatattc cggaaatgtt
    27241 ctcactggga aattatcgcg gttcaactta acccttgcac gaggagtaca atctaatgtt
    27301 gggcaagtat cttccacaat aaaaaaagat cctccaggag cattctgtgc ggaatttggg
    27361 taaagatcgt agcgattttc aaagccggtt atacgccgaa tattatgttt taatttattt
    27421 gcctcggaat gaattttggt ctctttaccg tgtcggtgag ttgcaataac aagtgcttca
    27481 aaaccacccg cctcaccagc cgctgcgata gactgtaaaa aatggctatt tttgctggca
    27541 taagaggtct tactatctaa gccccaatgc tgcccctctt taataatatc ctgcgcatct
    27601 ttagtacgaa aaccaatagc accacctagc gcaccagagc catattccgc agaacttgct
    27661 cctttgctta actcaattga acgaatgttt tcatactcaa tctcattaat tgcaccacca
    27721 ttagcatctg aacctagcgt atgataatgc tgcgcttgtg gtagcccatc aacaagtaag
    27781 ctgacacggt ttttatctac acctcgaatg gcatagccac tacttgcacc gcgaccttgt
    27841 tccaccaccg aaataccagg gtcatagcga gttaaatcac gaataccaag aatttgattt
    27901 ttactcattt cgtgataatt tttcactact ttccccaagc cagttacttc gttttgacgt
    27961 tcgtgagcat aatggctctc tgtcacaata acttcatcca gaacagctag atcgttattt
    28021 tcttctattt ttttattttc agtcgcagca ccgtatgaat gagaaagagc aaataacact
    28081 gttaaggcaa caggtgaata gcgaaaatga tgatatttca ttatcattag atagggtctc
    28141 ctttatttaa attttgcaaa tttttataaa aaattgcccg cttgctatct acaaccagca
    28201 aaggggaatt atgattattt ttctatttga cgttttccgc cgaatgtaat actgactcta
    28261 tctttatccg tttctgcact atgtacaata ccacctaatt ccgtcgcctt agggccataa
    28321 aagccccctt caaattgagt atttatatgc actaccgtgc caccattcgt acttttcgga
    28381 tcaagattaa aaccagaatt gcccgttttg gctgtgcctg caaaaccatt ccctttcaga
    28441 ttgccttcaa gtgtcagcat tgggcgttct tcaacaccat cattagcaat cagcttgcca
    28501 ttaatttttt tattgacaaa atctacatcg aatagtgaac gagtaccact ttcgctgtta
    28561 cttggcgatt cagcccctgc cgagccagat ttactgtaca ttaccccgtc ccaagtacct
    28621 cgatatttta ctgtccctgt tggcaaatct gccacagctg tacgttctcc tactaaatat
    28681 tggtgagcag tatcactatt atttccctcg ctataagtcc caaatttgac ataatctaaa
    28741 ttattacagc agactgaaac tcgatacgtt ttatcatcaa tagtacgggt aaccaaatca
    28801 tcaaatttca tctcggcaaa gctttttttg ccttccgcaa taagtggaat ctgcttattg
    28861 ttaataatca aatgtgtcgc attcccgaaa gtatccatct cagatttatt taaatcttta
    28921 agtttaattt tgaaagcatc aaaggcagat tcactatcat cttttttagc atctcgtttg
    28981 ccagcaaaaa caacaaatac cgacttatca tcagctaaga atttaccggc aagttcttga
    29041 gccttcccac caaaaaatcc accttcaagt gtcgtagagc ttttaccaaa ataaggatca
    29101 tcggtatttt ttgcgtttgc tttaccagaa aagcgattac ctttaatttt tgcatcaata
    29161 tcgtaaattg ttgtaatttt ttgctctttg ctacgactaa catacccatt acgaaccaat
    29221 gttccagtta aagttttatt agcaaaatca gccgtaaatt ctcctgtatg ccccattggt
    29281 ttttcagaat catcaacatt aatatcgtaa ctattttccg gtgtggcgcc aatattgatg
    29341 cctgcggaat tagaaaaata tttactatct ctcccttttc tcgcatcggt agtaaaatcc
    29401 caatatcctt tataagtagc tttttgagta ggtattgctt ttgccggctc tatacctaaa
    29461 tagtaaacat acccatgtgc acctgttctc aaaatttctt taggctttat ttcaggtttt
    29521 gcaccagaat gcagaacata gccggaacga acaaaattaa aatctctagt atacaactta
    29581 tgatttctat catgagtatg gctaaatcca tcagcactac taccgtacgc tttaacctct
    29641 tcttcatacg gaatttttgt cagatctcca gtaatctctt ttatatcacc aataggggct
    29701 acatcttcct tcccctgcgg aaagagatta cgacgcggaa ttttggctga aaaaccaaac
    29761 cccggctgca ataaagcttc agtttcagaa gcgcttactg tacgtcttgc gttactatta
    29821 tcatcttgta aacttggctt tttgggggta gtttgcgttt gagattcaac tttggcagat
    29881 tgaacatcaa agcttccacc atttgaggaa caagcagcaa gtagcgccgc attaagcagt
    29941 acaaaactac t
//
LOCUS       DANLXD010000018        29075 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.018, whole genome shotgun sequence.
ACCESSION   DANLXD010000018 DANLXD010000000
VERSION     DANLXD010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 29075)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29075)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29075
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.018"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..875
                     /locus_tag="PXD18_000644"
     CDS             <1..875
                     /locus_tag="PXD18_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PcfJ domain-containing protein"
                     /protein_id="HDL6301105.1"
                     /translation="WVRSSDKQPFILYAKYQDKMLCESKGQWRWLKKQSRIVVDQCFL
                     HVNQWQLLTEIQIPFKIPVCVICFILTNFSMISSELERSRQRRLLSIFIQYIYHYWKD
                     NGFRQLKVHLSHLRVLFQDIEDYMIHEGYLHGIPQTWKHLVSHSEQWHQHILEEQRRD
                     QHILEEQRRENDEAHQALLSTSWSSPIDICYINEIEFQPLTTGQMLFDEGQRMRHCIF
                     TYIDICSEGRYLAFSVKIANESATLGLIKHRGNWKIEQFRYACNIAVCEPMILAAAQK
                     LCKLLNKQSALPQN"
     gene            971..1603
                     /locus_tag="PXD18_000645"
     CDS             971..1603
                     /locus_tag="PXD18_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301106.1"
                     /translation="MKTKISLIAVFMLGLSGCVHQQNTAQNSDEITPMPDSLLKPQMQ
                     PLPPQDRIVSKDIYHEQTTSNTEVVRDGRYTLISIAPEEGQKYLLEQVVSVKVPNTKN
                     RFTANVQQGLRTTLTNTGLELCFPPIGEQGNAVQTLFTRPLPKVHYQFGPMKLYEALQ
                     MIAGPAYELTLNDITRTICFKARESSFQNPHKPAVAIQRQQLKPRSLRNN"
     gene            1615..2352
                     /locus_tag="PXD18_000646"
     CDS             1615..2352
                     /locus_tag="PXD18_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03759 family integrating conjugative element
                     protein"
                     /protein_id="HDL6301107.1"
                     /translation="MKRNTINIWLAVLSSVTTNALAQTTSIESSTQTLSQQQSQHQQS
                     QLSDSLKQAKEWGLTIEEWNRYTELMKGERGMWSPNLDPLTALGIEARTAEEREKYAR
                     MLAKKYYERVSKELDFDKVYRQEFEKLYPNELPFEVEPHISQSIGRVIYFTRFDNCDS
                     CKSDLSKILSYANSQTPLDIYIVGQNISDNDIRKWAAENNIDPIKVSKKLITLNHDKG
                     YWFQYSLGKMPAAYQIKQDGEWQSLVY"
     gene            2331..3095
                     /locus_tag="PXD18_000647"
     CDS             2331..3095
                     /locus_tag="PXD18_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HDL6301108.1"
                     /translation="MAISRLLIVITLFAVGISDAKSKPFTGFGTEIDSYIRIAAQRYQ
                     ISEPMLRGLIKMEDGWYGNISPTGATGVGQFTVGTWNWLSETERGKQLGMRLITGKNK
                     GTYADPRRDKYTNTLATALLARWHIEQFHLRRIPATDENLYMAHNIGLDSLHRAMMGK
                     ATKEDILNMRRNGMKSWMTVRDFLNYQKGRFLAHKQEANFMLVSKQGHIHTGVSAFVY
                     PTSEMGKSVKWVEPDNKIIWVEPKSAMIWVEPTNTP"
     gene            3104..3610
                     /locus_tag="PXD18_000648"
     CDS             3104..3610
                     /locus_tag="PXD18_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL6301109.1"
                     /translation="MQHKIKMLLLSLCISHSVWGDLTVIADFGGESAVRFYEALQPEH
                     DENAPNYPNSIPASVSEADILPVVSHKLSPGIIETKQFDLTGIQAIFLIGADNTSAQW
                     LQQNREKLITLNATGLVVNVRTLAELNQLREIVPEIIMLPIPGDDLAERIGIAHYPAL
                     ITETGVSQ"
     gene            3610..5814
                     /gene="traD"
                     /locus_tag="PXD18_000649"
     CDS             3610..5814
                     /gene="traD"
                     /locus_tag="PXD18_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system coupling
                     protein TraD"
                     /protein_id="HDL6301110.1"
                     /translation="MSAKHTLEAWLRPPVEFFPAIVHASCAFVSAAAPWSLALHPSIG
                     YSIAAGFGALSFYRAKQGWQIVRYHQNLKRLPNYSMTSKQIPVSNKYLFVGKGFEWKP
                     IHTQRLHDCFSDNGSKYLEPSKLFKMAREYEKRHENWLTRLTSKDSRWNPVRPLPPVE
                     GIPAIHGIEPDEVDVVQSVSSRVGHTVVFGTTRVGKTRLAEVFVTQDIHRGKTPDERE
                     VVVFFDPKGDADMLKRMYAEAKRAGREDEFYVFHLGYPEISARYNPVGRFNRISEVAG
                     RISGQLSGAGNSAAFKEFAWRFVNIVARALVELGNRPNYVQISQFVQNIDSLFLDYAE
                     KFIRKTDPKIWENLATIAAGLDEKALPFGMKDRPLIFVINKYIAESAVFDPILQGLAS
                     AVRYDRTYFDKIVASLLPLLEKLTTGKISELLSPDYADILDERPIFDWESIIRKRGIV
                     YIGLDALSDATVAAAVGNSMFADLVSMAGHLYKFGTNEGLPGDMGRKTKLVKINLHCD
                     EFNELMGDEFIPLINKGGGAGVQVTAYTQTLSDIEARIGSKPKAGQTLGNFNTLYMLR
                     VKEPATAELLTKQLHEVTIKRSTVTSSTTDSSNPDDDKAFSSNTGQRISESTVPMLVP
                     ANITNLPKGQAFALLDGSKLWKIRMPLPAVDKDDMMPQSLRELTDYMRKNYHVVENWW
                     QPAFTEYTPSRDIAEAFEAMSEPQYNSRIDNQVDNFGIDEPYDIDEEENDDE"
     gene            5807..6160
                     /locus_tag="PXD18_000650"
     CDS             5807..6160
                     /locus_tag="PXD18_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL6301111.1"
                     /translation="MSSTKMREENRTNLLDLPNKYRNFDGEFSASCGLDNAEELLIHS
                     QSYFIEWFQQGYSFHQFAEKFAHQGLSLWSADEISMRNTDKSKDVFAFYLAFDHNPSG
                     YILVQCQLDREDSLQ"
     gene            6157..6852
                     /locus_tag="PXD18_000651"
     CDS             6157..6852
                     /locus_tag="PXD18_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03747 family integrating conjugative element
                     membrane protein"
                     /protein_id="HDL6301112.1"
                     /translation="MSEGAKPRRKSGLISLILGKINMLLAAITVSLIFSIILEWVGIA
                     FWWPEEGHLHSQTMMLNEMQWLSDDFSQSLFAKSSTAFATLIIENVYNWLFVYTGIKE
                     WLTSPGNGSMEQWAYHYGRAYIESVIYVVITFIIRLIIIIFTSPLFLLTALSGLTEGL
                     SLRDIRKFGAGRESAYLYHHARRYIMPMMVTAWVVYLSIPFSIHPNFILVPAACLFGL
                     SICITAASFKKFL"
     gene            complement(6882..7241)
                     /locus_tag="PXD18_000652"
     CDS             complement(6882..7241)
                     /locus_tag="PXD18_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301113.1"
                     /translation="MRYLALFPVFLPSIAYPLPQAHKVGDICHAENAPYNYGGLWELS
                     LRGNLVCNYWQFLGDDERKRIESQLDEYGELPLWYSSERETEEDEYPQYWEVEDWDGD
                     DWDIETENEGTNTITDE"
     gene            7439..7765
                     /locus_tag="PXD18_000653"
     CDS             7439..7765
                     /locus_tag="PXD18_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RAQPRD family integrative conjugative element
                     protein"
                     /protein_id="HDL6301114.1"
                     /translation="MSISTSLRKGIVVLVTLSCLPAFASTEQEQLAQAIKQLEAAKLS
                     LQRAEKVAKASPKTREYFNYSAIHRDIETVKKGIQQYINPSRALPRDPNVLRTLSEDY
                     SKLRGQ"
     gene            7765..7998
                     /locus_tag="PXD18_000654"
     CDS             7765..7998
                     /locus_tag="PXD18_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03758 family integrating conjugative element
                     protein"
                     /protein_id="HDL6301115.1"
                     /translation="MSYSPVDAFSAASGIDPFRLKLMIAIIFLSMLLLAVAWALNSGY
                     KGFSFRDKSPFSLLVLFLKGVALLVCVTYFFIY"
     gene            8013..8402
                     /locus_tag="PXD18_000655"
     CDS             8013..8402
                     /locus_tag="PXD18_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2976 domain-containing protein"
                     /protein_id="HDL6301116.1"
                     /translation="MSRIKSLTKHLHSRYLAVMLVFWGTIQHAFAAGPDASKIPDFQI
                     PGVDSNTKDPMEILWIVGKSIITLFAVLLAAGAIFVVVKALISIYNEATSENGKKGWG
                     HFIVALIIGFIVIFFCLWLVKLAVGLF"
     gene            8425..8790
                     /locus_tag="PXD18_000656"
     CDS             8425..8790
                     /locus_tag="PXD18_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03750 family conjugal transfer protein"
                     /protein_id="HDL6301117.1"
                     /translation="MPEQDTTIPFLPTRLNREATVYGGMTVSEFGISAGLGFMLGLIV
                     GLFLWILTDFWLLIPAMAMLLCIATVLIGKGVVAAVKRGKPEAYLNRLIEKKMDDLFN
                     GHKFIRREGFWSIRRYKRK"
     gene            8794..9438
                     /locus_tag="PXD18_000657"
     CDS             8794..9438
                     /locus_tag="PXD18_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03746 family integrating conjugative element
                     protein"
                     /protein_id="HDL6301118.1"
                     /translation="MSQLKSQLHEKDKHIKTTRIFAFLFFIIILVLAGVIYTFPSRLT
                     IYNPPDLRAGSQRAWWEIPKPTIYAFSYQIFQQMNRWMTNGEEDYEKNITALKPFLTP
                     HCEAFLRQDYKDRLRNNELRSRTRMVYEITGRGYSEDKVTVFSEDNWAVNLDLSVDEH
                     FQGQPVKRVYIRFPISIVRMDIDSVKNPWGLGFNCYHSIPKLLEGVEPKTEEKK"
     gene            9438..10319
                     /locus_tag="PXD18_000658"
     CDS             9438..10319
                     /locus_tag="PXD18_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03749 family integrating conjugative element
                     protein"
                     /protein_id="HDL6301119.1"
                     /translation="MKRLPILFASLLISFSGSSFADVLMKWERKPLPIALQVEKERII
                     FVDKNVKVGYPAELDGKLRIQSTGGAVYLKALETFPSTRIEFRDVSTGEIFLFDIVSA
                     TKVANPEESIRMVFDSAVEKQSFSTNRDDEPDLSLTGTRPQLPIPAALTRYAAQSLYA
                     PLRAVEPLEGVRRVAHRLPKKITTLLPAYSIEATPLISWQLDEYVVTAIRLQNKGNSQ
                     ITLDPRELQGQFYAATFQHNWLGGYGGNEDTTTLYLVTEGYANNALIPETHPVKPVGK
                     KVKKTTKVETKPTQSAK"
     gene            10331..11785
                     /locus_tag="PXD18_000659"
     CDS             10331..11785
                     /locus_tag="PXD18_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
                     /protein_id="HDL6301120.1"
                     /translation="MKANKALFVILGIVFTLVGGIVYALFWRSDTPQEPTEQEILDIS
                     IKDLTPEQVRSMGIQGDTPIDTLRTLVTTVKSNERRMDELIDENRQLKQKEDLVNGRI
                     SDAVNNETRKLQEQIADLKMQLFDMATHVNNKSTAQESTPQAEAQPSMTTNKGFGTAG
                     DKLPIGGASMPNVDIGGMYWVEPSDQIGLDAGGKAVSGNTLATKFGFPNDFKGGQTTG
                     NTEKKGLPFFPETDVVTGSQGTTGNSRGKNQITPVYTVPSNSTFLDSVAMTGLIGRIP
                     IDNKVSDAYPFKVLIGRENLIANGIELLDVEGAIVSGTATGDWTLSCVRGDVKSMTFV
                     FNDGRIVSTTNKGNSENIGWLSDSSGIPCVPGERKTNAPEYLGTNFFLAAASAAAQGF
                     SQSQTTTVVDGNSVVGAVTGDQGKFILGQAIGGGLKESADWFRKRFAENFDAVYVPPG
                     HRVAIHIEKEIEIDYNSKGRKVKYGNTSTNTQLD"
     gene            11798..12196
                     /locus_tag="PXD18_000660"
     CDS             11798..12196
                     /locus_tag="PXD18_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03751 family conjugal transfer lipoprotein"
                     /protein_id="HDL6301121.1"
                     /translation="MKALYCIMMSALLITGCTTSTEELLPANGSTMRDIWDKGAGNND
                     LHLYRSQQGRTLDPVDYIPNTEQRAYTRTAENEINNLFPRLPNPDLIMYVYPHQTRSG
                     EPLSIPGYSTVLPFYGRVQYAQPGDRTRGL"
     gene            12196..15033
                     /locus_tag="PXD18_000661"
     CDS             12196..15033
                     /locus_tag="PXD18_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer ATPase"
                     /protein_id="HDL6301122.1"
                     /translation="MMSFLSEVFSSFKPTKTEVISSEPNENSGESDIIQNKMSEVNGE
                     VQPLKRSGKLTLSQHHRRLYSQAPSFIDHLPWGEYLNQHGVILLDDARSVGAVFDIKP
                     IGTAGRSIEFLSRIRNLVKDALQDSFDELDINPYVVQFYCQDSDDLQPYIDQLRNYIS
                     PIAQNSAFSEEWLRVQAKHFKDIGKPEGLFIDDRVTNTAWSGRIRSTKMVIYRYVDKS
                     NDSNENLIIEQLNNACSRINGALTTAGLQLQRLDGEQIRQWLLRWFNPNPSINFEGLS
                     NNDCYHLFGKQTSNDDLPLAFTDFSEDLFYSQPRNEGSYWYFDGQPHEVVVVNNLRKQ
                     PEVGLMTGEITRGRNINALFDLLPESTIMAITIVIHPQDKLEAHLEKISSRAVGENFE
                     SKYLKEDCQTVQAYLKEGHKLYQAAIAFYVRGKDEKELRTRSRQLRTILLSNNLEPVK
                     ENAEIAPLNSYLRWLPMNFNPQMDAKSHYYTKYYFVQHLANLLPIFGRDTGTGNPGIT
                     YFNRGGAPFNFDPFNRKDRTKNAHKLLLGPTGSGKSATLCGQLCQAMAVYRPRTFVVE
                     AGNSFGLLADYAERFGLTVNRITLAPNSGIVLPLFSEAHRLLDMELNPEDVPEDIEDN
                     DDTDDEGDMQRDLLAEMELTARLMITGGEKKEDEKMSRADRAAIRRAILNAARQTKSE
                     GRQTLTEDVKKALEAISRDENTREERRTRLAEMAESLEMFCTGVNGQFFNREGEIWPE
                     ADLTLVDLAMFAREGYEAELAISYISLINHINSLGEKYQHSDRMILNVTDESHIITAN
                     PLLAKFLVKGSKMWRKLGIWLWLATQNMDDFPNEAAKLLSMVEWWELLNVSASEIDEI
                     NRFRKLSEAQKTMLLSAKKSDRKYTEGVVLATNMEALFRVVPPSLFLALGMTEKHEKA
                     ERRQLMMQHGYSELDAALEVAARIDKARGIA"
     gene            15033..15461
                     /locus_tag="PXD18_000662"
     CDS             15033..15461
                     /locus_tag="PXD18_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301123.1"
                     /translation="MMKQHYRLFNVGPQKSSLGIVSSAVETQLLGFCEQIRQLIGIGK
                     QITLFPHRVVQNHWAIELSGEKGSVHLLLNVTGRSLLPTSNYREWPARLVIEIADHVD
                     AYWFATFLAQQLDLKSNLFFLSTSIVDNSMHNEVTDTNEA"
     gene            15451..15768
                     /locus_tag="PXD18_000663"
     CDS             15451..15768
                     /locus_tag="PXD18_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL6301124.1"
                     /translation="MKPDTTMPKMKKVRAVLKTTLIIIGIILLLLIVGWLAMTYFPTT
                     NFQAWFYETRYAWLGWRFVLYGVIWFLMVKLNRRGQMPLKARLMILSAIPLIEGINLL
                     YLL"
     gene            15779..17296
                     /locus_tag="PXD18_000664"
     CDS             15779..17296
                     /locus_tag="PXD18_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HDL6301125.1"
                     /translation="MTFTVDSYLEYFLTLLAWIINNNIFAVLVQTGLFILPLIFVLIG
                     TWMEVKKQGEDEGNKGDLLITWLSLKFYPAMFVVVLVLAPMIPINLNNIELNVERSKA
                     CGYRIPTSPEDSGYNQMNSELGNQQARVPLWWGLFHQINKGVTHALTASIPCKPDLRQ
                     VRFEVQHEKINNPALLTEVRLFVQQCYVPARQKIQSSQLSLTPAQVRETSWLGGRILL
                     TNSELYPRYRAQQPHSLFPYNASRDNGLPNNGEGGFPNCAEWWDTANTGLKDRLLADV
                     KQNFSAKVIDFFSSKENADESILRTVLRAENMDISRGKVYPGYGGNLDPTFANATTRL
                     TSSVGSLAASFAAFPAFDAMRQALPMVHAFMLMAVIIITPLVIVMSGYSLKTLVTLTF
                     VSFALVSLTFWWELARWLDSWLLSALYDSSAHSRINPYFLENTQDDFIVNFVMGSMFL
                     VLPAIWLGSMSWAGVKIGDIAAGFTTDSLDSKSAGSQGGNLVKKGGKEISAGFNK"
     gene            complement(17349..17729)
                     /locus_tag="PXD18_000665"
     CDS             complement(17349..17729)
                     /locus_tag="PXD18_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301126.1"
                     /translation="MKFIDFGKQLAKPVKFIKQRTAFLPKPLQQAVVFAVIFAGLPLF
                     LVGFTVLRILNGTPVEDISTNDVAYNPNHVENTVNEIEDDSEDSKPEDLWDVIADQDE
                     NQLDGYRDGYFGYGLYQGGYFVKR"
     gene            complement(17753..18418)
                     /locus_tag="PXD18_000666"
     CDS             complement(17753..18418)
                     /locus_tag="PXD18_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4852 domain-containing protein"
                     /protein_id="HDL6301127.1"
                     /translation="MCKKAFPLWGLIFGLLLSTSAFSVSKNFNYQNILMESLHFSENI
                     ELSSLSKDWLLYSDRNTYHKYQNDEFEFQDKIEQAGKKLQKLVDDRKSEEAPIVFTIP
                     VNSEFGNYDFEQGKFEYQPLMNGHMYISSNQYTENLPRKINLYVSNPEFIDGIPMGKD
                     KAKEFLQKRKNSLGNINRSVILYVDVQFEKAEGLDNLTGKVLSYSVKDNKDKVIYSSR
                     QKQ"
     gene            complement(18637..18882)
                     /locus_tag="PXD18_000667"
     CDS             complement(18637..18882)
                     /locus_tag="PXD18_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301128.1"
                     /translation="MTNDGSIIARGSGFTTYALELENDGLKYLVGFVQPNGNAKEFIE
                     PGATIRRSNDQPSIGSVDCDPRKKIHYKFDVHLMNTL"
     gene            complement(19091..19414)
                     /locus_tag="PXD18_000668"
     CDS             complement(19091..19414)
                     /locus_tag="PXD18_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301129.1"
                     /translation="MKNNFGYWLGRKIRAFKEWNHPTFLKYTYIILFLLITYQLRLWL
                     YAVFGAVISLIGIVLLADFMHENNAITQRRNILNELKEIKKLQENDCIKENLTGSHNG
                     TGNGC"
     gene            complement(19427..19921)
                     /locus_tag="PXD18_000669"
     CDS             complement(19427..19921)
                     /locus_tag="PXD18_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL6301130.1"
                     /translation="MLSGLKIESFSKEFKRDCFDSESELLNQYLKTQVSQDIKRRITS
                     CFLAVNSEQTVVGYYTLASTSLSLSDLPITLQRKLPRYPTVPAVLLGRLAVDKRVKGL
                     GLGQALLGNALKRVLRADIAAYALIVEAKDESAVNFYRKFGFIDFENEARKLFFPLDR
                     VRLS"
     gene            complement(19921..20193)
                     /locus_tag="PXD18_000670"
     CDS             complement(19921..20193)
                     /locus_tag="PXD18_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HDL6301131.1"
                     /translation="MATATARFEARMSQEVHMLLKRAASLEGRSLSDFVVGAALSAAR
                     KTVEQNDIIRLSVNDQELFAKALIDPPEPNLAMQKALALSSQILGE"
     gene            complement(20352..20780)
                     /locus_tag="PXD18_000671"
     CDS             complement(20352..20780)
                     /locus_tag="PXD18_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301132.1"
                     /translation="MRKLLVITALTLCTTPVFAADKNVIFSCTSTEGKPLTVKRVGND
                     YEYSYDKTTFKNPIKKAVTNDGSIIARGSGFTTYALELENDGLKYLVGFVQPNGNAKE
                     FIEPGATISQSKEQPSIGSVDCDTRKKSHYKFDVHLMNTL"
     gene            complement(20801..22807)
                     /locus_tag="PXD18_000672"
     CDS             complement(20801..22807)
                     /locus_tag="PXD18_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL6301133.1"
                     /translation="MKSQFKFKKTHLLVITVLFSSTSSISFADSITDKLEFSKSDSII
                     SDRVFYQIGGGTGYMAPPSRGNTKVVDLGIGWKANLTCGNFDIKTTIKNDLNGLKDGF
                     KDLMGNVIDSAKGAVASMPAMILQRANPQLYDLLTNGMYQGKLDFNRLKTSCEEMSKV
                     LADHTLGGKWGQAADLESYKQITSTQPDAKQAQKDLEDKKGKDGRVWVGGQRKGGQNQ
                     DPINVVGDVAKGGFNLLNKRNVLDSSPVSNCEGNLCQTWDTPQAAADFLTKIIGEQSI
                     STCKEDCGTKTSSKAGVGLSPEIEEEHIRTIVKLENVLNMDVPKSELLAELSSSSVPV
                     TRGLIESLRDDPDVELLSQRLSAEIATSKVMEKMLLARRAILAGMREPNVAQNADAQV
                     ELERVLNIIDREISQVKLEMDMQKMITGNTASVILQSKSEREALAGAHSLSQDSLDKR
                     VQGLENGNVALTDLETGSNINLSRRNIALSIPNIPNVAALIPTLPNRGGSGVGGNFPS
                     LAQISGSTMDQATGLLRNFEGFISKAQWDVNAHRVGYGSDTITRADGTVVKVTKDTVI
                     TKEDAERDLARRTAIFANNVRQELGDSHWNALPANAQAVLVSYAYNYGSLAKTKSVLD
                     AARRSAQTGDMTALATAVRNRQVDNNGINARRRNQEADYILGKN"
     gene            complement(22822..23763)
                     /locus_tag="PXD18_000673"
     CDS             complement(22822..23763)
                     /locus_tag="PXD18_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03756 family integrating conjugative element
                     protein"
                     /protein_id="HDL6301134.1"
                     /translation="MKRAFFSVLLSVSLAVPTTLYPQQVKASLNTASIAASSASTSCL
                     DYKVVGTCFWLFCTYFGCKVRTSTKIKHYLPEMVVSSYNQDGQTPWTELQSLNPGVKG
                     GEYRSPQRQYSQLTFKNADAFGHPQGAIGQLLGSTGYYCKSQTTPFIPYFLSGLDFFA
                     WRENMPEMFYPEALIPGMREVGRVGDSWGNIYPRSGWVTQAHDYKASATIVQRVADIV
                     TRTAQPHIYFPAAKKGGVGEWPPGPVEEGQARTHKWQMLYPQMSNTCSVFPNGGQTDT
                     YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSIDWSH"
     gene            complement(23760..24203)
                     /locus_tag="PXD18_000674"
     CDS             complement(23760..24203)
                     /locus_tag="PXD18_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03757 family integrating conjugative element
                     protein"
                     /protein_id="HDL6301135.1"
                     /translation="MKASRFLGYFSIVTVVFSVVAQAQPNIIVYTTKMYPIQNSQLAS
                     QVYYLDQVENFEEEISRNLSKSPEIAEREIRAFFNSADWKAQEEQLKDAYQGVISGWQ
                     NGIKKVPAVFFNNLQSSPSVIYGMTDIQKALDEWHKWVQQHGESK"
     gene            24578..24931
                     /locus_tag="PXD18_000675"
     CDS             24578..24931
                     /locus_tag="PXD18_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301136.1"
                     /translation="MSQQTAGWDVIPFESSKTAKPSLFWKLGNKLGNIFVSAKHKAKS
                     KYVEVTKGINQRIAEEDEMRALELQMCLDEQAAEYEQEISRIKRKMFFRALFVAIIAF
                     LCGMATVFGTQLSLI"
     gene            25003..25248
                     /locus_tag="PXD18_000676"
     CDS             25003..25248
                     /locus_tag="PXD18_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL6301137.1"
                     /translation="MSVHIKLSCVGDILPIKLNEWTPEHRALHHEISHKALEAWQNRD
                     KGTQSVRFMQQMPARQGLHFRFLSVSEQDGKLIVSRS"
     gene            25257..25499
                     /locus_tag="PXD18_000677"
     CDS             25257..25499
                     /locus_tag="PXD18_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301138.1"
                     /translation="MFGKLFYKMNPKVLAKIGEDFRKAGYLMGAGFVGMVISNDQIST
                     SEGFVLFLWGLYIWIIGHIALHHSEKILNSKQGEPK"
     gene            25763..26605
                     /locus_tag="PXD18_000678"
     CDS             25763..26605
                     /locus_tag="PXD18_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301139.1"
                     /translation="MSDSVLNTYFKHALVKAGFPDTLDMEYSLSHCQGDGVAFYGRLG
                     TDDLIQLFNHLNPQKRKQKMFANLLTHIESWETHDDIGFEIIRNRFGYRYSHWNTMEL
                     YAKTADQLVFFNDSDARRNWYFPTSKVDKYKALWDGFIEDLEQYIKDISREMESVGYQ
                     IIEASPYQTETVFKFNTEKYLVELQRKPSEFYSELVDWAFGDMCDFEAAIEQICQGQL
                     CYADFEATVTDKKSEIQLGLARLSGISYSPNDRSFSGYRQELIGEAIASARHNAARFA
                     YLHA"
     gene            26720..27133
                     /locus_tag="PXD18_000679"
     CDS             26720..27133
                     /locus_tag="PXD18_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL6301140.1"
                     /translation="MKNEHNLEQLKYIWDNRNLENKVYQYLFHICIEPMKKGDWNRYT
                     IWLNFHGNLINVSDVVYRVVESQKLKDDIKIWYDKQYYCRPTKVETTGFISIFLHLFY
                     EGIARILLEQGMITETEAAEKSYNFRAANCFQRLL"
     gene            27147..27302
                     /locus_tag="PXD18_000680"
     CDS             27147..27302
                     /locus_tag="PXD18_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301141.1"
                     /translation="MEPRTVKVIYDDGDYFFTLINADEQTIRNYYAIGSSIGFDNTRK
                     IVAVEIL"
     gene            27382..28365
                     /locus_tag="PXD18_000681"
     CDS             27382..28365
                     /locus_tag="PXD18_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HDL6301142.1"
                     /translation="MNPQSNTQPKFDLYQEVTDKIIAALEQGTAPWLKPWDSVIPYGG
                     MPCNAISGRLYSGINVLLLWLSAAEHGYIQRKWITAKAAIEAGGHVRKGEKATLAVSY
                     RPYDREKTDDDGNLVLDDDGNPVIEHLASIKKHCLFNIEQCEKLPQDWYETVETPEQL
                     TDENQYAIFEEIRLMLKGMDLQVMVKPSNQAYYHPRNDHIVMPEMKQFHSPQKFHSVL
                     LHEMTHATGHQSRLARDGIVSGKARFGNKVYAFEELVAEMGCAFLCSHLGFADVPQNA
                     SYIESWIKVLREDKRAIFRASGKAREACQYMLDALNIAQLADKYEVFEEAA"
BASE COUNT         8781 a         5638 c         5865 g         8791 t
ORIGIN      
        1 attgggtaag aagcagtgat aaacagccct ttattttgta tgctaaatac caagataaga
       61 tgttatgtga atcaaagggt caatggagat ggttaaaaaa acagtcgaga atagttgtag
      121 atcaatgttt tctacatgtt aatcaatggc agttactaac agaaattcaa attcccttca
      181 agatcccagt atgtgtcata tgtttcattc ttactaattt tagtatgatc agcagtgaat
      241 tagaacgttc tagacaacgt cgattacttt ctatttttat tcaatatatc tatcattatt
      301 ggaaagataa tgggtttaga caattaaagg tgcatctttc tcatctgaga gtgctttttc
      361 aagatattga agattacatg atacatgagg gatatttaca tggtatacct cagacttgga
      421 aacatttggt ttcacatagc gaacaatggc atcaacacat attagaagag caacgaagag
      481 atcaacacat attagaagag caacgaagag aaaatgatga ggctcaccaa gcacttttat
      541 ctacatcttg gtcatctcca attgatattt gctatatcaa tgaaattgaa tttcaacctt
      601 tgacgacggg acaaatgtta tttgatgaag gacaacgtat gaggcattgt atttttacat
      661 acatagatat ctgctcagag gggagatact tagctttctc cgtaaaaata gccaatgaat
      721 cagctacttt aggattaata aaacatagag gaaactggaa aattgaacaa tttcgttatg
      781 cctgtaatat tgcagtttgt gagcctatga ttttagcagc agctcaaaaa ctatgtaaat
      841 tacttaacaa acaatcagcc ttacctcaaa attaatttta tctcccaatc aacaatagaa
      901 taaatcattc aaaatcagca atgacttcgc catagttggc ttagattcct ttcacacttg
      961 gagagattaa atgaaaacaa aaatatcctt aattgctgtt tttatgcttg gtttaagtgg
     1021 ttgtgttcat caacaaaata ctgctcaaaa cagtgatgaa atcacaccta tgcctgattc
     1081 attactaaaa cctcaaatgc aaccattacc tccacaagac cgtatcgtgt ccaaagatat
     1141 ctaccacgaa caaactacct cgaataccga agtagtacgt gacggacgtt acaccttaat
     1201 cagtattgct cctgaggaag gacaaaaata tctgcttgaa caagtggtat cggtaaaagt
     1261 gcctaatact aaaaatagat tcacagccaa tgttcagcaa ggcctccgta caacattaac
     1321 caatacaggg ttagaactgt gctttccacc aataggtgaa cagggcaatg cagttcaaac
     1381 gctttttact cgcccacttc cgaaagtcca ttaccaattc ggtccgatga aattatatga
     1441 agctctacaa atgatcgcgg gaccggctta tgaattaaca cttaatgata ttactcgtac
     1501 gatttgcttt aaagctcggg aaagctcatt ccaaaatcct cataagcctg ctgttgctat
     1561 tcaacggcaa caattaaaac cgaggtcatt gaggaataat tgagggaaac tccaatgaaa
     1621 cgaaatacta tcaatatatg gttagccgta ctctcttcag tgactacaaa tgctcttgct
     1681 caaactacat caatagaaag tagcacacag accttatcgc aacagcaaag ccaacatcaa
     1741 caatcacaat taagtgatag cctaaaacag gcaaaagagt ggggattaac cattgaagaa
     1801 tggaatcgct acaccgaatt aatgaaaggt gagcgtggta tgtggtcgcc aaacttagat
     1861 cctcttacag cattaggtat tgaagcaaga actgctgagg agagagaaaa atatgctcgt
     1921 atgttagcaa aaaaatacta tgaacgtgtg tccaaagaac tggattttga caaagtctat
     1981 cgtcaggagt ttgagaaact gtatccaaat gaacttcctt ttgaagtaga accacacatt
     2041 tcacaatcca taggtcgagt gatttatttt acacgttttg ataattgcga ttcttgtaaa
     2101 agtgatctca gtaaaatcct ctcttatgcc aatagccaaa caccgcttga tatctatatt
     2161 gtagggcaaa acatttctga taatgatatc cgcaaatggg ctgctgagaa taatattgat
     2221 ccgattaaag tgagtaagaa actgattaca cttaatcatg ataagggtta ttggttccaa
     2281 tattcattag gtaaaatgcc ggcagcgtat caaataaaac aggatggtga atggcaatct
     2341 ctcgtttatt aatcgttatc acgctatttg cggtcgggat aagtgatgct aagtcaaaac
     2401 cttttaccgg atttggtaca gaaattgata gctatatccg tatagcagct cagcgttatc
     2461 aaattagcga accgatgcta agagggctaa taaaaatgga agatggttgg tatggcaata
     2521 tctcacctac tggtgccaca ggtgtagggc aatttactgt gggaacgtgg aattggctat
     2581 ctgaaacaga acgtggtaag cagcttggta tgcgtttaat taccggtaag aataaaggta
     2641 cttatgctga tcctcgcaga gataaataca ccaatacgtt agcaacagcg ttattagctc
     2701 gatggcatat tgaacaattc catttacgtc gcattccggc aacagatgaa aatttatata
     2761 tggctcataa cattggttta gatagtctgc atcgagcaat gatgggaaaa gctaccaaag
     2821 aagatatctt aaatatgcgt cgcaatggaa tgaaaagttg gatgacagta agagatttcc
     2881 tcaattatca aaaaggacgc tttttagcac ataaacaaga agccaatttt atgttggtct
     2941 caaaacaggg gcatattcat actggtgttt ccgcctttgt ttatcctaca agtgaaatgg
     3001 gaaaatcagt aaagtgggtt gagccagaca acaaaataat ttgggttgaa cctaaaagtg
     3061 caatgatttg ggtagaacct acaaatacgc catagaggta aaaatgcaac ataagataaa
     3121 aatgctattg ctcagtttat gtatatctca ttccgtttgg ggcgatttaa cggtaatcgc
     3181 tgatttcggc ggtgaaagtg cggtacgttt ttacgaagct ttacaaccgg aacacgatga
     3241 gaatgcaccg aactatccga attctattcc agcttcggtt agcgaagctg atattctacc
     3301 tgtagtctct cataaactgt ctcctggtat tattgaaaca aaacaatttg atttaacagg
     3361 aatacaagcg atttttttaa ttggagcaga taatacctca gctcaatggt tacagcagaa
     3421 tcgagaaaag ttgatcacgt taaatgccac tgggcttgtt gtgaatgtcc gaacattagc
     3481 agagctgaat caattacgag aaattgtgcc agaaataata atgctaccaa tccccggaga
     3541 cgaccttgca gaacgaattg gtatcgcaca ttaccctgcc ctgattactg aaaccggagt
     3601 ttcacaataa tgtcagctaa acataccttg gaggcgtggt tacgccctcc tgttgagttt
     3661 tttccggcaa ttgttcatgc ttcttgtgct tttgtcagtg ctgctgcgcc ttggtctcta
     3721 gcactccatc caagtatcgg ctatagtatt gcagccggtt tcggtgcgtt gagtttttat
     3781 cgagcaaaac aaggatggca aattgttcgt taccatcaaa atctgaaacg tttaccgaat
     3841 tattcaatga cgagtaaaca aattccggtc agtaataagt atctatttgt cggcaaggga
     3901 tttgaatgga aacctattca cactcaacgg ctacacgatt gtttttcgga taacggttca
     3961 aaatatctgg agccttctaa gctatttaaa atggctcgtg agtatgaaaa acgccacgaa
     4021 aattggctaa cacgtcttac ctcaaaggat agccggtgga atccggttag acctctgcca
     4081 ccggttgagg gtattcctgc tatccatgga attgagccgg atgaagttga tgtcgttcaa
     4141 tccgttagct ctcgggttgg gcatacggta gtattcggta caacacgtgt cggtaaaact
     4201 cgtttagctg aggtctttgt tacccaggat atccaccgag gcaaaacacc ggatgagcgt
     4261 gaggttgttg tctttttcga tccgaaaggc gatgccgata tgctcaaacg aatgtatgca
     4321 gaagcaaagc gagctggaag agaagatgag ttttatgttt tccatttggg atatcctgaa
     4381 atttcggctc gctataaccc agtgggacgt tttaatcgta tatcagaagt cgctggacgt
     4441 atttcaggac aactcagtgg agccggtaac tcagcggcat ttaaagagtt tgcttggcga
     4501 tttgtcaata tagttgcacg tgcattagtt gaattaggaa atcgtccaaa ctatgttcag
     4561 atttcccaat ttgtacaaaa cattgattca ttattccttg attatgcgga aaaatttatt
     4621 cgtaaaactg accctaaaat ttgggaaaat ttagcgacaa tagccgcagg attagatgag
     4681 aaagctcttc cttttggaat gaaagatcgc cctctaattt ttgtgatcaa caaatatatc
     4741 gctgaaagtg cagtgtttga cccgatttta caaggactcg ccagtgccgt gcggtatgac
     4801 cgtacctatt ttgataaaat tgttgcttcg ttattgccgt tattggagaa attaacgacc
     4861 ggaaaaattt ccgaactttt atctccggat tatgccgata ttttggatga acgccctatt
     4921 tttgactggg aatccattat ccgtaaacga ggaattgttt atattggttt ggatgctctc
     4981 tccgatgcta cagttgctgc cgcagtcgga aacagtatgt ttgcggattt agtatcaatg
     5041 gcaggtcatt tgtataaatt tgggacaaat gagggattgc cgggtgacat gggcagaaaa
     5101 accaaactgg tgaaaatcaa tcttcattgt gatgaattca atgaattgat gggcgatgaa
     5161 tttatccctc tcatcaacaa aggtggtggt gccggagtac aagttactgc ttatacgcaa
     5221 acgctctccg atattgaagc ccgtattggc agtaaaccga aagcgggaca aaccttaggt
     5281 aactttaata ccctatatat gctcagggta aaagaacccg ctacggcaga attgcttaca
     5341 aaacagttac acgaagtgac gattaagcgt agcacggtca cgtccagtac gactgactcc
     5401 agtaacccgg atgatgacaa ggcatttagc tcaaatacag ggcagcggat tagtgaaagt
     5461 actgttccta tgctggttcc tgccaacatt accaatttac caaaaggaca agcattcgct
     5521 ttactggatg gtagtaaatt atggaaaatt cggatgccgt taccggctgt cgataaagat
     5581 gatatgatgc ctcaatctct acgagagctg acagattata tgcgtaaaaa ctatcacgtt
     5641 gtcgaaaatt ggtggcaacc agcatttaca gaatatacgc cgtcccgaga tattgcagaa
     5701 gcttttgaag cgatgtcaga gcctcaatat aactcacgga tagacaatca ggtcgataat
     5761 ttcggcatag atgaacccta tgatattgat gaagaggaaa atgacgatga gtagtaccaa
     5821 aatgagagaa gaaaatagaa ccaacctctt agatttaccc aataaatacc gtaattttga
     5881 tggcgagttt tcagcttctt gtggactaga caatgccgaa gagctcctta ttcatagcca
     5941 atcctatttt atcgagtggt ttcaacaagg ctactctttc catcaatttg ctgaaaaatt
     6001 tgcacatcaa ggactttcat tatggtctgc tgatgaaata tctatgcgta atactgataa
     6061 atctaaagat gttttcgctt tttatcttgc atttgatcat aatccttctg gctatattct
     6121 tgttcaatgt cagctcgatc gggaggatag tctgcaatga gtgaaggagc taaacctcgt
     6181 cgaaaatcag gtttaatcag cctgattttg ggaaaaataa atatgttgct tgctgcaatt
     6241 acagtatctc tcatattcag cattatttta gagtgggtag gaattgcgtt ttggtggccg
     6301 gaagaaggac acttgcatag ccaaacgatg atgctcaatg agatgcaatg gctatcagat
     6361 gatttctctc aaagcctgtt tgccaaatct tctactgctt ttgcaacatt gattatcgaa
     6421 aatgtctata attggttatt tgtttatacg ggtattaagg agtggctaac ttcaccgggt
     6481 aacggtagta tggaacagtg ggcatatcac tatggtagag cctatattga gtctgttatt
     6541 tatgtcgtga tcacctttat tattcgcctc attattatta tttttaccag tcccctcttt
     6601 ctattgaccg cactttctgg tttaaccgaa ggattatcat tacgggatat tcgaaaattt
     6661 ggtgccgggc gggaatcagc ctacctatac caccacgcta gacgttatat tatgccgatg
     6721 atggtaacag cttgggtagt ttatttgtct atcccgtttt cgattcaccc taacttcatt
     6781 ttagtccctg ctgcctgttt atttggtttg tccatctgta taactgcagc gagcttcaag
     6841 aaattcttgt aaagataata agcctcagta atatactggg gctattcgtc tgttatagtg
     6901 tttgtccctt cattttctgt ttcaatatcc caatcatctc catcccaatc ttcgacttcc
     6961 cagtattgtg gatattcatc ctcttcggtc tctcgttcag agctatacca aagaggcaat
     7021 tccccatatt catccaattg tgactctatg cgttttctct cgtcatcacc cagaaattgc
     7081 caataattac agactaaatt tcccctcaaa cttaattccc aaagaccacc gtaattatat
     7141 ggggcatttt ctgcatggca gatatctccc actttatgtg cctgcggaag agggtaagca
     7201 attgatggga gaaatacagg gaatagagct aaatatctca tctggtatct catggtaaag
     7261 cgtgaatact caactttaat actaacttat taagtaacac tgacacagtt gaatatcttt
     7321 ctaaccattt aatattttgt gcaatttctc ttctgattgg taacagagtt ttccattaaa
     7381 ttttaggatc gcttttggca ctcttaactt gaagtaaaac taaaaataga ggtgcactat
     7441 gtctatttca acatctttaa ggaaaggtat tgttgttctt gttaccttat cttgcttgcc
     7501 ggcatttgct tcaacagaac aagagcaatt agctcaggca attaagcaac tggaagcggc
     7561 taaattatca ctccaacgag cagaaaaagt ggctaaagcc tcgcctaaaa cacgagaata
     7621 cttcaactat tctgccattc accgtgatat tgaaaccgtc aaaaagggaa ttcaacaata
     7681 tatcaaccca agcagagcat tacctcgtga tccgaacgta ctacgtactt taagtgaaga
     7741 ttacagcaaa ctacgggggc aatgatgtcc tattcccctg ttgatgcatt ttctgcagcg
     7801 agtggtatcg atcctttcag attgaaactc atgatagcta ttattttcct ttcaatgctg
     7861 ttactagcag tcgcttgggc cttaaatagt ggctataagg ggttttcatt tagagataaa
     7921 agtccttttt cacttttagt tttatttctc aaaggagtag cactattagt ttgtgttact
     7981 tatttcttta tctattagat tcgaggtcta ttatgagccg tattaaatct cttacgaaac
     8041 atctgcatag tcgttattta gctgtaatgc tcgtattctg gggaactatc caacatgcgt
     8101 ttgcagccgg tccggatgca tccaaaatcc cagacttcca aattccaggc gtggatagta
     8161 atactaaaga tccaatggaa attctttgga ttgtaggtaa aagtatcatt accttatttg
     8221 cggtattact tgccgccggt gccatttttg ttgtcgttaa agccttgatc agtatctata
     8281 acgaagcaac ttctgaaaac ggcaagaaag gctggggaca ctttattgtt gctttaatta
     8341 tcggctttat tgtgattttc ttctgcttgt ggttagtcaa acttgcagtc ggactcttct
     8401 aattaaaatg tctaggagac caatatgcca gaacaagata caaccattcc ttttttgcct
     8461 actcgcctca atcgagaggc taccgtttac ggcggtatga cagtgagcga attcggcata
     8521 tctgctggat tgggatttat gttaggtctg attgttggtc tcttcttgtg gatattaact
     8581 gatttttggc ttcttattcc ggcaatggca atgttgctct gtatcgcaac cgttttaatt
     8641 gggaaaggtg ttgtagccgc tgttaagcga ggaaagcccg aagcctactt aaataggtta
     8701 attgaaaaga aaatggatga cctctttaac ggtcataagt ttataagacg agaagggttt
     8761 tggtctattc gccgatataa aaggaaataa caaatgagcc agttaaaaag ccaattacac
     8821 gaaaaagata aacatatcaa aacgactcga atttttgcct tcctgttttt cattattatt
     8881 ttggtgctcg caggcgtgat ctacacattc ccaagtcgcc ttacgatata caacccacca
     8941 gatctacgag cagggagcca acgagcttgg tgggaaattc ctaaaccaac aatttatgca
     9001 ttttcttatc aaattttcca gcaaatgaat cgttggatga caaatggcga agaggattac
     9061 gagaagaata ttaccgccct caaaccattt ttaacaccac actgtgaagc atttttacga
     9121 caagattata aagatcgtct ccgtaacaat gaactacgta gccgaactcg tatggtatat
     9181 gaaattaccg gtcgaggcta cagtgaagat aaagtgaccg tatttagcga agacaattgg
     9241 gccgtcaatc ttgatttaag cgtagatgaa catttccaag gacaaccggt aaaacgagtc
     9301 tatatacgtt ttcctatcag tattgtgaga atggatatcg attcagtcaa aaatccttgg
     9361 ggattagggt ttaactgcta tcactccatt ccaaaactct tagagggcgt tgagccaaaa
     9421 acagaggaga aaaaataatg aaacgtctac caattttatt cgcttcttta ctaataagct
     9481 tctctgggag tagctttgct gatgtcttga tgaaatggga aagaaaaccc ttgcctattg
     9541 cattgcaagt ggaaaaagaa cgaatcattt ttgtcgataa aaatgtcaaa gttggctatc
     9601 cggctgaatt agatggcaaa ttacgcattc aatcaacggg tggcgcagtg tacttaaaag
     9661 ccctagagac attcccttct acccgtattg aatttcgtga tgtttctaca ggtgaaattt
     9721 tcctctttga tattgtttct gcaaccaaag tagctaatcc ggaagaatca atacgaatgg
     9781 tatttgatag tgcggtagaa aaacaatctt tttcaacgaa tagagatgat gaacctgatc
     9841 tatctttgac cggcacacga ccacaattac cgataccggc agcattaacc cgttatgccg
     9901 cacaatcact ttatgcgcca ctgcgtgcag ttgagccttt agaaggagtt cgtcgtgtag
     9961 cacatcgact tccgaaaaaa attaccacat tgctccctgc gtattcgata gaggcaacac
    10021 ctttaatcag ctggcaattg gacgaatatg tagtcacggc tattcgtcta caaaacaaag
    10081 gtaatagtca aattacactc gatcctcgag aacttcaagg acaattttat gctgcaactt
    10141 tccagcataa ttggcttgga ggatatggag ggaatgaaga taccacaacc ctgtatttag
    10201 tgacggaagg ctatgctaat aatgcgctta ttccggaaac tcaccctgtt aaacccgtcg
    10261 gtaagaaagt gaaaaaaaca acaaaagttg aaactaaacc gactcaatcg gcgaagtagg
    10321 aggagaagct atgaaagcga ataaagcctt gtttgtcata ttggggattg tgtttaccct
    10381 agtcggtggg attgtctatg ccttattttg gcgaagtgat acaccccaag aaccaacaga
    10441 gcaggaaatt ttagatattt ccattaaaga tttaacaccg gaacaagtca gatcaatggg
    10501 cattcaaggt gatacgccga ttgatactct gcgtactctt gtgacaaccg ttaaatccaa
    10561 tgagcgtcgt atggatgaat taatcgatga aaaccgacaa ctcaagcaga aagaagattt
    10621 agtgaatggt cgtatcagtg atgcagtgaa taatgaaact cgcaaactac aagagcagat
    10681 tgcagatttg aaaatgcagt tatttgatat ggcaacacat gttaataaca aatcgacagc
    10741 acaagaatca actcctcaag cagaagctca gcctagtatg acaacgaata aaggatttgg
    10801 tactgccgga gataaattac ctatcggtgg tgcttctatg cctaatgtgg atattggagg
    10861 aatgtactgg gtagagccaa gcgatcaaat tggattggat gcaggtggaa aagctgtatc
    10921 aggtaataca cttgcaacta agtttggatt cccgaatgat tttaaaggtg gacaaactac
    10981 tggaaatacc gaaaagaaag gtctgccgtt tttcccggaa actgatgtag tgacaggctc
    11041 gcaaggaaca acaggaaatt ctcgtggtaa aaaccagatt acgccggttt acaccgtacc
    11101 aagtaattcc acattccttg attcagttgc aatgacaggg cttattgggc gtatcccgat
    11161 tgataataaa gtctctgatg cttatccatt taaagtactg attggtcgtg agaatctcat
    11221 tgccaatggt attgaattac ttgatgtaga aggtgcgatt gtttcgggta cagctactgg
    11281 cgactggact ctatcttgtg tacgaggcga tgtaaaaagt atgacctttg tgttcaatga
    11341 tgggcgtatt gtcagcacga ctaacaaagg gaatagtgag aatatcggtt ggttatctga
    11401 tagttcaggc attccttgtg ttcccgggga gagaaaaaca aatgcaccag aatatttagg
    11461 cacaaatttc ttcttagcgg ctgccagtgc cgcagcccaa gggttttcac aatcacaaac
    11521 aacgacagta gttgatggca atagtgttgt tggagctgtt accggtgatc aaggtaagtt
    11581 catcttaggg caagccatcg gcggtggttt aaaagaatcc gccgactggt ttagaaagcg
    11641 ttttgctgaa aactttgatg ctgtctatgt accacctgga catcgtgtcg ctattcatat
    11701 cgagaaagag attgagatcg attacaactc caaaggacgt aaagtgaaat acggaaacac
    11761 atcaactaat acacaacttg attaaaagga acaaacaatg aaagctttat attgcataat
    11821 gatgagtgcc ttattgataa caggttgcac aacttcaact gaagaattat tacccgctaa
    11881 cggcagtacg atgcgagata tttgggataa aggagcaggt aataacgatc tacacttata
    11941 ccgttcacaa caaggacgaa cactcgatcc tgtcgattat attcctaaca ctgagcaacg
    12001 agcctatacc cgtacggcag aaaatgaaat taataacttg ttccctcgtt tacctaatcc
    12061 ggatctgatt atgtatgtgt atccacacca aactcgttcc ggagagcctc ttagtattcc
    12121 aggatattct acggtattac ctttctacgg gcgagtccaa tatgctcaac cgggtgatcg
    12181 aacaagaggg ctttgatgat gtctttttta agtgaggtat tttcctcttt caaaccgact
    12241 aagacagagg ttatatcaag tgaaccaaat gaaaattcag gtgagtctga catcattcaa
    12301 aataaaatga gtgaggtaaa tggcgaggtt caaccattaa aacgcagtgg aaaactcacc
    12361 ctgtcacagc atcaccgtcg gttatactca caagccccct cttttattga tcatctacct
    12421 tggggagaat atttgaatca acacggtgtg atactcctcg atgatgctcg tagtgtcggg
    12481 gcggtatttg atatcaagcc gattggtaca gcaggacgta gtattgagtt tttaagcagg
    12541 atacgaaatc ttgtcaaaga tgccttacaa gatagctttg atgagctgga tataaatcct
    12601 tacgtcgtgc aattttattg ccaagatagc gatgatttac agccttatat tgatcagcta
    12661 cggaattata tctcgcctat tgcccaaaat agtgcattta gcgaagaatg gttacgagta
    12721 caagccaagc atttcaagga tattggtaaa ccagaagggc tttttattga tgacagagtg
    12781 acaaatacag cttggtctgg acgtattcgg agtaccaaaa tggtgattta tcgatatgta
    12841 gataagtcca atgattccaa tgaaaatctt attattgagc agcttaataa tgcttgttcc
    12901 cgaatcaatg gggctctaac aacggctgga ttacagttac agcggctaga tggtgaacaa
    12961 attcgccaat ggttattgcg ttggtttaat cctaatccat ctattaattt tgagggatta
    13021 agcaacaatg attgttacca tctttttggc aaacaaacct caaatgatga tcttccatta
    13081 gcttttactg atttcagtga ggatttattt tattcacagc cgagaaatga aggtagctat
    13141 tggtattttg acggacagcc acacgaggtt gttgtcgtca ataatttaag aaaacaacca
    13201 gaagtgggct taatgaccgg cgagattact cgtgggcgta atattaatgc gttatttgac
    13261 ctattgccag aatcaaccat catggcaatt accatcgtca tccatcctca ggataagttg
    13321 gaagcacatt tagaaaaaat cagtagtcga gcagtgggtg agaattttga gtcaaaatac
    13381 ctaaaagaag actgtcaaac tgtacaggct tatcttaaag agggtcataa actctatcaa
    13441 gcagctattg cattttacgt tcgaggtaag gacgaaaagg aattgcgtac tcgatctcgc
    13501 caactaagaa caattctgct cagtaacaat ttagagccgg taaaggaaaa cgcagaaatt
    13561 gctcctctta atagttacct acgttggcta ccaatgaatt ttaatccgca gatggatgcc
    13621 aaatcccatt actacacgaa gtactatttt gtacaacatt tggcaaactt attgcctatc
    13681 tttggtcgag atacaggcac tggtaatccg gggattactt actttaatcg aggaggagct
    13741 ccgtttaatt tcgatccgtt taaccgtaaa gacagaacca aaaacgctca caaactctta
    13801 ttaggaccaa caggctcagg aaaatcagca acactatgtg ggcaattatg tcaggctatg
    13861 gccgtttatc gtcctcggac gtttgttgtg gaggcaggaa attcatttgg tttattagcg
    13921 gactatgcag aacgttttgg actgaccgta aatcgcatta cgttagcccc aaacagtggc
    13981 attgtcttac cgctcttttc agaagcccat cggttattgg atatggaatt aaatccggaa
    14041 gatgtgccgg aagacattga ggataacgat gacactgatg atgaaggcga tatgcaacga
    14101 gatttgttgg ccgaaatgga gctgacagca cgtttaatga tcactggtgg cgaaaagaaa
    14161 gaagatgaaa aaatgagccg tgctgacaga gcagccattc gacgtgccat tttaaatgcg
    14221 gctcgccaaa ctaaatccga aggcagacaa acgctaactg aagatgtgaa aaaggcattg
    14281 gaggctataa gccgtgatga aaatactcgt gaagaacggc gtactcgttt ggccgaaatg
    14341 gcagaatcat tggaaatgtt ctgtaccgga gtcaatggac aatttttcaa ccgggaaggc
    14401 gaaatttggc cggaagcaga tctgacattg gttgatctag ccatgtttgc ccgggaaggt
    14461 tatgaagcag aattggccat ttcctatatt tcactcatta accatatcaa cagtctcggt
    14521 gaaaaatacc agcatagcga caggatgatt ctgaatgtaa ccgatgaatc acacattatc
    14581 actgccaacc cattattagc gaaattcttg gtgaaaggct caaaaatgtg gcgtaaatta
    14641 gggatttggc tgtggcttgc gacacagaat atggatgact tccccaatga agcagcgaaa
    14701 ttgctctcaa tggtcgaatg gtgggaactg ttgaatgtgt ctgctagtga aattgatgaa
    14761 atcaatcgct tccggaaact gtccgaagct cagaaaacga tgttgttatc tgccaaaaaa
    14821 tcagatcgta aatataccga aggtgtggta ttggcaacaa atatggaagc gctattccgt
    14881 gttgtaccac cgagtttatt tttggcttta ggaatgaccg agaaacacga aaaagcagaa
    14941 cgtcggcaat taatgatgca acatggttat tctgaattag atgctgcttt agaagtcgct
    15001 gctcgtattg ataaagcgag gggaattgca taatgatgaa acaacactat cgactattta
    15061 atgtcggacc acaaaaatcc tcattaggga ttgtatcttc ggcggtagaa actcaactgc
    15121 ttggattttg tgaacaaatt cgccaactca tcggtatcgg gaagcagatt accttattcc
    15181 ctcatcgggt agtgcaaaac cactgggcta tcgaacttag cggcgagaaa ggctctgttc
    15241 acttattact aaatgtgacg gggcgttctt tactgcctac ttccaattac cgtgaatggc
    15301 ctgctcgttt agtcatcgaa atagccgatc atgtggatgc ttactggttt gcaacattcc
    15361 ttgctcagca attggatttg aaaagtaatc ttttcttctt atccacatca attgtggata
    15421 actctatgca taacgaggta acggatacta atgaagcctg atacgacaat gcctaaaatg
    15481 aaaaaggtga gagctgtatt aaaaacaacc ttgattatca tcggtattat cttactacta
    15541 cttattgttg gttggctggc aatgacctat ttccctacca caaattttca agcgtggttc
    15601 tatgaaaccc gttatgcatg gttgggatgg cgatttgtat tatatggggt tatttggttc
    15661 ttaatggtaa aactcaatcg aagaggacaa atgccattga aagccagact gatgatttta
    15721 tctgctatcc cccttataga gggaattaat ttactgtatc tactttaagg aggatgagat
    15781 gacctttacc gtagatagct acttagaata ctttttgacc ttactagctt ggatcattaa
    15841 caataatatt tttgctgtac tggttcaaac cggtctattc atactaccgc tgatttttgt
    15901 tttaatcggc acatggatgg aagttaaaaa gcaaggggag gacgaaggta ataaaggaga
    15961 tttacttatt acttggctca gccttaaatt ttatccggcg atgtttgttg tagtgttagt
    16021 tttggccccg atgataccta tcaaccttaa caatattgag ctgaatgttg aacgttccaa
    16081 agcctgtggc taccgtattc caacctcacc agaggatagt ggttataatc aaatgaactc
    16141 tgaattgggc aaccagcaag cgagagtacc gctttggtgg ggattattcc atcaaatcaa
    16201 caaaggagtt acacacgcat taacagcttc aattccgtgt aaaccggatt tacgtcaagt
    16261 tcgctttgag gtccaacatg aaaaaatcaa taatcctgca ttattgactg aggttcgctt
    16321 atttgtacaa caatgttatg tacctgcacg tcagaaaatt caaagcagtc agctctcatt
    16381 gactccggca caggtgcgtg aaaccagctg gttaggtggt cgtattcttt tgacaaacag
    16441 tgagctttat ccccgttatc gagctcaaca acctcatagt ctatttccct acaatgcttc
    16501 ccgggataat ggattgccga ataatgggga aggtggtttt ccaaattgtg cagagtggtg
    16561 ggatacggcg aatactggtt taaaagatcg tttattagct gatgtcaaac agaacttctc
    16621 tgcaaaagtg attgattttt ttagcagcaa agaaaatgcg gatgaatcca tactccgtac
    16681 tgtattacga gcagagaata tggatatttc gagagggaaa gtttatcccg ggtatggggg
    16741 gaatttagat cctacatttg caaatgcaac gactcgatta acatcttcag tgggaagctt
    16801 agctgccagc tttgcagcct ttccagcatt cgatgcaatg cgacaagcac tgccgatggt
    16861 acatgctttt atgttgatgg ctgtgatcat cattactccg ctggttattg tgatgagtgg
    16921 ttattctctc aaaacattag ttacattaac ttttgtgagt tttgctttgg tatcactgac
    16981 attctggtgg gaattagcaa gatggttaga ttcttggcta ctatccgctc tatatgattc
    17041 cagtgcacat agtcgaataa atccgtattt ccttgaaaat acgcaagatg attttatcgt
    17101 caattttgtg atgggttcga tgttcttggt tttaccggcg atttggctag gcagtatgtc
    17161 gtgggctgga gtaaaaatag gagatatagc tgccggtttt actactgatt cattagatag
    17221 taaatccgca ggctctcaag gtggtaattt agttaagaaa ggcggtaagg aaatatctgc
    17281 agggtttaac aaataaaaca ataaggtaga ggttaatctc taccttatta atttctaatc
    17341 atattttctc atctttttac aaaatagcca ccctgataga gtccatatcc aaaatatcca
    17401 tcacgatatc catcaagctg attttcgtct tgatcagcaa ttacatccca taaatcttcc
    17461 ggcttactat cctcactatc atcttcaatt tcattaaccg tgttttcgac gtggtttgga
    17521 ttatatgcta cgtcatttgt tgaaatatct tctactggtg ttccattgag aattcgcaga
    17581 accgtgaatc caactaaaaa caagggaagt cctgcaaaaa tcaccgcaaa aacgacagct
    17641 tgttgtagcg gttttggtaa aaatgcggta cgttgtttga taaatttaac cggcttagcg
    17701 agctgctttc cgaaatcgat aaatttcata gtatctttcc taagataaaa ggttattgtt
    17761 tttggcgact actataaatt actttatctt tattgtcttt tacagaataa gataaaactt
    17821 ttcctgttaa attatctaat ccttctgctt tttcaaattg tacatcaaca tacaatataa
    17881 cagagcgatt tatgtttccc aaagaatttt tacgcttctg taaaaactct ttagctttat
    17941 ccttgcccat aggtataccg tcaataaact cgggattaga aacatacaga ttaatttttc
    18001 ttggcaaatt ttcagtatat tgattagaag aaatatacat atgcccattc atcaggggtt
    18061 ggtactcaaa cttaccttgt tcaaaatcat aattcccgaa ttctgagttt acaggaattg
    18121 tgaaaacaat aggggcttct tcagattttc tgtcatccac cagtttttgt agtttcttac
    18181 cagcttgctc aattttatcc tgaaactcaa actcgtcatt ttgatattta tgatacgtat
    18241 ttctatcgct gtaaagtaac cagtctttag ataacgaact aagctcgata ttctcactaa
    18301 aatgtaatga ttccatcaat atgttttgat agttgaagtt tttagacact gagaatgctg
    18361 aagtggatag cagtaatccg aagattaagc cccataatgg gaaagctttt ttacacattt
    18421 ttatctcctg acacattaga gagtttaaat tatgatagat ccacctgata ataaagagca
    18481 agtcttttaa acaaaaatcc cttagatttt ttaaacctaa gggatttacc taccgagcat
    18541 tgtgtttttt aacgtgggtc agctctgaca ccacaattgt tcatctgccg agctttgtct
    18601 tttttaactt gggctagctc tagcaccaca aaggtattat aaagtattca tcaaatgaac
    18661 atcaaactta taatggattt ttttacgagg gtcacaatcc acagaaccaa tacttggttg
    18721 atcattacta cggcgaattg ttgctcccgg ctcaataaac tcttttgcat ttccatttgg
    18781 ttgaacaaat ccgactagat atttcaagcc atcattttcc aactctaagg cataagtagt
    18841 aaaacctgag cctctggcga taatcgaacc gtcgttggtc actgcctttt taatcgggtt
    18901 tttgaaagta gttttgtcat acgaatactc gtaatcattt cctacccgtt taactgtgag
    18961 aggtttacct tctgtgctgg taaaagtcgg agatatggga aatagtgtgg tgcaatataa
    19021 aattaatact aaaataaatt cttaataaaa aatagctaca gttttattga aaattgtagc
    19081 tatttagaat ttaacagcca ttaccagtac cattatggga tcctgttaaa ttttctttaa
    19141 tacagtcgtt ttcttgtaat tttttgattt ctttaagttc attaagtata ttacgtcttt
    19201 gtgttattgc gttattctca tgcataaaat cagctaacag aacaatacca attaaggata
    19261 taactgctcc gaatacagca tataaccata gccttagctg ataagttatt aggagaaata
    19321 atataatata tgtatatttg agaaaagtgg gatgattcca ttctttaaaa gctcgaattt
    19381 tcctgcctaa ccaataacca aaattatttt tcataatcac tctccattaa gataatctca
    19441 ccctatctag tggaaaaaat aatttcctag cctcattttc aaagtcaata aatccaaatt
    19501 tacgataaaa attgaccgca ctttcatctt ttgcctcaac aattaatgcg taagctgcta
    19561 tatctgcacg aagtaccctt ttaagtgcat tacctaatag agcttgccct aaccctaatc
    19621 cctttacacg cttatctact gctaatcgac caagtaggac ggcaggtacc gtaggatatc
    19681 ttggtaattt cctctgtaat gtaattggta aatcagataa tgaaagactt gttgaagcca
    19741 gtgtgtaata tcctactact gtctgttcag aattaacagc taaaaaacaa gaagtaatac
    19801 gtcttttaat atcttgtgaa acctgagttt tgagatattg atttaataat tcagattcac
    19861 tatcaaaaca atctcgttta aattccttgc taaatgactc tattttcaat cccgaaagca
    19921 ttattccccc agaatctgtg agcttaatgc caaggctttt tgcattgcca aattaggttc
    19981 aggaggatca atcaatgctt tagcaaaaag ttcttggtca ttcacagata atcgaataat
    20041 atcattttgc tcaactgttt ttcttgctgc agatagtgca gctccaacaa caaaatcact
    20101 aagactacgc ccttcaagag aagcggctcg ttttaacagc atatgaactt cttggctcat
    20161 tctagcttca aatcgtgcgg ttgcagttgc catatatttt ctccttgaat tatttagttt
    20221 taattgtacg tatttatacc gtacaaatca agcatgacaa taaaaaaatc ccttagattt
    20281 tcaaacctaa gggatttacc taccgatctt tgtgtttttt aacgtgggct ggccctagtg
    20341 ccatacaggc attataaagt attcatcaaa tgaacatcaa acttataatg gcttttttta
    20401 cgagtatcac aatcaacaga gccgatactt ggttgttctt tactttggct aatcgttgct
    20461 cccggctcaa taaattcttt tgcattgcca tttggctgaa caaagccgac caaatacttc
    20521 aatccatcat tttccagctc taatgcatac gttgtaaaac ctgaacctct ggcgataatt
    20581 gagccgtcat tagtgactgc ctttttaatc ggatttttga aggttgtttt gtcatacgaa
    20641 tattcgtaat catttcctac ccgtttaaca gtaagcggtt ttccctccgt gctggtacag
    20701 gaaaatatta cgtttttatc tgctgcaaat actggggtcg tgcagagtgt aagagcagta
    20761 attactaata atttacgcat aaatgtaact ccttataagg ttaattttta ccaagaatat
    20821 aatcagcttc ctgattccgg cggcgtgcat tgataccgtt attatcaacc tggcgatttc
    20881 tgacagcagt tgccaaagca gtcatatcac cagtttgagc tgatcgtcta gctgcgtcaa
    20941 gcacactttt tgttttcgct agtgagccgt aattatatgc ataagacacc aaaacagcct
    21001 gagcgttcgc cggtaatgca ttccaatgtg aatcacctaa ctcttgtctc acattgttcg
    21061 caaagatagc agttctgcga gctaaatcac gttcagcatc ttctttggta atcacagtat
    21121 ccttggtcac tttaactacg gtaccgtctg cccgtgtaat cgtatcggaa ccatatccta
    21181 cacgatgggc attcacatcc cattgagcct tggagataaa gccttcaaaa ttacgcagta
    21241 accctgttgc ctgatccatc gttgaaccgc tgatttgtgc aagtgatggg aaatttccgc
    21301 ctacacctga accacctcta tttggtagag tcgggatgag agctgctaca ttcggaatat
    21361 ttgggatact caatgcaata tttctacgag agaggttaat attagagcct gtctctaaat
    21421 cagttaatgc aacattaccg ttttcaagtc cttgaacacg cttatccaga ctatcttggg
    21481 ataaactatg agcaccagca agagcttccc gttcggattt actttgcaga atcaccgaag
    21541 ccgtattgcc ggtgatcatt ttttgcatat ccatttccag ttttacttgg gaaatttcac
    21601 ggtcaataat attgagtact ctttccagtt ctacttgagc atccgcattt tgagcaacat
    21661 tcggctctcg cataccagct aggattgctc ggcgagccag tagcattttt tccattactt
    21721 tactggtcgc aatttcagcg gataaacgtt ggctgagaag ttcaacatct ggatcatcac
    21781 ggaggctttc aatcaagcca cgagtgacag gtacactact tgagcttaat tcagctaata
    21841 gctcggattt cggcacatcc atattcagta cattttctaa tttaacaatt gtacgaatat
    21901 gttcttcttc aatttccgga cttaaaccaa caccggcttt cgaactggtt ttagtaccac
    21961 aatcctcctt acaggttgaa attgattgct caccaataat cttagttaag aagtcggcag
    22021 cagcttgagg tgtatcccaa gtctgacaaa gattaccttc acaatttgaa accgggctgc
    22081 tatctaagac attccgctta ttgagtaaat taaatccgcc tttcgctaca tcaccaacga
    22141 cattaattgg atcttggttt tgcccacctt tacgttgccc accaacccaa actctcccat
    22201 ctttcccttt tttatcttct aggtcttttt gggcttgctt cgcatcaggt tgtgtcgagg
    22261 taatttgctt atagctctct aaatctgctg cttgccccca ttttcctcct agtgtgtgat
    22321 ctgccagaac tttagacatt tcctcacagg aagtttttag acggttgaaa tccagcttac
    22381 cttggtacat accatttgtc agcaaatcgt agagttgagg gttggcccgt tgcaatatca
    22441 ttgcaggcat actggcaacc gcacctttag ctgaatcaat gacattcccc attaaatctt
    22501 taaagccatc tttaaggccg tttaaatcat ttttaatagt tgttttaatg tcaaaattgc
    22561 cacaggttaa attcgctttc caaccgatgc ctaaatcaac gactttggta ttaccacgac
    22621 taggtggagc catataacct gttcctccgc cgatttggta aaagacacga tctgaaataa
    22681 tcgaatccga cttactaaat tccagtttat cagtgattga gtcagcaaaa gagatagagg
    22741 aagtactgga aaaaagtact gttattacta atagatgtgt tttcttgaat ttaaattgtg
    22801 atttcattgc aagacctcgt tttagtgtga ccaatcaata ctgtaaagga atgtttgccc
    22861 tcggcgttta caacaactat aaggtcgcca tagtgcccaa gcataatcac cttgatttga
    22921 aatctgagag gaataggtgt ctgtttgccc cccatttgga aaaacagagc aggtatttga
    22981 catttgagga taaagcattt gccatttatg tgttctggct tgtccttctt cgacaggtcc
    23041 tggtggccat tctccaacac cacctttttt cgctgccggg aaataaatat gtggttgagc
    23101 agttcgggtc acgatgtctg caactctctg cacaatggtt gcagaggctt tataatcgtg
    23161 agcttgtgtt acccaaccgg aacgtgggta aatatttccc cagctatcgc ctacacggcc
    23221 aacttcccgc attcccggaa tcagagcttc cggataaaac atttccggca tattttcacg
    23281 ccaagcaaag aaatctaatc cacttagaaa atagggtata aatggtgtgg tttgactttt
    23341 acaatagtag cctgtacttc ctaataactg accaattgct ccttggggat gcccgaaagc
    23401 atctgcattt ttgaaggtta gttgagagta ttgacgttgc ggagaacgat attctccgcc
    23461 ttttacgcca ggattgagag attgtaattc tgtccacgga gtttgcccat cctggttata
    23521 agatgaaacg accatttccg gtaaataatg cttaattttg gttgatgtac gaaccttgca
    23581 tccaaagtag gtgcaaaata accagaagca cgttccgacg actttatagt ctaaacagct
    23641 tgttgaggca cttgatgcag caatcgacgc cgtattcaat gatgctttta cctgttgagg
    23701 atataaggtt gttggtactg ctaaacttac agagagaagt accgaaaaaa acgctctttt
    23761 cattttgatt caccgtgttg ttgaacccat ttatgccatt catctagtgc tttttgtata
    23821 tcagtcatac cataaatcac gctcggagag gattgcagat tattaaaaaa caccgcaggc
    23881 acttttttaa ttccattttg ccatccactg atcacccctt gataagcatc ttttaattgc
    23941 tcttcttggg ctttccaatc tgctgaatta aagaatgctc gtatttctcg ttcggcaatc
    24001 tcgggggatt tactgagatt tcgactgatt tcctcttcaa aattctctac ttgatcaaga
    24061 taataaactt gggaggcaag ttgtgaattt tgaatggggt acatctttgt tgtatagaca
    24121 atgatattcg gctgtgcttg tgccactaca gaaaacacta ctgttactat gctgaaatat
    24181 cctagaaatc tacttgcttt catcactctc tttccgaata aataagcaga aaattagcga
    24241 gatttttaca tagaggatag gaaaaactct tttcaaaaaa gagatatttt tttgagcaaa
    24301 aaatggttga ttttataaat ggatttcgta tgatatggaa tattaagatg ctgtggaaac
    24361 agcccttaaa agtcgcataa ctcttgagaa gcggcggcta tccatcgagg tagttgagtt
    24421 atttacccaa aatgtctccc agcattctga aagggaacgc tgcaaatttg caggaatgcc
    24481 acctaaacac ctaccttccg agggatattt caattccctt ggaattgcga tctcctgagg
    24541 aattttattt atttaacttt ttataggaga actcgctatg agtcaacaaa ccgcaggatg
    24601 ggatgtgatc ccatttgaat cgtcaaaaac cgcaaaacct tctctttttt ggaaacttgg
    24661 caataagctc ggtaatattt tcgtttcggc gaaacataaa gctaaaagca aatatgtcga
    24721 ggtaaccaaa ggcatcaatc aacgaattgc tgaagaagat gaaatgcgag ccttagaatt
    24781 gcaaatgtgc ttagatgagc aagcagctga atatgagcag gaaatttctc gcattaagcg
    24841 taagatgttt ttcagggctt tattcgttgc gattattgcc tttttatgtg gtatggctac
    24901 cgtttttggt actcagctct ctttaatcta atttaactca cccatcgggg aaatgctatt
    24961 tcccttgtgg taatacattt ccccttaatt ttggagaaat gtatgtcagt tcatatcaaa
    25021 ctctcctgtg ttggagatat tttgccaatc aaactcaatg aatggacacc ggaacatcga
    25081 gccttacatc acgaaattag ccataaagct ctcgaagcct ggcaaaatcg agataaaggc
    25141 actcaaagcg tgcgatttat gcaacaaatg ccagcccgac aaggactgca tttccgcttt
    25201 ctgagtgtat cggagcaaga cggcaagctc attgtcagtc gttcatagtt ggttcaatgt
    25261 ttggtaagct tttttacaaa atgaatccca aagtactagc taaaatcgga gaagatttta
    25321 gaaaagctgg ttatcttatg ggagctggtt ttgtcggaat ggtaatttcc aatgatcaga
    25381 tttccacatc ggaaggattt gttctttttt tgtggggatt gtatatttgg attatcgggc
    25441 atatcgcact acatcattct gagaaaatac ttaattcaaa gcaaggagaa ccgaaatgag
    25501 tccgtacttt ttaggtgctg ctattggaac agcgttattg gcaacaattt ttattgttct
    25561 agtaacttgg gcaaatcgag atattttgtt tacaaaatca gataagccac agtctaaata
    25621 gcaaaactcc attctaaccc ataggggaac aagttccccg aggagcttgt tctccgtttt
    25681 accttccttt taccctatcg ggaaatactt tcccgaattg ggcttaagtg tttcccatta
    25741 ttttttattt tggagaaaca ttatgtcaga ttcagtatta aacacttatt ttaaacacgc
    25801 tcttgtcaaa gctggttttc cggatacctt agatatggag tattcactca gccattgtca
    25861 aggagatgga gtcgcatttt atggtcggct tggtacagat gatctaatcc agcttttcaa
    25921 tcatctcaat ccacagaaac gtaaacagaa aatgtttgct aatttgctaa cgcacattga
    25981 atcttgggaa acccacgatg atattggttt tgaaattata cgaaatcgct ttgggtatcg
    26041 ttactcgcat tggaatacga tggagcttta tgctaaaact gcagatcagt tagtgttttt
    26101 caatgatagt gatgctcgaa gaaactggta ttttcctact tcaaaagtgg ataaatacaa
    26161 agcattgtgg gacggattta tcgaagattt ggagcagtac atcaaagata tttcccgtga
    26221 aatggaatcg gtcggttatc aaattattga agcctcgccg tatcaaacgg aaaccgtttt
    26281 caaatttaat acggaaaaat atctagtaga actgcaacgt aaaccttctg agttttattc
    26341 agagcttgtt gattgggcat ttggtgatat gtgtgatttt gaagcagcta tagagcagat
    26401 ttgtcaaggg caactctgtt atgctgattt tgaagcaact gttaccgata agaaaagtga
    26461 aattcagtta ggtcttgctc gcttgagtgg aataagttac tcgccgaatg accgttcgtt
    26521 tagtggttat cgacaagagc ttattggtga ggcgattgcc tctgctcgcc ataatgcagc
    26581 acgttttgcc tacttgcacg cctaatttgc agatttttac tttaatttga ccgcttgtag
    26641 tggttaattt tcaccccgtg gggaaatatt ttccctattg ggcaaaatgt ttctccactt
    26701 tttaatttgg agaaatgtta tgaaaaatga acacaattta gagcaactta aatatatttg
    26761 ggataaccgc aaccttgaaa ataaagtcta tcaatatctg tttcacatct gcattgagcc
    26821 gatgaaaaaa ggagattgga atcgttatac gatttggctt aattttcacg gtaacttaat
    26881 caacgtgtca gacgttgtat atcgagttgt ggaatctcaa aagctcaaag atgacatcaa
    26941 aatttggtat gacaagcaat actattgccg tccaaccaaa gttgaaacaa caggttttat
    27001 ttccattttt ctgcacctgt tttatgaggg catagctcgt attttgctgg aacagggaat
    27061 gattactgaa actgaagcag ccgagaaaag ttacaacttc agagctgcaa attgttttca
    27121 acgtttgctt taatggaggt gagataatgg aacctcgcac tgttaaagtt atttacgatg
    27181 atggcgatta tttctttacc ctaatcaatg ccgatgaaca gactattcgt aattactacg
    27241 ctataggcag ttcaatcggt tttgataaca caaggaaaat tgtcgctgtt gaaattttat
    27301 aaactaccca tcggggaaac gacttcccca tagggcgata gtgtttcccc atttttctac
    27361 ccgaactttg gagaaacact tatgaaccct caatcaaaca cacagcctaa atttgattta
    27421 tatcaagaag tgaccgataa aatcatcgcc gctttagagc aaggaacggc tccttggctt
    27481 aaaccttggg atagcgttat tccttatggt ggtatgccgt gtaatgccat atccggaaga
    27541 ttgtattccg gaatcaatgt tttgttactt tggttgtctg ccgcagaaca cggctatatc
    27601 caacgcaagt ggatcactgc aaaagcagct attgaagccg gtggacacgt tcggaaaggt
    27661 gaaaaagcaa cccttgcggt cagctatcgc ccgtatgatc gagaaaaaac cgatgatgat
    27721 ggcaaccttg tcctcgatga cgatggtaac ccggtaatcg aacatctcgc ttcgattaaa
    27781 aagcactgcc tattcaatat tgaacagtgc gaaaaactgc cacaggactg gtatgaaacg
    27841 gttgaaaccc cagaacagct gactgacgaa aatcagtatg ctatttttga ggagattcgt
    27901 ttgatgttga aaggtatgga tttgcaagtg atggtaaaac caagcaatca agcttactac
    27961 cacccacgca atgaccatat cgtgatgccg gaaatgaagc agtttcattc accacaaaaa
    28021 ttccatagcg tgctgctaca tgaaatgact cacgcaacag ggcatcaatc tcgccttgct
    28081 cgtgatggta ttgtttccgg aaaagctcgc tttggcaata aagtttatgc ttttgaagaa
    28141 ttggtcgctg aaatgggctg tgcattcttg tgttctcacc taggctttgc tgacgtgcca
    28201 caaaatgcca gctacattga aagttggatc aaggtgttaa gagaggataa acgggcaatt
    28261 ttcagggctt cagggaaagc tcgggaagcc tgtcaatata tgctggatgc cttaaacatc
    28321 gcacagctgg ctgataaata cgaagtattt gaagaagccg cttaataaat ttgccgaaag
    28381 gcatttcccg tggggagata ctctcccttc ggggcattgt gtctcccttt ttattcactt
    28441 aacgagagga ctcaatgctc aatctaaact tatttaaacg acccattgaa atttcgacac
    28501 ttgaatcttg gtcaaaattc tgtgatgatg ttggtaaagt agcttttgtt gcagtacctg
    28561 ctatgctgta tagtaattac gagttttgga ttaagataag cagtataatt ggtctattta
    28621 tagctaccta tttctgttta gttatcggta gaaatatacg ccaatttatt gagaaggaga
    28681 aatcaaaatg ggattaatga tcggcatttg gattattgct tttattgcat ttgggttggc
    28741 catatggaca agccatattc taaaaaagca agatgaacgc cttaaacagc taaaaaatag
    28801 ctaactttca aaatacggca cattttgtgc cgtatttctt ttgtactggt ggcaaatata
    28861 agattactat catcagtata ttgtaatatc tcaactcaac agcattagtc aaaaatcctc
    28921 caacatattc agagagtttt tcctactgag ttctcttatt ttttggttca atactctccc
    28981 tttataaatt aaatttggtt cagataaaag ccgctcaatg gcaaaaggat aaaggagccc
    29041 ttacgggcaa gggtaatccc ctaaggggga ataag
//
LOCUS       DANLXD010000019        28608 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.019, whole genome shotgun sequence.
ACCESSION   DANLXD010000019 DANLXD010000000
VERSION     DANLXD010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 28608)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28608)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28608
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.019"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            14..988
                     /gene="znuA"
                     /locus_tag="PXD18_000682"
     CDS             14..988
                     /gene="znuA"
                     /locus_tag="PXD18_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein
                     ZnuA"
                     /protein_id="HDL6301143.1"
                     /translation="MFKRTLIGLAVLGASVAQADVLTSIKPLGFIASAITEGVTETKV
                     LLPVTASPHDYSLKPSDVTQLQSAQLVVWVGDGLEGFLEKSIEKLPREKVLTLEDVDA
                     IDDIVDKASKKEDKDDDHDHKHEHKHEHKHEHKHEGHNHEGHNHDHHGHSHDEDWHIW
                     LSSEASELAAEQIAARLSEQMPEHKAKIAENLAKFKANLTAKKAEIAKQLEPVKAKGY
                     YTFHDAYGYFEREYGLNSLGSFTINPTVAPGAKTLTAIKKNIAKNKAQCLFAEPQFTP
                     KVIETLAKETKVNVGQLDPLGAKVQLSATAYPEFLQVLADEFSQCLTK"
     gene            complement(1040..1360)
                     /locus_tag="PXD18_000683"
     CDS             complement(1040..1360)
                     /locus_tag="PXD18_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005621693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnA domain-containing protein"
                     /protein_id="HDL6301144.1"
                     /translation="MIYPTCPECKSENTYHDSIQFVCPDCAYEWTGEETDQDDDVLIV
                     KDSNGNLLSDGDDVLLIKDLKLKGSSEVLKKGTKFKGIRLAQGDHNVDCGKIMLKSEF
                     LKKA"
     gene            1501..3864
                     /gene="rnr"
                     /locus_tag="PXD18_000684"
     CDS             1501..3864
                     /gene="rnr"
                     /locus_tag="PXD18_000684"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HDL6301145.1"
                     /translation="MIVDPNYQQELEKYENPVPSREFILNTIREHNAPMSRDELLSAF
                     HIDDEERMEGIRRRLRAMENDGELVFTKGKRYALPEKMDLIKGTVIGHRDGYGFLQVE
                     GHEKGATKSEDWFIPNAQMVKVMHGDFVLAQPNGTDRRGRKEVRIVRVLEARKKQIVG
                     RFFLESGIGFVVPDDSRVNQDILIPDEHRMGARMGQVVVVELQERKASFSRPVGIITE
                     ILGDNLAPGMEIEIALRNHDIPHIWPEGVEKQIRQFSSEEVPEEAKQGRVDLRDLPLI
                     TIDGEDARDFDDAVFAKKEGNGWRLWVAIADVSYYVRPKTALDLEALNRGNSVYFPNR
                     VVPMLPEVLSNGLCSLNPQVDRLCLVAEMSVSSKGELQDYQFYEAVMNSHARLTYTKV
                     WKMLEGDEALRERYAPLVPHIEELYAMFQTLMKARHKRGAIEFETIENQFIFNPQGRI
                     ERIEPLIRNDAHKLIEECMILANIAAARFVEKANEPALYRIHDKPSEEKLLSFKSFVR
                     ECGLTWDVGLDPTPKDYGVLLEQIAERADKELIQTMLLRSLKQAVYAADNIGHFGLAL
                     TEYAHFTSPIRRYPDLLLHRAIKYLIEKGKGNTRYYTDGGGYHYKLDDMDEFGDKCSA
                     TERRADEATREVADWLKCEFMQDHLGEEFDGVISSVTGFGLFVKLNELLIDGLVHIST
                     LDNDYYHYDADRQRLIGGSGIIYRLGDAVRVKVINVNLDEKKIDFELLTGNKKTGKTA
                     KKKAKATEVPVFKEPKTVKKAKKVAEKKPAKSAKKRTKTTASKSRKK"
     gene            3868..4134
                     /locus_tag="PXD18_000685"
     CDS             3868..4134
                     /locus_tag="PXD18_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301146.1"
                     /translation="MDYKKQILFSLLFALVIAIISYFLFTYIPFDCSDLSKLNDSQRL
                     ECRTAEFLGVYYWLPHTTTLFFGSVLLYWAVYGMISLVQAVLKR"
     gene            4357..4815
                     /gene="mraZ"
                     /locus_tag="PXD18_000686"
     CDS             4357..4815
                     /gene="mraZ"
                     /locus_tag="PXD18_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HDL6301147.1"
                     /translation="MFRGASSISIDSKGRIAIPTRYRAELLEKHHGILVCTVDIRQPC
                     LLLYPLHEWEMVEQKLLALSNFDPVQRRIQRVMQGFATECEMDSAGRILLSPTLRQHA
                     QLEQQIMLVGQLNKFEIWQDKQWQAQIAEDLAFGSSAEILDCEALKNLSL"
     gene            4831..5769
                     /gene="rsmH"
                     /locus_tag="PXD18_000687"
     CDS             4831..5769
                     /gene="rsmH"
                     /locus_tag="PXD18_000687"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HDL6301148.1"
                     /translation="MSENPKHITVLLHEAVDGLAIKPNGIYIDGTFGRGGHSRLILSK
                     LGENGRLIATDRDPRAIAEAQTISDPRFQIEHTAFSAIPELCERMGLVGKIDGILLDL
                     GVSSPQLDEAERGFSFMRDGPLDMRMDTTKGLSAAEWLAQVSAEDLAWVLKEFGEERF
                     AKRIAQAVVSYNKSANEKISRTLQLAQIIADAVPFKDKHKHPATRSFQAIRIFINGEL
                     DELEKALNSALTVLAPEGRLSIISFHSLEDRMVKQFVRKHSKGMDVPRGLPILEAELT
                     KNIPLKTIGKAIMPSEAEIEANARSRSAVLRIAEKR"
     gene            5788..6099
                     /gene="ftsL"
                     /locus_tag="PXD18_000688"
     CDS             5788..6099
                     /gene="ftsL"
                     /locus_tag="PXD18_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HDL6301149.1"
                     /translation="MSNERYPLHQIIIDDIFSHNKVALLLLIGVVISAVATIWITHQT
                     RLSVSEQGQLIQANQKLESQYTNLQLEENSRSSRARVDAAAKSFGLQPIKKEQEIILV
                     E"
     gene            6103..8163
                     /locus_tag="PXD18_000689"
     CDS             6103..8163
                     /locus_tag="PXD18_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsI"
                     /protein_id="HDL6301150.1"
                     /translation="MVKSVKLKRKQEAPVAKAEPQQAEGKKTPSFLPTRFRVVVFFML
                     LMVGGLLAQTAYIQLFDSERLIKEANNRSLRTKELQFTRGRILDRNGRFLSISVPMYS
                     LTLDPREYFDTKLRRSNESWRALAIEMETSKGKIEANVNKFIEKKNFSKEKVDFDPRS
                     ILNTKSEGYWTQLAQVTGLDYNSLIEKVRNNPSSVFLRLDNENLVRERQKFQALSKEI
                     GRSYNDIMDELYSKNRQRFLYLSRHQSEAISEYAKELDIDALVIKVESRRFYPLAEES
                     SQLIGFTDKDDMHGSEGLERSFDSLLIGKNGKQIIRKDAKGNIVENIRSEKQYDPQDV
                     MLSIDEELQSMVYGEIKKAVQENNAESGTAVLVDVQTGEILAMANAPSFNPNKRDSFK
                     PELMRNRAITDTFEPGSTVKPFTVLTALQNGVTYRDEVIGTRPFVVNGHTIKDVAPRD
                     SLTLTGILQKSSNIGVSKLALRMPANALVDTYTKVGFGKDTGLGLGEQRGTNGDRKRW
                     ADIERATLSYGYGLNVTPLQLARAYATLGSFGLYRPLSITKVDPPVIGERVLPEKTTR
                     DVVHMMESVAAKGEGGHRAAVDGYRVAIKTGTARKLEKGKYVEKYIAYTAGLAPASDP
                     RFALVVLINEPKAGNYYGGFVSAPLFSRIMGYTLKQRNIKPDNLTENTQSAVREIKLE
                     RPIN"
     gene            8172..9662
                     /gene="murE"
                     /locus_tag="PXD18_000690"
     CDS             8172..9662
                     /gene="murE"
                     /locus_tag="PXD18_000690"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HDL6301151.1"
                     /translation="MKRLLPFLTELDAWVEELTELKQMTLDSRQVQAGDLFVALKGHQ
                     VDGRKFIPNAIEQGAAIILAEADEDQPEIELDPKFAKFNLDRTACCKVVSVPRLPKLL
                     SEIAGALYHNPSHKLTLAGITGTNGKTTTAQLLAQWHNLLGGKSAVMGTIGNGLYGQV
                     QEAVNTTGSAIEIQHNLANFVELGADFCAMEVSSHGLAQFRAEALDFDLAIFTNLSRD
                     HLDYHNTMEEYAQAKFRLFNELSTKAQVINADDEIGREWLTQLPNAVAVSTDPKFAGN
                     HQFVKATAVKFTLQGASIAFESSWGNGELHSRLIGAFNVNNLLTAFAGLLALGFDIQE
                     LVKTAPNLVGVAGRMECITAPNKPMVIVDYAHTPDALEKALQAARLHCEGELWCIFGC
                     GGDRDAGKRPLMATIAEKLTDKVIATDDNPRTEDNQKIMADIVKGFSKPQQIIHNREE
                     AIKTAIEQAKATDVILIAGKGHEDYQIIGTEKLHFSDQETARKYLF"
     gene            9750..11144
                     /gene="murF"
                     /locus_tag="PXD18_000691"
     CDS             9750..11144
                     /gene="murF"
                     /locus_tag="PXD18_000691"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HDL6301152.1"
                     /translation="MIKLTTQQIAEILNAKLIGNGETVVETTSTDTRQAVENGLFFAL
                     KGENFDAHHYLQNAVAQGCVAVVVERECEIDVPQLVVADTRLALGELAKWLKAKLNPK
                     TVAMTGSSGKTTVKEMTAKILQKMTACEQEVLYTFGNLNNDLGVPMTLLRLTEQHKYA
                     VIELGANHIGEIAYTTAIAQPDACLVNNVAAAHLEGFGSLAGVAQAKGEIYRGLKENG
                     KAIVNLAFYYPQWQKEIGSREMQSFSYIGSDSDSYADYWAEDVELHLSGSRFTLHTPQ
                     GEIAIDLPYLGKHNVSNALAATSLAMSVGATLEAVKAGLEQRSMVKGRLYPVQINDHC
                     LFIDDTYNANVDSMKSAISVLENYPAYRIFAVGDMAELGEESSKCHQEVADFAKNAAL
                     DLIVSFGKESAVISQQAEHHFTDKQQMVDFLLPIILQKIEQKQPLVLLAKGSRSQKME
                     TVISELCKPFNLNF"
     gene            11165..12247
                     /gene="mraY"
                     /locus_tag="PXD18_000692"
     CDS             11165..12247
                     /gene="mraY"
                     /locus_tag="PXD18_000692"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HDL6301153.1"
                     /translation="MLVWLAELLVQYNTAFNVVSYITFRAIMALLTAMGIGLWIGPKV
                     IRRLQILKFGQEVRNDGPESHFKKRGTPTMGGVMILAAIGVSTLLWADLRNSYVWFTL
                     FVLFGYGAVGFVDDYRKISRKNTDGLIARWKYFWLSAIALVAVFGMYAVGKDTAATQL
                     VVPFFKDVMPQLGLFYIVLSYFVIVGTSNAVNLTDGLDGLAIVPTIMVASAFALIAWA
                     TGNFNFAQYLHIPFIPNAGELVILCTAIVGAGLGFLWYNTYPAQVFMGDVGSLSLGGA
                     LGVIAVLVRQELLLVVMGGVFVVEALSVILQVGSYKLRQKRIFRMAPIHHHFELKGWS
                     EPRVIVRFWIITLMLVLVGLVTLKLR"
     gene            12311..13612
                     /gene="murD"
                     /locus_tag="PXD18_000693"
     CDS             12311..13612
                     /gene="murD"
                     /locus_tag="PXD18_000693"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDL6301154.1"
                     /translation="MQKQYENKTVTIIGLGTTGLSCVDFFKKKNANIQVIDTRANPAG
                     ADKLDVTIPLHTGGLNSEWLLKSDLIVISPGLAVATPEIQQAIQAGVEIVGDVELFCR
                     EAKAPIIAITGSNGKSTVTTLTTEMAKQAGIKVGMGGNIGVPVLSLLEGDYDLFVLEL
                     SSFQLETTYSLKAKAATVLNISEDHMDRYDSIADYRQAKLRIYDNAENIIVNGEDAQT
                     YPIQAVKKVIRFAEQNAEYSLRNQMLYSGDDAIIQTKQMLISGRHNEMNALAAMALAE
                     AANVPREGIVKALQIYGGLPHRFQAVATNDGVRWVNDSKATNVGSTVAALNGLNIAGT
                     LYLLLGGDGKAADFSELKPLINKPNIVCYCFGQDGAALAELSEQSVLVETMQQAIEAI
                     RPQLKKGDMVLLSPACASLDQFKNFEQRGEVFMALAQGQHA"
     gene            13612..14790
                     /gene="ftsW"
                     /locus_tag="PXD18_000694"
     CDS             13612..14790
                     /gene="ftsW"
                     /locus_tag="PXD18_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HDL6301155.1"
                     /translation="MLERIKSEWDKWVRLTPSNSLYDRTLIWLFLGLLIIGFVMVTSA
                     SLPVSTRLNNDPFYFAIRDGLYIIASIIFCYVFVQIPIEKWEKHNLALFFISIGFLIA
                     VLIFGRSINGAVRWIPLGILNFQPAELAKLAVICYFASFYVRKYDEIRKEKASFWRPA
                     VILFLFGFLLILQPDLGSTFVLFVLTFSMLFIVGAKIMQFMFLGVVGTVLFAVLILTS
                     EYRLKRVTSFMDPFADAYGDGFQLSNSQMAFGQGEFWGQGLGNSVQKLEYLPEAHTDF
                     VMAVIGEEFGFFGIACIVLLLILLTVRALKISKESLVLEERFKGYMAFGIAIWVFLQG
                     FVNLGVASGLLPTKGLTFPLVSYGGSSLVIMSIAIAVLLRIDHENRAERIGHAKIKTI
                     "
     gene            14909..15964
                     /gene="murG"
                     /locus_tag="PXD18_000695"
     CDS             14909..15964
                     /gene="murG"
                     /locus_tag="PXD18_000695"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDL6301156.1"
                     /translation="MAKKLLVMAGGTGGHVFPAIAVARELQKQGWQIRWLGTKDRMEA
                     TLVPKHGIEIDFIEISGLRGKGVAALLKAPFAIFKAVMQARKIIKNYQPDAVLGMGGY
                     VSGPGGIAAKLCGVPVILHEQNAVAGLTNVWLSKIARKVLQAFPTAFKEAEVVGNPVR
                     EDLSALPLPNERFAKRGYPINILVMGGSQGARVINQTVPEVAKVLGNNVFISHQVGKG
                     NLAGIEEVYQQTGNGIASEFIDDMKAAYEWADLVICRSGALTVCEIAAVGLPAVFVPF
                     QHKDRQQFLNANYLAADGAAVIIEQSDFTPKALQQALEPLIANRQLLLDMSMRARAKS
                     TPMAAKRVAEVIIQEAN"
     gene            16040..17467
                     /gene="murC"
                     /locus_tag="PXD18_000696"
     CDS             16040..17467
                     /gene="murC"
                     /locus_tag="PXD18_000696"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013527829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HDL6301157.1"
                     /translation="MKNFQDKVKKLVPEMRRVSQIHFIGIGGAGMSGIAEVLLNEGYQ
                     ISGSDIADRAVTQRLSAAGAKVFIGHQAENIAGASVVVVSTAIDETNPEIIAAREARI
                     PVIRRAEMLAEIMRFRHGIAIAGTHGKTTTTAMISMIYTEAKLDPTFVNGGLVKSTGK
                     NAHLGASRYLIAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEKMKETYVRFLR
                     NLPFYGLAVMCADDETVMEIAPRVGRQVITYGFSENADYRIEDYQQTGFQEHYTVVCP
                     SGERIDVLLNVPGMHNALNATAALAVAKEEGIGNEAILAALADFQGAGRRFDQLGSFI
                     RPNGKIMLVDDYGHHPTEVDVTIQAARSGWEGKRVVMIFQPHRYSRTRDLFDEFVQVL
                     SKVDALILLDVYAAGEAPIVGADSKALARSIRNLGKVDPILVSDTDQLGEVLDQIIQD
                     GDLILAQGAGSVSRISRGLAESWKN"
     gene            17557..18468
                     /locus_tag="PXD18_000697"
     CDS             17557..18468
                     /locus_tag="PXD18_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDL6301158.1"
                     /translation="MSIKNEKIAVLFGGVSQEREVSLNSGAAVTAALKSLGYNVEGID
                     TKEFPIEKLKEKGIQRVFNILHGGIGENGVLQGALEQMGIPYTGCGVMASAVTLDKFR
                     TKLLWNAVGLPTADMVVVQRGQAVDFDQIIAKLGLPVFVKSSCEGSSVGVFKVKTKEE
                     LAPAIHEALKFDSIVLVEEFLAGNEYSVPVLDGQVLPAVQVIPDGEFYDYHAKYVSDN
                     TQYVVPALNDERQAEVAKLVKAAYDVVGCRGWSRIDVMEDGEGKFRLVEVNTNPGMTS
                     HSIFPKSAATVGISFEKLVERVLELSA"
     gene            18468..19259
                     /locus_tag="PXD18_000698"
     CDS             18468..19259
                     /locus_tag="PXD18_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HDL6301159.1"
                     /translation="MGIFRKKNSTNVRLNVLNPKTPVSPRKWLVFIKPLIVLLCTLFV
                     FGVYSNWQNILESWDKTPIRAYALTHKTQFTTNADIRETLSKEPALKGYFGQNIQEVK
                     DKLLSIPWVKDVAVRKLYPDRLSITLLEHKPVAIWNDTNFVSEQGTVFSLPKDRIDKN
                     GLPLLYGPDTEGKSVLEAWNKIRADLNARNLDLTSVSVDNRGSWTIRLSNQVELRLGR
                     GEWTSKIDRFVTIFPEIHIPEGNRLAYVDLRYPHGAAVGFSPIKN"
     gene            19282..20553
                     /gene="ftsA"
                     /locus_tag="PXD18_000699"
     CDS             19282..20553
                     /gene="ftsA"
                     /locus_tag="PXD18_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HDL6301160.1"
                     /translation="MTKAVESKIIVGLDIGTSKVVAVVGEVLPDGVINVMGAGVCPSK
                     GVDRGGVIDLDAAVNSIQRAIEQAESIADCQIMGVTLAISGQHIVGLNEAGSSTLSGG
                     IVTQDNIESAVDMAKAIKLQDGLETLHMIPQEYHVDRLPATKNPIGLSGMRLQVQAHL
                     IACHQAWLKNLKNAVEHAKLKVDQVVFSGLASSYSVLTEDEKELGVCLIDIGGGTMDV
                     LVYTDGALRYSKVIPFAGNNITDYLARVFTTSRPEAESLKVGYGSAISPPTHNSDKKI
                     EVAGLGGRMARTFTRAQVATVTSQCYNDLLKVVEEELTQLRHELFQKGIKQELIAGVV
                     ITGGGSQIEDIVECAKSIFGSQVRVGYPLNITGLTDYVNKPQYATALGLLQYSHYNYT
                     EQGTSTDSNEDIFAPIGRGTKKIIDFFKSKF"
     gene            20586..21833
                     /gene="ftsZ"
                     /locus_tag="PXD18_000700"
     CDS             20586..21833
                     /gene="ftsZ"
                     /locus_tag="PXD18_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HDL6301161.1"
                     /translation="MFEPIIEQTQDAIIKVVGVGGGGGNAVDRMSRSADDIKGVEFFD
                     VNTDAQVLRKRTTRQTIQIGASTTKGLGAGADPMVGKQAAEEDREAIANALKGANMTF
                     IAVGMGGGTGTGAAPVVAQIAKEQGSLTVGVVTKPFRFEGPRRMRFADQGIKELSQYV
                     DSLIIIPNDKLRGLGKQTTAVDAFAAANDVLSNCVLGITNMITSSGGSTGADINVDFA
                     DVRTVMSGKGHAMIGTGFAEGEVGEGRAEKAMNDAISSPLLENVDISGASGMLINISA
                     GTDFLLEEVYAMMDLIYGFATEDAAIVFGCNYYPEMDGKVSVTLVATGIGQPEEALHM
                     PHKAQPVYAQQGNHVQATQPTQPNHAVQQPNFTQPSSYGQPNQFSGQPQPLQQPVAPK
                     PQSVDTAQIFNPNSIPGFMRNSQ"
     gene            21865..22785
                     /gene="lpxC"
                     /locus_tag="PXD18_000701"
     CDS             21865..22785
                     /gene="lpxC"
                     /locus_tag="PXD18_000701"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HDL6301162.1"
                     /translation="MTKQRTLKQAAKVTGIGLHSGKKVTLTLRPAPANTGVIYARTDL
                     EPVVYFPASADSIRDTQLCTCMVNDDGVRISTVEHLNAAMSALGLDNVIVEVDAPEIP
                     IMDGSSSPFIYLLLDAGIEEQDAPKKFIRIKETVRVEEGDKWAELKPYNKGFKLNFTI
                     DFEHPLIPKNVGSYSIDFSAENFIQQLSRARTFTFMKDVEYLQSIGLALGGSLDNAIV
                     LDDYRILNEDGLRFKDELVRHKMLDSIGDLYMCGYNILGEFSAYKSGHGVNNKLLRAV
                     LENKNAWEFVTFEDKAEVPQGYQVQQEIFI"
     gene            22958..24640
                     /gene="recN"
                     /locus_tag="PXD18_000702"
     CDS             22958..24640
                     /gene="recN"
                     /locus_tag="PXD18_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HDL6301163.1"
                     /translation="MLTQLTINNFAIVRHLILELNEGMSVITGETGAGKSIAIDALGL
                     CLGYRSESGMIRNGSDKADISATFTMQPHSPAYLWLQEHELLDEDNPQECILRRMINI
                     DGRSKAFVNNRSLPVSQLRELGQYLIHLNGQHAPQLLLKNEYQLEIVDHYATLQPLLM
                     KMAKQYGNWKELNKQVKNFQKQCQENEARKQLLEYQVEELDEFAIKANEFEEMEEKYN
                     ILSSSEELTELSDEITRLLSDDEINANSLIYKALRNAENLAEVDSQYQGILDMLNEAL
                     IQIQEASSEVAQLASKIEQDPELLQELDNRIAQTISLARKHHIQPNELWQYHATLKAE
                     LQELLDFEDNEEQLIQNEKQAYQECITLAEEIYQKRLDATHKLSEQVTKQIKHLAMEN
                     GEFFIHIEHNLEKMSANGADYVEFNLRSNLGQQPQPLAKIASGGELSRISLAVQVLTA
                     NKLSTPTIIFDEVDVGISGSAATTVGKLLRKLGEKCQVLCVTHLPQVASYGNQQFNVQ
                     KYVENNQTETQMTLLTEAERIHALARLLGGSEITETVLANAKEMLNLAKNNE"
     gene            complement(24687..24762)
                     /locus_tag="PXD18_000703"
     tRNA            complement(24687..24762)
                     /locus_tag="PXD18_000703"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(24727..24729),aa:Ala,seq:ggc)
     gene            complement(24842..26281)
                     /gene="gltX"
                     /locus_tag="PXD18_000704"
     CDS             complement(24842..26281)
                     /gene="gltX"
                     /locus_tag="PXD18_000704"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDL6301164.1"
                     /translation="MKIETLFPLDPNVKVRTRFAPSPTGYLHVGGARTALYSWLYAKH
                     NDGEFVLRIEDTDLERSTPEATAAILEGMEWLDLAWEHGPYFQTKRFDRYNQVIDQML
                     EAGTAYRCYCSKERLDEVRAEQEANKEKAKYDQHCLHNPQNDPSQPHVVRFKNPTEGS
                     VVFDDAVRGRIEIANSELDDLIIRRTDGSPTYNFCVVVDDWDMGITHVVRGEDHINNT
                     PRQINILKALGAPIPTYAHVSMINGDDGQKLSKRHGAVSVMQYRDDGYLPEALINYLV
                     RLGWGHGDQEIFSRDEMIELFDIHSVSKSASAFNTEKLQWLNQHYIRSLAPSYVAKHL
                     EWHMQTQGIDFTSGPKLEEIIPVLGERCKTLKELAESSRYFYQEFKAYDEKAAAKNFK
                     AEAVAPLAKLLEKLTACNDWTVENIHEAMNQTAAELEIGMGKVGMPFRLAVTGSGQSP
                     SMDITAKLVGKERTLARLQKAIEFIQANS"
     gene            26456..26531
                     /locus_tag="PXD18_000705"
     tRNA            26456..26531
                     /locus_tag="PXD18_000705"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:26489..26491,aa:Val,seq:tac)
     gene            26580..26655
                     /locus_tag="PXD18_000706"
     tRNA            26580..26655
                     /locus_tag="PXD18_000706"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:26613..26615,aa:Val,seq:tac)
     gene            26708..26783
                     /locus_tag="PXD18_000707"
     tRNA            26708..26783
                     /locus_tag="PXD18_000707"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:26741..26743,aa:Val,seq:tac)
     gene            26832..26907
                     /locus_tag="PXD18_000708"
     tRNA            26832..26907
                     /locus_tag="PXD18_000708"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:26865..26867,aa:Val,seq:tac)
     gene            complement(27061..28554)
                     /gene="mltF"
                     /locus_tag="PXD18_000709"
     CDS             complement(27061..28554)
                     /gene="mltF"
                     /locus_tag="PXD18_000709"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltF"
                     /protein_id="HDL6301165.1"
                     /translation="MKGLIARLFIAVALLLWAWDMIFPWQKIIHSEANHYTQIQQSKT
                     LKVGMINHPLSYFVGPEGKSGIEYDLATAFAQYLKVNLDIKTYDSSEKLFEALRNNDV
                     DIAAAGLLYHSELNDEFQIGPSYYSASWQLVYKKGSARPYRLSDLRENVIIPAGSAVI
                     PILNQLKVDNPELKWQISDKFTQEELLLKVAQGEISHTIAMSVDISAAQHINPNLAVG
                     FDLTDENPVLWYLANSSYSELQSVLLDFMSYSMETGLISRIEEKYFNHLAKFDYVDIQ
                     SYLNAIKTILPKYEPLFRAHKGELEWQMLAAIAYQESHWDPNATSPTGVRGIMMLTKD
                     TADRMKISDRTNPAQSIKAGSEYLHMLMRQMPETIPQADRIWYSLAAYNMGLGHLLDL
                     RRLTKQLGGDPDNWLDVKKNLPLLAEKRYYANLKYGYARGYEALQYVENIRRYYGSII
                     NYQRVEEQKMQEQENLPDGQIKQENSSYEKIEEKEIPTDKEITPASN"
BASE COUNT         8674 a         5507 c         6387 g         8040 t
ORIGIN      
        1 taaggggaat tttatgttta aaagaacatt aatcggtcta gccgtgttag gtgcaagtgt
       61 tgctcaagcg gatgtattaa ccagtattaa gcctttaggc tttattgcca gtgccattac
      121 cgaaggggta actgaaacta aagtattatt accggtaact gcctctccac acgattacag
      181 cttaaaacct tcagatgtga ctcaattaca atctgctcaa ttagtggttt gggtgggtga
      241 cggcttggaa ggctttttag aaaaaagtat tgaaaaactg ccgagagaaa aagtattaac
      301 ccttgaagat gttgatgcga ttgatgatat tgtcgataaa gcaagcaaaa aagaagataa
      361 agacgatgat cacgatcata aacatgaaca taagcacgaa cacaagcacg agcataaaca
      421 cgaagggcat aatcacgaag gacataacca cgatcatcac ggacatagcc acgatgaaga
      481 ttggcatatt tggctctcaa gcgaggcaag tgagctggca gcagagcaaa ttgcggcacg
      541 tttaagcgaa caaatgcctg aacacaaagc gaaaattgcg gaaaatcttg caaaatttaa
      601 agcaaatcta accgctaaaa aagccgaaat tgcgaaacaa ttagagccgg taaaagccaa
      661 aggttactac acattccacg atgcttacgg ctattttgaa agagaatatg gtttaaattc
      721 attgggttca tttaccatta acccaactgt tgccccgggt gcaaaaacac ttacagcaat
      781 caagaaaaac attgcgaaaa acaaagcaca atgtttattt gccgagccgc aatttacgcc
      841 gaaagtaatt gaaaccttag caaaagaaac taaagtaaat gttggccaat tagacccact
      901 cggtgcaaaa gttcagttaa gtgcgactgc ttaccctgaa tttttacaag ttttggctga
      961 cgaatttagc caatgtttaa caaaataagt taaaaatccc ccatttaaat ataaatgggg
     1021 gattttgcga ttacatcact taagcttttt ttaagaattc tgatttcaac ataattttac
     1081 cgcaatcgac attatggtca ccttgagcta aacggattcc tttgaatttt gtaccttttt
     1141 tcagtacttc agacgagcct tttaatttta aatctttgat taataataca tcgtccccgt
     1201 cagataataa attgccatta ctgtctttta caattagcac atcatcatct tgatccgttt
     1261 cttcgcccgt ccattcatac gcacaatccg ggcaaacaaa ttgaattgag tcgtggtaag
     1321 tattttcgct tttacattca gggcaggttg ggtaaatcat tttaattcct caaattaata
     1381 aagaaccaga ttatataccg aaatccagca aaacgctaag cggtcatatt ttgccgattt
     1441 tttaccaatc gagctaaaag tcagttagaa tagccttaat tacacaaaaa ggaggatact
     1501 atgatagtcg atccgaatta tcagcaagaa ttagaaaaat acgaaaatcc ggtaccaagc
     1561 cgagagttta ttttaaatac aattcgtgaa cataacgccc caatgagccg tgatgaatta
     1621 ttgtcggctt ttcatattga cgatgaagaa cgaatggaag gcattcgccg ccgtctgcgt
     1681 gcaatggaaa atgacggtga attggtgttc accaaaggca aacgctatgc gttgccggaa
     1741 aaaatggatt taatcaaagg tacagttatc ggccatcgtg acggttacgg ttttttgcaa
     1801 gtggaaggac acgaaaaagg ggcgactaaa agcgaagatt ggtttattcc caacgcccaa
     1861 atggtaaagg taatgcacgg tgactttgtg ctggcacaac caaacggcac agaccgcaga
     1921 ggtcggaaag aagtccgcat tgtgcgagtg ttggaggccc gtaagaaaca gattgtcggg
     1981 cgttttttcc ttgaaagcgg tatcggtttt gttgtgcctg atgacagccg cgttaaccaa
     2041 gatattctca ttccggatga acaccgtatg ggggcgagaa tggggcaagt tgtggtggtg
     2101 gaattacagg aaagaaaagc gagttttagc cgcccggtgg gaatcattac tgaaattcta
     2161 ggcgataatt tagcgccggg aatggaaatt gaaattgccc tacgcaatca cgatattccg
     2221 cacatttggc cggaaggggt agaaaaacaa atccgccaat ttagtagcga agaagtgccg
     2281 gaagaagcca agcaagggcg ggtggatttg cgagatctgc cactgattac cattgacggc
     2341 gaagatgccc gagatttcga tgatgctgta tttgccaaaa aagagggcaa cggctggcgg
     2401 ttatgggtgg cgattgccga tgtaagttat tatgttcgcc caaaaaccgc attagatttg
     2461 gaagccctaa atcgtggtaa ctcggtctat ttcccgaatc gggttgtgcc aatgttgccg
     2521 gaagtgcttt ccaatggctt gtgttcactc aatccacagg ttgacaggct ctgcttggtg
     2581 gcggaaatgt cggtttccag caaaggggaa ttacaagatt atcaattcta cgaagcggta
     2641 atgaactctc acgcccgttt aacttacact aaagtgtgga aaatgttgga aggtgatgaa
     2701 gccttgcgtg aacgctatgc tccattagtg ccgcatattg aagaactcta tgcaatgttc
     2761 caaaccttaa tgaaagctcg ccataaacga ggggcgattg aatttgaaac cattgaaaat
     2821 caatttattt tcaatccgca agggcgaatt gagcgaattg agccgttaat ccgcaacgat
     2881 gctcataaat tgattgaaga atgtatgatt ttagccaata ttgctgccgc tcgttttgtg
     2941 gaaaaagcga acgaaccggc gttatatcgg attcacgata agccgagtga agaaaaattg
     3001 ctcagtttta aatcctttgt gcgtgagtgt ggcttaacct gggacgtagg cttagatcca
     3061 accccaaaag attacggtgt actactggag caaattgccg aacgtgccga taaagagttg
     3121 attcaaacga tgttgctccg ctcgctgaaa caagcagtgt atgcggcgga taatatcggg
     3181 catttcggct tggcattaac cgaatatgct cattttacct cgccgattcg ccgttacccg
     3241 gatttactgt tacaccgtgc aattaaatat ctgatcgaaa aaggcaaagg caacactcgc
     3301 tactataccg atggcggtgg ttatcactac aagttagatg atatggacga attcggcgat
     3361 aaatgttctg ccaccgaacg ccgagctgat gaggcaaccc gagaagtggc agattggctg
     3421 aaatgcgaat ttatgcaaga tcatcttggc gaagagtttg atggcgtgat ttcgagtgtt
     3481 accggctttg gcttatttgt aaaactcaat gagcttttaa ttgacggatt ggttcatatt
     3541 tcaacgctgg ataatgatta ttaccactat gatgcggacc gacaacgttt aatcggtggc
     3601 agtgggatca tctatcgttt aggcgatgca gttagagtaa aagtaatcaa tgtgaattta
     3661 gacgagaaaa aaattgattt tgagttactc accggtaata agaaaaccgg caaaaccgcc
     3721 aagaaaaaag caaaagcgac agaggttcct gttttcaaag agcctaaaac ggtaaaaaaa
     3781 gccaaaaaag tcgctgagaa aaaaccggca aaatctgcaa aaaaacggac aaaaacgacc
     3841 gctagtaaat caaggaaaaa atagcaaatg gattacaaaa aacaaatttt attcagcctt
     3901 ttatttgctt tagtaattgc aataataagc tattttttgt ttacctatat cccgtttgat
     3961 tgtagcgatc tgagcaaact caacgattca caacgtttag agtgccgaac tgccgaattt
     4021 ctgggcgttt attactggct gccgcacact accacgctgt ttttcggctc ggtgttatta
     4081 tattgggcgg tttatggcat gatttcatta gtgcaagcag tgctcaaacg ctaacaagca
     4141 gttttgtttt tgcaaaaagt tgcaaatctc atctgaataa tccttccaag atcaaaggtc
     4201 tatcaaaaaa gatagacctt tattgtgtaa ataaactaaa actccttgat agatgtatca
     4261 catatctata aaattccagc aattaagtgg gaaaaagtgg taaattgtgg aacttttcct
     4321 taaatttaac ctcatttaaa aaggtaaatc agtaaaatgt ttcgtggtgc aagttcaatc
     4381 agcattgata gcaaagggcg gatcgctatt ccgacccgtt atcgtgccga gctattggaa
     4441 aaacatcacg ggatcttagt ttgcactgtg gatatccgcc agccttgttt gttgctttac
     4501 ccacttcacg aatgggaaat ggttgaacag aaattgttgg cactatctaa ttttgaccct
     4561 gttcaacgcc gtattcagcg agtaatgcaa ggctttgcta ccgaatgtga aatggattcg
     4621 gcagggcgaa tactgcttag ccctacactt cgccaacacg cacaattaga gcaacaaatt
     4681 atgctggttg gacaattaaa caaatttgaa atttggcaag ataaacaatg gcaagcacaa
     4741 attgccgaag atcttgcttt tggcagttcg gcagaaattt tagactgcga agcattgaaa
     4801 aacctgtctc tctagtaatt ggaaattgag atgagcgaga acccaaaaca tattacagta
     4861 ttattgcacg aagcggttga cggcttggca attaagccta acggtatcta tattgacggt
     4921 actttcgggc gtggcgggca ttctcgcttg attttatcca aactgggcga aaatgggcga
     4981 ttaatcgcaa ctgatcgtga cccacgagcg atagccgaag ctcaaacgat tagtgaccct
     5041 cgttttcaaa ttgaacatac ggcattttct gccattcccg aactgtgtga acgaatgggg
     5101 ttggtgggca aaattgacgg tattttattg gatttaggtg tgtcttcccc gcagcttgac
     5161 gaagccgaac gaggctttag ttttatgcgt gacgggccgc ttgatatgcg aatggatacc
     5221 accaaaggct tatcggcagc cgagtggctt gcccaagttt cggcagaaga tttagcttgg
     5281 gtattgaaag aatttggcga agagcgtttt gccaaacgga ttgcacaagc ggtcgtttct
     5341 tacaataaat ctgcaaatga aaaaatcagc cgcactttgc agcttgcgca aattattgcg
     5401 gatgcggtgc cgtttaaaga taagcacaaa caccctgcaa cccgttcgtt ccaagcaatt
     5461 cgcattttta tcaatggtga attagacgag ctggaaaaag ctttaaattc cgcattaacg
     5521 gtgttagccc ctgaagggcg tttgtcgatt atcagctttc attctctaga agaccgaatg
     5581 gtgaaacagt ttgtgcgtaa gcatagtaaa ggaatggacg taccccgtgg tttaccgatt
     5641 ttagaagcag agctaaccaa aaatattccg ctgaaaacca ttggcaaagc gattatgccg
     5701 agcgaagccg aaattgaagc aaatgcccgc tcacgcagtg cggtattgcg gattgccgaa
     5761 aaacgctaac agtaaatagg gaagaatatg tcgaacgaac gttatccgtt acatcaaatc
     5821 atcattgatg atatctttag ccataacaaa gtggctcttt tattgttgat tggtgtagtg
     5881 atttcagcag tggctacgat ttggataacc caccagactc gtttatcggt gagcgaacaa
     5941 gggcaactga ttcaagcaaa ccaaaagttg gaaagccaat atactaatct gcaattagaa
     6001 gaaaacagca gaagcagtcg ggcaagagtt gatgccgccg ctaaatcgtt cggattacag
     6061 ccgattaaaa aagagcaaga aattatttta gttgaataaa aaatggttaa atcagttaaa
     6121 ttaaaacgta agcaagaagc ccctgtcgca aaagcagagc ctcaacaagc agaaggtaaa
     6181 aaaacaccga gttttttacc tactcgcttt agagtggttg tgttttttat gctattaatg
     6241 gttggtggct tactagcaca aaccgcctat attcagcttt ttgactctga aagattaatt
     6301 aaagaggcta ataaccgctc acttcgtact aaagaactcc aatttacccg tggacgtatt
     6361 ttagatcgta acgggcgttt tctctctatt agtgtgccaa tgtactcatt aacacttgac
     6421 ccgagagaat actttgatac taagctgcgt cgttctaacg aaagctggcg tgccttagcg
     6481 attgaaatgg aaacatcaaa aggtaaaatt gaggcaaacg ttaataaatt tattgaaaag
     6541 aaaaattttt caaaagaaaa agtagatttt gatccacgtt ctattttaaa tactaaaagt
     6601 gaaggttatt ggactcagct tgcccaagtt acaggtttgg attacaacag tttaatagaa
     6661 aaagtacgga ataaccctag ctcggttttt ttacgtttag ataacgaaaa tttagtaaga
     6721 gaacgccaga aattccaagc gttaagcaaa gaaatcggcc gttcctataa tgacataatg
     6781 gacgagcttt atagcaaaaa ccgccagcga ttcctttact tatcccgtca tcaatctgaa
     6841 gcgatcagcg aatatgcaaa agaactagat attgatgcat tagtgattaa agtcgaatca
     6901 cgccgttttt acccgctggc agaagaatct tcacagttga tcggttttac tgataaagat
     6961 gatatgcacg gttcggaagg gctggagcgt agttttgatt ccttacttat cggcaaaaac
     7021 ggtaaacaaa ttatccgaaa agatgccaaa ggcaatattg tggaaaatat ccgttcggag
     7081 aaacagtacg atccgcaaga tgttatgtta agcattgatg aagaattgca gtctatggtg
     7141 tacggtgaaa tcaaaaaagc ggtacaggaa aataatgcgg aatcaggcac tgcggttttg
     7201 gttgatgtgc aaaccggcga aattttggca atggcaaatg ccccttcatt caacccaaac
     7261 aaacgggata gttttaaacc tgaattaatg cgtaaccgtg ctattaccga cacttttgaa
     7321 ccgggttcaa cggtgaaacc ttttaccgta ttaaccgcat tacaaaatgg ggtaacttat
     7381 cgtgatgaag ttattggcac tcgcccattt gtcgtcaatg gacatacaat taaagacgtt
     7441 gctccaaggg acagccttac gcttaccggc atcttgcaaa aatccagtaa catcggggtc
     7501 agtaaattag ccctcagaat gccggcaaat gcgttagtgg atacttacac gaaagtcggt
     7561 ttcggtaaag acaccggttt aggcttgggt gaacaacgag gtacgaacgg tgatcgcaaa
     7621 cgttgggcgg atattgaacg tgctaccctt tcctatggat acggtttaaa tgtgacccca
     7681 ttacaacttg cccgtgctta tgcgacttta ggaagtttcg ggctgtatcg cccactttcg
     7741 attaccaagg tcgatccgcc ggtgattggc gaacgggtgc taccggaaaa aaccacccga
     7801 gatgtcgtgc atatgatgga aagcgttgcg gctaaaggcg aaggcggaca ccgtgcagcg
     7861 gtggacggct accgtgtagc catcaaaacc ggtacagcac gcaaattaga aaaaggtaaa
     7921 tatgttgaaa aatatattgc ttataccgca gggcttgccc cggcaagcga tcctcgcttt
     7981 gcattagtgg tattaatcaa cgaacctaaa gcaggcaact attatggtgg ctttgtttct
     8041 gcaccactgt tctcacgcat tatgggttac accttaaaac aacgtaatat taagccggat
     8101 aacttaacgg aaaataccca aagtgccgtg cgtgaaatta aattagaacg ccctatcaat
     8161 taaggttagc tatgaaacgt ttactccctt ttctgacaga acttgatgct tgggtggaag
     8221 aactcaccga gctaaaacaa atgacacttg atagtcgcca agttcaagcc ggtgatctct
     8281 ttgttgcttt aaaaggacat caagtcgatg gcagaaaatt tattccgaat gcgatagaac
     8341 aaggagcagc aattattttg gctgaggctg atgaagatca accggaaatt gagcttgatc
     8401 cgaaatttgc aaaatttaac ctagatcgca ccgcttgttg caaggttgtc tctgttccac
     8461 gtctgccaaa attgctctct gaaattgcag gagctcttta ccataacccg tcacacaagc
     8521 tgactttagc cggcattacc ggcacgaacg gtaaaacgac tactgctcaa ttattagcac
     8581 aatggcataa tttattgggt gggaaatcgg cagtaatggg tactatcggc aacggtttgt
     8641 acggacaagt gcaagaagcg gtaaatacca ccggctctgc cattgaaatt cagcataatc
     8701 ttgcgaactt tgttgaactt ggagcggatt tttgtgcgat ggaagtcagc tctcacggtt
     8761 tggctcaatt tagagccgaa gccttggatt ttgatttagc gatctttacg aatttaagcc
     8821 gagatcacct tgattaccac aacacgatgg aagagtatgc ccaagccaaa ttccgtctct
     8881 tcaacgaatt aagcaccaaa gctcaagtaa ttaacgccga tgatgaaatc gggcgtgaat
     8941 ggctgacaca attaccaaat gcagttgcgg taagcaccga tccgaagttt gcaggcaacc
     9001 accaatttgt caaagccact gcggtaaaat ttaccctaca aggggcaagt attgcgtttg
     9061 aatcaagttg gggcaatggc gagttacata gccgtttaat cggggctttc aatgtaaata
     9121 atctgcttac cgcctttgcc ggacttttag ctcttggctt tgatattcaa gaactggtta
     9181 aaaccgcccc gaatttagtt ggcgtagcag gtcgaatgga atgcattacc gctccaaata
     9241 agccaatggt aattgtggac tatgctcaca cccctgatgc tcttgaaaaa gccctacaag
     9301 cggctcgttt acattgcgaa ggcgaacttt ggtgcatttt cggctgtggt ggagaccgtg
     9361 acgccggcaa acgcccatta atggcgacga ttgccgagaa attaaccgat aaagtgattg
     9421 ctacagacga caaccctcgc accgaagata atcaaaagat tatggcagat attgtgaaag
     9481 gttttagtaa accccaacaa attatccaca atcgtgaaga ggcaattaaa accgccattg
     9541 agcaagctaa agccacagat gtgattctaa tcgcaggcaa aggtcacgaa gattatcaga
     9601 ttattggcac agagaagtta catttttcgg atcaggaaac ggcaaggaaa tatctgtttt
     9661 aatgtcactt tctttgcaca agcaaagaaa agtgacagtg acaaatacaa aatgctcgta
     9721 attaatttta taaagaaaaa gataaatcaa tgataaaact aaccacccaa caaatcgctg
     9781 aaatcctaaa tgccaaattg atcggcaatg gcgaaactgt ggtagaaacc accagcaccg
     9841 acacccgaca agcggttgaa aacggcttat tttttgcatt aaagggcgag aactttgatg
     9901 ctcatcacta tcttcaaaat gcagtcgcac aaggttgtgt agcggttgtg gttgagcgtg
     9961 agtgtgaaat tgatgtacca caacttgtgg tggcagatac ccgtttggca ttgggggaat
    10021 tggcgaaatg gttaaaagct aagctgaacc cgaaaacggt agcgatgaca ggttcttccg
    10081 gcaaaacaac cgtcaaagag atgacggcaa aaattctgca aaaaatgacc gcttgcgaac
    10141 aggaagtgct ttatactttt ggtaacttaa acaatgactt aggtgtaccg atgaccttgc
    10201 ttcgcttaac cgaacagcat aaatatgcgg tcattgagct gggggcaaat catatcggtg
    10261 aaatcgctta taccaccgct atcgctcagc ctgatgcctg cttggtgaat aatgtggctg
    10321 cggcgcattt agaggggttt ggttcattag caggcgtggc acaagccaag ggcgaaattt
    10381 atcgtggctt gaaagaaaat ggcaaagcga ttgtcaattt agctttttat tatccgcaat
    10441 ggcaaaaaga gattggctca cgggaaatgc aatctttctc ttatatcggg tcagattcgg
    10501 attcttacgc agattactgg gcggaagatg tagaactgca tttaagcggt tcacgcttta
    10561 cgctacatac cccacagggc gaaattgcta ttgatctgcc ttatttgggc aaacataacg
    10621 tgagcaatgc cttagcggca acttcgctgg cgatgtctgt tggggcaacg ctagaagcag
    10681 ttaaggcagg gcttgagcag cgttcaatgg taaaagggcg tttgtatccg gtgcaaatta
    10741 acgaccactg tttgtttatt gatgacactt acaacgccaa tgtggattca atgaaatcgg
    10801 cgatttctgt tttggaaaat tatccggctt atcgtatttt tgcagtgggt gatatggcgg
    10861 aattgggtga agaaagtagc aaatgccacc aagaagtagc ggattttgcc aaaaatgcag
    10921 cattagattt aatcgtgagc tttggaaaag aaagtgcggt aatcagccaa caggcagaac
    10981 atcattttac cgataaacag caaatggttg atttcctact gccgattatt ttgcaaaaaa
    11041 tcgaacaaaa acaaccgctt gtattattgg caaaaggctc tcgtagccag aaaatggaaa
    11101 ccgtgatttc cgaattgtgt aaaccgttta acctaaattt ctaattattt ttaaggacta
    11161 agcaatgtta gtttggcttg cagaactatt ggttcaatat aacacagcgt ttaacgttgt
    11221 ctcttatatt actttccgtg ccattatggc gttattaact gcaatgggaa tcgggctttg
    11281 gatcgggccg aaagtaattc gccgtttgca gatcttaaaa tttggtcagg aagtgcgtaa
    11341 tgacggaccg gaaagccatt tcaaaaaacg tggtacgcca acaatgggcg gagtgatgat
    11401 tctcgcagcg attggggtga gtacattgct ttgggcagat ctgcgtaatt cctatgtttg
    11461 gttcacgctg tttgtgctat ttggctacgg tgcagtgggc tttgttgatg attatcgtaa
    11521 gatctctcgt aaaaataccg atggtttgat tgcccgttgg aaatattttt ggttatctgc
    11581 tatcgcatta gtggcggtgt ttggtatgta tgcggtgggt aaagataccg ctgcaacaca
    11641 attagtcgtg ccgtttttta aagatgtgat gccgcaactc ggtttatttt atattgtgtt
    11701 atcctatttc gtgattgtcg gcaccagtaa tgcggtaaac ctaacggacg gcttagacgg
    11761 gcttgcgatt gtgccaacta ttatggtcgc atctgccttt gcgttaattg cgtgggcaac
    11821 cggtaacttt aattttgcac aatatttaca tattcctttt attccaaatg ccggtgaatt
    11881 ggttatttta tgtactgcga ttgtgggagc aggtttaggg ttcttatggt ataacaccta
    11941 ccctgcacag gtgtttatgg gcgatgttgg ctcactttcg ctcggcggtg cattaggcgt
    12001 gattgcagta ttagttcgcc aagaattatt attggtggta atgggcggtg tatttgtggt
    12061 tgaagccctc tcggtgattt tacaagtagg ttcatacaaa ttacgccaaa aacgtatttt
    12121 ccgaatggct ccaattcacc accattttga actcaaaggc tggtctgaac cacgggttat
    12181 cgtgcgtttc tggattatca cgctaatgct ggttttagtc ggcttagtaa cattgaaatt
    12241 acgttaattg attgaataag gtgcattgag ataatgtacc ttatgttatt tttaaattac
    12301 agaataaatt atgcaaaaac aatacgaaaa caaaaccgtt actattatcg gcttaggtac
    12361 aacagggtta tcttgtgtgg atttctttaa gaaaaaaaat gccaatatcc aagtgattga
    12421 cacccgagca aacccagccg gagcggataa attggacgta actattccgt tgcataccgg
    12481 tgggttaaac agtgaatggt tgctgaaatc tgatcttatt gtaattagcc caggtttagc
    12541 cgttgccaca cctgaaattc agcaagcgat tcaagctggt gttgaaatag tcggtgatgt
    12601 tgaactgttt tgtcgggaag cgaaagctcc gattattgcg atcaccggtt caaacggcaa
    12661 aagtaccgta acgactttaa ctaccgaaat ggcgaagcaa gcggggatta aagtgggaat
    12721 gggtggcaac atcggtgtgc cggtattaag tttgctggag ggcgattatg acctttttgt
    12781 gctggagcta tccagcttcc agcttgagac aacttattca ctgaaagcaa aagctgccac
    12841 tgttttaaat attagcgaag atcatatgga tcgctacgat tcgattgccg actatcgcca
    12901 agcgaaattg cggatttacg ataatgcgga aaatatcatc gtaaacggtg aagatgccca
    12961 aacttacccg atacaagcgg tcaaaaaagt gattcgtttt gcagaacaaa atgcggaata
    13021 tagcctacgc aatcagatgc tttattcagg cgatgatgca attatccaaa ctaaacagat
    13081 gctgattagc ggccgtcata atgagatgaa tgcgttagcg gcgatggcat tagcagaagc
    13141 ggcgaatgtt cctcgtgaag gcattgtgaa agctttgcaa atttatggtg gtttgccaca
    13201 ccgtttccaa gcggtggcaa ccaatgatgg cgtgcgttgg gtcaatgatt ccaaagcgac
    13261 caatgtgggt agcacggtag cggcattaaa cggcttgaat attgccggta cactttattt
    13321 acttttaggt ggtgacggca aggctgcgga tttttccgaa ctcaaaccat taattaataa
    13381 gccaaatatt gtctgctatt gtttcgggca agatggagcg gcattggcag aattaagcga
    13441 acaaagtgtg ttggttgaaa cgatgcagca agcaattgaa gcaatccgcc cacaactgaa
    13501 aaaaggcgat atggtactgc tttctccggc ttgtgccagt ttagatcagt ttaaaaactt
    13561 tgagcaacgt ggcgaggtat ttatggcatt agcacaagga cagcacgcat aatgttagaa
    13621 agaattaagt cggaatggga taaatgggtc agattaaccc cttctaattc actttatgac
    13681 agaactctaa tttggctatt tttaggcctg ctaattatcg gttttgtgat ggtaacatct
    13741 gcttcactcc cagttagcac aaggttgaat aacgatccat tttattttgc gattcgagac
    13801 gggctgtata ttattgcttc aattatcttt tgttatgttt ttgtacaaat cccaattgaa
    13861 aaatgggaaa agcataactt ggcactgttt tttatttcaa tcggtttttt aatcgccgta
    13921 ctcattttcg gccgctcaat taatggtgca gtgcgttgga ttccgttggg tattctcaac
    13981 tttcagccgg cagaattagc caaattagcg gtcatttgct attttgccag tttctatgta
    14041 cgtaaatatg atgaaattcg taaagaaaaa gccagtttct ggcgaccggc agtgatttta
    14101 ttcttattcg gcttcttgct gattttgcag ccggatttag gtagtacctt tgtattattt
    14161 gttctcactt tctcaatgct tttcattgtg ggggcaaaaa ttatgcaatt tatgttttta
    14221 ggcgtggtgg gaacggtgtt atttgcggtg ttgattttaa cctcggaata ccgtttaaaa
    14281 cgtgttacct cctttatgga tccgtttgct gatgcttatg gcgacggttt ccagctctcg
    14341 aactcacaaa tggcatttgg acaaggtgaa ttttggggac aaggtttagg taattcggta
    14401 caaaagctag aatatttgcc agaggcacat actgactttg taatggcggt tattggtgaa
    14461 gaatttggtt tctttggtat tgcttgcatc gtacttttac ttattctatt aacggtgaga
    14521 gccttaaaaa tcagtaaaga atctttggtg ctggaagagc gttttaaagg ctatatggca
    14581 tttgggattg cgatttgggt tttcctacaa ggcttcgtaa acttaggggt ggcatcaggt
    14641 ttgctgccaa cgaagggctt aaccttccca ttagtgagtt atggtggttc gagtttggta
    14701 attatgtcga ttgcgattgc agttttgcta cgaattgacc acgaaaaccg tgccgagcga
    14761 atcgggcacg caaaaattaa aaccatctag ccgagcggtc tgcaacgtta caatttgcaa
    14821 aattttacaa aaatgagacc gcttgtatta gctggaaagc ataaaaattc agtaaaatag
    14881 cacgttttag aataaaaaag agttgaaaat ggcgaagaaa ttattagtaa tggcaggtgg
    14941 aacagggggg cacgttttcc ctgcaattgc cgtagctcga gagctacaaa aacaaggctg
    15001 gcaaatccgc tggctgggga cgaaagaccg aatggaagcc actcttgtgc cgaaacacgg
    15061 tattgagatt gattttattg aaatctcagg cttgcggggt aaaggcgttg cagcattgtt
    15121 gaaagcaccg tttgctattt ttaaagcggt gatgcaagcc cgcaaaatca ttaaaaatta
    15181 tcagcctgat gcggtgttgg gaatgggcgg ttatgtgtcc ggtccgggcg gtattgcggc
    15241 taaattatgt ggcgtgccgg tgattttaca cgagcaaaac gcagttgccg gcctaaccaa
    15301 tgtgtggcta tccaaaattg cccgcaaggt gttacaggct ttccctactg cttttaaaga
    15361 ggccgaagta gtaggtaatc ctgtacgtga agatttatct gctcttccgc tgccgaatga
    15421 acgtttcgcc aaacgaggct acccgattaa cattttagta atgggtggca gccaaggggc
    15481 aagagtgatc aaccaaaccg tgccggaagt ggcaaaagtg ttgggtaata atgtgtttat
    15541 cagccaccaa gtcggtaaag gtaatttagc cggtatcgaa gaagtctatc aacaaaccgg
    15601 caatgggatt gcttccgagt ttattgatga tatgaaagcc gcgtatgagt gggcagattt
    15661 ggtgatttgt cgttccggtg cgttaacggt gtgtgaaatt gccgccgtag gtctgcccgc
    15721 tgtgtttgtg ccgttccaac ataaagacag gcaacaattt ttaaacgcta actatttggc
    15781 ggcagatgga gcagcagtga ttatcgaaca gagcgatttc actccaaagg cattacagca
    15841 agccttagaa cccttaattg ccaatcgcca actcttattg gatatgtcaa tgcgagccag
    15901 agcaaaatcc accccaatgg cagcaaaacg tgtagcggaa gtgattattc aagaagcgaa
    15961 ttaacttact acaagcggtc gtttttggta aaaattttgc aaaatgtaac cgcttgcgaa
    16021 tagattaaaa ggacaataaa tgaaaaattt ccaagataaa gtcaaaaaat tagtgcctga
    16081 aatgcgtcgt gtcagccaaa ttcattttat cgggattggc ggagccggta tgagcggcat
    16141 tgcggaagtg ttattaaacg agggatacca aatttcaggt tcggatattg cagacagagc
    16201 ggttacacaa cgtctatccg cagccggagc gaaagtcttt atcggacacc aagcagaaaa
    16261 tattgctggg gcgagtgtgg tggtggtttc tactgcgatt gatgaaacca accctgaaat
    16321 tattgccgct cgagaagctc gaattccggt gattcgccga gcagaaatgc ttgccgaaat
    16381 tatgcgtttt cgccacggca ttgcgattgc aggcacacac ggtaaaacca ctacaaccgc
    16441 aatgatttca atgatctaca ccgaagcaaa attagatccg actttcgtga atggcggttt
    16501 ggtaaaatct accggcaaaa atgctcattt gggggcgagc cgttatttaa ttgccgaagc
    16561 cgatgagagt gatgcttctt tcttgcactt gcagccaatg gtgtcggtag taaccaacat
    16621 tgagcctgac catatggaca cctatggtgg cgattttgag aaaatgaaag agacttacgt
    16681 acgatttttg cgtaacttac ctttctacgg cttagcggta atgtgtgccg atgatgaaac
    16741 ggtaatggaa attgctcctc gtgtcggcag acaagtgatt acctatggct ttagcgaaaa
    16801 tgcggattac cgaattgaag attaccagca aaccggcttc caagagcatt acaccgtagt
    16861 ttgcccaagc ggtgaacgaa ttgatgtgct gttgaatgtg ccgggtatgc acaatgcctt
    16921 aaatgcaacc gctgcgttag cggtggcaaa agaagaaggg attggcaatg aggcgatttt
    16981 agctgcttta gctgatttcc aaggggcagg acgccgcttt gaccaattag gttcatttat
    17041 tcgcccgaac ggcaaaatta tgttagttga tgactacggc caccacccaa ctgaagttga
    17101 tgtaaccatt caagccgctc gttcaggctg ggaaggtaaa cgtgttgtga tgattttcca
    17161 accgcaccgc tattctcgta cccgtgattt attcgatgaa tttgtacaag tactgtctaa
    17221 agtcgatgcc ttgattttat tggatgtgta tgctgccggc gaagctccga ttgtgggggc
    17281 agacagtaaa gccttagccc gttcaatccg taatttaggt aaggtcgatc cgattttggt
    17341 ttcagatacc gatcaacttg gcgaggtatt agatcaaatt attcaagacg gtgatttaat
    17401 tttggcacaa ggtgcgggca gtgtaagccg catttctcgt ggcttggctg agagctggaa
    17461 aaattaaata ctctctcccc ttgcgggaga gagaccgaaa aatacttcgt tcagaagtat
    17521 ttttcagaga gagggtatat atttaaagga tttcaaatga gtattaaaaa cgaaaaaatt
    17581 gccgtcttat tcggtggcgt ttcgcaagag cgtgaagttt cactgaattc tggtgcagcg
    17641 gtaacagctg cattaaaaag tttaggctat aacgtagaag gcattgatac taaagaattc
    17701 ccgattgaaa aattaaaaga aaaagggatt cagcgtgtat ttaatatttt acacggcggt
    17761 attggcgaaa atggcgtact gcaaggtgcg ttagagcaaa tgggtattcc ttacaccggt
    17821 tgtggcgtaa tggcatcagc agtgacgctg gataaattcc ggactaaatt attatggaat
    17881 gcagtaggtt taccaacagc ggatatggtg gtggttcagc gtggacaagc ggtcgatttt
    17941 gaccaaatta ttgcaaaatt aggcttaccg gtatttgtga agtcttcgtg tgaaggctca
    18001 agtgtgggtg tattcaaagt aaaaaccaaa gaagaattgg caccggcaat tcacgaggca
    18061 ttaaagtttg attccattgt gttggtggaa gaatttttag ccggtaatga atattctgta
    18121 ccggtattag acggacaagt tctaccggcg gtacaagtaa ttccggacgg cgaattttat
    18181 gactaccacg caaaatatgt gtcggataac acccaatatg tagtaccggc attaaatgac
    18241 gaacgccaag cagaggtcgc caaattagtg aaagcggctt acgatgtggt tggctgtcga
    18301 ggttggagcc gtattgatgt gatggaagat ggcgaaggaa aattccgctt ggttgaagta
    18361 aataccaacc cgggaatgac cagtcacagt attttcccaa aatcagcagc aacagttggt
    18421 atttcctttg aaaaattagt tgaacgcgta ttggagttaa gtgcttaatg ggcatcttcc
    18481 gcaagaagaa cagcacaaat gtgcgtttga atgttcttaa tccaaaaaca cctgtttctc
    18541 cacgtaaatg gctagtattc attaagccat taattgtgtt attatgtaca ctatttgtat
    18601 tcggtgtgta tagtaattgg caaaatatac tcgaaagttg ggataaaaca ccgattcgcg
    18661 cttatgcatt aacacataaa acacaattta caacaaatgc agatattcgt gaaactttgt
    18721 ctaaagaacc tgctctaaaa ggatatttcg gacaaaatat tcaagaggtc aaagataagc
    18781 ttttatctat accttgggtt aaagatgtgg ctgttcgtaa actttatccc gaccgattaa
    18841 gtattacttt gctagaacat aaacccgttg caatttggaa tgatactaac tttgtctcag
    18901 aacaaggaac cgtctttagt ttaccgaaag acagaatcga taaaaatgga cttccattac
    18961 tctatggtcc agatacggaa ggaaaaagtg tattagaggc atggaataaa atccgagctg
    19021 atctaaatgc ccgcaacttg gatttaacct ccgtttctgt agataatcga ggttcttgga
    19081 caattaggct ttctaatcaa gtagaattaa gattaggaag aggggaatgg acttctaaaa
    19141 ttgatcgttt tgtaacaatc tttcctgaaa ttcatatacc tgaaggtaat agattagctt
    19201 atgttgattt acgttatcca catggcgcgg cggttggatt tagtcctata aaaaattaaa
    19261 ctcagtgaac acaaaaacat tatgacaaaa gcagtagaat caaaaattat cgttggtctt
    19321 gacattggga catcaaaggt tgttgccgtt gttggtgaag tattacctga tggtgtaatt
    19381 aatgttatgg gagctggcgt ttgcccttct aaaggagtcg atcgaggtgg cgttattgat
    19441 cttgacgctg ccgttaattc tattcaaaga gccattgagc aggcggaatc tattgccgat
    19501 tgtcaaatta tgggtgtaac actggcaatc tcaggtcagc atattgttgg tttaaatgaa
    19561 gcaggatcat caacattatc tggaggtatt gttacccaag ataatattga aagtgctgtg
    19621 gatatggcaa aggcaattaa attacaagat ggcttagaaa cattacacat gattccacaa
    19681 gaatatcacg tggatagatt gcctgcgact aaaaatccaa ttggcttatc gggtatgcgt
    19741 ttacaagttc aagcacactt aattgcttgc catcaagctt ggttaaaaaa cttaaaaaat
    19801 gcggttgaac atgctaaatt aaaagtcgat caagttgtat tttcaggtct tgcctctagc
    19861 tattctgttt taactgaaga tgaaaaagag ctgggtgttt gcttaattga tattggtggc
    19921 ggtacgatgg atgtactagt ttataccgat ggagcattaa gatacagtaa agtcattcca
    19981 tttgcaggta ataacattac tgattatttg gctcgtgtat ttacgacatc tcgccctgaa
    20041 gctgaaagcc ttaaagtagg ttatggtagc gcaatttcgc ctccaaccca taattcagat
    20101 aaaaaaattg aggtggcagg actaggtgga cggatggcaa gaacctttac ccgagctcag
    20161 gtggcaacgg ttacctcaca atgttataac gatttgctaa aagttgttga agaggaatta
    20221 acccaattac gccatgaact tttccaaaaa ggaataaaac aagagttaat tgccggtgta
    20281 gtcattactg gtggtggctc acaaattgaa gatattgtag aatgtgctaa atcaattttt
    20341 ggttcacaag ttcgtgttgg atatccactc aatattactg gcttaaccga ttatgtgaat
    20401 aaaccacaat atgcaacagc attagggctt ttacaatata gccactataa ttatactgaa
    20461 caaggtacaa gtacagattc taatgaagat atctttgctc ctattggtcg tggaaccaag
    20521 aaaatcattg acttcttcaa atcaaaattt taatagtgtt aaaataaaca cgcagggaga
    20581 taaaaatgtt tgaacctatt attgaacaaa cgcaagatgc tatcattaag gtagtgggtg
    20641 ttggtggcgg tggcggtaat gccgtagaca gaatgtctcg ctctgccgat gatattaaag
    20701 gtgttgaatt ctttgatgta aatactgatg ctcaagtttt aagaaaaaga accacacgcc
    20761 aaactatcca aattggagca agtacaacta aaggtttagg tgcaggtgct gatccaatgg
    20821 taggaaaaca agctgccgaa gaagatcgtg aggctatcgc taatgcatta aaaggtgcaa
    20881 atatgacctt tattgctgtt ggtatgggtg gaggtaccgg taccggagca gcccctgttg
    20941 ttgctcaaat tgccaaagag caaggctcac taactgtagg cgttgtaaca aaacctttcc
    21001 gcttcgaagg gcctcgccgt atgcgctttg cagaccaagg cattaaagag ctttctcaat
    21061 atgttgattc tcttattata attcctaatg ataaattacg tggtttaggt aagcaaacaa
    21121 cagcagtaga tgcctttgcc gcagcaaatg atgttttaag taactgtgtg cttggtatta
    21181 ccaatatgat taccagttcg ggcggttcta ccggtgcaga tattaacgtg gacttcgcgg
    21241 atgttcgtac agtaatgtct ggtaagggac acgctatgat tggtacaggt tttgctgaag
    21301 gtgaagttgg tgaaggacga gcggaaaaag caatgaatga tgccatttct agtccattac
    21361 ttgaaaatgt ggatatttca ggtgcaagtg gtatgctcat caacattagt gctgggacag
    21421 atttcttatt agaagaagtt tatgctatga tggacttaat ttatggcttt gcaacagaag
    21481 atgccgcaat tgtatttggt tgtaactatt accctgaaat ggatggaaaa gtgagtgtca
    21541 ctcttgtcgc aacaggaata ggccaacctg aggaagctct acatatgcca cataaggctc
    21601 agccagtata tgcacagcaa ggaaatcatg ttcaagctac acagcctact cagccaaacc
    21661 atgcggtaca acaaccaaac tttactcaac cgtcaagtta tggtcagcca aatcaattta
    21721 gtggtcaacc acaaccacta caacaacctg tggctccaaa accacaatcg gttgatacag
    21781 cacaaatttt taacccaaat tcaattccgg gttttatgag aaatagtcaa taacttccac
    21841 tcatttcgga agtaaggaca aaatatgact aaacaaagaa cattaaaaca agcagcaaaa
    21901 gtaacaggta ttggcttaca tagcggcaaa aaagtaacct taacgttacg ccctgcccca
    21961 gctaatacag gagttattta tgcccgtacc gatttagagc ctgtcgttta tttccctgca
    22021 agcgcagact ctattcgtga tacacaatta tgcacatgta tggtaaatga tgatggtgtt
    22081 cgtatttcaa cagtagaaca tttaaacgca gcaatgtcag cattaggctt agataatgtt
    22141 attgttgaag tagatgcacc tgaaattccg attatggacg gtagttcaag cccatttatc
    22201 tatcttttat tagatgccgg catcgaagaa caagatgcac cgaagaaatt tattcgcatt
    22261 aaagaaacag tacgcgttga agaaggcgat aaatgggccg aattaaaacc atacaataaa
    22321 ggttttaaat tgaacttcac tattgacttt gagcacccat taatccccaa aaatgtaggg
    22381 agctattcca ttgatttttc tgctgagaac tttattcagc aactaagtcg agcgagaacc
    22441 tttacattta tgaaggatgt agaatacttg caatctattg gtcttgcatt aggtggaagc
    22501 cttgataatg ctattgtatt agatgattac cgaattctaa atgaagacgg tttacgattt
    22561 aaagatgaac tggttcgcca taaaatgctg gattcgatag gtgacttata tatgtgtggt
    22621 tataatatcc taggtgaatt tagtgcatat aaatcaggtc atggcgttaa taataaatta
    22681 ttaagagctg tattggaaaa taaaaacgct tgggagtttg ttacctttga agataaagca
    22741 gaagtcccac aaggttacca agtacaacaa gaaattttta tttagtctaa atggcttaaa
    22801 agacgaacag aaatgttcgt cttttatttt gcaaattttt tctaatattt aaccgcttgc
    22861 aacccgcctc attagcgatt ttttcgccct tatctattta ctgtttaaaa aaacagttgt
    22921 actatatacc catacagtta atcttgtgtg gtgtattatg cttactcaac ttactattaa
    22981 taattttgcg attgttcgcc atcttattct tgaattaaat gaaggtatgt ctgttattac
    23041 cggtgaaacc ggtgccggga aatcaatcgc tattgatgcc ttagggctat gcttgggtta
    23101 tcgttctgaa agtgggatga ttagaaacgg ttcggacaaa gcagatataa gtgcaacctt
    23161 tactatgcag ccacatagcc ctgcttattt atggctacaa gagcatgaac tgcttgatga
    23221 agataatcct caagagtgta tcttacgccg tatgattaat attgatggac gctcaaaagc
    23281 ctttgtaaat aaccgatcat tacctgtttc acaacttcga gagttggggc aatatcttat
    23341 tcatttaaat gggcaacacg caccacaatt actcctaaaa aacgaatatc aacttgaaat
    23401 agtcgatcat tatgccacgt tacagcctct attgatgaag atggcaaagc aatatgggaa
    23461 ttggaaagaa ctgaataagc aggtaaaaaa tttccaaaaa cagtgccaag aaaatgaagc
    23521 tcgcaaacag ctattagaat atcaagttga ggaattagat gaatttgcaa ttaaagcaaa
    23581 cgaatttgaa gaaatggaag agaaatacaa tatcttgtct tcttccgagg agcttactga
    23641 gctttcagat gaaatcacac gcttattaag tgatgatgaa atcaatgcaa acagtctgat
    23701 ttataaagcg ttacgcaatg cagaaaactt ggctgaggtt gatagccaat atcagggcat
    23761 tttagatatg cttaatgagg ccctgattca gattcaagaa gcaagctccg aagtggctca
    23821 attagccagt aaaattgaac aagatccgga attactacag gagctggata atagaattgc
    23881 acaaactata tcgttagcac gcaaacacca tattcaaccg aatgaattat ggcaatatca
    23941 cgcgacatta aaagcagaac tacaggaatt actggatttt gaagataatg aagaacaact
    24001 cattcaaaat gaaaaacaag cttaccaaga gtgtataaca ttagcagaag aaatttacca
    24061 aaaacgtcta gatgccacac ataagctctc tgaacaagta acaaaacaaa ttaaacactt
    24121 agcaatggaa aacggtgagt tctttattca tatagaacat aatcttgaaa aaatgtctgc
    24181 aaatggtgct gactatgtcg agtttaattt acgcagcaat ttaggacaac aaccccaacc
    24241 actggcaaaa attgcttctg gtggtgagct atctcgcatt tctctggcag tacaagtgct
    24301 taccgcaaat aaactttcta cgccaactat tatttttgat gaagttgatg ttgggattag
    24361 tggctctgct gccactacag tcggaaagct actgcgtaag ctaggcgaaa aatgccaagt
    24421 attatgtgta acccatttac ctcaagtggc aagttacggc aaccagcagt ttaatgtaca
    24481 aaaatatgta gaaaataatc aaactgaaac gcaaatgaca ttactcacag aagcagagcg
    24541 tattcacgcc ttggctcgac tattaggcgg aagcgaaatc accgaaacgg ttttagctaa
    24601 tgcaaaagaa atgctaaatt tagcgaaaaa taacgaatag ccaaaaagaa aaatcgcatc
    24661 aatgaatatt gatgcgatta tgaatttggt ggaggtaaac gggatcgaac cgatgacctc
    24721 ttgcatgcca tgcaagcgct ctcccaactg agctataccc ccttaataca agcggaataa
    24781 tatgctttcc gcttgaagat gtcaatggct ttaatcaagc aaggtgttga ttgattaaaa
    24841 actagctatt cgcctgaata aactcaatcg ctttttgtaa gcgagctaag gttctttctt
    24901 taccgactaa tttggcggtg atatccattg acggcgattg cccacttcct gttaccgcta
    24961 aacggaacgg cataccgact ttgcccatac caatttccag ctcggcagcg gtttggttca
    25021 ttgcctcgtg gatattttcc accgtccagt cattgcaagc ggtcaatttt tccaataatt
    25081 ttgcaagtgg agcaacggct tcggctttga agtttttagc agcagctttt tcgtcgtaag
    25141 ccttaaattc ttgatagaaa tagcggctgc tttcggcaag ctcttttaag gttttgcaac
    25201 gttcgcccag tacagggata atttcttcca attttggacc gcttgtgaaa tcaatgcctt
    25261 gagtttgcat atgccattca agatgttttg ccacataact tggggcaaga ctgcggatat
    25321 agtgttggtt caaccattgt aatttttcag tgttaaatgc acttgccgat ttactgactg
    25381 aatgaatgtc gaacagctcg atcatttcgt cacgagagaa aatctcttgg tcgccgtgtc
    25441 cccagcctaa acgcacaagg tagttaatta aggcttccgg tagatagccg tcatcacgat
    25501 attgcattac gctcaccgca ccgtggcgtt tggagagttt ttgcccgtca tcgccgttga
    25561 tcattgaaac gtgggcgtag gttgggattg gtgctcctaa tgctttcaaa atgttgattt
    25621 ggcgtggtgt attgttgata tggtcttcac cccgcacaac gtgagtaatg cccatatccc
    25681 agtcgtccac caccacacag aaattgtagg tcggcgagcc gtcagtacgg cgaataatca
    25741 agtcatctaa ttcgctattg gcgatttcaa ttcgcccacg caccgcatcg tcaaatacta
    25801 ccgagccttc ggtcgggttt ttgaaacgca caacatgtgg ttggctcggg tcgttttgcg
    25861 gattgtgtaa gcagtgctga tcgtatttcg ctttctcttt atttgcttct tgctctgcac
    25921 gtacttcgtc taaacgttct ttcgagcagt agcaacggta tgccgtgccg gcttctaaca
    25981 tttggtcgat cacttggtta tagcgatcga aacgcttggt ttgaaagtat gggccgtgtt
    26041 cccacgccaa atccagccat tccataccct ctaaaatagc ggcggttgcc tcaggggttg
    26101 agcgttcaag atcggtatct tcaatacgta acacaaattc accatcatta tgcttagcat
    26161 ataaccaaga gtagagcgcg gtcctcgccc cacctacgtg caagtagcca gttgggctag
    26221 gtgcaaaacg ggtacggact tttacattcg gatctaaggg gaaaagggtt tcaattttca
    26281 ttttatattg cctaattgat gattcttaag aaaaacttgt ctattttact acgcttgagg
    26341 gtgaatcata gtaaaaaatt aaatttgcgg ggtaaaaaat cagcaaacgg ggtaaaaaga
    26401 acaaaaaggg tttgacgaaa cagcaaaaat ctctataatt cacttccaca acagcgggcg
    26461 attagctcag ttgggagagc acctccctta caaggagggg gtcactggtt cgagaccggt
    26521 atcgcccacc acttcaactt aagtgtttcg ttgttgtatc acaatctaat tttgaaaacg
    26581 ggcgattagc tcagttggga gagcacctcc cttacaagga gggggtcact ggttcgagac
    26641 cggtatcgcc caccacttca acttaagtgt ttcgttttca aattcccttt gattttaagt
    26701 ctcaagtggg cgattagctc agttgggaga gcacctccct tacaaggagg gggtcactgg
    26761 ttcgagaccg gtatcgccca ccacttaaga ctaaaatcat aaacttcaaa tggcgatttt
    26821 tcgtatctga agggcgatta gctcagttgg gagagcacct cccttacaag gagggggtca
    26881 ctggttcgag accggtatcg cccaccatct atttagtatc aaagcctaaa acttatatca
    26941 taatctaata acccctttaa agtcataact aaaaagggaa aataaattca gatggcctgt
    27001 tgcatctgca taaatgcctt tctacgtgca gaaattaatc tttttctatc tttaatttgc
    27061 ttaatttgac gcaggcgtaa tttccttgtc agtagggatt tctttttctt caattttctc
    27121 ataagaagaa ttctcctgtt ttatttgacc atctggtaaa ttttcttgtt cttgcatctt
    27181 ttgctcttca actcgttgat aattaataat actaccataa taacgccgta tattttcaac
    27241 atactgtaat gcttcatatc ctcgagcata gccgtatttt agattagcat aataacgttt
    27301 ttccgcaagc aatggcagat tctttttaac atcaagccaa ttatccggat caccaccaag
    27361 ttgttttgtt aatcgacgaa gatccaacaa gtgccccaat cccatattat acgctgctag
    27421 gctataccaa attctatctg cttgaggaat agtttccggc atttgtctca ttagcatatg
    27481 taaatattca gatcccgctt tgatactttg tgcagggtta gtcctatcag aaattttcat
    27541 tctatctgcc gtatcttttg tcagcatcat aattcccctc actccggttg gagaagttgc
    27601 attaggatcc caatgagact cctgataggc gatagccgcc agcatttgcc attctaattc
    27661 acctttatgt gcccgaaaaa ggggttcata tttaggtaaa atagttttaa ttgcattcaa
    27721 atagctctga atatcaacat aatcaaactt agctaaatga ttaaaatatt tctcttctat
    27781 tcttgatatc agcccagttt ccatagaata agacataaaa tccagcagca cagattgcag
    27841 ttcactataa gaactatttg ctaaatacca taacactggg ttttcatcag ttaaatcaaa
    27901 ccctacggct aaattaggat taatatgctg tgcagcagaa atatcaaccg acattgcaat
    27961 tgtatgtgaa atttcacctt gtgcgacttt taacaatagc tcttcttgtg taaatttatc
    28021 cgagatctgc cattttagtt ccggattatc caccttaagc tgatttaata ttggaattac
    28081 cgcagaaccg gctggaataa tcacattttc ccgcaaatcg gaaagtcgat atggtctagc
    28141 acttcccttt ttataaacaa gctgccaaga agccgaataa taggaaggac ctatctgaaa
    28201 ttcatcgttt aattcagaat ggtaaagcag cccagcggca gcaatatcaa catcattatt
    28261 tcttaaggcc tcaaacaatt tctcgctact atcataagtt ttaatatcaa gattgacctt
    28321 taaatattga gcaaaggctg ttgctaaatc atattcaatg ccactttttc cttcaggacc
    28381 aacaaagtaa gaaagtggat ggttgatcat tccaaccttt aacgttttgc tttgctgaat
    28441 ttgtgtataa tgatttgctt ctgaatgaat gattttttgc caaggaaaaa tcatatccca
    28501 agcccacagt aacaatgcta cggcaataaa aaggcgagca attaatcctt tcaatttaaa
    28561 atcctcatta tttcaagcta agcattaagc ctatctgaaa ttacaaat
//
LOCUS       DANLXD010000020        28581 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.020, whole genome shotgun sequence.
ACCESSION   DANLXD010000020 DANLXD010000000
VERSION     DANLXD010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 28581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28581
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.020"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..270
                     /locus_tag="PXD18_000710"
     CDS             <1..270
                     /locus_tag="PXD18_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HDL6301166.1"
                     /translation="ELIESLASKNPSLPIKMVEHCVKELLEQLTATLEEGERIEVRGF
                     GSFSLHYRQPRLGRNPKTGESVLLGAKYVPHFKAGKDLKERVDLL"
     gene            307..594
                     /locus_tag="PXD18_000711"
     CDS             307..594
                     /locus_tag="PXD18_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1049 domain-containing protein"
                     /protein_id="HDL6301167.1"
                     /translation="MIKYILGILIVIAVIIVAVTIGANNDQLITFNYIFAQSELRLST
                     LVAILFGLGLILGWLVTGIFYLKIKFQNVALNRRVKRQAQQITELTTPKAE"
     gene            598..1794
                     /gene="lapB"
                     /locus_tag="PXD18_000712"
     CDS             598..1794
                     /gene="lapB"
                     /locus_tag="PXD18_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HDL6301168.1"
                     /translation="MLELLFLLLPIAALYGWYMGQRSAKKDQETASNKFSREYVTGLN
                     FLLSNQQEKAVDLFLSMLQKQESENHIASESQFEAELTLGNLFRSRGEVDRALRIHQT
                     LVNSPHYSFDQKLLAKQQLAKDFMVAGFYDRAENYYISLVDEPEFAKYSLSQLAVIYQ
                     KTREWKKAINVTEKRLRIEPDADKIPLSHFYCEYAQGVKFDDKAAFIESLNKALEYYP
                     QSTRASIILGDFYLEEGEYLRALSYFEQILVQDPDYISEVLGRIKQSYMALEDLNGYE
                     LFLIRANRVKHNSSVDIALTEFIEEKDGINAAHSKLYQQLSTYPNLITFHRFIRYQAD
                     FAEEGNGKESLVLLHNMVGNQIKRSFQYRCLNCGYQSYRLMWQCPSCNQWEKIKPVQS
                     IEGIIQ"
     gene            1818..2510
                     /gene="pyrF"
                     /locus_tag="PXD18_000713"
     CDS             1818..2510
                     /gene="pyrF"
                     /locus_tag="PXD18_000713"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HDL6301169.1"
                     /translation="MNNKVIVALDYETEREALEFVDLVDPSLCRLKVGKEMFTTLGTN
                     FVKQLHERKFDVFLDLKYHDIPNTVARAVRSAADLGVWMVDLHASGGLAMMEEAKKIL
                     EPYGKEAPLLIAVTVLTSMEDLDLLQIGINASPMEQVIRLAHLAQRAGLDGVVCSPQE
                     VEVLRTHCGQDFKLVTPGIRPKGTDFGDQRRVMTPKQAVETGSDFLVIGRPITQAQDP
                     LAVLKSINQSIS"
     gene            2593..2904
                     /gene="yciH"
                     /locus_tag="PXD18_000714"
     CDS             2593..2904
                     /gene="yciH"
                     /locus_tag="PXD18_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response translation initiation inhibitor
                     YciH"
                     /protein_id="HDL6301170.1"
                     /translation="MTLVYSTETGRIKSEVIKEERPKGDGIVRIQRQTSGRKGKGVCL
                     ITGLDLEDKALNSLASELKRKLGCGGSFKDGVIEIQGDNRGFIKQILEQKGFKVKLAG
                     G"
     gene            3007..5169
                     /locus_tag="PXD18_000715"
     CDS             3007..5169
                     /locus_tag="PXD18_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDL6301171.1"
                     /translation="MWKKTLIAVFLASQYAFAVGTGKEPSKSYTETELKQLKNDWLAI
                     YQKELQYAENLRLKQRENFQQINYLADAAISQKNLSLSTEQIIQRLLLTLAGYPLEMK
                     AEWKLLNAKITLKQATESEVKAFISKYPDSLYQRQLQNLMFELLYREQKFPELLEYAQ
                     NVKQSSLADQCRLFSARYELAASKAQINPEVSQVTEQKAENAELLALVQEFDRFWLAT
                     PKLTSDCANLESYWRDQGLKTDEKMRLKAVELIKQNANAELANLAANVNNENLKIWLS
                     SVEKVANNPADLQNFIENQPLDSPFYADNKAIIQQLFAKYVRTLSENMENPSFQQYQT
                     WAEKYQLSSEEINGWKNAFITRFFDNPEPTFQFWRDEQIKLLKTDNLTERRLRMAIWQ
                     KADLNEWLVLLSQQAKEKAEWRYWAAKEEKNEAKRKVDFESLAKERGFYAMLAAQQLG
                     IVYQIPMLEVPELTQAQLELYANQLARIQELRELGQFDQARKIWIDWIKNIKPEAGEN
                     TPTKIQLALIKYAKDKNWYDLAVEGTIQTKAFDYLDLRLPNAYSDWFDLHLQDKKISK
                     TFAQAIARQESAWNAQAQSHANARGLMQLLPTTAQKTAKDNGLTFKDGNDLFQPFNNI
                     MLGTTHLMELNEKYPNNRILIASAYNAGAGRVEQWLKRSNGQLAMDEFIASIPFYETR
                     GYVQNVLAYDYYYQMLYSDINDKNGLKMFYQEELTRKY"
     gene            5218..5294
                     /locus_tag="PXD18_000716"
     tRNA            5218..5294
                     /locus_tag="PXD18_000716"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5252..5254,aa:Met,seq:cat)
     gene            5521..5982
                     /gene="rimP"
                     /locus_tag="PXD18_000717"
     CDS             5521..5982
                     /gene="rimP"
                     /locus_tag="PXD18_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HDL6301172.1"
                     /translation="MATLEQKLEDLVLDSIEALGFELVGIECQRAGRFLTVRLYIDKE
                     GGVTIDDCSDVSRQVSAIFDVEDPIADKYNLEVSSPGLDRPLFTVAHYERFIGQDVVI
                     HLRIPMFDRRKWQGKIKQVEGDFITLTVENEDRQFAFGNIQKANLVPVFNF"
     gene            6003..7499
                     /gene="nusA"
                     /locus_tag="PXD18_000718"
     CDS             6003..7499
                     /gene="nusA"
                     /locus_tag="PXD18_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HDL6301173.1"
                     /translation="MSKEILLAAEAVSNEKQLPKEAIFEALETALTIATKKSRDLDID
                     VRVVVDRKTGDFQTFRRWAVVENVNNMTREISLEAAQFEDPNVQLGDFIEDEVESIEF
                     GRVAIQTFGQVVKTKIREAEKTKIIDEFRSDLGKIILATVKKVTRDNIFLELQGKSED
                     IKGEAVIVREDMIPRENFRPGDRVRGVLYEIKPESKGPQLFVTRAKPVMLEELFKLEV
                     PEIGEGVIEIKGSARDVGSRAKIAVKTHDKRIDPVGACVGMRGARVQAISNELGGERV
                     DIVLWDENPAQFVINAMAPADVSSIVINDETHSMDIAVEAKNLAQAIGRNGQNVRLAT
                     QLTGWALNVMTVEELTKKSEEEDGKVINLLTSALEIDEEFAQVLIEEGFTSLEAIAYV
                     PVDTLTAIDGLEDEDLVEELQSRAKNAITKKALEEEKLLKSAQIEEKLLTLEGMDRHI
                     AFKLAEKQITTLEELAEQGVDDLADIEELSEEKAGELIMAARQICWFN"
     gene            7484..10051
                     /gene="infB"
                     /locus_tag="PXD18_000719"
     CDS             7484..10051
                     /gene="infB"
                     /locus_tag="PXD18_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HDL6301174.1"
                     /translation="MLVQLSKEDNKMTEEKKTLSLGGARKASKVNTTTTSGKVKAVEV
                     KEKKPKIDAKALQEKAAKEAAAAKARAEKEAAEKLAKEKAEAEAKEKAAKKAAESTAS
                     KPISVPVMPSSKAKEEKPKAQQVQPKQEKAVDPEKEAKRKEEAELRRKQEELAQQKAE
                     MEAKRAAENARRLAEIAREEAEDNGNEDFDDERFTSSYAREAERDNDRRSEGNRGRNG
                     KGNVAKAKKGGREEDKNERSADRRNHKEVKGKGKQGKKGAALQQAFTKPAQVVKADVV
                     IGETITVAELANKMAVKATEIIKMMMKMGEMVTINQVIDQETAQLVAEELGHKVILRK
                     ENELEEAVLEDRDTHAEKVTRAPVVTIMGHVDHGKTSLLDYIRKAKVAAGEAGGITQH
                     IGAYHVETDDGKMITFLDTPGHAAFTSMRARGAKATDIVVLVVAADDGVMPQTIEAIQ
                     HAKAAGAPLVVAVNKIDKPEANPDRVEQELLQHEVISEKFGGDVQFVPVSAKKGMGID
                     DLLEAIILQSEVLELTAVKDGMASGVVIESYLDKGRGPVATILVQSGTLNKGDIVLCG
                     FEYGRVRAMRDENGKDVESAGPSIPVEVLGLSGVPAAGDEATVVRDEKKAREVALYRQ
                     GKFREVKLARQQKAKLENMFSNMAAGDVAELNIIVKADVQGSVEAISQSLMELSTDEV
                     KVKIVGSGVGGITETDATLAAASNAIMVGFNVRADASARRVIENENIDLRYYSIIYEL
                     LNDVKAAMSGMLQPEFKQEIIGLAEVRDVFRHPKFGAIAGCMVTEGIVKRNNPIRVLR
                     DNVVIFEGELESLRRFKDDVSEVRNGMECGIGVKNYNDVKVGDQIEVFEVVEVKRTI"
     gene            10136..10516
                     /gene="rbfA"
                     /locus_tag="PXD18_000720"
     CDS             10136..10516
                     /gene="rbfA"
                     /locus_tag="PXD18_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HDL6301175.1"
                     /translation="MSREFKRSDRVAQELQKEVAVILQREVKDPRIGMVTVSDVEVSR
                     DLAYAKIFVTFLFDNDAEAIKQGMQGLEKASPYIRTLLGKAMRLRIVPELRFIYDESL
                     VEGMRMSNLVSSVIKNDEEKHKED"
     gene            10519..11442
                     /gene="truB"
                     /locus_tag="PXD18_000721"
     CDS             10519..11442
                     /gene="truB"
                     /locus_tag="PXD18_000721"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HDL6301176.1"
                     /translation="MSRPRKRGRDIHGVFLLDKPQGMSSNDILQKVKRIFQANKAGHT
                     GALDPLATGMLPICLGEATKFSQFLLDSDKRYLVTAKLGERTDTSDAEGQVVETKAVA
                     VTKSQILAALEKFRGDILQVPTMFSALKHNGKPLYEYARAGITVEREARPITIFELNF
                     IEYKAPFLTLEVHCSKGTYIRTLVDDLGEELGCGAHVTMLRRTAVADYPIEKMMSYAD
                     LQNLAENQPLAELDQHLLPMDTAVSALAKINLSSEQTKAVGFGQRIRFDNLNQLYGLV
                     RLYSEDEQFLGVAEITNDTVIRPNRMINLTE"
     gene            11445..12525
                     /locus_tag="PXD18_000722"
                     /pseudo
     CDS             11445..12525
                     /locus_tag="PXD18_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252783.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
     gene            complement(12563..13087)
                     /gene="tadA"
                     /locus_tag="PXD18_000723"
     CDS             complement(12563..13087)
                     /gene="tadA"
                     /locus_tag="PXD18_000723"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HDL6301177.1"
                     /translation="MFIKPNQTSCPLQISEQDIAFMQYALDLADLAEAKGEIPVGAVL
                     VDKNQQIIGRGWNQTIQLCDPSAHAEMQAIRQAGQTLGNYRLLDCTLYVTLEPCPMCA
                     GAILHSRIKRLVFGASDYKTGAVGSRYHLFEDYKMNHFLEVHGNVLGRECSQKISDFF
                     KQRRLQKKGDALIK"
     gene            complement(13169..14977)
                     /locus_tag="PXD18_000724"
     CDS             complement(13169..14977)
                     /locus_tag="PXD18_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDL6301178.1"
                     /translation="MTTESLTFADLGLPQPILDAVNEMGFVNPSPIQQECIPHLLAGR
                     DVLGMAQTGSGKTAAFSLPLLAQIDPTQRHPQMLVMAPTRELAIQVADACEQFAKNMK
                     GIRVVTVYGGQRYDIQLRALKQGSQVVVGTPGRILDHIRRGTLDLSELKFIVLDEADE
                     MLRMGFIDDVETVMAELPETHQTALFSATMPEPIRRITRRFMKDPQEVKIKATERSAP
                     DIEQSYWLVNGFRKNDALLRFLEVEEFDAAIIFTRTKTGTIDITELCERNGYRTAALN
                     GDMTQQAREQTLDKLRSGRLDILVATDVAARGIDIERISLVINYDIPLEEESYVHRIG
                     RTGRAGRSGRALLFVEPRERRLLRNIENLIKKPINEVAIPNHEILMEKRREKFKARIS
                     KQLEHHDLEKYRELLEDLFTADQDHEELAAAMMMLLQEKQKLILPPDPVVRAARSERG
                     RDRNERNDRRNGREHRENNGVAMDLYRIELGREDGVEVRHIVGAIANEGDISSRYIGH
                     IKLYDKYSTIELPQGMPNHLVQHFAHKARVLSKPMQMTLLGSANSASNANPFEGRGRR
                     GNDRNDRGGRRDGGFNKDRKGGFKEKRFSEKRGRRD"
     gene            complement(15179..16102)
                     /gene="nlpI"
                     /locus_tag="PXD18_000725"
     CDS             complement(15179..16102)
                     /gene="nlpI"
                     /locus_tag="PXD18_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpI"
                     /protein_id="HDL6301179.1"
                     /translation="MVQLFKLFRIRFLLLNLISVLMLSGCTSRYADLVSIKNLALAEL
                     NPQLRFEQEAMVVRLSQVLEEAPLTPSEQADLYFERGVIYDSLGLWSLARYDFAQAIS
                     LNQRMAAAYNYMGLYLLLEGDYDSSIDAFNAVLELDREYSYTYLNRGLAFYYSGRYSE
                     AQRDLLHFYEEDKKDPYRALWLYFNELEFTPTEAKNNLQKRANNLSSDYWGTNIVNYF
                     LGKLNLAQVRAIMERDAKENSSQYAEILTETYFYLAKQQLKLDHKDEAISLFRLALAN
                     QVFNFVEYRFALFELSQIRGMTQTTPVVDKE"
     gene            complement(16183..18333)
                     /gene="pnp"
                     /locus_tag="PXD18_000726"
     CDS             complement(16183..18333)
                     /gene="pnp"
                     /locus_tag="PXD18_000726"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HDL6301180.1"
                     /translation="MTPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVV
                     AKKDVKEGQDFFPLTVDYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPVRPLF
                     PEGFFNEIQVIATVVSVNPQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQF
                     VLNPTTSEQKISRLDLVVSGTDKAVLMVESEADILTEEQMLAAVVFGHEQQQVVIENI
                     KEFVKEAGKPRWDWVAPEPNTDLINKVKALAETRLGDAYRIVEKQVRYEQIDAIKAEV
                     IAQLTAEDETVSEGTIIDIITALESQIVRSRIIAGEPRIDGRTVDTVRALDICTSVLP
                     RTHGSALFTRGETQALAVTTLGTERDAQIIDELTGEKSDRFLFHYNFPPYSVGETGRI
                     GSPKRREIGHGRLAKRGVLAVMPTAEEFPYVVRVVSEITESNGSSSMASVCGASLALM
                     DAGVPIKAAVAGIAMGLVKEDEKFVVLSDILGDEDHLGDMDFKVAGTRTGVTALQMDI
                     KIEGITPEIMRIALNQAKGARMHILGVMEQAIPAPRADISDYAPRIHTMKIDPKKIKD
                     VIGKGGATIRALTEETNTSIDIDDDGTVKIAATDGNAAKAVMARIEEIVAEVEVNQIY
                     NGKVTRVVDFGAFVSILGGKEGLVHISQITNERVERVADYLTVGQEVQVKVVEIDRQG
                     RIRLTMKDINNTNEANAEETVAENVVETEQENNF"
     gene            complement(18595..19875)
                     /gene="phoR"
                     /locus_tag="PXD18_000727"
     CDS             complement(18595..19875)
                     /gene="phoR"
                     /locus_tag="PXD18_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HDL6301181.1"
                     /translation="MKVKLSLKHFLLELLLAAAVAGVFNLFFPAYFFWFSFCLLVLLI
                     WHHHTESSLLQLLRPNEQSGRSKVTTMEHLSQSAAFYHERLRQDKIKTLRLLSKLNKH
                     IQYLPDAIIICQENGEISWCNNVAQELFEFYWDKKSNKSIFNVIFYPEFKSYFRQQRH
                     HRPLVLLTHNKRYIELNLNRYDSNSRLIVARDVTSFVRLMHSRQTFLANMNHELRTPL
                     TILQGYLEMLENEPHNMALQQKALNAMKEQSQRMTNLLRQLSLLVKIEHSNDSEHNEV
                     QMSALISAIQKNTEILSQNQQILFDIEPNLTVWGDQEQLQSAVSNLIYNAIRHAGEGV
                     TIQICCQRDNQEPNTAIFSVQDDGIGIDAHHITHLTERFYRVDESRSNKTGGSGLGLA
                     IVKHALEQHHSTLEIESEAGKGSRFSFKLPLIKK"
     gene            complement(19878..20564)
                     /gene="phoB"
                     /locus_tag="PXD18_000728"
     CDS             complement(19878..20564)
                     /gene="phoB"
                     /locus_tag="PXD18_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006996031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HDL6301182.1"
                     /translation="MNNKILIVEDERAIREMLSLYLSKQYQVIEAEDYQSAINKLGEK
                     PELILLDWMMPGRSGIHLIKYLKKQPETEKIPIIMLTARSSEEDCITGLNAGADDYIT
                     KPFSPQVLLARIEAVWRRSYDPPSNLINIDGLILDQQAQRVLVAEQEVKLSGTEYKLL
                     HFLMTHPEKVYRREQLLDFIWGNDIYVEDRTVDSYIRRLRKSLEPYGFERYIQTVRGS
                     GYRFSNHFQD"
     gene            complement(20648..21418)
                     /gene="pstB"
                     /locus_tag="PXD18_000729"
     CDS             complement(20648..21418)
                     /gene="pstB"
                     /locus_tag="PXD18_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HDL6301183.1"
                     /translation="MLPTDLETKLHINNLNFYYGDFHALKNINMRIAKNKVTAFIGPS
                     GCGKSTLLRTLNRMFELYPNQRATGEINLDGENLLTSDTDISIIRAKVGMVFQKPTPF
                     PMSIYDNVAFGIRLFEKLPKSELNDRVEWALTKAALWNEVKHKLNQNGDSLSGGQQQR
                     LCIARGIAVKPEVLLLDEPCSALDPISTMKIEELINELKHDYTVAIVTHNMQQAARCS
                     DYTAYMYLGELIEFGDTKQIFDKPKFRQTEDYIKGKMG"
     gene            complement(21428..22276)
                     /gene="pstA"
                     /locus_tag="PXD18_000730"
     CDS             complement(21428..22276)
                     /gene="pstA"
                     /locus_tag="PXD18_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005650601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HDL6301184.1"
                     /translation="MKNYQNRRFYCRKIKNVLMLSLAYSAVLFGLFWLVWIIVTLLQK
                     GIPALSWELFTRPTPAPNETGGLRNAIVGSILIVSTATLIATPIGILAGTYLSEYGRY
                     TKLAKFTRFLNDVLLSAPSIIIGLFIYAIYVAQVKHYSGWAGSLALAVLVIPIVVRTT
                     DSMLNLVPNNLREAAAALGCPRWRVITMISYRAARSGIITGVLLAVARISGETAPLLF
                     TALSNQFASLDMNAPMANLPVVIYQYAASPFADWNTLAWAGAMLITLFVLSLNIITRL
                     YFSKTK"
     gene            complement(22273..23232)
                     /gene="pstC"
                     /locus_tag="PXD18_000731"
     CDS             complement(22273..23232)
                     /gene="pstC"
                     /locus_tag="PXD18_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HDL6301185.1"
                     /translation="MHKHKIDNKCLNHPWVEGLFHHTTRFFALLVFALLVVVLVSLLL
                     GSWEALSRFGVSFLWENEWNPVNDRYGALVPIIGTLISAGIALVIAVPVSFGIATFLT
                     ELAPQWLKRPVGTAVEMLAAIPSIIYGMWGLFVFVPLFQEYVQPYLIDTFGQLPFIGM
                     LFSGAPFGIGLFSAGLVLAIMIIPFIASIMRDVFSVVPPLLKESAYGLGSTTWEVIWK
                     VVLPYTKTGVIGAIMLGLGRALGETMAVTFVIGNAFMLPDSVFSPSTSIASAIANEFN
                     EAGGLQKSALMSLGLILFLITSIVLAASRLLIARMGKQEGKRE"
     gene            complement(23313..24350)
                     /gene="pstS"
                     /locus_tag="PXD18_000732"
     CDS             complement(23313..24350)
                     /gene="pstS"
                     /locus_tag="PXD18_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005756281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HDL6301186.1"
                     /translation="MAKRFKLLTVLGISFSLSVAANAQTITGAGASFPYPIYAKWAGL
                     YEKETGNKINYQSIGSGGGQQQIIAKTIDFGASDDPMKGETLAEHKLLQFPAIIGGTV
                     PVVNIPELKSGELKLSGKVLADIFLGKITQWNDPAIVALNQDIALPAKTILVVRRSDG
                     SGTTFGWTNYLSKVSAEWKEKVGEGKSVKWPVGQGGKGNEGVAAYVKQLKYSIGYVEY
                     AYAKQNALAWVSMQNADGKFVQPSRETFAAAAANADWSQTAGMGVILTNEAGEKAWPI
                     TAASFILIHQHSDKPEQTKGVFKFFDWAFKHGKDAAAELDYVPLPDNVVEKIQTQWKT
                     EVKDGQGNSLY"
     gene            24535..26781
                     /gene="parC"
                     /locus_tag="PXD18_000733"
     CDS             24535..26781
                     /gene="parC"
                     /locus_tag="PXD18_000733"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HDL6301187.1"
                     /translation="MTTEINYEGIEQMPIKRFTEDAYLNYSMYVIMDRALPFIGDGLK
                     PVQRRIIYAMSELGLNASAKYKKSARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRY
                     PLVDGQGNWGAPDDPKSFAAMRYTESKLSKIAEILLGELGQGTVDYQPNFDGSLEEPK
                     YLPARLPHILLNGTMGIAVGMATDIPPHNINELADASVMLLDNPKATLDDVLSVVQGP
                     DYPTEAEIITPKAEIARMYEQGRGSIKMRAVWKKEEGEIVISALPHQASPSKIIEQVA
                     TQMRNKKLPMVDDIRDESDHENPIRIVIVPRSNRIDFDALMDHLFATTDLEKSYRVNM
                     NMIGLDGKPAVKNLLTILNEWLSFRRTTVTRRLNYRLDKILNRLHILDGLMIAFLNID
                     EVIEIIRNEDEPKAELMARFNLTDVQAEAILNLRLRHLAKLEEHQLQAEKSELEKERD
                     ELQLILGSERRLNSLIKKEIQADAKAFASPRRSPLVERAESKAIAESDLTPTEDVTVI
                     LSEKGWVRCAKGHDIDVQALSHRAGDGYLAHARGRSNQPVVFLDSTGRAYALDPTSLP
                     SARSQGEPLTGKITLPEGAVVQQVLMASPETKVLMASDSGYGFICTFADLVSRNKAGK
                     AVISLTENAKVLPPQLLENDENLSLVAMSNVGRMLVFPVSELPQLSKGKGNKIINISA
                     AAAKSGDEYLARLLVIKPTNSLVFVSGKRKITLKPSDVDNYRGERARKGSQLVRGLST
                     NSTVEIVE"
     gene            complement(26852..28204)
                     /gene="lysC"
                     /locus_tag="PXD18_000734"
     CDS             complement(26852..28204)
                     /gene="lysC"
                     /locus_tag="PXD18_000734"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-sensitive aspartokinase 3"
                     /protein_id="HDL6301188.1"
                     /translation="MSHLSVAKFGGTSVANFDAMTSSANIVIADANTRVVVLSASAGV
                     TNYLVELANGCEKEHRDEVIAAVRQIQYNIIEKLQHQDAVKAEIDELLERIETLAESA
                     SLATSAALSDELISHGEMMSTKIFTQLLIERGHPAVWVDVRDVVATNSHYGKAAPNDE
                     KTQQQSDNVIKPLIASGKIVITQGFIGRDDEGKTTTLGRGGSDYSAALLAEVLNANDV
                     LIWTDVPGIYTTDPRVVPNAQRIDTMAFNEAAEMATFGAKVLHPATLLPAVRSNIPVY
                     VGSSKAPEQGGTWVTRDPQPRPTFRAIALRRNQILLTLSSLSMLHAQGFLANVFAILA
                     KHKISVDVITTSEVSVALTLDKTGSASSGADMLSAELLDELNAYCNVQVESDLALVAI
                     IGNNLHAQSGVAKKLFHTLENYNIRLISYGASSNNVCTLVKNAEADDVVRSLHKGLFE
                     "
BASE COUNT         8560 a         5587 c         6371 g         8063 t
ORIGIN      
        1 gaattaattg agagtttagc atctaaaaat ccaagtttac caattaaaat ggtggagcat
       61 tgtgtaaaag agcttttaga gcagttaacg gctactttag aagaaggtga aaggatagaa
      121 gtaagaggat ttggtagttt ttctctacat tatcggcagc cgcgtttagg tcgcaatccc
      181 aaaacaggag aaagtgttct tttaggcgcg aaatatgtac cacattttaa agctggtaaa
      241 gatctaaaag agagagttga tctgctttaa gtcttattaa ttcaataatc gtagtaagga
      301 gattatatga ttaagtatat tttaggtatt ttaattgtga ttgcagttat tattgtcgct
      361 gttacgattg gagccaataa tgatcaactt atcaccttta actatatttt tgctcagagt
      421 gaattacgct tatcaacgtt agttgcgatt ttatttggct taggattgat tcttggttgg
      481 ttggtaacgg gtatttttta cttaaaaatt aagtttcaaa acgttgcttt aaatcgtcgt
      541 gtaaagcgcc aagctcagca aataactgaa ttaacgactc caaaggctga ataatcaatg
      601 cttgaattat tgttcctttt attgcctatt gcagcactat atggttggta tatgggacaa
      661 cgtagtgcaa agaaggatca agaaaccgct agtaataagt tctctcgtga gtatgttacg
      721 gggttaaatt ttcttttatc taatcagcag gaaaaggcgg tggacctttt cctctctatg
      781 ttacaaaaac aagaatccga aaatcatatt gcatctgaat cccaatttga agcggagtta
      841 accctaggta atcttttccg ttcaagaggt gaggtagatc gtgccttacg tattcaccaa
      901 acattagtga atagccctca ttattcattt gatcaaaaat tattagcaaa acagcaatta
      961 gctaaagact ttatggttgc aggtttctat gaccgtgcag aaaattatta catttcatta
     1021 gttgatgaac ctgagtttgc taaatattct ttatctcagc ttgctgttat ttaccaaaaa
     1081 accagagaat ggaaaaaagc gattaatgtt acagaaaaac ggcttcgaat agagccggat
     1141 gcagataaaa taccgctttc acatttttat tgtgaatatg cgcaaggggt taaatttgat
     1201 gataaagcgg catttattga atcgttaaat aaagcgttag aatattatcc tcaatccaca
     1261 cgcgcttcta taatattagg tgatttctat ttagaagagg gagaatatct aagagcatta
     1321 agctatttcg aacagattct tgtgcaagac cctgattata ttagcgaagt gcttggacga
     1381 attaagcaaa gctatatggc tcttgaggac ttaaatggct atgagttatt tctcattcga
     1441 gcaaaccgag taaaacataa tagtagtgta gatattgctt taactgaatt tattgaagaa
     1501 aaagatggta tcaatgctgc acattctaaa ctataccagc agttgagtac ttatccgaat
     1561 ttaattactt ttcaccgctt tattcgctat caagcagatt ttgcggagga aggaaatggt
     1621 aaggaaagct tagttttatt acataatatg gtgggaaatc agataaaacg cagcttccaa
     1681 tatcgctgtt taaattgtgg ttatcaaagt tatcgcttaa tgtggcaatg tccttcttgt
     1741 aatcaatggg aaaaaattaa gccggtacaa agtatcgaag gtattattca ataaagaaag
     1801 aatctgagga attgaaaatg aacaataaag taattgttgc gttagactat gaaactgaac
     1861 gtgaagcatt agaatttgtg gatttggtcg atccgtcgct ttgtcgttta aaagtaggca
     1921 aagaaatgtt tacaacctta ggcacaaatt ttgtcaaaca attacacgaa cgtaaatttg
     1981 atgtattcct tgatttaaaa tatcatgata ttccaaatac ggttgctcga gcagtacgtt
     2041 ctgctgctga tcttggtgtg tggatggttg acttgcatgc ttctggtggt ttagccatga
     2101 tggaagaggc aaagaaaatt ttggagcctt atggcaaaga ggcaccatta ttaattgcag
     2161 tgacggttct aaccagtatg gaagatttgg atttgcttca aataggtatt aatgcttcgc
     2221 cgatggaaca agttattcgt ttagcacatt tagcacaacg ggctggttta gatggcgtgg
     2281 tatgttctcc acaagaagtt gaggtattac gtacccattg tggtcaagat tttaaattag
     2341 tgaccccagg aatccggcca aaaggaacag attttgggga tcaacgccga gtgatgacac
     2401 ccaaacaagc agtagaaaca ggctcagatt ttttggttat tggtcgtcct attacccaag
     2461 ctcaagatcc gcttgcggta ttaaaatcta ttaaccaatc tatcagttaa ttcattgcat
     2521 ttttaatgaa ggcggaaaaa tttccgcctt ttttaatcaa acaagcggtt atttttgagg
     2581 aaaaatttgt aaatgacatt agtctattca acggaaacag gcagaataaa gtccgaagta
     2641 ataaaagaag aacgccctaa aggggatggt attgtgcgta ttcaacgtca aacaagcggt
     2701 agaaagggga aaggtgtttg ccttatcacc ggtcttgatt tagaggataa agccttaaat
     2761 tctcttgctt cagagcttaa acgtaaattg ggttgtggtg gctcatttaa agatggagta
     2821 attgaaatcc agggcgataa tcgaggattc attaagcaaa tcttagaaca gaaaggtttc
     2881 aaagtgaaac tggcaggtgg ttgagtttta aacaattatc agctggcagt ttttaaataa
     2941 cttcatttta tttgaaactt cattcctact tttctgccta aaactcacga ttaaggagaa
     3001 aaactaatgt ggaagaaaac gttgattgct gtatttttag caagccaata tgcttttgcg
     3061 gtaggaaccg ggaaagaacc atcaaaaagt tatactgaaa cagaattaaa acaattaaaa
     3121 aatgattggt tagcgattta tcaaaaagag ctacagtatg cagaaaattt gcgtttaaaa
     3181 cagagagaaa attttcagca aattaattat ttggcagatg cagcgattag tcagaagaat
     3241 ttatcacttt caacggagca gataattcag cgtttattac taaccttagc gggttatccg
     3301 ttggagatga aagctgaatg gaagctgcta aatgctaaaa taacgttaaa acaagccaca
     3361 gaaagtgaag ttaaagcatt tatttcaaaa tatcctgatt ctttgtatca aaggcagtta
     3421 cagaacttga tgtttgagct gctctatcgt gaacagaaat ttccggagtt actggaatat
     3481 gctcaaaatg taaaacagag tagtcttgcc gaccaatgcc gtttattttc tgctcgttat
     3541 gaactggcag caagtaaagc tcaaatcaat ccggaagttt ctcaagtaac tgagcaaaaa
     3601 gcagaaaatg cagaactgct tgctttggtg caagagtttg atcgcttttg gcttgctacg
     3661 ccgaaattaa cttctgattg tgcgaattta gaaagttatt ggcgggatca ggggcttaaa
     3721 accgatgaaa aaatgcgttt gaaagcggtc gaattaatta aacaaaatgc aaatgcagaa
     3781 ttggcgaatt tggcggcaaa tgtaaataat gagaatttga aaatctggct atcttccgtt
     3841 gaaaaggtag cgaataatcc ggcagatttg caaaatttta tcgaaaatca accgcttgat
     3901 tccccatttt atgctgataa taaagcgatt attcagcaac tctttgctaa atatgtgcga
     3961 actttatcgg aaaatatgga gaacccgagt ttccagcagt atcaaacgtg ggcagagaag
     4021 tatcaacttt ccagcgagga aatcaatggc tggaaaaatg cttttatcac tcgatttttt
     4081 gataacccag aaccaacatt ccaattttgg cgtgatgagc aaatcaagtt gctcaagaca
     4141 gacaatttaa ctgaacgccg tttacgaatg gcaatttggc aaaaagcaga tttaaatgag
     4201 tggctggttc tgctatctca gcaggcgaaa gaaaaagcag aatggcgtta ttgggctgcg
     4261 aaagaggaga aaaacgaagc gaagcgtaaa gttgattttg aaagcttagc taaagagaga
     4321 ggcttttatg ctatgttggc tgctcaacaa ttaggcattg tttaccaaat cccgatgctt
     4381 gaagtgcctg aattgacaca agcacagctt gaattgtatg caaaccaatt agctcgtatt
     4441 caagagttgc gagagctagg gcagtttgac caggcaagaa aaatatggat tgactggata
     4501 aaaaacatca agccggaagc aggtgaaaat acaccaacta aaatccagtt agccctgata
     4561 aaatatgcca aggataaaaa ttggtatgat ttggcggtgg aaggtacaat tcaaacaaaa
     4621 gcctttgatt atcttgattt gcgattaccg aatgcctatt cggattggtt cgatttacat
     4681 ctgcaagata aaaaaatcag caaaacgttt gctcaggcga ttgctcgtca agaaagtgcg
     4741 tggaatgctc aggctcaatc gcacgctaat gcgagagggc taatgcaact gttaccgaca
     4801 acagcacaaa aaaccgctaa agataacggt ttaaccttca aagatggcaa tgatctcttt
     4861 caaccgttta acaatattat gttaggcaca acccatttaa tggagttaaa cgaaaaatat
     4921 ccgaataatc ggattctgat tgcctctgct tataatgcag gagcagggcg tgttgagcag
     4981 tggctgaaac gtagtaacgg gcagttagca atggatgaat ttattgccag tatcccgttt
     5041 tatgaaacca gaggctatgt acaaaatgtg ctggcgtatg actactatta tcaaatgctc
     5101 tatagcgata taaatgataa aaatggatta aaaatgttct atcaagagga attaacaaga
     5161 aaatattaaa aaatgcttgt gtttttgtgt agaaccgcta taatgcaccc catcagacgc
     5221 ggggtggagc agcttggtag ctcgtcgggc tcataacccg aaggtcgttg gttcaaatcc
     5281 ggcccccgca accagtttta agctcacagc tttggttaaa gttgtgagtt ttgttttata
     5341 tgctgtagca aatttgcaaa aaatttggca aaaaagaccg cttgttgtgg ttgctacagc
     5401 aaaaaacaaa ccgcttaaag ccccacggtt tcccgtctgg ggcttttttg cggaaattgg
     5461 tacagcatta acgtatcaaa gctggtttat ccggcttttt ttatatttgg agattatgac
     5521 ttggcaactt tagaacaaaa attagaagat ttagtgctcg attctattga agcattaggc
     5581 tttgaattag tcggcattga atgccaacgt gcaggccgtt ttttaacggt gcgtttatat
     5641 attgataaag aaggtggcgt gacgattgat gattgtagcg atgtcagccg ccaagtgagt
     5701 gcgatttttg atgtggaaga tccgattgcc gataaatata acttagaggt ttcttcacca
     5761 gggttagatc gtccattatt taccgttgcc cactatgagc gttttatcgg gcaagatgta
     5821 gtgattcatt tacgcattcc gatgttcgat cgccgtaaat ggcaaggtaa aatcaaacaa
     5881 gtagaaggtg atttcatcac tttaacggta gaaaatgaag atcgccagtt cgcatttggc
     5941 aatattcaaa aagcaaattt agttccggtt tttaattttt aagataaagg taaactgaca
     6001 aaatgagtaa agagatttta ttagctgcgg aagcagtttc aaacgaaaag caattaccaa
     6061 aagaggcaat ttttgaagcc ttagaaaccg ctttaaccat tgcaaccaaa aagagccgtg
     6121 atttagatat tgacgtgcgt gtggtggtag atcgtaaaac cggtgatttc caaactttcc
     6181 gtcgttgggc tgtggttgaa aatgtgaata atatgacccg tgaaatcagc ttagaagcgg
     6241 cacaatttga agatccaaac gtacaattag gcgattttat tgaagatgaa gtagagtcta
     6301 tcgagttcgg tcgtgtggcg attcagactt ttggtcaggt agtcaaaacc aaaattcgtg
     6361 aagcggagaa gacgaaaatc attgatgaat tccgttcgga tttaggcaaa attattcttg
     6421 ccactgtgaa aaaagtaacc cgtgataata ttttccttga gttacaaggt aaatcagaag
     6481 atatcaaagg cgaagcggtc attgtgcgtg aagatatgat cccacgtgaa aacttccgcc
     6541 cgggtgaccg tgtgcgtggt gtgttatacg aaatcaagcc tgaatcaaaa ggacctcagc
     6601 ttttcgttac ccgtgctaaa ccggtgatgt tagaagagct attcaaattg gaagtgcctg
     6661 aaattggcga aggcgtaatt gagatcaaag gttcagcccg tgatgtcggc tctcgtgcaa
     6721 aaattgccgt gaaaacccac gataaacgta ttgacccggt aggggcttgt gtgggtatgc
     6781 gtggtgctcg tgttcaagct atcagcaatg aattaggcgg cgagcgtgtg gatatcgtac
     6841 tttgggacga aaatccggct caatttgtga ttaatgcaat ggctccggca gatgtaagct
     6901 ctattgtgat taacgatgaa actcactcaa tggatattgc ggttgaagcg aaaaatctgg
     6961 ctcaagctat cggtcgtaac ggtcaaaacg tgcgtttggc gacacaatta actggttggg
     7021 cattaaatgt aatgaccgtt gaagagctaa cgaagaagag cgaagaagaa gatggtaaag
     7081 tcatcaattt attaacttct gctttagaaa ttgatgaaga atttgctcaa gttttaattg
     7141 aagagggctt tacgtctctt gaagcgattg cttatgtgcc ggttgatact ttaacggcga
     7201 ttgacggttt agaagatgaa gatttagtcg aagaattaca atctcgtgcc aaaaatgcga
     7261 tcacgaaaaa agcgttagaa gaagagaagt tattaaaatc agctcaaatt gaagaaaaat
     7321 tattaacgct tgaaggtatg gatcgccata tcgcattcaa attagctgaa aaacagatta
     7381 cgactcttga agaacttgca gagcaaggtg ttgatgattt agccgatatt gaagaacttt
     7441 cagaagagaa agctggcgag ctaattatgg cagcacgcca aatttgttgg ttcaactaag
     7501 caaagaggat aataaaatga cagaagagaa aaaaacactt tcgcttggtg gcgctcgcaa
     7561 agcgagtaaa gtgaatacaa ccacaaccag tggtaaagta aaagcggttg aagtaaaaga
     7621 gaaaaaaccg aaaattgatg caaaagcatt gcaagaaaaa gcagcaaaag aagctgccgc
     7681 agcgaaagct agagctgaaa aagaagcagc tgaaaagtta gccaaagaaa aagccgaagc
     7741 tgaagctaaa gagaaagctg caaaaaaagc agcagaatcg accgctagta aaccgatttc
     7801 tgtgccggta atgccaagca gcaaagcaaa agaagaaaaa ccgaaagcac aacaggtaca
     7861 gccaaaacaa gagaaagcgg ttgatcctga aaaagaagct aaacgcaaag aagaagctga
     7921 gttacgccgt aagcaagagg aattagctca gcaaaaagcg gaaatggagg caaaacgtgc
     7981 tgcagaaaat gcccgccgtt tagcagaaat tgctcgtgaa gaagcggaag ataacggcaa
     8041 cgaagatttt gatgatgagc gttttacttc ttcttatgct agagaggctg agcgtgataa
     8101 tgaccgccgt agtgagggaa atcgtggtcg taacggcaaa ggcaatgtgg ctaaagcgaa
     8161 aaaaggcgga cgtgaagagg ataaaaacga acgcagtgca gatcgtcgca accataaaga
     8221 agtaaaaggc aaaggtaaac aaggtaagaa aggtgcagct ttacaacaag cctttaccaa
     8281 accagctcaa gttgttaaag ctgatgtggt gattggtgaa actatcactg tggctgaatt
     8341 ggctaataaa atggcagtga aagcgactga aatcatcaaa atgatgatga aaatgggtga
     8401 aatggtgacg atcaaccaag ttatcgacca agaaaccgca caattagtgg cggaagaact
     8461 tgggcataaa gtgattttgc gtaaagaaaa tgagttagaa gaagcggttt tagaagatcg
     8521 tgatactcac gcagaaaaag taacccgtgc accggtagtg actattatgg gccacgttga
     8581 ccacggtaaa acctcgttac ttgactacat tcgtaaagcc aaagtggcgg caggtgaagc
     8641 aggtggtatt acccagcaca ttggtgcata ccacgttgaa accgatgacg gcaagatgat
     8701 cactttctta gataccccgg ggcatgcagc ctttacctca atgcgtgcgc gtggtgcgaa
     8761 agcaactgac atcgttgttc tcgtcgttgc ggctgatgac ggtgtaatgc cacaaactat
     8821 tgaagctatc cagcacgcca aagcagcggg tgcgccatta gtggtagcgg tgaataaaat
     8881 tgataaaccg gaagcgaacc ctgaccgtgt agaacaagag ttactacaac acgaggttat
     8941 ttctgagaaa ttcggtggcg atgtgcaatt cgtgccggta tctgcgaaaa aaggtatggg
     9001 gatcgatgat ttactagaag ccattattct gcaatccgaa gtgcttgaat taaccgcagt
     9061 aaaagacggt atggcaagcg gcgtggtaat cgaatcttac ttagataaag gtcgtggccc
     9121 tgtggcaact atcttggttc aatccggtac gctaaacaaa ggcgacattg ttctatgtgg
     9181 ttttgaatac ggacgtgtgc gtgcaatgcg tgatgaaaac ggtaaagatg ttgaatcagc
     9241 aggtccgtct attccggtag aagtattagg cttatcaggc gtgcctgctg ccggtgatga
     9301 ggcaaccgtc gtgcgtgatg agaagaaagc ccgagaagtg gctctttatc gccaaggtaa
     9361 attccgtgaa gtaaaactgg ctcgtcagca aaaagctaaa ctggaaaata tgttcagtaa
     9421 tatggcagcc ggtgatgtgg cagaattgaa catcattgtt aaagcagacg tacaaggctc
     9481 ggtagaagcg atcagccaat ccttaatgga actttcaacc gatgaggtga aagtgaaaat
     9541 tgttggttca ggtgtaggtg gtattaccga aactgatgca accttagccg cagcttctaa
     9601 tgctattatg gtcggcttta acgtgcgtgc cgatgcctct gcccgccgtg tgattgaaaa
     9661 cgaaaatatc gatttacgtt actactccat catttatgag ctattaaatg acgtgaaagc
     9721 agcaatgagc ggtatgttac agcctgaatt caaacaagaa attatcggct tggcagaagt
     9781 gcgcgatgtg ttccgccacc cgaaatttgg ggcgattgcc ggttgtatgg tgacagaagg
     9841 tatcgttaaa cgtaacaacc caatccgtgt tctgcgtgat aacgtagtaa tttttgaagg
     9901 cgagttagaa tctctccgcc gtttcaaaga tgacgtatct gaggtgcgta acggtatgga
     9961 atgtggtatc ggcgttaaaa actacaacga cgtaaaagtt ggcgaccaaa tcgaagtgtt
    10021 tgaagtggtt gaagtaaaac gtactattta gcctaatttt gtgtaggggc gtattgcata
    10081 cgccctttgt attttttagg gcgtgaagca tcacgcccct ataaaagaga aaaatatgtc
    10141 cagagaattt aaacgtagtg accgtgtggc acaggagcta caaaaagaag tggcggtgat
    10201 tttacaacgt gaggtaaaag atcctcgcat tggtatggtg actgtttctg atgtggaagt
    10261 atcaagagat ttggcgtatg ccaaaatttt tgtgactttc ttatttgata acgatgctga
    10321 agctattaag caaggtatgc aaggcttgga gaaagcaagc ccctatattc gaaccctttt
    10381 aggtaaagca atgcgtttgc gtattgtgcc tgaactgcgt tttatctacg atgaatcgct
    10441 agtcgaaggt atgcgtatgt ctaaccttgt gtctagtgta atcaaaaatg acgaagaaaa
    10501 acataaagag gactaattgt gtctagacct cgcaaacgtg gccgtgatat tcacggcgtt
    10561 ttcttattag ataaaccaca aggaatgtct tcaaacgata ttctgcaaaa ggtaaagcga
    10621 attttccaag caaataaagc cggacatacc ggggcgttag accctctcgc aaccggaatg
    10681 ctgccgatct gtttaggtga agcgaccaaa ttttcgcaat ttttgttgga ttcggataaa
    10741 cgttatctcg tcaccgcaaa attaggcgag cgaaccgata cttcagatgc ggaagggcaa
    10801 gtggtggaaa ccaaagcagt tgcagtgaca aaatctcaaa ttttggctgc tttggagaaa
    10861 tttagaggtg atattttgca agtgccgaca atgttttcgg ccttaaaaca caacggcaaa
    10921 cccttgtatg aatatgcccg agcagggatt acggtggagc gtgaggctcg cccgattacg
    10981 atttttgaac taaatttcat tgaatacaag gctccatttt taacccttga ggtgcattgt
    11041 tctaaaggta cttatatccg aactttggtc gatgatttag gcgaagagtt gggctgtggt
    11101 gcacacgtta cgatgctacg ccgtacagca gtggcagatt atccgattga aaaaatgatg
    11161 agctatgcag atttgcaaaa tttagccgaa aatcaaccgc ttgcagagtt agaccagcac
    11221 ttattgccga tggatacggc agtttctgca ttagcaaaaa taaatttaag ttcagagcaa
    11281 actaaagcgg tgggttttgg tcagagaatt agatttgata atctgaacca actttatggt
    11341 ttggtacgtt tatattcaga agatgaacaa tttctcggtg tggcagaaat caccaatgat
    11401 actgtgattc gtcctaaccg aatgattaac ttaacggaat aagaatgaaa tcgataattt
    11461 ttaccttacc tttagcgatt atcactttag ccttagccgg ttgttcaagt gataatcaag
    11521 aaagttatgc cggcttaaac ttagatgcta aatacagtaa atctcgctcg gtcagtcatt
    11581 ttaatgatta tgtgcatttt ctgaaacaga aggcagcagg ggcaggagtg tctgcaaaaa
    11641 ccttaaatgc tcagaaattc attcattaca acgccagagc ggtgcagtta gatcaacagc
    11701 aagctgcacg aagacgtgac ccgaatgtac cgcctccgcc accaaatcca agttttaaac
    11761 aaagtattaa ctcaagcgaa ggtggatcag gcaagtgaac gttggtatga atataatagc
    11821 cagcttaccc atgccagcca aaaatatggg gtacaaaaag agtatatttt ggcactttgg
    11881 ggaatggaga gcagctttgg gcgtaaccaa ggggattttg atgtactttc ggtgttggca
    11941 accctcgcct ttgatggtcg ccgtgagaag ttatttacgc aagaatttgt gaatgcgatg
    12001 aaaatgctcg atgacggcac aattaaacgc tatgaattgc ttggatcttg ggcaggagcg
    12061 atgggacaaa ctcaatttat gccaacttct tacttaacct atgcagctga tggcaataat
    12121 gacggtaaaa aagatatttg ggagaatgaa gccgatgcat ttgcctcgat tgccaattat
    12181 ctttcaacag taggttggga taatcaacta ccttggggtg ttgaggttaa attagcttca
    12241 ccgatggatt taagtttcgc cggtcttgaa accaacaaag cgaaaacatt ggcggaatgg
    12301 caagccttag gtatttattt agcttatccg aatggacaag aatcggcaaa attagctcaa
    12361 ttacacggca aagaggtttg gttgattcgt ccggataaag aagcgggaag agcgttttta
    12421 gtttctaata atttccgtac tttaatggat tggaataaat cgaataacct tggtatcagt
    12481 atcggaaaat ttgccgatcg aattttagct tcagttggtc aataatcgaa taaaagcata
    12541 gtagcaaagc ctatctatgc ttttatttta tcaaagcgtc gcctttcttc tgcaaacgac
    12601 gttgcttaaa aaaatcactg atcttttggc tacattctct gcccaataca ttgccatgca
    12661 cttctaagaa atggttcatt ttataatctt caaacagatg atagcgtgaa cctaccgcac
    12721 ctgttttata atcacttgcc ccaaaaacca atcgcttaat ccgactatgt aaaattgcac
    12781 cggcacacat tgggcaaggc tcgagcgtaa cataaagggt acaatctaac agacggtaat
    12841 tccctaaagt ttgtcctgct tgacgaattg cctgcatttc agcgtgtgca gatggatcac
    12901 agagttgaat ggtttggttc cagcctctgc cgataatctg ttggttttta tcaaccagta
    12961 ctgccccaac cgggatttcg ccttttgctt cggctaaatc agcgagatca agggcgtatt
    13021 gcataaaggc gatgtcttgc tcggagatct gaagtggaca agaagtttga tttggtttga
    13081 taaacatagt tgcaaaaaat tgagtttttt tgaccgcttg taaaatgccc cacgagggtg
    13141 gggcatcgct tacttcgctt agtgtcgttt agtcacgacg accacgtttt tcactgaaac
    13201 gtttttcttt aaagccacct ttgcggtctt tattgaaacc cccgtctcgg cgaccaccac
    13261 gatcattacg atcgttacca cggcgaccac gaccttcaaa tggatttgca ttacttgcac
    13321 tgtttgcaga gccaagtaat gtcatctgca ttggtttgct taatacacgt gctttgtgag
    13381 cgaaatgttg tacgagatga tttggcattc cttgcggcaa ctcaatggtt gagtatttat
    13441 cataaagttt gatatgcccg atgtaacggc tgctgatatc cccctcgttg gcaatcgctc
    13501 caacaatatg acgaacttcc acaccgtctt cacgccccaa ttcaatgcgg tataaatcca
    13561 ttgccacacc attgttttca cggtgttcac gaccgttacg acgatcgttt cgctcattgc
    13621 ggtcacgtcc acgttcagaa cgggcagcac gcacaaccgg atccggtggc agaatcagtt
    13681 tttgtttttc ttgcagtaac atcatcatcg ccgctgctaa ttcttcgtgg tcttgatccg
    13741 cagtaaataa atcttccaac aattcacgat atttttctaa atcgtgatgt tctaactgct
    13801 tagaaatgcg ggctttgaat ttctcacggc gtttttccat taaaatttcg tggtttggaa
    13861 tcgccacttc attaattggt tttttgatta aattttcgat attgcgtaat aagcggcgtt
    13921 cacgaggctc aacaaacagt aaggcacgac ctgaacgacc ggcacgaccg gtacgtccga
    13981 tgcggtgaac ataagattct tcttctaacg gaatatcgta gttaataacc aagctgattc
    14041 gctcaatatc aataccacgg gcagcaacat cggtggcgac taaaatatct aaacgaccgg
    14101 agcgtaattt atctaaggtt tgctcacggg cttgctgggt catatcgccg tttaatgccg
    14161 cagtacggta gccgttgcgt tcacacaatt cggtaatatc aatagtaccg gttttggtgc
    14221 gggtaaagat gatagcagca tcaaattctt ctacttctag gaaacgcaat aacgcatcgt
    14281 ttttacggaa gccgtttacc agccagtagc tttgttcaat atccggggct gaacgctcgg
    14341 ttgccttaat ttttacctct tgcggatctt tcataaaacg acgggtaata cggcgaatcg
    14401 gctccggcat ggtggcagag aagagagcag tttgatgtgt ttccggtaat tcagccatta
    14461 ccgtttcaac atcgtcaata aagcccatac gcagcatttc atcggcttca tctaacacga
    14521 tgaattttaa ttcggataaa tctaatgtgc cacggcggat atggtcaaga atacgcccag
    14581 gtgtacccac tactacttgt gagccttgtt ttaaagcacg taattgaatg tcgtaacgtt
    14641 gtccaccata aaccgtcact acacgaatgc ctttcatatt ttttgcaaac tgctcacaag
    14701 catcggctac ttgaatcgca agctcacggg tgggtgccat caccaacatt tgcgggtggc
    14761 gttgtgttgg gtcaatttgt gccaacagcg gcagcgagaa tgcggcggtt ttaccgctcc
    14821 cggtttgtgc cataccaagc acatcacgac cggctaataa atgaggaata cattcttgtt
    14881 gaatgggtga tgggtttaca aagcccattt catttacagc atcaaggatt ggttgaggta
    14941 agcctaaatc ggcgaaagtt aaagattcag ttgtcataaa aaaccatttg tttggaacgc
    15001 acaaagcaga aaatatcgac tatttttctg cacagccatt aatgaaaatt atattgttga
    15061 aatttaggaa gaaatgaaat aacaaagcaa gtgatgcttt aaaaatcccc tgagtataag
    15121 cggttaaatt tacaaaattt tttgcgaaat taaccgcttg tattgtccta atctttccct
    15181 attctttatc aacaacggga gtcgtttgag tcataccacg aatttgtgat aactcaaaca
    15241 gggcaaaacg atactcaacg aagttaaaca cttgatttgc aagagcaaga cgaaagaggc
    15301 tgattgcctc atctttatga tctaatttga gttgttgttt tgctaagtag aaatacgttt
    15361 ctgtcagtat ttctgcatat tgtgagctat tttccttagc gtcacgttcc attatagcac
    15421 gaacttgagc taaattgagc ttccctaaaa aataatttac gatatttgtt ccccagtaat
    15481 ccgaagaaag attattagct cgcttttgta aattattttt agcttctgtt ggtgtaaatt
    15541 ccagctcatt aaaatagagc cataatgctc gataaggatc tttcttatct tcttcataaa
    15601 aatggagaag atcacgctgg gcttcagaat atctgccgct ataatagaaa gccaaacctc
    15661 gattgagata ggtgtagcta tattcccgat ctaattccaa tacggcatta aacgcatcaa
    15721 tcgaactgtc gtaatcgcct tccagcagca gatacagccc catatagtta taagctgccg
    15781 ccatacgttg attgagcgaa atggcttgag caaaatcata acgggctaac gaccataaac
    15841 ctaaactgtc gtaaataacg cctctttcaa aatagaggtc tgcttgctca gagggcgtta
    15901 atggggcttc ttccaatact tggctgagtc ttaccaccat tgcctcttgt tcaaagcgaa
    15961 gttgaggatt aagttctgcc aatgctaagt ttttaattga aaccaaatcg gcataccgac
    16021 tggtacagcc gcttagcatt aaaacagaaa ttaaattcag taataagaaa cggattcgaa
    16081 acaacttaaa aagttgtacc attacagcat atccctcaat taaggaaaat taaaaactga
    16141 ataacggaca ctcaaagtcc gttattcgcc tttattattg aactagaaat tattttcttg
    16201 ttctgtttct accacatttt cagctacagt ttcttctgca tttgcctcgt tggtattatt
    16261 gatgtctttc atcgtcagac gaatgcgtcc ttgacggtca atttctacca ctttcacttg
    16321 tacttcttga ccaacggtta agtagtccgc tacacgctca acacgttcgt tggtgatttg
    16381 tgaaatgtgg actaaacctt ctttgccacc taagatggaa acgaatgcac cgaagtccac
    16441 cacacgggtt actttaccgt tgtagatttg gtttacttcc acttcggcaa cgatctcttc
    16501 aatacgagcc attactgctt tcgctgcatt gccgtcagtt gccgcaattt tcaccgtacc
    16561 gtcatcatca atgtcgatag aagtattggt ctcttcggtt aaagcacgaa ttgttgcacc
    16621 gcctttacca atcacatctt tgattttctt cggatcgatc ttcattgtgt gaatgcgtgg
    16681 ggcatagtca gaaatatctg cacgaggtgc cggaatggct tgttccatta cacctaaaat
    16741 gtgcattctt gcacctttag cttggtttaa ggcaatacgc ataatttcag gggtgatccc
    16801 ttcgattttg atgtccattt gcagcgcagt cacaccggta cgggttcccg ctactttaaa
    16861 gtccatatcg cctaagtggt cttcatcacc taagatgtca gaaagtacca cgaatttctc
    16921 gtcttctttc acgagcccca ttgcgatacc ggcaaccgct gctttgattg gcacacctgc
    16981 gtccatcaac gcaagagacg caccacacac agatgccatt gaagaagaac cgttagattc
    17041 agtgatttca gacaccacac gcactacata cgggaactct tcagcggttg gcatcacggc
    17101 taatacgcca cgttttgcta aacgaccgtg accgatttca cggcgttttg gcgagccgat
    17161 acgaccggtt tcgcccacag agtatggagg gaaattgtag tggaataaga aacggtcaga
    17221 tttttcgccg gtcaattcgt caatgatttg ggcatcacgc tctgtgccca atgttgttac
    17281 tgctaatgct tgggtttcgc cacgggtgaa aagagcagaa ccgtgggtgc gtggtaacac
    17341 actggtgcaa atatccaatg cacgcacggt atccaccgta cggccgtcaa tgcgtggttc
    17401 gcctgcaata atacggctac gcacgatttg gctctctaat gcggtgatga tgtcgatgat
    17461 agtcccttca gaaacagttt catcttctgc ggtaagttgt gcaatcacct ctgctttaat
    17521 cgcatcgatt tgctcgtaac gaacttgttt ttctacgata cgataagcat cgccaaggcg
    17581 tgtttctgct aatgctttta ctttgttgat taaatctgta tttggctctg gtgcaaccca
    17641 atcccaacgt ggtttgcccg cttctttaac aaattctttg atgttttcga ttacaacctg
    17701 ttgttgctcg tggccgaaca ccaccgccgc taacatttgc tcttcggtta agatatccgc
    17761 ttcagattcc accatcaaca cggctttgtc tgtacctgaa accactaaat ctaagcggct
    17821 gattttttgc tcgctggtgg ttgggtttaa tacgaattga tcgttgataa aaccgacacg
    17881 agccgcaccg attggaccgt taaacggcac gccggataat gaaagggcag ccgatgcacc
    17941 gatcatcgca accagatcag gactgatttg tgggtttacc gatactacgg tcgcaatcac
    18001 ttgaatttcg ttaaagaaac cttctgggaa aagtggacgc acaggacggt cgatcaagcg
    18061 agcgattaag gtttcacctt cgctaggacg tccttcacgt ttgaagaaac cgcccggaat
    18121 acgaccggct gcgtaagtac gctcttgata atctacggtt aatgggaaga aatcttgccc
    18181 ttcttttacg tcttttttcg ctactacggt aacaaatacg gttgtgtcgt ccatacttgc
    18241 cattactgct gccgttgctt ggcgtgcgat agcaccggtt tctaaggtca cggtgtgctg
    18301 accgtattta aactgtttta caattggagt cattgaaatt ttccttttaa agaatttact
    18361 attattgtcg ttttatttct ctaaattgcg actagcaaaa aggcttttaa gtaaaacatt
    18421 tttgatagcc gcctctcaat aacaagaaat aaaacttgtc tagtatagcg tgatttttat
    18481 aaaaaatcgc ctattatttt gatcttgcac ctcagttata aagaaattca aaacttcagt
    18541 gtaaaatggg gattagtttg tgaaaagcct tgtgaaaata gtttgattgc atcgctattt
    18601 ttttattaga ggtagtttaa aactaaatct gcttccttta ccggcttcac tttcaatttc
    18661 cagtgtggaa tggtgctgtt caagagcgtg tttgacaata gccagaccta aaccgctacc
    18721 gccggttttg ttgctacgag attcgtccac acgatagaaa cgttctgtca gatgggtaat
    18781 atgatgggca tcgataccaa taccgtcatc ttgcacgctg aaaatcgcag tattcggctc
    18841 ttgattatca cgttgacaac atatttgaat ggtaactcct tcaccggcgt gccgtattgc
    18901 attgtaaatt aaatttgata cagcgctttg gagttgctct tgatctcccc ataccgttaa
    18961 attaggctca atatcaaaca gtatttgctg attttggctt aaaatctcgg tatttttttg
    19021 tatggcggag attaacgccg acatctggac ctcattgtgt tcggaatcat tggaatgctc
    19081 gattttaacc aaaagtgaga gttggcgaag caggttagtc atacgttgac tttgctcttt
    19141 catcgcattg agcgcttttt gctgtaatgc catattatgc ggctcgtttt ccagcatttc
    19201 caaataacct tgtaatatgg taagaggtgt tcgcagttcg tggttcatat ttgccaaaaa
    19261 ggtttgtcgt gagtgcataa ggcggacaaa agaggttaca tctcgtgcga caataagtct
    19321 ggagttactg tcatatcgat tgagattcaa ttcaatatag cgtttattat gagtcagcag
    19381 taccaatggg cgatggtgtc gttgttggcg gaaatagctt ttaaattcag gataaaaaat
    19441 cacattaaaa atgcttttat ttgatttttt gtcccaataa aactcaaata gctcttgtgc
    19501 aacattattg caccaagaaa tctccccgtt ttcttggcaa ataatgatcg catcgggtaa
    19561 gtattgaata tgcttattta attttgataa cagacgtaag gttttgattt tatcttggcg
    19621 taaacgttcg tgatagaatg cggcactttg agataaatgc tccattgtcg ttacttttga
    19681 cctgccgctt tgctcattag gtctgagtaa ctgaaggaga gaagattcgg tgtggtgatg
    19741 ccaaataagt agaaccagta aacaaaaact aaaccagaaa aaataagcag ggaaaaacag
    19801 attgaatacg ccggcaacgg ctgctgccag caaaagttcc aataaaaagt gtttaagtga
    19861 gagcttaact ttcattatta gtcctgaaaa tggttggaaa aacggtatcc cgagccacgt
    19921 acggtttgaa tataacgctc aaaaccatag ggttcaagac tcttacgcaa tcgccgaata
    19981 taagagtcta ccgtgcgatc ctcaacataa atatcattac cccaaataaa atcaagcaac
    20041 tgttcacgac gatacacttt ttcagggtga gtcattaaaa agtgaagcag tttatattcc
    20101 gtgccgctta atttcacttc ctgttcggca accaaaaccc gttgtgcctg ttgatcaaga
    20161 atcaatccgt ctatattgat gagattgctt ggcggatcat agcttcgccg ccatactgct
    20221 tcaatccggg caagcaacac ctgtggtgaa aacggtttgg taatgtagtc gtctgcaccg
    20281 gcattcagac cggtaataca gtcttcttcg ctactgcggg ctgttagcat aatgattgga
    20341 attttttcgg tttcaggctg tttttttagg tatttaatta aatggatacc cgaacgcccc
    20401 ggcatcatcc aatccagtaa aataagctcg ggtttttcgc ccagtttatt gatagcactt
    20461 tggtagtctt ccgcttcaat tacctgatat tgtttgctga gatagagact tagcatttca
    20521 cgaatagcac gttcgtcttc aacgatcaga attttgttat tcattcttcc tctccgatgc
    20581 ggtgtgacaa gcggtcgatt tatcgcagaa atttgcaaat tttttactaa aaccgaccgc
    20641 ttgcagatta ccccatttta cctttaatgt aatcttccgt ctgccggaat tttggtttgt
    20701 cgaaaatttg tttggtatca ccgaattcaa tcagctcgcc tagatacata taagcggtat
    20761 agtcagaaca gcgggctgct tgctgcatat tgtgggtaac tatcgctacc gtgtagtcgt
    20821 gcttgagttc gttgataagt tcttcgattt tcatagtcga aatcgggtca agtgcggagc
    20881 agggctcatc cagcagtaac acctcgggtt tcactgcaat acctcgtgca atacagagcc
    20941 gttgctgttg cccgccggag agactgtcac cattttggtt taatttatgc tttacctcat
    21001 tccataaagc cgctttggtt aatgcccact ctacacgatc gtttagctcg gatttcggca
    21061 atttttcaaa cagacgaata ccaaaagcaa cattatcgta aatggacatc gggaatgggg
    21121 tcggtttttg gaaaaccata ccgactttgg ctcgaataat cgaaatatcc gtatcggagg
    21181 tgagtagatt ctctccatca agattgattt cccccgttgc acgttgattc gggtagagct
    21241 caaacattcg gtttagggtt cgcagtaatg ttgattttcc acaaccggaa ggaccgataa
    21301 atgcggtcac tttatttttg gcaatacgca tattgatatt tttcagagcg tggaaatcgc
    21361 cataataaaa attgaggttg ttaatatgta attttgtctc taaatccgtt ggtaacatat
    21421 agagtcctta ttttgttttg ctgaaataca gacgagtgat gatattaaga gaaagcacaa
    21481 acagagtaat aagcattgca cctgcccaag ccaatgtatt ccagtcagcg aacgggctgg
    21541 ctgcgtattg ataaatcacc acagggaggt ttgccattgg tgcattcata tctaaagagg
    21601 caaactggtt ggataatgcg gtaaacaata gcggtgcggt ttctccggaa atacgggcaa
    21661 cagcgagcaa cacgccggta ataatgccgg agcgggcggc acgataagag atcattgtaa
    21721 ttaccctcca tcgtgggcag ccgagagccg cagctgcttc acgcagatta ttaggcacaa
    21781 gattgagcat actgtcggta gttcgaacaa caatcggaat cactaatacc gccaatgcta
    21841 atgagcctgc ccagcctgaa tagtgtttaa cctgtgcgac ataaatcgca taaataaata
    21901 agccgataat aatagaagga gcagagagca acacatcatt caaaaaacgg gtgaattttg
    21961 ccaatttggt ataacgcccg tattcgctca agtaagtgcc ggctaaaata ccgattggtg
    22021 ttgcaatcag tgttgcggta ctgacaatca gtatagagcc gacaattgca ttacgtaatc
    22081 ctcctgtttc atttggtgca ggagtcgggc gggtaaacag ttcccaagac agtgcaggga
    22141 tacctttttg gagtaaagta acaataatcc agaccagcca aaataagcca aataatacag
    22201 cggaataggc aagacttaac atcaagacat tttttatttt tcggcaataa aagcgtcggt
    22261 tttggtaatt tttcattctc gttttccttc ctgtttaccc attcgtgcga ttaataaacg
    22321 tgaagcggct aaaacaatcg aagtaataag gaacagaatt agccctaggc tcatcaacgc
    22381 tgatttttgt aatccgccgg cttcattaaa ttcattggcg atagcagaag cgatggaggt
    22441 tgaaggggaa aataccgaat caggtagcat aaaggcatta ccgatcacaa aggtaactgc
    22501 cattgtttcg cctaatgctc gacctaaccc gagcataatt gcaccgatta ctccggtttt
    22561 ggtgtaaggt agcacgactt tccaaataac ttcccaagtg gttgagccta aaccgtaagc
    22621 agactctttc agtaaaggcg gtacaacact gaaaacatca cgcataattg aggcaataaa
    22681 gggaataatc ataatcgcca ataccaagcc ggcactgaat agcccgatcc cgaaaggagc
    22741 tccgctaaaa agcataccga taaagggaag ctgaccaaat gtatctatca aatacggttg
    22801 cacatattct tgaaataagg gtacaaatac aaacagcccc cacataccgt aaataataga
    22861 gggaatagcc gctagcattt ctaccgctgt gccgacaggg cgttttagcc attgcggtgc
    22921 aagttcggtt aagaaagtcg caatgccgaa cgagaccgga acggcaatga ctaatgcaat
    22981 gccggcagaa atcaatgtgc cgataatcgg cactaatgca ccgtatcggt cattcacagg
    23041 gttccactcg ttttcccata ggaatgatac cccgaatcgg cttaatgctt cccaactgcc
    23101 aagcaataat gaaaccagca ccaccaccaa caaggcaaaa accagcaaag caaagaaacg
    23161 ggttgtgtga tgaaataacc cctctaccca aggatggttt aagcatttgt tatcaatttt
    23221 atgtttatgc atagtgacaa ctcttttgca aaatgttgtg aaaaaacgac cgcttgttgt
    23281 tagttaagct ccatacaagc ggtcgttttg cattagtaga gcgaatttcc ttgtccatct
    23341 ttaacttccg ttttccattg agtttggatt ttctctacta cattatccgg tagaggcaca
    23401 taatccagtt cggcagccgc atctttaccg tgcttaaatg cccagtcgaa gaatttaaat
    23461 acccctttag tttgctctgg tttgtcgcta tgttgatgaa tcaagataaa actggcggcg
    23521 gtaatcggcc aggctttttc tcccgcttcg ttggttaaaa taacgcccat accggctgtt
    23581 tggctccaat cggcgttagc agcggcagca gcaaacgttt cacgggaagg ctgaacaaat
    23641 ttaccatctg cattttgcat agaaacccaa gccagagcat tttgtttagc ataggcatat
    23701 tctacgtaac caatagaata cttgagctgt ttcacataag ctgcgacacc ttcatttcct
    23761 tttccgcctt gtccgaccgg ccatttcacc gattttcctt cgccgacttt ctccttccat
    23821 tcggcagaga ctttagaaag atagtttgtc caaccgaaag ttgtgcctga accgtctgag
    23881 cggcgtacga ctaaaattgt ttttgccggc agggcgatat cttgattaag tgcgacaatt
    23941 gccggatcgt tccattgtgt aattttgcct aggaatatat cggcaagaac tttaccggac
    24001 agtttcagtt cgcccgattt aagttcagga atattgacaa ccggtacagt tcccccaatg
    24061 atggcgggaa attgcaaaag tttgtgttct gctaatgttt cgcctttcat cgggtcatca
    24121 gaagcaccga aatcaattgt tttggcaata atttgttgct gaccgccacc ggaaccgata
    24181 gattggtaat tgattttatt accggtctct ttttcatata aacctgccca tttggcgtag
    24241 ataggataag ggaaagaagc accggctcct gtgatggttt gagcatttgc tgcgacagaa
    24301 agtgaaaaag aaatgcctaa aacggtaagt agtttaaatc gtttggcaat catattgttc
    24361 tccttaaagt tagcgtgagt taatttcacg tgcttagtgt agaaaaagaa tatgacaaaa
    24421 tgatgacaat ggtaaaaaaa tcagaaaaaa cgaccgcttg tgtttcaggc tagactaaac
    24481 aggctaaatc gtagaaaata gccctcgttt ttttaatata aatatcgata aaaaatgacc
    24541 acagaaatca attatgaagg cattgaacag atgccgatta agcgttttac cgaagatgct
    24601 tacctcaatt attcgatgta tgtaattatg gaccgggcat tgccgtttat tggcgatggc
    24661 ttgaaaccgg tgcaacgccg tattatttat gcgatgtcgg aacttgggct aaacgcctcg
    24721 gcaaagtata aaaaatcagc ccgtaccgtg ggggatgtat taggtaaatt ccatccgcac
    24781 ggtgatagtg cctgctatga agcaatggtg ctaatggctc aaccgttctc ttaccgctat
    24841 ccgttagtgg acggacaagg caactggggg gctccggacg atccgaaatc cttcgctgca
    24901 atgcgttata ccgaatcgaa actgtctaaa attgcagaaa ttttattggg cgagttaggg
    24961 caaggaacgg tggattatca gccaaatttt gatggctcgt tggaagaacc gaaatatctg
    25021 ccggctcgtt taccgcatat tttgttgaat ggcacgatgg ggattgcggt gggaatggca
    25081 accgatattc caccacacaa tattaatgaa ttggctgatg ccagtgtgat gttgctggat
    25141 aacccgaaag caacgcttga tgatgtacta agcgtggtac aagggccgga ttacccgaca
    25201 gaggctgaaa tcatcacacc aaaagcggaa attgccagaa tgtatgagca ggggcgtggt
    25261 tctattaaaa tgcgtgcggt gtggaaaaaa gaagagggtg aaattgtgat ttcagccttg
    25321 ccgcaccaag cctctccttc aaaaattatt gagcaagtag caacccaaat gcggaataaa
    25381 aaactaccga tggtggacga tattcgtgat gaatctgacc acgagaaccc gattcgcatt
    25441 gtgattgtgc cacgctctaa tcgcattgat tttgatgcgt taatggatca cctgtttgcg
    25501 acgaccgatt tggagaaaag ctaccgagtc aatatgaata tgattggctt agacggcaag
    25561 ccggcagtga agaatttgct gactattctc aatgagtggc tgagttttag acgtaccact
    25621 gtcactcgcc gcctgaatta ccgattagat aaaattttaa accgcttgca tattttagac
    25681 ggtttgatga ttgcatttct caatattgat gaagtgattg agattattcg caatgaagat
    25741 gagccgaaag ccgagttaat ggctcgtttt aatctgaccg atgtgcaagc agaggcgatc
    25801 ctgaacttac gtttacgcca cttagccaaa ttggaagagc atcaattaca ggcggaaaaa
    25861 tccgaactgg aaaaagaacg tgatgaattg caactgattt taggctcgga acgccgtttg
    25921 aacagcctga tcaagaaaga gattcaagcc gatgccaaag catttgccag cccacgccgc
    25981 tcaccattgg ttgaacgagc ggagtctaaa gcgattgcgg aaagtgactt gactccaacc
    26041 gaagatgtga ctgtgatttt gtctgaaaaa ggctgggtac gttgtgcgaa aggacacgat
    26101 attgatgttc aagccctaag ccatcgagcc ggagatggtt atcttgccca cgcaaggggt
    26161 agaagtaatc agcctgtggt atttttagac agtacagggc gagcttatgc tctcgatcca
    26221 acttcactgc cttcggcacg ctcgcaaggc gaaccgctta caggcaaaat caccctaccg
    26281 gaaggtgcag tagtgcagca agtgctaatg gcaagtccag aaactaaagt gctaatggca
    26341 tccgattcag gttacggctt tatttgcacc tttgcagatt tagtttctcg taataaagcc
    26401 ggcaaagcgg ttatttcttt aaccgaaaat gcaaaagtac tgccgccgca attattggaa
    26461 aatgatgaaa atttatcgct tgtagcgatg agtaatgttg gcagaatgtt ggttttcccg
    26521 gtgagtgaat tacctcaact ttccaaaggt aaaggcaata aaatcatcaa tatttccgcc
    26581 gcagcggcaa aatccggtga tgaatattta gcccgtttat tagtcatcaa accaaccaac
    26641 tcgctggtct ttgtgtccgg taaacgcaaa atcacattaa aaccgagcga tgttgataac
    26701 taccgtggcg aacgagcaag aaaaggctca cagctagtga gagggcttag taccaattca
    26761 acggtagaga ttgttgagta aagagaagaa gcggttaggg ggtaaatcca acaattttgc
    26821 cccaaataac cgcttgcaat ggagttattg cttattcaaa taagcctttg tgaagcgaac
    26881 gaaccacatc gtctgcttct gcatttttca ctaaggtaca aacattattg ctgcttgctc
    26941 catagctgat taggcgaatg ttgtaattct caagagtgtg gaataatttt ttcgccacac
    27001 cggactgagc gtgtaagttg ttgccgataa tagcgactaa agcgaggtcg ctttctactt
    27061 gcacattgca atatgcgtta agctcatcga gtaattccgc tgataacata tctgcacctg
    27121 aagaggctga gcccgtttta tctagggtca atgcaacgct gacttcggaa gtggtaatca
    27181 catcaaccga aattttgtgt ttcgctaaaa tcgcaaatac attcgctaag aaaccttgtg
    27241 cgtgtagcat tgaaaggctg gaaagcgtga gtaaaatttg gttgcggcgt aatgcaatcg
    27301 cacggaaagt cgggcgtggt tgtggatcac gggttaccca agtgccgcct tgttccggtg
    27361 ctttgcttga gccaacatat acagggatat tgctacgcac tgccggtaat aaggttgctg
    27421 ggtgtaatac tttcgctcca aatgttgcca tttctgccgc ttcgttaaat gccattgtgt
    27481 caatgcgttg agcgttcggt acaacacgag gatcggtggt ataaatcccc ggtacgtctg
    27541 tccaaatgag tacatcgtta gcatttaata cttctgctaa caatgcagca gagtagtctg
    27601 aaccgccacg tcctaaagta gtggttttgc cttcatcatc acgaccaata aagccctgtg
    27661 taatcacaat tttgcctgat gcgattaatg gcttaatcac attgtctgat tgttgctggg
    27721 ttttctcgtc atttggtgct gcttttccat aatggctgtt tgttgccaca acgtcacgca
    27781 catctaccca tactgccggg tgtccacgtt caattaataa ttgcgtgaag attttggtgg
    27841 acatcatttc cccatggctg attaactcat cacttaaggc agctgaagta gcaaggctgg
    27901 ctgattctgc taatgtttca atacgttcta ataattcgtc gatttccgct ttaacggcat
    27961 cttgatgttg taatttttca ataatattgt attgaatttg gcggactgct gcgatgactt
    28021 catcacggtg ttctttttca cagccgttag caagttccac taagtaattg gttacgccag
    28081 cagaggcaga aagtaccacc acacgagtat ttgcatcagc aattacaata ttggcagaag
    28141 aggtcattgc atcaaaattt gcaacacttg taccaccaaa tttagccaca gaaagatgag
    28201 acataataaa aatttcctta aaacaaaaat agataaatat tgtgttaggg gatattcgga
    28261 aaggaaattt gagtagatta tacggtttta ttgttgaacc aattaatcag agcactccat
    28321 ttaatatggt gaaataacct attaaatgac agctgatagg attcaaccta ttcagccgat
    28381 gttaattcca gtctagtgaa ttcacacctc ggcaatcact cccatcactt aattctcaaa
    28441 cggccctagt tgcctaaaat caagttgcct gagtgttgca cctctcccgt aatggcaagc
    28501 ccattactct ttttcaacag tattgaaaag tgtgcataga aataccgttt tattaatgtt
    28561 ttgtcaatga atatttaggt a
//
LOCUS       DANLXD010000021        28473 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.021, whole genome shotgun sequence.
ACCESSION   DANLXD010000021 DANLXD010000000
VERSION     DANLXD010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 28473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28473
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.021"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..939
                     /locus_tag="PXD18_000735"
     CDS             <1..939
                     /locus_tag="PXD18_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL6301189.1"
                     /translation="QSSYGKIQINRNARPTGQYNLNNEELGAIKVPLIDLETQKQVDK
                     IIKQSNDFVQKSTQSYQEAETLLLENLGLRAFQADSNPVNVKSLKESFLQTGRLDAEY
                     YQTKYEQYWNLIQSQDYVFIRDEYLHITQKPDWTKPMYQYIEIGDVNIGDGSYQTNWI
                     ETQELPANAKTQAQTGDILISTVRPYRGAVTIIGENDQDLVVSGAFTVLRRKENSVFN
                     NEVLKVLLRSELYKDWLLQFNVGTSYPVIKDNDILNLPIPKISGEIQEKIAEYIRQSN
                     DLRQQAQNLLAQAKNNVEFEIENNSFNINELEVRGG"
     gene            963..1697
                     /locus_tag="PXD18_000736"
     CDS             963..1697
                     /locus_tag="PXD18_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL6301190.1"
                     /translation="MARSSYFARLAEWTLLEHLLVKQPENISVCSFGQSFGTSGRLDA
                     EYYQPKFASLFAQLANFKTMKLGEIVNLQKSVEPGSEAYQTEGIPFVRVSDLSKFGIS
                     QTDKYLHPKDFGNVVRPKKDSILLTKDGTVGIAYRVPQDLNVITSGAIVHLELKTDEV
                     LPDYLALALNSPAVQLQAERDAGGSIIQHWKPSEILDVVIPVLPKNIQQTISDKVQQS
                     FALRVESEVLLEKAKILVEQEIENMR"
     gene            1700..2335
                     /locus_tag="PXD18_000737"
     CDS             1700..2335
                     /locus_tag="PXD18_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301191.1"
                     /translation="MPNHNQDLKKEWFNKARIDYHSPFLMLWLSCNSWYNFHYSLGKD
                     RTHIDRIKSDTSNQNKLYKEFERIFTSGKIKEKTNLWNNIEQLHFALVQAELKYSGSN
                     IPSEYSKFNLENVLIDFPNKTNSVAYQNLVIHNAKTRAGKLKTQYANAHDLGNLVLVE
                     DIQKIFSGLLEIIYQVRCHLVHGSLSPTPENHEVVKYCYLILWDCLKGFCD"
     gene            complement(2603..3340)
                     /locus_tag="PXD18_000738"
     CDS             complement(2603..3340)
                     /locus_tag="PXD18_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6301192.1"
                     /translation="MIKIENLTLAHGIQHLSCYLPKGKLIGIMGANGAGKSSLLKAIA
                     GILRPTSGEIWLENCKLHALSAVERSRQFAYLAQQLNVAWQLSVYDVIALGLPAPLPP
                     EQERQKVRSVAEQLAISHLLDNTYQQLSGGEQTRVQLARCLMKQAPILLADEPIAALD
                     PYYQIDIMQQLKALTPTQTCVVVIHHLPLAYRFCDEIILLKNGNLLVSGNTQAVLNAE
                     NIATAFGVKAEMDWEKREMWGIEKLEV"
     gene            complement(3337..4305)
                     /locus_tag="PXD18_000739"
     CDS             complement(3337..4305)
                     /locus_tag="PXD18_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL6301193.1"
                     /translation="MKKLNIVLGSLLLLIVSNAAFYQLSDFALLKNAEGVLSDLRWLV
                     LGEIRLPRIGLAVLTGASLALAGNAMQGVFKNPLASPGLLGSSSGATAVSVFLLYYFS
                     APMGWLLFGGVAGALGAFLLVWLISFRHGTTMMILSGVAVNVLLGAAVTLLLSNAESP
                     WALAELYRWLQGSLVWATAEAVCWALPLILLGIVCLYRERRYLDLLTFGEETAATMGI
                     NLQRSFFTVSIGVALLVGATIPQTGTIGFIGLIAPHLARIWLKKPPSQLYLTSALIGA
                     LLLLIADLAVQYVPFFARIYIGTLTAILGVPFLIWILFTQQWRLAQ"
     gene            4486..4821
                     /locus_tag="PXD18_000740"
     CDS             4486..4821
                     /locus_tag="PXD18_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6301194.1"
                     /translation="MYHIERTEIFDQWLENLKDPLAVVTIARRIERAESGNFGDTKYI
                     AEGISEMRLNVSKGYRLYYAQKGSIIYILLNGGHKGTQQADIDKAKMLWAEIKQHMAE
                     QEKKNERII"
     gene            4805..5128
                     /locus_tag="PXD18_000741"
     CDS             4805..5128
                     /locus_tag="PXD18_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDL6301195.1"
                     /translation="MNELYDAPIPQATREKFGIQPFDAAEYLANDELIALYLAETLKD
                     GTDEEFIQALNTVARAKGMNELAKKAGIGRESLYQSLSSSKPRFETIRKIISALNLEL
                     SVVKA"
     gene            complement(5118..7004)
                     /locus_tag="PXD18_000742"
     CDS             complement(5118..7004)
                     /locus_tag="PXD18_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDL6301196.1"
                     /translation="MTQLDSVTVYSAYATPINQDKTASSVTVLTEKDFAARNATYVSD
                     VLKTVPGVAIGQQGGRGTLTSLFLRGAESRHTAVVIDGVKVNPINIGNFDFGGLPISN
                     IERIEVLRGEQSALWGSSAMGGVVYITTKSGLYKEKPFNAEVDLGLGSNNTRDASATL
                     SGFHNGFYYALHGDSHRTKGISALSKNHFSYTTETGSEVKTGGASERDGFHRDNGSLR
                     LGYDLGNKGVEVLAAQSSQTVHIDGYNSDVSGEYSRTRNQTFKLGGYWGNEQELLKHQ
                     ANISQFNSKATHFGSNARYSNEKQLNANYQLDVNFDREGEVTQAVSLLTDYAKTRYTS
                     DKYLREKTLSEKSAALEYRLFTEQDHSFSISGRYTDNSQFKNSITGRISGAYRLSPNL
                     CSDRLLLELAEPQQIRAMSPYSQKPLMMLDKLNTDKPTVEPELTALLPYADSTILLNE
                     TFYPQLTARLKQLGFKLVALNDSPQTPEQLFTLILQLGELTQNQAKAEKLVERLRLQK
                     IPLKQPLAETLILSETGMIEPHFPQYQTLLDLLGLSPLKSDLTPQNFSLEKLLLAQPK
                     QLLFLTDNQSYNNQAELLKHPALQKIWQKMSQNPPLVLPMKYTYCFDHGVWQGIQLMH
                     KLTP"
     gene            7034..7834
                     /gene="metF"
                     /locus_tag="PXD18_000743"
     CDS             7034..7834
                     /gene="metF"
                     /locus_tag="PXD18_000743"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HDL6301197.1"
                     /translation="MQQKWRMLWDSIDRLSPLKPKFVSVTYGANSGERDRTHSIVKSI
                     QEKTGIISAPHLTGIDATPEELKVIAKDYWDSGIRRIVALRGDIPKGYDKALFYASDL
                     VALLKSVADFDISVAAYPEVHPEAKSAQADLLNLKRKIDAGANHVITQFFFDVESYLR
                     FRDRCVSIGIDCEIVPGILPVTNFKQLQKMAAVTNVKIPTWMGKMYEGLDDDQTTRNL
                     VAASIAMDMVKVLSREGVNDFHFYTLNRSELTYAMCHTLGVRPDLTTA"
     gene            complement(7883..9043)
                     /locus_tag="PXD18_000744"
     CDS             complement(7883..9043)
                     /locus_tag="PXD18_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301198.1"
                     /translation="MKKSILLILSLFSASLFADVQLSPLPLPQIGKVSQFDLSEQGEL
                     VVINQQKQLWRVTQQAQKLADGVSTEIEPKAQYQRIALADQNGHFMLWTADKIYTSNI
                     PLAPKATMTALNFATIAVTKQNGQFKLARIETQGNQATITATAETEVLPDAHPLQIDF
                     DAETPNQGHIAVLAKPDDFTYQHGVLGDDVEAGEIQFLERHTLNPLAEKLTQQGRVFE
                     ANRWATFTENGKTKIVSVISGDGNGASTVVIGVKDGKLSIEAESEPLSTNRWQSPFIF
                     NRKLYAIQMPHLKGNLVEYSLKGNQLAERFITSGLSNHRYGDHETNLVATTETFALIP
                     QMGYQQVVVLDKTGKITELPTALPAGIKQTKADSNKAYLLLKNGEIWVAEEK"
     gene            complement(9103..10119)
                     /gene="galE"
                     /locus_tag="PXD18_000745"
     CDS             complement(9103..10119)
                     /gene="galE"
                     /locus_tag="PXD18_000745"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HDL6301199.1"
                     /translation="MAILVTGGAGYIGSHTLVELLNENREIVVLDNLSNSSEVSLERV
                     KQITGKSVKFYQGDILDRDILRKIFAENQIESVIHFAGLKAVGESVREPLRYYQNNVT
                     GSIVLVEEMLKANVNTIVFSSSATVYGDPQIIPIVESCPVGGTTNPYGTSKYMVERIL
                     EDTVKAFPQLSAVVLRYFNPVGAHESGLIGEDPNGIPNNLMPFISQVAVGKLPQLSVF
                     GGDYNTHDGTGVRDYIHVVDLALGHLKALDKHQNDAGFHVYNLGTGTGYSVLDMVKAF
                     EAANGITIPYKVVDRRPGDIAVCYSAPQKALEQLGWETERGLEQMMKDTWNWQKNNPN
                     GYKG"
     gene            complement(10207..10368)
                     /locus_tag="PXD18_000746"
     CDS             complement(10207..10368)
                     /locus_tag="PXD18_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HDL6301200.1"
                     /translation="MNETLLNNLVCPVSNEKLEWDKENNRLINPKLNIAYPIKNGIPE
                     LLPEAGVAL"
     gene            complement(10346..11347)
                     /gene="lpxK"
                     /locus_tag="PXD18_000747"
     CDS             complement(10346..11347)
                     /gene="lpxK"
                     /locus_tag="PXD18_000747"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HDL6301201.1"
                     /translation="MKIWQTKSLITWLLSPLSLLFWLISQARKRLYSLNILQSYRSPL
                     PMLVVGNISVGGNGKTPVVVWLVEQLQQRGVKVGVISRGYGGKAKTFPQLVTRESSAE
                     MVGDEPVLIVQRTNVPLAISPNRQQSIELLLNQFEPDIIITDDGLQHYALQRDMEWVV
                     VDGVRRFGNGFVLPAGGLRELPSRLNSVQAVICNGGTPQANEHLMTLEPSDAINLVTN
                     QRKPLSEFTQPCVAIAGIGHPPRFFTMLEKLGIPLAKTQGFADHQAFDKAQLAQFADS
                     QTPLLMTEKDAVKCHDFAQPNWWYVPVSATFSEKSTACLLAPILQKLGKEDERNTTQ"
     gene            complement(11349..11753)
                     /locus_tag="PXD18_000748"
     CDS             complement(11349..11753)
                     /locus_tag="PXD18_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6301202.1"
                     /translation="MKVHEKIKLLRENNHWTQDEMAQKLSMTTKGYAKIERGETISNL
                     PKIEQIAEVFNMDICELLSYGEEGKIYINNTDNNLTNSFISLGNGVEEIQRLQLIISH
                     KDELLAHKEEIIENQKRELALLRDLVETLKNK"
     gene            11888..12070
                     /locus_tag="PXD18_000749"
     CDS             11888..12070
                     /locus_tag="PXD18_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301203.1"
                     /translation="MNNQYNPLYGMLGILASAASVILPLYAAYKDYQFGENMLSLMDI
                     IIFPLGIVRGLMYLFG"
     gene            12074..12403
                     /locus_tag="PXD18_000750"
     CDS             12074..12403
                     /locus_tag="PXD18_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301204.1"
                     /translation="MKKYLFFAFMTLSNVAYPNLDEWYSASDKERREFIAKHFAEETV
                     RSDRNTPYDYAMCTGRMFAKQLTRDEVKDYPLANTKPQYLTRDRRIEIMSNLPREILQ
                     NCAKYIQ"
     gene            complement(12439..13191)
                     /locus_tag="PXD18_000751"
     CDS             complement(12439..13191)
                     /locus_tag="PXD18_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HDL6301205.1"
                     /translation="MAYKPPFTVTTKMLNLVVEISHKLGTLQLDFERNLHLRKNNRLR
                     SIQASLAIEANSLTIEQVTAIIKGKKVLGHPKDIREVKNAYDAYDEMMHYNPYSIKDF
                     LKAHKFLTADLVNDAGAFRSKDVGIYNFSGQLVHMGARPQFVENLINELFSWAKQDDT
                     PALIKSSVMHYEIEMIHPFSDGNGRMGRLWQNVLLAQWNPLFAWLPIETMVYENQQRY
                     YQMLSLADSQNDSTGFIEFMLEMILETLLKLK"
     gene            complement(13230..14477)
                     /gene="clpX"
                     /locus_tag="PXD18_000752"
     CDS             complement(13230..14477)
                     /gene="clpX"
                     /locus_tag="PXD18_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATP-binding subunit ClpX"
                     /protein_id="HDL6301206.1"
                     /translation="MAFEKEPHCSFCGKKRTEVDQLVEGTEGYICNECIEESYALLHG
                     EEEPLIDENQDDEGSFFTNVPTPHELHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRSA
                     LSNHQATNGVELGKSNILLIGPTGSGKTLLAETLARRLNVPFAVADATTLTQAGYVGE
                     DVENVIQKLLMKCDFEAEQAERGIVFIDEIDKITRKSESASITRDVSGEGVQQALLKL
                     LEGTVANINPQGGRKHPKGETIPVDTSKILFICGGAFAGLDKIVEARTNTQGGIGFAA
                     ALKKDKDRQDLTELFKQVEPEDLVKFGLIPELIGRLPVVTPLQELDEEALIQILTEPK
                     NAIIKQYQALFEMEGVELHFTKDALISIAQKAISRKTGARGLRSIVENLLLDTMYDLP
                     TLNAKKVTIGKGCVENGDKPKVE"
     gene            complement(14477..15070)
                     /gene="clpP"
                     /locus_tag="PXD18_000753"
     CDS             complement(14477..15070)
                     /gene="clpP"
                     /locus_tag="PXD18_000753"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HDL6301207.1"
                     /translation="MALVPMVVEQTSKGERSYDIYSRLLKERIIFLNGQVEDNMANLI
                     VAQLLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQAASMGAF
                     LLSAGAKGKRFALPHARIMIHQPLGGARGQATDIQIQAEEILRLKATLTRRMAEHSGQ
                     SYEKVLADTERDNFMSAEEAAEYGLIDKVLTSRSEVA"
     gene            15182..15565
                     /locus_tag="PXD18_000754"
     CDS             15182..15565
                     /locus_tag="PXD18_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HDL6301208.1"
                     /translation="MTLTEIYQKFERCKSWEERYRLLIQLSRLLPKPSEQELAQIAEI
                     EGCESRLWFEFQAEPRKVVAYSDARLMQGILFIVSVALTEKTAEELKGFDLKTMFDEL
                     KISQNLTSTRLNGLGQLQKHIMMNL"
     gene            complement(15669..15745)
                     /locus_tag="PXD18_000755"
     tRNA            complement(15669..15745)
                     /locus_tag="PXD18_000755"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(15709..15711),aa:Asp,seq:gtc)
     gene            complement(15834..16589)
                     /locus_tag="PXD18_000756"
     CDS             complement(15834..16589)
                     /locus_tag="PXD18_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL6301209.1"
                     /translation="MKKSIYDTPIFFERYQQLRQNPISMNEVVEKPTMFSLLPDLTGK
                     KVLDLGCGTGVHLAHYLTLGAEKVVGLDLSELMLQQAESDLSAHWQKGNDFSLYCLPM
                     ERLNEISEGDFDVVTSSFAFHYIADFSELLAKISQKMTACGTLIFSQEHPIVTCYREG
                     YRWEKNQEKQQVAYRLNYYREEGERDRSWFQQPFKTYHRTMATIVNNLIQGGFEIVQM
                     EEPMLAGQPRWHNEFKDLQHRPPLLFIKAIKQK"
     gene            complement(16649..17644)
                     /gene="trpD"
                     /locus_tag="PXD18_000757"
     CDS             complement(16649..17644)
                     /gene="trpD"
                     /locus_tag="PXD18_000757"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HDL6301210.1"
                     /translation="MQALLDKLFANQALAQAESHRFFSEVIKGNVSNEQLAAALIALK
                     LRGETVDEIAGAAKAALENANPFSTPDYPFADIVGTGGDGHNTINISTTSAIVAATMG
                     YKIAKHGNRSVSSKTGSSDVLSHLGINVDVSPETARLALDETNICFLFAPTYHSGFKY
                     AAPVRQALKTRTIFNILGPLVNPAHAKRQLLGVYSPELVKVYAETVKALGYEHTIVVY
                     GAGLDEVAVHGETQVAEIQNGQIDYYTLTPEDFGIERHSLEDLKGGEPAENAEKVTAI
                     LQGKGKLAHIDAVAANVALLMKTFGEDDLKANVQKVKETLESGKALETLRKLSTY"
     gene            complement(17662..18048)
                     /locus_tag="PXD18_000758"
     CDS             complement(17662..18048)
                     /locus_tag="PXD18_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005543439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HDL6301211.1"
                     /translation="MISVYGLKQTLADRRALIADVIFDCMQMSLGVPKQRHALRFDLL
                     DAENFYPPINRSQDFIVIEINLMQGRSEQLKKRLIKGLFSALHTKVGIVPMDVEITIK
                     EQPEHCWGFRGMTGNEATDLEYQAHR"
     gene            complement(18041..18631)
                     /locus_tag="PXD18_000759"
     CDS             complement(18041..18631)
                     /locus_tag="PXD18_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDL6301212.1"
                     /translation="MANILFIDNFDSFTYNLVDQFRELGHQVTIFRNDYPLEDFLAKA
                     ETTENCLVALSPGPGNPAEAGNLLEIIRRLKDKVPMIGICLGHQALIEAFGGKVVHTG
                     TVLHGKVSRIEHDNQAMFSGINNPMLVARYHSLMGDELPAEFIVNAKFEHIVMAIRHK
                     TLPICGFQFHPESILTVQGTKLLKQSVEWLLGEKND"
     gene            complement(18641..20197)
                     /gene="trpE"
                     /locus_tag="PXD18_000760"
     CDS             complement(18641..20197)
                     /gene="trpE"
                     /locus_tag="PXD18_000760"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HDL6301213.1"
                     /translation="MPQLTITQTELPYFADTTRVYYALCGERPHTLLLDSAEIQSKNS
                     VKSLLFAKSAVHIFCEDQTVTFHALTPNGEAVLPLIANALSLLNPAPTCKFLDKNDRL
                     QAIFPTISNQLDEDSKLKTTTVFDGLRTVSQLFADSTSPIYLGGLFSYDLVANFIPME
                     NISLQDDGLSCPDYTFYLAEQLVTIDHQTETAVLNTFCFEPNEQTNLNQQAVEFTQKL
                     ANLSHIELPLANQTATSEATANIEDEDFKAIIRKLKHHINIGDVFQIVPSRRFSLPCP
                     NTLASYKQLKINNPSPYMFYMQGENFTLFGASPESALKYSQANRQLEIYPIAGSRPRG
                     FDEQGNIDPELDSRLELELRLDQKELAEHLMLVDLARNDVARVSESGTRRVVDLMQID
                     RYSQIMHLVSRVIGTLRKDLDALHAYQACMNMGTLTGAPKIKAMQLIYQVEQQKRHSY
                     GGAVGYLTSDGNLDTCIVIRSAFVQNGIAYVQAGCGEVLDSDPQLEADETRHKARAVL
                     KAIGQVNAKA"
     gene            20339..20956
                     /locus_tag="PXD18_000761"
     CDS             20339..20956
                     /locus_tag="PXD18_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HDL6301214.1"
                     /translation="MTQFFYIHPDNPQQRLINQAVEIIRNGGVIVYPTDSGYALGCAM
                     GDKHAMDRIVAIRKLPENHNFTLVCSDLSELSIYALVNNQAYRLIKNNTPNPYTFILP
                     ATKELPRRLMTKRKTVGIRVPDNAIALALISALGEPILSCSLMLPETEMTESDPDEIR
                     DHLQNRVDLIIHGGYLGQQPTTVVDLTDDVPVIIREGSGDPTSFN"
     gene            21102..22169
                     /gene="rluB"
                     /locus_tag="PXD18_000762"
     CDS             21102..22169
                     /gene="rluB"
                     /locus_tag="PXD18_000762"
                     /EC_number="5.4.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2605) synthase RluB"
                     /protein_id="HDL6301215.1"
                     /translation="MTTFQKKSTATFRADKRGESRPSFKKEEQKSERKFGKTSEKPPR
                     PTSKPLTQRIAKKVEKTTASEVASQEKKAKVVGEKLQKILARAGQGSRRELEEIIAAG
                     RVSVDGKMATLGDRVQVSSSTKIRIDGHLVNLMPAQKEICRVLMYYKPEGELCTRSDP
                     EGRSTVFDRLPRLSGARWIAVGRLDINTSGLLLFTTDGELANRLMHPSREVEREYSVR
                     VFGNIDDAMLQRLRKGVQLEDGPANFKQIKVVGGTGLNQWFDVTLTEGRNREVRRLWE
                     SQGVEVSRLIRIRYGNIKLDKGLPRGGWEEMGLEQVNYLRELVGLPPETETKVEVGVN
                     RRRTNIRQIRKAVKQHQKYRG"
     gene            22235..24007
                     /locus_tag="PXD18_000763"
     CDS             22235..24007
                     /locus_tag="PXD18_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDL6301216.1"
                     /translation="MSWDIVATLAVTGIAVFLFATEKMRMDVVAILVLCSLVLLGQVD
                     TKSALSGFSNSATVTVTAMFVLAAGLQNSGALDSVGSLLAKVKSPWLFLLVLCGVNAA
                     VSPFVNNTAVVAVLIPIVIAAAQNIKMAPSKALIPLSFSSQMAGVCTLIGTSTNLLVN
                     AIAQKQGHSGFGMFEFAPLGIIFLVVGVAYLLVTSRFLLPESHLQLEDGEGFGKYVSE
                     LKVNKDSVLIGKSTFESGLNEEFNLFTIGVLRDGERLSTPSHQVLQKHDILLLRGESE
                     NLAKVREKYGLHHVVYGRRENDEDNLDEDLMVAEVMISPISRWIGGTIPILQQRWNKN
                     ATVLGIQRQSKVIRERLRTTAFKMGDILLLTLPKEDMETLRQDKDFIVLSSDLVKTEE
                     SWKSKFALGVMVLVVATAALGWVPISVSALIGAVAMCVAGCLTAEEAYQSIDWKIILV
                     LAGLLPLGEAMANSGAAQFIVDNTLGKVGEFGPLVVLAVLYLLTMVLTEFMSNAGTAV
                     LLTPIAVSTAKMLGVDASPFIIAVMFAAATSFMTPVGYQTNTMVYGAGGYKFTDFIKI
                     GLPLNVIYWILGIVLIPIFFPFNP"
     gene            complement(24097..28248)
                     /locus_tag="PXD18_000764"
     CDS             complement(24097..28248)
                     /locus_tag="PXD18_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HDL6301217.1"
                     /translation="MNKIYRIVWNHAKRTWIVASELSRSANKSNATNTSLTTNIIKLS
                     TLSLALSAGFASAATYSPTYGTIPDNNPQTSIAIGDGSKVNSTLVSTITGLEGNSGKV
                     STALGYNTTATADFSTALGGFANASFASTAVGGQATADKRSVAVGYNATAMGLREVFI
                     GDHAGLNHSNSTEYNIGIGYSASSNVTGNNTISIGNTAGDGTSGSHNIAIGTYANAKL
                     AGPTTNVTSDDNIAIGNSALANGVNNYKTTAATGETVIGKATAVGSHANATGIVSSAY
                     GAEANATAIHSTAIGAKSQANGDNSTAIGYEAKTSGHGATSLGYYANATANLTTAVGT
                     NAGATSDYASAFGREANASGGSATALGNRATASGAASVALGVSAKATNQRTIAIGESS
                     NASAFNATAIGRNATAEHTDSIALGSNSVTAIAIPTTNATVNGITYSDFAGTNPIATV
                     SIGAEGKERTITNVAAGRISLSSTDTINGSQLYLTQQAIGNVAATTANILGGGAAVTE
                     NGNITFPTYALVNGTPDADKEGKQGRYTTVSAALSALNTAVISPLTFAGDTGTNFERH
                     LGSTVKIKGGSTGILTENNIGVVADGNSTLTIKLAEKVNLGANGSLTTGDTVVNNTGI
                     TIANGVADKPVSLTKSGLDNGGNKIANVAAGDVDTDAVNVSQLKQAISKFATHYVSIS
                     DDGIQRANYDNSGSSGVNPMAIGVATSANGELATALGSEAEANGERTTAVGPRATADG
                     MNATSIGYNANANATNALAVGSAANANADTSTAIGTASTATATRATALGSKSEATGEN
                     STAVGYEASSIGADSLAAGYNANASGTQSTALGNSANAGGIWSTSVGRNANAAGSSAI
                     ALGNSANAAGVASIALGVSSQATTTAAVALGQNAKATHQGSVALGTNSETVATVATKS
                     ATLNGNTYTFAGTTPSSTVSIGSVGNERTLTNVAAGRILDSSTDAINGSQLYAAYTEI
                     DGLNTKVNELSNGALTFVDDAGTEIVRKLGTSLNVKGGADATILTDNNIGVVATDANT
                     LTVKLAKDIDLTPAGSVAVGNSKLNNNGLTINNGPSVTMTGVDAGKLKITNVADGDIS
                     PISADAVNGSQLYDTANTIATALGGNSSVNANGAVSAPSYTVVDGAPTNEVSKTVNNV
                     GSAITALNDAVTSPLTFAGDTGTPSQRKLGSTVTVKGGVSNESQLTDNNIGVISNGNG
                     SLTVKLAKDIKVNSVTAQTVTANIAVADTVKTGDTTIDTNGLTIVGGPSITKTGINAA
                     GTKVTNVKAGTEDTDAVNFSQLKATEKNINNKINNIDSKVNKVDKRLRAGIAGATATA
                     GLPQAYLPGKSMLATAGDTYRNEAAIAVGYSRISDNGKVIYKLTGNSNTRGDFGGSIG
                     MGYQW"
BASE COUNT         8025 a         5755 c         6083 g         8610 t
ORIGIN      
        1 caaagttctt atggaaaaat ccaaattaac cggaatgcac gcccaacagg acaatacaat
       61 ctgaataatg aggagcttgg tgcgattaaa gtccccttaa ttgatctaga aacacaaaag
      121 caggtagata aaatcattaa gcaaagtaat gattttgtac aaaaatcaac acaaagttac
      181 caagaagctg aaactttatt attagaaaat ctcggtttga gagcttttca agctgatagc
      241 aatcctgtaa atgttaaatc cttaaaagag agtttcttac aaacaggacg attagatgca
      301 gagtattatc aaactaaata tgagcaatac tggaatttaa ttcaatcgca agattatgtt
      361 tttattcgtg atgaatattt acatatcacc caaaaacctg attggacaaa accgatgtat
      421 caatatattg aaattggtga tgttaatatt ggtgatggtt catatcaaac gaattggata
      481 gagacacaag aattacctgc taatgctaaa actcaagccc aaacaggtga tattttaatt
      541 tcaaccgttc gcccttatcg tggtgcagta acaattatcg gtgaaaatga tcaagattta
      601 gttgttagtg gtgcgtttac agtattacgc agaaaggaaa actctgtttt taataatgaa
      661 gttttaaagg tgctattacg gtcagaacta tataaagatt ggttactaca atttaatgta
      721 ggtacgagtt atcctgtaat taaagataac gatattttga atttaccaat tcctaaaata
      781 agtggagaaa tccaagaaaa aattgctgaa tatatccgcc aaagcaacga tttaaggcag
      841 caagcacaaa atttactcgc tcaagctaaa aataatgtag agtttgaaat tgaaaataat
      901 tcatttaata tcaatgagtt agaagtgcgg ggggggtaga tcctgctaag ccttatggtt
      961 tattggcgag atcttcttat tttgcacgtt tagcagaatg gactttatta gaacatttac
     1021 ttgtcaaaca gcctgaaaat atttcggtat gttcattcgg tcaatcattc ggtacaagcg
     1081 gtcgtttaga tgcagaatat taccaaccta aatttgcaag cttatttgca caattagcca
     1141 atttcaaaac gatgaaatta ggtgagattg ttaatttaca aaaatcggta gaaccgggct
     1201 cggaagctta tcaaacagag ggaataccct ttgtgcgtgt atcggattta tctaaattcg
     1261 gcatcagcca aacagataaa tacttacatc cgaaagattt tggcaatgtt gtaagaccta
     1321 aaaaagacag tatattactg actaaagacg gcacagtcgg cattgcttac cgtgttccgc
     1381 aagatttgaa tgtgattaca tcaggggcaa ttgtgcatct agagcttaaa actgacgaag
     1441 ttttacccga ttatttggcg ttagcattga attctcctgc tgtacaatta caagcggaaa
     1501 gagatgcggg aggctctatt atccaacatt ggaaaccgtc tgaaatttta gatgtagtga
     1561 ttccggtatt acctaaaaat atccagcaaa ccattagcga caaagtacaa caaagttttg
     1621 cattgagagt agaaagtgaa gttttactgg aaaaagctaa aatacttgta gaacaagaaa
     1681 tagaaaatat gaggtaataa tgcctaatca taatcaagat ttgaaaaaag agtggtttaa
     1741 taaagcaagg atagattacc actctccttt tttaatgtta tggctcagtt gtaatagctg
     1801 gtataacttc cattattcct taggtaagga tagaacacat attgatagaa taaaatcgga
     1861 taccagtaat caaaacaaac tttataaaga gtttgaaaga atattcacct ctggaaaaat
     1921 aaaagaaaaa actaatttat ggaataatat tgagcaactt cattttgcat tagttcaggc
     1981 agagttaaaa tattcaggta gcaatattcc aagtgaatat tctaaattta acttggaaaa
     2041 tgtgcttatt gattttccta acaagacaaa ttctgtagca tatcagaatc tagttattca
     2101 caacgcaaaa acgcgtgcag gaaaattaaa aacacaatat gcaaatgctc acgatttagg
     2161 caatttggtt ttagtagagg atatccaaaa aatattttcc gggttattag aaataattta
     2221 tcaagttcgt tgccatttgg tacatggtag cttaagtcca acacctgaaa accacgaagt
     2281 tgttaaatat tgctatttga ttttgtggga ttgtttaaaa ggattttgtg attagttatt
     2341 gtcaataaag ctacaagcgg tcaattctcc caaaactttg caaatttccc cgcaaaactg
     2401 accgcttgtt ctcctctatc cattcacctc aaccaacttt tctctctacc cctactcaaa
     2461 atcggttaaa caatctgttg aggtaaatgt tgtgtcggaa tgggatttaa tcttaatgaa
     2521 actgaaaaaa tcttctgcca agcaaatttc cctaaaattg gaagttcatt tccaatttct
     2581 caaaaaatca cccaaaccgg aactacactt ccaatttttc aatcccccac atttcccttt
     2641 tctcccaatc catttcagct ttcaccccaa aagccgttgc aatattttcg gcatttaaga
     2701 ccgcttgtgt gttgccgctg acgagtaaat tgccgttttt aagcagaatg atttcatcac
     2761 aaaaacggta ggcaaggggc aaatgatgaa tcaccaccac gcaggtttgt gttggagtta
     2821 gggctttgag ctgctgcata atatcgattt ggtagtaggg gtcgagggcg gcaatcggtt
     2881 catcggcaag caagatcggg gcttgtttca tcaaacaacg ggcgagttgc actcgggtct
     2941 gttcaccgcc ggagagctgt tggtaagtgt tgtccagcag gtgagaaatc gccaattgtt
     3001 cggcaaccga acgcaccttt tgacgctctt gttcaggcgg aagcggtgcg ggcaagccga
     3061 gtgcaatcac atcatacacc gaaagttgcc acgccacgtt gagctgttgg gcgaggtagg
     3121 caaattgtcg gctcctctca acggcggaaa gggcgtgcag tttgcaattt tccagccaaa
     3181 tttcaccgct tgtcgggcgt agaatgccgg caatcgcttt gagcaacgag gatttccctg
     3241 ccccgtttgc gcccataatg ccgatcaatt tgccttttgg cagatagcaa gagaggtgtt
     3301 gaataccgtg ggcaagggtg agattttcaa tcttgatcat tgtgccaatc tccattgctg
     3361 ggtgaataaa atccaaatca aaaacggtac gcccaaaatt gccgtgagcg tgccgatgta
     3421 aattcgggca aaaaacggca catattgcac cgccagatct gcaatcagca gtaacaacgc
     3481 cccgattaaa gcggaggtaa gataaagctg ggacggcggt tttttcagcc aaatacgggc
     3541 aagatgaggg gctatcaagc cgataaaacc gatggtgccg gtctgtggaa tcgttgctcc
     3601 gaccaacagc gccacgccaa tgctaacggt aaaaaaactg cgttgcaggt tgatgcccat
     3661 tgttgctgcc gtctcttcgc caaaggtgag caggtcgaga taacgccgtt cccgatagag
     3721 gcagacaatg ccgagcaaga tcaacggtaa cgcccaacat actgcctctg cggttgccca
     3781 gactaatgag ccttgcaacc agcggtagag ttccgccaac gcccacgggc tttcggcatt
     3841 ggaaagcagt aaagtcaccg ctgccccgag caacacgttt accgccacgc cacttaaaat
     3901 catcattgtt gtgccgtggc gaaagctaat cagccacacc agcaaaaatg cccccagcgc
     3961 ccctgccaca ccgccaaaca gtagccagcc catcggggct gaaaaatagt agagcagaaa
     4021 tacgctcacc gccgttgccc ccgaactgct cccaagcaaa ccggggctgg caagcggatt
     4081 tttaaacacg ccctgcatcg cattgccggc aagcgcaagg ctggcgcccg tcagcaccgc
     4141 caagccaata cggggcagtc gaatttcacc cagcaccagc cagcgcagat cgcttagcac
     4201 gccttccgca tttttaagca aggcaaaatc gctcagttgg taaaaggctg cgttgctaac
     4261 aatcagcaac aacaagcttc caagcacaat gtttaatttc ttcattcttc tttctctcat
     4321 caaacgtgca aattatacca tagcgccaaa gtcaagctga aaacgctatt tttgcgatca
     4381 tcatcgaaaa actagcgttt gccgaatgta acccacgaca ggctttgcta tattccttca
     4441 atcagcctaa gttttgtatt taaaacatta cagattgggg gtagaatgta ccatattgaa
     4501 cgcactgaaa ttttcgacca atggcttgaa aatttaaaag atccacttgc tgtggtgacc
     4561 attgcaagac gtattgaacg tgccgaaagc ggaaattttg gcgataccaa atatatcgca
     4621 gaaggaattt ccgaaatgag gctaaacgtc agcaaaggtt atcgccttta ctatgcgcaa
     4681 aaaggtagca ttatttatat actactaaat ggcggacata aaggcacgca acaagctgat
     4741 attgataaag ctaaaatgct atgggcagaa attaaacaac atatggcaga acaggagaaa
     4801 aagaatgaac gaattatatg acgccccaat tccacaagct actcgtgaaa aatttggcat
     4861 tcaacctttc gatgccgctg aatacctcgc caatgacgag ctaatcgccc tttatttggc
     4921 ggaaacattg aaagacggca cggacgagga gtttattcaa gcattgaata ccgtggcacg
     4981 agcgaaagga atgaatgagt tagcgaaaaa agcagggatc gggcgtgaaa gtttgtatca
     5041 aagcctttcc agcagtaagc cccgttttga gactatccgc aaaattatta gcgcattaaa
     5101 tttggagttg tcggtcgtta aggcgtaagt ttgtgcatta attgtatccc ctgccaaacc
     5161 ccgtggtcga aacagtaggt gtatttcatc ggtaggacaa gcggtggatt ttggctcatt
     5221 ttttgccata ttttttgtaa tgctgggtgt ttgagcagtt cggcttggtt gttatagctt
     5281 tggttatcgg tgaggaacaa taactgtttg ggttgcgcta acagcagttt ttctagcgag
     5341 aaattctgtg gcgtgaggtc gctttttaat ggtgacagac cgagaagatc caacaacgtt
     5401 tgatattgcg gaaaatgcgg ttcgatcata cccgtttcgc ttagaattaa agtttcagca
     5461 agcggttgtt ttagcggaat tttttgcaaa cgtagccgtt ccaccagctt ttccgctttg
     5521 gcttgatttt gggttagctc gcccagttgt aaaatcagtg tgaaaagctg ttcgggtgtt
     5581 tgcggactgt cgtttaatgc gactaactta aagccaagct gtttcagccg tgcggtgagt
     5641 tgcggataga aggtttcatt cagcaaaatg gtgctgtcgg catagggcaa cagggcggtg
     5701 agttcaggct caacggtggg cttgtccgtg ttcagtttat ccaacatcat caacggcttt
     5761 tgggaatagg gcgacatcgc ccgaatttgc tgtggttcgg caagttccag caacagacgg
     5821 tcgctacaca aatttggcga taaacggtaa gctcctgaaa tacgcccagt gatagaattt
     5881 ttaaactgtg aattatcggt gtaacggcca ctaatagaaa aactgtgatc ttgttcggta
     5941 aataagcgat attctagtgc cgcacttttt tcggataagg ttttttcacg caaatattta
     6001 tcagaggtat agcgtgtttt tgcataatct gtcagtaaac tgaccgcttg tgtcacttct
     6061 ccttcacggt caaagtttac atctaattga taattcgcat taagttgttt ttcgttgctg
     6121 tagcgagcat ttgaaccgaa atgtgttgct ttactattga attggctgat atttgcttgg
     6181 tgtttcagca gctcttgttc atttccccaa taaccgccta atttaaaagt ttgattgcga
     6241 gtacgggaat attcaccgct aacgtctgaa ttatagccat caatatgaac ggtttgggaa
     6301 gattgagcgg caagaacttc tacccctttg ttaccgaggt cataacctaa acgtaaagag
     6361 ccgttatcac gatgaaagcc atctcgttcg cttgcaccac cggttttcac ttctgagcct
     6421 gtttctgtgg tatagctgaa atggttttta ctcagtgcgg aaatgccttt ggtacgatgg
     6481 ctatcaccgt gtaaggcata gtagaaaccg ttgtgaaatc cggaaagtgt tgcgctggca
     6541 tcacgggtat tatttgagcc taaaccaaga tcgacctccg cattgaatgg tttctctttg
     6601 tataaaccgc ttttagtggt gatataaact acaccaccca tagcactgct tccccaaagg
     6661 gcggattgct cgccacgcaa cacttcgata cgttcgatat tgctaatcgg taagccacca
     6721 aaatcgaaat ttccaatatt aatcggattg acttttacac cgtcaatcac aaccgcagta
     6781 tggcgagatt ctgcccctcg taaaaataag ctagtaagag taccacgccc accttgttgc
     6841 ccaatcgcca cgcccggcac agtctttaac acatcactca cataagtcgc attgcgtgcg
     6901 gcaaaatctt tttcggtaag aaccgtcacg ctggaagcgg ttttgtcttg gttgattggg
     6961 gttgcatagg cggaatagac tgttacggaa tcaagctgag tcatctcatt ttgtgcaaaa
     7021 gctgtacttg ctagtgcaac agaaatggcg aatgctgtgg gattctattg atcgcctaag
     7081 tcctttaaaa ccgaaatttg tttcggtaac ttatggagca aattctggtg agcgagatcg
     7141 tacacacagt attgtgaaat caatccaaga aaaaacaggg atcatttcag ctccgcactt
     7201 aacaggcatt gatgcaacac cggaagaatt aaaggtaatt gccaaagatt attgggatag
     7261 tggtattcgc cgaattgttg ctttgcgtgg cgatataccg aaaggttatg ataaagcact
     7321 attttacgcc tcagatttag tcgctttatt aaaatcagta gcagatttcg atatttccgt
     7381 ggctgcctac cctgaagttc accctgaagc aaaatcagca caggcagatt tacttaactt
     7441 gaaacgtaaa atcgatgcgg gtgcaaacca cgttattacg caattctttt ttgatgtaga
     7501 gagttattta cgttttcgtg atcgctgtgt ttctattggg attgattgtg aaattgtgcc
     7561 gggtattctg ccggtgacaa atttcaagca gttgcaaaaa atggcagcag tgactaatgt
     7621 taagatcccg acttggatgg gtaaaatgta cgaagggtta gatgatgatc aaaccaccag
     7681 aaacttagtt gcagcaagta ttgcaatgga tatggtgaaa gtgctttctc gtgaaggggt
     7741 gaatgatttc cacttctata ccttaaatcg tagtgaactc acttatgcaa tgtgccatac
     7801 tttaggcgta agacctgatt taacaactgc ataatcgaac attaaggctg tatagctaaa
     7861 tgagctatac ctccttatag ttttacttct cttcagccac ccaaatctcg ccatttttta
     7921 ataataaata ggctttgttg gaatcggctt tggtttgttt aattccagcc ggcagggcgg
     7981 ttggcaattc agtgatcttg cctgttttat ccaacacaac aacttgttga tagcccattt
     8041 ggggtatcag tgcgaaagtc tctgttgtcg ccactaaatt ggtttcgtga tcaccatagc
     8101 ggtgattgct taagccggag gtaataaaac gttcagctaa ttggtttcct ttcaggctgt
     8161 attcaaccaa attgcctttt agatgtggca tttggattgc atagagcttg cggttaaaga
     8221 taaacggcga ttgccaacgg ttagtcgaca gcggctcact ttcggcttct attgataatt
     8281 ttccgtcttt aacgccaatc acaacagtgc tggccccatt gccatcgcca gagataacag
     8341 aaacgatctt ggtttttcca ttttctgtga aagtcgccca gcggttggct tcaaatactc
     8401 gcccttgttg ggtgagtttt tctgctaagg ggtttagggt atggcgttct agaaattgaa
     8461 tttcgcctgc ctctacatca tcgcctaata caccgtgttg atatgtaaaa tcatcaggct
     8521 ttgcaagtac agcaatatgc ccttggttag gtgtttcggc atcaaaatca atttgcagag
     8581 ggtgagcatc aggcaacacc tcggtttctg cggtggcagt aatagtggct tggtttcctt
     8641 gcgtttcaat tctggctaac ttaaattgtc cgttttgttt ggtcacggca atggtggcaa
     8701 aattaagggc ggtcattgta gctttcgggg caaggggaat gttggaggta tagattttat
     8761 cagccgtcca cagcataaaa tgcccgtttt gatccgctaa cgcaattcgt tggtattgag
     8821 ctttaggttc aatctcggtg gaaactccat ctgccagttt ttgagcttgt tgtgtgactc
     8881 tccataattg tttttgttgg ttaattacca ctaattcgcc ttgttctgaa aggtcaaatt
     8941 ggcttacttt gccaatttgg ggaagtggga gtggagaaag ctgaacatca gcaaacaaag
     9001 aagcggagaa caagcttaag attaacagaa tagatttttt cattagcgtt acctaaaaag
     9061 aagatttaaa tgataaaggg agatgttatc tccctttacg ctttagcctt tataaccatt
     9121 cgggttattt ttttgccaat tccaagtgtc tttcatcatt tgttctagcc cacgctcggt
     9181 ttcccaaccc agttgctcta acgctttttg tggagcggag tagcaaacgg caatatcgcc
     9241 cgggcggcga tctaccactt tgtatggaat agtaatgcca tttgcggctt caaaggcttt
     9301 taccatatct agcaccgaat aacctgttcc tgtgcctaaa ttgtaaacgt ggaaaccggc
     9361 atcattttgg tgcttgtcta aggcttttaa gtgaccaagt gctaaatcta ccacgtggat
     9421 ataatcacgc acacctgtgc catcgtgagt attataatcg ccaccaaaca ccgataattg
     9481 aggtaatttg cccacagcca cttggctgat aaacggcatt aagttatttg ggataccgtt
     9541 tggatcttca ccgattaaac cgctttcgtg agcccctacc gggttgaagt aacgcaatac
     9601 taccgcactt aattgtggga aggctttaac ggtatcttca agaatgcgtt caaccatata
     9661 tttggacgta ccgtaagggt tggttgtgcc accgacaggg caagattcca caatcgggat
     9721 aatctgcgga tcaccataaa cggtcgccga tgaactaaac acaatggtat tcacattggc
     9781 ttttagcatc tcttctacca atacaatcga gccggttaca ttgttttgat agtaacgtag
     9841 cggttctctg acgctttcgc ctacagcttt taaaccggca aagtgaatta ccgattcaat
     9901 ctgattttcc gcaaaaattt tgcgtaaaat atcacgatct aaaatatcgc cttgatagaa
     9961 ttttacgctc ttgccggtga tctgcttcac acgctcaagt gatacttcag aggaattaga
    10021 aagattatct aacaccacga tttcacgatt ttcgtttaat aattcaacta atgtatgtga
    10081 accgatgtag cctgcaccac ctgtaactaa aattgccatt ttatgttcct ctataaaatt
    10141 aatacgaacc aaggttattg ttgctatttt acccgattta atcaggcttg ctaatattta
    10201 ttcagtttat aatgccactc cggcttccgg cagtaattcc ggaatgccgt ttttaatcgg
    10261 gtaagcaata ttgagcttag ggttaattaa tcggttgttc tctttgtccc attctaattt
    10321 ttcattagag acagggcaga cgaggttatt gagtagtgtt tcgttcatct tcttttccta
    10381 gtttttgtag aatcggggct aacaaacaag cggtcgattt ttctgaaaat gttgcagaaa
    10441 ccggtacata ccaccaattt ggctgtgcaa aatcgtggca ttttaccgca tctttctcgg
    10501 tcattaataa cggcgtttgg ctatcagcaa attgagccag ctgagcctta tcaaaggctt
    10561 gatgatcggc aaagccttga gttttggcaa gcggaatgcc taatttttct aacatcgtaa
    10621 aaaagcgtgg tgggtgaccg ataccggcaa tcgccacaca gggttgggta aattcgctta
    10681 atggcttgcg ttgattggtg actaaattaa ttgcatcaga cggttcaagc gtcattaaat
    10741 gctcgttagc ttgcggtgtg ccgccgttgc aaataaccgc ttgcacggag tttaaacggc
    10801 tcggtaattc acgcaatccg cccgccggca gcacaaaacc gttaccgaaa cgccttacgc
    10861 catcaaccac cacccattcc atatctcgct gtagggcata gtgttgcaag ccatcatcgg
    10921 tgatgatgat gtccggctca aactgattta atagtaattc aatgctttgt tggcggtttg
    10981 gagaaatagc caaaggcaca ttggttcgct gaacaatcag aaccggttca tcacccacca
    11041 tttcagcaga actttctcgg gtaactaatt gcggaaacgt tttcgcttta ccgccatagc
    11101 ctcgagaaat cacgcctact tttacgccac gctgttgcag ttgttccacc agccaaacga
    11161 ccactggcgt tttgccgttg cctccaaccg agatattacc gactaccagc ataggcaaag
    11221 gcgaacggta cgattgcaaa atattcagag aatataaccg cttgcgagct tgactaatca
    11281 gccaaaacag caacgaaagc ggcgaaagca gccaagtgat aagggatttt gtttgccaga
    11341 ttttcatatt atttattttt aagtgtttca actaaatctc gtaataaggc taattcacgt
    11401 ttttggtttt cgataatttc ttctttatgg gctaataatt catctttgtg ggagataata
    11461 agttgtaaac gttgaatttc ttctactcca tttcctaatg agataaatga attagtgaga
    11521 ttattatctg tattatttat gtaaattttt ccttcttccc cataggataa taattcgcaa
    11581 atatccatat taaatacttc tgcgatttgt tctattttcg gtaaattaga gatagtttca
    11641 ccacgttcta tttttgcata acctttggtt gtcatactta atttttgagc catttcatct
    11701 tgtgtccaat gattattttc tcgcagtaat ttgatttttt cgtgtacttt catataacac
    11761 ctatagattg tgggagttgg gatataactt gatgtggtaa aggataaatt ttgtggattg
    11821 tagcagttta ttgagcaatt tagaatagag taaattttat cttaagctca caggagaaga
    11881 aacattcatg aataatcaat ataatccatt atatggaatg ctaggtattt tagcgtcagc
    11941 tgcatcagta attttgcctc tttatgcagc atataaagac tatcaatttg gggagaatat
    12001 gttatctctt atggatataa ttattttccc gttaggtatt gttcgtggac ttatgtattt
    12061 atttggatag attatgaaaa aatatttatt ttttgctttt atgacattaa gtaatgttgc
    12121 ttatcctaat ttagatgagt ggtactcagc ttcagataaa gagcgaagag aatttatcgc
    12181 aaaacatttt gcagaagaaa cagtaagaag tgatagaaat acaccgtatg attatgctat
    12241 gtgcactggt agaatgtttg ctaaacaact gactcgagat gaagtcaaag actacccttt
    12301 ggcaaacact aagccgcaat atttaacccg tgatagacgg attgagatta tgtctaattt
    12361 acctcgtgaa atattacaaa attgtgctaa atacatacag taattttatg agtaacacca
    12421 ctttggaatt aagtggtgtt attttaattt taataatgtc tctaaaatca tctccaacat
    12481 aaactcaata aagccggtag aatcattttg gctgtctgcg agagaaagca tttgataata
    12541 acgttgttga ttttcgtaaa ccattgtttc aatcggcaac caagcgaaaa gtgggttcca
    12601 ttgtgctaaa aggacatttt gccataatcg acccattctg ccgtttccat cactaaaggg
    12661 gtgaatcatt tctatttcat agtgcataac cgagctttta atgagtgcag gtgtatcatc
    12721 ttgtttagcc caagagaaca actcattaat caaattctct acgaattgag gacgagcccc
    12781 catatgcaca agttgcccac tgaaattata aatgccgaca tcttttgaac gaaaagcccc
    12841 tgcgtcattt actaagtcag cagtaagaaa cttatgtgct ttgagaaaat ctttaatcga
    12901 gtaaggatta tagtgcatca tttcatcgta agcgtcatag gcatttttga cttcacgaat
    12961 atctttgggg tgtccgagaa cctttttgcc cttaatgatt gcggtaactt gctcaatcgt
    13021 taatgaattt gcctcaatag ctaaagaggc ttgaattgat ctcaagcggt tattttttct
    13081 aagatgtaaa ttacgctcaa aatccaattg tagcgttccc aatttatgag aaatttctac
    13141 aaccagattc agcattttag tggtaactgt aaaaggtggt ttataagcca ttttgcaata
    13201 atcctaaaaa attaaaccgc ttgtcattgt tactccacct tcggcttatc gccgttttca
    13261 acacagcctt tgccgatggt gacttttttc gcattgaggg ttgggagatc gtacattgtg
    13321 tcaagtaata agttctcgac aatagaacgt aacccacgag ccccggtttt gcggctaatc
    13381 gctttttggg caattgaaat taatgcatct ttggtgaagt gcaattcaac gccttccatt
    13441 tcgaataagg cttgatattg cttgatgatc gcatttttcg gctcggttaa gatttgaatc
    13501 agagcttctt cgtccaattc ttgcagcgga gtcaccaccg gtaaacgccc gattaattca
    13561 ggaattaagc cgaatttgac taaatcttcc ggttcaactt gtttgaatag ctcggttaaa
    13621 tcttggcgat ctttatcttt tttcaatgcc gctgcaaaac cgataccacc ttgagtgttg
    13681 gtacgggctt ccacgatttt atctaaaccg gcaaaagcac cgccgcaaat aaagagaatt
    13741 ttggaggtgt ccaccggaat ggtttcgcct ttcgggtgtt tgcgaccgcc ttgtgggtta
    13801 atgttcgcca ccgtgccttc aagtagtttt aataaggctt gttgaacacc ttcgcccgat
    13861 acatcacggg taatggatgc actttccgat ttacgggtga ttttgtcgat ttcatcaata
    13921 aaaacaatgc ctcgttccgc ttgttcggct tcaaaatcgc atttcattaa taatttttga
    13981 atcacgtttt cgacatcttc tcccacatag cctgcttggg taagggtagt agcatcagct
    14041 accgcaaaag gtacgtttaa acggcgggca agggtttctg ccaacaaggt tttaccgcta
    14101 ccggtcggcc cgattaataa aatattactt ttacctaact ctacgccatt agtggcttga
    14161 tggtttgaca atgcacttct taagcgtttg tagtggttat aaacggccac cgaaagcact
    14221 tttttcgcgt gttcttgacc gatgacataa tcatctaaat gagcgtgtaa ttcgtgaggt
    14281 gtcggcacat tggtgaaaaa actgccttca tcgtcttggt tttcatcaat taacggctct
    14341 tcttcaccgt gtaataaggc gtaggattcc tcgatacatt cattacaaat atagccttcc
    14401 gtgccttcga ctaattgatc gacttcggta cgttttttac cgcaaaaact acagtggggt
    14461 tctttttcaa atgccattac gccacctcac tgcgagaagt taatactttg tcgattaagc
    14521 catactcagc ggcttcttcc gcagacataa aattatcacg ctcggtatcg gctaacactt
    14581 tttcatagct ctgaccgctg tgttctgcca tacggcgggt aagggtagct ttcaagcgta
    14641 aaatttcttc cgcttgaatt tgaatatcgg ttgcttgacc tctcgctcca cctaaaggtt
    14701 ggtgaatcat aatacgagcg tgcggcagag caaagcgttt accttttgcc ccggctgaaa
    14761 gcaaaaatgc ccccattgaa gccgcttgcc ctgtgcaaag ggttgctaca tcgggtttga
    14821 tgaagttcat tgtatcgtaa attgccaagc ctgctgttac cacgccaccc ggtgagttaa
    14881 tgtataaata gatgtctttt tccggatctt cggcttctaa aaacagaagt tgtgccacaa
    14941 tcaggtttgc catattgtct tccacctgac cgtttaaaaa aataatacgt tcttttaata
    15001 aacgtgaata aatgtcgtaa gaacgttcgc cttttgaggt ctgttccacc accattggga
    15061 ctaatgccat tttgttttcc tctgtcgtaa tacaaaatct cgctattcta gcaaattttc
    15121 agaaaatcat taacaacaag cggtcagatt gttaaaatct tttgcaaatg atgaggaaat
    15181 tatgacatta acagaaattt accaaaaatt tgaacgttgt aaatcgtggg aagaaagata
    15241 ccgcttgtta attcagctaa gtcgcttgtt accaaaacca agtgagcaag agttggcaca
    15301 aatagcggaa attgagggct gtgaaagccg tttatggttt gaatttcaag ctgagccacg
    15361 aaaagtagtg gcatatagcg atgcccgttt aatgcagggg attttattta ttgtgagtgt
    15421 agctttaact gaaaaaacgg cagaagagct gaaaggcttt gacttaaaaa cgatgtttga
    15481 tgagctaaaa atttcacaaa atttaaccag cacaaggtta aatgggttgg gtcagttaca
    15541 gaaacatata atgatgaatt tgtaattcac cctcgcccct tgtgggagag ggtgaataaa
    15601 atccgcagga ttttattcgg gagaggggaa tataaaaaac ctctgatttc tcagaggctt
    15661 aaatttgttg gcggaacgga cgggactcga acccgcgacc ccctgcgtga caggcaggta
    15721 ttctaaccag ctgaactacc gctccatact ggtgctaaaa taatagtggt ttcctcaaca
    15781 ttgagcaaat agtttttgca aaatagtgtt taattggttg taaaataacc actttatttc
    15841 tgcttgatcg ccttgataaa cagcaacggc ggacggtgct gtaaatcttt aaattcattg
    15901 tgccaccgag gttggcctgc cagcattggt tcttccattt gcacaatctc aaacccgcct
    15961 tgaataaggt tattcacaat ggttgccatt gtgcggtggt aggttttaaa gggttgttga
    16021 aaccaacttc tgtcccgttc gccctcttcc cgataatagt tcaagcggta agcaacttgt
    16081 tgtttttctt ggtttttctc ccaacgatag ccttctcggt aacaggtgac aatcgggtgt
    16141 tcttgcgaga aaatcagcgt gccacaagca gtcatttttt gcgaaatttt tgcaagtagt
    16201 tcggaaaaat cagcaatata atgaaacgca aaagagctgg ttactacatc gaaatcgccc
    16261 tcgctgatct catttaatcg ctccatcggc aggcagtaaa gggaaaaatc gttgcctttt
    16321 tgccaatgag cagaaagatc gctttctgcc tgttgtagca ttaattcaga taaatccaac
    16381 cccaccactt tttctgcacc gagcgttaaa taatgggcta aatgaactcc tgtgccacaa
    16441 cctaaatcca gcactttttt gccggttaag tctggcagta gagagaacat tgttggcttt
    16501 tccaccactt cattcatact tattggattt tgtcgaagtt gttggtaacg ctcaaagaaa
    16561 atcggagtgt cgtaaatgct ttttttcact taatagcctt taaacaaata taaaataagg
    16621 cgggttaaaa cccgccacta cgatatgatt agtaagtcga taattttcgc aaagtttcta
    16681 acgcttttcc actctcaagc gtttctttta ctttttgcac attggctttt aaatcatctt
    16741 ctccaaaggt tttcattaat aatgcgacat ttgctgccac cgcatcaata tgagccagtt
    16801 taccttttcc ttgtaaaata gcggttactt tttcggcatt ttctgcaggt tcaccgcctt
    16861 tgagatcttc taacgaatgg cgttcaatgc cgaaatcttc cggcgttaag gtgtaatagt
    16921 cgatctgtcc gttttgaatt tccgcaacct gcgtttcgcc gtgaacggca acttcatcta
    16981 aacctgcacc gtataccaca atagtgtgtt cgtaacctaa ggcttttacg gtttcagcat
    17041 agactttcac taactcaggg gagtacacac cgagtaattg gcgtttagcg tgagccgggt
    17101 ttaccaacgg ccctaaaata ttgaaaatcg tgcgggtttt taaggcttgg cgaacagggg
    17161 cggcatattt gaatccgctg tggtaggttg gggcaaacaa aaagcagatg ttggtttcat
    17221 ctaaagcaag gcgtgccgtt tcaggtgaaa cgtcaacatt aatacctaaa tggcttaata
    17281 catcgcttga gccggtttta cttgatacgc tacggttgcc gtgtttggca attttatagc
    17341 ccattgtggc ggcaacaatc gcacttgtgg tagaaatgtt gatggtatta tgcccatcgc
    17401 cacctgtgcc gacaatatcc gcaaaagggt aatcaggcgt tgagaacgga ttggcatttt
    17461 caagtgcggc ttttgcagca cctgcaattt catcaacggt ttcgccacgc agttttagag
    17521 cgattaaggc agcagcaagt tgttcatttg atacattgcc tttaataact tcactaaaaa
    17581 aacggtgaga ttccgcttgg gctaaggctt ggttggcgaa taatttatct aaaagtgctt
    17641 gcatagtctc ttccttttta attagcgatg tgcctgatat tccaaatcgg ttgcctcgtt
    17701 gccggtcatt ccacgaaagc cccagcaatg ctctggctgt tctttaatgg tgatttcaac
    17761 gtccattggc acaatgccga ctttggtgtg taaggcacta aatagtcctt taattaagcg
    17821 ttttttgagc tgttcgctcc gcccttgcat caggtttatt tcaatcacaa taaaatcttg
    17881 gctacggtta attgggggat agaaattttc cgcatccaat aagtcaaaac gcaaagcgtg
    17941 gcgttgtttt ggtacgccaa ggctcatttg catacagtca aaaatcacgt ctgcaatcag
    18001 ggctctgcgg tctgctaagg tttgttttaa tccatataca ctaatcattt ttttctccta
    18061 ataaccattc caccgactgc ttaagtaatt ttgtgccttg cacggttaaa atggattccg
    18121 ggtggaactg gaaaccgcaa atcggtaagg ttttgtggcg aattgccatc acaatatgtt
    18181 caaatttcgc attaacgata aattctgccg gtaattcatc gcccattaat gagtgataac
    18241 gagcgacaag cattggattg ttaatgcctg aaaacatcgc ttggttatcg tgttcaatac
    18301 gagaaacttt gccgtgcaat actgtgccgg tatgcactac tttgccgcca aaggcctcaa
    18361 ttagagcttg atgtcctaaa caaatgccaa tcatcggtac tttgtctttc agacggcgaa
    18421 taatttccaa taaattgcct gcctcagccg gattacccgg gccgggggaa agggcaacca
    18481 aacaattttc ggtggtttca gctttggcta aaaaatcctc aagcggataa tcattgcgga
    18541 aaatcgttac ctgatgccct aattcacgaa attgatcgac caagttatag gtaaaagagt
    18601 cgaaattatc aataaaaaga atatttgcca tagtttgtcc ttatgctttt gcattcacct
    18661 gcccaatcgc ttttaacacc gcgcgtgctt tatggcgtgt ttcatctgcc tctaattgtg
    18721 gatcggaatc cagcacctca ccacaaccag cttgcacata ggcaatgcca ttttgaacaa
    18781 aggcggaacg gatcacgata caggtatcta aattgccgtc tgaggttaaa tagcccaccg
    18841 caccgccgta gctatggcgt ttttgttgct cgacttggta gatcagttgc attgccttaa
    18901 ttttcggagc accagttagc gttcccatat tcatacaagc ttgataagcg tgcagagcgt
    18961 caagatcttt tctaagtgtg ccgatcacac gagaaactaa gtgcataatt tgcgaatagc
    19021 ggtcaatttg cattaaatca accacacggc gagtgccgga ttcgctcaca cgagccacat
    19081 cattgcgggc aagatcgact aacattaaat gttcggcaag ctctttttgg tctaaacgca
    19141 gttctaattc caaacgggaa tctaattcag gatcgatatt accttgttca tcaaaaccgc
    19201 gtgggcgaga gccggcaatc gggtaaattt ccaactggcg gttggcttgc gaatatttca
    19261 acgcactttc aggcgacgcc ccaaacagag tgaaattttc gccctgcata tagaacatat
    19321 acgggcttgg attgttgatt ttgagctgtt tatagctggc aagagtattc gggcaaggca
    19381 agctgaaacg gcgagagggc acaatttgga acacatcacc gatattaata tggtgtttga
    19441 gtttgcggat aatcgctttg aaatcttcat cttcaatatt ggcggttgcc tcactcgttg
    19501 cggtttggtt cgctagaggc agctcaatat gtgacagatt tgcaagtttt tgcgtaaatt
    19561 cgaccgcttg ttggttcaaa ttggtttgtt cattcggttc aaaacagaag gtgtttagca
    19621 ccgcagtttc ggtttggtgg tcgattgtaa ccagttgctc tgctaaatag aaagtgtaat
    19681 ctgggcaact taagccatca tcttgcaggc tgatattttc catcggaata aaatttgcca
    19741 ccaaatcgta gctaaataat ccgcccaaat agataggcga tgtggaatca gcaaacagtt
    19801 ggctcaccgt tcttagcccg tcaaacacgg tggtggtttt gagcttgctg tcttcatcta
    19861 actggttgct gatggttggg aaaatcgctt gcaagcggtc gtttttgtct aaaaatttgc
    19921 aagtcggagc agggtttaac aggctcaatg cgtttgcaat caaaggtaaa accgcttctc
    19981 cgtttggggt taaagcgtgg aaagtcacgg tttgatcttc acagaaaata tgcactgccg
    20041 atttcgcaaa cagcaaactt tttacactgt ttttactttg aatttccgct gaatctaata
    20101 atagcgtatg tgggcgttcg ccgcataatg cgtaataaac acgggtcgta tcggcaaaat
    20161 agggtaattc tgtttgagta atcgttaatt gaggcatagc aaattcctat tcaatttttc
    20221 gtactattaa actagtacat taaaaagaag tcaagcaatt attccagata attatgcgag
    20281 cttgggcgaa cttggtgtat aattagccca atttttagaa agtcgaaggc ttgagactat
    20341 gacacaattt ttttatatcc accccgacaa cccacagcaa cgcttaatta accaagcggt
    20401 agagattatt cgaaacggtg gcgtaattgt ttaccctacc gattcaggct atgctctcgg
    20461 ttgtgcaatg ggcgataagc acgcaatgga tagaattgta gcaattcgta aattgccgga
    20521 aaatcacaat tttaccttag tttgtagtga tttatccgag ctttctatct acgcgttggt
    20581 caataatcaa gcctatcgct taattaagaa taataccccg aatccttata cttttattct
    20641 gccggcaact aaggaacttc ctcgcaggct gatgacaaag cgtaaaacag tggggattcg
    20701 tgtgccggat aatgcgatcg cattggcgtt aatttccgcc ttaggtgagc cgattctttc
    20761 ttgctcgtta atgttgccgg agacggaaat gaccgagtca gaccctgatg aaattcggga
    20821 tcatttgcaa aatcgggtgg atttaattat ccacggtggt tatttagggc agcagcctac
    20881 aacggtagtt gacttaaccg atgacgtgcc ggttattatt cgagaaggat cgggcgatcc
    20941 aacatcgttt aattaaattg atgttgtatg attaatatat agaattatgc gtaggggggc
    21001 tgtgccagtc cgtattaata tcgttatttg gacaggcaca ggacctgtcc ctacaatgaa
    21061 aatcaaattc agacgcttgt gaaagcgaca aaaggaacct tatgacaact tttcaaaaaa
    21121 aatcaactgc gactttccgt gcagacaaac gtggtgaaag ccgtccctca tttaaaaaag
    21181 aagagcaaaa atctgaacgc aaatttggta aaacgtcaga aaaaccacca cgtccaactt
    21241 ctaagccatt aacgcaaaga attgcaaaaa aagtggaaaa aacgaccgct agtgaagtgg
    21301 catctcaaga gaaaaaagcc aaagtagtag gtgaaaagct acaaaaaatc ttagcgcgag
    21361 cagggcaagg ttctcgccgt gaattagaag agattatcgc tgctggacga gtgagcgtgg
    21421 acggtaaaat ggctactctt ggtgatcgtg tgcaggttag ctcatcgact aaaatccgca
    21481 ttgacggaca tttagttaat ttaatgccgg cacaaaaaga gatctgccgt gtattaatgt
    21541 attacaaacc ggaaggggaa ctttgcaccc gttccgatcc ggaaggacga tccaccgtat
    21601 ttgaccgctt gcctcgttta agtggcgctc gttggattgc ggtcgggcgg ttagatatta
    21661 acacctcagg cttattattg ttcactaccg atggcgaatt agccaaccgt ttaatgcacc
    21721 caagccgtga agtcgaacgt gaatattcgg tgcgtgtgtt cggcaacatt gacgatgcga
    21781 tgttacaacg cttacgcaaa ggcgttcagt tggaagacgg accggcaaac tttaaacaaa
    21841 ttaaggttgt gggtggcaca ggcttgaacc aatggtttga tgtgacttta accgaagggc
    21901 gtaaccgtga ggttcgccgc ctgtgggaat cgcaaggggt agaagtcagc cgtttgattc
    21961 gtatccgtta cggcaatatc aaattagata aaggcttacc tcgtggcggc tgggaagaaa
    22021 tgggcttaga acaagtcaat tacttgcgtg agctggtagg gttaccgccg gagactgaaa
    22081 ctaaagtgga agtgggggta aaccgccgcc gaaccaatat ccgtcaaatt cgtaaagcgg
    22141 taaaacaaca tcaaaaatat cgtggctaaa caccatcttt ggggctgcat tagttctgct
    22201 aatgcagcta ttttctttca aaaaaggagc atttatgtct tgggatattg ttgcaacatt
    22261 ggcggtcact gggattgccg tatttttatt tgcaactgaa aaaatgcgaa tggacgtagt
    22321 tgcgatttta gtgctgtgtt cattagtatt attagggcag gttgatacca aatctgctct
    22381 gagtggattt tcaaactcag ctactgtaac cgtaactgca atgtttgtat tagctgctgg
    22441 tttacaaaat agtggtgctt tagatagtgt aggcagttta cttgctaagg taaaatctcc
    22501 ttggttattc ttgcttgtac tctgtggcgt aaatgctgct gtttctcctt ttgtgaataa
    22561 tacggcagtg gtcgcagtat taattccgat tgtgattgcc gcagcacaga atataaaaat
    22621 ggctccttcc aaagccctta ttccgttatc attttcttct caaatggcag gtgtttgtac
    22681 actgatcggc acttccacta atctattagt taatgcaatc gctcaaaagc aagggcattc
    22741 cggtttcggt atgtttgaat ttgccccttt ggggattatt tttttagtgg ttggggttgc
    22801 ctatttatta gtgaccagcc gtttcttatt acccgaatca catttgcaac ttgaagatgg
    22861 tgaggggttt ggaaaatatg tttctgaact taaagtaaat aaagactctg tattaattgg
    22921 caaaagtaca tttgaatcag gattaaatga agaatttaat ctatttacta ttggtgtttt
    22981 gcgtgatggg gaaagattat cgacaccgag tcatcaagta ttgcaaaaac atgatatttt
    23041 attgttgcgg ggtgaatcgg aaaatttagc aaaagtacga gaaaaatatg gattgcacca
    23101 cgttgtgtat ggacgccgtg agaatgatga agataatctg gatgaagact tgatggtggc
    23161 tgaagtgatg atttctccta tttctcgttg gataggaggg actattccta ttttacaaca
    23221 gcgttggaat aaaaatgcaa cggtgttagg cattcaacgc caaagtaaag taattcgtga
    23281 gcgtttacgc accactgctt ttaaaatggg ggatatttta ttactcacat taccaaaaga
    23341 ggatatggag acgttacgcc aagataaaga ctttattgtg ttatcttctg atttagtcaa
    23401 aacggaggaa tcgtggaaaa gtaaatttgc tttaggggta atggttttgg tggtggcaac
    23461 agcagcctta ggctgggttc ctatttcagt gagtgcctta attggtgcag ttgcgatgtg
    23521 tgttgctggt tgtttaacgg ctgaagaagc ctatcaatct attgactgga aaatcatttt
    23581 agtcttagct ggattactgc cattaggtga agcgatggca aatagtgggg cggcgcaatt
    23641 tattgttgat aacacgcttg gtaaagtagg ggagttcggg cctttagtgg tgttagctgt
    23701 attatattta ctgacaatgg tgttaaccga atttatgagt aatgcaggga ctgccgtgtt
    23761 gcttacgcct attgcggttt ctaccgctaa aatgttaggg gtagatgctt ccccattcat
    23821 tattgccgta atgtttgcgg ctgcgaccag ctttatgacc cctgttggct atcaaaccaa
    23881 cacgatggta tacggtgcag gtggctataa attcacagat tttattaaaa ttggtttacc
    23941 gctaaatgta atctattgga ttttagggat agtattaatt ccgattttct tcccttttaa
    24001 tccataattg atagataatt atagaaaaaa ggtttacaga tcagaaactc tgtaaacctt
    24061 ttttattcag caataaatca attttctatt ggaaaattac cattgataac ccatgccaat
    24121 actaccacca aagtcgcctc tggtattgct gttaccagtt aatttataga taaccttccc
    24181 gttatctgaa atccgagaat aacctactgc gattgcagct tcattacggt atgtatctcc
    24241 agccgttgct aacatacttt tacctggtag atatgcttgc ggtaaacctg cggttgcagt
    24301 tgcaccagca ataccagcgc gtaaacgttt atcaactttg tttacttttg aatcaatatt
    24361 attgatctta ttattgatat ttttttctgt tgcttttaat tggctaaagt taactgcatc
    24421 agtatcttca gttcctgctt ttacgttagt cacttttgtt cctgctgcat taatacctgt
    24481 tttagttata ctcggtcccc ctacaatagt taatccatta gtatcaatgg ttgtatcacc
    24541 agtcttaaca gtatcggcta cagcaatgtt agctgttact gtttgagctg tgacagaatt
    24601 aactttaata tctttagcta atttaaccgt taatgaacca ttaccatttg aaataacccc
    24661 gatattatta tcagttagtt gtgattcgtt agatacccca ccttttactg taacagtaga
    24721 acctaattta cgttgagatg gcgtgccggt atcacctgca aatgttagtg ggctggttac
    24781 tgcatcattt aacgcagtaa ttgcagagcc tacattattg accgttttac taacttcatt
    24841 tgtaggagcg ccatcaacca cagtatagct tggggctgaa acagcaccat ttgcatttac
    24901 acttgaatta ccacctaaag cggtagcaat agtatttgcc gtatcgtaaa gttggctacc
    24961 attaactgca tctgctgaga taggtgaaat atcaccatca gctacattag ttatttttaa
    25021 tttgccagca tcgacacctg tcattgtgac acttgggcca ttattaatgg ttaagccgtt
    25081 gttatttagt tttgaattac caacagctac ggagccggca ggagttaaat caatgtcttt
    25141 cgctaattta actgttaatg tgttagcatc tgttgccact acaccgatat tattatcagt
    25201 caatatggtt gcatcggccc cacctttaac attcagagaa gtacctaatt tacgaacaat
    25261 ttcagtacca gcatcatcta caaaagtaag tgctccatta cttaactcat tcactttcgt
    25321 gtttaaacca tcaatttcgg tataagcagc ataaagttgt gaaccgttga tagcatccgt
    25381 tgatgagtcc aaaatacgac ctgctgcaac attcgttaaa gtacgttcat tgcctacaga
    25441 accaatactt acagttgagc ttggcgtagt acctgcaaat gtgtatgtat tgccatttag
    25501 cgttgcactt tttgttgcaa ctgtggctac tgtttcagag ttagtaccta atgcaacaga
    25561 accttggtgt gttgcttttg cattttggcc aagagccact gcagcagttg ttgttgcttg
    25621 tgatgaaaca cctaatgcaa tagaagctac accggctgca tttgcactat tacctaaagc
    25681 aatcgcagag ctacctgcag cattggcatt tctacccaca gaagttgacc atattccacc
    25741 tgcattagca gagttaccta aagcggttga ctgtgtaccc gaagcatttg cgttatagcc
    25801 tgcagcaaga gaatctgcac cgattgaact tgcttcataa cctacagcgg ttgaattttc
    25861 accggtagct tcagatttag agcctaatgc agttgcacgg gtagctgtcg ctgttgaagc
    25921 tgtaccaata gctgttgagg tatcagcatt tgcattggct gcagaaccaa ccgcgagggc
    25981 atttgttgca tttgcattcg cattgtagcc tatagaagtg gcattcatac catcagctgt
    26041 tgcgcgagga ccaactgcag ttgtacgttc accgtttgct tctgcttcag agcctaatgc
    26101 ggttgccagc tcaccattag cacttgttgc aacgccgata gccattggat taacaccgct
    26161 agagcctgaa ttatcatagt tagcacgttg aatgccatca tctgaaatac taacataatg
    26221 agttgcaaat ttgctgatag cttgtttgag ttgactgaca ttgaccgcat cagtatctac
    26281 atcgcctgcg gcaacattgg cgattttatt accgccatta tctaagccag atttagtaag
    26341 acttaccggt ttgtctgcaa cgccgttagc gatggtgata cctgtattgt taacaacggt
    26401 atcacctgtt gttaatgaac cattagcgcc taagttaact ttttctgcta attttatggt
    26461 taaagtacta ttgccatcag ctacaacacc aatattattc tcggttaata tgcctgtaga
    26521 tccgcctttg atcttgactg ttgaacctag atggcgctca aaattagttc ctgtatcacc
    26581 ggcaaaggtt aacggactga tcaccgctgt gtttaatgcg cttagtgctg cagaaacagt
    26641 agtgtatctc ccttgtttgc cttctttatc tgcatctggt gtgccattca ctaaagcgta
    26701 ggttgggaaa gtgatatttc cattttcagt aacagctgcc ccaccaccta agatatttgc
    26761 ggttgttgca gcaacattac ctatagcttg ttgtgttaaa tataattgtg aaccgtttat
    26821 ggtatctgta gagcttaaag atatacgtcc tgcagcaaca ttggtgatag ttctctcttt
    26881 gccttccgcc ccaatactta ctgtagcaat tggatttgtt ccagcaaagt cactatatgt
    26941 aataccattt acagttgcat ttgtagttgg tatggctata gctgtaactg agttgctacc
    27001 tagcgctatc gaatcggtat gttcagcagt ggcatttcga cctatagcgg ttgcattaaa
    27061 ggcggaagca tttgatgatt ctccgattgc aattgtgcgt tgatttgttg ctttagcgct
    27121 tacccctagt gcaacagaag ccgcgcctga tgcagtagca cgattgccta aagcggttgc
    27181 agaacctcca cttgcattgg cttcacgacc aaatgcagaa gcataatcgc tggttgcacc
    27241 cgcattagta ccaacagcag tagttaaatt tgctgttgca tttgcataat aacctaatga
    27301 ggttgcaccg tggcctgaag tcttcgcttc ataaccaatt gctgttgagt tatcgccatt
    27361 tgcttgagat tttgcaccaa ttgctgtgga gtgaatagct gttgcgttag cttcagcacc
    27421 ataggcggag ctaacaatac cagttgcatt ggcatgacta cctacagcag ttgcttttcc
    27481 tattaccgtt tctcctgttg ctgctgtagt tttgtaatta ttaacaccat ttgcaagagc
    27541 ggaattaccg atggcgatat tatcatcact ggttacattt gtagtaggtc ctgctagttt
    27601 tgcattagca taagtaccaa ttgcaatatt gtggctacca ctagtaccgt ctccagcagt
    27661 attaccaata gaaatcgtat tgtttcctgt tacattagag ctagccgaat aaccaatacc
    27721 aatattgtat tctgtgctgt tagagtgatt taatccggca tgatcgccaa taaaaacttc
    27781 acgtaagccc attgcggttg cattgtaccc tactgctacg gaacgtttat cggcagtggc
    27841 ttgcccacca acagctgttg aagcaaaact agcgttagca aagcctccta atgcagttga
    27901 aaaatcggct gtcgcggttg tgttataccc taatgctgta gaaactttac cgctatttcc
    27961 ttctaagcct gttattgtgc ttactagtgt tgagttaact ttagatccat caccaattgc
    28021 gatagatgtt tgtgggttat tatctggtat ggtcccatag gttggtgaat aggttgcagc
    28081 acttgcaaaa cctgcagaaa gcgcaagact tagtgtgctg agtttaataa tattagtggt
    28141 tagtgatgta tttgttgcat tagatttatt agcacttctt gataattcag aagcaacaat
    28201 ccaagttcgt tttgcatggt tccaaacaat gcgataaatt ttattcatag aactactcct
    28261 gttcttattt tttaataatt ttaatgattt gagtattgcc tagccaaata tatacaatag
    28321 gctgaaaaat tatataggtg aggttttatg gtgtaaatag tggcttttta ggaataaata
    28381 tagcaatttt ttgatataaa tgtattattt taaattttat gttttgtact aatattgagg
    28441 tggagtgcag agttttattt ggtttttggt atg
//
LOCUS       DANLXD010000022        28437 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.022, whole genome shotgun sequence.
ACCESSION   DANLXD010000022 DANLXD010000000
VERSION     DANLXD010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 28437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28437
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.022"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            23..202
                     /locus_tag="PXD18_000765"
     CDS             23..202
                     /locus_tag="PXD18_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301218.1"
                     /translation="MFKEKGYDEFLAEKIRLGLEDMQSGNGLSLDESKARTKQLIERK
                     ARELANFEQENIIYG"
     gene            195..482
                     /locus_tag="PXD18_000766"
     CDS             195..482
                     /locus_tag="PXD18_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6301219.1"
                     /translation="MAKTLRISSRAQNDIEEILASVIEYTGFESSGIRLQEDIYQKFE
                     TIAYMPSAAGRLREDGTREAFTRRYRIVYTELENEVWIITIIHSSRLYPRI"
     gene            complement(608..2710)
                     /locus_tag="PXD18_000767"
     CDS             complement(608..2710)
                     /locus_tag="PXD18_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDL6301220.1"
                     /translation="MKSFKLLPVSAAVLSVLAANAVAQTASTDAVVLDTVTVTDNQGL
                     KVQSNVVTTKKKDESTQTDLRGLLKDEPAISLGGGNGTSQYLYIRGMGQNSIDVKVDN
                     TYSDSQILYHQGRHMLDPALVKIVSVQKGAGSASAGIGQTNGAVIAKTVDALDLLKNS
                     DKNFGAKLGTGFSTNHAHNFNATLYGKGEIFDALVSGNLVRDRDYKGGKDYVNQFGTN
                     RVPYSALDKTSFLAKLGATLGDHRFVLSHSSERNEGQRLVREEFDVAPNGTKVSPYNR
                     LTVERQAPANRRITVQRTNLEWTGKNLGFAQEATANVYQLVQGRWSENETGNGYAGGV
                     DYATKTKIVTHGANVNFDSALHENVLLKYGVNYRHQEAKPHTKFNPLVKNQEKTDTGV
                     YVEAITAPVDKVTLTTGVRYDHFKFKAMDGKERSNGAFSPSVGLIYEPIEHLSLSASH
                     NYATRSPRLYDALTAHGNRKIVSIGSNTKAEKARNTEIGFNYNNGTFSFDGSYFWQDI
                     KDALGGGRDSHNPNNELIMNLGKIKNRGYELNAGYHNGGFTARIGVAHSKPRFYSPTI
                     WEVNRQTGKREEKPLLSTNPEYASAIGRTWTASLSYRFEQPNLEVGVHHRIVEKVKPE
                     DNFFVTGGTLQTNTGTGKDGYNVTDITLNWKPLKDDSVNVNFAVDNVANKKYNAHGQR
                     GQLSARGREFRAGVNYTF"
     gene            2993..3739
                     /locus_tag="PXD18_000768"
     CDS             2993..3739
                     /locus_tag="PXD18_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDL6301221.1"
                     /translation="MQLRHKQIMEYIQQFDEANVQELAEHCGVSIETIRRDLNKLDKD
                     GLLHRTHGGAVSHKKRDIGRSFTTRQRLNSEAKRSIAENVLEYLQPESVIALDASSTS
                     WNVAQRIPNIPCTVVSSSMRIIYSLSHKPHIKTIATGGIYSEKYDAFYGPLSEQLLTR
                     LKIDLAILSCTGIADGAIWESNEINISLKRKLIANSKQVFLLADHSKFERKDLFRIED
                     LSCIDKLFINQPPPDFLKNYCLAHQIEIII"
     gene            3935..5698
                     /gene="fucI"
                     /locus_tag="PXD18_000769"
     CDS             3935..5698
                     /gene="fucI"
                     /locus_tag="PXD18_000769"
                     /EC_number="5.3.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005619331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose isomerase"
                     /protein_id="HDL6301222.1"
                     /translation="MTTLKSTPVKIGIRPTIDGRRLGVRESLEDQTMNMAKAVAQLIQ
                     SEVRHPNGDFVECVIADSTIGGVAEAAACAEKFKRENVGAVITVTPCWCYGSETIDMD
                     PHMPKAIWGFNGTERPGAVYLAAALAGHSQLGLPAFSIYGTEVQEADDQSIPDDVREK
                     LLHFARAGLAVATLRGKSYLSIGSVSMGIAGSIVNQQFFQEYLGMRNEYVDMTEIKRR
                     LDRHIYDAEEFKLAMSWVKTYCKEGIDVNAPENQRSPEEREKLWEDVVKMTIIARDLM
                     VGNPRLAELGYSEEALGHNAIAAGFQGQRQWTDHLPNGDFMEATLNSTYDWNGVRAPY
                     IMATENDSLNGVNMLFGNLLTGQAQIFADVRTYWSEDSVERVTGWRPESGFIHLINSG
                     SAALDGTGQHTDRAGKPTIKPAWEVTEEDGKRCLENTCWCPAVHEYFRGGLSSQFLTK
                     GGMPFTMHRINLIKGIGPVLQIAEGWSIDLPENVHDILNKRANETWPTTWFVPRLTGK
                     GAFTDVYSVMANWGANHCVATFGHVGADLITLASMLRIPVCVHNVEDKDVFRPSAWNG
                     FGQDKEGQDYRACANFGPLYK"
     gene            5892..7325
                     /gene="fucK"
                     /locus_tag="PXD18_000770"
     CDS             5892..7325
                     /gene="fucK"
                     /locus_tag="PXD18_000770"
                     /EC_number="2.7.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculokinase"
                     /protein_id="HDL6301223.1"
                     /translation="MPISLIFDCGATNLRTIAINQAGEIVAAHHLPNNTQPDVESPEF
                     HIWDIEEIWSKLMTCAKQTLSQLSEQQRQEIVGISVTTFGVDGALFDKNGKQLYPIIS
                     WKCPRTLPIMENLANYLDVEALYQRNGVGHYSFNTLFKLLWLKENKPEIYQQAESFLF
                     ISSILTYLLTGVQTTDRTMAGTSMMTNIENDSWDKTVLDLLGLTENHFPPMKSAGEVV
                     GTLKGEISQELGLSGQIPVISCGHDTQFAIFGSGAGYNQPVLSSGTWEILMVRTPKAK
                     PQWQFVQNGLTIEFDSQSGYFNPGVQWVASGVMEWFGKRFFSDIANTEHYYRTMIEEA
                     AEVPAGSNGVKLVGNFDGTTAKTGSIIGLSMHITRGEIYRAGLEYMAHRLKEGLDVLQ
                     EVGHFNAESLICVGGGSKNALWNQIRADVLNRPIDVVDFPESTVLGAAMFTFTGAGVF
                     ENPNAAQQAVKPNVKRVEPSSNSQFYK"
     gene            7400..7831
                     /gene="fucU"
                     /locus_tag="PXD18_000771"
     CDS             7400..7831
                     /gene="fucU"
                     /locus_tag="PXD18_000771"
                     /EC_number="5.1.3.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose mutarotase"
                     /protein_id="HDL6301224.1"
                     /translation="MLKGIHPAISPDLLKVLAEMGHGDELVLSDAHFPAHSIHQNVIR
                     ADGLSVATLLEGISALFEFDQYVEAPLAMMQAVKGDTLDPSVEERYLNAIKKVNGTAP
                     KIERVERFAFYDRAKNAYAVVITGELAKYGNIIIKKGVTPV"
     gene            7891..8544
                     /locus_tag="PXD18_000772"
     CDS             7891..8544
                     /locus_tag="PXD18_000772"
                     /EC_number="4.1.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculose-phosphate aldolase"
                     /protein_id="HDL6301225.1"
                     /translation="MDRKILARQIIDTCLEMTRIGLNQGTAGNVSVRYKDGMLITPTG
                     TPYEQMTEDSIVFVDGNGKHEEGKLPSSEWQFHLAVYEARPELNAVVHNHAKNCAAVS
                     ILGEPIPAIHYMIACTGTNHIPCVPYAPFGTHQLADYVREGIKHSKAILLAHHGLITA
                     DKTLEKALGIAHEVEVIAEWYLKLLATGKPIPTLNKEQMDIVLGKFKSYGSWVESEQ"
     gene            8606..10135
                     /locus_tag="PXD18_000773"
     CDS             8606..10135
                     /locus_tag="PXD18_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL6301226.1"
                     /translation="MQNEVILTMKNISKSFAGVNALKGVELTLRKGEVHALMGENGAG
                     KSTLMKCLLGVYQADEGEIIYKGQPVRFESVLEAQKAGISMIFQELNLIPHLTVAENI
                     FFAREPLKHGLVDKDKMVEESAKLLNFFEIDVDPNDEVRMLSVAKQQMVEIAKALSFD
                     VEVLIMDEPTSALTEKEIDKLFELVDRLRAKGVSIVYISHRMEELKRICNHITIFRDG
                     TYVSNHKFNEITMDEIITKMVGCSLDNHFPPKTAVVTNDIILSIMNAERKGVFEPLNF
                     DLRKGEILGITGLVGAKRTELARAIFGADPLDSGEIFVHENKVSIKDPSDAIKAGIAY
                     LSEDRKLNGVAVRMSIRENITMASMDKVANQIGVISYDEEEKASKTFIDKMEIKTPTI
                     EQKVQNLSGGNQQKVVIGKWLFREAKVMIFDEPTRGIDVGAKYAIYQLLDELAANGVG
                     VIVISSELPEVLGVSDRIIVMREGRMTGMLETKKTNQEEIMHYATGVKNMFAREYGVE
                     K"
     gene            10132..11130
                     /locus_tag="PXD18_000774"
     CDS             10132..11130
                     /locus_tag="PXD18_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6301227.1"
                     /translation="MNEKQKEMLRKMAALAGLVLLIIFFSVTNEYFFTSNNIMTVGLQ
                     TSTIALIGIGATCVILTGGIDLSTGSVVALSGVAAAMIVNAGVPVPLGMILGILVGGI
                     CGLINGILVTRMKLPPFIATLGMMMVARGLALYVTNAAPVSGMPESFANLGNGALFKI
                     VEEGANGLPKVVFAGIPYPVIIMIFITVLFTFALSKLKVGRYLYAIGSNEEAARLSGI
                     KTNIVKIYAYVASGLLSGLTGVILASRLVTAQPNGGVSYELDAIASAVVGGTSLMGGV
                     GTIPGTLIGSFIIGVLRNGLNMNGVSSFVQMIVIGLVIIVAVSLDQLRQSKKAGKK"
     gene            11154..12101
                     /locus_tag="PXD18_000775"
     CDS             11154..12101
                     /locus_tag="PXD18_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6301228.1"
                     /translation="MKKSALFTATLFGLSTLFAGSAMAKSDEIAVIVKSANSTFWQNV
                     RKGAETAGKDIGGQYKVTFQGPEAETAIDAQVNMVDNAVNRGVAGIVLAASDPVALVP
                     AVKKAYESGIPVVLIDSGINSDGKYYQSFLATDNRAAGKLAAEKLLAKVKGGKVAVMS
                     FTQGAASAIERTGGFIDEIKAKADYKLVGPYYSDSDMTKALNQTEDVLGSNPDLAAIF
                     GANEPTAVGMARAVKQKGFAGKIVAVGFDGNSDLQNFVRDGTLDGIVVQSSYQMGYKG
                     VDTIGKLIKGEKVEKVIDTGVVYVTKENIDSEEAKGVLY"
     gene            12157..12408
                     /locus_tag="PXD18_000776"
     CDS             12157..12408
                     /locus_tag="PXD18_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIB"
                     /protein_id="HDL6301229.1"
                     /translation="MSNTLTDKALVVIAALGGRENIVDVYACITRLRVEVKNTDIVEW
                     DKIKSVGALGVVTSGSVIQSIFGSDAEAYRDEIKRILNI"
     gene            12537..13688
                     /gene="fucO"
                     /locus_tag="PXD18_000777"
     CDS             12537..13688
                     /gene="fucO"
                     /locus_tag="PXD18_000777"
                     /EC_number="1.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactaldehyde reductase"
                     /protein_id="HDL6301230.1"
                     /translation="MANRLILNETSYHGKGAIQNIVHEVTSRSFKKALVVTDKDLIKF
                     NVAQKVTALLDAAGLPYEIFDEVKANPAVDVIKAGVAKFKASSADYLIAIGGGSPIDS
                     AKAIGIIINNPEFSDVLSLEGVAPTHQKCVPIIAIPTTAGTAAEVTINYVITDEAKKR
                     KFVCVDVHDVPAVALVDPDMMESMPKSLAAATGMDALTHAIEGYITKAAWELTDALHL
                     KAIELIGRSLRGAVEKNPKDVEAMALGQYVAGMGFSNVGLGAVHSMAHPLSAYYDTPH
                     GIANAVLLPYVMEFNKNYTGEKYREIARAMGVKGVDEMSQEEYRNAAIAAVQQLSQDV
                     GIPPKLHQIGVKEADLAALSVDAFNDVCTGGNPRDCTAEELLEVYRIAY"
     gene            13955..15400
                     /gene="aldA"
                     /locus_tag="PXD18_000778"
     CDS             13955..15400
                     /gene="aldA"
                     /locus_tag="PXD18_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HDL6301231.1"
                     /translation="MVKQHKMYINGEFVPALDGRTLAVYNPATEKAISEVPRGGADDA
                     KIAIDAAEAAQEAWERLPAIERGKYLRQIAVGIRERADEIARTISEEMGKTLSLATVE
                     VHFTADYLDYMAEWARRYEGEIIQSDRPNEHIFLYKKAIGVTTGILPWNFPFFLIARK
                     AAPALVTGNTIVIKPSEDAPNNAILFSEIVHQVGLPKGVFNVVTGYGNEVGPELSGNE
                     KIGMVSFTGSQFAGQKVMEAASKNIIKVNLELGGKAPAIVLDDADLELAATAVVNSRI
                     INSGQVCNCAERIYVQSSIKEQFVQKLVEKMQAVKYGNPLEQQDIDMGPMVNEKGLHK
                     VQEMVTHALHQGGNLVLGGNVVEGTGYYFEPTIIDNVDNSMDIMRHEIFGPVIPVATF
                     DTIDEAIRLANDCEYGLTSSVYTQNINKAMKVISRLKFGETYVNRENFEAMQGYHAGW
                     RKSGIGGADGKHGLEEYLQTQVVYLQFDDKV"
     gene            15656..16303
                     /locus_tag="PXD18_000779"
     CDS             15656..16303
                     /locus_tag="PXD18_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1440 domain-containing protein"
                     /protein_id="HDL6301232.1"
                     /translation="MSIFQQTNPNRRRYGLAVFIGIIAGIISAFVKWGAEHPFPPRSP
                     IDLFTAACPQPVLDAMNAAADQVAAKTIALQECSRAFLNPPHVFLRDYIGIDPTEAAF
                     TFADHAFNWIGVTHMIFSLVFAIGYCIVAEIFPKIKFWQGIGAGIIANICVHYITFPA
                     LGLTPPVAEWPLYEHISELVGHIFWFWTIEVIRRDLRNRITREPDAEVPLDQPFR"
     gene            complement(16436..17812)
                     /gene="trkA"
                     /locus_tag="PXD18_000780"
     CDS             complement(16436..17812)
                     /gene="trkA"
                     /locus_tag="PXD18_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HDL6301233.1"
                     /translation="MKVIILGAGQVGSTLAENLVSEDNDIVLVDNDPTRLDKLKDKHD
                     LQVIRGEYASPQTLRDAGAGDADLLVAVTNSDEVNMIACQIAYTLFNVPTKIARIRSA
                     DYVRERERLFNDDVLPIDHIIAPEILVKEDILRLIHYPGALQITHFADELVSIVNVKA
                     YYGGPLVGYPISALRDHLPHIDARVVAIFRQDKAIVPQGSTIIEAGDEVFFICATQHI
                     RAVMSELQRLDRPHKRIMIVGGGSIGSSLARDLEDQYRVKIIERNPVRAEKLAEKLSK
                     TMVLTGDASDEELLFEEHIENIDLFLAVTSDDEANIMSALLAKRLGAKKVIILVQRPA
                     YLHLIQGGTIDIAISPQQATISALASYVRKGDILQVSSLKLGVAGAVEIIAHGDATTS
                     KVVGRQIRELKLPQGAIVGAVVRGEEVIIAHKSTMIAENDRVIIFVNDKKQIDEIEKL
                     FQLGVFFL"
     gene            complement(17812..19143)
                     /gene="rsmB"
                     /locus_tag="PXD18_000781"
     CDS             complement(17812..19143)
                     /gene="rsmB"
                     /locus_tag="PXD18_000781"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HDL6301234.1"
                     /translation="MKKQSFKALSSRAISATIILQVLDQGKSLSTLIPDAQKQLEPKD
                     LPLVQEITFGVCRVLPRLESIIKLLVEKPLKGKTRLVHCLLLVGLYQLLYMRVPAHAA
                     VDEVVNATKTLKLDSFRALTNGVLRRFLREQEEILAKVDKHWQTLHPEWLVNKLKKAY
                     PNWREIVEANNQRPPMWIRVNQQHIKTNDYAALISELVEPEFAKNSENPTACVPKCAL
                     LLERAVNVNQLPHFEQGWATVQDAHAQWSAELLGAENGETVLDACAAPGGKTTHILEK
                     APKAKVMALDIEESRLSRVRENLVRLGQIAQVICGDASKPEEWLEEGVLFDRILLDAP
                     CSATGVIRRHPDIKWLRKEGDIAELATLQGEILKALWQRLKPNGILLYATCSVLPQEN
                     SEQIQRFLQDTPNAKQLEIDFNGEKVLEKQFFPQPNGGDGFFYAKLQKVAE"
     gene            complement(19195..19620)
                     /locus_tag="PXD18_000782"
     CDS             complement(19195..19620)
                     /locus_tag="PXD18_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDL6301235.1"
                     /translation="MYNKLLIAIDLADLKSAKYVVDTALQMTAKNPNAVYRVVSIIEP
                     VDNSLISAFLPKNFDKEVVAEANQKLHEFTKNHFPEGSKVQHIVAYGTIYEEICRIAD
                     EKSVDLIMMLASSKPNAKGLSSNTVKVARNTTKPILVLR"
     gene            complement(19713..22361)
                     /locus_tag="PXD18_000783"
     CDS             complement(19713..22361)
                     /locus_tag="PXD18_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter permease"
                     /protein_id="HDL6301236.1"
                     /translation="MSVESKVDYDDLQDMVASNDSGGRTPSGLAKKAIVYVAILWSVF
                     QIYYASPLPFVFQEWLTHAGINLNVVVDDTKARSIHLAFAMFLAFLSYPAFASSPKHH
                     IPKIDWVFAIVGAGLALYYIFFYEGLVKRFGAPNTQDIIAGCLGILLVLEATRRSLGL
                     PLVIIAIVFLIYNFFGQYFPADWIVSHRSGSLSQIINQQWITTEGVFGVALGVSTKYV
                     FLFVLFGALLDKAGAGNYFIKTAFAYLGHLRGGPAKAAVVSSALTGLISGSSIANVVT
                     TGTFTIPMMKRVGFTKEKAGAVEVASSVNGQIMPPVMGAAAFLMIEYVNMPYSQLITH
                     AFLPALISYIALVYIVHLEACKMNLQGLPRAEEPSPILVFLLRTVASILVIVGLAIGV
                     YYGLGWIRDVAEDYAFMIVCAFLGLWYLLAIRRVASYPDLEADDPNSEIVSLPKRKPT
                     VNAGLHYLIPVVVLLWCLMVEMLSPGLSAFWGTITLIFIQLTQRPLLNFFRKESVTKE
                     IIKQGVRDVVDSLEAGGRNMTGIALATATAGIIVGVVALTGFGVQLSSVIELLSMGNI
                     VLMLILVAVFSLILGMGLPTTANYIVVSSLMATVIMEVGRQNGLIVPLIAVHLFVFYF
                     GIMADVTPPVGLASFAAAAISGGSPINTGMVAFKYSLRTVILPFLFIFNTDLLLIDLR
                     YPGHGWVVFITATVGVLAFTSATMQYIVTKNKWWETALLVVAAFALFRPGFFMDRIYP
                     SERHIEPVQFEEQLLASKVGQNVTLKVEGLNPYGKEIEFYAQLPVPEGATGEERLKNL
                     GLTLIQTDEKIKVDGVETPKVVIDMVEMDSPAAKAGLNWDQTIHYIAVPQDAPSKDWI
                     FIPALLLVFGIVANQRRRVKKQCVIA"
     gene            complement(22563..23525)
                     /locus_tag="PXD18_000784"
     CDS             complement(22563..23525)
                     /locus_tag="PXD18_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HDL6301237.1"
                     /translation="MKKLVKLSFLASLVMGTASVQAAETFVTIGTGGQTGVYYVVGQS
                     ICQLVNRDSAKTGLKCNAPSTGASVANLNAIAAKEMDMGIAQSDWQYHAYNGSSSFEG
                     KKNDKIRAIFSLHPEPFTVMARTDSGIKSFDDLKAKRVNVGDPGSGTRATMNVILAAK
                     GWTDKDFKVASELKPAEMASVMCDNNLDAITYNVGHPNGALKEAAASCDAKLVPVTGP
                     EIDKLVADHSYYAKATIPGGLYKGSDEPTETFGVYATLVTSADVDADKVYNVTKAVFD
                     NFDRFKRLHPAFEHLKQEEMIKNALSAPLHEGAIRYYKEKGWIK"
     gene            complement(23709..25556)
                     /gene="selB"
                     /locus_tag="PXD18_000785"
     CDS             complement(23709..25556)
                     /gene="selB"
                     /locus_tag="PXD18_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HDL6301238.1"
                     /translation="MIICTAGHVDHGKTSLLQALTGTNTAHLPEEQKRGLTIDLGYAY
                     LPIENDILGFIDVPGHQRFLSNMLAGLGGIQHALLVISAEEGIKPQTEEHLDILHLLN
                     FQHIMIVITKADRAEETQISHLIEQVKTSYPFLAEAKTFVTSAKTQQGIEELKAHLIQ
                     LNQQHTQTHKPFRYAIDRVFNVKGAGLVVTGTTVAGKVSVGSELFLSNGKKVRVKAIH
                     AQNTPSETGVAGQRLALNIANVEKEEIKRGDWITELEPKFATDRITVQLTANQAFKEN
                     SIVHLYHFASHITGKLNLLEGQQAVKNQQFFAEVILDEPLHIAVGDKLIIRSGDDSLT
                     LAGAEVLEIHSPKRHKRTEARLALVKNLAKTTACNDFATRLDLYLQNRAMDLSLLLWA
                     EQCFAEDIAKLGFDVSSKWLFNSDFKAQAQQRVLEKMAEYHLQHQDQIGVTKARLYRI
                     ALLDLPENLANQFIEDLVEQKALVNSRGWLHLPEHRIELNADELQIWQQIRPLFEATN
                     QALWVRDIASQLSIDETQMRNLLYKVGKLGYLIPIVKDRFLLSEQIGQFATLIKDFIA
                     QNGSISVNQLRDELQYGRKLTVQLIEYFDRSGFLRRKGDVHLLRDSETF"
     gene            complement(25566..25862)
                     /locus_tag="PXD18_000786"
     CDS             complement(25566..25862)
                     /locus_tag="PXD18_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6301239.1"
                     /translation="MMKFDYNIVWLQKAEIKLFYQADYILQQSQNPIIAEQFYDAIKS
                     EVDKLSFTADVYRLRKKKEIPILNGKYQVKFLIGQENVYIVDFKSARQNSYSFL"
     gene            complement(25859..26035)
                     /locus_tag="PXD18_000787"
     CDS             complement(25859..26035)
                     /locus_tag="PXD18_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301240.1"
                     /translation="MELILAQDLAKLRTDKPQSFYTNDELDLLHQLENGLIETKSHAQ
                     VMEDLRKKLGITEK"
     gene            complement(26104..26736)
                     /gene="pdxH"
                     /locus_tag="PXD18_000788"
     CDS             complement(26104..26736)
                     /gene="pdxH"
                     /locus_tag="PXD18_000788"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005575912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HDL6301241.1"
                     /translation="MDLHHIREDYTKKVLSIRDCHSNPITQFEQWLSEAINAKVNEPT
                     AMNIATVAANGRPSSRMVLLKEVNSQGFVFFTNYQSRKGWEIADNPFGCLTFFWAELQ
                     RQVRIEGKIAKIPEAESDAYFDSRPYTSRLGAWASEQSQPIENYKALLLKSAQFALKY
                     PLSVPRPPHWGGYILIPDSIELWQGRSSRLHDRIHYWLENNEWKKERLSP"
     gene            complement(26794..28176)
                     /locus_tag="PXD18_000789"
     CDS             complement(26794..28176)
                     /locus_tag="PXD18_000789"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HDL6301242.1"
                     /translation="MQQLFRQIPSLDLLLKKPQAVELCQKFAYSSVAEQARSLLTQAR
                     QFISQQQALPDFIADENLFFIRLEQKVQALSEVKIRSVFNLTGTVLHTNLGRGLWSEK
                     AIQAATNAMRNNVALEFDIEAGKRSHRDNYISELLQILTGAEAACIVNNNAAAVLLML
                     ATFAQGKEVIVSRGELVEIGGAFRIPDIMAQAGCKLVEVGTTNRTHLKDYRNAITENT
                     AFLMKVHTSNYHIEGFTSSVSEEELVALGKEFNLPVITDLGSGSLTDMQALNLPAEPK
                     VQQKVAAGVDLVSFSGDKLLGGPQAGIIVGSQAMISQLQQHPLKRVLRCDKVILSALE
                     ATLRHYLFPEQLTDNLPTLHLLTQPLETLQHKAERLKQALHKRLNSAYILQIELSLAQ
                     IGSGALPTETLPSVAVTISAEKQSDLIALEQQFKTYPSPIIGRFAQQKFWLDLRSVAE
                     FDKLIEMLEY"
     gene            28244..28338
                     /locus_tag="PXD18_000790"
     tRNA            28244..28338
                     /locus_tag="PXD18_000790"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:28278..28280,aa:Sec,seq:tca)
BASE COUNT         8294 a         6127 c         5937 g         8079 t
ORIGIN      
        1 tatatcttaa taggagcaga ttatgtttaa agagaaaggc tatgatgaat tcctagcaga
       61 aaaaattcgc cttggcttag aagatatgca atcaggtaat ggtctttcac tcgatgaatc
      121 aaaagcacga accaaacaac tgattgaacg taaagcaaga gaactcgcaa actttgaaca
      181 agagaatatc atttatggct aaaacattac gaattagcag tagagctcaa aatgatattg
      241 aagaaatttt agcgagcgta attgaatata ctggttttga aagtagtgga attcgcttac
      301 aagaagatat ttaccaaaaa tttgagacta tcgcttatat gccctctgcg gctggacgtt
      361 taagagaaga tggcacaaga gaagcattca ctaggcgtta tcgtattgtt tataccgaat
      421 tagaaaatga agtgtggatt attaccatta ttcatagtag cagactttat ccacgcattt
      481 aaataacaaa cgactaaaat agtcggtttt ttatttgcaa aaaattaata aaatatcacc
      541 gcttgtaagc tccataaaaa aaagcccgat tgtaacatcg ggcgttttag tctgaattta
      601 agtcagatta gaatgtgtag ttcacacctg cacggaattc acgtccacga gctgataatt
      661 gaccacgctg accgtgtgcg ttgtattttt tattcgccac gttatccact gcgaagttta
      721 cattcacgct atcatcttta agtggtttcc agtttaaggt gatatcagtt acattgtagc
      781 cgtctttgcc tgtaccggta tttgtttgta atgttccgcc cgtaacgaag aaattatctt
      841 caggtttcac tttctcaaca atacggtggt gtacgccaac ctctaaattt ggttgttcaa
      901 agcgatagct taaagaagct gtccaagtac gaccgatagc tgaggcgtat tctgggttag
      961 tacttaataa tggtttttct tcccgcttac cagtttgtct gtttacttcc caaatagttg
     1021 gtgagtagaa acgcggtttg ctgtgtgcaa caccaatacg agcagtaaaa ccaccattat
     1081 ggtaacctgc atttaactca taaccacggt ttttaatttt acctaggttc ataattaact
     1141 cattattagg attatggcta tcacgaccac cacctaatgc atcttttata tcttgccaga
     1201 aatagctacc atcaaaactg aatgtaccat tgttatagtt gaaaccgatt tcagtattac
     1261 gagctttctc cgctttagta ttgctaccaa tactaacgat ttttctattt ccgtgagccg
     1321 ttagtgcatc gtataaacga gggctacgag ttgcatagtt gtggcttgca cttaagctta
     1381 aatgttcaat tggctcatag ataagcccaa cgcttgggct gaatgcacca ttactacgct
     1441 ctttaccatc cattgctttg aatttgaagt ggtcgtaacg tacaccggta gttaaagtta
     1501 ctttatctac tggagcagta attgcttcaa catacacgcc ggtatcggtt ttctcttggt
     1561 ttttcacaag agggttaaat ttagtgtgtg gtttagcttc ttggtggcga tagttcacac
     1621 cgtattttaa taatacattt tcgtgaaggg cagaatcaaa gtttacgttt gcaccgtggg
     1681 ttactatttt agttttggtt gcataatcta caccaccagc ataaccatta cctgtttcat
     1741 tctcagacca acgaccttgt actaactgat acacgttagc tgttgcttct tgagcaaaac
     1801 ctaagttttt accagtccat tctaagttag ttctttgaac cgtaattcta cggttagctg
     1861 gagcttggcg ttctacagtt aagcggttgt acggagaaac ctttgtgccg ttaggtgcta
     1921 catcaaattc ttcacgcact aaacgctgac cttcatttcg ctcacttgaa tggcttaata
     1981 caaaacggtg atctcccaat gttgcaccta atttagctaa aaagctggtt ttatctagtg
     2041 cactatacgg aacacggttt gtgccgaatt ggtttacgta atctttaccg cctttatagt
     2101 cgcgatctct cacaagatta cctgagacta aagcatcaaa gatttcgcct ttaccatata
     2161 aggttgcatt gaaattgtga gcgtggtttg tgctgaagcc agtacctaat tttgcaccga
     2221 agtttttatc gctgtttttt aataaatcta atgcatcaac ggttttagca attactgcac
     2281 cattagtttg accaataccg gctgaagcac tgcctgcacc tttttgtaca gaaacaattt
     2341 tcaccaatgc cggatctaac atatgacgac cttggtgata caaaatttgg ctatctgagt
     2401 aagtgttatc tacttttaca tcaattgagt tttgacccat accacgaata tagagatatt
     2461 gtgatgtacc gttaccacca cctaagctaa ttgccggctc atcttttaat aaaccacgca
     2521 aatcggtttg ggtgctttca tcttttttct tagttgttac cacattgctt tgtactttta
     2581 aaccttgatt atctgttacg gtaacagtat ctaatactac tgcatctgtt gaagcagttt
     2641 gagccactgc attagcagca agtacgctca ataccgcagc agaaacaggg agcaatttga
     2701 agcttttcat tttatttata ttccttaggt aaattattta agaggattat ctgtttgata
     2761 ttaaaaataa ttctcaacac caaacgttcg caaattttac agagataaaa atgattgtca
     2821 attagtctga aatgaaattt cacaaaatat attacaaatt ttacaaaaag ttccctaaat
     2881 ttaaccgctt gcaacacaaa atgtgatcgc cttctaaaaa tcaaatttgc ttgctcgaca
     2941 gtaacgctac aagcggttaa atttggagaa aaatttacaa aaaggataga ttatgcagct
     3001 gcgacacaaa cagataatgg aatatataca acagtttgat gaagctaacg ttcaagaatt
     3061 ggcggaacat tgtggggttt cgattgaaac tatccgccga gatttaaata agctagataa
     3121 agatggatta ttacatcgca ctcacggtgg agctgtgagc cataaaaagc gagatattgg
     3181 tcgctcattt accacccgac aacggctgaa cagtgaggcg aaacgcagta tcgcagaaaa
     3241 tgtgttggaa tatttacaac cagaatcggt gattgcttta gatgccagct caacctcttg
     3301 gaatgtggca cagcgtattc caaatattcc ttgcaccgtt gtcagcagtt caatgcggat
     3361 tatctacagc ctttcacaca aaccgcacat taaaacgatt gccaccggtg gtatttattc
     3421 cgaaaaatac gatgccttct atggtccatt atccgagcag ttactgaccc gtttaaaaat
     3481 tgatcttgcc attctttctt gtacaggcat tgccgatggg gcgatttggg aatcaaatga
     3541 aattaatatt tcccttaaac gtaaattaat tgcgaacagt aaacaggttt ttttattagc
     3601 cgatcacagt aaatttgagc gtaaagactt gtttcgtatc gaagatttat cttgcattga
     3661 taaattattt atcaaccaac ccccaccgga ctttctcaaa aattattgct tagcacatca
     3721 aattgaaatc attatttagt gatttctgcc cgattttatt cagaaataaa acaaatcggg
     3781 cattcttttt tcactcattt ttaccaaaat cccccatttt ttgtgatcgc actcacaaaa
     3841 tttaaactaa attcgcattt ttcttcataa ctcatattgc gtatgcataa taaattcaat
     3901 cgcaaatttt tttaaccaat cgggagaact atttatgaca acgttgaaat ctacccctgt
     3961 aaaaattggt atccgcccaa ccattgacgg tcgccgttta ggagtgcgtg aatcacttga
     4021 agatcaaaca atgaatatgg caaaagccgt tgcacaatta attcaatctg aagtccgcca
     4081 cccaaatggt gatttcgttg aatgtgtgat tgctgattcc accatcggtg gtgttgccga
     4141 agctgcggct tgtgcagaaa aattcaaacg tgaaaatgtc ggagcggtga ttaccgtaac
     4201 cccttgctgg tgctacggtt ctgaaaccat tgatatggac ccacatatgc cgaaagccat
     4261 ttggggcttt aacggaacag aacgcccagg tgcagtttat ttagctgctg ctttagcagg
     4321 tcatagccaa ttaggtttac cggcattctc catttatggc acagaagtac aagaagctga
     4381 cgatcaatct attccagacg atgtgcgtga aaaattactc cactttgccc gtgccggctt
     4441 agcagtggca accttacgag gaaaatcata tttatctatc ggctctgttt caatgggtat
     4501 tgccggttct atcgtaaacc aacaattctt ccaagaatat ttgggtatgc gtaacgaata
     4561 tgtggatatg accgaaatta aacgccgttt agatcgccat atttacgatg ccgaagaatt
     4621 taaattagca atgagctggg tgaaaaccta ttgcaaagaa ggtattgatg tcaacgcacc
     4681 ggaaaatcaa cgcagcccgg aagagcgtga aaaactctgg gaagacgtgg tgaaaatgac
     4741 cattattgcc cgtgatttaa tggtgggtaa tcctcgctta gcagagctag gctatagtga
     4801 agaagcctta gggcataatg cgattgctgc cggtttccaa gggcaacgcc aatggacaga
     4861 ccatttgcca aacggcgatt ttatggaagc taccttgaat tcgacctatg actggaacgg
     4921 cgttcgcgca ccatacatta tggcaactga aaacgacagc ttaaatggcg tgaatatgtt
     4981 gttcggtaac ttattaaccg gtcaggcaca aatctttgcc gatgtgcgga catactggag
     5041 cgaagactcg gtagaacgtg tcaccggctg gcgtccggaa agcggtttta tccacttaat
     5101 caactccggc tctgcggcgt tagacggaac aggtcagcat accgatagag caggcaaacc
     5161 aactattaaa ccggcttggg aagtgactga agaagacggt aaacgttgtt tagaaaacac
     5221 ctgttggtgt ccggcagttc acgaatattt ccgtggtggt ttatcttccc aattcttaac
     5281 caaaggtgga atgccgttta cgatgcaccg tatcaacctg atcaaaggta tcgggccggt
     5341 tttacaaatt gccgaaggtt ggtctatcga cttgccggaa aatgtacacg acattttaaa
     5401 caaacgcgcc aatgaaacct ggccgaccac ttggttcgta cctcgcttaa ccggaaaagg
     5461 cgcatttacc gatgtgtata gcgtaatggc gaactggggt gcaaaccact gtgtggcaac
     5521 cttcggacac gttggggcag acttaattac cctcgcctca atgctccgca ttccggtttg
     5581 tgtgcacaat gtggaagata aagacgtatt ccgcccaagt gcgtggaacg gtttcggtca
     5641 agacaaagaa ggtcaagact accgtgcttg tgctaacttc ggaccattat ataaataata
     5701 cacaatcacc ctctcccctt gtgggagagg gacagccaag caattcgttc agaattgaat
     5761 ggcagggaga gggctacaag cggtcgcttt tctctcaaaa tttacaaatc cctctctctg
     5821 attaaattgc taaacgcaat ttaatctatc tctctaaaag ggagatatta ggataagtaa
     5881 aggagataac aatgccaatt tctcttattt tcgactgtgg tgccaccaac ctccgtacga
     5941 ttgcgattaa tcaagcgggt gaaattgtgg cagcccatca tctaccgaat aacacacaac
     6001 cagatgtgga aagcccagaa tttcatattt gggatattga agagatctgg tcgaaattaa
     6061 tgacctgtgc caaacagacg ctttctcaac tttcagaaca acaacggcaa gagattgttg
     6121 ggatttcagt aaccaccttt ggcgtggacg gtgcattatt tgacaaaaac ggcaagcagc
     6181 tttatccgat catttcttgg aaatgcccga gaaccctacc gattatggaa aaccttgcca
     6241 attatcttga tgttgaggcg ttatatcaac gtaatggcgt tggacattat agtttcaaca
     6301 ccttattcaa attattgtgg ttaaaagaga acaaaccaga aatttatcaa caagctgaga
     6361 gtttcttatt catctcatct attttgactt accttcttac aggcgtgcaa acaaccgacc
     6421 gcacaatggc gggaacgtca atgatgacaa acatcgaaaa cgattcgtgg gataaaacag
     6481 ttttagattt attaggctta accgaaaacc attttcctcc aatgaaaagt gcaggagaag
     6541 ttgtgggaac attaaaagga gaaatttccc aagagttagg tttaagcggt caaattccag
     6601 taatttcttg cggacacgat actcaatttg ccatttttgg ctcaggagct ggctataacc
     6661 aacctgtgtt aagttcaggc acttgggaaa ttttaatggt tcgtacccca aaagcaaaac
     6721 cacaatggca attcgttcaa aacggcttaa ccattgagtt tgatagccaa tctggttatt
     6781 tcaacccagg tgtgcagtgg gtagcttcag gtgtgatgga gtggtttggc aaacgtttct
     6841 tctctgatat agccaatact gaacattact accgcacaat gattgaagaa gcggcagaag
     6901 tgcctgctgg ctcaaacggt gtgaaattag tcggcaattt tgatggcaca acagctaaaa
     6961 caggttcaat tatcggctta tctatgcaca tcactcgtgg cgaaatttac cgtgcaggct
     7021 tggaatatat ggctcatcgt ctaaaagaag ggttagatgt attacaagaa gtcggtcatt
     7081 ttaatgctga gagtttgatt tgtgtgggag gtggttctaa aaacgcttta tggaatcaaa
     7141 ttcgagccga tgtcttaaat agaccgattg atgtagtgga tttccctgaa agtaccgtat
     7201 taggcgcggc aatgtttact tttacaggtg ctggtgtatt tgaaaatcca aatgcggctc
     7261 aacaggcagt gaagccaaat gtgaaacggg ttgagccatc gtcaaatagt caattttata
     7321 aataaagttt ctcccctctc tctgatttga ggttcattca gaacatcaaa tcagagagag
     7381 ggtaaaaaag gagttcaaaa tgttaaaagg tattcacccg gcaatttctc cagatttatt
     7441 aaaagtctta gccgaaatgg ggcacggcga tgaattagtg ctttctgatg cacacttccc
     7501 tgctcactct attcatcaaa acgtcattcg tgcagatggc ttaagtgttg ccaccttatt
     7561 agaaggcatt tctgctctgt ttgaatttga ccaatacgtt gaagccccac ttgcaatgat
     7621 gcaagcagta aaaggcgaca cgctcgatcc aagcgttgaa gagcgttacc tcaatgcaat
     7681 taaaaaagta aacggaacag ccccgaaaat agagcgtgta gaacgcttcg ctttctatga
     7741 tagagccaaa aacgcttatg ccgttgtcat tacaggcgag ttagccaaat acggcaacat
     7801 tattatcaaa aaaggcgtaa caccggttta attacaagcg gttaaaaaag cagaattttt
     7861 tacaaatata aaattaaaag gagttcaaca atggacagaa aaatactggc gagacaaatc
     7921 attgatactt gtcttgaaat gacccgaatt gggttaaatc aaggtacagc aggcaatgtg
     7981 agcgtacgtt ataaagacgg tatgctcatt acgccaacag gtacacctta tgagcaaatg
     8041 accgaagatt ctatcgtctt tgttgatggc aacggcaaac acgaagaggg aaaactccct
     8101 tcaagtgagt ggcagttcca tttagcggtt tatgaggctc gccctgaatt aaatgcggta
     8161 gttcacaacc acgctaaaaa ctgtgccgca gtgtctattt taggtgaacc tatccctgcc
     8221 attcactata tgatcgcctg caccggcact aatcacattc cttgtgtacc ttatgccccg
     8281 ttcggcactc accaattagc cgactatgta cgtgaaggca ttaaacacag caaagcaatt
     8341 ttactcgctc accacggctt aatcaccgca gataaaaccc tcgaaaaagc cctcggcatc
     8401 gcccacgagg tggaagtgat cgcagaatgg tatttgaaac tgctcgctac aggaaaacct
     8461 atcccaacgc taaacaaaga acaaatggat atcgtactcg gaaaatttaa gtcctatggt
     8521 tcttgggtgg aaagcgaaca atagcctgcc ataaataaca tacaagcggt gatatttctt
     8581 aaaattttta caaacggagt gcagtatgca aaatgaagta atactcacga tgaaaaacat
     8641 cagtaaatcc tttgcggggg tcaatgcgtt aaaaggtgtt gagcttacgc tgcgtaaggg
     8701 cgaagttcac gcattaatgg gcgaaaacgg tgcaggtaaa tccaccttga tgaaatgctt
     8761 gctgggcgta tatcaagccg atgaaggtga aatcatatat aaaggtcagc ctgttcgctt
     8821 tgagtcggta ttagaggcac aaaaagcggg cattagtatg attttccaag aactgaacct
     8881 cattccccat ttaacggtgg cagagaatat tttcttcgcc cgtgagccac tcaaacacgg
     8941 tttagtggat aaagacaaaa tggtggaaga atcggctaaa ttgctgaatt tctttgagat
     9001 tgatgttgat ccaaacgatg aagtgagaat gttgtcggta gccaaacaac agatggtaga
     9061 aattgccaaa gccctttcat ttgatgtgga agtactgatt atggacgagc cgacctccgc
     9121 tcttaccgaa aaagagatcg ataaattatt tgaattggtc gatagactgc gtgccaaagg
     9181 ggtgagcatt gtctatattt ctcaccgaat ggaagaatta aaacgtatct gtaaccatat
     9241 tacgattttc cgtgatggca cctatgtatc taaccataaa ttcaatgaaa tcacgatgga
     9301 tgagatcatt accaaaatgg ttgggtgttc attggataac catttcccac caaaaaccgc
     9361 tgtggtgaca aacgacatta tcctctcgat tatgaatgct gaacgtaagg gagtgtttga
     9421 accattgaac tttgacttac gcaaaggaga aattctgggc attaccggct tggttggagc
     9481 aaaacgtact gaactggctc gagccatctt cggagcagac ccacttgata gcggtgagat
     9541 ttttgtgcac gagaacaaag tcagcattaa agatccgagt gatgcaatta aagccggtat
     9601 agcctatttg tcggaagacc gtaagctcaa tggtgttgca gtaagaatgt cgattcgtga
     9661 gaatatcacg atggcatcta tggataaagt tgccaatcaa ataggtgtga tttcttacga
     9721 tgaagaagaa aaagcctcaa aaactttcat cgacaaaatg gaaatcaaaa ccccaacgat
     9781 tgagcagaaa gttcaaaact taagtggtgg taaccaacaa aaagtggtaa ttggtaaatg
     9841 gttattccgt gaagcaaaag tgatgatttt tgatgagccg actcggggaa ttgatgtcgg
     9901 agcaaaatat gctatctatc aactgctcga tgagcttgct gccaatggcg tgggtgttat
     9961 cgtgatctct tccgaattgc ctgaagtctt gggagtttcc gaccgcatca ttgtaatgcg
    10021 tgaaggtaga atgacaggta tgctcgagac taaaaaaacc aaccaagaag aaattatgca
    10081 ttatgcaact ggtgttaaaa atatgtttgc tcgtgaatat ggggtggaaa aatgaatgaa
    10141 aaacaaaaag aaatgttaag aaaaatggct gcattggctg gcttagtact attaatcatc
    10201 tttttcagcg taaccaatga atacttcttt acctccaata acattatgac agtagggcta
    10261 caaacctcta ccattgcgtt aattggtatt ggggcaacct gtgtgatctt aaccggtgga
    10321 attgatttaa gtaccggttc agtagttgca ctctccggtg tggcagctgc aatgattgta
    10381 aatgccggtg tacccgtacc actaggaatg attttaggga ttttggtcgg cggtatttgt
    10441 ggcttaatca acggcatttt agtcaccaga atgaaattgc ctccgtttat tgctaccctc
    10501 ggtatgatga tggttgcccg tggtttagca ttgtatgtta ccaatgccgc accagtttcc
    10561 ggaatgcctg aatcctttgc caatctcggt aacggagcat tatttaaaat tgtggaagaa
    10621 ggggcaaacg gcttgccgaa agtggtattt gcaggtattc cttaccctgt gattattatg
    10681 atctttatta ccgtactatt cactttcgct ctctctaaac tgaaagtcgg acgctatctt
    10741 tacgcaattg gttctaacga agaagccgca cgcttatccg gcattaaaac caatattgtc
    10801 aaaatctatg cctatgttgc cagtggctta ctctctggtt taactggcgt tatccttgcc
    10861 tcccgcctcg tcaccgccca gccaaacggt ggggtctctt acgagctgga tgcgattgcc
    10921 agtgctgtgg tgggcggcac atcgcttatg ggcggtgtgg gtactatccc cggcacactc
    10981 atcgggtcat tcattatcgg ggtactccgt aatggtttga atatgaatgg cgtttcttca
    11041 tttgttcaaa tgattgtcat cgggcttgtg attatcgtgg cggtctctct cgaccagctc
    11101 cgccaatcca aaaaagccgg taaaaaataa tccactctta aaggagaatt aaaatgaaaa
    11161 aatcagcatt atttactgcg accctctttg gtttatcgac cttatttgca ggcagtgcaa
    11221 tggcaaaatc tgatgaaatc gctgtgattg tgaaatctgc caactctacc ttctggcaaa
    11281 acgtgcgtaa aggggctgaa actgccggca aagatattgg aggacaatac aaagtcacct
    11341 tccaagggcc ggaagccgaa acagcgattg acgcccaagt gaatatggtg gacaacgccg
    11401 taaaccgtgg cgtggcaggc atcgtactgg ctgcctcaga cccggtagca ttagtgccgg
    11461 cggtgaaaaa agcttatgag agtggcattc cggtggtgct tatcgattcc ggcatcaaca
    11521 gtgacggcaa atactaccaa tctttccttg ccaccgacaa ccgtgcagca ggtaaattag
    11581 cagcggaaaa actgcttgcc aaagtcaaag gcggcaaagt ggcagtgatg agctttaccc
    11641 aaggggcagc atcagcgatt gagcgtaccg gtggttttat tgacgaaatc aaagcaaaag
    11701 ccgattacaa actggtcggc ccgtactact ccgattcgga tatgaccaaa gcgttaaacc
    11761 aaaccgaaga cgtattaggt tctaaccctg atcttgcagc gatcttcggg gcgaacgaac
    11821 cgactgcggt aggaatggca cgagcggtga aacaaaaagg ctttgccggc aaaattgtag
    11881 cggtgggctt tgatggaaac tccgacctac aaaacttcgt gcgtgacgga acactagacg
    11941 gcatcgtggt gcaatcttcc taccaaatgg gctataaagg cgtggacacc atcggcaagc
    12001 tgattaaagg cgagaaagtc gaaaaagtga ttgataccgg ggtggtttat gtcacgaaag
    12061 aaaacattga tagcgaagaa gcgaaaggtg ttctttacta acattcaagt taaacggggt
    12121 ggggttgccc accctttcag ccgaaaggaa gccaatatgt caaataccct taccgataaa
    12181 gccttagtgg tgattgccgc acttggcggt cgagaaaata ttgtcgatgt ttacgcctgt
    12241 attacccgcc tacgtgtgga ggtgaaaaat accgacattg tggaatggga taaaattaaa
    12301 tctgtcggtg cgttaggcgt tgtgacctca ggctcagtta ttcaatctat ttttggtagc
    12361 gatgccgaag cctaccgtga tgaaatcaaa cgtattttga atatttagcc taagcacact
    12421 cacaacaaaa gaatcgcaac aagcggtgaa atttttatca aaatttgcaa aaaaatgacg
    12481 taatttgacc gcttgcaagt taatcgaatt gtttaacttt taagaaggaa aatagtatgg
    12541 caaatcgtct tatcctcaat gaaaccagtt accacggcaa aggagcaatc caaaatattg
    12601 ttcacgaagt gaccagccgg agtttcaaaa aagcccttgt ggtaacagac aaagacctga
    12661 tcaaatttaa cgttgcccaa aaagtcaccg ccttgcttga tgccgcaggc ttgccttatg
    12721 agattttcga tgaggtcaaa gccaacccgg cagtcgatgt gatcaaagcg ggggtcgcaa
    12781 aattcaaagc ctccagtgcc gattatttaa ttgcgattgg tggcggctca ccgattgata
    12841 gtgccaaagc gattggtatt atcatcaata accctgagtt tagcgatgta ctttcattgg
    12901 aaggtgtcgc cccaacccac caaaaatgtg tgccgattat cgccattcca actaccgcag
    12961 gtacagccgc agaagtcacg attaactatg tcattaccga tgaagcgaaa aaacgcaaat
    13021 ttgtgtgcgt ggacgttcac gatgtgccgg cagtggcgtt agtcgatcca gatatgatgg
    13081 aatctatgcc gaaaagcttg gctgccgcaa ccggtatgga cgctctcacc cacgccattg
    13141 aaggctacat taccaaagcg gcgtgggaat taaccgatgc tctacacctt aaagcgattg
    13201 agctgatcgg ccgttcattg cgtggtgcag tggagaaaaa tccgaaagat gtcgaggcaa
    13261 tggcattggg acaatatgtg gctggaatgg gcttctccaa cgttgggctt ggcgcggttc
    13321 acagtatggc acacccgctt tctgcctatt acgacacccc acacggcatt gccaacgcag
    13381 tattactgcc gtatgtgatg gaatttaata aaaattacac cggcgaaaaa taccgtgaaa
    13441 ttgcccgagc aatgggggta aaaggcgtag atgaaatgag ccaagaagag taccgcaacg
    13501 ccgccattgc tgccgtacaa cagctttcac aagatgtcgg cattccgcca aaactgcatc
    13561 aaatcggcgt taaagaagcc gatttagcgg cattatcggt cgatgccttt aatgatgtct
    13621 gcaccggtgg caacccgaga gattgtacgg ctgaggagct gttggaggta tatcggatcg
    13681 catactaagt tctatctttg ttaaatagac aagcggtgat tttttaataa aaatttgcaa
    13741 tttctgttaa aaaaatactg atagtcataa tgcccgattt ctcatattta tggaaaaatc
    13801 gggcattttc gttgcttttt tatcgccaag aaatgtgatt ttgttcacat ttatatctat
    13861 aaattaacaa aaataaaaca atttgtttgc aaaggcggtt cagttaccga atgatagtca
    13921 tcaacttcca ctgtggataa aaaaggagca actcatggtg aaacaacata aaatgtatat
    13981 taatggtgaa tttgtgcctg cgttagatgg tcgcacttta gcagtctata accctgccac
    14041 cgaaaaagct atctccgaag tccctcgtgg cggagctgat gatgccaaaa tcgctatcga
    14101 tgctgctgaa gccgcccaag aagcttggga acgtttacca gcgattgaac gaggaaaata
    14161 tttacgtcaa attgctgtgg ggattcgtga gcgtgccgat gaaattgctc gcactatttc
    14221 cgaagaaatg ggtaaaactc tgtccttagc aaccgttgag gtacatttta ccgctgacta
    14281 cttagactat atggcagaat gggcgagacg ttatgaaggg gaaattatcc aaagtgatcg
    14341 cccaaatgaa catattttcc tatacaaaaa agcgattggc gtcaccaccg gcattttacc
    14401 ttggaacttc ccgttcttcc tcattgcccg taaagcggct ccggcattag taacaggtaa
    14461 tactattgtg attaaaccga gtgaagatgc acctaataat gcgattctct tttcggaaat
    14521 cgtgcatcaa gtcggtttac ctaagggggt atttaatgtc gtcaccggct atggcaatga
    14581 agtcgggccg gaactttcag gcaatgaaaa aatcggtatg gtttccttta ccggtagcca
    14641 gtttgccgga caaaaagtga tggaagccgc cagcaagaat atcattaaag tcaatttgga
    14701 attgggcgga aaagcaccgg ctatcgtatt agacgatgca gatcttgagc ttgctgctac
    14761 cgctgtagta aattctcgaa tcatcaattc aggacaggtt tgtaactgtg cagaacgcat
    14821 ttatgtacag agttcaatta aagagcaatt tgtccaaaaa ttggtagaga aaatgcaagc
    14881 ggtgaaatat ggtaatccat tagaacaaca agacattgat atggggccga tggtaaatga
    14941 aaaaggcttg cataaagtgc aggaaatggt gacacacgca ctgcatcaag gaggtaatct
    15001 ggtattaggt ggtaacgtgg ttgaaggaac aggctactac tttgagccaa ctattatcga
    15061 caatgtagat aactctatgg atattatgcg tcacgaaatt tttggtccgg tcattccggt
    15121 tgcgacattt gataccattg atgaagcgat tcgcttagcc aatgattgtg aatatggctt
    15181 aacctcttcg gtttacacgc aaaatatcaa taaagcgatg aaagtaattt cccgcttaaa
    15241 attcggagaa acttatgtaa accgtgaaaa ctttgaagca atgcaaggct accacgccgg
    15301 ttggcgtaaa tcgggtattg gcggtgctga cggtaagcac ggcttagagg aatacctaca
    15361 aactcaggtg gtttatctgc aatttgatga taaagtatag attcttctaa aaactcccac
    15421 ttatcaaaat aagcgggagt tttcttttag gttaaccttg tatcaaaatt gcaaacaaaa
    15481 atattctaat gttaagtaaa tgtttaataa ttatttatgg ttaactcttt ttggctaatt
    15541 aatttgcaat ttaaattaat tgagtgcaga atgccattag ccttttttga aatcacattc
    15601 cataaaatgg cttgattaac acaacacaat tatcactcaa attaggattt tcattatgag
    15661 tattttccaa caaaccaatc caaaccgccg tcgttatggg ctagctgtat ttatcgggat
    15721 tattgccggt attatttcag cattcgtaaa atggggggca gaacatcctt tcccacctcg
    15781 tagccctatc gatctgttta ccgctgcttg cccgcaacct gtgttagatg caatgaatgc
    15841 cgcagcagac caagtggctg ccaaaaccat cgcattacaa gaatgttcac gtgcattttt
    15901 aaacccacca cacgttttct tacgtgatta tattggtatc gatccaactg aagcagcatt
    15961 tacctttgct gaccacgcgt tcaactggat tggtgtcacc catatgattt tctcgttagt
    16021 ctttgcgatt ggttactgca ttgtggcgga aatcttccca aaaattaaat tctggcaagg
    16081 tatcggtgcc ggtatcatcg ctaatatttg tgttcactac atcaccttcc cggcattagg
    16141 tttaacacca ccggttgctg aatggccgtt atatgaacac atttctgaat tagttggtca
    16201 tattttctgg ttctggacca ttgaggtgat tcgtcgcgat ttacgtaacc gtattacgcg
    16261 tgaacctgat gccgaagtgc cgttagatca accgttccgt taatttaaaa ttagctcgat
    16321 ttatacaaaa gccgcaatca cgttgcggct ttcttatttt acaagcggtc aaattttcat
    16381 gaaaatttac caaacaaaaa gcacattgtt tcatgtagca atgcggagct tggctttata
    16441 agaaaaatac accaagttgg aacagttttt caatttcatc gatctgtttc ttatcgttca
    16501 caaaaataat cacacggtca ttttctgcaa tcatggtgga tttgtgggcg ataataactt
    16561 cttcgcctcg caccaccgcc ccaacaattg ccccttgcgg tagttttaat tcacggattt
    16621 gtcgtccaac cacttttgaa gtggttgcat cgccgtgagc gataatttct accgctcctg
    16681 caaccccaag tttgagtgaa gaaacttgta aaatatcgcc ttttctaacg taactagcga
    16741 gagcagaaat agtagcttgt tgtggggaaa tggcaatatc aatagtgcca ccttgaatca
    16801 ggtgtaaata ggcagggcgt tgcactaaaa taatcacttt tttcgcccca agccgttttg
    16861 ccagcagggc ggacataata ttcgcttcat catcactggt gacggcaagg aataaatcaa
    16921 tattctcaat atgctcctca aacagcaact cttcatcgga ggcatcaccg gtaagcacca
    16981 tcgttttaga tagtttttct gctaattttt cggctcgaac cggattgcgt tcgataattt
    17041 ttacccgata ctgatcttct aaatcccgag ctaacgaaga gccgatgctc cctccaccga
    17101 caatcataat ccgcttatgt gggcgatcaa gccgttgtag ttcactcatt actgctcgaa
    17161 tatgttgggt tgcacagatg aaaaagactt catcacctgc ctcaataata gttgaacctt
    17221 gtggcacaat cgctttgtct tggcggaaaa ttgccacgac ccgagcatca atatgcggta
    17281 aatgatcacg cagggctgaa atcgggtaac cgaccaaagg cccaccgtaa taggctttta
    17341 cattcacgat actgactaac tcatcagcaa aatgagtaat ttgcaacgcc cccggatagt
    17401 gaataaggcg taaaatatct tctttgacta aaatttcagg ggcaataata tggtcaatag
    17461 gcaatacatc atcattaaac aaccgctctc gttctctcac ataatcagca ctgcgaatac
    17521 gggcaatttt ggtcggcaca ttaaataaag tgtaagcaat ttggcaagcg atcatattca
    17581 cttcatcact attagttaca gcaactaata gatcagcatc acctgcaccg gcatcacgca
    17641 aggtttgagg tgaagcatat tcgccccgaa tcacctgtaa atcgtgttta tctttgagct
    17701 tgtctaaacg agttgggtca ttatccacca agacaatatc attgtcttca ctcaccaaat
    17761 tttctgccag cgtagaacca acttgtcctg cccctaaaat aattactttc attactctgc
    17821 cactttttgt agttttgcgt agaagaaacc atcaccaccg tttggttgtg ggaagaactg
    17881 tttttctaac actttttcgc cgttaaaatc gatttcaagt tgttttgcat tcggtgtatc
    17941 ttgtaaaaac cgttgaattt gctcgctatt ttcttgcggt aacaccgagc aagtggcata
    18001 taacaaaatg ccgtttggct ttaacctttg ccataacgcc ttgagaatct caccctgtaa
    18061 tgtggctaat tctgcaatat caccctcttt acgcaaccat ttaatatcag ggtggcggcg
    18121 aatgactccg gttgcggaac aaggggcatc aagtaaaatg cggtcaaaca gcacaccctc
    18181 ttcaagccat tcctcaggtt tggaagcatc gccacaaatt acctgtgcaa tctgccccag
    18241 tcggactaag ttttcacgca ctcggcttaa acggctctct tcaatatcca acgccataac
    18301 ctttgctttc ggtgcttttt ctaaaatatg ggtagttttg ccacccggtg cggcacaggc
    18361 atctaaaacg gtttcaccat tttctgcccc gagcaactcc gctgaccatt gtgcgtgagc
    18421 atcttgcacg gttgcccaac cttgctcgaa atgtggcagt tggttcacat ttaccgctct
    18481 ctccagcaat aaagcacact ttggcacgca agcggtcgga ttttctgaat tttttgcaaa
    18541 ttcaggctca accagctcgc taatcaacgc cgcataatca ttggtcttga tatgttgttg
    18601 attgactcga atccacattg gtgggcgttg gttgtttgct tcaacaattt ctcgccagtt
    18661 cggataggct tttttaagtt tattgaccaa ccattcaggg tggagcgttt gccaatgttt
    18721 atctaccttc gctaagattt cttcttgctc tcgcagaaaa cggcgtagca caccgttagt
    18781 caaggctcgg aagctatcca gttttagcgt tttagttgca ttcactacct catcaaccgc
    18841 agcgtgtgcc ggcactcgca tataaagcag ttggtataaa cccactaaca gtaagcaatg
    18901 caccaaacgg gttttgcctt tcagcggttt ttcaactaat aatttgatga tcgattccaa
    18961 gcgaggcagc acacggcaca ctccgaaggt gatttcttgc actaagggta aatcttttgg
    19021 ttcaagctgt ttttgagcgt caggaatcaa ggtggaaagt gatttacctt gatctaacac
    19081 ctgtaaaata atggttgcac ttattgctct agaagaaagt gctttgaacg attgtttttt
    19141 cataaataaa aatgccattc cgacagaatg gcactattgt aactgaatgc gggattatct
    19201 taaaactaaa attggcttgg tggtgttgcg agccacttta accgtattag agcttaagcc
    19261 cttcgcattt ggtttgctgc ttgccagcat cataattaaa tccaccgact tttcatcggc
    19321 aatacggcaa atttcttcat aaatcgtacc atacgccaca atgtgctgca cttttgaacc
    19381 ttcaggaaaa tggtttttgg taaattcgtg caatttttgg tttgcttcag ccaccacttc
    19441 tttatcgaaa tttttcggca agaatgcaga aattaagctg ttatccaccg gctcaataat
    19501 agacacaacc cgataaaccg cattcggatt ttttgccgtc atttgtaatg ccgtatctac
    19561 cacatattta gcacttttta ggtcggctaa atcaatcgca ataagtaatt tgttatacat
    19621 atttattccg taggggcagg tcctgtgcct gcccgaatat taactaaaat agcggacggg
    19681 cacaggaccc gtccctacat agcatataaa tactatgcaa taacacactg ttttttcact
    19741 ctacggcgtt ggtttgccac aataccaaat accaacaata gagcaggaat gaagatccaa
    19801 tctttagaag gagcatcttg cggtacggca atgtagtgaa tggtttgatc ccagtttaag
    19861 cctgctttag ctgccggaga atccatttct accatatcaa tcaccacttt tggtgtttct
    19921 acgccatcaa ctttgatttt ttcatcggtt tgaattagcg ttaagcctaa gtttttcaaa
    19981 cgctcttcgc cggttgctcc ttccggtaca ggtaattgag cgtagaactc aatttcttta
    20041 ccgtaagggt ttaatccctc tacttttaaa gtaacatttt gacctacttt gcttgcaagc
    20101 aactgttctt caaactgcac cggctcgata tgacgttcag acggataaat tctgtccata
    20161 aagaagcccg gacggaacaa ggcgaaagcg gctacaacca gcaacgccgt ttcccaccat
    20221 ttgtttttag tcacaatata ttgcattgta gcagaggtaa aggcgagaac cccaacagtt
    20281 gcggtaataa acacaaccca gccgtgcccc ggataacgca gatcaattaa taataaatcg
    20341 gtattaaaaa taaataagaa cggtaaaatg acggttctta aactatattt aaatgccacc
    20401 ataccggtat taatcgggct accgcctgaa attgctgccg cagcgaacga ggctaaacca
    20461 acaggtggag tcacatctgc cataatccca aaatagaata cgaataaatg caccgcaatc
    20521 aacggcacga ttaacccgtt ttgacgaccg acttccatga taaccgttgc cattaatgat
    20581 gacaccacaa tgtagtttgc agttgtcggt aagcccattc ccaaaattaa gctgaatacg
    20641 gctaccaaga tcaacattag cacaatgttg cccattgata ggagttcaat cacacttgaa
    20701 agctgaaccc caaagcccgt tagtgccaca acgccgacaa taatccctgc tgttgcggta
    20761 gcgagggcga taccggtcat attacgaccg ccagcctcaa ggctatctac cacatctcga
    20821 acaccttgtt tgataatctc tttggttacg ctctctttac ggaagaaatt cagtaacggg
    20881 cgttgggtta attgaataaa aattaaggta atggttcccc agaatgcgga taagcccggc
    20941 gaaagcattt ccaccattaa gcaccaaagt agcacaacca caggaataag gtaatgtaaa
    21001 cctgcattta cggttggttt tctttttggt agagaaacaa tttctgagtt tggatcgtcc
    21061 gcttctaaat cagggtagct tgccacacgg cgaatagcca gtagatacca taagcctaag
    21121 aaagcacaga caatcataaa cgcataatct tctgccacat cacgaatcca acctaagccg
    21181 tagtaaacgc caatcgctaa tcctacgatc actaaaattg aagctacggt tcttagcaag
    21241 aagactaaaa tcgggcttgg ctcttcggct cttggtaagc cttgtaaatt catcttacaa
    21301 gcttctaaat gcacgatata caccaacgca atatacgaaa ttaacgcagg taagaaggcg
    21361 tgagtaatca gctggctata cggcatattc acatattcga tcatcaagaa cgctgcagcc
    21421 cccattaccg gtggcataat ttgaccgttt actgatgagg caacttccac cgcaccggct
    21481 ttttctttgg taaagccgac ccgtttcatc attggaatag tgaatgtacc tgtcgtcacg
    21541 acgtttgcaa tcgaagagcc tgaaatcaag ccggttaaag cggaagaaac caccgccgct
    21601 tttgccggac caccacgcaa atgccctaaa taggcaaagg cggttttaat aaagtagtta
    21661 cctgctcctg ctttatcgag caacgcccca aataatacga acaggaacac atatttggtc
    21721 gaaaccccaa gggctacacc aaacacgcct tcagtggtaa tccattgttg gttgataatt
    21781 tgagaaagcg aacctgagcg gtggcttaca atccaatctg ccgggaaata ttgcccgaag
    21841 aagttataga tcaggaatac aatcgcaata atcacaagcg gtaagccaag actacggcgg
    21901 gtcgcttcca gcaccaataa aatccctaaa cagccggcga taatatcttg cgtatttggc
    21961 gctccaaaac gtttcaccaa accttcatag aagaaaatat aatacaacgc taacccagct
    22021 cctacgatgg caaacaccca atctatttta ggaatatgat gtttaggcga gctggcaaaa
    22081 gcagggtaag ataggaacgc caagaacatt gcaaaggcta agtggataga acgggctttg
    22141 gtgtcgtcca ccaccacatt caaattaatg cctgcgtgag taagccattc ttggaataca
    22201 aacggcaatg gagaagcata ataaatttgg aacacagacc aaagaatggc gacatacaca
    22261 atggcttttt tcgcaagacc ggacggggtt cgccccccac tgtcattgga ggcaaccata
    22321 tcttgtaggt catcgtaatc aaccttagat tcaactgaca taaagactcc tcaaaacgca
    22381 agcggtcatt ttcttattaa attttacaaa tttcctcaaa aaacaaccgc ttgctcgtga
    22441 aaacactgtt gataagttat caattaaagg tgaaaatcga taacttatca acagtttcaa
    22501 aaaagcaaaa aaccagcacg ctaaaaaacg tgctgattga atcaaattac agaaaggaaa
    22561 tattacttaa tccaaccttt ctctttatag taacgaattg caccttcgtg taacggagca
    22621 gaaagggcgt ttttgatcat ctcttcttgt tttaagtgtt caaacgccgg atgtaaacgt
    22681 ttgaaacggt cgaagttatc aaataccgct ttggttacat tgtacacttt atctgcatcc
    22741 acatcggcag aagtcactaa cgttgcatat acaccgaagg tttctgtcgg ctcatccgaa
    22801 cctttatata aaccgcccgg aatcgtagct ttggcataat atgagtgatc tgccactaat
    22861 ttatcaattt cagggccggt taccggcact aatttcgcat cgcaagaagc ggctgcttct
    22921 tttaacgcac cattcgggtg acctacgtta taagtgatgg catctaagtt gttatcacac
    22981 attacagatg ccatttctgc cggtttcaat tcagaagcca ctttgaaatc tttatccgtc
    23041 cagccttttg ccgctaaaat cacgttcatt gttgcacgag taccggaacc cgggtcgccc
    23101 acgtttacac gttttgcttt taaatcatcg aacgatttaa tgcctgaatc ggtacgagcc
    23161 attactgtaa acggttccgg gtgaagcgag aaaatggcac gaattttatc gtttttctta
    23221 ccttcaaatg agcttgagcc gttataggcg tggtattgcc agtctgattg tgcaatcccc
    23281 atatccattt cttttgctgc aatcgcattt aagtttgcaa ccgatgcccc tgttgaagga
    23341 gcgttacatt ttaaacctgt ttttgctgaa tcacggttta ctaattggca aatagattga
    23401 cccacaacat aataaacacc ggtttgaccg cctgttccga tagtcacaaa tgtttcagcc
    23461 gcttgaacag atgctgttcc catcacaagg cttgcaagga aagaaagttt gactaatttt
    23521 ttcattttta actcctaaaa ttaaggatca gaaaacaaag atttattgtt ttgagccact
    23581 gctcacacta caagagatac aaaacttctt tgagttgcat ttgcctctta gagcttgttt
    23641 ttagcataga ttttataatt agtaaattta ttttttcgca taaaaaaatc tatgcctaat
    23701 gccacaagct aaaatgtttc actatctctt aacaaatgca catcgccttt tcgtcttaaa
    23761 aaaccgctac gatcaaaata ttcaattaat tgtaccgtca attttcgccc atactgcaac
    23821 tcatctcgca actggttcac cgaaatgctg ccgttttggg cgataaaatc tttaattaac
    23881 gttgcaaatt gcccgatttg ttcgcttaat aaaaatctat ctttgacgat tgggattaaa
    23941 tagcccaatt tcccgacttt atacagcaaa ttccgcattt gggtttcatc aatcgagagc
    24001 tggcttgcaa tatccctcac ccaaagagct tgattggttg cctcaaacag cggtcgaatt
    24061 tgttgccaaa tttgcaattc atcggcgttc aattcgattc gatgttccgg caaatgtaac
    24121 caaccacgac tattgaccaa ggctttttgc tccaccaaat cctcaataaa ttgatttgcc
    24181 aagttttcag gcaaatccaa taacgctatg cgatataaac gagctttggt cacgccgatt
    24241 tgatcttgat gttgcaggtg gtattctgcc attttttcca acacccgttg ctgggcttga
    24301 gctttaaaat ccgaattaaa taaccattta gacgagacat caaaccccag ttttgcaata
    24361 tcctctgcaa aacattgctc cgcccataac agcaaggata aatccatcgc tctgttttgc
    24421 agatagagat caaggcgtgt cgcaaagtca ttacaagcgg tggtttttgc taaatttttt
    24481 accaaagcta aacgggcttc ggtacgttta tgccgttttg gtgagtgaat ttccagcacc
    24541 tccgctccgg ctaacgttag gctgtcatca ccgctgcgga tgatcaactt atcaccaacg
    24601 gcaatatgaa gtggttcatc taaaatcact tctgcaaaaa attgctgatt tttgaccgct
    24661 tgttgcccct caagcaaatt caatttgccg gtaatgtgcg aagcaaaatg gtaaagatgc
    24721 acaatgctgt tttctttgaa ggcttgattg gcagtgagtt gaaccgtaat gcgatcggtg
    24781 gcaaatttcg gctcaagctc ggtaatccaa tcgcctcgct tgatttcctc tttttccacg
    24841 ttagcgatat ttaacgccaa acgttgccct gccactcccg tttccgaagg cgtattttgg
    24901 gcgtgaatcg ctttgacccg cactttttta ccattcgaca aaaataactc agagccaacg
    24961 ctcacttttc ccgccaccgt tgtgccggta acgaccaacc ctgctccttt cacattaaac
    25021 acacggtcaa tcgcataacg gaacggttta tgggtttggg tatgttgttg atttaattga
    25081 attaaatgtg cttttaattc ttcaatccct tgttgcgttt ttgccgaagt aacaaaggtt
    25141 tttgcttccg ctaaaaacgg atagcttgtt ttcacttgct caattaagtg gctgatttga
    25201 gtttcttccg cccgatctgc cttagtaatc acaatcataa tatgctggaa attcagcagg
    25261 tggagaatat ccaaatgctc ttcggtttgt ggcttaatcc cttcttcggc agaaatcacc
    25321 aacagggcgt gttgaatgcc gccaagccct gccagcatat tagataaaaa acgctgatga
    25381 cccggcacat caataaaccc taaaatatcg ttctcaatcg gtaaataggc atagcccaaa
    25441 tcaatggtta gcccacgttt ttgttcttcg ggcaaatggg cggtgttagt gccggttaag
    25501 gcttgtaaaa gcgatgtttt gccgtggtca acgtgaccgg cggtgcagat gatcattgat
    25561 agtccttata aaaatgagta actattctgg cgagcagatt taaaatctac aatatagaca
    25621 ttttcctgac caatcaggaa ctttacttgg tacttaccgt ttaaaatggg aatttctttt
    25681 ttcttgcgaa gtcgataaac atcggcagta aaggaaagtt tatccacttc actttttatt
    25741 gcatcataaa attgttctgc aataatcggg ttttgggatt gttgtaatat ataatctgct
    25801 tgataaaaca attttatttc tgctttctgt agccaaacaa tattgtaatc aaacttcatc
    25861 atttttccgt gattcccaat tttttgcgta aatcttccat cacctgagcg tgggatttag
    25921 tttcaattaa gccattttct aattgatgta ataaatcaag ttcatcatta gtataaaaac
    25981 tttgtggctt atctgtgcgt aattttgcta aatcttgtgc gagtatgagt tccatatttc
    26041 ccccttacaa acttagatta ttcaatattg taacctgata aaactaaagt tcaaggagtg
    26101 tatttaaggc gataaccgct cttttttcca ctcattattt tccaaccaat aatgaatgcg
    26161 gtcgtgtagc cggctacttc tgccttgcca gagttcaata ctgtcgggaa tcagaatata
    26221 gccaccccaa tgcggtgggc gaggcactga aagtggatat ttcaatgcaa attgagctga
    26281 ttttagcaac aaagccttgt agttttcgat aggctgactc tgctcgctcg cccaagcccc
    26341 caaacggctg gtgtaaggac gagagtcaaa ataggcatcg gattctgcct ctggaatttt
    26401 tgctattttc ccttcaatcc gcacttgacg ttgtaattct gcccaaaaga aggttaaaca
    26461 tccaaaagga ttatcggcaa tttcccaccc tttacggctt tgataattgg taaagaacac
    26521 aaagccttgt gaatttacct ctttcaacag caccattcgg ctacttggtc gcccgtttgc
    26581 tgcaacggta gcaatattca ttgctgtcgg ctcattcact ttggcattga ttgcctcact
    26641 caaccattgt tcaaattggg tgattgggtt tgagtgacaa tctcggattg aaagcacttt
    26701 tttggtgtaa tcttctcgaa tgtggtgcag atccataagg attcctttat cttattctaa
    26761 ataatcggac aggcacagtc tgccctacca aaattaatat tccaacatct caatcaactt
    26821 atcaaactcc gcgaccgagc gtaaatctaa ccaaaatttc tgctgagcaa aacgcccgat
    26881 aatcgggctt gggtaggttt taaattgttg ttccaatgca attaaatcgc tctgtttttc
    26941 agcggaaata gtcactgcca ccgaaggtaa ggtttctgtg ggtaacgcac cgctgccgat
    27001 ttgagcgagg cttagctcaa tttgcaaaat ataagcagaa tttaaccgct tgtgtagtgc
    27061 ctgttttaat cgctctgctt tgtgttgcaa ggtttcaagc ggttgagtga gtaaatgaag
    27121 agtcggcaag ttatcggtta attgctccgg aaataagtag tggcgtagcg ttgcctcaag
    27181 tgccgataaa atcactttat cgcaacgtag cacccgtttt agcgggtgtt gttgcagttg
    27241 gctaatcatc gcttggctac cgacaataat gccggcttgc ggcccgccta ataatttatc
    27301 gccagagaag gaaaccaaat ctaccccagc cgctactttt tgctgaacct ttggctcagc
    27361 aggcaaatta agagcttgca tatcagttag cgaaccactg cctaagtcgg taatcacagg
    27421 caggttaaac tctttaccga gagccaccaa ttcctcttcc gacaccgaac tggtgaaccc
    27481 ctcaatgtgg tagttactgg tgtgaacttt cattaaaaag gcggtatttt cggtgatcgc
    27541 gttgcgataa tcctttaaat gagtgcgatt agtcgtacca acttccacca atttgcaacc
    27601 ggcttgagcc ataatatccg gaatgcggaa tgccccgcca atttccacca gctcgccacg
    27661 ggaaacgatg acttccttgc cttgtgcgaa ggttgctaac atcaacaaca ccgctgccgc
    27721 attattattc acaatgcaag cggcctccgc tccggtaagt atttgcaaca actcggaaat
    27781 gtagttatct cggtgcgagc gcttgcctgc ttcaatatca aattccaacg ccacattgtt
    27841 tcgcattgcg ttggttgctg cctgtatcgc cttttccgac cacaacccac gccctaagtt
    27901 ggtgtgtaac accgtaccgg ttaagttgaa cacggaacgg attttcacct cactcaacgc
    27961 ttgcactttt tgttccagcc ttataaaaaa caggttttca tcggcaataa aatccggcaa
    28021 ggcttgctgt tgggaaataa attgacgtgc ttgagtaagc aaactcctag cttgttcagc
    28081 cacgctggaa tatgcaaatt tttggcataa ttcgaccgct tgtggctttt tcaacaagag
    28141 gtcgagcgag ggaatttggc gaaatagttg ttgcataatg tgaatgattg agagaatatt
    28201 ttggacaatt ctaataaata aagtacaata ttgccaattt ttcggaagtg cgtcatctcc
    28261 ggtgaggtgg caggacttca aatcctgttg aggacgccag cgttctcggg tgggttcaac
    28321 tcccatgcac ttccgccaca tttcaaaagc cgttaatctt taacggcttt ttgcatttct
    28381 gccacattct ctctttccgt tttgataaaa aatgagactt agctcacatt tttttat
//
LOCUS       DANLXD010000023        27591 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.023, whole genome shotgun sequence.
ACCESSION   DANLXD010000023 DANLXD010000000
VERSION     DANLXD010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 27591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27591
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.023"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            7..507
                     /locus_tag="PXD18_000791"
     CDS             7..507
                     /locus_tag="PXD18_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HDL6301243.1"
                     /translation="MKKSLFVLSLISFALVGCSSNSGESTSAVETTEANATWQSADSI
                     QTAPMPASMNQPIATQPTYQQPTYSAPQPISAAPAPMPVSSGSDSSQVETVGNCQVVR
                     DANNAPIYSQITKGCYTESHYTVGKSDTLYLIGYLTGTNANQIAQLNGLNTGSPLKVG
                     QVLRVR"
     gene            520..720
                     /locus_tag="PXD18_000792"
     CDS             520..720
                     /locus_tag="PXD18_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301244.1"
                     /translation="MNRTLLAFAISCAFLTACSSPTQPQVEDPNMLPAGTLQPIEGSG
                     ASQDSYSWPSDIQSTSMPDSMK"
     gene            739..2019
                     /locus_tag="PXD18_000793"
     CDS             739..2019
                     /locus_tag="PXD18_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDL6301245.1"
                     /translation="MKKQFILLPLVSAVLAACSSNNPAPVVNASGNNELSPGVMQPVD
                     VSAGAINSSGGWQSDIQSAPMPSSMNTTPVQTMPQPVSVPQPVATVPQPITNPVITEQ
                     PPQPTTTTKIVKKTKTVEKKVDQNFEIPRDANNAPMYNQIQKGFYDGSTYTVRKGDTM
                     FLIAYIVGKDVKEIAALNNMSEPYQLSVGQKLKTGKSATETITVEEKVTVPVEPQITY
                     QQGANGTTYASGGNITGPVKAGTANADVTPVNNGIKATTATAPAVTASVGTVNATEDR
                     TASTIRAIDGTASGAVQSSNTVSAPASSIKWQWPTSGRVISGFSSAEGGNKGIDIAGN
                     KGQDVRAAAAGKVVYAGNALQGYGNLIIIKHTDDFLSAYAHNNTIEVDEQETVKAGQK
                     IATLGSTGTNTNKLHFEIRYKGKSVDPARYLPRK"
     gene            2260..2451
                     /locus_tag="PXD18_000794"
     CDS             2260..2451
                     /locus_tag="PXD18_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301246.1"
                     /translation="MDPTEPSHRIYILLSEDRFQAEVFSTKLSESSMLLEAVKGGYIS
                     KDGKVRLLKKAEGWKIYYE"
     gene            2444..3010
                     /locus_tag="PXD18_000795"
     CDS             2444..3010
                     /locus_tag="PXD18_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HDL6301247.1"
                     /translation="MSETKIRCDWCKSSEIYMKYHDEEWGKPEFDSLKLFEKICLEGQ
                     QAGLSWITVLKKREAYRQAFHQFNPEKIAKMGEEEIDLLMQNTSLIHHRAKLEAIIKN
                     AKAYITMQQNGEDFSRFIWSFVNYQPQINDVPTLEAVPAHTETSKAMSKALKKRGFVF
                     VGETTCYAFMQSMGLVNDHLNNCVFKHK"
     gene            complement(3057..3287)
                     /gene="acpP"
                     /locus_tag="PXD18_000796"
     CDS             complement(3057..3287)
                     /gene="acpP"
                     /locus_tag="PXD18_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDL6301248.1"
                     /translation="MSIEERVKKIIVDQLGAKAEDVKPEASFIEDLGADSLDTVELVM
                     ALEEEFDIEIPDEEAEKITTVQSAIDYVQNNQ"
     gene            complement(3474..4151)
                     /gene="rpe"
                     /locus_tag="PXD18_000797"
     CDS             complement(3474..4151)
                     /gene="rpe"
                     /locus_tag="PXD18_000797"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HDL6301249.1"
                     /translation="MSKNPYLIAPSILSADLARLGDDVAEVLKAGADLIHFDVMDNHY
                     VPNLTFGPAICKALRDYGIQCPIDVHLMVKPVERLIPDFAKAGADYITFHPEATEHID
                     RNLQLIRDLGCKSGLVFNPATPLSYLDYVMDKVDVVLLMSVNPGFGGQSFIPSTLDKL
                     KEVRRRIDESGYNIRLEVDGGVKINNIADIAAAGADMFVAGSAIFDQPDYQAVIAQMR
                     DELRKVG"
     gene            4345..4617
                     /locus_tag="PXD18_000798"
     CDS             4345..4617
                     /locus_tag="PXD18_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005709555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HDL6301250.1"
                     /translation="MKKGIHPENYREVLFYDASVQQGWVIRSCAATNKTMVWEDGKEY
                     PLYTLDTSSASHPVYTGKRREVNTEGRASQFKDRFKGFASTLSNQK"
     gene            4626..4751
                     /gene="ykgO"
                     /locus_tag="PXD18_000799"
     CDS             4626..4751
                     /gene="ykgO"
                     /locus_tag="PXD18_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HDL6301251.1"
                     /translation="MKILNSLKTAKSRHPDCQIVRRKGKLYVICKTNPRFKARQR"
     gene            4931..5704
                     /locus_tag="PXD18_000800"
     CDS             4931..5704
                     /locus_tag="PXD18_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL6301252.1"
                     /translation="MLKKLSIAALALTLSVSAFAKESLLERINNKGTITVGTEGTYAP
                     YTYHDASGKLTGYDVEVTRAVAEKLDVKVEFKETQWDAMLAGLKGERFDLVANQVALT
                     SPERRATFDKSESYSWDGAALLVREDETKIKTPADVKGVKTAQTLSSNYGEIARENGA
                     DIVPIDGMAQGLLLIQQKRADATFNSHLSLLDYLKKNPNSGLKIVWEKEEKVGAGLIA
                     NKGNDEALAKISKAIVELREDGTLKKLGEQFFGKDISVQ"
     gene            5787..6503
                     /locus_tag="PXD18_000801"
     CDS             5787..6503
                     /locus_tag="PXD18_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDL6301253.1"
                     /translation="MLNDLLLSIPFMTQARVDLVLSGFWPMVQAAFLVSIPLAIASFI
                     IGMLIAVAVALVRISPATGFFHRLLLWLVKGYISIIRGTPMLVQICIVFYGLPAIGIF
                     IDPIPAAIIGFSLNIGAYGSETIRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAF
                     RVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQVANMSYDFLPVYIEAGLIYWCFC
                     WVLFLIQARLEVRFNRFVAK"
     gene            6513..7265
                     /locus_tag="PXD18_000802"
     CDS             6513..7265
                     /locus_tag="PXD18_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDL6301254.1"
                     /translation="MLKIRNIHKTFGNNAILRGIDLDIQKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEQGTLEFSGNAPLKIDFAVKQSKKEILALRRKSGMVFQNYNLFPHKTAL
                     ENVMEGPVFVQQQAVEIAQKNAKALLEKVGLADKAELYPFQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNTMKELANEGWTMVVVTHEIKFALDVADVVVVMDG
                     GEIVEQGSPQQLFNHPQHERTKRFLNQIRADK"
     gene            complement(7481..8014)
                     /locus_tag="PXD18_000803"
     CDS             complement(7481..8014)
                     /locus_tag="PXD18_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HDL6301255.1"
                     /translation="MEFLAPVISLIVGFLSFVLVLRTWLQFCRVDPRLPISQTLLKIT
                     EPMVSPVGKLIPTVKNICFPALLIAAALVTLQFILFGVDLPRAVLIGLLSVVKTFGQI
                     LFFTTLIRALMSWVTQGNHPLDYTVAQITEPVLGFIRKLLPRTGMLDFSVMVLGFGLL
                     LLNSLFYQIFGGLWAAA"
     gene            complement(8120..8461)
                     /locus_tag="PXD18_000804"
     CDS             complement(8120..8461)
                     /locus_tag="PXD18_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggL family protein"
                     /protein_id="HDL6301256.1"
                     /translation="MAIQRNARQRKKMHLGEYQELGFLIKFTFAEGTGIDQIDETVDR
                     FIDEVIRPNGLALEANGYLNWEGLVCLEKLGKCDESHRQLVKTWLETNGLKEVQVSEL
                     FDIWWDYPAQA"
     gene            complement(8485..9234)
                     /gene="trmB"
                     /locus_tag="PXD18_000805"
     CDS             complement(8485..9234)
                     /gene="trmB"
                     /locus_tag="PXD18_000805"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HDL6301257.1"
                     /translation="MSEKQTFADKKRKTVEQAEFTEDGRYLRKVRSFVLRTGRLSDYQ
                     RDMMNNNWANLGLDYQPMPFNFEQIFGNNNPVVLEIGFGMGKSLVEMAEQNPNRNYIG
                     IEVHTPGVGACIAYALEKGVKNLRVICHDATEILRDSIADGTLGGLQLYFPDPWQKAK
                     HHKRRIVQPEFISRVIRKLSPNGFIHFATDWENYAEHMLEVLRQFESELQNTSATNDF
                     IPRPNFRPLTKFEERGHRLGHGVWDLYFTKK"
     gene            complement(9244..10194)
                     /locus_tag="PXD18_000806"
     CDS             complement(9244..10194)
                     /locus_tag="PXD18_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000288132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HDL6301258.1"
                     /translation="MNSRILATGSYLPTKVRTNADLEKMVDTSDEWIVTRSGIRERRI
                     AEPDETVATMGAKAAQQALEMAGIEANDIDLIVVGTTTNSHAYPSAACQIQGLLQIED
                     AIAFDVAAACTGFVYALTVADQFVRNGQVKKALVIGSDINSRMLDETDRSTVVLFGDG
                     AGAVILEASEELGIISTHLHASPDLENNLTLRSQKRGEERSGFIEMQGNATFKIAVNQ
                     LSSVVEETLEANNLQKSDLDWLIPHQANLRIITATAKKLEMEMDQVVVTLDKYANTSG
                     ATVPVALDEAVRDGRIQRGQLLLLEAFGGGWTWGSVLVKF"
     gene            complement(10340..11359)
                     /gene="hemB"
                     /locus_tag="PXD18_000807"
     CDS             complement(10340..11359)
                     /gene="hemB"
                     /locus_tag="PXD18_000807"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HDL6301259.1"
                     /translation="MQVIQSQYPLRRMRRLRKHDFSRRLVAENQLTVNDLIYPVFVIE
                     GENQRVQVPSMPGVERLTIDQLLVEAAELVKYGVPAVALFPVVGDVKKSLMAEEAYNP
                     QGLAQRAVRALKAQFPELGVITDVALDPFTTHGQDGIIDETGYVLNDVTTEVLVKQAL
                     SHAEAGADIVAPSDMMDGRIGKIREALEQNGFINTQIMAYSAKYASNYYGPFRDAVGS
                     AGNLKGGNKYTYQVDPANGNEGLHEVAMDIQEGADMVMVKPGMPYLDMVWRVKENFGV
                     PTFAYQVSGEYAMHMAAIQNGWLKERECIMEGLLCFKRAGADGILTYFAKRVAKWLYE
                     EAQAK"
     gene            complement(11440..12195)
                     /gene="tatC"
                     /locus_tag="PXD18_000808"
     CDS             complement(11440..12195)
                     /gene="tatC"
                     /locus_tag="PXD18_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HDL6301260.1"
                     /translation="MSQVDESQPLITHLIELRNRLLRSFICVLLVFCGLVYWANDIYT
                     LLATPLTDNLPDGATMIATNVATPFFTPIKLTIVVSVFLSVPFILYQIWAFVAPALYK
                     QEKRLVYPLLVSSTLLFYCGVAFAYYVVFPLVFGFLTSTAPEGVTMATDISSYLDFVL
                     TIFMAFGICFEVPVAIILLCWAGVTTPEDLKAKRPYIIVAAFVIGMLLTPPDIFSQTL
                     LAIPMCLLFEVGVLFARFYRPKDDDEPSEQVAQ"
     gene            complement(12182..12826)
                     /gene="tatB"
                     /locus_tag="PXD18_000809"
     CDS             complement(12182..12826)
                     /gene="tatB"
                     /locus_tag="PXD18_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HDL6301261.1"
                     /translation="MFDIGFSELVLIMIVGLVVLGPKRMPIAIRTVMGWVSTIRGLAA
                     NVQNELAQELKLQELKESIKKAEELNLSSLSPELNKTVEDLKMSATQLQDSLNSAKNE
                     LEKTAAESSTIPKLTDEQVAEIQQKIEQESQVLEAQELQKNAQNKPLEVDSLSEQLNV
                     TRTEKPLSADELAEQAEMDESLLTLESYYPPDDDLATPQSSESAQKSEANNVAS"
     gene            complement(12830..13051)
                     /gene="tatA"
                     /locus_tag="PXD18_000810"
     CDS             complement(12830..13051)
                     /gene="tatA"
                     /locus_tag="PXD18_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HDL6301262.1"
                     /translation="MGGISIWQLLIVVAIIVLLFGTKKLRTLGSDLGESVKGFKKAMA
                     DEKKDAEFEKVEAKDAISAEQKAKEKEQA"
     gene            complement(13162..14799)
                     /gene="ubiB"
                     /locus_tag="PXD18_000811"
     CDS             complement(13162..14799)
                     /gene="ubiB"
                     /locus_tag="PXD18_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HDL6301263.1"
                     /translation="MNIKNLNRFYHIIRTFLRYGIDEAIPNLPITRKIKLGRKALFWV
                     KNQHSDKPYGVRLRLALQELGPVWIKLGQMLATRRDLFAPELADQLALLQDNVEPFDG
                     KIARQIIEQALGGKLETWFENFDETALASASIAQVHTAKFNQNQPLAGKDVVLKVIRP
                     GIEPVIKADLELMYEIAHFIPKLSNDGKRLRAVEVVREYEKTILDELDLRKEMHNAIR
                     LRANFENSEMLYVPEMYQDFCHKNLIAMERIYGIPVSNIAELEANSTDMKLLAERGVQ
                     VFFTQVFRDSFFHADMHAGNIFVNREHPENPQYIGIDCGIVGTLNHNDKRYLAESFVA
                     FFNRDYRRVALMHVESGWTPPDTDIDKFEQAFREVCEPIFAKPLSEISFGHVLLNLFN
                     VAREFNMEVQPQLVLLQKTLLYIEGLGRQVYPQLDLWQTAKPFLQNWLNEQVGVKAMV
                     RDIKQRLPQYREHFAEFPEALFKALQEQKQINFRLAEINESLKAQNSNANSRFLVLSI
                     SAIVICGAFWKFESLPIWLSVPLLTLFPLVLILSQRK"
     gene            complement(14873..15850)
                     /locus_tag="PXD18_000812"
     CDS             complement(14873..15850)
                     /locus_tag="PXD18_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005825116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HDL6301264.1"
                     /translation="MKQIIAQARENAVRAVDFQRVLMYWHIGKRIFEQEQQGQERADY
                     GTYLIKMLAKELEPEFGSGFCSRQLERYRQFYRAFPIATALRSQLNWTQYRRLIQISD
                     SDKREFYLAESCKNNWSSRQLERQINSSLYERLLLSNDKESVLAVARNEQQPVDPKQL
                     IKDPMVLEFLGLKRESAYYEKDLEQAIITHLQDFLLELGNGFSFIARQKRLHLDGDDF
                     FVDLVCYNRLLQCFVIFEIKTHKLTHQDLGQLQMYVNYFDRVEKLPHENATIGVLLCA
                     DKNDAVVKFSLPENQNKIFASQYQLYLPSEQTLIAEVQKEIENFEQKYP"
     gene            complement(16011..16658)
                     /locus_tag="PXD18_000813"
     CDS             complement(16011..16658)
                     /locus_tag="PXD18_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HDL6301265.1"
                     /translation="MLNNVKQQLMLPQFTFGLIETAFNALLKRSPHIEPNLRKLSGKV
                     LKIALTSPKIDFFVLFSESRTDWLGNYEGEADCTVQLAFDTLPKLADKQKLTELINNK
                     SLVLTGDIQVLQHFTALLEQLEKDPAELLSPFVGDVVAQTSTDLAKKLLGKVKAQFEQ
                     NNQHLVENLIQERPVLVHRLQAVHFYDQVEELAQQALKLEQKFTHYVRSSSHQQS"
     gene            complement(16849..17601)
                     /gene="ubiE"
                     /locus_tag="PXD18_000814"
     CDS             complement(16849..17601)
                     /gene="ubiE"
                     /locus_tag="PXD18_000814"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HDL6301266.1"
                     /translation="MQQSAETTHFGFKTVAKEEKQQLVANVFHSVAGKYDLMNDLLSF
                     GIHRVWKRFTIDCSGVRKGQKVLDLAGGTGDFTAKFSRIVGESGEVILADINSSMLEV
                     GREKLRNLGVVGNVSYVQANAECLPFADNTFDCIVISFGLRNVTDKDKALRSMFRVLK
                     PGGRLLVLEFSKPIIDPISQLYNFYSFNILPKVGEVVVNDAESYRYLAESIRMHPKQD
                     ELKAMMEQTGFESVNYYNLSAGIVALHRGYKF"
     gene            17946..18899
                     /gene="corA"
                     /locus_tag="PXD18_000815"
     CDS             17946..18899
                     /gene="corA"
                     /locus_tag="PXD18_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HDL6301267.1"
                     /translation="MIRAFGLDNACLISVDETNPTLLNDAIWIDLIDPSEAERTVLEN
                     RLDQTLAEERELEDLEASARFFEDEDGLHLHSFFYCLDDDDYADIATVAFTIRDGRLF
                     TLRDRDLPAFRLYRMRSRREKLIDSNAYELLLDLFETKIEQLADVIEEVYADLEKLSR
                     VILNGQQENENFNDALSRLTEFEDASSKVRLCLMDTQRALSFLLRKTRLPNNQLEQAR
                     DIMRDIESLQPHNESLFQKVNFLMQAAMGYINIEQNRIMKFFSVVSVMFLPATLVAST
                     YGMNFEFMPELHFQYGYPMAIGLMIVAASAPYLYFKRKGWL"
     gene            19052..20857
                     /locus_tag="PXD18_000816"
     CDS             19052..20857
                     /locus_tag="PXD18_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4153 domain-containing protein"
                     /protein_id="HDL6301268.1"
                     /translation="MLSKLQRFTLMIKSTIIKHPLEILFVTYVTILLINNVSDYELIK
                     RFQNLIALFPICFILLYLIRDTKAYWLFAPIPIAIVFFFGQINLTLLEDSRYWATIFC
                     VFLCLISQYWYKNNHYFVAGTTNKLVNIVFATVLSGIIFATLSAITIAIIALFDLNKQ
                     NNFHIFEKFGIFSSFWAFPVLFLTLEQQTTNDSRYLNRISEMLLNWILSPALIIYTAI
                     IYAYVIFIAAKGQMPDGVVANVALPYLAFGLAIQAVQLLLKNAKWQWFYSHFTYLALL
                     PLTLIWYAIYIRFSHYGLTEARIYLVIGTITLSICYTLLLFKQLAQYRLFSAVSIAII
                     LISVFILDPKTVALKDQTKRLDNYLLKHKLLDVNNKISTKAVLKYQESLNENRDEAEY
                     FYSMLHYVARGMPAAQFKEKYGVNSSYDLMSEIRERNTDPRYFEATNSELVRLTKADM
                     ANAREYITFSSQLYRPNSFSHQKIENKLCQKRLSQGYYFEGNILNIEYQYSETAQDCS
                     SITQDPTEFVIYFKGLGTTIEFNINDILKKIFAKHQLSITQQHKNEVLEKIKGDLLKM
                     DLGNSVLGLKHIELRFEDNIGYIVESISTQYIMLK"
     gene            complement(20900..23929)
                     /locus_tag="PXD18_000817"
     CDS             complement(20900..23929)
                     /locus_tag="PXD18_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4981 domain-containing protein"
                     /protein_id="HDL6301269.1"
                     /translation="MSLPNYYQDPSVLHLNTTLHHAYFIPFAKGQTPNQLEREQSELF
                     TLLNGDWKFNFYPSPHDLPEDFLNTKFTHQIPVPSNWQTQGFDAHQYTNINYPIPFDP
                     PYVPHQNPCGVYQREITFNPKPNKRYLLNFEGVDSCLFVYVNGEFVGYGQISHSTNEF
                     DITKQLKQGKNSLVVVVLKWCDGSYLEDQDKFRMSGIFRDVYILEREQNYLQDFFIRY
                     QLNADLSKAELKVETQFSTYTEAVHFQLFDPENRLVCEQTSGDFCQEICNLCLWNAED
                     PTLYTLCLSYQNEIIEQKIGFRQIRVENGVMLFNNAPIKFKGVNRHDSDPKTGYSISR
                     EQALVDLRLMKAHNINAIRTAHYPNAPWFSELCDQLGFYLIAESDLESHGSSAVYIES
                     PENSIFLNVPNPNKQEEIRQQAVDNFCYFARDPLFKQAILDRNIANVERDKNRTSVII
                     WSLGNESGFGENFEVAARWVKQRDPSRLTHYEGSIYQHSAHQNDLSNLDLYSEMYPST
                     ERLEEYFSDFANHKPFILCEYSHAMGNSSGDMEDYWQTFQRYSGACGGFVWEWCDHAP
                     LLPNSELSAEQKTEKYGYGGDFGETLHDGNFCMDGLVSQQRVPHSNLLEVKNVNRPVR
                     AELKAGKIWLKNQLDFSDLADYLTVHYCFSENGETTLQGQCLVNCQPNQTACLPLTLP
                     EPNGKLQLLTLDYSLNESTALLEKGHHLGFDQITLHQAMVTPALNPRPQAVIFVQDFA
                     NEWRIQQGDYRYTFDKLKGIFSRIEKNGEAVIEQPLDFNIWRAPTDNDRLIREFWKKA
                     GYDNCYTRAYHTELMQDKNGVNITAECGIVATAQSRILTLKVNYHLAPNGEMTIQVQA
                     TRPAHLPFLPRFGLRFFLNKRNNQVSYFGYGEQESYIDKYHLAKLGAYQTSARENHTD
                     YLKPQENGSHFGTHYVQANGITVTSPQPFSFNLSPYTQEELTTKSHSYDLVESPSTVL
                     CVDYKMSGIGSNSCGPNLKPQYRLNETNFEWLLKLSF"
     gene            24107..24964
                     /gene="menB"
                     /locus_tag="PXD18_000818"
     CDS             24107..24964
                     /gene="menB"
                     /locus_tag="PXD18_000818"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005723289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HDL6301270.1"
                     /translation="MLYPSEEFLYAPVEWVDHSEGYTDIRYHKSKDGIAKITINRPEV
                     RNAFRPQTVKEMIEAFSDARFDEKIGVIVLTGEGEYAFCAGGDQKVRGDYGGYKDESG
                     VHHLNVLDFQRDIRTCPKPVVAMVAGYAIGGGHVLHMLCDLTIAADNAKFGQTGPKVG
                     SFDGGWGASYMARLVGQKKAREIWFLCRQYNAQEALDMGLINTVVPYADLEKETVRWC
                     REMLQNSPIALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNEKREP
                     DFSKFRRNP"
     gene            25047..27449
                     /gene="mrcB"
                     /locus_tag="PXD18_000819"
     CDS             25047..27449
                     /gene="mrcB"
                     /locus_tag="PXD18_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1B"
                     /protein_id="HDL6301271.1"
                     /translation="MSDVELNEQSEQEPEQKPKKRNYFLSTLFKIGVIGACSMAFYGI
                     YLDGKIRSKMDGQIWELPAEVYARIESIKIEDNLTLEQTKQALLDNGYRQVSQVATPG
                     DFKIEENQLVLLRRAFPFPETPESQRVLRLTFKQDKLTYIEDLVQGKLIEEFRLDPKL
                     LALLHSDSDEERQALRLQQYPRLLIESLILTEDRRFYQHDGISPIGIARALITNYQAG
                     RTVQGGSTLTQQLVKNLFLSNERSLVRKVNEALMSVILDFRYDKNRILETYLNEIYLG
                     QNGSYQIHGFALASQFYFGRPIQEISLDQIALLVGMVKGPSLYNPWRNPQGAVERRNV
                     VLRLLLDHQVINQELYALLSSRPLNIREKGTIYREQPAFMQALTIDLKNELGEIKSAQ
                     LSGTKIFTTLDRKQQRSAEQAVITGLEDLESKNKKVSDLQSAIVVAEYRTGKVRAIVG
                     DRLTQFAGFNRAIQSKRQIGSLVKPSVYAIALAQPELFRLNTPIQNKQISIKVGSTYW
                     TPRNYDRSFSGSVMLMDALVRSLNIPTVNIGMKVGLKKVIAKQKEMGWDNAEIPPYPS
                     TLLGSYSISPYDVTRSYQVIANEGLKTPLTTIEAIISHNGEMFYQRDSGKVSEQVLPP
                     EAAVQTMYAMQQVVERGTARSLQNDFAKLKLAGKTGTTNNARDTWFVGIDGEHVTTVW
                     LGKDNNGDTNLTGSSGALYVYKQYLERALPQAYRLPKLNTMQWVGINSYGSWNCDSGR
                     QIPVWRDKGQRYCTSAGNVVATEKPSVWDALSLKKENIEAKAEEAEGKQPIPTEEVAP
                     IE"
BASE COUNT         8112 a         5906 c         5523 g         8050 t
ORIGIN      
        1 ataaaaatga aaaaatcact ttttgtttta tctctgattt cttttgcttt agtgggttgt
       61 tcaagcaatt cgggtgaatc cacttctgcg gtagaaacaa cagaagcaaa tgcaacttgg
      121 caatcagcag atagcattca aactgcacca atgcctgcct cgatgaatca acctattgcc
      181 actcagccaa cctatcagca gccgacttac tctgcaccac aaccaatttc ggcagcacca
      241 gcaccaatgc ctgtttcaag tggtagtgat agctctcaag ttgaaacagt agggaactgc
      301 caagtggtgc gtgatgcgaa taatgctcct atctattcac aaattaccaa aggctgctac
      361 acagaaagtc actatacggt aggtaaaagt gatacgcttt atttaatcgg ttatctaacc
      421 ggcaccaatg ccaatcaaat tgcgcagcta aatggtttaa ataccggctc tccactgaaa
      481 gtcgggcaag tcttacgtgt tcgttaatag gcagagaaaa tgaacagaac ccttttagca
      541 tttgcaattt cttgtgcatt tttgaccgct tgtagctcgc ctactcagcc acaagttgaa
      601 gatccaaata tgttacctgc aggcacatta caaccgattg aaggctcagg cgcaagccaa
      661 gacagttaca gttggccgtc tgatattcaa tcaacgtcaa tgcctgacag tatgaaataa
      721 ttttaggaca atcatttaat gaaaaaacaa tttattcttc tccctttagt ctctgctgtt
      781 ttggcagcct gttcttcaaa caatccagca ccggtggtga atgcttccgg taataacgaa
      841 ttaagcccgg gcgtgatgca gcctgttgat gtgagtgcag gtgcaattaa ttcaagcggt
      901 ggctggcagt ctgatattca atctgcacca atgccaagct cgatgaatac cactccggtg
      961 caaacaatgc cccagccggt ttcagtgcca caacctgtgg cgactgtacc gcagccaatt
     1021 accaatccgg tgattaccga acaaccacca cagccgacaa ccacgaccaa aatcgtgaaa
     1081 aaaacgaaaa cggtcgagaa aaaagtggat caaaattttg agatcccgcg tgatgccaac
     1141 aatgccccaa tgtacaacca aattcaaaaa gggttctacg atggctctac ctataccgta
     1201 cgcaaaggcg acacaatgtt tttgattgcc tatattgtgg gtaaagatgt aaaagaaatc
     1261 gccgctctta ataatatgag cgaaccttac caattaagcg tagggcaaaa actcaaaacc
     1321 ggcaaatctg caacggaaac tattaccgtg gaagaaaaag tcaccgtacc ggttgaacca
     1381 caaattacct accaacaagg tgcaaacggc acaacctatg cttctggcgg taatattact
     1441 gggccggtaa aagcaggcac agccaacgct gatgtcacgc cggttaataa cggtattaaa
     1501 gcaacaactg caactgctcc ggcagtaact gcttctgtcg gtacagtaaa tgcaacagag
     1561 gaccgtaccg cctccaccat tcgtgctata gatggcacag caagtggtgc cgtacaaagt
     1621 agtaatactg tttctgcacc agcttcatca attaaatggc aatggccaac cagcgggcgt
     1681 gtaatttcag gcttctcctc agcagaagga ggtaataaag gcattgatat tgccggcaat
     1741 aaaggacaag atgtacgtgc tgccgccgca ggtaaagtgg tatatgccgg taatgccttg
     1801 cagggttacg gtaacttaat catcatcaaa cataccgatg atttcttaag tgcttatgca
     1861 cacaacaata ctattgaagt tgatgagcaa gaaacggtga aagccggtca gaaaatcgcg
     1921 actttaggta gtacaggaac caatacgaat aaattacatt ttgaaattcg ttacaaagga
     1981 aaatctgtcg atccggctcg ttatttacca agaaaataag agtaactttt tagcataatc
     2041 cgaccgcttg tgtactacaa gcggtcaatt tttaggaaaa ttatgcaaat gaaaaaatat
     2101 atcgcacaca tgataagttc gttactgctg atagtttgtt cggactaccg agcaacacca
     2161 actagcccaa gcgatgctta cacttgctct ccttcttttc gctactcttt cttaaaaaaa
     2221 acgtgcatac ctttattcag tatagccgac attcaattat tggatccaac cgagccttca
     2281 catcgcattt atattttgtt atctgaagat cgatttcaag ccgaagtctt ctcaacgaag
     2341 ctctctgaat cttctatgtt attggaggcg gttaaaggag gctatatttc aaaagacgga
     2401 aaagttcgtt tactcaaaaa agctgaaggt tggaaaattt actatgagtg agactaaaat
     2461 acgttgtgat tggtgtaaaa gcagtgaaat ttatatgaaa tatcacgacg aagaatgggg
     2521 aaaaccggag tttgacagcc tcaaactgtt tgagaaaatc tgccttgaag ggcaacaagc
     2581 cggactttct tggattacgg tgttgaaaaa acgggaagcc taccgccaag cattccatca
     2641 gtttaatcct gaaaaaattg ccaaaatggg tgaagaagaa attgatttgt taatgcaaaa
     2701 cactagctta atccaccacc gagcaaagtt agaagccatt ataaaaaatg cgaaagctta
     2761 tatcacaatg cagcaaaatg gcgaagactt cagtcggttt atttggtctt ttgtgaatta
     2821 tcagccgcaa attaatgatg taccaacact tgaagctgtt cctgctcata cagaaacctc
     2881 aaaagcaatg tcaaaagcgt tgaaaaaacg tgggtttgtg tttgtaggcg agactacttg
     2941 ctatgctttt atgcagtcaa tggggctggt taatgaccat ttgaataatt gcgtgttcaa
     3001 acataaataa acacaaaaaa ttaggcgacc atttggtcgc ctaacattaa ttcagattat
     3061 tgattgtttt gaacgtaatc aattgctgat tgaactgtag taattttttc agcttcttca
     3121 tctggaattt cgatatcgaa ttcttcttct aaagccatta ctaattcaac agtgtctaaa
     3181 gaatctgcac ctaaatcttc aatgaatgaa gcttctggtt ttacatcttc tgctttcgcg
     3241 ccaagttgat caacaatgat tttttttacg cgttcttcaa tgctcatttt gtttttccta
     3301 tagtgaatat cgcataagtg cgagagttaa atagtgtaat cgaaataagt ttaaatacaa
     3361 ccttttataa aaaggtcaaa ccagactatt cctatacacc agaatatatc tgtttttcca
     3421 ttctatcatt atgtttgtgt ttaatctata gagataaatc aaatttcatt tgattaccct
     3481 actttccgta attcatctcg catttgtgca atcactgctt gataatctgg ctggtcaaaa
     3541 atcgcagaac ctgccacaaa catatctgct cctgcggctg caatgtcggc aatgttattt
     3601 attttcacac caccatcaac ctctaagcga atgttataac cgctctcatc aatacgacga
     3661 cggacttctt tcaatttatc taaggtggac ggaataaatg attgtccgcc aaagcccgga
     3721 ttcacagaca tcaataaaac cacgtcaact ttatccatca cataatctaa atagctcaat
     3781 ggcgttgccg ggttaaacac caagcctgat ttacaaccta aatcacggat aagctgtaaa
     3841 tttcgatcta tatgttccgt tgcttcaggg tggaatgtaa tataatccgc tccggctttg
     3901 gcaaaatccg gaatcaaacg ctcaaccggt tttaccatta aatgcacatc aatcgggcat
     3961 tgaatgccgt aatcacgtaa ggctttgcag atcgccggcc cgaaggtcaa attcggcacg
     4021 tagtggttgt ccattacatc aaagtgaatt aagtctgcac cggcttttaa cacctctgcc
     4081 acatcatcac ccaagcgagc taaatcggca gataaaatag acggtgcaat taaataagga
     4141 ttcttactca tatttcctca ctatcaaaaa ataaatctac gttagattac cataatttta
     4201 acagcgaaaa gagtctctct tcctaaaaat ccgttttttt acaaaacacc ataaaaaagt
     4261 tatggaattg tatttaaagt tcgtatatta tgtatcccat attttaatta tggttaatga
     4321 ccttatctaa attctggaga aaatatgaaa aaagggattc atcctgaaaa ttatcgtgaa
     4381 gtgttgttct atgatgcctc agtgcaacaa ggctgggtta tccgttcttg tgcggcaacc
     4441 aacaaaacaa tggtatggga agatggcaaa gaatacccac tttacacctt agatacctca
     4501 tcggcgtctc accctgttta cacaggtaaa cgccgtgaag tgaatacaga aggtcgtgca
     4561 agtcaattta aagatagatt taaaggcttt gcttcaacgc tttcaaatca aaaatagagg
     4621 ataaaatgaa aatcttaaac tcacttaaaa ccgcaaaatc acgccacccg gattgccaaa
     4681 ttgtcagacg caaaggcaaa ctttatgtga tttgcaaaac caacccgaga tttaaagctc
     4741 gtcagcgtta aaaaccagca ccttaataag ctaatttatt aaggtgtttt ttatttcatc
     4801 ttctcaatat tacctatttt aaccacatca acgattttat tatttcttat tccatttagt
     4861 tatttgcaag cggtcaattt tccccttaaa tttgcaaaaa atttatttta ccaattaaaa
     4921 ggaaatgatt atgttgaaaa aattatcaat tgctgcatta gctcttaccc tttctgtttc
     4981 tgcatttgct aaagagagcc tacttgagcg tataaacaac aaagggacta ttactgtggg
     5041 tacggaagga acttatgccc cttacaccta tcacgatgcg agcggtaaat taaccggtta
     5101 cgatgtagaa gtaacccgtg cggtggctga aaaattagac gtaaaagtgg aatttaaaga
     5161 gacacaatgg gacgctatgt tagccggttt aaaaggtgag cgttttgact tagtggcaaa
     5221 ccaagtggct ttaaccagcc cggaacgtcg agcgacattt gataaatccg aatcttacag
     5281 ctgggacggt gccgccttat tagtgcgtga agatgaaact aaaatcaaaa cccctgctga
     5341 tgtaaaaggc gtgaaaactg cccaaacctt gagctcaaac tatggcgaga ttgcccgtga
     5401 aaacggtgca gacatcgtgc caattgacgg tatggctcaa ggcttactgt taattcaaca
     5461 aaaacgcgcc gatgcaactt tcaatagcca cttatcgcta ttagattact tgaaaaagaa
     5521 cccgaattcc ggcttaaaaa ttgtgtggga aaaagaagaa aaagtgggtg caggcttaat
     5581 tgcgaataaa ggcaatgacg aagcattagc gaaaatcagc aaagcaatcg tagaattacg
     5641 tgaagacggc acgttaaaaa aattgggcga gcagttcttc ggtaaagata ttagtgtaca
     5701 ataatccata ttggattagg cttggggcga attcgcccct tttattttta aatctccctc
     5761 aaaacgggag attttaggtt tttcagatgt taaacgatct acttctctca atccccttta
     5821 tgacccaagc tcgggtcgat ttagtgctaa gcggtttttg gccgatggta caagcggcat
     5881 ttttagtctc tattccgctg gcaatcgcct catttattat cggtatgtta attgccgttg
     5941 cagttgcatt agtgcgaatt agccctgcaa caggcttttt tcaccgcttg ctactgtggc
     6001 tggtaaaagg ttatatctcg attattcgcg gcacgccgat gttggttcag atctgtattg
     6061 tgttttatgg tttgcctgca atcggcattt ttatcgatcc gattccggcg gcaattatcg
     6121 ggttttcact caatatcggg gcttatggct cggaaacgat ccgtgctgcg atctcctccg
     6181 tgccaaaagg acaatgggaa gccggttata ctatcggtat gacttatatg caaacttttc
     6241 gccgtatcat tgccccgcaa gcgtttcgag ttgctgttcc gccacttagc aacaccttta
     6301 tcggtctgtt taaagatacc tctcttgcct ccgttgttac cgtaaccgaa atgttccggg
     6361 ttgctcaaca ggtagcaaat atgtcttatg acttcctacc tgtttatatt gaagccggtt
     6421 tgatttattg gtgcttctgc tgggtgctat ttttaattca ggcgagattg gaagtccgct
     6481 ttaaccgatt tgtggcgaaa taaggaggaa ttgtgcttaa aattcgcaat attcataaaa
     6541 cctttggcaa caacgctatt ctacgcggca ttgatttaga tattcaaaaa gggcaagtgg
     6601 tagtaatttt aggcccttcc ggttcaggca aaaccacctt tcttcgttgc ttaaatgcac
     6661 tggaaatgcc cgagcaaggc acattggaat ttagtggtaa tgctccgctg aaaattgatt
     6721 ttgccgtaaa acagagcaaa aaagagattt tagcgctacg ccgcaaatcc ggtatggtgt
     6781 tccaaaacta caacctgttc ccgcataaaa ccgcattgga aaatgtgatg gaaggaccgg
     6841 tatttgtgca acaacaagcg gtcgaaattg ctcaaaaaaa tgcaaaagcc ctgttagaaa
     6901 aagtcggact ggcggataaa gcagaactct acccgtttca actgtcaggc gggcaacagc
     6961 aacgggttgg cattgcacga gcattagcaa ttcagccgga gctgatgtta tttgatgaac
     7021 caacttcggc acttgatcct gagttagtgc aagacgtgct aaatacgatg aaagaactgg
     7081 caaatgaagg ctggacaatg gtcgtggtta ctcacgaaat caaatttgcc cttgatgttg
     7141 ccgatgtagt ggtggtaatg gacggcggtg aaatcgttga acaaggctcg ccacagcaac
     7201 tgtttaacca cccacaacac gaacgaacta aacgtttttt aaatcaaatc agagcggata
     7261 aataagaaac gatagcgcta gcgtccacgc tagtgctatc taataaatgg tacaagcggt
     7321 taattatgta taaattgtta tactgttttg gcacgagcgt ggacgctcgc gccatcgtac
     7381 agtaaaatca gctaacaagg ttccccataa aggataaata agacaaggct ccttaatctt
     7441 ttagattaag gagcttattt ttagatttta gaaatccgat ttaagccgca gcccatagtc
     7501 caccaaaaat ttggtagaac aagctattta gtagcaataa gccgaaacct agcaccatta
     7561 ccgagaaatc taacattccc gttcttggca ggagcttgcg gataaaacct aacaccggtt
     7621 cggtaatttg tgctaccgtg tagtctaatg ggtggttgcc ttgagtgacc cagctcatta
     7681 atgcacgaat caaggtggtg aaaaatagaa tttgtccgaa ggttttgacc acacttaata
     7741 agccgattaa tactgctctg ggtaaatcta cgccaaacag aataaactgt aacgttacca
     7801 aagcggcggc aattaatagt gccggaaagc aaatattttt aacggttgga atcagcttgc
     7861 caaccggtga aaccatcggt tcggtaattt taagtaaggt ttgtgaaatc ggtaaacgag
     7921 gatcaacccg acaaaattgc agccaagttc ttagcaccag cacaaaactt aaaaagccaa
     7981 caataagcga aataacagga gctaaaaatt ccatctcttt ttctctttct atacaaaaca
     8041 agcggtcgtt ttttagaaaa aatttgcaaa ttttcagtaa aatctgaccg cttgtatctt
     8101 attaaattaa ctaggcaaat taagcttgtg ctgggtagtc ccaccaaata tcaaataatt
     8161 cgctcacttg aacctctttt aagccgttag tttctaacca agttttcact aattggcggt
     8221 gagattcatc acatttgcct aatttttcta agcagactaa accttcccag tttaagtagc
     8281 cgttcgcttc aagggctaaa ccgtttggtc gaatcacttc atcgataaaa cgatctacgg
     8341 tttcatcaat ttggtcaatg cctgtgcctt cagcaaaggt gaatttaatt aagaaaccta
     8401 attcttggta ttcacctaag tgcatttttt tacgttggcg tgcgttacgt tgaatagcca
     8461 ttttttctct cctctatgaa taaatcattt ctttgtaaaa tataaatccc acaccccgtg
     8521 tcctaaacga tgccctcgct cttcaaattt ggttagcggg cggaaattcg gacgtggaat
     8581 aaaatcatta gttgctgatg tattttgcaa ctcgctctca aattggcgta atacttcaag
     8641 catatgttct gcgtaatttt cccagtcggt ggcaaaatga ataaagccgt tagggcttaa
     8701 ttttctgatc acacggctga taaattcagg ctgcacaata cggcgtttgt ggtgttttgc
     8761 tttttgccaa gggtctggga agtaaagctg taagccacct aatgtaccgt cagcaatgct
     8821 gtctcgcaaa atttcggtgg catcgtggca aattactctt aaattcttca cgcctttttc
     8881 taacgcataa gcgatacaag cccccacccc gggcgtgtgc acctcaatgc cgatatagtt
     8941 gcgattcggg ttttgctctg ccatttccac cagcgatttt cccattccga agccgatttc
     9001 taacactacc gggttgttat tgccgaaaat ctgctcaaaa ttaaagggca ttggctggta
     9061 atctaagcct aaatttgccc agttgttgtt catcatatca cgttgataat cgctcaaacg
     9121 accggtacgc aatacaaaac tccgcacttt tcgtaaataa cgcccatctt cggtaaactc
     9181 ggcttgctca acggttttac gttttttatc tgcaaaagtc tgtttttctg acattttctt
     9241 gccttaaaac ttcactaata ccgaacccca agtccagcca ccgccgaatg cttcaaggag
     9301 tagtaattgc ccacgttgaa ttcgcccgtc acgcaccgct tcatctaatg ccaccggcac
     9361 tgttgctcca ctggtattgg catatttatc aagggtaacc accacttgat ccatttccat
     9421 ctctaatttt ttcgccgttg cggtgataat gcgtaaattc gcttggtgcg gaatcagcca
     9481 atctaaatcg gatttttgta gattattcgc ttctaaggtt tcttctacca cgcttgaaag
     9541 ttggtttact gcaattttaa aggtggcatt gccctgcatt tcaataaagc cggaacgctc
     9601 ttcgccacgc ttttggcttc ttaaggttaa gttattttct aaatccggtg aggcgtgcaa
     9661 gtgggttgaa ataataccca gctcttcact cgcctctaaa atcaccgccc cagctccgtc
     9721 accaaataat actactgtgc tgcggtcggt ttcgtctaac attctggaat tgatgtctga
     9781 accaataacc aatgcctttt tcacttgccc gttacgcacg aattgatcgg caacagttaa
     9841 agcatacaca aatcctgtac aagccgctgc cacatcaaaa gcaatcgcgt cttcaatctg
     9901 aagcaagcct tgaatttggc aagctgcact tgggtaagcg tgggagttgg tagttgttcc
     9961 caccacaatt aaatcaatgt catttgcctc aattcctgcc atttccagtg cttgttgagc
    10021 ggcttttgcc cccattgttg ccactgtttc gtcaggctcg gcaatacggc gttcacgaat
    10081 gccggaacgg gttacgatcc attcatcaga ggtatcgacc attttttcta aatcagcatt
    10141 ggtacgcacc tttgtcggta aatagcttcc cgttgctaaa attctactat tcatattttt
    10201 attattctca atcaattaaa tgataatccg ttattatagc ttgaaaacca acaaatatat
    10261 aggctttaca agcggtcatt tttagcaaaa aagttgcatt cacgaacgat tttgcactag
    10321 aaccaccgct tgctagtatt tatttcgctt gagcctcttc gtatagccac ttcgctactc
    10381 gcttggcgaa ataagttaga ataccgtctg ctcctgcccg tttaaagcag agtaatccct
    10441 ccataatgca ctcacgctct ttcagccagc cgttttggat tgccgccata tgcatcgcgt
    10501 attcgcccga aacttggtag gcgaaggttg gcacgccaaa attctctttc acacgccaca
    10561 ccatatccaa ataaggcata cccggtttca ccatcaccat atctgcccct tcttgaatat
    10621 ccatcgccac ttcgtgcaag ccttcgttgc cgttagccgg atcgacttgg taagtgtatt
    10681 tattaccgcc ttttaagttg ccggcagaac ctactgcatc acggaacggt ccgtaataat
    10741 tagacgcata tttagccgaa tacgccataa tttgcgtatt gataaaaccg ttttgctcaa
    10801 gggcttcacg aattttgccg attcgaccgt ccatcatatc gctcggggca acaatatccg
    10861 cccccgcttc tgcgtgcgat aacgcctgtt ttaccaatac ttcagtagtc acatcattca
    10921 gtacatagcc tgtttcatca ataatgccgt cttgtccgtg cgtggtaaac gggtctaacg
    10981 ccacatcagt aatcacgcct aattccggaa attgagcttt taaagctcgc acggcacgct
    11041 gtgccaaccc ttgcgggtta taggcctctt ctgccatcag tgattttttc acatcaccca
    11101 ccacagggaa aagagccacc gcaggcacgc catatttaac cagttctgcg gcttcaacta
    11161 aaagctggtc gatagttaaa cgctctacac ccggcataga aggcacttgt actcgctgat
    11221 tttccccttc gatgacaaaa acagggtaaa tcaaatcatt aacggtaagt tgattttctg
    11281 ccactaagcg gcggctgaaa tcgtgcttgc gtaaacgacg catacggcgt aaaggatatt
    11341 gggattgaat tacttgcatt tttaatttcc taattcttaa aatacctatt cttgaaataa
    11401 gaaaggcata gcaaacaggt gctatgcctt ttcaaaatat tactgtgcaa cctgctctga
    11461 tggttcatca tcatctttgg ggcgataaaa ccgagcaaat agcacaccaa cttcaaacaa
    11521 taaacacatt ggaattgcca ataatgtttg cgagaaaata tctggtgggg tgagcaacat
    11581 accaattaca aatgctgcca caataatata agggcgtttt gcctttaaat cttcgggtgt
    11641 ggttacgcct gcccaacata acaagataat cgcaaccggc acttcaaagc agatcccgaa
    11701 tgccataaaa atggttaaaa cgaaatcaag atagctacta atatccgttg ccattgttac
    11761 cccttccgga gcggtagagg ttaaaaagcc aaatacaagc ggaaatacaa cataataggc
    11821 aaaagcgaca ccacaataaa acagcaatgt gctagatacc aataatgggt aaaccaaacg
    11881 cttttcctgc ttgtataaag caggggcgac aaacgcccaa atttggtaca aaataaaagg
    11941 aactgataaa aacaccgaaa ccacaatggt taatttaatt ggggtaaaaa acggagtggc
    12001 tacattggtt gcaatcattg ttgcaccgtc tggtaaattg tccgttaaag gtgttgccaa
    12061 taaggtgtaa atatcattgg cccagtaaac caatccgcaa aacaccaaga gcacacagat
    12121 aaaactacgc agtaatcggt ttctcagctc aattaaatgt gtaatcagag gttgagactc
    12181 atcaacttgc gacattattt gcctccgatt tctgcgctga ttctgatgat tgaggcgtag
    12241 ctaaatcatc atctggcgga tagtaagatt ccaacgttaa aagcgattcg tccatttctg
    12301 cttgttcagc cagctcatca gccgaaagtg gcttttctgt ccgcgtaaca ttaagttgct
    12361 cagataaact atccacttca agcggtttat tttgcgcatt tttttgcaat tcttgcgcct
    12421 ctaacacctg gctttcttgc tcgatttttt gctgaatttc tgcgacttgc tcatcggtta
    12481 atttaggaat tgtgctgctt tccgcagccg ttttttccaa ctcatttttt gcagaattaa
    12541 gcgaatcttg caactgggtg gctgacattt tcagatcttc caccgtttta tttaattctg
    12601 gcgaaaggga gcttaaattc aactcttctg cctttttaat gctctctttt aattcttgca
    12661 gtttcagctc ttgagccagt tcattttgta cgtttgcggc taaacctcga attgtactca
    12721 cccagcccat tacggtacga atcgcaatcg gcatacgttt cgggcctagc accaccaagc
    12781 ccacaatcat aatcagtact aattcagaaa aacctatatc aaacacggat taagcctgct
    12841 ctttctcttt tgctttctgc tctgctgaaa ttgcatcttt tgcttccact ttttcaaatt
    12901 cagcatcttt tttctcatct gccattgctt ttttgaagcc ttttacagat tcgcccaaat
    12961 ccgaacctaa agtacgtaat ttcttcgtac cgaaaagtaa tacgatgatt gcaaccacaa
    13021 tcagaagctg ccaaatacta ataccgccca taaaaactcc tttcatttaa tagggaatag
    13081 ataaaataaa acgctgttta ttatatgtta ctttgacata taaaaaagta attttgcaaa
    13141 aaatttgtca aaaacaaccg cttatttgcg ttgactcaaa atcaatacca gtggaaataa
    13201 agttaataac ggcacactta gccatatcgg caaagattca aatttccaaa atgcgccaca
    13261 gatcacaatc gctgaaattg acagcacaag aaaacggcta tttgcgtttg aattctgtgc
    13321 ttttaaactt tcgttaattt ccgctaaacg gaaattaatt tgcttttgct cttgtaaggc
    13381 tttaaacaat gcctccggaa actccgcaaa atgctcccga tattgcggta aacgttgctt
    13441 aatgtctcga accatcgctt tcacacctac ctgctcattc agccagtttt gtaaaaacgg
    13501 ttttgcggtt tgccataaat ccaactgtgg ataaacctgc ctgcccaaac cttcaatata
    13561 aagaagtgtt ttttgcaaca acaccaactg cggctgcact tccatattaa attctcttgc
    13621 cacattaaac aggttgagca aaacgtgtcc gaatgaaatt tccgataacg gcttagcaaa
    13681 aatcggctca catacctcac gaaaggcttg ctcaaattta tcaatatcgg tatccggcgg
    13741 cgtccagccc gattccacgt gcattaaggc aacacggcgg taatctcggt tgaaaaatgc
    13801 gacaaaactt tcggctaaat agcgtttgtc attgtggttc aacgtgccga caatcccgca
    13861 gtcaatgccg atatattgcg gattttccgg gtgttctctg ttcacaaaaa tattgccggc
    13921 gtgcatatcg gcgtggaaaa aactgtcacg gaatacttgg gtaaaaaata cctgcacacc
    13981 acgctctgcc agcaatttca tatcggtgct gttcgcttcc aactcggcaa tgttagacac
    14041 tggaatgcca taaatccgct ccatcgcaat caagttttta tggcaaaaat cttgatacat
    14101 ttcaggcaca tacagcattt cgctattttc aaaattcgcc cgaagccgaa tggcattgtg
    14161 catttctttg cgtaaatcca gctcgtctaa aatagttttt tcgtactctc gcaccacttc
    14221 aaccgcccgt agccgtttgc cgtcattcga taatttcggg ataaagtgag caatttcata
    14281 catcaactct aaatccgcct taatcaccgg ctcaatgccc gggcgaatca cttttaacac
    14341 cacatctttg cctgcaagcg gttgattttg gttaaatttt gccgtgtgaa cctgtgcaat
    14401 cgaagcagaa gctaaggcag tttcatcaaa gttttcaaac caagtttcaa gctttccgcc
    14461 caaagcctgc tcgataattt gacgagcgat tttgccgtca aacggttcaa cattatcttg
    14521 tagcaaggcg agctggtcgg caagctccgg tgcaaacaga tcacgtctgg tagctaacat
    14581 ttgcccgagc ttgatccaaa ccggtccaag ctcttgcaaa gccaaacgta aacgtacacc
    14641 gtaaggtttg tctgaatgtt gattcttcac ccaaaacaaa gccttacgcc ctagctttat
    14701 tttgcgggta attggcagat tcggaatggc ttcatcaata ccatagcgaa gaaaagtgcg
    14761 gataatatgg taaaagcggt tgagattttt gatgttcatt gaaatatata tttaatggta
    14821 attaggaaga ttttagcaaa attctgtaaa aatttaaccg cttgttgggc tactatgggt
    14881 atttctgctc aaaattctca atttctttct gtacttccgc aataagtgtt tgttcagagg
    14941 ggaggtaaag ttggtattgg ctggcaaaaa ttttattctg attttccggt agcgaaaatt
    15001 ttaccaccgc atcattttta tcggcacaaa gcaagacacc aatagtggca ttttcgtgcg
    15061 gcagtttttc aactcggtca aaataattga cgtacatctg taattgcccc aaatcttgat
    15121 gggtgagctt gtgggtttta atttcaaaaa tcacaaaaca ttgaagtaaa cggttgtaac
    15181 aaaccaaatc gacaaaaaaa tcatcaccgt ctaggtgcaa acgcttttgg cgtgcgataa
    15241 acgagaaacc gttacccaat tctagtagaa aatcctgcaa atgcgtaatg atggcttgct
    15301 ctaaatcctt ttcgtaataa gcactttccc gttttagtcc gagaaattcc aataccatcg
    15361 ggtctttaat gagctgtttc ggatcaaccg gctgctgctc atttctggca acagcaagca
    15421 cactttcctt atcattactg agcaataatc gctcgtatag actactatta atttgccgtt
    15481 ccagctggcg tgaactccaa ttattcttac aactttcagc caaataaaat tcccttttgt
    15541 cagaatcgga gatttgaatt agacgacgat attgtgtcca attcaattgc gaccgcagtg
    15601 cggtcgcaat tggaaacgca cgataaaact ggcgataacg ctctaattga cggctacaaa
    15661 aaccacttcc aaattctggc tcaagctctt ttgcgagcat tttaatcagg tatgttccat
    15721 aatcagcacg ctcttgccct tgttgctcct gttcaaaaat ccgttttccg atgtgccaat
    15781 acatcagcac acgttggaaa tctaccgcac gaaccgcatt ttcacgagct tgagcaataa
    15841 tttgtttaat atcttagatc atcgttgttt ctattaacat aaaagcctcc gttttggatt
    15901 aagtttatgc ttaatctatc cggaggcaat ttctttcact caacttttcg agtcatatca
    15961 caattttatt ttgttaaatt taattttgca caaacgcttg cgtttgaaca tcagctttgc
    16021 tgatggctcg aagagcgaac gtagtgagta aatttttgct ctaatttgag cgcttgttgg
    16081 gcaagttctt cgacttggtc atagaaatgc accgcctgta aacgatgcac caacaccggt
    16141 ctttcttgga ttaaattctc aaccaaatgt tgattatttt gctcaaattg agcttttact
    16201 ttacctagca attttttagc aagatcggtg ctagtttgag ccactacatc gccaacaaaa
    16261 ggggaaagca gttcggcagg gtctttttcg agctgttcaa gtaatgcagt gaaatgttgc
    16321 aacacttgaa tatcgcccgt cagcaccaac gatttattat taatcagctc ggttaatttt
    16381 tgcttatccg ctagtttcgg cagggtgtca aatgccagtt gcaccgtaca atctgcttcc
    16441 ccctcgtagt tgccaagcca atcggttcgg ctttcgctaa acaacacaaa aaagtcgatt
    16501 ttaggcgaag ttagggcgat ttttagcact tttccggaca atttacgcaa attcggctca
    16561 atatgaggcg agcgtttaag taacgcatta aaagcggttt caatcagacc aaaggtaaat
    16621 tgcgggagca ttaattgttg ttttacatta tttaacattc gtacctactt accctcttca
    16681 cttttgggag aaggatagat tgttcttcat taagaagcaa aatcagggag aggggtattt
    16741 gcaaaatatt gaataaatat gaccgcttgc cccctctctc tgcttatttc gctaaacgct
    16801 cataagcggt ctctctccca caaagggaga gagtcattta agagaaaact aaaatttata
    16861 acctctgtgt aatgccacaa tgccggcact taagttgtag taattcacgc tttcaaagcc
    16921 agtttgttcc atcattgctt ttagctcgtc ttgtttcggg tgcattcgga tcgattcagc
    16981 taaatagcgg taactttcgg cgtcatttac caccacttcg cccactttcg gcaaaatatt
    17041 gaatgagtag aaattataaa gctggctgat tgggtcgata atcggttttg agaattccaa
    17101 cacaagtaag cgaccgcccg gttttagcac gcggaacatt gaacgtaggg ctttgtcttt
    17161 gtcggtaaca ttacgcaagc caaaactaat cacaatacaa tcaaaagtgt tatcagcaaa
    17221 aggcaagcat tcggcattcg cttgaacgta gctcacattt ccaaccacgc ctaaattgcg
    17281 taatttttcc cgcccgactt ccaacattga gctgttaata tcggctaaaa tcacctcacc
    17341 actttcacca acaatgcgag agaattttgc ggtaaaatca cccgtgccgc cggcaagatc
    17401 cagcactttt tgccctttac gcacgccact gcaatcaatg gtaaagcgtt tccacactcg
    17461 atgaatgccg aaagaaagca aatcgttcat taggtcatat ttgcctgcca ccgagtgaaa
    17521 cacatttgcg accagttgct gtttttcttc tttcgctacg gttttaaacc caaagtgggt
    17581 ggtttctgcc gattgttgca cttcttgttg cacttcatct ttaggtgcta attgttctac
    17641 atcgctcatt ttcttgtctc tagttgcaaa atttaggcgt aaccatagca aaaaagcggt
    17701 cgtttttctt taactttttg caaattttct taagtaaata accgctttct tgactagaaa
    17761 agccaaattc tgtaacattc gcacactatt ttttcttgag gattacacat tttggacagt
    17821 catagtcgat acttacccgt ttaacctatc ttgtctaacc tcaatgttac cgacaaggtc
    17881 ggtaatgctc gcctagtatc tttgttcctt tttgttccaa gcctcctaac tatttggagc
    17941 taaacatgat ccgtgctttt ggactagata acgcatgttt aatcagcgtt gatgaaacta
    18001 acccaacttt attaaatgat gcgatttgga ttgatctcat cgatccatca gaagctgaac
    18061 gaaccgtatt agaaaaccgc ttagaccaaa cactcgctga agaacgtgaa ttggaagact
    18121 tagaggcgtc tgcccgtttc tttgaagatg aagacggttt gcacctgcac tcgttctttt
    18181 actgcttaga tgatgacgat tacgccgata ttgccactgt cgccttcact attcgtgacg
    18241 ggcgtttgtt taccttgcgt gatcgggatt tacccgcatt tcgcttgtat cgaatgcgtt
    18301 cccgccgtga gaaattgatt gacagcaacg cctatgaact cttactcgat ttatttgaga
    18361 ccaaaatcga gcagcttgca gacgtaattg aagaagtcta tgctgactta gaaaaattaa
    18421 gtcgggttat tctaaacggt cagcaagaaa atgagaattt caatgatgcc ctttctcgct
    18481 taactgaatt tgaagatgca agttcaaaag tgcgtttatg tttgatggat acgcaacggg
    18541 cgttaagttt cttactgcgt aaaacccgtt tgccgaataa tcagctagaa caagcccgtg
    18601 acattatgcg agatattgaa tctctgcaac cgcacaatga atccttgttc caaaaagtga
    18661 attttttaat gcaagcggca atgggttata tcaatattga gcagaaccga attatgaaat
    18721 tcttctcggt ggtgtcagtg atgttcctac ctgctacgct ggttgcttct acttacggta
    18781 tgaactttga atttatgccg gaacttcatt tccaatatgg ctaccctatg gcgattggtt
    18841 taatgattgt tgccgcctcc gccccttatc tttattttaa acgtaaaggt tggttataat
    18901 ttatttttaa agcctatagt tgaataactt aggctttctt attttaatga atatgttcac
    18961 ctctaaaaac aaataaagat taaaactgtt tacctattat ttattcacat atatactgtg
    19021 agatattctt ttcataggca ggagatctat tatgctaagt aagctacaac gctttacctt
    19081 aatgataaaa agcaccatca ttaagcatcc actggaaatt ttattcgtta cttacgtcac
    19141 gattttactt atcaataatg tgagcgacta cgaattaatc aaacgctttc aaaatctaat
    19201 tgctcttttt cctatttgct ttattttgct ttacctgata cgcgatacca aagcttattg
    19261 gctattcgct ccgattccga tagcaatcgt ctttttcttt ggtcaaatta atttaacatt
    19321 attggaagat tctcgttatt gggctaccat attttgtgta ttcctttgtt tgatcagtca
    19381 atattggtac aaaaacaacc attattttgt agccggaaca actaataaat tagttaacat
    19441 tgtctttgct acagttttat ctggcattat ttttgcaaca ttaagcgcta ttaccatagc
    19501 cattattgct ttatttgatt taaataaaca aaacaacttt catatttttg aaaaatttgg
    19561 cattttttct agtttttggg cattccctgt tttattttta actcttgaac aacagactac
    19621 caatgattct agatatctaa accgcattag tgaaatgtta ctaaactgga ttttgtctcc
    19681 ggcattaatt atctatactg caattattta tgcttatgta atttttattg cggctaaggg
    19741 gcaaatgcca gatggggttg ttgcaaacgt agcgcttccc tatttagctt tcggcctagc
    19801 tatacaagcg gtgcaattat tactaaaaaa tgcaaaatgg cagtggtttt attctcactt
    19861 tacctattta gcacttttgc cgttaacatt aatttggtat gccatctata ttcgtttcag
    19921 ccattatggc ttaactgaag cccgtattta tttagtgatt ggcacaataa ccttatctat
    19981 ttgctatacc ttattactat ttaaacagtt ggcgcaatat cgtctctttt ctgcagtgtc
    20041 gatagcaatt attttaattt cagtgtttat tttagatccg aaaacagttg cgcttaaaga
    20101 tcaaaccaag cggttggaca actatttgct aaaacacaaa ttattagatg taaataacaa
    20161 aatcagcaca aaagctgtac ttaaatacca agaatcatta aatgaaaacc gagatgaagc
    20221 cgaatatttt tattcaatgc tccactatgt tgccagagga atgcctgctg cacaatttaa
    20281 agagaaatat ggcgtaaatt caagctacga tttaatgagt gaaataagag aaagaaatac
    20341 tgacccacgt tattttgaag ctactaattc tgagctggtt cgcttaacta aagcagatat
    20401 ggcaaatgct cgtgaatata ttacatttag tagccaatta tatcggccta attcattttc
    20461 ccatcaaaaa atagaaaata agctatgcca aaaacgcctt tctcaaggtt actattttga
    20521 gggaaatata ttaaatattg agtatcaata ctcagaaacg gctcaagact gctcttcaat
    20581 aacacaagat cctactgaat ttgttatcta ctttaaagga cttgggacta ctattgaatt
    20641 taacattaac gatattttga aaaaaatctt tgctaaacat cagttatcta ttacccagca
    20701 acacaaaaat gaggttttag aaaagattaa aggcgattta ctcaaaatgg atttaggaaa
    20761 ttcagtactt gggcttaagc atattgagtt aagatttgaa gacaatatcg gctatatagt
    20821 agaaagtatt agtacacaat atattatgct gaaataaaag gagatgctcg ttcaattaaa
    20881 tttgaacgag catttttcgt taaaaactca atttaagcag ccactcaaaa ttagtctcat
    20941 ttaaccgata ttgcggtttc aaattcgggc cgcaagagtt tgagccaatg ccgctcattt
    21001 tgtaatcgac acacagcacg gtggaagggc tttctaccaa atcataactg tggcttttag
    21061 tggttagctc ttcctgtgtg taaggcgaaa gattaaaact aaacggctgt ggagaagtaa
    21121 cagttatccc atttgcttgc acataatgcg taccgaaatg gctgccgttt tcctgcggtt
    21181 tgagataatc ggtatgattt tctcgggcgc tggtttgata agctccgagt ttcgccaaat
    21241 ggtatttgtc gatataactc tcctgctcgc catagccaaa atagctcact tggttattcc
    21301 gtttattcaa gaaaaaccgc aagccaaagc gaggtaaaaa cggcaaatga gcggggcggg
    21361 ttgcctgaac ctgaatcgtc atttcgccat tcggggcaag atgataattc actttcaggg
    21421 ttaaaatccg actttgagcg gttgccacaa tgccacattc ggcagtaatg tttacgccgt
    21481 ttttatcttg catcagttcg gtatgatacg ccctggtgta acagttatcg tagccggctt
    21541 ttttccaaaa ctcacgaatt aagcggtcgt tatcggttgg ggctcgccaa atattgaaat
    21601 ccaacggttg ctcaattact gcctcgccgt ttttctcaat ccggctgaaa atgcctttga
    21661 gtttatcgaa agtgtagcga tagtcgccct gttgaatccg ccattcattt gcaaaatctt
    21721 gcacaaaaat gaccgcttgc gggcgtggat taagtgctgg agtgaccatc gcttgatgca
    21781 gcgtgatttg gtcaaagcct aagtgatgcc ctttttccaa cagagccgtg ctttcattta
    21841 aagaataatc aagggttaaa agttgcaatt tgccgtttgg ttcgggcagc gttagcggca
    21901 aacaagcggt ctgatttggc tgacaattta ccaaacattg tccctgcagg gtggtttcgc
    21961 cgttttcgct gaaacagtaa tgcacggtca gataatcagc taagtcgctg aaatccaact
    22021 gatttttcag ccaaattttg cccgctttta actcagctcg caccgggcga ttcacatttt
    22081 tcacttctaa caaattagag tgtggcacac gctgttggga aaccaagccg tccatacaga
    22141 aattgccatc gtgcaaggtt tcgccgaaat caccgccata gccgtatttt tcggtcttct
    22201 gttcggcact tagctcagag ttggggagca gaggagcatg gtcgcaccat tcccacacaa
    22261 agccaccgca cgcaccgctg tagcgttgga aggtttgcca ataatcttcc atatcaccac
    22321 tcgaattgcc catcgcgtga gaatattcac acaaaataaa aggtttgtgg ttggcaaagt
    22381 cggaaaaata ttcctctaac cgctcggtgc ttgggtacat ctcgctgtat aaatcgaggt
    22441 ttgaaagatc gttttgatgt gccgaatgtt ggtaaatcga accttcgtag tgagttaaac
    22501 ggcttggatc ccgttgtttt acccaacggg ctgcgacttc aaaattttca ccaaagccgg
    22561 attcgttacc aagtgaccaa ataatgaccg aagtgcggtt tttgtctcgc tccacattgg
    22621 caatgttgcg atctaaaatc gcctgtttga acagcggatc tcttgcaaaa taacagaaat
    22681 tatcgaccgc ttgttggcga atttcttcct gtttgttcgg gtttggcaca ttcaggaaaa
    22741 tgctgttttc cggactttca atatacactg cactggagcc gtgagattca agatcacttt
    22801 cggcaatcag ataaaaaccg agctgatcgc acaattcact aaaccacgga gcgttcgggt
    22861 aatgggcggt gcgaatagcg ttgatgttat gggctttcat taagcgtaaa tccaccaacg
    22921 cttgctcacg gctaatgctg tagccggttt tcgggtcgga atcgtggcgg tttacccctt
    22981 taaatttaat cggggcgttg ttgaatagca tcacgccatt ttccacacga atctgacgaa
    23041 agccgatttt ttgctcaata atttcgtttt ggtagctcaa gcatagcgtg tagagtgtcg
    23101 gatcttccgc attccacaaa cacaaattgc aaatttcttg gcaaaaatca ccgcttgttt
    23161 gctcgcagac taagcggttt tcagggtcga aaagttgaaa atgcacagct tcggtgtagg
    23221 tggaaaattg tgtttccacc ttgagttctg cctttgaaag atcagcgttt aactggtagc
    23281 ggataaagaa atcttgcagg tagttttgct cacgttccaa aatataaaca tcacggaaaa
    23341 tgcctgacat tcggaatttg tcttgatctt ccaaataact gccgtcacac cattttagca
    23401 ccaccacgac gaggctgttt ttgccctgtt taagctgttt ggtgatgtca aattcattgg
    23461 tgctgtggct gatttgcccg tagccgacaa attcgccgtt tacataaaca aacaggcacg
    23521 aatctacgcc ctcaaaattt agcaaatagc gtttgttagg cttggggtta aacgtgattt
    23581 cacgctgata caccccgcaa gggttttggt gtggcacata aggcggatca aacggaatcg
    23641 ggtagttgat gttagtgtat tgatgggcat caaagccttg agtttgccag ttagacggca
    23701 cggggatttg gtgggtaaat ttggtgttga ggaaatcctc cggcagatcg tgcggacttg
    23761 gatagaaatt aaacttccaa tcgccattta gcaaagtaaa taactcagat tgttcccgtt
    23821 ccaactgatt cggcgtttgc cctttagcaa aaggaataaa ataagcgtgg tgtagcgtgg
    23881 tattaaggtg caacacactc gggtcttggt agtaattcgg taacgacata aaagccctat
    23941 gatcaaaaag atataaatac gaatacactt taattctctt ataaaatagg gcaatcaact
    24001 atgtgaaaaa ttgtgaggcg gatcacaaaa taatttcctc acctttttcc ttcgattccg
    24061 ttataatcac aagaattttt tatgtcattt ttcaaggaat ttaccaatgt tatatccaag
    24121 cgaagaattt ttatatgcac cggttgagtg ggttgatcac agcgaaggtt acaccgatat
    24181 tcgttaccat aaatcaaaag acggtatcgc taaaatcacc attaatcgtc cggaagtgcg
    24241 taatgctttc cgtccgcaaa cggtaaaaga gatgattgaa gccttttctg atgcccgttt
    24301 tgatgaaaaa atcggcgtca tcgtattaac cggtgaaggc gaatatgcgt tctgtgccgg
    24361 cggcgaccaa aaagtgcgtg gcgattacgg cggctacaaa gatgaaagcg gtgtgcatca
    24421 cttaaatgtg ttggatttcc aacgtgatat tcgtacctgc ccgaaaccgg tggtggcaat
    24481 ggttgccggc tatgcgattg gtggtggaca cgttttacat atgttatgtg atttaaccat
    24541 tgccgctgac aatgcaaaat tcggtcaaac cggcccgaaa gtggggtcat ttgacggcgg
    24601 ttggggtgca agctatatgg cacgtttagt cggtcagaaa aaagcgcgtg aaatttggtt
    24661 cttatgccgt caatataatg cacaagaagc gttagatatg ggcttaatca ataccgttgt
    24721 gccttatgct gatttagaaa aagagactgt gcgttggtgt cgcgaaatgc tacaaaacag
    24781 cccgattgcc ttacgttgct taaaagcagc attgaatgca gattgtgacg gtcaggctgg
    24841 cctgcaagag cttgctggta atgcaacaat gttgttctat atgacagaag aagggcaaga
    24901 aggacgcaat gcgttcaacg agaaacgtga gccggacttc agcaaattcc gccgcaatcc
    24961 ataattgacg gcaaatacaa gcggttcgat tttgcaaaaa atttgcaaaa atcgaccgct
    25021 taccttttct aatttaagtt aattttatgt cagatgttga gttaaacgag cagagcgagc
    25081 aagagcctga gcaaaaaccg aaaaagcgaa actatttcct ttcaacctta ttcaaaatcg
    25141 gggtgatagg agcttgcagt atggcttttt acggcattta tttagacggt aaaatccgta
    25201 gcaaaatgga tgggcagata tgggaattac cagctgaggt gtatgctcgt attgaaagca
    25261 ttaaaattga agacaactta acgcttgagc aaaccaaaca agcgttgctg gataacggct
    25321 atcgtcaagt ttctcaagtt gcgacaccag gcgatttcaa aattgaagaa aatcagctgg
    25381 tgttgctacg ccgagctttc ccgtttccag aaacaccgga atcgcaacga gtgcttcgtt
    25441 taactttcaa acaagataaa ttaacttata ttgaagattt ggtgcagggt aagttgatcg
    25501 aggagttccg cttggatccg aaattactgg cgttactgca ttccgatagc gatgaagaac
    25561 gtcaagcatt acgcttacaa caataccctc gcttgttaat tgagtcactg attttaaccg
    25621 aagatcgccg cttttatcag cacgatggga ttagcccaat cggtattgcc cgtgctttaa
    25681 tcactaacta ccaagctggc agaacagtgc agggtggcag taccttaacg caacagttag
    25741 tgaaaaactt gttcttaagt aatgaaagat cgttggtgcg taaggtaaat gaagcgttaa
    25801 tgtcggtgat tttagacttc cgttacgata aaaaccgcat tttagaaacc tatctcaacg
    25861 aaatttattt agggcagaac ggtagctacc aaattcacgg ttttgcattg gcaagccaat
    25921 tctattttgg tcgtccgatc caagagatta gcttagacca aattgcgtta ttggtgggaa
    25981 tggtaaaagg tccatcactg tataacccgt ggcgaaatcc gcaaggtgcg gtagagcgac
    26041 gtaatgtggt gttgcgatta ttgctggatc atcaagtgat caatcaagaa ctttacgctc
    26101 tgttaagctc ccgcccgctt aatattcgtg aaaaaggcac gatttaccgt gagcaacctg
    26161 cctttatgca ggcattaacc attgatttga aaaatgagtt aggcgaaatt aagtcagctc
    26221 aactttccgg tactaaaatt tttacgaccc ttgaccgtaa acagcaacgt tcagccgaac
    26281 aagcagtgat taccggtttg gaagatctgg aaagtaaaaa taaaaaagtc agcgatttgc
    26341 aatcggctat tgtcgtggcg gaataccgca caggtaaagt gagggcgata gtaggagacc
    26401 gcttaaccca atttgccggc tttaaccgtg cgattcagtc aaaacgccaa atcggttctt
    26461 tagtcaaacc atcggtttat gcgattgcct tggcacagcc tgaattattc cgtttaaata
    26521 caccgatcca aaataaacaa atttcaatta aggttggttc aacctactgg acaccccgta
    26581 actacgaccg cagttttagt ggctcggtga tgttaatgga cgccttagtc cgctctctga
    26641 atattccaac ggtgaatatt ggtatgaaag ttggcttaaa aaaagtcatt gccaaacaaa
    26701 aagagatggg ctgggataat gcggaaattc cgccttaccc atcaaccttg ctaggttcat
    26761 attcgatctc gccttacgat gtaacccgct cttatcaagt aattgccaac gaagggctga
    26821 aaacaccatt aaccaccatt gaggcgatta tttcgcacaa tggcgaaatg ttctatcagc
    26881 gagatagcgg caaagtgagc gagcaggtgc ttccaccgga agctgcggtt caaacaatgt
    26941 atgcgatgca acaggttgtg gaacgaggta cggctcgtag cttacaaaac gattttgcca
    27001 aactgaaatt agccggcaaa accggtacaa ccaataacgc tcgagatact tggtttgtgg
    27061 gaattgatgg cgaacacgtc acaaccgtct ggctgggtaa agataacaat ggggatacca
    27121 acctcaccgg ttcaagtggt gcattgtatg tgtataagca atatcttgag agagccttgc
    27181 ctcaggcgta tagattaccg aaacttaata cgatgcaatg ggtggggatt aatagctatg
    27241 gtagctggaa ttgcgatagt ggcagacaaa ttccagtttg gcgagataaa gggcaacgtt
    27301 attgtaccag tgcaggtaat gtagtggcta cagaaaaacc aagtgtttgg gatgcacttt
    27361 cgctgaaaaa agaaaatatc gaggctaaag cagaagaagc tgaagggaag caaccaatcc
    27421 ctactgaaga agttgcacca attgaataaa aataaatttg atagccatta tcattcaaga
    27481 tacacaagct gatagattct acctataaaa agtatatatt ataactattt gctagttttc
    27541 attttggatt gtaatatagt aataaattaa ataagcagta tctaatttaa t
//
LOCUS       DANLXD010000024        26580 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.024, whole genome shotgun sequence.
ACCESSION   DANLXD010000024 DANLXD010000000
VERSION     DANLXD010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 26580)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26580)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26580
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.024"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            131..409
                     /gene="ftsB"
                     /locus_tag="PXD18_000820"
     CDS             131..409
                     /gene="ftsB"
                     /locus_tag="PXD18_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HDL6301272.1"
                     /translation="MRLLITFFALLLGFFQYSFWFGKNGWSDYQEVQEEIALLKVENT
                     KLTSRNKLIEAEIYDLKNGVDALEERARLEREMVKENEMFYRIVPKNK"
     gene            427..1110
                     /gene="ispD"
                     /locus_tag="PXD18_000821"
     CDS             427..1110
                     /gene="ispD"
                     /locus_tag="PXD18_000821"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HDL6301273.1"
                     /translation="MKRKIIAVIPASGVGSRMQAEKPKQYLQLKGKTILEHTVSIFLE
                     HPHVEKVIVAVARKDPFYSTLELLKSPKIQLVFGGETRADSVLNALQEINTENAWALV
                     HDAARPCLKRSDLDKLLQINDPQGGILAIPAVDTMKRANGTKIAHTEDRSTLWHALTP
                     QFFPAQALKQALSSAFANKLQVTDEASAMELAGYQPQLVSGRSDNIKITRPEDLALAE
                     FYLTHNLEN"
     gene            1112..1591
                     /gene="ispF"
                     /locus_tag="PXD18_000822"
     CDS             1112..1591
                     /gene="ispF"
                     /locus_tag="PXD18_000822"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HDL6301274.1"
                     /translation="MIRIGHGFDVHAFGEDRPLMIAGVEVPYHTGFIAHSDGDVALHA
                     LTDALLGAAALGDIGKLFPDTDMQYKNADSRGLLIEAYRQVQEQGYQVGNVDVTIIAQ
                     APKMRPHIDKMRQVIADDLQCDISQVNVKATTTEKLGFTGRGEGIACEAVALLLKRA"
     gene            complement(1706..2563)
                     /locus_tag="PXD18_000823"
     CDS             complement(1706..2563)
                     /locus_tag="PXD18_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HDL6301275.1"
                     /translation="MMKSLCKFLSIFNRLLLVCLALFSLNATAVTYPEPPNPFYYITD
                     YTKNTLSQQEWRTLEDALIANCAKTSSQIAVVIIPSTEGEAVSTYAHTLFNKWGIGRS
                     KNNENNGILLLIAKNDRKLFIATGRGLEGALPDAIASSIIRNDITPFFKQEQYAAGIA
                     HGLSAIMAAINGEYAPYASYGEEMQEFDDIDGLLFFLFAGIVIFLIFRPRGNSTYISP
                     SSMDQLGQILRESQRRGGGFGGGLGGGFDRGSGGFGGGFGGGFGGSRGSGDSFGGGSS
                     GGGGAGGSW"
     gene            complement(2560..3018)
                     /locus_tag="PXD18_000824"
     CDS             complement(2560..3018)
                     /locus_tag="PXD18_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HDL6301276.1"
                     /translation="MGLFSFLSNKLPIDTQRIEQAIADLEQKTSAELRVVVERKAKIG
                     KTDNAAMLRASELFDELKMRETAEHNGVLIYLSFKPHYAAIIGDEGIHQKVDNDFWQK
                     IYATMCLDCQQGDYTQAICDAIKMVEAPLAHHFPYQADDKNELSNEVVVK"
     gene            complement(3100..3684)
                     /locus_tag="PXD18_000825"
     CDS             complement(3100..3684)
                     /locus_tag="PXD18_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HDL6301277.1"
                     /translation="MKKIFWILLIAMLAVGGYSLTKYNDLMRAEEDINSVWGNVESAY
                     QRRADLIPNLVNTVKGQANFEKETLTSVIEARAKATAVTIDPSNATEEQMAKFQEAQQ
                     GVNSALSRLLVSVEKYPELKAHEAFLNLQAQLEGTENRINVERNNFNEKVKEYNKQVR
                     EFPTKLAAMIMGFKAKPQFKSEAGSDKAPTVNFN"
     gene            3862..4725
                     /gene="rarD"
                     /locus_tag="PXD18_000826"
     CDS             3862..4725
                     /gene="rarD"
                     /locus_tag="PXD18_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDL6301278.1"
                     /translation="MLKGILASLAANVLFGAVYYFAILLRPLEGEAMFGFRIVVVIPF
                     ILLAIILFKQQSAFADLLQKIRQNPPLVLVILLLALNTGVQLWLFLWAPNHGQALQVS
                     FGYLLLPIVAVALGKMVFKEHFTRLKWLSLLFAVIGVGSSLFFNSTISWATWVAGLGY
                     PLYITLRRYFQINTLATFFVELLLVLPVALYYLSQVEMTPIVAENPQIYFYLGLLGLV
                     SGSAFILYILSSNLLPINVLGLLGYVEPLVMLLISFAIGEKLDANSYILMVCLLVSIG
                     LLSWDSFRSKV"
     gene            complement(4878..5396)
                     /locus_tag="PXD18_000827"
     CDS             complement(4878..5396)
                     /locus_tag="PXD18_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lhr family helicase"
                     /protein_id="HDL6301279.1"
                     /translation="MILLRGDTMQFIEFTDPDSGISYQYSEFTIANVAFIINFCSDAD
                     VISTLSALGKDITNYINTYSCCTIKFMAKEHLENSGSNIDIYAPAANHQFKRKEIIAL
                     QETLERLLFEHYVRFTPESYLFIAERDSLNRMYQRMCVPRCDFMQSFQVVYPLGVNQD
                     CFILITPKGNLK"
     gene            complement(5563..7227)
                     /locus_tag="PXD18_000828"
     CDS             complement(5563..7227)
                     /locus_tag="PXD18_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDL6301280.1"
                     /translation="MNISFVFPQTLGNARRFLVNEMLSAAAKQQGHNVVAANQADFVV
                     LFDNAIPQEAAGKQGAILDLEQAFAQPEASLKQAVENAQTFANATATTAVSAVSSGVK
                     NIVAVTACPTGVAHTFMSAEAIENYAKAQGWNIKVETRGQVGAGNPISAEEVAAADLV
                     FVAADIDVDLEKFKGKPMYRTSTGLALKKTTQEFEKAFAQAKIYEGGVAKADNAEAPT
                     SEKKGLYKHLMTGVSHMLPLVVAGGLLIAISFMFGIEAFKDETIAGGLPKALMDIGGG
                     AAFHLMIAVFAGYVAFSIADRPGLAVGLIGGMLATTAGAGILGGIVAGFLAGYTVKFL
                     NGAIQLPASLTSLKPILILPLLGSAIVGLLMIYVINPPVKALMDALVEWLNTMGQTNA
                     IILGIILGAMMCTDMGGPVNKAAYTFGVGLIASQQYMPMAAVMAAGMVPPIGMAIATL
                     IARSKFNTNQRDAGKASFVLGLCFISEGALPFVAADPVRVIASSILGGATAGAISMAL
                     GITLQAPHGGLFVIPFVSQPLMYLAAIAIGSLVTGVVYAAIKQKAE"
     gene            complement(7253..8197)
                     /gene="fruK"
                     /locus_tag="PXD18_000829"
     CDS             complement(7253..8197)
                     /gene="fruK"
                     /locus_tag="PXD18_000829"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HDL6301281.1"
                     /translation="MRIATVTLNPAFDLVGKLQRIEIGEVNTVETLGLYPAGKGINVA
                     KVLADLGTKLSVTGFLGEENQGDFVNAFKHNDLADEFYRINGKTRINVKITETEADVT
                     DLNFLGFEISESDWEKFVTLSHQWESKFDLVAVCGSLPRGVTPEKFASWLESLHRQGL
                     KVVLDTSNAALTAGLTAHPWLVKPNRRELEVLVGHSLNSIEEIISAAKQLRSRGIENV
                     IISMGEQGSLWLNHEGVLQARPPRCENVVSTVGAGDSMVASLIYGLSQGWSKEQTLRF
                     ASATSALAVVQSNVGIADRAALDDIIKQTDITVISENH"
     gene            complement(8211..9689)
                     /gene="fruB"
                     /locus_tag="PXD18_000830"
     CDS             complement(8211..9689)
                     /gene="fruB"
                     /locus_tag="PXD18_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused PTS fructose transporter subunit IIA/HPr
                     protein"
                     /protein_id="HDL6301282.1"
                     /translation="MLNLSAKNIRLNGSASNKEEVIRFVAAELVAKGNVAAGYEVGML
                     NRETQTSTFLGNGIAIPHGTLDTRDLVKETGVQIIQLPQGVEWGEGNTAYVVIGIAAK
                     SDEHLTLLRQLTTVLSDEEAAATLAKTQNLDEFIAVLSGKKNLPALSQELISLNIESS
                     SPITLSAINAAKLQEQGYVSQAFISDVVANKALHLGNNLFVVDSAKGNQANGIAIARN
                     TQGQTLLTVAETDNALQPLLTQLLKPEVRSQFAHFSAEQMLGLLKGESVASTPVTNVE
                     ASGNQVVGTFTIRNDNGLHARPAAVLVQTVKPFSSKISVENLDRNTAPASAKSAMKVV
                     ALGASQGHRLRFVAEGEDAQQAIEALQQAIINGLGESVSFVPAVADTIESIAVSAIPA
                     EETATAVDANTKEATFVIKNEHGLHARPSAVLVNEVKKFNAKIEVQNVDKNSPLVSAK
                     SLMKIVALGVTKGTTLRFVASGDDAEVALAAIGAAIEAGLGE"
     gene            9977..12199
                     /gene="glgB"
                     /locus_tag="PXD18_000831"
     CDS             9977..12199
                     /gene="glgB"
                     /locus_tag="PXD18_000831"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HDL6301283.1"
                     /translation="MQDYTYSEKDAFFVERLSSGSCNDPFSYLGIHPSNNGVIIRVFL
                     PSAIACQVIDLNGKPVSSMLKIDDRGFFIAELIGKKTDFSYRLLVEYPDSTVDIEDPY
                     RFKTHIQELDNWLFAEGKQLRPYEKLGAHLVTQNEVGGVHFSVWAPNAQRVSVVGDFN
                     HWNGLVHSMRFHPDSGIWDIFLPNVKKGECYKFEVLDRNGVLRLKSDPYAFASQFRPE
                     TASIVSGLPSIVPAEKTCRNANAPDKPISIYEVHLGSWRRNIENNYWLSYEELADELI
                     PYVKDMGFTHIELLPISEFPFDGSWGYQTTGIYSPTSRFGTPEGLSYFIQKAHDKGIG
                     VILDWVVGHFPVDEHGLVYFDGTHLYEHSDPKEGYHKDWNTLIFSYGRNEVSNYLSGN
                     ALYWIERFGIDALRVDAVASMIYRDYSRSDGEWIPNKYGGRENLEAIDFLRHTNNILR
                     DESQGGASIAEESTSFAGVSHSTERGGLGFNYKWNMGWMNDTLRYMQKDPIYRRYHHN
                     LMTFGMTYQYSEQFVLPLSHDEVVHGKGSLLNKMPGDCWQKFANLRAYYGYMWGYPGK
                     KLLFMGNEFAQGKEWNFAESLDWYLLGEEGGEWHKGVLGWVKALNHLYTQTPALFEQD
                     YNPEGFEWLVVDDHDNSVFAFERKAKNGDSVIVVSNFTPIVRENYRFGVNELAEYQEI
                     LNSDLACYCGSNVSNANRFASELIASHGKAYSLSITLPPLSTIFLKRAADKKTKQNKT
                     "
     gene            12223..14235
                     /gene="glgX"
                     /locus_tag="PXD18_000832"
     CDS             12223..14235
                     /gene="glgX"
                     /locus_tag="PXD18_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HDL6301284.1"
                     /translation="MHYFRGKPFPLGNKLDRQAGEFGTNFAIVSQNATAIELCLFDEN
                     HHETRIPMFSSGDTWHIFVAGVQAGTKYGYRVKGIQDEQAGLLFNPQKLLTDPYAKAI
                     EGKPDLSSAEAAAWYKWNDERDNASLAPKSIVIDEHFDWENDSQLFTPWAETIIYEMQ
                     VKGFSQRNFQIPSDIRGTFAGLAHPVSIDYLKTLGITAVELLPVTYHIDETHLQKQGL
                     VNYWGYNVLGNFAIDPNLAADKQNPLKEFKQLVKTLHQAHIEVIMDIVFNHTAESDKN
                     GPMLSFRGIDNTAYWLDKQGEYENWTGCGNTLNLSNPYILCWAIDCLIYWVEECHIDG
                     FRFDLASILGRTPSFSEKADFFTALKSHSKLTHIKLIAEPWDIGVEGYQLGQFPEPFY
                     QWNDCYRDDIRRFWLQNQGDWGLLARRLAGSDDVFTKYSVSKSINFITAHDGFTLQDL
                     TSYQQKHNWANGEQNRDGHNSNYSNNHGVEGQTADELVKKQREITACSLLATLFLSAG
                     VPMLLAGDEIGHSQQGNNNSYCQDNEITWLDWENMNHTRLDYVRSLIRLRKKIALLSK
                     QNNWWQEDSVQWLNPSAQLMNIDDWHNQHNGLVVLLQEEWLLLFNANRQPQPFLLPQG
                     NWKVVLEQAQGILMTDTQAVTLNNMGVCVLQKSDVMFANKLETQYA"
     gene            14228..15541
                     /gene="glgC"
                     /locus_tag="PXD18_000833"
     CDS             14228..15541
                     /gene="glgC"
                     /locus_tag="PXD18_000833"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HDL6301285.1"
                     /translation="MLNQESTALVARQDLTNDTLVLILAGGRGSRLYELTDKRAKPAV
                     YFGGSRRIIDFALSNCINSNLLKIGVITQYAAHSLLRHLQRGWSFLPYERNQYIDMLP
                     ARQQLDENTWYRGTADAVYQNMAMMKSHYRPKYVVILAGDHIYKMDYTQMLKDHVDQG
                     AKCTVGCIEVPRSQATEFGVMAVNEKLKVKEFVEKPADPPAMPGKPDSSLASMGIYVF
                     NADYLYEMLEKEASTPGTSHDFGKDIIPKAVEQGVLYAHPFERSCKGRNASGAIYWRD
                     VGTIDSYWAAHMDLVSEDPELDLYDESWPIHGRPQQTAPARFFYNRARARTLDNSLIA
                     GGCVITDAEISNSVLFNRVHVEAESVIEHTVILPQVTIGKNCVIKRAVIDRHCVIPDG
                     LEIGVNAEEDAKRFRVSKNGIVLVTQSMLDKLAGKEANSDIKYTI"
     gene            15664..17100
                     /gene="glgA"
                     /locus_tag="PXD18_000834"
     CDS             15664..17100
                     /gene="glgA"
                     /locus_tag="PXD18_000834"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HDL6301286.1"
                     /translation="MKVLHICSEMYPLIKTGGLADVMGALPFAQQQAGNDVRVLIPYY
                     PKVAQTLGETVEVATIGTFAGTVSVRFAYFNGLGVYVIDAPHLFMRDGNPYHDSNYQD
                     YPDNYKRFALLGYIGAQLAQGLDHWWGTAQVLHAHDWQAGLACAYLKSWGSNVKTLFT
                     IHNIAYIGRFNAFHLAELGLPWEFFHAEGLEFYGEISYLKAGLYFADRITTVSPTYAR
                     EITEEIAAAGLHGLLATRQYQGRLRGILNGVDAEVWNPETDTHIVVNYRANYMHGKAK
                     NKAELQRIFGLPEDKEALLMVMVTRLTEQKGADFLLANIDTLMQHKVQIIVLGSGSPD
                     LENALRYFQHKYPNQIGVKIGYDEALSHQIIAGGDLILVPSRFEPCGLTQLYGLKYGT
                     LPLVRRTGGLADTVVDSHKESIENRSATGFVFDYPDAPAFLEAAMRAISLWQKQKLWS
                     SVRQNALAQDFGWAKVAEQYQNLYHEII"
     gene            17195..19695
                     /locus_tag="PXD18_000835"
                     /pseudo
     CDS             17195..19695
                     /locus_tag="PXD18_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651737.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
     gene            complement(19782..20498)
                     /gene="trmJ"
                     /locus_tag="PXD18_000836"
     CDS             complement(19782..20498)
                     /gene="trmJ"
                     /locus_tag="PXD18_000836"
                     /EC_number="2.1.1.200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ"
                     /protein_id="HDL6301287.1"
                     /translation="MQILNQIQIILVETSLPANIGSAARAMKTMGLTHLRLVAPKQPL
                     DEQAEALAAGAKDVLDNAQCYATFDEAIADCQLVIGTSARLRHLQNTLIEPRDCGELV
                     VNRTNLGKVAIVFGRERVGLTNEELLKCQYHLNFPTNPDYGSLNLAMAVQLASYEIRM
                     AYLQNSGEKQPLAADKDYPTAQALEHFFAHTERLYTELGFIRNDSVMLKLRRLYQRAE
                     LETNELNLLRGMLTAVEKAN"
     gene            20678..22216
                     /gene="pntA"
                     /locus_tag="PXD18_000837"
     CDS             20678..22216
                     /gene="pntA"
                     /locus_tag="PXD18_000837"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HDL6301288.1"
                     /translation="MLIGVPRELLDGETRVAATPKTVEQIKKLGFDVLVEQDAGFKAS
                     FEDNTFLNAGANIGTQQEVWNADIIFKVNAPTEAEIELIKEGVTLVSFIWPAQNPQLM
                     EKLQSKKINVLAMDAVPRISRAQALDALSSMANISGYRAVIEAANAFGSFFTGQITAA
                     GKVPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDSRPEVKEQVKSMGADFLEIDFEE
                     EGGSGDGYAKVMSEEFNRRAMALYAEQAKEVDIIITTAAIPGKPAPRLITKEMVDSMK
                     PGSVIVDLAAATGGNCEYTKAGEIVVTDNQVKVIGYTDFPARLPTQSSQLYGTNLVNL
                     LKLLAPNKDGQIEINFDDVVLRGVTVVRDGELTWPAPPIQVSAQLQKQAAAPQAVKKE
                     EKPADPRVKYGVMAAAGVLFLWLASVAPAAFLSHFTVFVLACVVGYYVVWNVSHALHT
                     PLMAVTNAISGIIIVGAVLQIAQPTGNFFIDILAFIAILVASINIFGGFKVTQRMLAM
                     FRKG"
     gene            22231..23676
                     /gene="pntB"
                     /locus_tag="PXD18_000838"
     CDS             22231..23676
                     /gene="pntB"
                     /locus_tag="PXD18_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HDL6301289.1"
                     /translation="MSFGFVTAAYIIAAILFIMSLAGLSKHETAKAGCWYGIVGMAIA
                     LVATIFGPQSHGTIWILIAMAIGGFIGVKKALKVEMTEMPELVAILHSFVGLAAVLVG
                     FNSYGLHTNALMPANLDETAQAAFLAEQATLANIHNVEVFLGIFIGAVTFSGSLVAFG
                     KLSGKLFGRKVSSAALNIPHKHKWNLAAIIVSVFLMIVFLNNPHNIFPVLIMTIIALV
                     FGWHLVSSIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYI
                     MCKAMNRSFISVIAGGFGNEVQSGKGDEEYGEHRETKAEEVAEMLKNASSVIITPGYG
                     MAVAQAQYPVAEITAKLREKGVNVRFGIHPVAGRLPGHMNVLLAEAKVPYDVVLEMDE
                     INDDFEETDVVLVIGANDTVNPAALDDPSSPIAGMPVLEVWKAQNVIVFKRSMAVGYA
                     GVQNPLFFKENTQMLFGDAKERVDDILRALN"
     gene            complement(23743..24669)
                     /locus_tag="PXD18_000839"
     CDS             complement(23743..24669)
                     /locus_tag="PXD18_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6301290.1"
                     /translation="MKPIFLEIRHLRTLIALKESGSVSLAAKRVHLTQSALSHQIKLL
                     EEQYDLTLFERKSSPIRFTPAGERLIKLAYDILPKVIEAELDLARVKQGEVGEVRVAV
                     ECHTCFDWLMPAMDTFRQHWPLVELDIVSGFHTDTVGLLLSHRADLAIVAEEEDSAGI
                     IYKPLFSYEMVAICSKDHPLATKDVWEAEDFKDETLITYPVPDDMLDLLRKILGPAGI
                     KVTRRNSELTIAIIQLVASRRGIAALPYWAVKPYLDRGYVVARKITQQGLYSTLYGAI
                     READATLAYLDDFHDTVKSQSFATLPGLMVLE"
     gene            complement(24779..25894)
                     /gene="asd"
                     /locus_tag="PXD18_000840"
     CDS             complement(24779..25894)
                     /gene="asd"
                     /locus_tag="PXD18_000840"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDL6301291.1"
                     /translation="MQNVGFIGWRGMVGSVLMDRMVEENNFANINPVFFTTSQAGQKA
                     PVFGGKDAGELKNAFDIEELKKLDIIVTCQGGDYTNEVYPKLKETGWNGYWIDAASAL
                     RMKDDAIIVLDPVNQHVISEGLKNGIKTFVGGNCTVSLMLMAIGGLFEKDLVEWVSVA
                     TYQAASGAGAKNMRELLSQMGELEDSVKAELANPASSILDIERKVTAKMRAEDFPTEN
                     FGAALGGSLIPWIDKLLPETGQTKEEWKGYAETNKILGLSDNPIPVDGLCVRIGALRC
                     HSQAFTIKLKKDIPLAEIEQIIAAHNEWVKVIPNDKETTLRELTPAKVTGTLSVPVGR
                     LRKLAMGGEYLAAFTVGDQLLWGAAEPVRRILVQLTQ"
     gene            26269..26574
                     /locus_tag="PXD18_000841"
     CDS             26269..26574
                     /locus_tag="PXD18_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301292.1"
                     /translation="MSKLNKLLSRKTSRKIIPEQVNFDINLPIYIPLFLSDKTAKIQA
                     VWELEQENGERDAGAVKRNRIQFRYLPEGVHKLTLIVGTPLLSKGSKVYQCLIKVNK"
BASE COUNT         7569 a         5236 c         5894 g         7881 t
ORIGIN      
        1 tttttcgaat acatttagca ctatccatcg cctgtttaag taacaagcgg taagattttt
       61 agaatttttt gcaaattcaa ggtaaaatca acccgcttag ttcattacta tttcatataa
      121 gagaaaataa atgcgtttat taattacttt ttttgcccta ttactcggct ttttccaata
      181 tagcttttgg tttggaaaaa atggttggag tgattatcaa gaagtgcaag aagaaattgc
      241 tttattaaaa gtagaaaaca caaagcttac ttcacgcaat aaactaattg aagccgaaat
      301 ttacgattta aagaacggcg tagatgcact tgaagagaga gcaagacttg aacgagaaat
      361 ggtaaaagag aacgagatgt tctaccgaat tgtaccaaaa aacaaataat acataattga
      421 tatattatga agcgaaaaat tattgcagta attccggcgt caggagttgg tagccggatg
      481 caagcagaaa aaccaaaaca atatttacaa ttaaagggta agactatctt agagcataca
      541 gtgtctattt ttcttgaaca ccctcatgtt gaaaaagtga ttgtagcggt ggcaagaaaa
      601 gacccttttt attccacatt ggaactccta aaatccccta agatccaact tgtttttgga
      661 ggagaaacga gagcagattc agtgctaaat gccttacagg aaatcaacac tgaaaatgct
      721 tgggcattag ttcacgatgc ggctcgccct tgcctcaagc ggtcagattt agataaactt
      781 ttgcaaatta acgatccgca aggtggcatt ctcgccattc cagcggtaga tacgatgaaa
      841 agagcaaacg gcacgaaaat cgcacacaca gaagatcgct caaccttatg gcacgcttta
      901 accccacaat tttttcctgc tcaagcatta aaacaagcat tatcctctgc ttttgccaat
      961 aagcttcagg taacagacga agcatctgca atggagcttg caggctacca gccacaattg
     1021 gtttcaggta gaagtgataa tatcaaaatc actcgccctg aagatttagc cttagcggaa
     1081 ttttacctta cacataattt ggagaactaa aatgatacgt attggacacg gttttgatgt
     1141 tcacgctttt ggcgaagata gaccactgat gattgctggg gttgaagtgc cttatcatac
     1201 aggcttcatt gcgcatagtg acggagatgt agcgctgcac gctttaacag atgcgttgct
     1261 tggcgcagca gctttaggtg atattggcaa attattccct gatactgata tgcaatacaa
     1321 aaatgccgat agtcgtggtt tgttgattga agcttaccga caagtgcaag aacagggcta
     1381 tcaagtcggt aacgtcgatg taaccattat tgctcaagct ccgaagatgc gaccgcatat
     1441 tgataaaatg agacaggtga tcgcagacga tctacaatgc gatatatcac aagtgaatgt
     1501 aaaagccact acaacagaaa aattagggtt taccgggcga ggtgaaggca tagcttgtga
     1561 agccgtagca ttgttactaa aaagggcata gcttagagaa gtgaggaagc ggtcttattt
     1621 tcattagcgt tttgtgcgtt tagcgaaaaa tacgcaattt ttttgagaaa tatgaccgct
     1681 tgtattgttt taaattgggc ggaaactacc agcttcctcc agcgcctcca ccgcctgatg
     1741 aaccaccacc gaagctgtcg ccactgcctc tgcttccgcc aaaaccacca ccgaagcctc
     1801 cgccaaatcc acctgagcct cgatcaaagc cacctccgag accaccgcca aagcccccac
     1861 ctctgcgttg gctttctctt agtatttgtc ctagttgatc cattgagctg ggactaatat
     1921 aggtactgtt tcctcgtggg cggaaaatta ggaaaatcac aatgccggca aacaagaaaa
     1981 agagtaagcc gtctatgtca tcaaattctt gcatttcttc gccataactt gcataagggg
     2041 catattcccc gttaatggct gccataatgg cggataagcc atgggcgata ccggctgcat
     2101 attgctcttg tttgaagaat ggcgtgatgt cattgcggat aatgctcgat gcaatcgcat
     2161 caggtaacgc tccttcaagc ccacgtccgg tggcaataaa gagtttgcga tcatttttgg
     2221 caattaataa caatatacca ttgttctcgt tatttttgct ccgtccgatt ccccatttgt
     2281 taaacagggt atgagcatag gttgaaactg cctcgccttc cgtgcttgga ataatcacca
     2341 cggcaatttg cgaacttgtc ttggcacagt tagcaattaa ggcatcttct aatgtccgcc
     2401 attcttgttg gctcaaggtg tttttggtgt agtccgtaat ataataaaac ggattaggcg
     2461 gctctgggta ggtcaccgct gtggcattta ggctaaacag agccaagcac accaataaca
     2521 agcggttgaa aatagataga aatttgcaaa gggatttcat catttgacta ccacctcgtt
     2581 tgaaagctcg tttttatcat cagcctgata agggaaatgg tgagcgagcg gagcttccac
     2641 cattttgatt gcatcacaaa tggcttgggt gtaatcgcct tgttggcagt ccaaacacat
     2701 tgtggcatag attttttgcc aaaaatcgtt atcgactttt tgatgaatgc cttcatcgcc
     2761 aataatcgca gcgtagtgag gcttgaatga aaggtagatc aacacaccgt tatgttcagc
     2821 cgtttcacgc atttttaatt catcgaaaag ctcacttgct cgcaacatag cggcgttgtc
     2881 ggttttgccg attttggctt ttcgttccac caccacacgc aattcggcag aggttttttg
     2941 ctctaaatcg gcaattgctt gttcaatgcg ttgcgtatct atcggtaatt tgttggagag
     3001 aaaagaaaat aatcccattt gttcccctta aaaataaagc aataagcacc ggatttgaaa
     3061 gagcttattg cttttaatat gaataaattg aaactaaaat tagttgaagt ttacggttgg
     3121 tgctttatca gaacctgctt cagatttaaa ttgcggtttt gctttaaagc ccataatcat
     3181 tgccgctaat ttagtcggga attcacgcac ttgcttgttg tactctttca ctttttcgtt
     3241 aaagttattg cgttcaacgt taatgcggtt ttccgtacct tctaattgag cttgtagatt
     3301 taaaaacgct tcgtgggctt ttaattcagg gtatttctca actgaaacca ataagcgtga
     3361 aagagcagag tttacacctt gttgggcttc ttggaattta gccatttgct cttcagttgc
     3421 attgcttggg tcaatggtta ccgcagttgc ttttgcacga gcttcaatca cagaggttaa
     3481 agtttctttc tcaaagttag cctgaccttt tacggtattc actaagtttg gaattaaatc
     3541 cgcacggcgt tggtaagccg attcaacatt tccccatacg gagttgatgt cttcttctgc
     3601 acgcattaaa tcgttgtatt ttgttaaaga ataaccgcca acagcaagca tggcgatcag
     3661 taaaatccaa aaaatctttt tcattatgaa gtcctataat ataaataaaa gagtgaaaaa
     3721 ttgggagcat tgtatcggga aaaatcgaat atagctagct tacttacaaa ttttttcata
     3781 ctatggggcg tagataagat ttgtaaattt ttgttcaaag tcaaccgctt gttgtttgat
     3841 tgttgataag aggaaagcca aatgctcaaa ggaattttag cttcgcttgc agccaatgtg
     3901 ctgtttggag cagtttacta ttttgcgata ttgcttcgcc cgttagaggg agaggcgatg
     3961 ttcggctttc ggatagtggt agtcattccg tttattttgc tggcgattat attgtttaaa
     4021 cagcaatcgg cttttgcgga tcttttgcaa aaaattcgac aaaatccacc gcttgtattg
     4081 gtcattttgc tccttgctct caacaccggc gtgcagcttt ggctgttttt atgggctcct
     4141 aatcacgggc aggcgttgca ggtgtcgttt ggttacttgc ttttaccgat tgtggcggtg
     4201 gctctaggaa aaatggtgtt taaagaacat tttacccgcc tgaaatggct ttctctactt
     4261 ttcgcagtca tcggtgttgg cagtagtttg ttttttaaca gcacgatttc gtgggcgact
     4321 tgggtagctg ggttgggtta tccgctttat attacccttc gccgttattt tcaaatcaac
     4381 acgttagcta ctttttttgt ggagttgtta ctggtattac ccgttgcact ttattatctc
     4441 agccaagtgg aaatgacgcc aatagtggca gaaaatccgc aaatttattt ctacctcgga
     4501 ttgctggggc tggtaagtgg cagtgctttt attctttata tcctctcgag caatttatta
     4561 ccgattaatg tattaggttt actgggctat gttgaaccgt tggtgatgtt gctgatttct
     4621 tttgccatcg gcgaaaaact cgatgccaat tcctatattt tgatggtctg tttgctggtt
     4681 tcgattggat tattgagttg ggatagtttt cgtagcaagg tgtgataatt aaggaaaaat
     4741 aaatcgcttg tagagcaagc ggtttaaaga ttatttgacc ggtttcaata gacctgcttt
     4801 ttttgctcgc tgataggctt gcttaaaagc gattaagcct tcttgcttta aacgaacgga
     4861 aactggacgt tgttgattca ttttagattt ccttttggcg taattaaaat gaaacaatct
     4921 tgattaacgc ccaagggata aaccacttgg aaagattgca taaaatcaca tcgtggcaca
     4981 cacatacgct gatacattcg gttaagtgaa tctctctcgg caatgaagag atagctttct
     5041 ggtgtaaaac gtacataatg ctcaaataat aaacgctcaa gggtttcttg taaagcaatt
     5101 atttctttac gtttgaactg atgattcgct gcgggggcat aaatgtcaat attagaaccg
     5161 ctattttcta gatgctcttt cgccataaat ttgattgtgc aacaggaata ggtgtttata
     5221 tagtttgtga tatctttgcc taatgcggac aaagtcgata taacatcggc atctgagcag
     5281 aaattaatga taaatgcgac attagcaata gtaaattcac tgtattgata agaaattcca
     5341 ctatcaggat cggtaaattc aataaactgc atagtatctc ctcgtagcaa aatcataacg
     5401 agttgatatt attcgtaaag tgatgaaaat gattttttcg atctcgatcg caaaaataat
     5461 attttagact tgatatttcg atgaaataga attcagtaag taccaatatg atataaaaac
     5521 ggagcgtttc gctccgtttt tgtttgtatt tgtgtttgtg ctttattctg ctttttgttt
     5581 gatagcggca tagactacgc cggtgactaa tgagccgatg gcaatagcag ctaagtacat
     5641 taacggttgt gaaacgaatg gaatcacgaa taaaccgccg tgtggggctt gtagggtaat
     5701 gcctagtgcc attgaaattg caccggcggt tgcaccgcct aagattgagc tggcaattac
     5761 acgcacaggg tctgccgcca cgaacggtaa tgccccttct gaaataaagc ataaacctaa
     5821 cacgaatgaa gctttacctg catcacgttg gttggtgttg aatttgctac gagcaatcag
     5881 ggtcgcaatc gccataccaa ttggtggaac catacctgcc gccatcaccg ctgccattgg
     5941 catatattgt tgtgaagcaa ttaaacccac accaaaggta taagccgctt tattcaccgg
     6001 accacccata tcggtacaca tcatcgcacc gagaataata cctaaaataa ttgcattggt
     6061 ttgccccatt gtgtttaacc attccactaa ggcatccatt aatgctttca ccggtgggtt
     6121 gatgacataa atcatcagta agccgacaat cgctgagcct aagagtggta aaatcaaaat
     6181 aggtttaagt gaggttaaac ttgccggtag ctgaatcgca ccatttaaga attttacggt
     6241 ataaccggct aagaaaccgg ctacgatacc acctaaaatc cctgctcctg cggtggtagc
     6301 aagcataccg ccgataagac cgacagctaa ccccggacgg tctgcaattg agaacgctac
     6361 atagcctgcg aataccgcaa tcattaagtg gaatgccgca ccgccaccaa tatccattaa
     6421 ggctttcggc aagccgcctg cgatggtttc atctttaaag gcttcaattc cgaacataaa
     6481 ggaaatagcg atgagcaagc cacctgctac caccagcggt aacatatgtg atacaccggt
     6541 catcaagtgt ttatataacc cttttttctc agaagttgga gcttcagcat tatccgcttt
     6601 tgccacacca ccttcgtaaa ttttcgcttg agcaaaggct ttttcaaatt cttgagtggt
     6661 tttcttcaat gctaaaccgg ttgaggtgcg atacatcggc ttgcctttga atttttccaa
     6721 atcgacatca atatcggcag ctacaaagac taaatctgcc gctgcgactt cttcggcgga
     6781 aattggattt cctgctccta cttgaccacg ggtttcaacc ttgatgttcc aaccctgtgc
     6841 tttggcataa ttttcgattg cttccgcaga cataaaagta tgagccacgc cagttgggca
     6901 agcggtaaca gcaacgatat ttttcacacc agatgaaacc gctgaaaccg cagtggttgc
     6961 ggtagcattt gcaaaagttt gtgcattttc gaccgcttgt ttgagactgg cttcaggttg
     7021 agcaaaggct tgttctaagt ccaaaattgc cccttgcttg ccggcagctt cttgtggaat
     7081 tgcgttatcg aataacacca caaaatcagc ttggtttgcc gccacaacat tgtgtccttg
     7141 ttgcttggca gcggcagata acatttcatt cactaagaaa cggcgtgcgt tgcctagtgt
     7201 ttgaggaaat acaaaagaaa tattcatatt ggtttgttcc tttgattgag gtttaatgat
     7261 tttctgaaat cacggtaatg tcggtttgtt taataatatc gtctaacgcc gcacggtctg
     7321 caatcccaac gttactttga acaacagcta gagcagaagt agctgaggca aaacgcaagg
     7381 tctgctcttt gctccaacct tgagataagc cgtagatcaa gctggcaacc attgaatcac
     7441 cagcacctac agtgctaact acattttcgc aacgtggtgg gcgggcttgt aacacgcctt
     7501 cgtgatttag ccaaagagag ccttgttcgc ccattgatat aattacattt tcaataccac
     7561 gggaacgtaa ttgtttagct gcactaataa tctcttcgat tgagttgagt gaatgcccga
     7621 ccagcacttc cagctctcgg cggtttggtt ttactaacca agggtgagcg gttaagccgg
     7681 cggtgagagc cgcattgctg gtatctaaca ccacttttaa gccttggcgg tgtaaagatt
     7741 ccaaccaaga agcaaatttt tccggcgtta cgccacgagg gagagatcca cacactgcaa
     7801 ctaagtcaaa tttgctttcc cactgatgag ataatgtgac gaatttttcc caatcgcttt
     7861 ccgaaatttc aaagccgaga aagttcagat cagttacatc agcctcggtt tcagtgattt
     7921 tgacattaat gcgggtttta ccgttaatac ggtaaaattc atcagccaaa tcattgtgtt
     7981 taaaggcatt tacgaaatcg ccttgatttt cttcgcctaa aaagccggta accgaaagtt
     8041 ttgtgcctaa gtcagctaaa actttagcaa cgttaatacc tttgccggca gggtataaac
     8101 caagggtttc tacggtgttc acttcgccga tttcaatacg ttgaagtttg ccgactaaat
     8161 caaaggcagg gttgagggta acggttgcaa tacgcataat gattcctcgc ttattcgcct
     8221 aaacctgctt caatcgcagc accgattgcc gcaagtgcta cttcggcatc atcaccgctt
     8281 gccacaaagc gtagcgtcgt gcctttggtt acgccaaggg caacaatttt cattaagctt
     8341 ttggcactta caagcggtga atttttatca acattttgca cttcaatttt ggcgttgaat
     8401 tttttcactt cattcaccaa caccgcactt gggcgagcgt gtaaaccgtg ttcgttttta
     8461 attacaaaag ttgcttcttt cgtattggca tcgacagcag tcgcagtttc ttccgcagga
     8521 attgctgaaa cagcaatgct ttcaatcgta tctgccaccg ccggtacgaa tgaaacactt
     8581 tcgcctaagc cgttaataat tgcttgttgt aatgcctcaa tcgcttgttg ggcgtcttct
     8641 ccctctgcca caaagcgtaa acgatgccct tggcttgccc ctagtgctac tactttcatt
     8701 gcacttttcg cacttgccgg tgcagtgttg cggtctaaat tttcaacgct gatttttgag
     8761 gagaacggtt tcaccgtttg tactaacacc gcagccgggc gggcgtgtaa gccgttgtcg
     8821 ttacgaatgg tgaatgtgcc aaccacttgg ttgccactcg cttcgacatt ggttacaggg
     8881 gttgaagcta cgctttcgcc ttttaataaa ccaagcattt gctccgcaga gaaatgagca
     8941 aactggcttc ttacttctgg ttttaataat tgagttaata gtggctgtag agcattgtcg
     9001 gtttctgcca cagttagtag ggtttgacct tgcgtattac gggcaatagc gataccgtta
     9061 gcttggttgc ctttggcgga atccaccaca aatagattat tgcctaaatg taacgctttg
     9121 ttggcaacca catcgctgat gaatgcttgg gaaacatagc cttgctcttg tagttttgcg
     9181 gcgttaatgg ctgataaagt gatagggctt gaagattcga tattcagaga aatcagctct
     9241 tgagataagg caggaaggtt tttcttaccg cttaatacgg caataaattc atctaaattt
     9301 tgcgttttcg ctaatgtggc agcagcctct tcatcactta atacagtggt gagttgacgg
     9361 agtaaggtta agtgttcgtc cgatttagcc gcaatcccga taactacata agcagtgttg
     9421 ccttcgcccc attccacgcc ttgcggaagt tggataattt gcacgccggt ttctttgact
     9481 aaatcacggg tatcaagcgt gccgtgggga atagcaattc cgttacctaa aaaagtagag
     9541 gtttgggttt cacgattaag cataccgact tcatagccgg ctgctacatt gcccttggcg
     9601 actaattcgg cggcaacaaa acggataact tcttctttgt tgcttgctga accatttaaa
     9661 cggatgtttt ttgccgataa attaagcatt ttagctcctt ggatttaaag ttgattttta
     9721 aactgtaatg ttatggttag tttactctat attttgctaa accgttatag ccaactaaaa
     9781 atatccataa aaatgtttca aaatgtgatc tatgtcacaa aatttaaggt ttgatgattt
     9841 aaactaaaga ttaaaacgat tttattttgt gatttagctc aaaaaatggc gtaaatccac
     9901 ttcttttatt tctatttagt gatagagtga gaactattga aatttaagta ttaaacgctt
     9961 taagcaagga gtgccgatgc aagactatac ttattctgaa aaagatgctt tttttgttga
    10021 gcgactttct tcgggttctt gtaatgatcc tttctcctac ctaggtattc accctagcaa
    10081 taacggcgtt attattaggg tatttcttcc ttctgccata gcttgccaag tgatcgattt
    10141 aaacggaaag cctgtgtcat caatgctaaa aattgatgat agaggctttt ttattgcaga
    10201 gctgattggt aaaaaaacag atttttctta ccgcttgttg gtggaatacc ctgattcaac
    10261 ggtggatata gaagaccctt accgttttaa aacccatatt caagagcttg ataattggtt
    10321 gtttgcggaa ggaaaacaac ttcgcccgta cgaaaaatta ggcgcacatt tagtcacaca
    10381 aaatgaagtt gggggtgtgc attttagcgt ctgggcgccg aacgctcagc gggtttccgt
    10441 ggttggggat ttcaaccact ggaacggctt ggtacattca atgcgattcc accccgattc
    10501 cggtatttgg gatattttcc tgccgaatgt gaaaaaaggg gagtgctata aatttgaagt
    10561 gttggatcga aacggcgtgc tacggttgaa atccgaccct tacgcctttg cctcccaatt
    10621 ccgcccagaa accgcatcta ttgtttccgg cttgccaagc attgtgccag ccgagaaaac
    10681 ctgccgtaat gcgaatgctc ccgataaacc gatttccatt tatgaagtgc atttaggctc
    10741 ttggcgacgc aacattgaaa acaattattg gcttagctat gaagagcttg ccgatgaact
    10801 cattccttat gtgaaagata tgggctttac ccatattgaa ttgctgccta tttccgaatt
    10861 tccgtttgat ggctcttggg gttatcaaac caccggtatt tattcgccaa ccagccgttt
    10921 tggtacgcct gagggcttga gttactttat ccaaaaagct cacgataaag gcattggtgt
    10981 gattcttgac tgggtagtgg ggcattttcc ggtagatgaa cacggcttgg tttattttga
    11041 tggaacgcat ttatacgaac attccgatcc gaaagagggc taccacaaag attggaatac
    11101 cttaattttt agctacggca gaaatgaggt gagcaattat ttgtctggta atgcacttta
    11161 ttggattgag cgttttggga ttgatgcgtt gcgggtggat gcggtggcgt caatgattta
    11221 tcgtgattac tcacgttcag acggcgagtg gattccaaat aaatatggcg gacgtgagaa
    11281 cttagaggca atcgacttct tacgccacac caataatatt ttgagagacg aaagccaagg
    11341 cggtgcgagc attgcagagg agtccacttc ttttgccgga gtgtctcact caactgaaag
    11401 aggcggtttg ggctttaatt ataaatggaa tatgggctgg atgaacgaca ctttacgcta
    11461 tatgcaaaaa gatccaattt accgccgtta tcaccacaat ttaatgactt ttggtatgac
    11521 ctaccaatac agcgaacagt ttgtgttacc gctttcacac gatgaagttg ttcacggcaa
    11581 aggttcattg ctgaataaaa tgccggggga ttgctggcaa aaatttgcga acttacgagc
    11641 ctattatggc tatatgtggg gctatccggg caaaaaattg ctctttatgg gcaacgagtt
    11701 tgctcaaggt aaagagtgga attttgccga gagcttagat tggtatttac tcggggaaga
    11761 agggggcgaa tggcataagg gcgtattggg ttgggtaaaa gcccttaacc atttatacac
    11821 ccaaacccct gcactgtttg agcaagatta caatcctgaa ggttttgagt ggttagtggt
    11881 ggacgatcac gataattcgg tgtttgcttt tgagcgtaaa gccaaaaatg gcgattcggt
    11941 gattgtggtg agtaatttca ccccgattgt gcgtgaaaat taccgttttg gggtgaatga
    12001 attggcagaa tatcaggaaa ttctcaattc tgatttagct tgttattgcg gtagtaatgt
    12061 cagcaatgca aaccgatttg ccagcgagtt aattgcatcg cacggtaaag cctactcctt
    12121 gagcattact ttgccaccgc tatcgactat cttcctcaaa agagccgcag acaaaaaaac
    12181 aaaacaaaac aaaacataac ttaaagaaac ataaaaaata atatgcacta ttttagaggt
    12241 aagccttttc ctttaggcaa taaacttgat agacaagcgg gtgaatttgg cacaaatttt
    12301 gccattgttt cgcaaaatgc aaccgctatt gagttatgtc tttttgatga aaatcaccac
    12361 gaaacccgta ttccgatgtt ttcttccgga gatacttggc acatttttgt agcaggtgta
    12421 caagcaggga caaaatatgg ctacagggtg aaaggcatac aagatgaaca agccggtttg
    12481 ttatttaatc cgcaaaaatt attgactgat ccttacgcta aagcgattga agggaagccg
    12541 gatttaagta gtgcagaggc agccgcttgg tataaatgga acgatgaacg ggataatgcc
    12601 tctcttgcac ctaagtctat cgtgattgat gagcattttg attgggaaaa tgatagccag
    12661 ttattcactc cttgggcaga gactattatt tatgaaatgc aggtgaaagg ttttagtcag
    12721 cggaactttc agattccaag cgacattcga ggcacttttg ccggtttggc tcaccctgtt
    12781 tcgatagact atttaaaaac cttaggaatc accgcagtag aacttctacc cgttacttac
    12841 catattgatg aaacccattt gcagaaacaa gggcttgtga attattgggg ctataatgta
    12901 ttaggtaatt ttgctattga tccgaattta gcagcagata agcaaaatcc tcttaaagag
    12961 tttaaacagc tcgtaaaaac attacatcaa gcacatatcg aagtgattat ggatattgtg
    13021 tttaaccaca cagctgagag tgataaaaac gggccgatgc taagttttag aggcattgac
    13081 aatacagctt attggctaga taaacagggc gaatacgaaa attggactgg ctgtggtaat
    13141 accttaaatt tgagcaatcc ttatatactc tgctgggcaa tcgattgctt aatctattgg
    13201 gtggaggagt gccatattga tggattccgc tttgatcttg cctcaattct aggtagaaca
    13261 ccgagttttt ctgaaaaagc agattttttc acagcactta aaagccattc taaattaaca
    13321 catattaagt tgattgctga gccttgggat attggtgtag aaggttatca attagggcaa
    13381 ttccctgagc ctttttatca gtggaatgat tgttatcgtg atgatatacg ccgtttttgg
    13441 ttacaaaacc aaggtgattg ggggcttttg gcacggcgat tggcaggaag tgatgatgtg
    13501 tttactaaat attccgtttc aaaaagtatc aattttatta cggcacacga tgggtttacg
    13561 ttacaagatc tcaccagcta tcagcaaaaa cataattggg caaatggtga acaaaaccga
    13621 gacgggcata atagtaacta cagcaataac cacggtgttg aagggcagac agcagatgaa
    13681 ttggtaaaaa aacagagaga aatcaccgct tgtagtttgc ttgctacgct ctttttatcg
    13741 gctggtgttc caatgctttt agccggtgat gaaatcggac atagtcaaca aggtaacaat
    13801 aatagttatt gccaagataa tgagatcact tggctagatt gggaaaatat gaatcacaca
    13861 cggctggatt atgttcgtag tttaatccgg ttgcgtaaaa aaatcgcttt gctttccaag
    13921 cagaataatt ggtggcaaga ggattcggta caatggttga atccttctgc tcagctaatg
    13981 aatattgacg attggcataa tcaacataat gggcttgtcg ttttattaca ggaagaatgg
    14041 ctgcttttat tcaatgctaa tcgacaacct caaccgtttt tactgccaca aggcaactgg
    14101 aaagttgtgt tggagcaggc tcaaggtatt ttgatgacag acacgcaagc ggttacgctc
    14161 aataatatgg gtgtatgcgt acttcaaaaa agtgatgtaa tgttcgctaa taaattggag
    14221 acacaatatg cttaaccaag aatcaacggc tcttgttgca agacaagatt taaccaacga
    14281 taccttagta ttaattcttg caggaggacg aggttctcgc ctatacgaat taaccgataa
    14341 acgtgcaaaa ccggcagtct atttcggtgg tagccgccgt attattgatt ttgcgttatc
    14401 aaattgtatt aactcgaatt tattaaaaat cggggtgatt acccaatatg cagcacactc
    14461 tttgttgcgc catttacaac gtggttggtc atttttacct tatgaacgta accaatatat
    14521 tgatatgtta ccggcacgcc aacagctaga tgaaaacact tggtatcgtg gcacagcgga
    14581 tgcggtgtat caaaatatgg cgatgatgaa atcgcactat agaccaaaat atgtggtgat
    14641 tttagcaggg gatcatatct ataaaatgga ctacactcaa atgctgaaag atcacgtcga
    14701 tcaaggtgca aaatgtactg taggttgtat cgaagtgcct cgctcgcaag caacagagtt
    14761 tggggtaatg gcggtgaatg aaaagctgaa agtgaaagag ttcgtcgaaa aaccagctga
    14821 tccacctgca atgccgggaa aaccggattc ctcgctagca tcaatgggga tttatgtatt
    14881 taatgcagat tatctatatg aaatgctgga aaaagaagcc tctacaccgg gaacctcaca
    14941 tgatttcggt aaagatatta ttccaaaagc agtagagcaa ggtgtgctat atgcccaccc
    15001 atttgaacgt tcttgtaaag ggcgtaatgc cagtggggca atttactggc gagatgtcgg
    15061 tacgattgac agctactggg ctgcccatat ggatttagtt tctgaagatc cggaattaga
    15121 tttatatgat gaatcttggc cgattcacgg tcgtccgcaa caaactgcac cggcacgttt
    15181 tttctataat cgtgcgcgtg ccagaaccct agataactca ctgattgcgg gtggttgtgt
    15241 gattaccgat gcggaaatca gtaattcggt cttatttaac cgtgttcacg ttgaagcgga
    15301 gtcggtgatt gaacacacag tgattttacc gcaggtgact atcggtaaaa attgcgtaat
    15361 taagcgcgct gtgattgaca gacattgtgt aattcctgat ggcttagaaa ttggtgtaaa
    15421 tgccgaagaa gatgcgaaac gttttcgtgt cagcaaaaat ggcattgtat tagtgacaca
    15481 gtcaatgtta gataaattag cgggaaaaga agctaattcg gatattaaat atacaattta
    15541 gtaagagatg atataatgct tcgagtttgt catttgaggt cgcaagctcg aagtattgtt
    15601 atgattaaag cgcttcaagc ggtcttattt ttcaactatt ttacacatag aaaacggtta
    15661 aaaatgaaag ttttacatat ttgctctgaa atgtaccctt taattaaaac aggcggttta
    15721 gctgatgtaa tgggggcatt gccatttgcg caacagcaag ctggtaatga tgtcagagtg
    15781 ttaattcctt attacccgaa agtcgcgcaa actttagggg aaacggtaga agttgctact
    15841 atcggcactt ttgccggaac agtctctgtt cgatttgctt attttaatgg cttaggcgtt
    15901 tacgttatcg atgcgcctca tttatttatg cgtgatggta acccttacca cgacagcaat
    15961 tatcaagact atccggataa ctataaacgc tttgctttat taggttacat tggggcgcaa
    16021 ttagcccaag gtttggatca ttggtgggga accgctcaag ttttacacgc acacgattgg
    16081 caagcagggc ttgcttgtgc atatcttaaa agttggggaa gcaatgtaaa aacgctcttc
    16141 actattcata atattgccta tatcgggcgc tttaatgcct tccatttagc agagcttggc
    16201 ttaccttggg aatttttcca cgccgaaggc ttagaatttt acggtgaaat ttcttacctc
    16261 aaagcaggtt tgtattttgc tgatcgcatt actaccgtta gcccgaccta tgctcgtgaa
    16321 attactgagg aaattgccgc tgcaggcttg catggtttac tggcaacccg tcaatatcaa
    16381 ggtagattgc gtggcatttt aaacggggtc gatgctgagg tgtggaatcc ggaaacggat
    16441 acacatattg tggtgaatta tcgtgcgaac tatatgcacg gtaaagccaa aaataaagcg
    16501 gaactccaac gaatttttgg tttgccagaa gacaaagaag cattattgat ggtaatggtg
    16561 actcgtttaa ctgagcagaa gggggcagat ttcttactcg ccaatataga taccttaatg
    16621 caacataagg tacagattat tgtattggga agtggatcgc cagatttaga aaatgcgcta
    16681 cgttatttcc aacacaaata cccgaaccaa attggggtga aaatcggtta tgacgaggct
    16741 ttatcgcacc aaattattgc aggtggtgat ctgattctag taccaagccg ttttgagccg
    16801 tgcggattaa ctcaacttta tgggctgaaa tatggcactt taccgctggt tcgccgtacc
    16861 ggtggcttag ctgatacggt ggtagatagc cataaagaga gcattgaaaa ccgcagtgcc
    16921 accggatttg tatttgatta cccagatgca cctgcgtttt tagaggcagc tatgcgggca
    16981 atcagcttat ggcagaaaca aaaattgtgg tcgagcgttc gccagaatgc ccttgctcaa
    17041 gattttggtt gggcaaaagt ggcagaacag taccaaaatt tataccacga aattatttaa
    17101 tttgtattca caacatcatt tcaagcggtc gaatttgcgg atttttttgt aaaaacgacc
    17161 gcttgcaata ttaaaaatta ggagaattta ctcaatgagc aggcagtcat taagcccaga
    17221 aatgatcaaa aatgttaaaa atgcgatttt gcacaaaatg gtgttcgctt taggggtcga
    17281 accccgtgat gccagtaagc gtaactggct caatgcaacc ttacgtgtag tgcgtgattt
    17341 atctaccgaa gattggttac aaacccgccg tagccaggtt gcaaatggta gccgccgtgt
    17401 ttattacctt tcaatggaat ttttaatggg gcgtacgttc agtaacgcaa tgatttctga
    17461 aggtgtgtat gagcttattg gcgctgcgtt aaaagagtta gggcaagatc tggaagagat
    17521 tatcaatgaa gagggcgtcc gggcttaggt aacggtggct tagggcgttt agccgcctgc
    17581 tatatggaca gccttgccac aatgaaaatt ccggcaatcg gctacggtat tcaatatgaa
    17641 tacggtatgt tccgccaaga aatccgcaac ggggagcaaa ttgagcaacc tgatgaatgg
    17701 ttagagaatg aatttgtgtg gccatatcta cgttcaagta agcgtttccc ggtacgcttt
    17761 ggcggtaaaa cttggcgtga gggcaaaaaa gtagtatggc agccggaaga agaaattacc
    17821 gctcaagctc acgaccaact gatcccgggc tttgagacca cctcaactaa cagcttacgt
    17881 ttatggtctg cacacgcatc gggtagaggg tttggcttat ctgattttaa ccgtggcgat
    17941 tattttgcag caatggttaa acaaaacagc tcggaaaacg tctctcgtgt gctttatccg
    18001 gacgattcta cctataacgg tcgtgaatta cgcttacgcc aagagtattt cctttgctcg
    18061 gcatctgtac aagatattat ccgccgccac gaagcggagt tcggctcttg tgtgaattta
    18121 gccgacaaag tggcaactca cttaaatgac acacacccaa cccttgcggt gcctgagtta
    18181 atgcgtattt taattgacga aaaaggctat ggctgggaac aagcgtgggc gatgactcgt
    18241 aaaattttct tctacaccaa tcacactttg atgagtgaag cgttagaaac ttggccggta
    18301 gaaatgttag cccgtgtgct accacgccat ttagagatta ttttcgacat taacgaatat
    18361 ttcttagagg aagtgcgtag ccaattcccg gaagatcacg atttgatttc tcgtgtttcc
    18421 ttaattgatg aacaaggcga tcgccgtgtg cgtatggcgt ggcttgcggt agtcgcctca
    18481 gcgaaagtaa atggtgtggc gaaaattcac tcggatttaa tggttgaatc tatttttgcc
    18541 gattttgccc gtatttaccc aaatcgtttt actaatgtga ctaatggggt gacacctcgc
    18601 cgctggatca aaattgccaa cccagggctt gctaatattt tagataaatg tatcggcaat
    18661 aagtggctga ctgatttaag tgaattggaa aaattcaacg tgtttgttga tgatgctgat
    18721 gtgcaagcac aggtggcagc ggtgaaagta gaaaacaaac gtcgcttagc caaatatgtc
    18781 gaagaaactc agggaattaa acttaatcct gaagcgattt ttgatgtaca agttaagcgt
    18841 attcacaagt ataaacgcca gcaaatgaac gtgttgcata tcatcacgct ttataaccgc
    18901 atcttgaaaa acccgactgc tgattggaca cctcgtgtgt ttatcttcgc agggaaagcg
    18961 gcaagtgctt attatgcggc gaaaaaagtg attcgtttga ttaatgatgt ggcaaatgtg
    19021 gtgaataatg accctcgcat taatgattta attaaggtgg tgtttattcc gaactacggt
    19081 gtttcattag cacaaatgat tattccggca gctgatgttt cagagcaaat ttccttagcg
    19141 ggtacagagg cctccggaac ctctaatatg aaatttgccc tcaatggtgc tttaaccatt
    19201 ggtacattag acggtgcgaa tgtcgaaatt ttagatcacg ttggtaaaga gaacatcttt
    19261 attttcggta atgaagtaga gcaggtggaa gagcttcgcc acaacggtta ctcaccgtat
    19321 cactactacg aaaaagacag cgaattgaat gaggcaattt cacaaattct aaacggtaaa
    19381 ttctcaccgg aagatccgta tcgctatcaa gatttgatct taaattcagg tgactactac
    19441 caagcctgtg ccgattatcg tagctatgtg gaggctcaag aaaaagtggc tcaagcctat
    19501 cgtaacaaga aagcttggac acgttcagcc atcatcaata ttgccaatat gggctatttc
    19561 tcctcagacc gctcggtgat ggattatgcg aaaaatattt ggcatatcga accgatgagc
    19621 gaagaacaat taaaaggcga ttctacaatg ggcagtatta ttgaaagttc aaataaactg
    19681 ttgaatttaa aataatgatt tagagaaaac ggtaagagta atcttaccgt ttttgtttta
    19741 gtcagggatt ttgcaaattt ctactaaaaa ttaaccgctt gtcaatttgc cttctccacc
    19801 gccgtgagca ttcccctcag taaattcagc tcattagttt ccagttcggc acgttggtat
    19861 aaacggcgga gttttagcat cactgaatca ttgcggataa agcctaattc ggtatataag
    19921 cgttcggtgt gagcaaagaa atgctctaag gcttgagcgg ttgggtaatc cttatctgct
    19981 gcaagcggtt gtttttcgcc agaattttgc aaataagcca ttcggatttc ataacttgcg
    20041 agctgtactg ccattgccaa attcagagaa ccataatcag gattggttgg gaaattcaaa
    20101 tggtactggc atttcaataa ttcttcgttg gttagcccca ctcgctcacg tccaaataca
    20161 atcgccactt tgccaagatt ggttcgattt accactaatt caccacagtc tcttggttca
    20221 atcagggtat tttgcaaatg gcgaagtctg gcactggtgc cgatcaccag ttggcaatcg
    20281 gcaatggctt catcgaaagt ggcgtagcat tgagcgttat ccaacacatc ttttgcccca
    20341 gcagcaaggg cttcggcttg ttcatcaagc ggttgttttg gggcgactaa tcgcaaatgg
    20401 gttaagccca tcgttttcat tgctcgggct gcggaaccga tatttgccgg gagtgaagtt
    20461 tcaacaagaa tgatctgaat ttggttgaga atctgcattg gttttgtttc ttttttgtta
    20521 aatttagcct gttaatagtg tagcaaaaat ttagcctgct taaaatttga aaaaatggga
    20581 aataatcggt ttaattgggc ataatttttt acctatttgt tttatttagt ggtacattta
    20641 gagcgttttt aatcacaaca accatacagg agtctttatg cttattggtg taccaagaga
    20701 gctgttagac ggtgaaactc gagtggcggc aacgccaaaa accgttgagc agatcaaaaa
    20761 acttggcttt gacgtacttg tggaacaaga cgcaggtttt aaagccagtt ttgaagataa
    20821 tacattttta aatgcaggtg caaatatcgg cacacaacaa gaagtttgga atgcagacat
    20881 tatttttaaa gtgaatgcgc cgacagaagc tgaaattgag ttaatcaaag aaggggtaac
    20941 cttagtcagc tttatttggc cggcacaaaa tccacaattg atggaaaaat tgcagtctaa
    21001 gaaaattaat gtgttggcaa tggacgctgt gcctcgtatt tcccgtgccc aagctctcga
    21061 tgctttaagt tcgatggcaa atatttcggg ttaccgtgcg gtgatcgaag cggcaaacgc
    21121 ttttggtagc ttctttactg ggcaaattac cgcagcaggt aaagtaccac cggcaaaagt
    21181 gttggtaatt ggagccggtg ttgctggctt ggctgcaatc ggggcggcaa atagcctggg
    21241 ggcgattgtg cgtgcctttg actctcgtcc tgaagtaaaa gagcaagtta aatcaatggg
    21301 ggctgatttc ctcgaaattg attttgaaga agaaggtggc tcaggtgacg gctatgcgaa
    21361 agtgatgtcg gaagagttta accgtcgtgc aatggcgtta tatgccgagc aagccaaaga
    21421 ggtggatatt attattacca ccgctgccat tccgggcaaa cctgctcctc gtttaatcac
    21481 taaagagatg gttgattcaa tgaaaccggg ttcagtgatt gttgatttag ccgctgcaac
    21541 cggtggtaac tgtgaataca ccaaagccgg cgagattgtg gtgaccgata atcaagtgaa
    21601 agtgattggc tataccgatt ttcctgcacg tttaccaacg caatcttcgc aactttatgg
    21661 tactaacttg gtgaatttac tcaaactgtt agcaccaaat aaagatggtc aaattgagat
    21721 taattttgat gatgtagtgt tgcgtggcgt aacggtggtg cgtgacggcg aattaacttg
    21781 gccggctccg ccgattcaag tatctgccca actgcaaaaa caagcagccg caccacaagc
    21841 ggtcaaaaaa gaggaaaaac ctgcagaccc tcgagtgaaa tatggcgtga tggcagcagc
    21901 aggtgtgctg ttcctatggc ttgcatctgt ggctccggca gcgtttttat cgcattttac
    21961 cgtattcgtt ctcgcttgtg tggtagggta ttatgtggtt tggaacgtca gccacgcact
    22021 acatacccca ttaatggcgg taacaaatgc gatttcaggg attatcatcg taggtgcggt
    22081 attacaaatt gcccaaccga ccggtaattt ctttattgat attttggcat ttattgcgat
    22141 tttggttgcc agcatcaata tttttggtgg ctttaaagta acgcaacgta tgcttgcaat
    22201 gtttagaaaa ggttaaggag aaacgaaact atgtcttttg gatttgtgac tgctgcgtac
    22261 attattgcag ctattctctt tattatgagc ttagccggtc tttctaaaca cgaaaccgcc
    22321 aaagcaggtt gttggtatgg gattgtgggt atggcgattg ctttagtggc aaccattttc
    22381 ggcccgcaat cacatggcac gatttggatc ttaatcgcaa tggcaatcgg tggattcatc
    22441 ggggtgaaaa aagccctaaa agtagaaatg accgaaatgc ctgaattagt ggcaattcta
    22501 cacagctttg tcggtttagc agcggtattg gttggtttta acagctacgg acttcatacc
    22561 aatgcattaa tgcctgcaaa tttagatgaa actgcacaag cggcattttt agcggaacaa
    22621 gccactcttg ccaatatcca caatgtggaa gtgttcttag gtattttcat tggtgcggta
    22681 accttctccg gttcattggt tgcctttggt aaactaagcg gtaaattatt tggtcgtaaa
    22741 gtctcttctg cagcactgaa tattccacat aaacacaaat ggaatttggc agccattatc
    22801 gtttctgttt ttttgatgat cgtgttttta aataatccgc acaatatctt ccctgtgctg
    22861 attatgacaa ttattgcgtt agtcttcggc tggcacttag tttcttctat tggtggggcg
    22921 gatatgccgg tggtagtttc aatgctgaat tcttattcag gttgggcagc cgcagcggca
    22981 ggctttatgc taagcaacga tttattaatc gtaaccggtg cattagtggg atcatcaggt
    23041 gctatccttt cttatattat gtgtaaagca atgaaccgct cattcattag cgtgattgcc
    23101 ggtggttttg gcaatgaagt tcagtctggc aaaggtgatg aagaatacgg tgaacaccgt
    23161 gaaacgaaag ccgaagaagt ggcagaaatg ctgaaaaatg caagctctgt gatcatcacg
    23221 ccgggttatg gtatggcagt ggctcaagca caatatccgg tagcggaaat caccgcaaaa
    23281 ttgcgtgaaa aaggcgtgaa tgtgcgtttt ggtattcacc ctgtggcagg gcgtttaccg
    23341 gggcatatga acgtattatt ggcggaagcg aaagtacctt atgatgtagt gctggagatg
    23401 gacgaaatca atgacgattt tgaagaaacc gatgtggtat tggtaatcgg tgcaaacgat
    23461 accgtaaacc ctgctgcatt agacgaccca tcaagcccta ttgctggaat gccggtgctt
    23521 gaagtatgga aagcacaaaa tgttatcgtg ttcaaacgtt caatggcagt aggctacgcc
    23581 ggtgtgcaaa acccactgtt ctttaaagaa aatacccaaa tgctatttgg tgatgcaaaa
    23641 gaacgtgttg atgatatttt acgggcgtta aattaaattt aaataaaaaa gcgaacataa
    23701 gttcgctttt ttgtgcttag gctaacataa attgttaatt ttttactcta ataccatcaa
    23761 tccgggaaga gtcgcaaaac tctgcgattt tacggtatca tggaaatcat ctaagtaggc
    23821 tagggtagca tcggcttctc gaatagcgcc ataaagggtg ctatatagtc cttgctgagt
    23881 tatttttctt gccaccacat accccctatc taaatatggt ttaaccgccc aataaggtag
    23941 tgcagcaatg cctcgccgac ttgctactag ctgaataata gcaatagtta actcactatt
    24001 acgccgagta actttgatgc cagcagggcc taatattttt cgcagtaaat ctagcatatc
    24061 atcaggtact ggataggtaa ttaatgtctc atctttaaaa tcttcagctt cccatacatc
    24121 ttttgtggca agagggtgat ctttagagca aatagctacc atttcatatg aaaagagagg
    24181 tttgtatata ataccagcac tatcttcctc ttcagcgaca attgccagat ctgcacgatg
    24241 gcttaatagc aaaccaaccg tatcagtatg gaaacccgat acgatatcta attcaactag
    24301 aggccaatgt tgacggaaag tatccattgc cggcattagc caatcaaaac aggtatggca
    24361 ttctactgca acacgtacct ctccgacttc tccttgtttc actcgggcta aatctaattc
    24421 agcctcaatg actttgggca aaatatcgta ggccaactta attaaacgtt cgccagctgg
    24481 tgtaaagcga ataggggagc tttttcgctc aaatagcgta agatcatact gttcttccag
    24541 taattttatt tggtgtgaaa gtgcggattg tgttaaatgg acacgctttg ctgcaagaga
    24601 tacgctaccg ctctctttta atgcgattaa tgtccgcaaa tggcggattt caagaaaaat
    24661 cggtttcata atttattcat ctaaaagtga aaaaagatga aaataattat aacaaacaag
    24721 cggtcaaatt ctgcaaaaaa tttgcaaaat ccaaccgctt gtatagagca gtggcgaatt
    24781 attgggttaa ttgaactaaa atgcggcgaa caggctctgc tgcaccccat aataattggt
    24841 cacctacggt aaatgcagct aagtattctc cacccatcgc taatttacgc aagcgaccaa
    24901 ccggcacgct caatgtaccg gtcactttcg ccggggtcaa ttcacgcaat gtggtttctt
    24961 tgtcgtttgg aattactttc acccattcat tgtgggcagc aataatttgc tcgatttccg
    25021 ctaacggaat atcttttttc agcttaattg tgaatgcttg gctgtggcag cgtaatgctc
    25081 caatacgcac gcataaacca tcaactggaa ttgggttatc gcttaaacct aaaattttat
    25141 tagtttctgc ataacctttc cactcttctt tagtttgccc ggtttccggt aataatttat
    25201 caatccaagg aattaagcta ccgcccaatg ccgcaccgaa gttctcggtt gggaagtctt
    25261 ccgcacgcat tttagccgta actttacgtt caatatctaa aatagaagag gcaggatttg
    25321 ctaattcagc ttttacgcta tcttctaatt cacccatttg agaaagcaat tcacgcatat
    25381 ttttcgcacc ggcaccggaa gcggcttggt aagttgctac agaaacccac tcgactaaat
    25441 ctttctcaaa taaaccaccg atagccatta gcattaggct tacggtacag tttccgccta
    25501 caaatgtttt aatgccgttt tttaagcctt ctgaaatcac atgttggttc accgggtcta
    25561 atacgataat agcatcgtct ttcatacgta atgcagaagc cgcgtcaatc caatagccgt
    25621 tccaaccggt ttcttttaat tttggataga cttcatttgt ataatcacca ccttggcaag
    25681 ttacgataat gtctaatttt tttaattctt caatgtcaaa ggcgtttttt aattcgccgg
    25741 catcttttcc gccaaaaaca ggggcttttt gacccgcttg tgaagtagtg aaaaaaacag
    25801 ggttgatatt ggcgaagtta ttttcttcaa ccatacgatc cattaagacc gaaccgacca
    25861 taccacgcca accgataaaa cctacatttt gcattgtgtt tgctcctaaa aatgatgtta
    25921 taaagattgt gaataaatac aggattttag tgcaaaaatc aatgtttttt attgatttgc
    25981 aaagttttga caaaatttaa ccgctattgt taaaataaaa catcgattat ggtgtatttt
    26041 tggaaataaa tagaatctta taaataggga aatgctcaca atttatgcat tccaattgtg
    26101 gtctaatcaa taaattttgc cgatatatcg ataggaagta gatgtaatta cctaaagttt
    26161 gatctaggtt agttaaatgg gaggttttta actattattt ctaatacttt tattttaagc
    26221 tttacagtaa tgaatgagtt tattttacat tttacaaagg aacattctat gtctaagtta
    26281 aacaaattat tatcgagaaa aacatcgcgt aaaattattc ctgagcaagt taattttgac
    26341 attaacttgc ctatctatat cccgctgttt ttatcagata agacagcgaa aattcaagca
    26401 gtatgggagt tagaacaaga aaatggtgag cgtgatgctg gcgctgtaaa gcgaaatcgt
    26461 attcagttta gatacttgcc agaaggggta cataaattaa cattaattgt tggtacgcct
    26521 ttattatcaa aaggaagtaa ggtttatcaa tgcctaatta aagttaataa ataatattaa
//
LOCUS       DANLXD010000025        24817 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.025, whole genome shotgun sequence.
ACCESSION   DANLXD010000025 DANLXD010000000
VERSION     DANLXD010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 24817)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24817)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24817
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.025"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..782)
                     /gene="znuB"
                     /locus_tag="PXD18_000842"
     CDS             complement(<1..782)
                     /gene="znuB"
                     /locus_tag="PXD18_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter permease subunit ZnuB"
                     /protein_id="HDL6301293.1"
                     /translation="MFDILFPAWLAGVLLAFITAPLGAFVVWRKMAYFGDTLSHSALL
                     GVALGIFLELDPYLAVIGMTILLALLLVWLEQKTNYSVDTVLGIIAHTSLSLGVITIS
                     LLDNVRVDLMSYLFGDLLAINFSDVVFIGIGATLICLILMLFWKRLLSITISPELAQI
                     EGLNVARLRLLLMILTALTIALSMKFVGALIITSLLIIPSATARRFAKTPEKMVLIAI
                     FFSIIAVSGGLLLSSWKDTPAGPSVVICAGLIFLLSLFKKEY"
     gene            complement(869..2206)
                     /locus_tag="PXD18_000843"
     CDS             complement(869..2206)
                     /locus_tag="PXD18_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000067755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HDL6301294.1"
                     /translation="MSSLSFDFSEDFRPLAAKMRPRNLAEYVGQSHLIGEGKPLRRAI
                     EAGHSHSMIFWGPPGTGKTTLAEIIAHHLDAEVERISAVTSGVKEIREVIEQAKLNRQ
                     AGRRTLLFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRARIYI
                     LKPLQAVEILKILQMAIADTERGLGNETLVLEDDVLALLADYVNGDARFALNCLELMV
                     DMAQDSAKGKVLNKSLLTEVLGERQARFDKGGDRYYDLISALHKSIRGSSADGALYWY
                     ARILTAGGDPLYVARRLLAIASEDIGNADPRAMQIAIVAWDCFTRVGAYEGERAIAQA
                     IIYLAVAPKSNAVYQAFNEAKRLAKEAKDYDVPAHLRNAPTQLMKSLGYGEEYRYAHN
                     EPNAYAAGENYFPPELKDTEFYFPSERGMEKQIKEKMAWLKAQDQASPIQRYK"
     gene            complement(2216..2704)
                     /gene="mreD"
                     /locus_tag="PXD18_000844"
     CDS             complement(2216..2704)
                     /gene="mreD"
                     /locus_tag="PXD18_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HDL6301295.1"
                     /translation="MRTNPIFQILVIIAIFVVAFVLEIMPWPVGFQGLRPTWVVLVLI
                     YWALALPDKMSVGTAFIAGIVWDLILGSILGIHALVLSVAIYFVAKYHLILRNLSLWL
                     QSLLVMAYIVLIRFFIFVIEYILHSAEFNSQELLGAVISGVLWSWIFLLMRHIRRQLR
                     LR"
     gene            complement(2704..3759)
                     /gene="mreC"
                     /locus_tag="PXD18_000845"
     CDS             complement(2704..3759)
                     /gene="mreC"
                     /locus_tag="PXD18_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HDL6301296.1"
                     /translation="MKPIFAKAPSLGMRLIIAVIFSIMLIISDGRSSLMIQARNLLET
                     AVSGLYYFANTPRSILDGVSGNFIDNNKLQLENNLLKEQLREKSADLLLLDQLKVENQ
                     RLRLLLSSPLRQDEYKKIAEVLAAEMDAYRQQVVINQGRLDGAFVGQPIIDERGVVGQ
                     VISVGEKSSRVLLLSDITHAIPVQVLRNDVRGIASGTGVNNELVIDNLPRSIDVVKGD
                     VLVTSGLGGRFPEGYPVAIVETVENDTKSQFARIVARPLASFDRLRYLLLLWPTAEEK
                     NYSQSLSPAQVREVVEERRNSVNPFERLKQMSNKKTEVQLEAKEEQIENDEINENPAA
                     QPEAENEQNYHTEEGAE"
     gene            complement(3861..4913)
                     /locus_tag="PXD18_000846"
     CDS             complement(3861..4913)
                     /locus_tag="PXD18_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HDL6301297.1"
                     /translation="MFKKFLGLFSNDLSIDLGTANTLVYVKGQGIVLDEPSVVAVRQD
                     RMGSLKSIAAVGSHAKLMLGRTPKSIMAIRPMKDGVIADFFVTEKMLQHFIKQVHSNN
                     FMRPSPRVLVCVPAGATQVERRAIKESAIGAGAREVYLIEEPMAAAIGAGLPVHEAMG
                     SMVIDIGGGTTEVAVLSLNGIVYSTSVRIGGDKLDEAIIAYVRRHFGSAIGEATAERI
                     KQEIASAKIESDDDVKTMEVHGHNLAEGAPRTFELNSRHVLEAIEQPLNGIVEAVKSV
                     LEQCPPELAADIFERGMVLTGGGALLHNLDRLLSDSTGVQVVVAEDPLTCVARGGGKA
                     LEMIDMHGGDVFSIDD"
     gene            complement(5028..5657)
                     /locus_tag="PXD18_000847"
     CDS             complement(5028..5657)
                     /locus_tag="PXD18_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HDL6301298.1"
                     /translation="MDIFIQGFIVCFGLIVSIGAQNAFLLKQGILKQHIFWIALLCFL
                     GDVFLMTIGVLGLGTLIAELPVVSFIISLLGAIFLLSYGSRSFISVFKSGEYLVASGE
                     NATSLKKALLITFAITFLNPHVYIDTVVIVGSIGGKLDFNGKIYFLAGALLCSFIWFF
                     GIGYGASLLSPYFAKRRTWQILDAVTGLIMYFIAFSLLIYTYQLALQIF"
     gene            5761..6408
                     /gene="udk"
                     /locus_tag="PXD18_000848"
     CDS             5761..6408
                     /gene="udk"
                     /locus_tag="PXD18_000848"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HDL6301299.1"
                     /translation="MTDTSQTSSCVVIAIAGASASGKSLIASTIYKELKNELGTDNIG
                     IISEDAYYRDQSHLTMEERIKTNYDHPNSMDHHLLVEHLRQLKQGNAIEIPEYDYTEH
                     NRKTTTKHFEPKKIIILEGILLLTDENIRNEINVSIFVDAPLDICFIRRLQRDMVERG
                     RSMESVISQYRKTVRPMFLQFIEPSKQYADIIVPKGGKNRIAIDILKAQIKQLLK"
     gene            6423..7004
                     /gene="dcd"
                     /locus_tag="PXD18_000849"
     CDS             6423..7004
                     /gene="dcd"
                     /locus_tag="PXD18_000849"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HDL6301300.1"
                     /translation="MRLCDTDIKRYLDEGIIAITPRPSDDKISGATADVRLGNSFRVF
                     REHKTPYIDLSGPREEVAAQLNKVMSDEIIIGDDEAFFLHPGDLALATTLESVSLPAN
                     IVGWLDGRSSLARLGLMVHVTAHRIDPGWEGKIVLEFFNAGKLPLALRPNMAIGALSF
                     EILSGDAAKPYNARKDAKYKNQQSAISSRINQD"
     gene            7082..7237
                     /locus_tag="PXD18_000850"
     CDS             7082..7237
                     /locus_tag="PXD18_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009041538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HDL6301301.1"
                     /translation="MLHYAVVFFVIAIIAALLGFGGIAGSATEIAKILFFVFLILTVI
                     SFFFKKK"
     gene            complement(7366..7968)
                     /locus_tag="PXD18_000851"
     CDS             complement(7366..7968)
                     /locus_tag="PXD18_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDL6301302.1"
                     /translation="METLIEFFSSYGYWAVFLVLLACGFGVPIPEDITLVSGGVISGL
                     GYTNVHWMLVVSMLGVLVGDSTMYWLGRIYGEKILKFPLIRNVATPERFATVQERFEK
                     QGWKLLFMARFLPGLRAVVYLVSGITRKVSFVKFLLVDFCAAIISVPIWVYLGDYGAS
                     NLDWLKEQVANGQHLIFAILGIVILFLGWKWYKNKKQYKK"
     gene            complement(7970..8989)
                     /gene="purR"
                     /locus_tag="PXD18_000852"
     CDS             complement(7970..8989)
                     /gene="purR"
                     /locus_tag="PXD18_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor PurR"
                     /protein_id="HDL6301303.1"
                     /translation="MATIKDVAKYAGVSTTTVSHVINKTRFVAEDTTKAVWEAIKALN
                     YSPSAVARSLKINTTKSIGMIITTSESPFFAEIVLAVEEFCYSKGYSLFLCNTQNKLE
                     KIQNHLDMLIKKRVDGILVMCSEYTANSFDIFENSNIPMVIMDWGRSDERSDIILDHG
                     VEGGYIATQHLIENGHQDIAVITGNRDKEIARTRFEGFKKALSEAGLSIREEWIQEGD
                     FEPEGGYECMNNLLKSSEKLPTAVFCFNDSMALGAISAITEKGLNVPQDISVIGYDNV
                     HSSRFYAPPLTTIHQSKSRLGSAALELLLERIEDNENAKEPKVLEFFPELVKRKSVRN
                     LNIKE"
     gene            complement(9125..9853)
                     /gene="cmoA"
                     /locus_tag="PXD18_000853"
     CDS             complement(9125..9853)
                     /gene="cmoA"
                     /locus_tag="PXD18_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HDL6301304.1"
                     /translation="MQRDTLFSAPIEKLGDFTFDESVAEVFPDMIQRSVPGYSNIITA
                     IGMLAERFVTDNSNVYDLGCSRGAGILSIRRNVNAKNVQIIGVDNSQPMVERCKTHLS
                     AYHSEIPVTILLDDIRHIEIKNASMVVLNFTLQFLPREDRLALLQKIYQGLNSNGILV
                     LSEKFTFESEEMNELLIDLHHTFKRANGYSELEVSQKRNALENVMRTDSIETHKKRLQ
                     EAGFTQVELWFQCFNFGSMIAIKA"
     gene            complement(9863..10645)
                     /locus_tag="PXD18_000854"
     CDS             complement(9863..10645)
                     /locus_tag="PXD18_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDL6301305.1"
                     /translation="MTEKSQLNFNYQPSNNHANAQTMIFLHGLFGDLNNLGAIAKPFA
                     ERYSILMVDLRNHGRSFHSDEMNYALIAQDLAQLLTELNIQNAIVVGHSMGGKSAMAL
                     AAFAPELVEKLVVIDIAPVTYTQNRHQQVMAALFAVKEAKPQNRQQAKAIMAEYIRDE
                     GVQQFMLKSFDAQSEQSFRFNLQALKDNYQNVMGWQQVFVDKPTLFIKGALSDYIQAE
                     HTQTILAQFPQAKSFIVANADHWVHAEKTGTVVRAINKFLEK"
     gene            10764..11330
                     /gene="seqA"
                     /locus_tag="PXD18_000855"
     CDS             10764..11330
                     /gene="seqA"
                     /locus_tag="PXD18_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation negative regulator SeqA"
                     /protein_id="HDL6301306.1"
                     /translation="MKRIEIDDELYQYIASRTQSIGETASDILRRLLRLPQSPQPFVL
                     VQEHMINELKELVKTPSRATKKNESNAEKTVEKLENILNSEHFMNENKNVVRFTMLLA
                     ALYRANPEAFAKATEKVRGNERIYFSQSEAEILATGSGVKAKQIPDSPFWVITNNNTA
                     RKGLILKGVMESMKVPSQLIERIQALFI"
     gene            11340..12758
                     /gene="menE"
                     /locus_tag="PXD18_000856"
     CDS             11340..12758
                     /gene="menE"
                     /locus_tag="PXD18_000856"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HDL6301307.1"
                     /translation="MLINSTRFPTQFWAAHSAQNVAIIWEKGTSDYLNHLPSNITWYS
                     LNQLIAQAIFVLQQQGATPHSLIAYCGSHRLIGLLTYCASLALGAKILMLNPAQTASQ
                     RQAVLDDNGVELIINDADFAKFSAKTTACNAFPTIDFEKPATLTLTSGSSGKPKAVVH
                     SIAAHLYSAEGVCELMAFEQPNSWLLSLPLFHVSGQGIIWRWLFKGATLYVHEDKSDF
                     FLSAQKVSHLSLVPTQLQRYLNQLDSMVSQKCLLGGSMLPAELIAQAQQSGMTTFSGY
                     GMTEMASTICAVENDLNSVGFPLKHRELKLENGEIWVKGKSLGLGYWQKNGQIRPLVN
                     TQGWFATKDRGEWNHKKQLVIKGRLDNMFISGGENIQPEEIEQLIFRSQLVEQIIVLP
                     IEDKQFGHRPVAFLQFKQSDSKNELHKLKIWLSDKLERFKQPVAYYLLDIEKYQKQGL
                     IKLSRTQLQQDLKLKVLKEIYV"
     gene            12751..16128
                     /gene="mscK"
                     /locus_tag="PXD18_000857"
     CDS             12751..16128
                     /gene="mscK"
                     /locus_tag="PXD18_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel MscK"
                     /protein_id="HDL6301308.1"
                     /translation="MFRPILKTFVLSLGLMLNSYALAELPTQQVVQTQLDSAKKLDQA
                     DADNKALVQTLEDTLAFLAQIDKQKADNQALNKSIQDSQKALKTSQHNLEKLKEVTIA
                     SVDNLTQKATTDLQKELTSTQSQLETVQHDLSIINNNLVAQNTAPDKAQTALTEMVKR
                     KQEISSQLSATNIKNELQTKLEVELELIELKNTYNQILLGGSEDLSALYSAQLDEKKQ
                     EQQNLQAEIANLQTAINNKIVEESQNKLDQAQAVQNQQNNATTNPVILRELDINTKVT
                     QELLKQTKDMTQLSQDNLRIKSVLDNLQQTQRNIEEQISSLQGTLVLSRIINKQKQSL
                     PQDEMISGLSKQIADLRVRVFDITEFKDSFADINAYISRIEQDEKTTFTSKEKEQLSK
                     ILQERSDTLTEMIKSLNNQLNLLINIELNQQQVQTISDALQQKLQQQSFWVKSNNPID
                     LEWFSKFVDITHYQFIDIGKKLNFSNWRDNLLPASILVGILLLLAIFINRQKDKIKQK
                     LHQINNRLKIVATDSQWNTPLAIFWTLVLCLPSTLMFLAGFVAITYISFENPQEVWTW
                     GLKMAIYWLYFAFLVAMLRPHGIGHIHFNMPQKSNEIFRNILKRSVWIIALLLNTSIF
                     TNLEMGISYDMLGQTMTIFVLILMIWMIVPAFRQAISTYENVTTEEKKESKSILLTIV
                     KLVLLLAPIILIILIALGYYYTALVIIEHLVDSYFAIITWIIIRNILYRAFSISSRRL
                     AYRRLQEKREAAEAKTRAKAEQNDENPDGVELPFELKEDSIAVSEVKNQMLKLTDFVL
                     WIGLFVLLYWVWSDLITVALYLDGVTLWQQSVTTEAGIVMESITLLNLLTAILIIVVM
                     VVLIRNLSGLLEALIFSHFKLSQGTPYTITTLLTYLIIALGAIFAFGTLGMSWSKLQW
                     LLTALSVGLGFGMQEIFANFVSGIIILFERPMRIGDTITIGTYSGTVSKIRIRATTLV
                     DFDGKEVIVPNKAFVTERLVNWALSSTATRIIVQVGVAYGSDLELVKRLLLQVAEENP
                     KVLKDPQPRAYFLTFGASTLDHELRAYVNDLSDRNPTIDALNTRIHQLFNEHNIDIAF
                     NQLDVYIKNNDTQDEIKVDSKRFEFERPNNITAKEKE"
     gene            16131..17213
                     /gene="aroC"
                     /locus_tag="PXD18_000858"
     CDS             16131..17213
                     /gene="aroC"
                     /locus_tag="PXD18_000858"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HDL6301309.1"
                     /translation="MAGNSIGQLFKVTTFGESHGIALGCIVDGVPPNMALSEADLQPD
                     LDRRKPGTSRYTTPRREDDEVQILSGVFEGKTTGTSIGLIIKNGDQRSQDYGDIAEKF
                     RPGHADYTYQQKYGIRDYRGGGRSSARETAMRVAAGAIAKKYLREQFGIEVRGYLSQI
                     GNIKIDPKTVENIEQIDWHAVNSNPFFCPDPVAIEGFDALIRELKKEGDSVGAKLTVI
                     AERVPVGLGEPVFDRLDADLAHALMSINAVKAVEIGDGFAVVEQRGSQHRDEMTPQGF
                     LSNHAGGILGGISSGQPIIAHIALKPTSSITIPGRSVNKNNEAVEVITKGRHDPCVGI
                     RAVPIAEAMMAIVLLDHLLRFKAQCR"
     gene            17232..18059
                     /gene="mepA"
                     /locus_tag="PXD18_000859"
     CDS             17232..18059
                     /gene="mepA"
                     /locus_tag="PXD18_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HDL6301310.1"
                     /translation="MKLLKTLLVSSLAFTATALNATQWEKIKTPVQGKAQSIGGYSNG
                     CIIGAQPLALKGEGYQVIRSARNRYYGHPQLLDYLTHLGKKTKAAGVPTILIGDMGMP
                     AGGRFASGHASHQTGLDADIWFKFGPMDDETARNPAGLATIMVNRSTERVDDSLWNQH
                     HTNLVKLAATDPRVDRIFVNPAIKVKLCQTAGNDRAWLRKIRPWYGHDSHFHVRLTCP
                     ADAASCENQALVPAGDGCGEELYSWFEPKEASGTPKAKVLPTAPVQCQMILSEQGLN"
     gene            18132..20051
                     /locus_tag="PXD18_000860"
     CDS             18132..20051
                     /locus_tag="PXD18_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HDL6301311.1"
                     /translation="MRLFVAEKPSLARAIADVLPKPHTKGDGFIQCGEHDTVTWCIGH
                     LLEQAEPDVYDERFKMWRMEHLPIVPEQWKLIPKKETLKQFKVVEKLIKKADVLVNAG
                     DPDREGQLLVDEVFGYLNLSAERKSQIQRCLVSDLNPNAVSRAIEKLQKNSDFIPLAT
                     SALARARADWLYGINMTRAYTLQGRWAGYKGVLSVGRVQTPVLGLIVRRDLEIEHFVP
                     KDYFEVLAQIVVPETQERFKAQWQPSKACEDYQDEDGRVLSRPLAENVVKRITDQPAT
                     VTEYQNKIEKETAPLPYSLSVLQMEAAGRYGLSAQAVLDICQKLYETHKLITYPRSDN
                     RYLPTEHFNDRFKVMAAIAHHLPEYQQKPEVIDATIRNRCWNDKEVEAHHAIIPTARQ
                     GTVHLTENEKRVYQLIARQYLMQFCPDAEYRKSKIGLEIAGGSFVAQARNLVIAGWRA
                     LLGKEDSLDDAEPLLPIVKKGQILHCEKGEIVSKKTQPPRHFTDRSLLSAMTGIARFV
                     QDKELKKILRETDGLGTEATRAGIIELLFKRGFLIRKGKNIHSTEAGRILIQALPDSA
                     TQPDMTAHWEMQLNQISKKETSYQQFMFDLNQQLPHLLQSPNRQVLQNLAKITPLASG
                     NKPRYFKKRTQTAEN"
     gene            20157..20483
                     /gene="secG"
                     /locus_tag="PXD18_000861"
     CDS             20157..20483
                     /gene="secG"
                     /locus_tag="PXD18_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HDL6301312.1"
                     /translation="MLINVLTIVYLVVAVLLIAFVLMQQGKGADAGASFGAGASATVF
                     GSAGSANFLSRTTALLATIFFAISLVIGNLSSHNVAPKSQFEDLSQVEQKQVEPVKIE
                     NSDIPQ"
     gene            20508..20593
                     /locus_tag="PXD18_000862"
     tRNA            20508..20593
                     /locus_tag="PXD18_000862"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20542..20544,aa:Leu,seq:gag)
     gene            20796..22037
                     /locus_tag="PXD18_000863"
     CDS             20796..22037
                     /locus_tag="PXD18_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6301313.1"
                     /translation="MARTTKALNKTQIENAKSKDKEYILSDGDGLNLRVKPLPKGSKI
                     WIFNYTNPQTKNRTNLTIGRYPLITLAEARTICDGYRSLIEKGIDPQEEKKRLQQEAE
                     NRVNDTFRNVAESYFNGIYKEKAKNPITREKNWIRLENHIFPYIGDKHVEEIKVKALV
                     DIYSKVADKSNTLKKLHQLVSAVMDHAITQGIIESHNCRLAVKNFYIKPSTPNPTIEL
                     EELPQLFTDLHNAKLSKQTYALVCWSFLTALRPNEAVNAEWKEIDFEKKLWNIPKEKM
                     KGKADKKRPHSVPLSSQALKILEMMKMHSNSSPFVFPGRSSNSKPMSNATVNSTLKRN
                     GYKDRLTAHGIRAFVKTFLSSRKVDRHVSESILSHLLEGGDDLENTYNRYDFLEERVP
                     VMQLLGDYCEQCGMNLELVRG"
     gene            complement(22196..24064)
                     /locus_tag="PXD18_000864"
     CDS             complement(22196..24064)
                     /locus_tag="PXD18_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HDL6301314.1"
                     /translation="MFKKLLELRQQKAAIEAEMRSILTKADEEKRSTTEAEGAKFDEL
                     RSQAENLVKEIARYEAITDEQRNQPGQQVETANVKVSDDELRHWIKTGELRSLATNTN
                     GGADGGYSVIPELDKQVMKRLTDDSVMRQIANVVKLTQGKEYKKLVSAGGAAVNHIGE
                     GEARTETATPKMNEVTIAVHNIYAYPKTTQEILDFGGVDILGWLTEEISESFVETEET
                     DLTNGTGTKQAKGFLAYPRTTANDKTRPFGTLQKMEVQPATVIGWNSKGQPETLTPYP
                     PYSVNVQRTVNRQNWLTAYIPHSYDENVAETPHFDQWLNFVSDGKQDKAKNILAALYA
                     ILTNRYNWQVFFQVTGKGGSGKSVFAGIATLLAGEKNTASARLENFDDERKIAGLEDK
                     KLIICSEQTKYAGDGGGLKAITGGDMVRVDPKNKHPFNARIAAMIMIVNNDPCKWTER
                     NGGIDRRIVNFRFNKRPPENERDPYFMDKITLEIGGIIRKVLDTFPDPLEAKRALEEQ
                     KESLEALEIKKQSDPLTDFFEYLYTTENTDGLYIGTGNTLGHDKIRTHLYPAYLAFVK
                     AKNVLELGLNTFVVGIEQAVKQHGNKHDFTKRKTNKGQRTNVHFKNFDDFQSDILN"
     gene            complement(24075..24470)
                     /locus_tag="PXD18_000865"
     CDS             complement(24075..24470)
                     /locus_tag="PXD18_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6301315.1"
                     /translation="MISNEAIRQEVIDLLQGNIQGIQHFHNGRAVFTDVENELPAIAV
                     FIDEAEYSQLTLCDGECNAYLKIGIYLPMFSTENDLDLVAQKISDVMNQATFHSMDEC
                     VLAKYSYDYDANESAWKTATLHYNINYLN"
BASE COUNT         7780 a         5232 c         4668 g         7137 t
ORIGIN      
        1 tggtattctt ttttgaatag cgataataga aaaatcaagc cggcacaaat gactaccgaa
       61 ggccctgctg gtgtatcttt ccaactggat aacaataaac cgccactgac tgcaataata
      121 ctgaagaaaa tcgcaatcaa caccattttt tcaggcgttt tagcaaagcg tcttgccgta
      181 gcagacggaa taatcagcag tgaggtaata attaaagcac cgacaaattt catacttaat
      241 gcgatagtta atgcggttaa aatcatcagc aataaacgta agcgagccac atttaatcct
      301 tcaatttgag caagttccgg gctgatggta atcgacaaca accgcttcca aaacagcatt
      361 aaaatcaaac aaattagggt tgctccgatt ccgataaaca ccacatcaga aaaattaatt
      421 gccagtaaat cgccgaataa gtaagacatc aaatccactc gtacattatc caacaaacta
      481 atggtaatta ccccgagaga aaggctagta tgggcgataa tccccaacac ggtatccacc
      541 gaataattgg ttttttgctc caaccaaacc agcaataatg caagaagaat agtcattcca
      601 attacagcaa gatacggatc gagttctaaa aaaatcccta atgccacgcc gagcaatgca
      661 gagtgcgaaa gtgtgtcgcc gaaatacgcc atttttcgcc acaccacaaa agcccctaga
      721 ggtgcggtaa taaaggctaa caaaacaccg gcaagccaag ccggaaataa aatatcaaac
      781 atattggttc tcaaaggcaa gtaaaacaag cggttatttt ttcggaaaaa tttgcaaatt
      841 ttttgctgat ttagaccgct tgtcatattt atttataacg ttgaatcggg ctggcttgat
      901 cctgtgcttt cagccacgcc attttttctt taatctgttt ttccattccc cgctcacttg
      961 ggaagtagaa ttcggtatct ttcagctcag gcgggaaata attctccccg gcggcataag
     1021 cgtttggctc attgtgggca tagcgatact cttcgccata gcctaaagat ttcattaatt
     1081 gagtgggagc attacgcaaa tgcgccggca catcgtagtc ttttgcctct ttagcgaggc
     1141 gctttgcttc attaaaagct tgatagaccg cattgctctt tggggcaact gccaaataaa
     1201 tgatcgcttg ggcaatcgct ctttcacctt cataagcccc cactcgggta aagcaatccc
     1261 aagccacaat cgcaatttgc attgctcgag ggtcggcatt accaatatct tcagaagcaa
     1321 tcgcaagcag ccttcttgcc acataaagcg gatcaccacc ggcggttaaa attcgggcat
     1381 accagtataa tgctccatca gccgatgagc ctcgaatgga tttatgtaac gcagaaatga
     1441 gatcatagta acgatcaccg cctttatcaa aacgagcttg tcgttcgcct aacacttcgg
     1501 tcagcaaact tttattcagc actttccctt tagctgaatc ttgtgccata tctaccatta
     1561 attccaaaca gttcaaggca aaacgggcat caccattaac ataatcagca agcaatgcca
     1621 gtacatcatc ttcaagtacc aaagtttcat tgcctaaacc acgttcggta tcggctatcg
     1681 ccatttgcaa aatttttaga atttcgaccg cttgtaacgg ctttaaaata taaattctgg
     1741 ctcgggaaag cagtgcgtta tttagctcaa aagagggatt ttcggtagtc gcaccaataa
     1801 aaataatagt gccgtcctca atatgcggta aaaacgcatc ttgctggctt ttgttaaagc
     1861 ggtgaacttc atccacaaaa agcaacgttc gtctgccggc ttggcggttt aatttggctt
     1921 gttcaatcac ctctcggatc tcttttacac cgctggtcac agcggaaata cgttcaactt
     1981 ccgcatcaag atgatgggcg ataatttcag ctagggtcgt ttttccggtg ccgggcggtc
     2041 cccaaaaaat catagaatga ctatgtccgg cttcaatcgc tctgcgtaac ggtttgcctt
     2101 cgccaattaa atgagattgc ccgacatatt cagccaagtt tcgaggtcgc attttggctg
     2161 caagcggtcg aaaatcttca ctaaaatcaa aagacaaact actcatttta acctcttaac
     2221 gtaaccgcag ttggcgacga atatgacgca ttaataagaa aatccaagac caaagcacac
     2281 cactgattac agcacctaac aattcctgtg aattaaattc ggcactgtgt aaaatgtatt
     2341 caatcacgaa aataaagaaa cggatcagca caatatatgc cattactaat aggctttgta
     2401 gccatagcga taagtttcgc agaatcagat ggtatttcgc aacaaaataa atcgccaccg
     2461 ataacactaa ggcgtggatg cctaaaatcg agccaagaat cagatcccag acgatgccgg
     2521 caataaaagc cgtccccaca ctcattttat caggtaatgc caatgcccaa taaattaaca
     2581 ccaaaacgac ccaagtaggg cgtagccctt ggaatcctac cggccaaggc ataatctcaa
     2641 gtacaaaagc aaccacaaaa atcgcaatta tcacaaggat ctgaaaaatc gggtttgttc
     2701 tcattattcc gctccttctt ccgtatgata gttttgttca ttttccgctt ctggttgtgc
     2761 tgccggattc tcatttatct catcattctc tatttgttct tcttttgcct ctagctgcac
     2821 ttcagttttc ttgttagaca tctgttttaa acgttcaaat ggattcacgc tattacgtct
     2881 ttcttcaaca acttcacgta cttgcgctgg cgacaagctt tgggagtagt ttttctcttc
     2941 cgccgtcggc caaagcagta ataagtaacg taagcgatca aatgaggcta acggacgagc
     3001 aacaattctg gcaaattgac ttttggtatc attttcaacc gtttctacaa tcgccaccgg
     3061 atatccctca gggaaacgtc cacctaagcc tgaagtcacc agcacatcac cttttaccac
     3121 atcaatagaa cgaggcaagt tatcaatgac caattcatta ttcacccctg taccactggc
     3181 aatgccacgt acatcattgc gtagcacttg aacaggaata gcatgagtaa tatcagagag
     3241 caataaaaca cggctagatt tttcccctac agaaataact tgtccaacaa cacctctttc
     3301 atcaataata ggttgcccga caaaagcacc gtctaaacgc ccttgattaa tcactacttg
     3361 ctgacgataa gcatccatct cagcagctaa tacttcagca atttttttat actcatcttg
     3421 ccgaagcgga gaactcaata acaatcttaa acgctgattt tcaaccttta gctgatcaag
     3481 caataataaa tcggcacttt tttctcttag ctgctctttt aataaattat tctcaagctg
     3541 taatttatta ttatcaataa aattgccact taccccatct aaaattgaac ggggggtatt
     3601 agcaaaataa tataatccac ttaccgcggt ttctaataga ttacgcgctt gaatcattaa
     3661 agagctacgc ccatcggaaa taatcagcat aatagaaaat atcactgcga taatcaggcg
     3721 catccctaaa gagggagctt tagcaaaaat aggtttcatt agagaaatat atgtgaattt
     3781 attgggaatc tataacgaaa attgacaata gaatcaatcc attgccaacc tccatttaaa
     3841 cagctgctaa gagaaatgta ttaatcatca atactaaata catcaccacc gtgcatatcg
     3901 atcatttcta atgctttacc accaccacga gctacacaag ttaatggatc ttctgctact
     3961 acgacttgca cgccagttga atcagaaagt aaacgatcta aattatgtaa taatgcacca
     4021 cctcctgtta acaccatacc gcgctcaaaa atgtctgctg ccaattcagg tgggcattgc
     4081 tctaagactg atttaactgc ctctacaata ccatttaatg gttgttcaat tgcttctaat
     4141 acatgtcttg agttaagctc gaaagtacga ggagcgcctt cagctaaatt gtgtccgtgt
     4201 acttccattg ttttaacatc atcatcggat tcaatcttag cactagcaat ttcttgttta
     4261 attcgctctg ccgttgcttc accaatagca gaaccaaaat gacgacgtac ataagcaata
     4321 atagcttcat ctaacttatc accaccaata cgcacagaag ttgaatacac aatgccgttt
     4381 aaagaaagca ctgccacttc ggttgtaccg ccaccaatgt caattaccat tgaccccatt
     4441 gcttcgtgaa ccggcaaacc tgcaccgatt gcagccgcca ttggctcttc aattaaatag
     4501 acttcacgcg ctcctgctcc aattgcagat tctttaattg cacggcgttc cacttgtgtt
     4561 gcacctgctg gcacgcacac taatacacga gggcttgggc gcataaagtt attactatgt
     4621 acttgtttaa taaagtgttg caacattttt tctgttacaa aaaaatccgc aatgacacca
     4681 tctttcattg gacgaatcgc cattatgctt tttggtgtac ggcctagcat taattttgca
     4741 tgtgagccta ccgccgcaat actttttagc gatcccatac gatcttgacg tacagcaacc
     4801 actgagggtt catctagcac aataccttga cctttaacat aaaccagtgt atttgctgtc
     4861 ccgagatcga tagaaagatc gtttgaaaat aatcctaaaa attttttaaa cataaaagaa
     4921 tccgttaaaa taaaattatt caaaaataag cacattttat agtgcgaaca ttgctactaa
     4981 tatagcaaaa aagcccgtca ttcatcaatg aaaaaattta aactccacta gaaaatttgc
     5041 agagcaagtt gataagtata aatcagtaaa ctaaaagcga taaagtacat aattagcccg
     5101 gtaacagcat ctaaaatttg ccaagttctt cgctttgcaa aataagggga aagtaagctt
     5161 gctccataac ctatgccaaa aaaccaaata aatgagcaaa gtaatgcacc tgctaaaaag
     5221 tatattttac cgttaaaatc taatttccca ccgatactgc ctacaatcac aaccgtatca
     5281 atataaacgt gaggatttaa gaatgtaatc gcaaaggtaa tcagtaaagc cttttttaag
     5341 ctcgttgcat tctctccact tgccacaagg tattcaccac ttttaaatac gctgataaat
     5401 gaacggctac cgtagcttaa tagaaaaatg gcccctaaaa gcgaaataat gaaacttaca
     5461 acaggcaatt ccgcaattaa cgtgcctaag cctagcacac ctatcgtcat taaaaataca
     5521 tcacctaaaa aacagagcaa tgcaatccaa aatatgtgtt gttttaaaat cccttgcttt
     5581 aataaaaagg cattttgtgc gccaatagag acaattaagc caaaacacac tataaatcct
     5641 tgaatgaaaa tatccatttt ttctccaaaa tcgcataaca agcggtcaat tatacaaaaa
     5701 attttgcaaa acttcggtat aatttatcga atactctttt gactgaatag gaaatttttt
     5761 atgactgata ctagccagac ttcatcttgc gttgtcattg cgattgccgg cgcatctgcc
     5821 tcaggtaaga gcctgattgc ctcaaccatc tataaagaac tcaaaaatga attgggaaca
     5881 gataatatcg gtattatttc cgaagatgct tattatagag atcaatctca tctaacaatg
     5941 gaagaacgga ttaaaaccaa ttacgatcac cctaattcaa tggatcatca tttattggtt
     6001 gaacatttac gccaattaaa acaaggtaat gcgattgaaa ttccagaata tgactatacc
     6061 gaacataatc gtaaaacgac cacgaagcac tttgaaccaa agaaaatcat tattttagaa
     6121 ggtattttat tgctgacaga tgagaatatt cgcaatgaaa ttaatgtttc tattttcgta
     6181 gatgctcctc tggacatctg ctttatccgc cgcttacaac gtgatatggt ggaacgtgga
     6241 cgttcgatgg aatcagtgat tagtcaatat cgcaaaaccg ttcgcccaat gttcttacaa
     6301 tttatcgaac cctctaaaca atatgctgat attattgtgc caaaaggtgg caaaaaccgt
     6361 attgccattg atattcttaa agcacaaatt aagcaattac taaaataaaa taggagctaa
     6421 atatgcgttt atgtgataca gatattaaac gttacttaga tgaaggtatt attgccataa
     6481 cgcctcgacc ttcagacgat aaaatttctg gcgccactgc agatgtgcgt ttaggtaatt
     6541 cgtttcgtgt atttcgtgaa cataaaacgc cctatattga tttaagtggc cctagagaag
     6601 aagttgccgc tcagttaaat aaagtgatga gtgatgaaat tatcatcggt gatgatgaag
     6661 catttttcct tcatcccggt gaccttgcac tcgcaacaac ccttgaatcg gtttccttac
     6721 cagccaatat cgttggatgg ttagatggtc gttcgtcact tgctagatta ggcttaatgg
     6781 tacacgttac cgcccacaga atcgatccgg gttgggaagg caaaattgta ttggaatttt
     6841 ttaatgctgg aaaattaccc ctagctttac gccctaatat ggcaattggc gcattaagct
     6901 ttgagatttt aagtggtgat gctgcaaaac cctataatgc gcgaaaagat gcaaaatata
     6961 agaaccagca aagtgccatt tcaagtcgga ttaatcaaga ttaatatagt acatgccttg
     7021 caatcataca ttaactatgt tagtttttta atcagtttat tacacagtaa ggagtataac
     7081 tatgttacat tatgcagtcg tattttttgt catcgctata atcgcagcgc tattaggatt
     7141 tggtggtatt gctggaagtg ctactgaaat tgccaaaatt ctcttttttg tctttttaat
     7201 acttactgtt atttcgttct tcttcaagaa aaagtgacac agttaaacct aattttttaa
     7261 gttaaaatat agttcaaaaa aacagttggt aatggatatt tataattatt cttaccaact
     7321 gttttgctat tatatctttt taagatgaaa tgctcgtctt ttgtttcact ttttatactg
     7381 ctttttattt ttataccatt tccagcctaa aaatagaata acaatgccta aaatggcaaa
     7441 aatgaggtgc tgcccattag ctacttgttc ttttagccaa tccaaattag atgccccata
     7501 gtcgcctaaa taaacccaaa ttggcacaga gataatagcg gcacagaaat caactaataa
     7561 aaattttacg aagctgactt ttctggtaat acctgaaact aagtaaacca ccgcgcgcaa
     7621 gccaggtaaa aaacgagcca taaaaagtag tttccatcct tgtttttcaa aacgttcttg
     7681 cacggttgca aaacgttcag gtgtcgcaac attcctgatt aatggaaatt tgagaatttt
     7741 ttcgccatag attctaccta gccagtacat tgtgctatcg ccaactaata ctcctaacat
     7801 actaacaacc agcatccaat gcacattggt gtagcctaat cctgaaataa caccaccgga
     7861 tactaacgta atatcttcag gaatcggcac accgaaacca caggcaagta gcacaagaaa
     7921 aacagcccaa taaccatagc tactaaaaaa ttcaatcaat gtttccatat tactccttaa
     7981 tgtttaaatt ccgaaccgat ttacgtttga ccaattcagg aaagaactct aatactttag
     8041 gctcttttgc gttttcgtta tcttcaatac gttctaataa taattctaat gctgccgagc
     8101 ctaagcgaga ttttgactga tggattgtcg taagaggcgg tgcataaaag cgtgagctat
     8161 gcacgttatc atacccgatc actgaaatat cttgcggcac attcagccct ttttcggtaa
     8221 tagctgaaat tgcccctagt gccattgagt cattaaaaca aaaaaccgcg gttggtaatt
     8281 tttcactgct cttaagcaaa ttattcatac actcataccc cccctcaggt tcaaaatcgc
     8341 cttcttgaat ccattcttca cgaatagaca aacccgcctc agatagcgct tttttaaaac
     8401 cttcaaaacg ggttcttgca atttctttat ctctattgcc ggtaattaca gcaatatctt
     8461 gatgcccgtt ttcaattaaa tgctgagtcg caatatagcc accttcaaca ccgtgatcta
     8521 aaataatatc actgcgttca tcacttcgtc cccaatccat aatcaccatt gggatattgc
     8581 tgttttcaaa gatatcaaat gaattagctg tatattcgga gcacatcacc aaaatgccat
     8641 caacccgttt tttgatgagc atatctaaat gattttgaat tttctcaagt ttgttttgag
     8701 tattgcacaa aaatagtgaa taccctttgc tatagcaaaa ttcctctacc gctaacacaa
     8761 tttcagcgaa aaacggtgat tcgctggttg taatgatcat accgatagat ttagtcgtat
     8821 taattttcaa actccgcgct acagcactag gagaatagtt cagcgcttta atagcctccc
     8881 aaactgcttt tgtagtgtcc tctgctacaa agcgggtttt gtttataacg tgagaaaccg
     8941 ttgtagtcga tacaccagca tattttgcga catcttttat cgttgccata cctttttcct
     9001 cctaaataag tagtggtgca ttataactga ttctaactga cttttattat aaagaaatag
     9061 atagaatgca agcggttgct ttttatcaag aatttgcaaa aaattttaca aatatcaccg
     9121 cttgttaggc tttaattgca atcattgagc caaaattaaa gcattgaaac caaagttcaa
     9181 cttgtgtaaa accagcttct tgcagacgtt ttttatgggt ttcaatacta tctgttcgca
     9241 tcacattttc caaagcatta cgcttttggc tgacttccaa ttcactgtag ccatttgctc
     9301 gtttgaatgt gtgatgaagg tcgatcaata gctcgttcat ttcctcactc tcaaaggtaa
     9361 atttttccga taacactaaa atgccattgg aatttaatcc ttgataaatc ttctgtaata
     9421 atgctaggcg atcttctctt ggtaaaaatt gcaaggtgaa attaagtacc accattgaag
     9481 catttttaat ttcaatgtgg cgaatatcat caagtaaaat cgtcaccggg atctcagagt
     9541 gataagcact taaatgggtt ttacaacgct caaccatcgg ctgagaatta tctaccccga
     9601 taatctgcac attcttcgca ttcacattac ggcgaataga taaaatccct gcgcctcgtg
     9661 aacaacctaa atcataaaca tttgaattat ctgtgacaaa acgctccgcc aacattccaa
     9721 tagcagtaat aatattggaa tagcccggca cggagcgttg gatcatatcc ggaaacactt
     9781 cagcaaccga ttcatcaaaa gtaaaatcgc ccaatttctc aatcggagcg gaaaataatg
     9841 tatctctttg catttttctc ccttattttt ctaaaaattt attgattgct ctcacaacag
     9901 ttcctgtttt ttctgcgtga acccaatgat cagcgtttgc cacaatgaaa gatttggcct
     9961 gcggaaattg tgccaaaatc gtttgtgtat gctctgcttg aatataatcc gataatgcac
    10021 ctttaataaa caaggtcggt ttatccacaa atacctgctg ccaccccatc acattctgat
    10081 aattatcttt tagcgcctgt aaattaaaac ggaaagattg ctcgctttgg gcatcaaaag
    10141 atttcaacat aaactgttgc acgccttcat ctcgaatata ttcagccatt atcgctttag
    10201 cttgctgacg attctggggt ttagcttctt tcaccgcaaa taaggctgcc ataacctgct
    10261 gatgccgatt ttgggtataa gtgaccgggg caatatcaat cactaccaat ttctccacca
    10321 gttcaggagc aaatgcagcc aatgccatcg cactttttcc gcccattgaa tgcccaacca
    10381 caatagcatt ttggatattt aattctgtga gtaattgtgc taaatcttgt gcaatcaaag
    10441 cataattcat ttcgtctgaa tgaaaagatc gcccgtgatt tctgagatca accattaaaa
    10501 tggagtaacg ttctgcgaat ggttttgcta ttgcgcctag gttatttaaa tctccaaaca
    10561 atccatgtaa gaagatcatc gtctgagcat tagcatgatt attcgaaggt tggtaattaa
    10621 agtttaactg cgatttttct gtcatataaa tgtcattgtt catataaatt ttcagcgatg
    10681 ttcctctata aaaaacaata gaaatgcgta taatagcaag cactattaac gcatttaata
    10741 cccgcagata tttgaggatc ccgatgaaac gaatcgaaat tgatgatgaa ttatatcagt
    10801 atattgcaag ccgtacacaa tctattggtg aaactgcgtc agatatatta cgccgtctat
    10861 tacgcctgcc acaatcgcct cagccttttg ttttagtaca agaacacatg atcaacgagc
    10921 ttaaagagct tgtcaaaacg ccttctcgtg ctacgaaaaa aaatgaatcc aatgcagaaa
    10981 aaaccgttga aaaattggaa aacattttaa attccgagca ttttatgaac gaaaataaaa
    11041 atgtagtgcg ttttactatg ctattagccg cattatatcg agcaaatccg gaggcttttg
    11101 ctaaagcaac cgaaaaagtg cgtggtaatg aacgtatcta cttttcgcaa agtgaagccg
    11161 aaattttagc tactgggagt ggagtaaaag ccaagcagat cccagattca ccgttttggg
    11221 taattaccaa taataatacc gcacgcaagg gacttattct caaaggcgta atggaatcca
    11281 tgaaagtacc aagccagtta atcgaacgca ttcaagcgct ttttatctaa ttaattgaaa
    11341 tgctcatcaa ttctactcgc tttcctaccc aattttgggc tgctcattca gcccaaaatg
    11401 tggcgattat ttgggaaaaa ggaacatcag actatcttaa ccaccttcca tcaaacatca
    11461 cttggtatag tttgaatcag ttgattgcgc aagctatttt cgtgttgcaa caacaaggtg
    11521 ctactccgca cagtttgatt gcctattgtg gttctcatcg gctcattggc ttgctcactt
    11581 attgtgctag ccttgctttg ggggctaaga ttctaatgct taaccctgct caaacagcaa
    11641 gtcaacgaca agcagtctta gatgacaatg gtgttgagct cattattaat gatgccgact
    11701 ttgcaaaatt ttcagcaaaa acgaccgctt gtaatgcctt ccctacgatt gattttgaaa
    11761 aaccagctac cctaacccta acctcaggct caagcggtaa acctaaagca gtggtgcatt
    11821 ctatagcggc ccatctctat agtgccgaag gagtatgtga attaatggca tttgagcagc
    11881 caaactcttg gctactgagc ttgcctctgt ttcacgtttc cggacaaggc attatttggc
    11941 gttggttatt taaaggtgca acactgtatg ttcacgaaga caaaagtgat ttttttcttt
    12001 cagcacaaaa agtgagccat ctctctttag tccccaccca attacaacgc tatttaaacc
    12061 aattagattc tatggtcagc caaaaatgtt tactgggtgg atctatgctt ccagccgaat
    12121 tgattgctca agcacaacaa tctgggatga ctaccttttc aggctacgga atgactgaga
    12181 tggcatcaac catttgtgca gtagaaaatg atttaaacag tgttggtttt ccgttaaaac
    12241 atcgggaact aaaattagaa aatggtgaaa tttgggtaaa aggcaaatca ctcggcttag
    12301 gctattggca aaaaaatggg caaattcgac cgcttgtaaa cacacaaggc tggtttgcca
    12361 ctaaagatcg tggcgaatgg aatcacaaaa aacagcttgt aataaaagga cgattggata
    12421 atatgtttat ttcaggaggg gaaaatatcc aacctgagga aattgaacaa ctgatttttc
    12481 gttctcagct tgtcgaacag attatcgtgt tgccgattga agataagcaa tttggacatc
    12541 gaccagtggc gttcttacaa ttcaagcaat ctgattcaaa aaatgaactc cataaattaa
    12601 aaatttggct gtctgataaa ttagaaagat tcaaacagcc tgttgcctat tatttactgg
    12661 atatagaaaa ataccaaaaa caaggcttaa ttaaactatc aagaacacaa ttacaacaag
    12721 atttaaaact caaagtatta aaggaaatct atgtttagac cgattttaaa aacatttgtg
    12781 cttagtttag gcttaatgct aaatagttat gcattagctg aattgccaac ccaacaggta
    12841 gtgcaaacgc agttagatag cgccaaaaaa ttagatcaag ccgatgcgga taataaggca
    12901 ttggttcaaa cacttgaaga tacgcttgct ttcttagccc aaattgataa acaaaaagca
    12961 gataatcagg cattgaataa atctattcaa gattcccaaa aagcattaaa aacaagccaa
    13021 cataatcttg aaaaattaaa agaggtgact attgcaagtg tcgataattt aacacaaaaa
    13081 gcgacaacag atttacaaaa agagttaacc tctacacaat ctcagctgga aacagtacaa
    13141 cacgatttaa gtattattaa taataattta gttgcacaaa ataccgcacc ggataaggct
    13201 caaacggcct taaccgagat ggttaaacgt aaacaggaaa ttagtagcca actttcagcg
    13261 actaacatta aaaatgaact acagacaaag ttagaagtag aattagaatt aatagaatta
    13321 aaaaacactt acaatcaaat attacttggt ggcagcgagg atttatctgc gctttactct
    13381 gctcaattag atgaaaaaaa gcaagagcag caaaatctac aagcagaaat tgcaaacctg
    13441 cagactgcta tcaacaataa aattgtagaa gagtctcaga acaagctaga tcaagcacaa
    13501 gcggttcaaa atcagcaaaa taatgcaacg acgaacccag ttatcttgcg tgaattggat
    13561 ataaatacca aagtcacaca agagttgcta aaacagacca aagatatgac gcagttatca
    13621 caagataatt tgcgaatcaa aagtgtgcta gataacttac agcaaaccca acgtaatatt
    13681 gaagaacaaa tcagttctct gcaaggtacg ttggtgcttt ctcgtattat taataagcaa
    13741 aaacaatcat taccacaaga tgaaatgatt tccggactat caaaacaaat tgcagattta
    13801 cgtgtacgtg tttttgatat cactgaattt aaagactctt ttgcggacat aaatgcttat
    13861 atcagccgca tagagcaaga tgaaaaaaca acctttacga gtaaagagaa agaacaactg
    13921 agtaaaattt tacaggaacg ttctgacact ttaactgaga tgattaaatc attaaataat
    13981 cagctcaatt tattaatcaa tattgaacta aaccagcaac aagtgcagac cattagtgat
    14041 gcgttacagc aaaaactgca acagcaaagc ttctgggtta aaagtaacaa ccccattgat
    14101 cttgaatggt ttagtaaatt tgtcgatatt acccactatc aatttattga tattggaaaa
    14161 aaactcaatt tttcaaattg gcgggataat ttattacctg caagtatttt agtcggaatt
    14221 ttattgctat tagccatctt tattaatcgc caaaaagata aaattaaaca aaaattacac
    14281 caaattaata atcgactaaa aattgtcgcc acagatagcc aatggaacac ccctcttgct
    14341 attttttgga cattagtgct ttgcctgcca agtacactaa tgttcttagc cggatttgtt
    14401 gctatcactt atatttcatt tgaaaatcct caggaagtct ggacttgggg attaaaaatg
    14461 gcaatttatt ggctgtattt tgccttttta gtggcgatgc tacgcccgca cggcatagga
    14521 catattcact ttaatatgcc acaaaaaagt aatgaaatct tccgtaatat tttaaaacgt
    14581 tcggtatgga tcattgcttt attactgaac acctctattt ttacaaactt agagatggga
    14641 atatcttacg acatgcttgg acaaacaatg actatttttg tccttatatt aatgatttgg
    14701 atgattgtac cggcatttag gcaagctatt tctacctatg agaatgtcac aacagaagag
    14761 aaaaaagaat ctaaaagtat tttactcact attgtcaaat tagtgctact gcttgcccct
    14821 atcattctta tcattctgat tgcattgggc tattactata ctgcactggt gatcattgag
    14881 catttagtag attcttattt tgcgatcatt acttggatta ttattcgtaa tattctctat
    14941 cgagcattct ctatttcatc acgccgtctg gcttacagac gtttacaaga aaaaagagaa
    15001 gcagctgaag ccaaaacacg agctaaagca gaacaaaatg atgaaaaccc ggacggtgtc
    15061 gagcttcctt ttgagctaaa agaagactct attgccgtaa gcgaagtcaa gaaccaaatg
    15121 ttgaaattaa ctgattttgt gctttggatt ggcttatttg tgctgcttta ctgggtttgg
    15181 tcggacttaa ttactgttgc actctaccta gacggcgtta ccttatggca acaaagtgtt
    15241 acaacagaag ccgggattgt aatggaatcc attaccctgc tgaatttact cactgctatt
    15301 ctgattattg tggtaatggt ggtactcatt cggaacttat ccggtttact tgaagccctg
    15361 attttctcgc acttcaagtt atcgcaaggt acaccataca caattaccac actcttaacc
    15421 tatttgatta ttgcgttagg ggcaatcttt gcgttcggta cattagggat gtcttggagc
    15481 aagctccaat ggctactaac tgcactttct gtcggtctgg gttttggtat gcaagagatc
    15541 tttgcaaact tcgtttcagg gattatcatc ttgtttgaac gtccaatgcg gattggcgac
    15601 accattacca tcggcactta cagcggtacg gtttccaaaa ttcgtattcg tgccacaacc
    15661 ttagtcgatt ttgacggcaa agaagtgatt gtaccaaaca aagcattcgt aaccgaacgc
    15721 ttggtgaact gggcattaag cagcaccgca acccgcatta ttgttcaagt cggcgtggct
    15781 tacgggtctg atttagaatt agtcaaacgg ctgttattac aagtggcgga agaaaatccg
    15841 aaagtcttga aagatccaca accaagggct tatttcctta cctttggtgc aagcacttta
    15901 gatcacgaat taagagccta tgtgaacgat ttatctgatc gtaacccaac tattgatgca
    15961 ctaaatacac gcatccacca gctctttaat gaacataata ttgatattgc atttaaccaa
    16021 ttagatgttt atatcaaaaa caacgataca caagatgaaa ttaaagtaga ttcaaaacgc
    16081 tttgagtttg aacgaccaaa taacataaca gcaaaagaaa aggaataaca atggcaggca
    16141 acagcatcgg acaattattt aaagtgacca ctttcggcga atctcacggt attgcattag
    16201 gctgtatcgt agatggcgta ccgccgaata tggctttaag cgaagcagat ttacagccgg
    16261 atttagaccg ccgtaaaccc ggtacttcac gctacaccac gcctcgccgt gaagatgatg
    16321 aagtgcaaat tttatcggga gtctttgaag gcaaaacgac gggaacaagc attggtttaa
    16381 tcattaaaaa cggtgaccaa cgctcacaag actatggcga cattgccgaa aaattccgcc
    16441 cggggcacgc agattatacc tatcagcaaa aatacggcat tcgagattac cgtggcggtg
    16501 ggcgttcttc tgctcgggaa accgcaatgc gggttgccgc cggggcgatt gccaaaaaat
    16561 atttgcgtga gcaatttggc attgaagtgc gaggctacct ctcacaaatc ggcaatatca
    16621 aaattgaccc gaaaaccgtt gaaaatattg aacaaattga ttggcacgca gtcaatagta
    16681 atcctttctt ctgccccgat cccgttgcga ttgaaggctt tgatgcctta attcgtgagc
    16741 tgaaaaaaga gggcgattcg gtgggggcaa aattaaccgt gattgcagag cgtgtacctg
    16801 tagggttagg cgaacctgtg tttgaccgcc tagatgccga ccttgcccac gccttaatgt
    16861 cgatcaacgc cgtgaaagcg gtggaaattg gcgatggttt tgcagttgtg gaacaacgtg
    16921 gtagccagca ccgagatgag atgacgccgc aaggctttct ctctaatcac gccggcggaa
    16981 ttttaggtgg tattagctcc ggtcagccga ttatcgctca tattgcgtta aagccgacct
    17041 caagcattac tattcccggc agaagcgtga acaaaaacaa cgaagccgtt gaagtgatca
    17101 ctaaaggcag acacgacccc tgtgtaggta ttcgtgctgt gccgattgca gaagcgatga
    17161 tggcgattgt actactcgac catctgttaa gatttaaggc tcaatgccgt taaacacata
    17221 aaattggaaa aatgaaatta ttaaaaacac ttttagtctc aagccttgct tttacagcta
    17281 ccgcactgaa tgcaacgcaa tgggagaaaa tcaaaactcc ggttcaagga aaagcacaat
    17341 ctatcggcgg ttatagtaac ggctgtatta ttggggcaca gccccttgca ttaaaaggcg
    17401 aaggctacca agtgatccgc tcggctcgta accgctatta cggacaccca caactgctcg
    17461 attatctcac tcacttaggc aaaaaaacca aagctgccgg tgtgccgacc attttaatcg
    17521 gcgatatggg aatgcctgcc ggtgggcgtt ttgcctccgg tcacgcctcc catcaaaccg
    17581 ggctggatgc tgatatttgg tttaagttcg gaccgatgga cgatgaaacc gcccgcaatc
    17641 cagcagggct tgccaccatt atggtaaacc gtagtaccga gcgggttgat gattcactct
    17701 ggaatcaaca ccatactaat ttagtaaaac ttgctgcaac cgatcctcga gtggatcgca
    17761 tttttgtcaa tcctgccatt aaagtgaaac tctgccaaac cgcaggcaat gatcgtgctt
    17821 ggttacgcaa aattcgcccg tggtacggac acgactccca tttccacgtc cgtttaacct
    17881 gcccggctga tgccgcaagt tgtgaaaatc aagcccttgt gcctgccggt gacggctgtg
    17941 gtgaagagct ttactcgtgg tttgagccga aagaagcctc cggcacacca aaagccaaag
    18001 tgctacccac agcgcctgtt caatgtcaga tgattttatc tgaacaaggc ttgaattaat
    18061 tgcaaaataa caaccttttt tgaccgcttg tcagcccaca agcggttcat tttcttaaat
    18121 aatttacgat tatgcgttta tttgttgccg aaaaacccag ccttgcccga gcgattgccg
    18181 atgtgttacc aaaaccccat accaaaggag atggctttat ccaatgcggc gaacacgaca
    18241 ctgttacttg gtgtatcggt catttattgg aacaggctga acccgatgtc tatgatgagc
    18301 gtttcaaaat gtggcgaatg gaacatttgc cgattgtgcc tgaacaatgg aaattgattc
    18361 ccaaaaaaga gacgctcaag cagtttaaag tggtggaaaa gctgattaaa aaagccgatg
    18421 ttttagtcaa tgccggagac ccggatcgag aagggcagct gttggtggac gaagtttttg
    18481 gctatttgaa tttatctgct gaacgcaaaa gccaaattca gcgttgtttg gtaagcgatc
    18541 tcaacccgaa tgcggtgagc cgagccattg aaaaattgca aaaaaacagc gattttatac
    18601 cgcttgcaac ctctgctctc gcccgagcca gagcggattg gctgtatggt atcaatatga
    18661 cccgagccta taccctacag gggcgttggg caggctataa aggcgtgtta tcagtcggac
    18721 gtgtgcaaac gccggtatta gggctgattg ttcgccgaga tctggagatc gagcatttcg
    18781 tgccaaagga ttattttgag gtgttggcac agattgtcgt gccggaaacc caagagcgat
    18841 ttaaggcgca gtggcaaccg agcaaagcct gtgaagatta tcaagatgaa gatgggcggg
    18901 tgctgtctcg tccattggca gaaaatgtgg taaaacggat taccgaccag ccggcaaccg
    18961 tcaccgaata tcaaaataaa attgaaaaag aaactgcacc gctgccttat tctctttcgg
    19021 tattacaaat ggaagccgcc ggcagatatg ggctatccgc ccaagcggtg ttggatattt
    19081 gccaaaagct gtatgaaacc cataaactaa ttacctaccc tcgttctgat aatcggtatt
    19141 tgccgaccga acatttcaac gacagattta aagtgatggc ggcgattgct catcatttac
    19201 ctgaatatca acaaaaaccg gaagtgattg atgccactat tcgcaatcgt tgctggaatg
    19261 ataaagaggt ggaagcccac cacgccatta ttcccactgc acggcaaggg acggtacatt
    19321 taaccgaaaa tgaaaaaaga gtttatcaac tcattgcccg ccaatatcta atgcaattct
    19381 gccctgatgc ggaatatcgc aaaagtaaaa tcgggcttga aattgcaggt ggtagttttg
    19441 tcgctcaagc acgcaacctt gtaattgccg gctggcgagc gttactgggt aaagaagata
    19501 gccttgacga tgcagagcca ctactaccga ttgtcaaaaa agggcaaatc ctccattgtg
    19561 aaaaagggga aattgtcagc aaaaaaacac aaccgccccg ccactttact gatcgcagtt
    19621 tgctttcagc aatgaccggg atcgcccgtt ttgtacaaga taaagaattg aaaaaaatct
    19681 tgcgtgaaac cgatggttta ggcacggagg caacccgagc cggtattatc gaattgctgt
    19741 ttaaacgtgg ttttttaatc cgtaaaggga aaaatatcca cagtaccgaa gccggcagaa
    19801 tattgattca agcacttccc gactctgcta cccagccgga tatgaccgct cattgggaaa
    19861 tgcagctgaa tcaaatcagc aaaaaagaga ccagctatca gcaatttatg tttgatctaa
    19921 accaacagct cccacattta ttacaaagcc caaaccgcca agtgttgcaa aatttagcga
    19981 aaatcacacc gcttgcaagc ggcaataaac ctcgttattt taaaaagcga acacaaactg
    20041 ctgaaaatta aatcaagcag gtaaaaatta ctgtttagca cttgtcaaac gggcgtaaat
    20101 tctatattat gcacgccatt gcaaatttcg cataaagaat acaagagaat aaattaatgt
    20161 taattaatgt actcactatt gtttatcttg tagttgccgt attactgatc gcatttgtat
    20221 taatgcaaca aggtaaaggc gctgatgcag gtgcttcttt cggggcgggt gcttcagcaa
    20281 cagttttcgg ctcagcagga tcagcaaatt ttttatcaag aacaactgct ctacttgcaa
    20341 cgattttctt cgcaattagt ttagttatcg gtaatttaag ctcacacaat gtagcaccga
    20401 aaagccaatt tgaagactta agccaagttg aacaaaagca agtagaacct gtaaaaatag
    20461 aaaatagcga tatccctcaa taatcgctta acattaaaaa gaataaagct ctggtggtgg
    20521 aattggtaga cacgccatct tgagggggtg gtggacacag tccgtgcgag ttcaagtctc
    20581 gcccagagca ccattcaact aaatttggct caacggagct aaactaaaaa agccttagaa
    20641 agcctgtaaa atcaacattt acaggctttt ttactatctt aactcaacgg ctctaaacgt
    20701 ttcctatcac aaattttagt tacacgttta gttacacgtt ttaaatcgtg ttactatact
    20761 ttcaataatc gtgtaacact tcgtaggttt aatttatggc tagaacaact aaagcattaa
    20821 ataaaactca aatagaaaat gccaaatcaa aggataaaga atatatttta tccgatggcg
    20881 atggattaaa tcttagagtt aaacctctcc ctaaaggctc taaaatttgg atttttaact
    20941 acactaaccc acaaactaaa aacagaacaa atttaactat tgggcgttac cccttaatta
    21001 cacttgcgga agctcgcact atatgtgatg gctaccgctc gttaatagag aaaggcatag
    21061 atccacagga agaaaaaaag cggctgcaac aagaagcaga aaatcgagta aatgatactt
    21121 tccggaatgt ggccgaaagc tatttcaatg gtatttataa agagaaagca aaaaatccga
    21181 ttactcgtga aaagaattgg ataaggttag aaaatcatat tttcccctat atcggggata
    21241 aacacgttga agaaatcaaa gtaaaagccc ttgttgatat ttattctaaa gtggcagata
    21301 aaagcaacac attaaaaaaa ctgcatcagc ttgtatctgc tgtaatggat cacgccatta
    21361 cgcaaggcat tatagaaagc cataactgcc gattagcagt taaaaacttt tatatcaagc
    21421 catctacgcc aaatcccact attgagcttg aagaattacc gcagttattt actgatttac
    21481 ataatgcgaa gttatcaaag caaacttacg cccttgtttg ttggtcgttc ttgactgctc
    21541 tacgcccaaa tgaagccgtt aatgctgaat ggaaagaaat agactttgag aaaaagctat
    21601 ggaatatccc taaagagaag atgaaaggaa aagcagataa aaaacgccct cactctgtgc
    21661 cgttatcctc ccaagcgtta aagatattag agatgatgaa aatgcactct aattctagcc
    21721 cttttgtttt tccaggtcgt tcatcaaata gtaaaccaat gagcaacgca acggtaaatt
    21781 caacattaaa aaggaatgga tataaagata gactaaccgc acacggtatt cgggcatttg
    21841 tgaaaacatt tctatcttct cgcaaagtag atcgccacgt ttccgaaagt atattatccc
    21901 atttattaga aggtggagat gatttagaaa acacatacaa ccgatatgat tttttagaag
    21961 agcgtgtgcc agtaatgcag cttttaggtg attattgcga acagtgcgga atgaatttag
    22021 agttagttcg gggttaggga ggtaaaatat atgattttag tcgtcacgtc atcacttttc
    22081 ccactttccc ctttaaaatc aaatagttaa gtggtgatga ctggttttaa agtcatcatt
    22141 aagtcatcac aaaaaggtga tgacctagaa aaaaagaggg gtttccccct ctttgctaat
    22201 tcaaaatatc actttgaaag tcatcaaaat ttttgaaatg aacgtttgtt cgttgccctt
    22261 tattcgtctt tcgttttgtg aaatcgtgct tattgccgtg ttgctttact gcttgctcaa
    22321 tacctactac aaaagtattt aagcctagtt ctagcacatt cttagcctta acaaaggcta
    22381 aatatgccgg ataaaggtgc gttcttattt tgtcgtgtcc aagcgtgttg ccagttccga
    22441 tataaagccc gtctgtattt tctgttgtat atagatactc gaaaaaatcc gttaatgggt
    22501 cagactgctt tttaatctcc aacgcctcta ggctctcttt ttgctcctct aaggctcttt
    22561 tagcttcgag tgggtcaggg aaggtatcaa gcactttacg gataatgccc cctatctcta
    22621 atgtaatttt atccataaaa tacggatcac gttcattttc aggcggtctt ttattaaaac
    22681 ggaaattgac aatccgccta tctataccgc cattccgttc tgtccattta caagggtcgt
    22741 tattgacgat cataatcatt gccgcaattc ttgcgttaaa tgggtgcttg ttcttcggat
    22801 cgactcgcac catatcaccg ccagtaatcg ctttcaatcc gccaccatct ccagcgtatt
    22861 tcgtttgctc ggaacagata atcagctttt tatcttccag ccctgcgatt ttgcgttcat
    22921 catcaaagtt ttctagcctt gctgaagctg tgttcttttc tccagctaat agtgtcgcaa
    22981 tgccagcaaa taccgattta ccgcttccgc ctttccctgt tacttggaag aatacttgcc
    23041 agttgtagcg gtttgttaaa atcgcataga gagcggctag aatgttcttc gccttgtctt
    23101 gcttgccgtc tgatacaaag ttaagccatt gatcaaagtg tggtgtttcg gctacgttct
    23161 cgtcatagct atgtggaata taagccgtta gccagttttg gcggttaacg gttctttgaa
    23221 catttaccga ataaggtggg taaggggtta aagtttcggg ttgccccttg ctattccaac
    23281 caatcaccgt agccggttgt acttccattt tttgaagcgt gccgaatggt cgggttttat
    23341 cgttggctgt cgtgcgtgga taagctaaga agcctttagc ttgttttgtg cctgtaccgt
    23401 tggttaaatc ggtttcttca gtttcgacaa aggattctga aatttcttca gtcagccagc
    23461 ctagaatatc tacaccacca aagtctaaaa tctcttgcgt ggttttcggg taagcgtaaa
    23521 tattatgaac ggcaatcgtt acttcattca ttttcggggt ggcggtttcg gtgcgtgctt
    23581 cgccttcacc gatatgattt accgctgcac cgccagccga tactaatttt ttatattctt
    23641 tgccttgggt cagtttcacc acgttagcaa tttgtcgcat aacagaatca tctgttaggc
    23701 gtttcattac ttgcttgtca agttccggaa tcactgaata gccaccgtct gcccctccat
    23761 ttgtattcgt agcaagcgaa cgcaattcgc ctgttttaat ccagtggcga agctcgtcat
    23821 cagatacttt cacatttgcg gtttcaacct gttgccccgg ttggttacgc tgttcatcag
    23881 taatcgcttc ataacgtgcg atttctttta ctaaattttc agcttgtgag cggagttcat
    23941 caaacttagc cccttctgct tcagttgttg agcgtttttc ttcgtctgct ttggttaaaa
    24001 ttgaacgcat ttctgcttca atagccgctt tttgttggcg gagttctaaa agttttttaa
    24061 acattgcctt atccttaatt caaataattg atattgtagt gaagcgttgc tgttttccac
    24121 gctgattcgt tagcatcata atcatagcta tacttagcca gcacacattc gtccatactg
    24181 tggaatgtgg cttgattcat cacatcactg attttttgag ccactaaatc taggtcgttt
    24241 tcggttgaaa acattggtaa gtaaatgccg attttcaaat aggcgttgca ttcgccatcg
    24301 caaagcgtga gttggctata ttccgcttca tcaatgaata cggcgatagc cggtaattca
    24361 ttttctacat cggtgaatac ggctcggccg ttatggaaat gttgaatgcc ttgaatgtta
    24421 ccttgtaata agtcgataac ttcttggcgg attgcttcgt tagaaatcat aaaaaagtcc
    24481 tcttaattaa gaaggctaca attagccaca gaacaatata ggcataattt caacggagta
    24541 aatagggtaa aatttaatcg tttagctacg tttgaacacg ttaagaggat aatttttaaa
    24601 tgattatttt ttattcaaca aaagacaaaa tggaaggaaa taaacgaata attttataga
    24661 agtgatgact gtgactactt agtgacgact taaaaataag tagtcactat attaatatgt
    24721 tgatatataa gggatttttc tattttagtg atgaggtgat gacttgtttt ataaaataat
    24781 tttctctaag ctaaaccact tgatataatg ccaaaaa
//
LOCUS       DANLXD010000026        24422 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.026, whole genome shotgun sequence.
ACCESSION   DANLXD010000026 DANLXD010000000
VERSION     DANLXD010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 24422)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24422)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24422
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.026"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..549
                     /locus_tag="PXD18_000866"
     CDS             <1..549
                     /locus_tag="PXD18_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2572 family protein"
                     /protein_id="HDL6301316.1"
                     /translation="LSDQYNFLALYPQDKTQICQKFQKEQISQADLSDKQFRFLQYQF
                     ACQFHSLFKDKKPTKEKYIHFTHLADYLDLSNVPNQEIYTIHSLAELPSSSEREPKIV
                     LAKNAINENLPQEFYGIVITDYLFDITGKKMYGTLYSSYDNAREERNLTFKKEVLAEL
                     EARYSAWRYLPYSEHLMGAVDD"
     gene            542..835
                     /locus_tag="PXD18_000867"
     CDS             542..835
                     /locus_tag="PXD18_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5374 domain-containing protein"
                     /protein_id="HDL6301317.1"
                     /translation="MIKYKAETALSLLVAITLFAIVVLSFSQWQSAQNHRLNQHFQQQ
                     QAVMILENQLALKLAGLDCESSITQNQIRYQIQCSGNRLTIRFPLGKIELNND"
     gene            884..4174
                     /gene="recC"
                     /locus_tag="PXD18_000868"
     CDS             884..4174
                     /gene="recC"
                     /locus_tag="PXD18_000868"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HDL6301318.1"
                     /translation="MFTLYQSNQISSLAEMLVKIQQVNPLEDPFEPETILIQSQGMAQ
                     WLQMQIAELNGVMGNCDFLYPTTFLWQQYRLLFPELPKENIFERSSLVWRIMRLLPSC
                     LTLSEFAPLKRYLGDQPNKEQYQLKLYQLSAKIAELFDQYLVYRPHWLVSWEEGNLQA
                     IENEIKIATAAKPIDFDLIRADMKWQSHLWQQIVSDLQSESDEQVFTTSHRAYLQQNY
                     FAKLDDLTETEKAKLPKRIFIFGISSFSPLQLAVFKKLSEHCDIHLFFFNPSEKYWGD
                     SVEEKVWQKLALSHKISQDDLDNLLAEQRNKLLNLWGKQGRDFLAQLIEFEPNTMDVF
                     VEPEENSNLNKLKKQIFSLENDATITDLTADNSLQIHSCHSPMREVEVLHNQLLNLFE
                     QDSTLLPKDIIVMSPDINKYAPYIDAVFSRYNTGNRDPRYIPFSLSDQAFTQVDPIIH
                     SFLQLLAMKESPFNAEELFDLLEVNAIQTRFGFSTEDIHTLRVWVRNAGVRSGVEIEQ
                     PHWQNYNSWENGLNRLLLGSSLKEEQGIWENTLAFGDSYGLNAELVGRLASFIEALLA
                     WVNFLQTPQPLAAWQQAIKNLTADLYQENAENAASILLLNNVNDQIIEQISATHFSDD
                     LQIEVLALLFEQQLSQHSQQLNFLVGRVNFATLLPMRAIPFKVICLLGMNEADFPRQQ
                     QINSFDLMQYAPKKGDRAKRDDDRYLFLEALLSAQQMFYISYIGQSQKDGKEMLPSIL
                     VSQLLDAMNEALTPECKQQLSDEVEVLVRKQPLSVFSKKNFTHPRDHAYNAEWIIKPT
                     VAVQDFLSEPLTNESVASLELDELISFVQNPIRFFFLKVLGISFNTYDDTIDESEIFE
                     MSGLDNYRILNELLTINLAQQQRFFAEEQLKGNLPASYFAQIATQDLIGKITEMQAAL
                     SHYLASESRILSVNREVELERQTLTLNGNIANLYQNEVVLWRVGHLRDKDKIQTWIYH
                     LLLCAYFPEKTVKFYYREGEQVGVLSFETVSQIEALSQLSIYLNAYLDGLSQAQLVIY
                     DRIEEYLKGDGTNSEQVLIDLAEKDERDGSYLHRLLAQTKELDSQAIHQRTQSWFSLM
                     NQKIAKGD"
     gene            4310..7255
                     /gene="ptrA"
                     /locus_tag="PXD18_000869"
     CDS             4310..7255
                     /gene="ptrA"
                     /locus_tag="PXD18_000869"
                     /EC_number="3.4.24.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin"
                     /protein_id="HDL6301319.1"
                     /translation="MKLSFLTQFVAAAFALNVMTYPAFAEVAKNSEKTTASQPQSQLG
                     FELIKQSINKSPNDKAIYQGIKLDNGMEVLLISDSQANKSLMSAIIPIGSMDDPISQQ
                     GLAHYLEHMILMGSKNYPETNSLDGFLTKNGGMNNASTASHRTAYYLQVNNEAFSEAV
                     TRLADTLAFPLLLETNAKKEVNAVNAEMVRAKSHDGHLLHSVNLATANPAHPATKFAV
                     GNKETLSDKPDSKLQTELEQFYKQHYSANLFKVVLYSNQSIEQMAKLAANTLGKMENK
                     HFSIPQTAEPRYRDEDKSVFIQYKPVKSNKMLVIGFDFPNDEMQFKHKTGKYIAYMLN
                     NNTDGTLSDYLIKQGLSDGGIEAVSSANIGRDRGSFDIYIELTDKGLSEQDQIISLVF
                     QQIEKIKQEGIQESYFSEVKESLKQDFQHLQVEKNMDFVEFIADQMLHFPLEHVIDQP
                     YLTETMDNEAIKAKLAAMNIDNARIMLVSDTAKTDKKTPYFEAGYSVAKITQEQKQKW
                     LDFSKNPQLNLPELNPYFTTDFTLNKVETGLTKPKLINDQAGNLIYTMPSVYFTNEPK
                     AKIGVGFNIRPRKDDLKSLTAASILGYMNNLAQTKLDFQSSVAGMNLSLAPAANGLAL
                     SAEGYTQNLAKLMLDSVKQFSRFEFNEDVLAQAKQRLHQELDRNEKENSLNQANAALS
                     RFASYPYFDVPKQREMIDSITLADIEQLRQRILQQSSGFKLLSVGNLSAEQVSALAED
                     LQAVIKNQKSANATGQYVDVSTSQRKINVIKSVPNEDNALLMAFMPNGYNELESLTRA
                     KLLRSIISRWYFDDLRTDKQLGYVVYATDNIIGKTAGIQFMVQSPNTTPAGILEHNER
                     FFTQSFERLKNLSDEEFGKYRDSLVEKLQYKPESLAEEFSEFGSDFSRNNPKFDRLQQ
                     VIELTKALTKADIVAFYQKAVIEKQGFVFVSQAVGTKTKAEDVAKFDGFEQIESIEKL
                     QREFEIKDY"
     gene            complement(7304..8950)
                     /locus_tag="PXD18_000870"
     CDS             complement(7304..8950)
                     /locus_tag="PXD18_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6301320.1"
                     /translation="MKFPTLTKISASVLAVLALAACDDKSNENKPTAAAAKPQTEKTF
                     VNCVSRSPTGFSPILMMDGLSYNASSQQIYNRLVEFVPGTTDIEPALAESWEISEDGL
                     TYTFKLRKGVKFHSNKDFTPSRELNADDVVFSFNRQLDKNHPYHTVSNGTYPYFNAMK
                     FPTLLKSVEKVDDSTVRITLTKRDASFLSSLGMDFTSIYSAEYADKMMKAGIPEAVDT
                     TPIGTGPFVFSGYVLDQASRYVANKEYWKGKPDIDRLIFEIVPDATTRYAKLQSGQCD
                     LMDFPNATDIEKMKNDPKINLLSQPGLNIAYVAFNTEKAPFDNVKVRQALNLAVDKKA
                     IIDVVYQGNGFAAKNPLPPTIWGYNDSLADSEYNVEKAKQLLAEAGFPNGFETELWVQ
                     PVVRASNPNPRRMSEIIQADWEKIGVKAKLVTYEWGDYIKRTKAGELTAGTYGWSGDN
                     GDPDNFLSPLFGTPNIGNSNYARFTNPELDALLEKALGSSDKAERTKLYEQAQVILRE
                     QAPWINVAHSINFAPTSKRVEGYKQSPFGYTYLYPVKIVD"
     gene            9026..11116
                     /locus_tag="PXD18_000871"
     CDS             9026..11116
                     /locus_tag="PXD18_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
                     /protein_id="HDL6301321.1"
                     /translation="MIFANQSIELDTVNVIATRDPSKFADTPQKQTKDALLVKQATSV
                     AAALKALPNVDVQGGARAIVQKPSIRGLSDNRIVQVIDGVRQNFDLAHRGSYFVPMSL
                     IQEIEVIKGPSSSLWGSGALGGVVAMRTPNALDLLKNNDKFGAKIRQGYQTANNLSET
                     EASVFAANDRFDALLSGFYNNADNLRSGEGKELNNTGYKQAGGLVKFGWQINDTHRLE
                     LSHRHSQFKQTAPGNNEVENQFTDNDVSAQISAWHAANPGNPSNPVYLAKMLAFYGQL
                     HSSLGSVSYLSDQKITDKSTSLNYYFNPSNPYLSTQVTLYSNSTTENEHRKISGVEDQ
                     TKLSTRGVNIRNHSELSWFSLVYGVDYMLDKVATQRGRNNTDAQYRANPYDAKSKTTG
                     AYLIAHIPLFDEKVVFSPSVRYDRFDTSSETVKYKDSHWSPAAKLTWKATNWLDLTAK
                     YNEAFRAPSMQERFVSGSHFGTTVRGLPINNIFLTNPNLRPETAKNKEVTFNVHFDNV
                     ISQGDKFNFEATYFRNDVKDLINLQVFKANPTSPMEFIPTRSQYQNIANARLSGIELQ
                     TRYQTERLAVFANYGSTKGKDKDSGEALSNIAASKIGFGVNYAVVQDKFTVGANVTRY
                     QAQHRVPKNHGVTYQGYTLTDLHATYAPLKGEWKNLRLDVAVENLFDKKYQPAFSLME
                     GSGRNVKLSAAYSF"
     gene            11187..12875
                     /locus_tag="PXD18_000872"
     CDS             11187..12875
                     /locus_tag="PXD18_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDL6301322.1"
                     /translation="MKFYPSLIASAVSFAVVLSGQAAVNVPDAGSLQRELDQRQAQQK
                     VKPSGEWFNQAAKAPYTATDGQELTFPLTQVQVFDRTNQEISTPELAPILANYVGKAV
                     SLTDLSNLANEITEFYRSHNYLVAKAILPPQEIEQGKVKILLFKGNVGEVRLQNQSAL
                     SDKFVARLANTTVNGSEFILKDELEKFALTMNDVPGVNTGLELSAGKQAGEANLLIKL
                     QNAERFSGYVSADNQGNKNTGRYRLATGIKANNLIGWGDELKVDLMSSNNANLKNARL
                     DYSSLIDGYATRLGLTANYLDYELGGNFKALQSQGHTHNLGAYVLHPTIRLPDFRLNT
                     KVSFNHQRLTDKQQAVNVAQKRQVNSLTVGINGSWNSLKDGTSYFSLSALFGNLANHT
                     NEQAHYVATDFQPKSRFTVYQYSLSHEQALPKSFAFNLGVNGQFADKTLDSSQKMLLG
                     GLYGVRGHQAGVASVDEGHLVQTELKHYLPLFSKSLLTSSVFYDYGWGKYYKHSGFLA
                     RGVNNSVKLQSIGAGLSLSEAGSYAINASVAKPLGKKIENADKHQFWFSAIKTF"
     gene            12887..15703
                     /locus_tag="PXD18_000873"
     CDS             12887..15703
                     /locus_tag="PXD18_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HDL6301323.1"
                     /translation="MFKRNAISLCILTACSGLAYANTADLPQGERVRVGTATIERTTD
                     KMTVNQSSNKVQIDWNSFDIGKNKEVEFKQPTEMAVAYNRVTGGNASQIQGKLTANGK
                     VYLANPNGVLITKDAEVNVGGLLVTTKDLEKISENGTKDKFSRKLAKEGKILNQGKIT
                     AKGERAFVVLVGDDVANEGEINAKNYYHKETKKVTECYDDSWSLVKQCYDFDKEIVKS
                     TSGEVHLSSGENVTFTLSDRYIDVALDDNTVNSIIKNDGAIIANGDITLTAKGRNQAL
                     DSLIINNGVLQANKVQNKNGTIILSAGETQLHEKSQIKGEKVSFAEASYYGPTEDIKV
                     VSKTGSKVTAPVIDFKGKTVNIQGEFGREDSTDLYNDELQILKTTVNIEVPNTEDIRI
                     ADTDNGGSGSFIQAGALASLLANNGRVNVQGKGFDVSGKLNVNAFKQTDSVLKFINQA
                     GINIHNADIHANGRLFFVTNLPNDTDFQSNIRITDSKINLGNGSMGFGRSSKRWEMHD
                     VVRRADTELRKKFNLDMKNVELNQVDDFVVAGGFQQVNLDNVKARGKTNFYLDSGNSR
                     MFVGEQIYEYGVTDIEKRTQLANLDQRRKRWNSDNYDETDLNWEYNQRFDGFAAKHNH
                     RAPIADTEINIANSDISLDNGFVHLMAEKINLDDSKINITFNQDNSLDESTQINRLGL
                     NGKVSMKNSHINVVGDEKDGISPARHYATMFLVGELLGEKSSIFLKSHQGAVLRTDSN
                     VTIAGKNSKDDLKITAITTGKKMGNEIIGPDGLPTSEDNDANASNTAFAIGYEPNATA
                     IVENASITALAPNGGLAYTGTSKTQIDAKDNATFTFFEKPRAGYDKLLGDIKGNPDKL
                     TPRDFARLYDNIKGIKASSLSEQQLGLADTAKKTSEHTLANSLDVENLVSVTVCDEQN
                     KCEERMLGNKNTNAKVIVGDIKFE"
     gene            15826..15957
                     /locus_tag="PXD18_000874"
                     /pseudo
     CDS             15826..15957
                     /locus_tag="PXD18_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587011.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(16012..16773)
                     /locus_tag="PXD18_000875"
     CDS             complement(16012..16773)
                     /locus_tag="PXD18_000875"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HDL6301324.1"
                     /translation="MKLNQAQIQNALICGQAVVFDEIDSTNEYLLTHHQRLENGTVCL
                     AEKQTAGRGRRGRTWYSPESENLYFSILWHYPMEQAADLPPLSLVVALIIAESLTVQN
                     VKDIQIKWPNDIYYQGKKMGGILLETQANRNGLDVVIGIGLNLGMAKVDENIVTQAWA
                     DLSQYHFNRNELVCRLAYELQKNLKIYPLVGFAHYAERWQSFDLFRHKAVKLITEAEE
                     IHGISQGINEQGELILKQGDNLRYFGIGEISLRAD"
     gene            complement(16785..17816)
                     /gene="murB"
                     /locus_tag="PXD18_000876"
     CDS             complement(16785..17816)
                     /gene="murB"
                     /locus_tag="PXD18_000876"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HDL6301325.1"
                     /translation="MMKHSLTPFHTFHLPAKATQIIEFTTVEQLLSEWQKAFNAQLPI
                     LILGQGSNVLFLEDFDGVVLVNKLKGITHHEDEHFHYLHVQGGENWHELVKWTLAHNI
                     AGIENLALIPGVASSAPIQNIGAYGVEFEQVCDFVEVLNLRSGELFKLSKSECEFGYR
                     ESVFKHQYRDEFAIISVGLKLAKAWKPVLSYGSLAQLNPETVTPIQIFDEVCAVRSSK
                     LPNPDEFGNAGSFFKNPVISNEQFAPIQAKFPAIPHYPQADGTVKLAAGWLIDQTGLK
                     DLQIGGAAVHTQQALVLINKENATGQDVLALAKTVRQRVKEKFGVEIQPEVRFIGKNG
                     EVDSEKITR"
     gene            complement(17920..18594)
                     /gene="crp"
                     /locus_tag="PXD18_000877"
     CDS             complement(17920..18594)
                     /gene="crp"
                     /locus_tag="PXD18_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010787261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cAMP-activated global transcriptional regulator
                     CRP"
                     /protein_id="HDL6301326.1"
                     /translation="MQDMTLSTAPLENVTPPPSIHDPAVEWFLTHCHIHRYPAKYTLI
                     HAGEDAESLFYIVNGSVSVYIKDDETKEMLLTNLGTGEFVGELSLFEEKVQQRTAYVR
                     TKGPCEIAEISYKKFKQLVHLNPDILMYLSAQMARRLRQTSRQVGNLAFLDVAGRIAQ
                     TLLNLAKMPDAMTHPEGMQIKITRQEIGQMVGCSRETVGRIIKMLEDEGLISAHGKTI
                     VVYGAR"
     gene            complement(18656..18874)
                     /locus_tag="PXD18_000878"
     CDS             complement(18656..18874)
                     /locus_tag="PXD18_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheU family protein"
                     /protein_id="HDL6301327.1"
                     /translation="MIIPWQELEESTLHNILDSFILREGTDYGERELSLAEKRERLLT
                     QLKADKVVIVWSELHESLDIKDKKSFLG"
     gene            complement(18877..19482)
                     /gene="slmA"
                     /locus_tag="PXD18_000879"
     CDS             complement(18877..19482)
                     /gene="slmA"
                     /locus_tag="PXD18_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion factor SlmA"
                     /protein_id="HDL6301328.1"
                     /translation="MTEPKIKMPKKSVVERRQQVLEVLISLLNSEEGMQRITTERLAA
                     AVGVSEGALYRYFPSKTKMFEALIEKIEQTLTSYIHANKRQDSSANSVRAILYVILEF
                     ARKNPGVTRILTGHALMFEEELLKARVAKFFDNLELQFANILQLSKLRERKSFEDERA
                     LAGYLVNFCEGQFLRLVRSNFSYNQHQHFEKQWAFIKPLFD"
     gene            complement(19494..19949)
                     /gene="dut"
                     /locus_tag="PXD18_000880"
     CDS             complement(19494..19949)
                     /gene="dut"
                     /locus_tag="PXD18_000880"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014550997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HDL6301329.1"
                     /translation="MKQIDLKILDSRIGNEFPLPAYATEGSAGLDLRAMLNEPLTVKA
                     GETVLIPTGISIYIADPNLAAVILPRSGLGHKNGIVLGNLVGLIDSDYQGELKVSLWN
                     RSQADFTVNVGDRIAQLVFVPVVQASFNIVQEFEQTDRGEGGFGHSGKQ"
     gene            complement(19983..20822)
                     /locus_tag="PXD18_000881"
     CDS             complement(19983..20822)
                     /locus_tag="PXD18_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HDL6301330.1"
                     /translation="MKKYNIVFSADKNYLPYLEIALKSLLAHHNHLSIFILSTGDISH
                     HWIETLRPYLENRYSTLRLGYLDSNNLANFNSNGYITNSTYLRYYIEELFEHSDSPYW
                     IYLDCDLVVNGNITDPFTNLDFSFGSIAAIADPYVNKLKNHPYIYKNYFNAGVFYLNA
                     KHFSKQPFIQLTERFKENLPFGDQDILNYCFQYNWIELDRKYNYQTEHLLDDIAQQKI
                     SPNYIPHIIHFTGGIKPLEGKFNSSYVENVASLFRFYHNTSWEILTELPLGTIQLKPF
                     ITE"
     gene            complement(20809..20991)
                     /locus_tag="PXD18_000882"
     CDS             complement(20809..20991)
                     /locus_tag="PXD18_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HDL6301331.1"
                     /translation="MKIMQLTSNQYINDIKHILLSARQKAYQAVNSAMVEAYWKIGER
                     IVQEEKNMVKDQNEKV"
     gene            complement(20988..21305)
                     /locus_tag="PXD18_000883"
     CDS             complement(20988..21305)
                     /locus_tag="PXD18_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301332.1"
                     /translation="MKLLVSHFHQGEGKFPTFSAGTAVRLGSECVNYPNWFACEIDGW
                     KTFVPSHFISEDKLICDYNPTELVAAQGERVEFLELHYQWAIVKRENEIGWLPCEILR
                     VIG"
     gene            complement(21305..22507)
                     /gene="coaBC"
                     /locus_tag="PXD18_000884"
     CDS             complement(21305..22507)
                     /gene="coaBC"
                     /locus_tag="PXD18_000884"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HDL6301333.1"
                     /translation="MLQNKKILVGISGGIAAYKTIEFIRHLKKANAEVRVVLTPAAEA
                     FVTPLTLQAISGNAVSTSLLDPQAELAMGHIELAKWADLIVIAPASADFIARLRMGMG
                     NDLLSTLCLATASPILLAPAMNQQMYKQIAVQENLSVLVNRGVQLIGPNSGFQACGDV
                     GAGRMSEPEEIYQAVLAHFSNNQDLEGLNVTITAGPTREAIDPVRYISNHSSGKMGYA
                     IANAFAERGAKVTLISGPVNLPTPKNVERINVESAVEMEQQAVKFAQKSAIFIGCAAV
                     ADYRMAAVSDQKIKKTDANDELTLKLVKNPDIIANVANLAENRPFVVGFAAETQNVAE
                     YAKSKLERKNLDMICANDVSGGQVFGQDQNALHLFWKNGEKTLPLADKSKLAESLVQE
                     IVKHYREK"
     gene            22657..23394
                     /gene="radC"
                     /locus_tag="PXD18_000885"
     CDS             22657..23394
                     /gene="radC"
                     /locus_tag="PXD18_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HDL6301334.1"
                     /translation="MEEKMNDFFDEDSQEPTMMPREKLLTQGAASLTDSELLAIFLRT
                     GTKAVPVLALAESVLMAFGSLRQLLNANIDDFCKIYGLGKTKYIQLQASKEMTKRYLA
                     QQMEFSEMIQAPYMAIMYFQTELEEEEREVFMVLFLDNQNRLIYKEKMFFGTINQTAV
                     HPREIIKRALKYNAAAIIVAHNHPSGSCLPSESDRSLTKKIEMACELVDIRFVDHIIV
                     GKGDYFSFEEEKLEMKEHSFLQISDRK"
     gene            23626..23862
                     /gene="rpmB"
                     /locus_tag="PXD18_000886"
     CDS             23626..23862
                     /gene="rpmB"
                     /locus_tag="PXD18_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004997628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HDL6301335.1"
                     /translation="MSRVCQVTGKRPAVGNNRSHAMNATKRRFLPNLHTHRFWVESEN
                     RFVTLRLTAKGMRIIDKKGIDAVLAEIRARGEKI"
     gene            23874..24044
                     /gene="rpmG"
                     /locus_tag="PXD18_000887"
     CDS             23874..24044
                     /gene="rpmG"
                     /locus_tag="PXD18_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDL6301336.1"
                     /translation="MAAKGAREKIRLVSTAETGHFYTTDKNKRNMPEKMEIKKFDPVV
                     RKHVIYKEAKIK"
     gene            complement(24125..>24422)
                     /locus_tag="PXD18_000888"
     CDS             complement(24125..>24422)
                     /locus_tag="PXD18_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDL6301337.1"
                     /translation="HSLTLLENINPDIAFVSCNSWSLEKGVTAPTEEKANLKRMLQQN
                     AKQKVLVADSSKYGKYSLFRATQLDNFTQIITDKGLPIEYSQALSSNDFKLSLV"
BASE COUNT         7314 a         5009 c         5227 g         6872 t
ORIGIN      
        1 ctttccgatc aatataattt tttagcgtta tatccacaag ataaaacgca aatatgccaa
       61 aaatttcaaa aagagcagat cagccaagcg gatttatccg ataaacaatt caggttttta
      121 cagtatcaat ttgcctgcca attccatagt ttatttaaag ataaaaaacc gactaaagag
      181 aaatatattc actttaccca tttggcggat tatttagatt tatcaaatgt gccaaaccaa
      241 gagatttata ctattcattc tttagctgaa ttacctagta gcagtgaacg tgagcctaaa
      301 attgtgcttg ctaaaaacgc aattaatgaa aacttaccgc aagagtttta cggcattgtg
      361 ataaccgact atctgtttga tattaccggc aaaaaaatgt acggcacgct ttattcctct
      421 tatgataatg cccgagagga gcgaaattta acgtttaaaa aagaggtact ggcagagctt
      481 gaggcgaggt attccgcttg gcgatatttg ccatattccg aacatttgat gggagcggtt
      541 gatgattaaa tataaagcag aaacggcttt gtcgcttttg gttgccatca cgctatttgc
      601 gattgtggtg ttgagtttca gccagtggca atcggcacaa aaccacaggc taaatcaaca
      661 tttccaacag caacaagcgg ttatgatttt agaaaatcag cttgccctca aattagccgg
      721 gttagattgt gaatcaagta ttactcaaaa tcagattcgc tatcagattc aatgctctgg
      781 caatcgctta accattcgct ttccgttagg caaaattgag ctgaataatg attgaatcgt
      841 ccctcgcttt ggaggacaat aattcaatta gcgaggcgtt attatgttta cactttacca
      901 atccaaccaa atttcatcac tggcggagat gctggtgaaa atccagcagg taaacccact
      961 tgaagatccg tttgagccgg aaaccatttt gatccaaagt cagggaatgg cacagtggct
     1021 acaaatgcag attgctgaat taaacggtgt gatggggaat tgcgattttc tctaccctac
     1081 tacattttta tggcaacagt atcggctgtt gttcccggag ctgccgaaag agaatatttt
     1141 tgagcgtagt tcgttggttt ggcggattat gcggttattg ccgagttgct tgacactatc
     1201 ggagtttgct ccgctaaagc gttatttagg tgatcaacct aataaagaac agtatcagct
     1261 taagctctat caactttctg ccaaaattgc cgaattgttc gaccaatatt tggtgtatcg
     1321 cccccattgg ctggttagct gggaagaggg caacttacaa gcgatcgaaa atgagataaa
     1381 aattgcaact gccgctaagc cgattgattt tgacttaatt cgagccgata tgaaatggca
     1441 aagccattta tggcaacaga ttgtatctga tctgcaatcg gaatctgatg agcaggtttt
     1501 tactacctcc caccgtgcct atttgcaaca aaattacttc gctaagttag atgaccttac
     1561 tgaaacggaa aaagccaaat tgccaaaacg cattttcatt tttgggattt cgtccttctc
     1621 gccattacag ttagcggtgt ttaagaaact cagcgagcat tgcgatattc acctgttctt
     1681 ttttaaccca agcgaaaaat attggggcga cagtgtggaa gaaaaagtgt ggcaaaaatt
     1741 ggcgttaagc cacaagattt cgcaagacga tctggataac ttattggcgg agcaaagaaa
     1801 taaactactg aatctttggg gcaaacaagg gcgggatttc ttagctcaat taatcgaatt
     1861 tgagccgaat accatggatg tctttgtcga accagaggaa aacagcaacc tcaataaact
     1921 caaaaaacag attttcagct tagaaaatga cgccactatt accgatttaa ccgccgataa
     1981 ttcactccaa attcattcgt gccacagccc aatgcgggaa gtggaagtgt tgcataacca
     2041 gctcctgaat ttgtttgagc aagatagcac tttgctgccg aaagatatta ttgtgatgtc
     2101 gccggatatt aataaatacg ctccttacat tgatgcggtg ttttctcgct acaatacggg
     2161 taatcgggat cctcgctata ttcctttttc attatccgac caagcattta cgcaggttga
     2221 tccgattatc cacagtttcc tgcaactgct ggcaatgaaa gaaagcccgt ttaatgccga
     2281 agaactgttt gatttactgg aagtgaatgc gatccaaacc cgttttggct ttagtacgga
     2341 agatattcat accctgcggg tttgggtgag aaatgccggc gtacgttcgg gtgtagaaat
     2401 cgagcaacct cactggcaaa actacaattc gtgggaaaac gggctaaacc gtttattgct
     2461 tggctcaagc ctgaaagaag agcaggggat ttgggaaaac acccttgcct ttggggatag
     2521 ctatggctta aatgccgagc tggtggggcg acttgcctct tttattgagg ctttattagc
     2581 gtgggtaaac tttctgcaaa cgccacagcc gttggcagcg tggcagcagg caataaaaaa
     2641 tttgactgct gatctgtatc aagaaaatgc cgaaaatgct gcatcaattt tattgttgaa
     2701 taatgtgaat gatcagatta tcgagcaaat ttccgcaacc catttttcag acgatctgca
     2761 aattgaggtt ttagccttat tgtttgagca gcagctcagc caacattcac agcagcttaa
     2821 tttcttggtc ggacgggtga attttgccac cttgcttccg atgcgggcga ttccgtttaa
     2881 ggtaatttgc ttgctgggta tgaatgaggc agatttccct cgccaacaac aaatcaatag
     2941 ctttgattta atgcagtacg ccccgaaaaa gggagaccgt gccaaacgtg atgatgaccg
     3001 ctacttgttc ttagaagcct tactttccgc tcagcaaatg ttttacatca gctatatcgg
     3061 gcagtcgcaa aaagacggca aagagatgct accgtcgatt ttggtttccc aactgttaga
     3121 tgcaatgaat gaagctttaa cgcctgaatg caagcaacaa ttaagcgatg aagtggaagt
     3181 tttggtcaga aaacaacctt taagtgtgtt tagcaaaaag aattttaccc acccacgaga
     3241 tcacgcttat aacgcagagt ggattatcaa gccgactgtt gccgtacaag attttcttag
     3301 tgagccttta accaatgaaa gcgtggcttc gctagaactt gatgaattaa tctcttttgt
     3361 acaaaacccg attaggtttt tctttctaaa agtgttgggg atttcgttta acacttatga
     3421 tgacaccatt gatgaaagcg aaatttttga gatgtcgggg ctggataact accggatttt
     3481 aaacgaatta ttaacgataa atttagcaca acagcaacgt ttttttgccg aagagcaact
     3541 caaaggcaat ttacctgctt cttattttgc tcaaattgcc acacaagatt tgatcggcaa
     3601 aattaccgaa atgcaagcgg cgttaagcca ctatttagcc agcgaaagcc gtattttgag
     3661 tgttaatcgg gaggttgagc tggaacgcca aaccctcacc ctaaacggca atattgccaa
     3721 cctatatcag aatgaagtgg tgctatggcg agtagggcat ttacgagata aagacaagat
     3781 tcagacttgg atctaccatt tattattgtg tgcctatttc cctgaaaaaa cggtgaaatt
     3841 ctattaccga gagggtgagc aagttggtgt gttgagcttt gaaaccgtct cgcagataga
     3901 ggcattatcg caattaagca tttatttgaa tgcttatttg gacggattat cgcaagccca
     3961 gttagtgatc tacgaccgaa ttgaggaata tctcaaaggt gatggcacaa acagcgaaca
     4021 agttcttatc gatttagcag agaaagatga gcgagacggc agctatctcc atcggcttct
     4081 cgctcaaact aaagagctgg attctcaagc gattcaccaa cgtactcaaa gctggtttag
     4141 cttaatgaat cagaaaatag cgaaaggcga ttaactacaa gcggtcgttt ttggctgaaa
     4201 atttgcaaaa tgagaaggcg aataataatt cgcctaccta taaaaataga attttttccg
     4261 tattttactg tcaatttatt actacaatgc taatttcaaa aggagatgta tgaaattatc
     4321 ttttcttacc caattcgttg cagcggcttt tgccctcaat gtgatgactt accctgcatt
     4381 tgcggaagtt gcaaaaaatt ctgaaaaaac gaccgctagt caaccccaat cccaactcgg
     4441 ttttgagctg attaaacaga gcattaacaa aagcccgaat gataaagcga tttatcaagg
     4501 tattaaactt gataatggaa tggaagtgct actgatttcc gacagtcaag cgaataaatc
     4561 gttgatgtct gccattattc cgattggctc aatggatgac ccgatttctc agcaaggttt
     4621 agcccactat cttgagcata tgatcttgat gggctcgaaa aactatccgg aaaccaacag
     4681 cttagacggt tttttaacca aaaatggcgg tatgaataat gcctcgactg cttctcaccg
     4741 cacggcgtat tatctacaag tcaataacga agcctttagc gaagcggtaa cacgactggc
     4801 ggatacgtta gctttcccgt tattgctgga aaccaacgcc aagaaagagg ttaatgcggt
     4861 caatgcggag atggtgcgag ctaaatcgca cgatgggcat ttattgcaca gtgttaattt
     4921 agccaccgca aacccggctc atcctgctac caaatttgcg gtaggcaata aagagacgtt
     4981 atctgacaag ccggatagca aattacaaac cgagttggag caattttata aacagcatta
     5041 ttctgcgaat ctgtttaaag tggtgcttta ttccaatcaa tcgattgagc agatggcaaa
     5101 attggcagcc aacactttag gcaaaatgga aaacaaacat ttcagcatac cgcaaaccgc
     5161 tgagccacgt tatcgtgatg aggacaaatc ggtatttatt caatataagc cggtgaaatc
     5221 caacaaaatg ttagtcattg gctttgattt tccgaatgac gaaatgcagt ttaagcacaa
     5281 aaccggtaaa tatattgctt atatgttaaa caataatact gacggcacgc tttcggatta
     5341 cttgattaaa caggggttgt ctgacggcgg tattgaggcg gttagcagtg ccaatatcgg
     5401 gcgggatcga ggctcgtttg acatctatat tgaactgaca gacaaaggtt tgagcgagca
     5461 agatcaaatt atttcattgg ttttccaaca aattgagaag atcaaacaag aaggcattca
     5521 agagagctat tttagcgaag tgaaagagag cctgaagcag gatttccaac atttgcaagt
     5581 ggaaaaaaat atggatttcg tggaatttat tgccgatcaa atgctccatt tcccgttaga
     5641 acacgttatc gatcagcctt atctgaccga aacaatggat aacgaggcaa ttaaagcaaa
     5701 attggcggca atgaatattg ataatgcccg cattatgtta gtcagcgata ctgccaaaac
     5761 cgacaagaaa accccttatt ttgaagcagg ttattcggtg gcaaaaatca cgcaagaaca
     5821 aaagcaaaaa tggctggatt tcagtaaaaa tccacagctc aatttgcctg aattgaaccc
     5881 gtatttcact accgatttta ccttaaacaa ggtcgaaacc ggcttaacta aaccgaaatt
     5941 gattaacgac caagcgggga atttaatcta tacaatgccg agcgtgtatt ttaccaatga
     6001 accgaaggct aaaatcggcg ttggctttaa tattcgcccg agaaaagatg acttaaagag
     6061 cctgaccgca gcgtctattt tgggttatat gaacaattta gcccaaacca agttagattt
     6121 tcagtcttcg gtggcgggta tgaatttaag tttagctccg gcggcaaacg gtttagcctt
     6181 aagtgcagag ggttataccc aaaatctggc taaattaatg ctagacagcg taaaacagtt
     6241 cagccgcttt gagtttaacg aagacgtgtt ggcacaggct aaacaacgtt tgcaccaaga
     6301 gctggatcgt aacgaaaaag aaaacagcct taatcaagct aatgcagcat taagccgttt
     6361 tgcctcttac ccttattttg atgtgccgaa acagcgtgag atgattgata gcattaccct
     6421 tgcggatatt gagcaactac gccagcgaat tttgcagcag agcagcggct ttaagttgtt
     6481 atcggtgggg aatttgtcgg ctgagcaggt ttctgctctg gcagaggatt tacaagcggt
     6541 cataaaaaac caaaaatctg caaatgctac cggacagtat gtggatgtga gtaccagtca
     6601 gcgtaagatt aatgtgatta aaagcgtgcc gaatgaagat aatgcgttgc taatggcatt
     6661 tatgccgaac ggctataacg agctggaaag ccttactcga gccaaattgc tcagaagcat
     6721 tatttcccgt tggtattttg atgatttgcg tactgataag caactaggct atgtggttta
     6781 tgcgacagat aatatcatcg ggaaaaccgc cggtatccag tttatggtac aaagcccgaa
     6841 taccacaccg gcagggattt tagagcataa cgaacgtttc tttacacaaa gtttcgaacg
     6901 tttaaaaaat ctatctgatg aggaatttgg aaaatatcgt gatagcctag tggaaaaact
     6961 gcaatataaa ccggagtctt tagcggaaga gttttctgag ttcggttcag actttagcag
     7021 aaataacccg aaatttgacc gcttgcaaca ggtgatcgaa ttaaccaaag cactcaccaa
     7081 agcagatatt gtggcatttt accaaaaagc tgtgattgaa aagcaaggct tcgtgtttgt
     7141 cagccaagct gtcggcacca aaaccaaagc tgaagacgtt gcgaaatttg acggttttga
     7201 acagatcgaa agcattgaaa agctacaacg agagtttgag attaaggatt attagagagt
     7261 tattagagag agttaggggc gaaaaatttt cgcccctcat tttttaatcc acaattttca
     7321 ccggatataa gtaagtatat ccgaacggac tttgtttgta gccttcaaca cgtttgctgg
     7381 ttggggcaaa gttaattgag tgagccacgt taatccacgg agcttgctct cttaagataa
     7441 cctgtgcctg ctcgtataac ttagtacgtt ctgctttatc agatgagcct aatgcttttt
     7501 ctaataacgc atctaactca gggttagtaa agcgagcata gttactgttg ccgatatttg
     7561 gcgtgccgaa tagtggcgat aagaagttat ccggatcgcc gttatcgccc gaccaaccgt
     7621 aagttccggc ggttaattca ccggctttgg tacgcttgat gtaatcaccc cattcatagg
     7681 tgactaattt tgcttttacg ccgatttttt cccagtcggc ttgaataatt tcagacatac
     7741 ggcgtgggtt cgggttagaa gcacgcacca caggctgcac ccataattcg gtttcaaaac
     7801 cgttcgggaa gcctgcttca gctaatagtt gcttcgcttt ttccacgtta tattctgaat
     7861 ccgctaagct gtcgttatag ccccaaatgg ttggcggaag tgggtttttc gccgcaaaac
     7921 cgttaccttg gtaaactaca tcaataatcg cttttttatc cactgctaag tttaacgctt
     7981 ggcgaacttt cacgttatca aacggagctt tttcggtatt gaatgccaca taagcaatgt
     8041 tcaaacccgg ttgagaaagt aaattgattt tcggatcatt tttcattttc tcaatgtcgg
     8101 ttgcatttgg gaagtccatt aaatcacatt gaccggattg taatttcgca taacgggttg
     8161 ttgcatccgg cacgatctca aaaatcaaac ggtcaatgtc aggcttacct ttccaatact
     8221 ctttgtttgc tacataacga ctggcttggt ctagcacata accgctaaac acaaacggac
     8281 ctgtgccgat tggcgtggta tctaccgctt caggtatgcc ggctttcatc attttatccg
     8341 catattccgc cgaataaatg gaggtgaaat ccataccaag gctggataag aatgacgcat
     8401 cacgtttggt taaggtaata cgaacggtgc tgtcgtccac tttttccacc gatttcaata
     8461 atgtcgggaa tttcattgcg ttgaaatacg gataagtgcc gttagagacg gtgtgatacg
     8521 gatgattttt atctaactga cggttaaatg aaaatactac atcgtccgca ttcaattcac
     8581 ggcttggagt gaagtctttg tttgaatgga atttcacgcc tttgcgtaat ttaaaggtgt
     8641 aagttaagcc gtcttcgctg atttcccagc tttctgccaa tgccggttca atatcggttg
     8701 tacccggcac aaattccacc aagcggttgt aaatttgttg cgagctggcg ttataagata
     8761 aaccgtccat cattaaaatc gggctaaaac cggttggcga acggctaacg cagtttacaa
     8821 aggttttctc ggtttgcggt tttgctgctg ccgcagtagg tttattttcg ttgcttttat
     8881 catcgcaagc cgctagagct aataccgcta aaacgcttgc actaattttg gttaacgttg
     8941 gaaatttcat attattctcc gcttaatctt aggattaact tacgaagatt accttttcca
     9001 caatgaggag taaagaacaa aaagcattat ttttgcaaat caatccatag aattagatac
     9061 cgtcaacgtc attgccaccc gtgatccaag taaatttgcc gatacgccac aaaaacaaac
     9121 taaagatgca cttttggtaa aacaagcgac gagtgtggcg gcggcattaa aagcgttgcc
     9181 gaatgtggat gtgcaaggag gggcccgtgc gattgtgcag aagccgtcta ttcgtgggtt
     9241 gagcgataat cgtattgtgc aggtgattga cggagtgcgt cagaattttg atttggctca
     9301 ccgtggttct tattttgtgc cgatgtcatt gattcaagaa attgaagtaa tcaaaggtcc
     9361 aagcagctcg ttgtggggga gcggtgcctt aggtggggtg gtggcaatgc gcacaccgaa
     9421 tgcgttggat ttattgaaaa ataatgacaa attcggggca aaaatccgtc aaggttatca
     9481 aacggcgaat aatctttccg aaaccgaagc ctcggtgttt gcagcaaatg atcggtttga
     9541 tgccctgctg agtggtttct acaataatgc tgacaatttg cgtagcggtg aaggcaagga
     9601 actgaataac acgggctata agcaagccgg cggtttagta aaattcggct ggcaaattaa
     9661 cgatactcat cgtttggaat tatcccatcg tcatagccaa tttaaacaaa ctgcaccggg
     9721 taataacgag gtagaaaatc aatttaccga taatgatgtt agtgcacaaa ttagtgcttg
     9781 gcatgcggct aatcctggaa atccaagtaa tccagtatat cttgcgaaaa tgttagcctt
     9841 ttacggtcaa ttacattcaa gtcttggtag tgtgagttat ttaagtgatc aaaaaattac
     9901 cgataaaagc acctcactta actactattt caacccaagc aatccttatt tgagcacaca
     9961 agtgacatta tatagcaata gtaccactga aaacgaacat cgaaaaataa gtggtgtgga
    10021 agatcaaact aaactaagca ctcgtggtgt gaatatccgt aatcattccg aattgtcttg
    10081 gttctccttg gtgtatggcg tggattatat gttggataaa gtagccactc agcgtgggag
    10141 aaataatacg gacgcacaat accgtgctaa tccttatgat gctaaatcta aaactacagg
    10201 tgcttattta attgcacata ttccgctgtt tgatgaaaaa gtggtctttt ctccgagcgt
    10261 gcgttacgac cgtttcgata cttcaagtga aacggtgaaa tataaagaca gccattggtc
    10321 tcctgctgca aaacttactt ggaaagcgac aaattggttg gatttaaccg cgaaatataa
    10381 cgaagctttc agagcccctt ctatgcaaga acgatttgtg agcgggtctc attttggtac
    10441 cacagtgaga ggattaccta ttaataatat tttcttaact aaccctaatt tacgcccgga
    10501 aacggcaaaa aataaggaag taaccttcaa tgtacatttt gataatgtca tctcgcaagg
    10561 agataaattt aactttgaag cgacttattt ccgtaatgat gtgaaggatt tgattaatct
    10621 tcaagtattc aaagcaaatc ctacaagccc aatggaattt attcccactc gttcccaata
    10681 tcaaaatatt gcgaatgcac gtttgagtgg tattgaatta caaactcgtt atcaaactga
    10741 acgtttggca gtttttgcta actacggtag tacaaaaggt aaagataaag acagcgggga
    10801 agccttgtcg aacattgctg caagcaaaat cggcttcggg gtcaattatg ccgtggtgca
    10861 agacaaattc acggtggggg caaacgtaac ccgttatcaa gcacaacatc gtgtgccgaa
    10921 aaaccacggc gtgacttacc aaggctatac gctgaccgat ctacacgcca cttacgcccc
    10981 attaaaaggc gaatggaaaa acctgcgttt agacgtggcg gttgaaaacc tattcgataa
    11041 aaaataccaa ccggcattca gcttaatgga aggcagcggt cgtaatgtga aactcagtgc
    11101 ggcttacagc ttctaatgtc tttaacggaa gacggcacaa gcggtcgttt tccggttatt
    11161 ttttgcaata ttaaaaggga gttactatga aattttatcc gtcgctgatc gcaagtgcgg
    11221 tcagttttgc cgttgttttg agtggacaag cggcagtgaa tgtgccggat gccggctcgt
    11281 tacagcgtga attagaccaa cgtcaagctc aacaaaaagt caaaccgagt ggcgaatggt
    11341 ttaatcaagc ggcaaaagca ccttataccg caacggacgg tcaagaactg acatttccat
    11401 taactcaggt acaagttttt gatcgaacca accaagaaat ctctaccccg gaattagccc
    11461 cgattttggc aaactatgtg ggtaaagcgg tttcgctgac cgatttaagc aacttggcaa
    11521 atgagatcac cgagttttat cgtagccaca attatctggt ggcaaaagcc attttaccgc
    11581 cacaggaaat tgaacaaggt aaggtgaaaa tcctgttgtt taaaggcaat gtcggtgaag
    11641 tgcggttaca aaatcagagt gctttaagcg ataaatttgt tgcacgcctt gccaacacca
    11701 cagtgaatgg ttcggaattt atcctaaaag acgaattgga aaaatttgcc ctcacgatga
    11761 atgatgttcc cggggtgaat accggcttgg agctttctgc cggtaagcaa gcaggcgagg
    11821 cgaatttgct gattaagctc caaaatgccg agcgtttctc aggctatgta tcggcagata
    11881 accaaggcaa taaaaatacc ggacgttacc gtttagccac agggataaaa gccaataatc
    11941 tgataggttg gggcgatgag ttgaaagtgg atttgatgag ttccaacaac gctaatttaa
    12001 aaaatgcgcg tttggattat tcgagcttga ttgacggcta cgctacccgt ttgggcttaa
    12061 cggcgaatta tctcgactac gaattaggcg gtaactttaa agccctgcaa tcccaagggc
    12121 atactcacaa tcttggggct tatgtgttgc acccgacaat ccgcttgccg gattttcggt
    12181 taaacaccaa agtcagcttt aatcatcaac gtttaaccga caaacaacaa gcggtcaatg
    12241 tggcacaaaa acgccaagta aacagcttaa cggtgggcat taacgggtcg tggaattcgc
    12301 ttaaagacgg cacaagctat ttctctctgt ctgccttgtt cggcaattta gctaaccaca
    12361 ccaacgagca agcgcattat gtggcaacag attttcagcc caaatcccgt tttacggtct
    12421 atcaatacag cctgtctcac gaacaagcgc tgccaaaatc ctttgccttc aaccttggcg
    12481 tgaacgggca gtttgcggat aaaaccctcg acagctcaca aaaaatgtta ctgggcggtt
    12541 tatacggcgt gcgtggtcat caagccggtg tcgcttcggt ggatgagggg catttagtgc
    12601 aaaccgaact caagcattat ttaccgctct tttccaaaag cctgctgacc agctcggtct
    12661 tctatgatta tggttgggga aaatactata aacacagcgg atttttggcg cgtggtgtaa
    12721 acaatagcgt gaaattacag agtatcggag cagggctttc gctctctgaa gcaggcagtt
    12781 atgccattaa cgccagtgtt gccaaaccgc tgggtaaaaa aatcgagaat gcagataaac
    12841 accaattctg gttctccgcc atcaaaacct tctaaggaga caaactatgt ttaaacgtaa
    12901 tgcaatttct ctctgcattt tgaccgcttg cagcggttta gcctatgcca atacagcaga
    12961 tttgccgcaa ggtgaaaggg tgcgtgtcgg gacggcaacg attgagcgca caaccgataa
    13021 aatgaccgtg aatcaatcca gcaataaagt acaaattgat tggaacagct ttgatattgg
    13081 taagaataaa gaagtggaat tcaaacagcc gacagagatg gcggtggcat ataaccgtgt
    13141 taccggcgga aacgccagtc aaattcaagg caagctgacc gcaaacggca aagtgtattt
    13201 agccaacccg aacggtgtac tcatcaccaa agatgcggaa gtgaatgtgg gcggtttgtt
    13261 agtgaccaca aaagatttag aaaaaatcag cgaaaacggc acaaaagata aattcagtcg
    13321 caaattagcg aaagaaggca aaattcttaa ccaaggtaaa attacggcca aaggcgagcg
    13381 ggcttttgtg gtattggtgg gcgacgatgt ggctaatgaa ggggaaatta acgccaaaaa
    13441 ttattaccac aaagaaacga aaaaagtcac cgaatgttat gacgattctt ggagcttggt
    13501 aaaacaatgc tacgattttg ataaagaaat cgtgaaaagt accagtggag aagtgcattt
    13561 atcctccgga gaaaatgtca cctttacttt aagcgaccgc tatattgatg tggcgttaga
    13621 cgataatacg gtcaatagca ttatcaaaaa tgacggggca atcatcgcca atggtgacat
    13681 taccctcact gccaaagggc gaaatcaagc cttagacagc ttaattatca ataacggcgt
    13741 attgcaagcc aataaggtgc aaaataaaaa cggtacgatc attttatctg ccggtgaaac
    13801 ccaattacac gaaaaaagcc aaattaaagg cgagaaagtg agctttgccg aagcttctta
    13861 ttacggtccg acagaagaca ttaaagtggt ttccaaaacc ggctcaaaag tgaccgcacc
    13921 tgtgatcgat ttcaaaggta aaaccgtgaa tattcaaggg gaatttgggc gtgaagacag
    13981 caccgatctc tataacgatg aactacaaat cctcaaaacc acggtgaata ttgaagtccc
    14041 gaatacggaa gatattcgca ttgcagatac cgacaacgga ggtagcggtt cctttataca
    14101 agcgggtgct ttagcctcat tacttgcaaa taacggacgg gttaatgtac agggcaaagg
    14161 ttttgatgtc tcaggcaagt tgaatgtgaa tgcctttaaa caaacggatt ccgtgctgaa
    14221 atttatcaat caggcgggca tcaatatcca caatgccgat attcacgcaa acgggcgttt
    14281 attctttgtg acaaacttgc cgaatgacac cgatttccaa tcgaatatcc gcattaccga
    14341 cagcaaaatc aacttaggca acggctcaat gggctttggt cgcagtagca aacgttggga
    14401 aatgcacgat gtggttcgac gtgccgatac ggaactgcgt aaaaaattca atctggatat
    14461 gaaaaacgtg gaattaaacc aagtggatga ttttgtggta gcgggcggtt tccaacaagt
    14521 taatttggat aacgtgaaag cccgtggcaa aaccaacttc tatctggatt ccggcaactc
    14581 ccgcatgttt gtcggtgagc agatttatga atatggcgta accgatattg aaaaacgcac
    14641 ccaattggcg aatttagacc agcgtagaaa acgttggaat tcggataact atgatgagac
    14701 cgatctcaac tgggaataca accaacgctt tgacggcttt gcagcaaaac acaatcaccg
    14761 cgcgccgatt gccgatacgg aaatcaatat tgccaatagt gatatcagct tagataacgg
    14821 ttttgtgcat ttaatggcag aaaaaatcaa tctggacgac agcaaaatca atatcacctt
    14881 caaccaagac aacagcttgg atgaaagtac ccaaatcaac cgcttaggac taaacggcaa
    14941 agtgtcgatg aaaaacagcc atattaacgt agtgggcgat gaaaaagacg gtatctcacc
    15001 ggctcgccat tatgccacga tgttcttagt gggggagctg cttggtgaaa agagttctat
    15061 tttcctcaaa tcccaccaag gtgcagtatt gagaaccgac agcaatgtta caattgccgg
    15121 taaaaacagc aaagacgacc tcaaaattac cgccattacc accggtaaaa aaatgggcaa
    15181 tgaaatcatc ggaccggacg gcttgccaac ctcggaagat aacgatgcca acgccagcaa
    15241 caccgccttt gccatcggct atgaacctaa cgctacggct atcgtcgaaa atgcaagcat
    15301 taccgcatta gcaccaaacg gcggcttggc atacaccggc acgtctaaaa cccaaattga
    15361 cgcgaaggat aatgctacct ttaccttctt tgaaaaacct cgagccggct atgacaaatt
    15421 gcttggcgac atcaaaggta accccgataa attaacccca cgcgatttcg cccgtttata
    15481 cgacaacatt aaaggcatca aagccagcag cctatccgaa caacagcttg gcctagcaga
    15541 caccgcgaag aaaaccagcg aacacacctt agcaaacagc ctagacgtag aaaatttggt
    15601 ttcagtgaca gtgtgtgatg agcagaataa gtgtgaggag cgtatgttag gtaacaaaaa
    15661 taccaatgct aaagttattg tcggagatat caaatttgag tagcgttgaa gaaagtggta
    15721 gaagctcaga cttgatctga taaagcacta taaaaagtga gagtttcccg tttagaatat
    15781 gagtgtcaaa attcaatcta aacaaaaagg aaactctcat gttttattac ttacaatccc
    15841 ctcattaaac acaagaccgg tttattaaat ttagcagaag aaccgggcaa tatctctcaa
    15901 gcctgcaatg tggtgggtat gagcctagat acattctatt gctatcaaca agcggttatt
    15961 tttggcaact aatttgcaaa aaaacaataa aatccgaccg cttgtagagg gttaatccgc
    16021 ccttagtgaa atttcaccga tgccgaaata gcggaggttg tcgccctgtt ttagaatgag
    16081 ttcgccctgc tcgttaatgc cttgcgaaat gccgtggatt tcttcggctt cggtaatgag
    16141 cttaaccgct ttatggcgga aaaggtcgaa actttgccag cgttcggcat aatgagcgaa
    16201 gccgacaagc ggataaattt tgagattttt ttgcaattca taggctaaac ggcaaaccaa
    16261 ttcgttgcgg ttgaaatgat attgcgataa atctgcccac gcttgcgtca caatattttc
    16321 atccactttt gccattccta ggttcagccc aatgccgata accacatcta aaccattgcg
    16381 attggcttgg gtttccaaca aaatgccccc catttttttg ccttggtaat aaatgtcatt
    16441 cggccattta atttgaatat cttttacatt ttgaacagta aggctttccg caatgatcaa
    16501 ggctaccact aaacttaagg gcggtaaatc tgccgcctgc tccatcgggt aatgccataa
    16561 aatcgagaaa tagagatttt cactctcggg cgaataccaa gttcgacctc gtctgccacg
    16621 tccggcagtt tgtttttcag cgaggcaaac cgtgccgttt tccaaacgtt ggtgatgagt
    16681 gagcaaatat tcattggttg aatcaatttc atcgaacaca acggcttgcc cgcaaattaa
    16741 agcattttgg atttgagctt ggttaagttt cattatttcc ccacttagcg agtgattttt
    16801 tcgctatcga cctcaccgtt tttaccgata aaacgcactt caggctgaat ttctacccca
    16861 aatttttctt tcactctctg gcgaacggtt ttggctagag ccaagacatc ttgccctgtt
    16921 gcattttctt tattaatcag cactaaggct tgctgggtat gtaccgccgc tccgccaatt
    16981 tgtaagtctt tcagcccggt ttggtcaatt aaccaacctg cggctaattt taccgttcca
    17041 tcagcttgag ggtagtgagg aatggctggg aatttggctt gtattggtgc aaattgttcg
    17101 tttgaaatca ccggattttt aaaaaagctg ccggcattgc caaattcgtc agggtttggc
    17161 aatttggagg agcgaaccgc acagacttca tcaaaaatct gtattggcgt aacggtttcc
    17221 ggattgagtt gggctaatga tccgtaactt agcaccggtt tccacgcttt ggctaacttt
    17281 aagcctaccg agataatcgc aaattcatca cggtattggt gtttaaacac actttcacga
    17341 tagccaaatt cgcactcgga tttggatagc ttaaagagtt ctccggaacg taaatttaac
    17401 acttccacga aatcacatac ctgttcaaat tcaaccccat aagctcctat attttgaatg
    17461 ggagcagagc tggcgacacc cggaattaac gccagatttt caatgccggc aatattgtgt
    17521 gccaacgtcc atttaaccaa ttcgtgccag ttttccccac cttgaacgtg caaatagtgg
    17581 aaatgttcgt cttcgtggtg cgtaatccct ttgagtttat ttactaacac cacaccgtca
    17641 aaatcctcta aaaacaaaac gttagagcct tgcccgagaa tcaagattgg cagttgagcg
    17701 ttaaaggctt tttgccattc gctcaatagc tgttcgactg tggtaaattc aataatttgg
    17761 gtcgcttttg caggcaaatg gaaagtgtga aaaggggtta agctatgttt catcatcaaa
    17821 ttagttagtt aagaagtgga aataacaagc ggtgatattt ttacaaaatt ttgcaattaa
    17881 gattttgggc aggcacagga tctgccccta cattcagaat taccttgccc catataccac
    17941 aatggttttg ccgtgagcag aaattaagcc ttcgtcttcc aacattttta taatgcgtcc
    18001 aacggtttca cgggaacaac cgaccatttg cccgatttct tggcgggtaa ttttgatctg
    18061 cataccttcc gggtgagtca ttgcatccgg cattttagct aagttgagca aggtttgagc
    18121 aatgcgaccg gcaacgtcta aaaaggcaag attaccgact tggcgtgaag tttgacgtaa
    18181 acggcgagcc atttgtgccg ataaatacat taaaatatcg gggtttaaat ggactagttg
    18241 tttgaatttt ttataggaaa tttccgcaat ttcacaagga cctttagtgc ggacgtaagc
    18301 ggtacgttgt tggacttttt cttcaaataa acttaattca ccgacaaact cacctgtgcc
    18361 taagttagtt aagagcatct ctttggtttc atcatctttg atgtaaaccg acactgagcc
    18421 attcacgatg tagaaaagtg attctgcatc ttcaccggcg tgaatgagtg tatatttcgc
    18481 cggataacga tggatatgac aatgggttaa aaaccactcc accgcagggt cgtgaataga
    18541 gggcggagga gttacatttt ccagaggagc tgttgaaagt gtcatatctt gcatagtatt
    18601 tcctataact cttatactag gttaaatttt tagaatttta acacgaaatt aaaggttagc
    18661 ctaaaaaaga ttttttgtct ttaatatcaa ggctttcgtg taattccgac caaacaatca
    18721 ccactttatc tgccttaagt tgtgtgagta atcgttctct tttttctgcc agagaaagtt
    18781 ccctttcccc gtagtctgtg ccttctcgta aaatgaagga atctaaaata ttatgtaagg
    18841 ttgattcttc gagttcttgc caaggtataa tcataattaa tcaaataaag gcttaataaa
    18901 tgcccactgt ttttcaaaat gttggtgttg gttatagctg aaattagaac gaaccaagcg
    18961 taaaaattgc ccttcgcaga aattcactaa ataaccggct aaggctcttt cgtcttcaaa
    19021 gctcttgcgt tcacgcagtt tactaagttg caaaatattg gcaaattgta actccaagtt
    19081 atcaaagaat tttgccactc gagctttgag caactcctct tcaaacatca aggcgtgtcc
    19141 ggtcaggatg cgggtaacgc ccgggttttt gcgagcaaat tctaaaatca catataaaat
    19201 tgctcgcacc gaattggcac tgctgtcttg gcgtttattg gcgtgaatat agctggtgag
    19261 ggtctgctcg attttctcga ttaacgcttc aaacatcttg gttttacttg ggaaatagcg
    19321 atacaacgcc ccctccgaca cccccaccgc agcggctaaa cgctcggtag tgatacgctg
    19381 cattccctct tcagaattta acaagctgat taacacttcc aacacttgtt ggcggcgttc
    19441 caccactgat tttttcggca ttttaatttt aggttctgtc attgccaatc ctattattgc
    19501 ttacctgaat gcccaaaacc gccttcgcca cggtcggtct gctcaaactc ttgcacaatg
    19561 ttaaaacttg cctgaaccac cggcacaaag actaactgag caatacggtc gcccacgttc
    19621 acggtaaaat cagcttggct acggttccaa agcgacactt tcagctcgcc ttggtaatcg
    19681 ctatcgatca agccgactaa gttgcctagc acgatcccgt ttttatgccc taaacctgat
    19741 cttggtaaga tcaccgctgc caaattcgga tcggcgatat aaattgaaat ccccgttggg
    19801 atcaacaccg tttcacccgc ttttaccgtc agcggctcgt tgagcatcgc ccgtagatcc
    19861 aagcctgccg agccttcggt cgcatacgca ggtaatggaa attcattgcc gatacggcta
    19921 tctaaaattt ttaaatcaat ttgtttcatt ctttttcctt tttgtaaatt tttaaaacta
    19981 tattattcag ttataaaagg ttttaattgt atcgttccaa gtggaagttc agtcaatatt
    20041 tcccagcttg tgttgtggta aaatcgaaat aaacttgcaa cgttttcaac gtagcttgaa
    20101 ttaaatttac cttctaatgg ctttattcct ccagtaaaat gaattatatg tggaatataa
    20161 tttggcgaaa ttttttgctg ggcaatatca tctaataaat gttctgtctg ataattatat
    20221 tttcgatcta actcaatcca attatattga aagcagtaat taagaatatc ttgatcccca
    20281 aatggtaaat tttctttaaa tctctcagta agctgtataa atggttgctt actaaaatgc
    20341 tttgcattta gataaaatac accagcattg aaatagtttt tgtaaatata gggatgattt
    20401 tttagtttgt ttacataagg atcagcaatt gcagcaatac ttccaaaaga aaaatctagg
    20461 tttgtaaatg gatccgtaat atttccatta accacaagat cgcaatctaa ataaatccaa
    20521 tatgggctat cgctgtgttc aaatagttct tcaatataat atcgtaggta agttgaatta
    20581 gtaatatagc cgttggagtt aaaatttgct aaattatttg aatctaaata gccaagtctt
    20641 aatgtggaat atctattttc taaatagggg cgtaatgttt ctatccagtg gtgagaaata
    20701 tcgccagtac tcaatataaa aatagataaa tgattatgat gagctaatag tgattttaag
    20761 gcaatctcta aatatggcag gtagttttta tctgctgaaa atacaatatt atactttttc
    20821 attttgatct ttgaccatat ttttctcttc ttgcacaatt cgttcaccga ttttccaata
    20881 ggcttcgacc attgccgaat tcacggcttg atacgccttt tggcgagcag ataaaagaat
    20941 atgtttaatg tcgttgatat actgatttga cgtaagttgc ataattttca tcctattacc
    21001 cttaagattt cacaaggtag ccagccaatt tcgttttctc ttttgacaat tgcccattgg
    21061 taatgtagtt caaggaattc tactctctcg ccttgtgctg caacaagttc cgttgggtta
    21121 taatcgcata tcaatttatc ttcgctaata aaatggcttg gcacaaaggt tttccaaccg
    21181 tcaatttcac aggcaaacca gtttgggtag tttacacatt cactccctaa tcgaacggca
    21241 gtaccagctg agaatgtagg aaatttccct tcgccttgat gaaaatggct aaccagtaat
    21301 ttcattattt ttctcgataa tgttttacaa tttcctgtac caaactttct gccaatttgc
    21361 ttttatccgc cagaggaagc gttttttcac catttttcca gaacaaatgc aacgcatttt
    21421 gatcctgccc gaacacttgt ccgcctgaga catcattggc acaaatcata tccagatttt
    21481 tgcgttcgag tttcgattta gcgtactccg ccacattttg cgtttctgcg gcaaaaccaa
    21541 ccacaaaagg gcggttttcg gcaagattgg cgacgttagc gataatatcg gggtttttta
    21601 ccaattttag cgtgagttca tcattggcat cggttttctt aattttttgg tcagagactg
    21661 ccgccattcg gtaatcggca accgctgcac agccaataaa aatcgcagat ttttgggcaa
    21721 atttgaccgc ttgttgctcc atctcaaccg cagattccac attaattcgt tccacatttt
    21781 tcggcgttgg taaattcacc ggaccgctaa tcaacgtaac ctttgctcca cgttcggcaa
    21841 aggcattagc aatcgcgtag cccattttgc cggagctgtg gttgctgata taacgcacag
    21901 ggtcaatcgc ctcacgagtc ggtccggcgg taatggttac atttaagccc tctaaatctt
    21961 gattgttgga gaaatgagcc aacaccgctt ggtaaatttc ttcaggctca gacattctgc
    22021 cagcccccac atcaccacag gcttggaagc cactattcgg gccgatgagc tgaacgccac
    22081 gattgactaa aacagacaga ttttcttgca ccgcaatctg tttgtacatt tgttgattca
    22141 ttgccggtgc aagcaaaatc gggcttgcag tcgcaaggca gagagtggaa agtaaatcgt
    22201 tgcccattcc catacgcagg cgagcaataa aatcggcact tgccggggcg ataacgatta
    22261 aatccgccca ttttgccagc tcaatatgcc ccatcgccag ttcggcttgt gggtcgagta
    22321 gtgaagtgga aaccgcattg ccggaaatcg cttgtaaggt caaaggcgtt acaaaggctt
    22381 ctgctgctgg ggttagcact acacgcactt ccgcatttgc cttttttaag tggcggataa
    22441 attcaatggt tttgtaggct gcaatcccac cggaaatgcc gactaaaatt tttttgtttt
    22501 gtaacatctt tactatcctt aaagcgtgga tttattttgc atattttagc ggaataagga
    22561 gttgctcaca acttcactat ttttgcgatc ttgctcgaaa aattgaataa atccctttgt
    22621 ctgcaaaggt tggctctttt atgcttaact aaattgatgg aggaaaaaat gaacgatttt
    22681 tttgatgaag attctcaaga gccaacaatg atgccgcgtg agaaattatt aacacagggg
    22741 gcagcctcat taaccgattc cgaattatta gcgatatttt tacggactgg tacgaaagct
    22801 gtgcctgtgc tggcattggc agagagtgtg ttgatggcat ttggctcgtt acgccaatta
    22861 ctgaatgcaa atattgatga tttttgcaaa atttacggtt taggcaaaac caaatacatt
    22921 cagttacaag cctctaaaga gatgaccaaa cgctatctgg ctcaacaaat ggaatttagc
    22981 gagatgattc aagcccctta tatggcgatt atgtatttcc aaaccgagtt ggaggaagaa
    23041 gaacgggaag tttttatggt gctgtttttg gacaaccaaa accgattgat ttataaagaa
    23101 aaaatgttct tcggcaccat taatcaaact gctgttcacc cccgagaaat tattaaaaga
    23161 gcgttaaaat ataatgccgc ggcgattatt gtggctcata atcacccctc aggttcttgt
    23221 ctgccgagtg agtcggacag aagtttaact aaaaagatcg aaatggcgtg cgaattggtt
    23281 gatattcgct ttgtggatca tattattgtc ggcaaagggg actatttttc gttcgaggaa
    23341 gagaaattag agatgaagga gcattcattt ttgcaaattt ctgatagaaa atgaccgctt
    23401 gctttatgta acctttaaca tttctcctga aacagtaaaa gatacgcata taaattctac
    23461 ttgaatataa caaatgaaat cggtataatc ggcagtcttt attacataga ctgtggtcgg
    23521 gttaatgcct gacgaggcaa tcaaaatcgg aggggttggt tgagcaacgc cttttgtgag
    23581 atcgcccgaa ccatttttaa gcttaaaatt attggagaaa ttcaaatgtc aagagtttgc
    23641 caagtaaccg gcaagcgtcc agcagttggt aacaaccgct cacacgcaat gaatgcgact
    23701 aaacgtcgtt tcttaccaaa ccttcacact caccgtttct gggttgagag cgaaaaccgt
    23761 ttcgtaacct tacgtttaac tgcgaaaggt atgcgtatta ttgataaaaa aggcattgat
    23821 gcagtattag ctgaaatccg tgctcgtggc gaaaaaatct aaggagctaa aaaatggcag
    23881 ctaaaggcgc tcgtgagaaa atccgtttag tttctacagc agaaactggt cacttctaca
    23941 caacagataa aaacaaacgt aatatgcctg aaaaaatgga aatcaaaaaa tttgatccag
    24001 ttgtgcgtaa acacgttatc tacaaagaag caaaaattaa ataattttgt tttaagattt
    24061 aaaacccagc gaatgctggg tttttcatat acaaaaaatt agtgaaaaaa gaccgcttgt
    24121 atgattaaac taatgatagc ttaaaatcat tacttgacaa ggcttggcta tattcaatag
    24181 gtagtccttt atctgtgata atttgtgtaa agttatcgag ttgagttgca cgaaataaag
    24241 agtattttcc atatttgctg ctatcggcaa ccagtacttt ttgtttggcg ttttgttgga
    24301 gcattctttt taaattagct ttctcttctg taggtgctgt aactcctttt tctaagctcc
    24361 aagaattaca gctcacaaaa gcaatatcag gattaatatt ttctaataaa gttaaactat
    24421 ga
//
LOCUS       DANLXD010000027        24290 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.027, whole genome shotgun sequence.
ACCESSION   DANLXD010000027 DANLXD010000000
VERSION     DANLXD010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 24290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24290
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.027"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(31..219)
                     /locus_tag="PXD18_000889"
     CDS             complement(31..219)
                     /locus_tag="PXD18_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301338.1"
                     /translation="MKELFKQWLINQDSPFINSCGVECILSKVDDWLNIINANEEETE
                     TLIEWRNAFLQDVSVFIA"
     gene            623..1279
                     /locus_tag="PXD18_000890"
     CDS             623..1279
                     /locus_tag="PXD18_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antA/AntB antirepressor family protein"
                     /protein_id="HDL6301339.1"
                     /translation="MTNSLITVFDGTIQNTQIQLCNARELHSFVESKQQYSHWISDRI
                     TDYGFVQDEDYIIVTERTAGRPRKEYHITLDMGKELAMVERNEKGRQIRKYFIECERK
                     MKELLQNNQQNLPLALPEKKYTFEFTEDELQSLVWAWFAFVRGIHTFRYIYPMFQKLG
                     SNIAPEIYGQGFEYSHTAQSAHKILERITKEFDYDPMTNWRVLKHVRGFDPAFKKPTF
                     "
     gene            1513..2418
                     /locus_tag="PXD18_000891"
     CDS             1513..2418
                     /locus_tag="PXD18_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDL6301340.1"
                     /translation="MQFQEHNNRKKADKFAEYITGEALRRYVAEKVKQYARNNVSVFD
                     GAAGSGQLEQFVRPTSFTAVEVQSESCDVLRHNFPTAQIYNQSFFLYPNGEPCDCVIM
                     NPPFSLKFKDLSQAEQAQIQSEFPWKKSGVVDDIFVLKGLANSHQWGFFILFPGVGYR
                     QTEKRFREEVGNQLVELNRIQNAFEDTPIEVLFLVVDKTKTTDDCSRELIDCAGGQIQ
                     QICADKWKIRPDHWESIQPPPPPQEEIKPLELEAFAREQAIERIVGEVRLSKLIAEFF
                     EPELRRTFNAFIDDICVAVQAEKIV"
     gene            2415..3734
                     /locus_tag="PXD18_000892"
     CDS             2415..3734
                     /locus_tag="PXD18_000892"
                     /inference="COORDINATES: protein motif:HMM:NF024795.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hint domain-containing protein"
                     /protein_id="HDL6301341.1"
                     /translation="MNNIIKFTYGSICSGIEAASVAWHDIGTPLWFSEIEPFPCAVLA
                     HRFPDVPNLGDMTALPEKILNRKIPAPDVLVGGTPCFTAGHMVLTDKGYMPIETLSVG
                     DLVVTHKGQLKPILRVGSEIKPVGKLTAVGLPESIVCTPEHPFYAQKWQTINTKRNGK
                     YHRKTIISKPEWIEAHKLEGYQWVSLTDFSVMPYGGFHSKLTDDEVLLIAGYYLGDGW
                     IRRWKGKNKKAVVISVNKEKYRKFSLSFAKLPHHITTENNSVIKITICDTELADFLYS
                     QFGEKAGGKTIPAWCLSHSFRSKIFEGYMITDGSFRNGVYTANSISKSLAYGIAALSQ
                     TLGYISSVSKVTVAPTKEIQGRIVNQNDYYQMRAFLQSTSRKSRLDENRLLRSVQSFE
                     ITGNEVVYNIEVADDNSYILNNAVVHNCQSDKGGTVKASGGGFEWRE"
     gene            3655..4251
                     /locus_tag="PXD18_000893"
     CDS             3655..4251
                     /locus_tag="PXD18_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017807451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HDL6301342.1"
                     /translation="MPLSITANPTKAVQLKHQGEALSGGSETLVVHGTQDPIISQNKA
                     HCLGRNNGQENVLFEVKGAEAVRISEIQDKTPTLKARMGTGGNNIPCIALAGNTIGRQ
                     PQNDGNGNVFDESGVSYMLTRTDVHAVSAGTTIRKLTPTECERLQGFPDGWTKITYRG
                     KSAEECPDSPRYKAIGNSMCTNVMKWIGERLSAYLTSQ"
     gene            4229..4735
                     /locus_tag="PXD18_000894"
     CDS             4229..4735
                     /locus_tag="PXD18_000894"
                     /inference="COORDINATES: protein motif:HMM:NF024784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HDL6301343.1"
                     /translation="MRILPRNENYAATENGEIFSFLSNKILKPRPLKNGYLRVQLVDE
                     NGVKDYLIHRLVCETFHGYPDLHVNHKDRDKTNNRPENLEWCTRSENMLHCSRLGGFS
                     KQSERMKKMNIESCSVPVAAITLDGKLFKKYTSMTSAGKDGFSHSKISLCIQGKRKTH
                     KGYIWQKL"
     gene            4825..5100
                     /locus_tag="PXD18_000895"
     CDS             4825..5100
                     /locus_tag="PXD18_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HDL6301344.1"
                     /translation="MEQPTEFLTKDELADLTGYRQKKRQIEWLRERHYIIQDENKYKP
                     LVLYKDVYGHPRQQYPEAQSTGKWKSPAYLMGVKNGKTTQTTESLLT"
     gene            5060..6115
                     /locus_tag="PXD18_000896"
     CDS             5060..6115
                     /locus_tag="PXD18_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6301345.1"
                     /translation="MGRPRKQQNRYLPENLRPKTVTRKSGKTVIYWLYRTHGKTEISL
                     GTNRNEAFIKAAQLNIERESQTARITFGLVAKRYRDEVIPQKKASTAQTDLCKIKNLL
                     LFFNDAPLEEITPQHIREYMIWRKDTPGSANNEFSMFSHIWQYAREWGYTNLPSPNIG
                     MKRYPIRKREIYVENNIFQMVYEVADQDMRDLMDLAYITGQRPVDLVNIRKEHIFDGY
                     LHIVQQKTQAKLRIEIVGKLADIIQDRLEKATGTHLFSTKKGEKLTARKLGKRFTYIR
                     EQAVKNNPEYANEIMAFQFRDLRAKSGTDKALSLGEEAARQQLGHTSVQMTKTYIRKA
                     PIVTPIKESVPSSKHQS"
     gene            complement(6367..6678)
                     /locus_tag="PXD18_000897"
     CDS             complement(6367..6678)
                     /locus_tag="PXD18_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL6301346.1"
                     /translation="MSETEKQAINAPNAVMNGYLTMHYPDWFKPDGIYFNDGAFESFE
                     SSHKLTKDGKIRLVPTAGHTLGHLAVVVDMGEHYILIGGDASYSEQDMLAGNIDGVCN
                     A"
     gene            complement(6685..7077)
                     /locus_tag="PXD18_000898"
     CDS             complement(6685..7077)
                     /locus_tag="PXD18_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL6301347.1"
                     /translation="MIKVHCLTTGWVQIKIHHQVARFFARPARVLDVLTDKKWSPKLP
                     IGCWLIEHDDGLILVDTGESSRANDKGYQPWWHPFMQFCERRGVKKHEEVGEILKANG
                     FDPLRIDTVVMTHMHGDHAGGLPNFPNS"
     gene            7209..7769
                     /locus_tag="PXD18_000899"
     CDS             7209..7769
                     /locus_tag="PXD18_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HDL6301348.1"
                     /translation="MNDLRVIKTHLAIQNALIELLDEKLFEKVQVQEIIEKALINRTT
                     FYRYYSGESDLVGKLIKEVKAEYQDLLKKRFESGNLLRFMQTIGNRLLEKRRLILALW
                     QIKTPRHHLYDDMHMLLKNAFIAHAKRITSDDKNWAEKNWDYQAHIFATIALESHKYY
                     FEQGKLLPIPQVFEEWIEMVQVLKSV"
     gene            complement(7835..8824)
                     /locus_tag="PXD18_000900"
     CDS             complement(7835..8824)
                     /locus_tag="PXD18_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HDL6301349.1"
                     /translation="MSKQIQFTKTGSPDVLQIVDVAIPAPKAHEVQIQIQAIGLNRAE
                     MMYREGAYVIDPVFPATLGYEGAGVIVAIGEGVNEVAISDKVSIIPSFMFTEYGTYGE
                     IVNMPKHAVVKHPDNLSMEQASASWMAFVTAYGGLIEFGKVQKGDFVVLGGATSSVGL
                     ASIQIAKMQGATVIALSRTHAKGDVLLEKGADFVIATSEDDVTAKLFEITNGKGVNVV
                     FDPVGRKEAAKIINAMAQDGRYIIYGALSHDDIAVPVFPILGKHLTVRGYELFEITTV
                     PEKLAQAKTFVYDGLASGQLRPEIDKIFAFDEMVKAHEYMASNQQIGKIVVKV"
     gene            complement(9038..9955)
                     /locus_tag="PXD18_000901"
     CDS             complement(9038..9955)
                     /locus_tag="PXD18_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6301350.1"
                     /translation="MTFIIGILAGVLIAFQSAINARLRMHVGAAFLTSFVSFSVGLLF
                     LLGLSLIMQQTPAFSLDNLGNVPLWAWTGGLLGMVGLTANVLIFPKLGGVQTAVMPIL
                     GQVLMGVLIDTFAWLNSPYIAFTASRLFGIGLVLFGVWIAVVLPHLSGLKRKENANLW
                     LWRAVGILGGTALATQAAVNGEFGRQPGSSLGAATVSFGVGAIGLLLVVLFYEKSLPK
                     LCQPTEGKPFWIWSGGILGSLFILAGVWLVPQIGTGSVVMLVLSGLICGSLLVDKFGL
                     FGITQKPILPLQIIGVTLLLAGVAFIRLL"
     gene            complement(10091..10750)
                     /locus_tag="PXD18_000902"
     CDS             complement(10091..10750)
                     /locus_tag="PXD18_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003672168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL6301351.1"
                     /translation="MQFFNKEDVINAFHYRASTRSYDGSRKIPAEDFNYILELGRLSP
                     SSVGSEPWQFLVLQNPELRQKIKPYCWGIPTMETSSHIVVILAKKNARYDSQYFSEIM
                     DRRGLQGEAREKAMAVYKKFQEKDIGILDSERSLFDWASKQTYIALGNMMTGAALIGV
                     DSCPIEGFAYQEVNDILAAEGLFDPSEWGVSVMCTFGYRDKEIRQKARKDFETVVKFI
                     E"
     gene            complement(10935..11999)
                     /locus_tag="PXD18_000903"
     CDS             complement(10935..11999)
                     /locus_tag="PXD18_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="HDL6301352.1"
                     /translation="MAKFRKLFTPFNIKNLALKNRVVMPPMCQYSATNGVPNDWHFVH
                     YTSRAVGGVGLIIVEMTNVAPNGRITPNCLGLWNDEQQQAFKKLVDSVHAQGAKIGVQ
                     IAHAGRKAQDEPDAVAPSAIHYGELDYAGQNLITPRELTTDEVKALVQAFKDSVKRAV
                     EAGFDTIEIHGAHGYLIHQFYSPKSNQRSDEYGQDKMLFGEQVIQAAREVMPSEMPLI
                     VRISAQEYGENGFGLDYGLQVAKRFADAGADVLDISGGGDGVLHAGNHPEFYAGYQVD
                     FARQVKLATGKPVIAVGMLDNPAVGDHILGMGDADLVAVGRALLRDPYWVLNAQYDQN
                     AADSSEMQFVPKQYERGLFM"
     gene            12090..12998
                     /locus_tag="PXD18_000904"
     CDS             12090..12998
                     /locus_tag="PXD18_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6301353.1"
                     /translation="MSDIRTLDFNLLKAFVVLLDECNVSRAAQRLSITQPAMSGILNR
                     LRESFNDPLFVRVQHGMQPTDRALQLGQTARNILQDISSMLQPPILEPEHLNMTLRIA
                     AMDYVQQIIALPLILRLRRLAPNVKVALLPVQGQNIKTLFEQKKIDLALVSRQHLSTD
                     TLKTVLYEERYVCAMSKTHPMAQTPLSLDQFCNLPFAMLSYNGGEFSGATDLALQKIG
                     LQRKVMVSVNHISLLPQLLQGSDLVAVLPERLAKTLPNVYLQPPPIEVEGFTMMMAWH
                     ERTEQDTAHRWLREVLQGVVKPKQAL"
     gene            complement(13068..13619)
                     /locus_tag="PXD18_000905"
     CDS             complement(13068..13619)
                     /locus_tag="PXD18_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL6301354.1"
                     /translation="MAKQIAVLIGSGSKTSFSHLTVRHLQKMAPASIQLNIVDIADLP
                     LYDRDLDENSPAQYTRVREAVAVADGVLLVTPEHNASFSAMLKNAIDVVSRPMGQSKW
                     IGKPAGIVTVGASPAGGVRAADQVRTITSGSFVNMPTLPFALNVGNLFTGVFDEQGEI
                     ASETLKSSMQNFINAYAQFVEKY"
     gene            13811..15172
                     /locus_tag="PXD18_000906"
     CDS             13811..15172
                     /locus_tag="PXD18_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HDL6301355.1"
                     /translation="MLFLNKIKQLFIFAFTLVLSACSLVVYKPVETIKQVNVERGYRQ
                     KNVIAESAKDGNIVVIMFSGGGTRAAALGYGVLEEFKKVRVKETNKGNTLLENIDIAF
                     GVSGGSILATYFALEGKDIIPKFADRFLKANFQKDIITEVFSLSNLPRLSSPQYGRGD
                     LLQERLNFALYHGKKFGDLVKNRKGPFAVISATDMNIGQKLTFTQETFDGLCLNLNDL
                     EISRAVAASSSVPLIFAPLTLNNNGGNCHFSMPQEFSAREKAIDGLITKNIEETNHIL
                     SLYQDSKERPFIHLVDGGLTDNLGLASVLEISDVMGIEEMYQYIHQLRVKNIVVINVN
                     AQNEVSSEIDKTANVPGVADVVNTIVNVPIDRTTQINLQRYRQFTDGWNEYANKQPSK
                     IEMHFVSLGLKELPDGDLKKDVLNIATSFYLPEEDVDKLREAARVLLQQSQEYNAALK
                     TLQ"
     gene            complement(15220..15717)
                     /gene="rraA"
                     /locus_tag="PXD18_000907"
     CDS             complement(15220..15717)
                     /gene="rraA"
                     /locus_tag="PXD18_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E activity regulator RraA"
                     /protein_id="HDL6301356.1"
                     /translation="MRIDTSALCDLYSDQVDVVEPIFSSFGGASSFFGKITTVKCFES
                     NGLIAEVLEEEGEGRVLLVDGGGAVRRALIDAELAQLAVDNGWEGIIVYGAVRQLDIL
                     ERLDIGIHALAPIPVGADNTDIGEVDTPVNFGGVTFFPEDYVYADLTGIILSQELLDL
                     NDISE"
     gene            complement(15815..16717)
                     /locus_tag="PXD18_000908"
     CDS             complement(15815..16717)
                     /locus_tag="PXD18_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HDL6301357.1"
                     /translation="MTEKVTETAPNIDVVAETEKVIHKVSNMNIETMLNEWIIPYGTK
                     ILLAIAIFVVGKFLARLISRLLGKAALKSTKDEMLQSFIVSISYFLLLLIVVIASLSQ
                     IGINTSSLVALIGAAGLAIGLSLQNSLQNFAAGVMLLIFKPFRKGDLIETGGMTGVVE
                     QMGLLVLELRTGDNKTVLLPNGKVFSDSIINYSNNPTRRIDFTFDISYESNLKEAKEI
                     IQRILDANTYVLKDPAPVVAVGALAPHSVQLVVRPWVQTPNYWAAYWEIIEQVKLAFG
                     EAGISIPYNQMELHIKSGSLENKA"
     gene            16826..17788
                     /gene="rluC"
                     /locus_tag="PXD18_000909"
     CDS             16826..17788
                     /gene="rluC"
                     /locus_tag="PXD18_000909"
                     /EC_number="5.4.99.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(955/2504/2580) synthase
                     RluC"
                     /protein_id="HDL6301358.1"
                     /translation="MTTEKVISAGVQFFTISEDEAGQRLDNFLLAKLKGVPKSLIYRI
                     VRKGEVRVNKGRNKPEYKLQPDDLVRVPPVRVAEKNEAPISTKLNKVAELESQILYED
                     ESMLVINKPSGIAVHGGSGLSFGVIEALRALRPQARFLELVHRIDRDTSGILLVAKKR
                     SALRSLHEQLREKVVQKDYLALVRGQWQAHTKVIKAPLLKNELASGERIVRVSEEGKP
                     SETRFSIEERYANATLVKASPITGRTHQIRVHTQYAGHPIALDDKYGDAEFDSKMKEV
                     GLQRLFLHAHAIRFEHPKTGEEMVITAPLDKTLKGVLAKLRANY"
     gene            17897..18754
                     /gene="folP"
                     /locus_tag="PXD18_000910"
     CDS             17897..18754
                     /gene="folP"
                     /locus_tag="PXD18_000910"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HDL6301359.1"
                     /translation="MQIHFKNFQKNDRLLDLTTPQIMGILNFTPDSFSDSGKFFSLDK
                     ALFQAEKMLADGASIIDIGGESTRPNAAIVSLEQELERVVPVVEAIRSRFDCLISVDS
                     SKAEVFKESAKVGMDIINDIRALTEPNALAAAVELGLPVCLMHMQGNPQTMQQNPHYD
                     DVLEDVADFLNQRIFECITAGIPKEHIILDPGFGFGKSVKHNYQLLKHLKAFVDSGFP
                     VLAGLSRKSMIGAVLDKPVEQRLLGSVVGALLAAQNGAKILRVHDVAETADALKIWQA
                     MLESDNEEK"
     gene            18754..19101
                     /locus_tag="PXD18_000911"
     CDS             18754..19101
                     /locus_tag="PXD18_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family reductase"
                     /protein_id="HDL6301360.1"
                     /translation="MTTLVYGIKNCDTVKKALKWLEDHNQNPQLHDYRVDGLNADWLV
                     EMEAKFGWENLVNKRSTTWRNLDEEIKNNLNRESALKVLTEQPTLIKRPIVIKEDIAL
                     IGFNEKEYVAAFN"
     gene            19231..20379
                     /gene="dapE"
                     /locus_tag="PXD18_000912"
     CDS             19231..20379
                     /gene="dapE"
                     /locus_tag="PXD18_000912"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HDL6301361.1"
                     /translation="MKNEIISLAQNLIRRDSISPQDKGCQQEIAQRLEKLGFNIEWLP
                     FGDTLNLWATHGSENGKTEPCIVFAGHTDVVPVGDESQWAYPPFSAEIVDGMLYGRGA
                     ADMKGSLSALVVAAETFVQHHPNHKGKVALLITSDEEAAAKDGTVKVVETLMARNEAV
                     HYAVVGEPSSSKVFGDVIKNGRRGSITADLYIEGIQGHVAYPHLAENPVHTSLGFLTE
                     LTTYQWDNGNEFFPPTSLQIANIKAGTGSNNVIPGELYVQFNLRYCTEVTDEIIKAKV
                     AEMLEKHGLKYRISWNLSGKPFLAGNGKLVEAALQAVENVTKITPRLDTGGGTSDGRF
                     IALMGAEVVEFGPLNATIHKVNECVSADDLAHCGEIYYQILEKLLATA"
     gene            20490..21824
                     /locus_tag="PXD18_000913"
     CDS             20490..21824
                     /locus_tag="PXD18_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HDL6301362.1"
                     /translation="MQLYSYICLLFGLAMFISFFTRKLNENIQTTIAITASALVGSLL
                     ILTFGSLGWFNVDKLAISIFEQLDFKSFLLNGMLGFLLFAGSLGIKLPLMKEQRREIA
                     VYALFSTLVSTFLIGALIYGVARLLGLELGFVYCLLFGSLISPTDPIAVLAIIKSLKA
                     PKRLSMHVEGESLFNDGIGLVIFTTIFAVAFGGQEPNLSGITGLFLQEAVGGIVFGLL
                     TGFVAHKFISATDDGSLEILITLTIPTVGFVIANYLHVSGALTMVVAGIMIGNWTRRS
                     GFSEQSQKYLDHFWEMIDHSLNYLLFLLIGLSTLLVDFTFIGGVLMLAAIPICLLARY
                     ISLWIPYQVLKRFRTYNPYTLKIMTWGGLRGGLALAMALSVPAGAAVVSSSEGNLDVR
                     DLILLMTYAVVTFSILVQGSTVEPMIKKSKLVDPRKVALNKLGAPDDVIPHI"
     gene            21931..22440
                     /locus_tag="PXD18_000914"
     CDS             21931..22440
                     /locus_tag="PXD18_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HDL6301363.1"
                     /translation="MLFTGLLCGFLLGFVMQRGRFCITGAFRDLYVTKNSRMFVALLI
                     AITVQSIGIWLLYEAGSFSSPAEDLPLLAVIIGAFLFGIGIIYAGGCATGTWYRAGEG
                     LIGSWVALVIYGLFSASMRTGVLAPLNQELKSNVIQHRTIYETFGISPWVLVFILSVI
                     TLALSAHSI"
     gene            22469..22690
                     /locus_tag="PXD18_000915"
     CDS             22469..22690
                     /locus_tag="PXD18_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HDL6301364.1"
                     /translation="MNVRLPASGLVCPFPLVEAKAAMAKLNKGDSLTIEFDCTQATEA
                     IPNWAEEEGYEVTDYQQLGDALWEITVVK"
     gene            complement(22755..24263)
                     /locus_tag="PXD18_000916"
     CDS             complement(22755..24263)
                     /locus_tag="PXD18_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDL6301365.1"
                     /translation="MSKCPVTHLTMNNGAPVVDNQNSLTAGPRGPLLAQDLWLNEKLA
                     NFVREVIPERRMHAKGSGAFGTFTVTNDITKYTRAAIFSQVGKKTEMFARFTTVAGER
                     GAADAERDIRGFALKFYTEEGNWDMVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNMRS
                     ATNNWDFWTLLPEAFHQVTIVMSERGIPASYRHMHGYGSHTYSFINAANERFWVKFHF
                     HTQQGIKNLTNEEAAAIIANDRESHQRDLYEAIERGDFPKWKMFVQIMPETDADKVPY
                     HPFDLTKVWPKSDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGISVSPDRMLQ
                     ARLFNYADAQRYRLGVNHHQIPVNAPRCPVHSNARDGQGRVDGNYGSTIHYEPNSFGK
                     WQEQAQYAEPPLKINGDAAHWNYREDDADYFSQPRVLFNMMNDEQKQALFNNTAAGMG
                     DALDFIKYRHIRNCYACDPAYGEGVAKALGMTVEDAIAARATDPALGQPGLL"
BASE COUNT         7147 a         5072 c         5255 g         6816 t
ORIGIN      
        1 atttgggtta aagaagacga tttatagtac ctaagctata aaaaccgaaa catcttgcag
       61 aaaagcattc cgccactcta taagagtttc ggtttcttct tcgttggcgt tgattatgtt
      121 tagccagtca tcaacttttg acaaaataca ctcaacgcca cagctattaa tgaatggcga
      181 gtcctgattg attagccatt gtttgaaaag ctctttcata gtgttcccct tatgtttttt
      241 atgagattac tacgaaagcg ttttactgtc agaacgaaaa tttatttttt cgatgcagat
      301 cgcaaaaata gatattgagg tttgacaacc gcccccaatt cggattaaga taaccgcact
      361 ttcaacagaa agtcgggatt ggcctcctga attgttagcg gtgcggagag atgatagacg
      421 caccatgcgt ctttttttat atccgaaatt agcaaatcaa ccttttagat aaatttatct
      481 aaaagtccca atgatgagct agataggagt tccgaaagga acgcagttac cgctaactgt
      541 aaggccaatc ctgtctagtt catcaccaac gattggcctc tgcggtgatg agtgttaaaa
      601 cttattagcg gagaatgtca aaatgacaaa ttcacttatt accgtttttg acggtacaat
      661 ccaaaacact caaattcaac tttgcaatgc tcgtgagctt cattcattcg ttgaaagcaa
      721 acagcagtat tcacactgga tttcagaccg catcaccgac tacggtttcg tgcaagacga
      781 agactacatc atcgtcaccg aacgcaccgc tggcagacca cgcaaggaat accatatcac
      841 ccttgatatg ggcaaagaac tcgcaatggt ggaacgcaac gaaaaaggca gacaaatccg
      901 aaaatacttc atcgaatgcg aacgcaagat gaaagagctt ttgcaaaata atcagcaaaa
      961 cctaccgctt gcactgcctg aaaagaaata cacctttgaa tttaccgaag atgaactcca
     1021 aagcctcgta tgggcttggt tcgctttcgt gcgaggtatt cacactttcc gctatatcta
     1081 cccaatgttt caaaagctcg gttcaaatat cgcacctgaa atctacggac agggttttga
     1141 atatagccac accgcacaat cggctcataa aattcttgaa cggattacca aagaatttga
     1201 ttacgacccg atgacaaact ggcgagtact caaacacgtt cgaggtttcg acccggcatt
     1261 taaaaagcca acgttctaat cacaaaaaat tataaaaccc gaccgcttgc gaaacatcaa
     1321 gcggcggttt cctgcaccca aattttgagg attagacgat gaaatacgca aaaatcatac
     1381 tctttttaac cgcctttgca gttgctgctg accatctaga gttacgcaac gactgcgatg
     1441 gcaaaatttg tacagctcaa cgctaattaa cccaaccgct tgttccgcaa gcggttattt
     1501 tttggaggaa aaatgcaatt ccaagaacac aataaccgca aaaaagccga caaattcgct
     1561 gaatacatca caggtgaagc tctacgccgt tatgttgctg aaaaggtcaa gcagtatgcc
     1621 agaaataatg tttctgtttt tgacggggcg gcaggttctg ggcagttgga gcaatttgtc
     1681 cgcccaacct cttttactgc ggtagaggtc caatccgaaa gctgcgatgt gttacggcac
     1741 aatttcccta cggctcaaat ctataatcag agcttctttc tctatcctaa cggcgaaccg
     1801 tgcgattgcg tgattatgaa tccgccattt tcccttaaat ttaaggattt aagccaagcc
     1861 gaacaagcac aaattcaatc cgaatttccg tggaaaaaat ctggggtggt tgatgatatt
     1921 ttcgtcctaa aaggactggc aaatagtcac caatggggat ttttcattct ctttcccggc
     1981 gttggctacc gccaaacaga aaaacgcttt cgagaagaag ttggcaatca acttgtagaa
     2041 ctcaaccgca tccaaaacgc ctttgaggat accccgattg aagtcctatt cttggtggta
     2101 gacaaaacca aaacgaccga tgattgctct cgggagttaa tcgattgtgc tggtgggcaa
     2161 attcaacaaa tttgtgctga taaatggaaa attagacctg atcattggga aagtatccaa
     2221 ccgccaccac cgccacaaga agagataaaa ccgcttgaat tagaggcgtt tgcccgagag
     2281 caagcgattg aacgaattgt cggcgaggtt cgcttatcca agctgatcgc agaatttttt
     2341 gaaccagaat tacgccgcac ttttaacgca tttattgatg atatttgcgt tgcggtgcag
     2401 gcggagaaga ttgtatgaac aacataataa aattcaccta tggatctatc tgctccggca
     2461 ttgaggcagc aagtgtagcg tggcacgaca tcggtacgcc gttatggttc agcgagattg
     2521 agccgtttcc gtgtgcagtg cttgctcacc gtttccccga tgtgccgaac ttgggcgata
     2581 tgaccgccct acctgaaaaa atcctcaatc gtaaaattcc tgctcctgat gtgttggttg
     2641 ggggtacgcc ttgctttacc gctgggcata tggttttaac ggataaagga tatatgccaa
     2701 tcgaaacact ttctgtcgga gatttagttg ttactcataa aggacaacta aaacctattt
     2761 tgcgtgttgg cagtgaaata aaaccagttg gaaaattaac ggctgttggc ttacctgaat
     2821 caatcgtttg cacccctgaa catccttttt atgctcaaaa atggcaaacg ataaacacca
     2881 aaaggaatgg aaaataccat aggaaaacta tcatttccaa acctgagtgg attgaggctc
     2941 ataagctaga gggctatcaa tgggtatcat taactgattt ttcagttatg ccctatggtg
     3001 gttttcatag caaactgact gatgacgaag tccttctaat tgccggttat tatcttggtg
     3061 atggctggat aagaagatgg aaaggcaaaa ataaaaaagc tgttgttatt tctgtaaata
     3121 aagagaaata tcggaagttt tctctttctt ttgccaaact tcctcatcat attactaccg
     3181 aaaataattc ggtaattaaa atcactattt gtgacactga acttgctgat tttctttatt
     3241 cgcaatttgg tgagaaagcc ggcggaaaaa ctataccggc ttggtgttta tctcattctt
     3301 tcagaagtaa aatttttgaa gggtatatga ttaccgatgg ctcttttaga aacggagttt
     3361 ataccgcaaa tagcatttcg aaatcccttg cttacggcat tgctgcatta tcccaaacct
     3421 taggatatat ctcatctgtt tccaaagtaa ctgttgctcc gacaaaagaa atccaaggaa
     3481 gaattgtcaa tcagaatgac tattatcaaa tgcgagcgtt cctccaatcg acatcaagaa
     3541 aaagtcgcct tgatgaaaat agattattga gaagcgtgca atcctttgag ataactggaa
     3601 atgaagttgt ttataacatt gaggtggcag atgacaacag ctacatctta aataatgccg
     3661 ttgtccataa ctgccaatcc gacaaaggcg gtacagttaa agcatcaggg ggaggctttg
     3721 agtggcggga gtgagacgct agttgttcac ggtacgcaag atccaattat cagccaaaac
     3781 aaagctcatt gtttaggtcg aaacaacggg caagagaacg tcttatttga agtaaaaggt
     3841 gctgaagctg tacgaattag cgaaattcag gacaaaacgc caacactgaa agcaagaatg
     3901 gggacgggtg gaaataatat cccttgtatt gcccttgccg gtaatactat cggcagacag
     3961 ccacaaaacg acggaaacgg caacgtattt gatgagagtg gtgtaagtta catgcttacc
     4021 cgaactgatg ttcacgctgt cagtgctgga acaactattc gaaaacttac tcccaccgaa
     4081 tgcgagagac tacaaggctt tccagacggc tggacgaaaa tcacataccg tggcaaatct
     4141 gccgaagaat gccctgatag cccacgatat aaggcgatag gaaattcgat gtgtacaaat
     4201 gtaatgaaat ggataggaga gagattaagt gcgtatctta cctcgcaatg aaaactatgc
     4261 agctaccgag aatggagaaa tttttagttt cttgagcaac aaaatcttaa aacctagacc
     4321 tttaaagaat ggttatttaa gagttcagct tgtagatgag aatggagtaa aagactattt
     4381 aatccataga ctggtatgcg aaacttttca cggttatcca gatctacatg taaatcataa
     4441 ggacagagac aaaacaaata accgacctga aaatttagag tggtgtacac gctcagaaaa
     4501 tatgttgcat tgctcaagac ttggaggttt tagcaagcag tccgagagga tgaaaaaaat
     4561 gaatattgag agttgctcag ttcctgttgc cgcaataact ctggacggga aattattcaa
     4621 aaaatacacc tcaatgacaa gtgcaggtaa agatggtttc tcacattcaa aaatcagcct
     4681 ttgcattcag ggtaaacgca aaacgcacaa gggttacata tggcaaaagt tataatggcc
     4741 gtcccttgta tgcggtggat aggacaaagg cttaacgatt atttaactca atccctctaa
     4801 atgagggggt tatttggaga gaatatggaa caacctactg aatttttaac gaaagacgaa
     4861 cttgctgatt taacaggcta tcgtcaaaag aaaagacaaa tcgaatggtt gagggagcgt
     4921 cactatataa ttcaagatga aaacaagtat aagccattag tgctatacaa agatgtctat
     4981 gggcaccccc gccaacaata tccagaagct caatccactg ggaaatggaa atcacctgct
     5041 tatttaatgg gagtgaaaaa tgggaagacc acgcaaacaa cagaatcgct acttacctga
     5101 gaatttacgt ccaaaaacag ttacacgaaa atcaggcaaa actgtcattt attggctata
     5161 tcgcacgcac ggaaaaacgg aaatctctct aggcacaaat agaaatgagg cttttattaa
     5221 ggctgctcaa ctcaatatag aaagagaaag ccaaactgcc agaattacct tcgggcttgt
     5281 agccaaacgt tatcgagatg aagttatacc tcagaaaaaa gcgagcacag cacaaacaga
     5341 tttgtgcaag ataaaaaatc tactgctatt ctttaatgac gctcctctcg aagaaatcac
     5401 ccctcaacat atccgagagt atatgatttg gcgaaaagac acacctggat ctgctaataa
     5461 cgaattttca atgttcagtc atatttggca atacgctcga gagtggggtt atacaaactt
     5521 accaagccct aatatcggaa tgaaacgcta ccctatcaga aagcgtgaaa tttacgttga
     5581 gaacaatata tttcagatgg tatatgaagt ggcagatcag gatatgagag acttaatgga
     5641 tctcgcctat atcaccggac aacgtcctgt cgatttggtc aatatccgga aagaacacat
     5701 ttttgatggt tatctccata ttgttcagca aaaaacacaa gccaaactac gtattgagat
     5761 agtgggaaaa ctggctgata ttatccaaga taggctggag aaagctactg gaacacactt
     5821 attcagcact aagaaagggg aaaagctaac cgctagaaaa ctaggtaaaa ggttcactta
     5881 tattcgggaa caagcggtca agaataaccc ggaatacgca aatgaaataa tggcattcca
     5941 atttcgggat ctaagagcta aatcaggaac agataaagcc ctttctctag gtgaagaagc
     6001 cgctcgccaa caactaggtc atactagcgt tcaaatgacc aaaacataca ttcgaaaagc
     6061 cccaatagta acccctatca aagaaagtgt tccctcctca aaacaccagt cttaaaagac
     6121 agtttcggaa cattttgcat tttttcggaa cgtttacata aaaatcactt ataatagatt
     6181 gaaagataag taatttttgt tactcgttat tactgataat atttttaata aaaatgaccg
     6241 cttgcctttc aacaagcggt cattcccctt taatttttta ccaccgtaaa caccttattt
     6301 ttcagccgat attcactttt ttcatcgtga gccagttgca caatggttgg cttgcgttta
     6361 cacaattcac gcattgcaca cgccgtcaat gttgccagca agcatatctt gttcagagta
     6421 agaggcatcg ccgccaatca aaatataatg ctcgcccata tccaccacca ccgccaaatg
     6481 ccccagcgta tgtcctgcgg ttggcacaag gcggattttg ccgtctttgg tgagtttatg
     6541 actgctctca aaactttcaa acgccccatc attaaaatag atgccatcag gcttaaacca
     6601 atcaggatag tgcattgtta aataaccgtt catcaccgca ttgggggcgt tgattgcctg
     6661 tttttcagtc tcactcatca caaatcagct gtttgggaaa ttgggcaatc cgcctgcgtg
     6721 gtcgccgtgc atatgggtca ttaccaccgt gtcaatgcgt aaagggtcaa agccgtttgc
     6781 ctttaaaatt tcgcccactt cttcgtgttt tttgacccca cgccgttcgc aaaactgcat
     6841 aaacgggtgc caccacggct gatagccctt gtcgttggca cgactgcttt cgcccgtatc
     6901 caccaaaatc aaaccgtcat cgtgttcaat cagccagcaa ccaatcggca gtttaggcga
     6961 ccatttttta tcggtcagca catcaagcac acgggcagga cgggcaaaaa agcgtgccac
     7021 ttgatgatga attttgattt gtacccaacc tgttgtcaga caatgcactt taatcatttt
     7081 tgtgttctca ttaaaaaatc gtgggcatat tgtagaaagt gcggtaactt ttcacaaaca
     7141 ttaaaaagtt cgtatttggc tggatatgca gataaaatta caaaaatgta tgcttatttt
     7201 gaaaaaagat gaacgattta agagtaatca aaacccatct agcaatccaa aacgctttga
     7261 ttgaattatt agatgaaaag ctgtttgaaa aagtgcaagt ccaagaaatc attgaaaaag
     7321 ccttgattaa ccgcaccact ttttaccgtt attattcggg cgaaagtgat ttggtcggca
     7381 aattgataaa agaggtgaag gcggaatatc aagacctgct caaaaagcgt tttgaaagcg
     7441 gtaatttgct gcgatttatg caaaccattg gcaaccgctt attggaaaaa agacggctga
     7501 ttttggcact ttggcaaatc aaaacccctc gccatcattt gtatgacgat atgcacatgc
     7561 tgttaaaaaa cgcctttatc gcccacgcca aacggataac atcagatgat aaaaactggg
     7621 ctgagaaaaa ttgggattac caagcccata tttttgccac cattgccctt gaaagccata
     7681 aatattattt tgaacaaggc aaacttttgc ccattccaca ggtgtttgag gagtggatag
     7741 aaatggtgca ggtgttgaaa agtgtttaga aataactggt aaaattttcc ataaaaaaca
     7801 ccgctttcat cacaaaagcg gtgctttcaa atcatcaaac cttaaccaca atcttaccaa
     7861 tctgctgatt gcttgccata tattcgtgag ctttaaccat ttcatcaaag gcaaagattt
     7921 tgtcaatttc agggcgtaac tgaccgcttg ccaaaccgtc atagacaaag gttttggctt
     7981 gtgccaattt ttcaggtacg gtggtaattt caaagagttc atacccccgc acggtcaaat
     8041 gcttacccaa aatcgggaac actggcacag caatatcatc atggcttaac gctccataaa
     8101 tgatgtaacg accatcttgt gccattgcat tgatgatttt tgccgcctct tttctgccca
     8161 cagggtcaaa taccacattg acgcctttgc cattggtgat ttcaaaaagt ttggcggtta
     8221 catcgtcttc gcttgtggca atcacaaaat ccgctccttt ttccaaaagt acatcgcctt
     8281 tggcgtgggt gcgagacaag gcaatcacgg ttgccccttg cattttggcg atttggatac
     8341 tggctaaacc aaccgaactg gttgcaccgc ccagcaccac aaaatcgcct ttttgtactt
     8401 tgccaaactc aatcagtccg ccataagcgg taacaaacgc catccaactg gcggacgctt
     8461 gttccattga caaattatca gggtgcttga ccacagcgtg ttttggcata ttgacgattt
     8521 cgccataagt gccgtattcg gtaaacataa aggacggaat aatgctcacc ttatcgctaa
     8581 tggcaacttc gttcacaccc tcgccaatcg ccacaatcac accagcccct tcataaccca
     8641 aagtcgcagg gaatacaggg tcaatcacat acgccccttc acggtacatc atttcggcac
     8701 ggtttaagcc aatggcttgg atttggattt gtacttcgtg tgcttttggt gcaggaattg
     8761 ctacatcaac gatttgcaag acatcaggcg aacctgtttt tgtaaattgg atttgtttgc
     8821 tcattgtttt gaccttttgt gtaaataatg ggcgtatttt aatgcaatga atttatttta
     8881 aacacaacat caattgcaaa acacttttgc taaatttaca taaatacatt ttcacaatgt
     8941 ctgaaaagtt gttttgcaaa ttttaaaaag aaaaccaccg cttgccgatc acaagcggtg
     9001 gtttttgtgg gttattttgc aagaggtgtc agcttggcta cagtaagcgg ataaatgcga
     9061 cgccggctaa gagtaaggta acgccgatga tctgcagcgg tagaatgggt ttttgtgtaa
     9121 tgccgaacag accgaattta tctaccagca ggctgccgca aatcaggcca gagaggacga
     9181 gcatcaccac cgagcctgtg ccgatttggg ggacgagcca aacgccagcg aggataaaca
     9241 ggctgcccag tatgccgccg ctccatatcc aaaacggttt gccttcggtt ggctggcaga
     9301 gtttcggcag gcttttttca taaaacagca ctaccagtaa taagccgatg gcaccgacac
     9361 cgaaggagac tgttgctgcg ccgagtgatg agccgggctg tctgccgaat tcgccattaa
     9421 cggcggcttg ggttgctaat gcggttccgc ctaatatgcc gactgcgcgc cacagccata
     9481 aatttgcgtt ttctttgcgt tttagaccgg acagatgggg cagtaccacg gcaatccata
     9541 cgccgaataa gactaaacca atgccaaaca ggcggctggc cgtgaaggct atgtaaggcg
     9601 agttaagcca agcgaaagtg tcgatcagca cgcccatcag cacttggcct aaaatcggca
     9661 tgaccgcagt ttgtacgccg ccgagcttgg ggaagatcag tacgtttgcc gttagcccca
     9721 ccatgccgag taatccgccc gtccatgccc ataaggggac gttgcctaaa ttgtcgaggc
     9781 taaatgctgg tgtttgttgc atgatgagcg agagtccgag tagaaacagg aggcctacgc
     9841 tgaaagagac aaacgaggtt aaaaatgccg cacccacgtg catacgcaaa cgggcgttga
     9901 tggctgattg aaatgcaatc agcacgccgg ctaaaatacc gataataaat gtcatgacta
     9961 actgggttgt gctgccgcct caaaatgagt ggtggttgaa aagaaatgcc gtctgaatgc
    10021 ggattcagac ggccttaagg cttggtatcg gcgtttacct gatgttgaat agccgttttg
    10081 cctagccggt ttattcgatg aatttcacca cggtttcgaa atctttacgt gctttttggc
    10141 ggatttcttt atcacggtaa ccgaaggtac acatcaccga tacgccccat tcgcttgggt
    10201 caaataatcc ttccgctgcc aaaatatcgt tgacttcttg gtaagcgaaa ccttctatcg
    10261 gacaagaatc tacgccaatt aaagctgcac cggtcatcat attgcccaat gcgatgtagg
    10321 tttgtttgct tgcccagtca aacaggctgc gttcgctgtc taaaatgccg atatctttct
    10381 cttggaattt tttatacacg gccatggctt tttcgcgcgc ttcgccttgt aaacctcgtc
    10441 tatccataat ttcagaaaaa tattggctgt cgtaacgggc atttttcttc gctaaaatca
    10501 ccacgatatg gcttgaggtt tccatagttg gaatgcccca gcagtaaggt ttgatttttt
    10561 gccgtaattc agggttttgc aacactaaaa actgccaagg ctctgagcct accgaacttg
    10621 gacttaaacg accgagttcc agaatatagt tgaaatcttc agccggaatt tttctgctgc
    10681 cgtcgtaaga acgggtagat gcacggtaat gaaaggcatt gattacgtct tctttgttga
    10741 aaaattgcat ggaacactcc taaaaatgca aaacagtctt ttcagacggt ctgaaaagtc
    10801 tagatgaaat acggataagt ataaaagatt taagttattt ttaataattg ataattttga
    10861 tatttaggta taagttgacg tgatgagaaa aaacagaccc tctgaatgtt caggcggtct
    10921 ttaacgttgg ttgtttacat aaataatccg cgttcatatt gcttcggtac aaactgcatt
    10981 tcactgctgt ctgctgcatt ttggtcatat tgcgcattca atacccagta cggatcgcgc
    11041 aataaggctc ttcccacagc cactaaatcc gcatcgccca tacctaagat atgatcgcct
    11101 accgccggat tatccaacat acctactgca attaccggtt tgcccgtagc gagcttcact
    11161 tgacgggcaa agtctacttg gtaacctgcg taaaattcgg ggtgattacc tgcatgcaat
    11221 acaccatcac caccaccgct gatgtctaag acatctgcgc ctgcatcggc aaaacgtttc
    11281 gctacctgca aaccataatc caagccaaag ccgttttcac cgtattcttg tgcagaaatg
    11341 cggacaatta acggcatttc agacggcatc acttcacgtg ctgcctgaat cacttgctcg
    11401 ccaaacaaca ttttgtcttg gccgtactca tcactgcgct gattggattt cggcgaatag
    11461 aattggtgaa ttagataacc gtgtgcgccg tggatttcaa ttgtatcaaa gcctgcctca
    11521 acggcacgtt tgaccgaatc cttaaaggct tgaaccaatg ctttgacttc gtctgtcgtc
    11581 agctcgcgag gtgtaatcag attttgtccg gcataatcca actcaccgta gtgaattgca
    11641 cttggagcca ctgcatccgg ctcgtcttgg gctttgcgtc cggcatgggc gatttgcaca
    11701 ccgatttttg ccccttgagc atgaacgctg tctaccagtt ttttgaatgc ctgttgttgt
    11761 tcatcgttcc ataagcctaa gcagtttggc gtaattctgc cgtttggcgc cacattggtc
    11821 atctccacaa taatcaagcc gacaccacct actgcacggc tggtgtaatg cacgaaatgc
    11881 caatcgttcg gtacgccgtt ggttgccgaa tattgacaca ttggtggcat aaccacacgg
    11941 tttttcaatg ctaagttttt aatgttaaac ggggtgaata attttctgaa cttcgccatg
    12001 ttgccttcct taatgaaata gattaggtgg aatgataatt cagtgctatt atctattcaa
    12061 attgattatt gtgatagtta ggtataaaaa tgagtgatat aagaacactg gatttcaatt
    12121 tgctcaaagc ttttgtggtg ctgctggacg aatgcaacgt tagccgggca gcacaacgat
    12181 tatccatcac ccaaccggca atgagcggta ttttaaaccg cttgcgcgag agttttaacg
    12241 atccgttatt tgtgcgagtg caacacggta tgcagccaac cgaccgcgcg ttgcaactgg
    12301 ggcaaaccgc acgcaacatt ctgcaagata tcagctccat gctgcaacca cccatattgg
    12361 aaccggaaca tctgaatatg accttgcgta ttgccgcaat ggattatgta caacaaatta
    12421 ttgccttgcc gctgattctg cgtttaagac ggcttgctcc gaatgtaaaa gtcgccttac
    12481 tgccggtgca ggggcaaaat atcaaaactt tgttcgagca aaaaaaaatc gatcttgcct
    12541 tggtcagccg ccaacattta agcacggata cgctgaaaac ggtattatat gaagaacgct
    12601 acgtatgcgc gatgagcaaa acacacccga tggcgcaaac accgctatcg ctcgatcaat
    12661 tctgcaatct tcccttcgca atgctttctt acaacggcgg agaattcagc ggagctacgg
    12721 atctagcgtt acaaaagata ggactacagc gcaaagtaat ggtctcggta aaccatattt
    12781 ccctgctgcc ccagctgcta caaggttccg acttagtcgc agtattgccc gaacgcttag
    12841 caaaaacctt acccaatgtt tatttacaac ctccgcctat agaggtagaa ggcttcacca
    12901 tgatgatggc ttggcacgaa agaaccgaac aagatacggc gcatcgatgg ttaagagagg
    12961 tgctgcaggg tgtggtaaaa cctaaacagg ctctttaatt attctttctt ttgctatgaa
    13021 aaaagccgtt tatattttta gataaacggc ttttttgcat tctaatatta gtatttttct
    13081 acaaactgag cataggcatt aatgaagttt tgcattgagc tttttaatgt ctcagaggca
    13141 atttcaccct gttcatcaaa tacgcctgta aataagtttc ctacgtttaa tgcgaaaggt
    13201 aaggttggca tatttacaaa tgagcctgaa gtaatagtac gtacttgatc agctgcacgt
    13261 acaccgcctg ccgggcttgc gccaacggtt acgatacctg ccggtttgcc aatccatttg
    13321 ctttgcccca ttgggcgaga aaccacgtca atcgcatttt taagcattgc agaaaagctt
    13381 gcattatgct caggtgtgac taataacacg ccatctgcca cagcaaccgc ttcacgcact
    13441 ctggtgtatt gtgccgggct gttttcatct aaatcacggt cgtaaagtgg taagtctgca
    13501 atatccacaa tgtttaattg aatgcttgca ggtgccattt tttgtaagtg acgaacagtc
    13561 aagtgactaa atgaagtttt gctgccgcta ccaattaata ctgcaatttg ttttgccatt
    13621 ttataattcc ttagtacata gagaatatag gcattttatc cctttcaatc tgtttcataa
    13681 agcgcttatg atgaaaagca ctatttactt atattaaata attttgcaaa ttttaggcca
    13741 aatttgaccg cttttatctt tagctaaaaa ggttataatt tgtagaaata gatcttaatt
    13801 tagggttttt atgctttttc taaacaaaat aaaacagctt ttcatcttcg cctttacgct
    13861 agtgttatct gcttgcagtt tggttgttta taagccagtt gaaacaatta aacaggtaaa
    13921 tgttgaaaga ggttatcgac aaaaaaatgt gatcgctgaa agtgcaaaag acggtaatat
    13981 tgttgtcatc atgttttcag gtggtggaac aagagcggcg gcgcttggtt atggagtgtt
    14041 ggaagagttt aaaaaggtaa gggtgaaaga aacaaataaa ggtaatactt tattagagaa
    14101 tatagatatt gcctttggcg tatcaggtgg atcgatatta gccacttatt ttgcgttgga
    14161 aggaaaggat atcattccta aatttgctga ccgtttttta aaagcgaact ttcaaaaaga
    14221 tattattaca gaggtgtttt cgttatccaa tcttcctcgt ttaagttctc ctcaatatgg
    14281 gcgtggtgat ttattgcaag aacgcttaaa ttttgccctt tatcatggta aaaagtttgg
    14341 tgatttagtg aaaaatcgta aaggaccttt tgctgtgatt agcgcaacag acatgaacat
    14401 tggtcaaaaa ctgaccttta cgcaagaaac ctttgatggg ctttgtttaa atttgaatga
    14461 tttagaaatt tcccgtgctg ttgctgcttc tagttctgtt cctctgattt ttgcgccgct
    14521 tacactgaat aacaatggtg gaaattgcca ttttagtatg ccacaagaat ttagtgctag
    14581 agaaaaagca attgatggac taattacaaa aaatattgaa gaaacgaatc atatactcag
    14641 cctttatcaa gatagtaaag aacgcccctt tatccattta gttgatggtg gattaacaga
    14701 taatttaggg cttgccagtg tgctggaaat atctgatgtt atgggtattg aagagatgta
    14761 ccagtatatt catcagctta gggtgaaaaa tattgtagtg attaatgtaa atgcgcaaaa
    14821 tgaagtatct agcgagatcg ataagaccgc aaatgtaccg ggggtggctg atgtagtgaa
    14881 tacaatagtt aatgtgccaa ttgatagaac gacacaaatt aatttacaac gttatcgcca
    14941 gtttacagat ggttggaatg aatatgcaaa taaacagcca tcaaagatcg aaatgcattt
    15001 tgtcagttta ggtttaaaag aattacctga tggtgattta aaaaaagatg tgctaaatat
    15061 tgcaacatca ttttatttgc cggaagagga tgtagataaa ttacgtgaag ctgctcgggt
    15121 tttattgcag caatctcaag aatataatgc ggcattaaaa acactgcagt agtaaaaaac
    15181 cgaccaagcg gtcggttttt ggtatttttt tgcaaatatt tattcgctga tgtcgtttaa
    15241 atccaacaac tcttgcgaaa gaataatgcc ggttaagtca gcataaacgt aatcttcggg
    15301 gaagaaggtt acaccgccaa aattcacagg cgtatccact tcgccaatgt cggtattatc
    15361 tgctcccact ggaattggcg ctaaagcatg aataccgata tctaatcttt ccaaaatatc
    15421 taattggcga accgcaccat aaacgatgat accttcccag ccgttatcta cagcaagttg
    15481 agccagctct gcgtcaatta aggcacgacg aaccgcaccg ccaccatcga ctaacagcac
    15541 tcgcccttca ccctcttctt ccaaaacttc agcaattaaa ccgttgcttt caaagcattt
    15601 aaccgtggta atcttcccaa agaaggaaga agcaccgcca aagcttgaga aaattggttc
    15661 aaccacatca acttggtcag aataaagatc gcaaagtgca gaggtatcaa tacgcataat
    15721 atgctcctgt tcgtagatta tttagctaaa gtataaacct tcgcccaaaa tttgcaaaat
    15781 tttatcgaaa aaagaccgct tacaggcttt tttcttatgc tttattttct agtgaaccgc
    15841 ttttaatatg caattccatt tggttgtaag gaatagatat acctgcttca ccaaaggcta
    15901 attttacttg ttcgataatt tcccaatatg ctgcccagta atttggtgtc tgaacccaag
    15961 ggcgaacaac aagttgaaca ctatgcggtg ctaaagcgcc gactgctact acaggtgccg
    16021 gatcttttaa tacataagta ttggcgtcta aaatgcgttg gataatctct ttcgcctctt
    16081 ttaagttaga ttcataagaa atatcaaagg tgaaatcaat acggcgtgtc gggttgttag
    16141 agtagttgat gatgctgtca gaaaacactt tgccgtttgg taataacacg gttttgttat
    16201 cgccggtgcg aagttccaac actaaaagcc ccatttgttc aaccacgccg gtcattccgc
    16261 cggtttcgat taaatcccct ttgcgaaatg gcttgaagat taacaacatc acgccggcag
    16321 caaagttttg taatgagttt tgtaatgata aaccgatggc taaaccggca gcaccgatta
    16381 atgcgaccag cgagctggtg ttaatgccga tttgtgaaag cgaggcaatc accacaatta
    16441 acagcagtaa aaaatagctg attgagacaa taaaactttg cagcatttca tctttggttg
    16501 attttaatgc ggctttaccg agtaaacggc taattaggcg ggcaagaaat ttcccgacta
    16561 caaaaatcgc aatcgccagt aaaattttgg tgccataagg gataatccac tcatttagca
    16621 tagtttcaat attcatatta ctgactttgt ggattacttt ttcggtttcg gcaaccacgt
    16681 caatgtttgg agctgtttcg gtgacttttt cagtcatatt gtttccttaa aattaaaatg
    16741 aaaaataagc ctagcgaatt tgcctcactc gctaagcggt tttgtgctag aatttagagc
    16801 aaaattttct ctaaaagaca agataatgac aacagaaaaa gtaattagtg ccggcgttca
    16861 attttttacg atcagtgaag atgaagccgg acagcgttta gataattttt tattggcaaa
    16921 gctcaaaggc gtgccgaaaa gtttgattta ccgcattgtg cgaaaaggcg aggtgcgggt
    16981 gaataaagga cgaaacaaac ccgaatataa attacagcct gatgatttag tgcgtgtgcc
    17041 gccggtgcgt gtggcggaaa aaaatgaagc cccaatttcg actaaattaa acaaagtggc
    17101 ggagctggag agccaaattc tgtatgaaga tgagtcaatg ctagtaatta acaaaccttc
    17161 aggcattgca gtacacggtg gcagtggttt aagttttggt gtgatcgaag ccttgcgtgc
    17221 attacgtcca caggctcgtt tcttggaatt ggtacaccgt atagaccgtg atacatcagg
    17281 cattttgctg gtggcgaaaa agcgttcggc gttacgttcc ttgcacgaac aactgcgtga
    17341 aaaagtagta caaaaagact atcttgccct tgtgcgaggg caatggcagg ctcataccaa
    17401 agtgattaaa gctccattgc taaaaaacga acttgccagc ggtgagcgaa ttgtacgggt
    17461 gagtgaagag ggtaaaccgt ccgaaacccg tttcagcatt gaagagcgtt atgccaatgc
    17521 cactttggtg aaagcttcgc ctattaccgg aagaacccac caaatccgtg tgcataccca
    17581 atatgccgga cacccgattg cgttagatga caaatatggt gatgcggaat ttgacagcaa
    17641 aatgaaagaa gtgggcttac agcgtttatt tctgcacgcc catgctattc gttttgaaca
    17701 ccccaaaacc ggcgaagaaa tggtcattac cgccccgctg gataaaactt taaaaggcgt
    17761 attggcaaaa ttaagggcta attactaaat aacttaatga gagagtaaga tagcgcaagc
    17821 gtccacgctt gtgctgtaaa tcaacataga gtggtacaag cgtggacgct tgcaccaaca
    17881 aaatataagc aaaaatatgc aaatccattt caaaaatttt caaaaaaatg accgcttgtt
    17941 agatttaacc acaccgcaaa ttatggggat cttaaacttc acgccggatt cattttccga
    18001 ttcgggcaag tttttttccc tcgataaagc cttgttccaa gcggaaaaaa tgttagctga
    18061 tggggcaagc attattgata ttggcggtga atccacccgc cctaatgcgg cgattgtgag
    18121 cttagaacaa gaattagagc gtgttgtgcc ggtggtggag gcgatccgca gccgttttga
    18181 ttgcttgatt tcggttgata gctccaaagc agaagtattc aaagagtcgg caaaagtcgg
    18241 tatggatatc attaacgata ttcgagcctt aaccgagccg aatgcgttgg cagcggcagt
    18301 agaattgggc ttgccggttt gtttaatgca tatgcaaggc aacccgcaaa caatgcaaca
    18361 aaatccgcac tatgatgatg tgttggaaga tgtggcagat ttcttaaatc aacggatttt
    18421 cgagtgcatc accgcaggca ttcccaaaga acacattatt ttagaccccg gttttggctt
    18481 tggtaaaagc gtgaaacaca attaccaatt attgaaacac cttaaagcct ttgtggattc
    18541 aggcttccct gtgcttgccg gactttcccg taaatcaatg attggtgcgg tgttagataa
    18601 accggtagaa caacggctac ttggctctgt agtaggggcg ttattagccg ctcaaaatgg
    18661 ggcgaaaatt ttacgggtgc acgatgtggc agaaaccgcc gatgcgttaa aaatctggca
    18721 ggcaatgctg gaatcagata atgaggaaaa atgatgacaa ccttagttta tggcattaaa
    18781 aattgcgaca cagtaaaaaa agccttgaaa tggctcgaag atcataatca aaacccacaa
    18841 ctgcacgatt accgtgtgga cggtttaaat gccgattggt tagtggaaat ggaagcaaaa
    18901 ttcggttggg aaaacttagt taataaacgt agcaccactt ggcgaaacct tgatgaggaa
    18961 attaaaaaca accttaaccg tgagtcggca ttaaaagtgc taaccgaaca gccgacccta
    19021 attaaacgcc cgattgtgat taaagaggat attgctttga ttggttttaa tgagaaagag
    19081 tatgtggctg cgtttaatta attttttccc ctgcttgtag ggacaggtcc tgtgcctgtc
    19141 cgtagtcttt aggattgttc gggcgggcac aggacccgcc cctacaggat atatagcaaa
    19201 aaattcaccc aaaacaaccg cttgtaacct atgaaaaatg aaattatttc ccttgcacag
    19261 aacctaatcc gccgtgattc catcagccca caagacaaag gctgtcagca agaaattgca
    19321 caacgtcttg aaaaactggg ctttaatatt gaatggttgc cgtttggcga caccttgaat
    19381 ttatgggcaa cgcacggctc ggaaaatggt aaaacagagc cttgcattgt gtttgccggg
    19441 catacagatg tggtgccggt aggcgatgaa agccaatggg cttatccgcc gttttcggct
    19501 gagattgtag atggaatgct ttatgggcga ggggcggcag atatgaaagg ctcgctctcg
    19561 gcgttagttg tggcggcaga aactttcgtg caacatcacc caaaccataa gggcaaagtg
    19621 gcattattga ttacctccga tgaagaggca gcagccaaag acggtacggt aaaagtggtt
    19681 gaaaccttaa tggctcgcaa tgaagcggta cattatgcgg tagtgggcga accgtctagt
    19741 agcaaggtgt ttggcgatgt gattaaaaac ggcagacgtg gttcaattac ggcagatctc
    19801 tatatcgagg gcattcaagg gcacgttgcc tatccacatt tggcggaaaa tccggtgcat
    19861 acgtcactgg gttttttaac cgagctgacc acttatcagt gggataacgg taacgaattt
    19921 ttcccgccta ccagtttgca aattgccaat atcaaagccg gcacaggcag taataatgtg
    19981 attccgggcg agctttatgt gcagtttaac ttacgttatt gcactgaagt gaccgatgaa
    20041 atcatcaaag ccaaagtagc ggaaatgctc gaaaaacacg gtttgaaata ccgaataagt
    20101 tggaatttat caggcaaacc attccttgcc ggcaatggaa aattggtcga agccgcctta
    20161 caagcggtcg aaaatgtcac aaaaattacg cctcgtttag acacaggtgg cggtacttcg
    20221 gacggtcgtt ttattgcatt aatgggggca gaggtagtgg aatttggacc actgaacgcc
    20281 actattcaca aagtgaatga gtgtgtgagt gcggatgatt tggcacattg tggcgaaatt
    20341 tattatcaaa ttttagaaaa attattggca actgcataac cctaaatagg cagaatgtta
    20401 tcaaattgta ttctgcctat tttttatgta gctattctgt taaacagcgt ttacactagc
    20461 ggcagttttt atatttatag gtaaatgtta tgcaactcta ctcttatatc tgcttgctgt
    20521 ttgggcttgc gatgtttatt tcgtttttta cccgaaaatt aaacgaaaat attcaaacca
    20581 ctattgcaat tacagcctct gcccttgtcg gctcccttct tattcttacc ttcggttctc
    20641 tcggctggtt taatgttgat aaacttgcca tttccatttt tgaacaactc gattttaaaa
    20701 gcttcctgtt aaacggaatg ctggggttct tgctttttgc cggttcactt gggattaaac
    20761 taccattaat gaaagagcaa cggcgggaaa ttgcagttta tgccttattt tcaaccttag
    20821 tttctacttt cttgatcggt gcgttaattt atggcgtggc aaggctactt gggttagagc
    20881 tcggctttgt gtattgtttg ctgtttggct cactgatttc gccaaccgac ccgattgccg
    20941 tattggcaat tatcaaaagc ctgaaagccc caaaacgcct ttcgatgcac gtggagggcg
    21001 aatctctgtt taatgacggt atcggcttgg tgatttttac cactatcttt gccgttgctt
    21061 ttggcggaca agaaccaaac cttagcggta ttaccggact gttcttgcaa gaagcggtag
    21121 gcggtatcgt ttttggctta ttaaccggtt ttgtggcaca taaatttatt tccgcaaccg
    21181 atgacggaag ccttgaaatt ttaattacgc taacgattcc aacagtcggc tttgtgattg
    21241 caaactacct acacgtttca ggggcattaa caatggtagt tgccggtatt atgattggca
    21301 actggactcg ccgttccggt ttctccgaac agagccaaaa atatcttgat cacttctggg
    21361 agatgatcga ccattcatta aactacctgt tattcctgct tatcggctta agtacactgt
    21421 tagttgattt cacctttatt ggtggggtgt taatgttggc agcaattcca atttgtttgc
    21481 ttgcacgcta tatcagcctg tggattccat accaagtgtt aaaacgtttc cgtacttata
    21541 acccgtacac cttaaaaatt atgacttggg gcggtttacg tggtggatta gcccttgcga
    21601 tggcactttc cgtaccggca ggggctgcgg tggtatcgag ctcagaaggc aatcttgatg
    21661 tacgtgattt gattttgtta atgacttatg cggtagtcac tttctcgatt ttagtacaag
    21721 gttcaacggt tgaaccgatg ataaaaaaat ccaagttggt agatccaaga aaagtggcac
    21781 tcaataaatt aggtgcacct gatgatgtaa ttccacatat ttaatagcat ttataactga
    21841 ataacatatc attttgctaa agattattag ccatctagac ggctttatat ttaaatacct
    21901 ctcacgttaa tttgttgaga ggtatttttt atgttattca caggattatt atgtggcttt
    21961 ctactcgggt ttgtgatgca aagagggcgt ttttgtatta ccggagcatt tcgtgatctc
    22021 tatgtaacaa agaatagccg tatgtttgtg gcacttttaa ttgcaattac ggtgcaatcg
    22081 atcgggattt ggcttttgta tgaagccggc tcttttagtt ctccggcgga agatttgcct
    22141 ttgctcgcag tgatcattgg ggcatttctg tttggtatcg gcattattta tgcaggcggt
    22201 tgtgctacag gaacgtggta tcgtgccggt gagggtttaa tcggcagttg ggttgcactg
    22261 gttatttatg ggctgttttc tgcttctatg cgaaccggtg tgttagcccc acttaatcaa
    22321 gagctaaaaa gcaatgtaat tcaacaccgc acgatttatg aaacatttgg tatttcccct
    22381 tgggtgttag tgtttatcct gagtgtaatt acattggcat tatccgccca cagcatttaa
    22441 aaggttaatt ttttaaggag taataaagat gaacgtacgt ttacctgcct cagggcttgt
    22501 ttgcccgttt ccattagtcg aagccaaagc ggcgatggca aaattgaata aaggcgatag
    22561 cttaacgatt gaatttgact gtactcaagc aaccgaagcc attccaaatt gggcggaaga
    22621 ggaaggctat gaagttaccg attaccaaca acttggtgat gccttgtggg aaattacggt
    22681 ggttaagtaa ttagcaataa aaaagctcta cttttttgta gagcttttgc tttgagtttt
    22741 gtatttacta aggattagag taaacccggt tgacctaatg ctgggtctgt tgctcttgca
    22801 gcaatagcat cttcaaccgt catacctaat gcttttgcca caccttcacc atatgccgga
    22861 tcacaggcat agcagttacg aatatgacgg tatttaatga agtctaatgc atcgcccata
    22921 cctgcagcag tattattgaa taatgcttgt ttttgttcat cattcatcat attgaacaat
    22981 acacgtggtt ggctgaagta gtcagcatcg tcttcacgat agttccagtg ggctgcatca
    23041 ccattaattt tcagtggtgg ctctgcatat tgagcttgtt cttgccattt gccgaagctg
    23101 tttggttcgt agtgaatggt actaccgtag ttaccgtcca cacgaccttg accgtcacga
    23161 gcgttgctat gaaccgggca acgtggagcg tttacaggga tttggtggtg gttcacacct
    23221 aaacggtagc gttgagcatc cgcatagttg aataaacgag cttgtaacat acggtctgga
    23281 gacacgctga tgcccggcac taagttactt ggtgcgaatg cagattgttc cacatcagca
    23341 aagaagtttt cagggttacg atttaattca aactcaccca cttcaattaa cggatagtct
    23401 gatttcggcc ataccttagt taaatcgaac gggtggtatg gtactttgtc tgcatcagtt
    23461 tcaggcataa tttgaacaaa cattttccat ttcgggaaat cgccacgctc aatcgcttcg
    23521 tataaatcac gttggtgact ttcacgatcg ttagcgataa tagcggctgc ttcttcgtta
    23581 gttaagtttt taatgccttg ttgtgtatgg aaatggaatt tcacccagaa acgctcatta
    23641 gctgcattga tgaagctata agtatgtgag ccataaccgt gcatatgacg atatgaagcc
    23701 ggaataccac gttcactcat tacaatagtc acttggtgaa atgcttctgg taataatgtc
    23761 cagaaatccc agttgttagt tgcagaacgc atattcgtgc gtgggtcacg tttaaccgct
    23821 ttgtttaaat ccgggaattt acgtgggtca cgtaagaaga acacaggggt gttgttaccc
    23881 accatatccc agttaccttc ttcggtatag aattttaatg cgaaaccacg aatatcacgc
    23941 tcagcatctg ccgcaccacg ttcacctgca acggtggtga aacgagcaaa catttcagtt
    24001 tttttaccga cttggctaaa aattgccgca cgagtgtatt tagtgatgtc gttagttaca
    24061 gtgaaagtac cgaacgcacc ggaaccttta gcgtgcatac gacgctcagg aatgacttca
    24121 cgcacgaagt tcgctaattt ttcatttaac cataaatctt gcgctaataa tggaccacgt
    24181 ggacccgctg ttaagctgtt ttggttatca acaacaggtg caccgttgtt cattgtcaaa
    24241 tgtgtaacag gacatttaga cataatagaa tcctcataaa ttagaaataa
//
LOCUS       DANLXD010000028        24012 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.028, whole genome shotgun sequence.
ACCESSION   DANLXD010000028 DANLXD010000000
VERSION     DANLXD010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 24012)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24012)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24012
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.028"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(348..995)
                     /gene="rnt"
                     /locus_tag="PXD18_000917"
     CDS             complement(348..995)
                     /gene="rnt"
                     /locus_tag="PXD18_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010130043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HDL6301366.1"
                     /translation="MEQTTEQIDYKLLKHRFRGYLPVVIDVETAGLNAQTDALLELAA
                     ITLKMDEQGYLVPDQQCHFHIAPFEGANINPESLKFNGIDIDNPLRGAVAENIAIPEM
                     FKMVRKAMKEQGCQRAVIVAHNAAFDQGFLQAAIKRINAKRDPFHPFAMFDTATLAGF
                     MYGQTVLVKACQVAKIPFDGKQAHSALYDTERTAELFCAMVNRLKDLGGFPPLSD"
     gene            complement(1080..1487)
                     /gene="gloA"
                     /locus_tag="PXD18_000918"
     CDS             complement(1080..1487)
                     /gene="gloA"
                     /locus_tag="PXD18_000918"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HDL6301367.1"
                     /translation="MRILHTMLRVGDLERSIKFYTDVLGMRLLRRSENEQYKYSLAFL
                     GYADESESAVIELTYNWGVDKYELGTAYGHIALGVDDIYKTIEDVRAAGGKITREPGP
                     VLGGTTVIAFAEDPDGYKIEFIENKDAKAALGN"
     gene            1577..2392
                     /locus_tag="PXD18_000919"
     CDS             1577..2392
                     /locus_tag="PXD18_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301368.1"
                     /translation="MAHDHDSPSKLEISTHAALPMVLMLFIEMALNFYSAPKNSIFIS
                     PYLLAFFVTSLISFLVLWKGEICRGQASRLSFILPFLLIFAVGNFLYSIGFTPKHNPM
                     AVASIAAVFACLIYFRLPEDQTLYNTLMYCGLAISSIGIIQYLAIYWFELPSLFNGIR
                     ANNFAQVLLGILLAGWYLMLAKSRLDVFLKLLVKTALVVLILNYCWTAFVLYQHLQIM
                     PDMPLLSFIIYFAAQFVILLMLAWLLLGKNIKNPTAWTVATLLAILYPFANVV"
     gene            2396..3142
                     /locus_tag="PXD18_000920"
     CDS             2396..3142
                     /locus_tag="PXD18_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301369.1"
                     /translation="MKRALKFFGIATVLSVVAIYYFLMPSHYLATPINWILPKAWKVQ
                     LPQGLNLNWQGSSLAQFQLSYRDCPLLSADKTDLGWIEKNHLSVDKLDIDYRCLALFP
                     QNEHSNSDTSLNALLAVIPDGEATIHALNWKNLPTDFNPRLQRLFEQTAIKLSLSKGE
                     IQATAAQQAVKFAANFANGRLNADLSYQPNEKEQHNLRISAEIEDNFTQLPPTISAEY
                     DWQLSYEIIANKALQKGALFSVGKKMPHKS"
     gene            3328..5103
                     /locus_tag="PXD18_000921"
     CDS             3328..5103
                     /locus_tag="PXD18_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbH domain-containing protein"
                     /protein_id="HDL6301370.1"
                     /translation="MPLKTAIRISLLSQNSWGKGNIVISNSDGEITEKGLNLPLRLTG
                     NIKHGNFILYSSVPLDFQGNFDDLSVKFLPSSLLRLTGKERYLTIEDLRFPLAGIKID
                     KHGIHGRLHAILRGQSPDFNNIEFHLDGQAQNFKAGALDFFQDPKDANAVKDSWKWRI
                     WGASILKAFNSKVNLSGRGQWHKQLVRLEELKGDLATVKLADTTISKITLNNTQAIRF
                     NVKKFTLDGAVMLQSPEIAFSYGGVLPKPRVNLAFDGEVEKLRFKGAVNTTELGPLKL
                     FARRQLSQDASQIIGKLYWPEQSAQGFQPLFPFRSQWVINNGTIRGETAFSAGSKNGL
                     IAGGHLAIRNGGLSLPNGEAKGIEFSLPYRYQNGRFHFGAKKPLDVKIAQIKLGDLAL
                     DNASMKLNGYYPYTKAKPLNLNQLSFDLFGGKLNVKRFALPQTELAYLNLERIDFEQI
                     LQFMQYQQIDLKGKANAILPFWLSGKPCYICDGLLTQAETSYLTFTPELLSEMQKSGY
                     TEQILLHLVDKSTINDFRSLINVGPKGDLVLDGKLKLSSNQNKSKVNLNYNHRENLFD
                     LWHLINYGSQFEQKLENYLYQKLER"
     gene            5121..5315
                     /locus_tag="PXD18_000922"
     CDS             5121..5315
                     /locus_tag="PXD18_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnbE family lipoprotein"
                     /protein_id="HDL6301371.1"
                     /translation="MKPATFYFAIFLLNLTACTPKVQLETPSEGITINMNVVVDHRID
                     VKMDEKSRAVITKSENKTKN"
     gene            complement(5312..5785)
                     /gene="folK"
                     /locus_tag="PXD18_000923"
     CDS             complement(5312..5785)
                     /gene="folK"
                     /locus_tag="PXD18_000923"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDL6301372.1"
                     /translation="MQTVYIALGSNLENPLEQLKQAVEKLKKFANEFEISPFYGSKPV
                     GPQDQPDYVNAVAKFSTDLSPTALLDKLQSIENEQGRVRVRRWGERTLDLDIILYGNQ
                     QIQTERLNVPHIEMKNREFVIVPMFDLTPDLVLPTGEKLADIYAQFKDHQMIIFS"
     gene            complement(5988..7319)
                     /gene="pcnB"
                     /locus_tag="PXD18_000924"
     CDS             complement(5988..7319)
                     /gene="pcnB"
                     /locus_tag="PXD18_000924"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HDL6301373.1"
                     /translation="MLHKKFAVNASQYRISPKDFPKNAISIVDKLQIAGYEAYIVGGC
                     IRDLLLEKKPKDFDIATNARPEEIQRIFGRQCRLIGRRFRLAHIVYGREIFEVATFRA
                     GHESHRNDKISKVSDEGMLLRDNVYGTLREDAERRDFTVNALYYDIKRNLIFDFFNGI
                     EDLRAGKLSLIGEPTIRYQEDPVRMLRAVRFMAKLDMFLDKATASPIRDMAVLLTNIP
                     AARLFDESLKLLQTGAGLKTYQLLREYELWQFLFPVLPAFFTAKGDSYAERMITKALN
                     STDERIADKLPVNPAFLFAALLWYPLREKMEQLKNEGGFNSYDAMMLAANDVLAESCN
                     AIALHRRHTSVIRDIWALQFQMMKRSGNRPQQTLEHVKFRAGFDLLVMRAEIEGGDLV
                     ELSAWWHEYQFSNEGQRTELLKSVRHLGNVPSEKKKTRRRRTFKKKPKVNG"
     gene            complement(7564..8010)
                     /gene="dksA"
                     /locus_tag="PXD18_000925"
     CDS             complement(7564..8010)
                     /gene="dksA"
                     /locus_tag="PXD18_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HDL6301374.1"
                     /translation="MTQAAKTSLGLLALAGVEPYELKKDEEYMNEAQREHFTKILKAW
                     HSQIMEEAERTKSQLQEDMTNFADPNDRASQEEEFSLELRNRDRERKLLKKIEQTLYK
                     IQEDEYGYCETCGVEIGIKRLEARPTADLCIDCKTLAEIREKQLGL"
     gene            complement(8260..9213)
                     /gene="thiB"
                     /locus_tag="PXD18_000926"
     CDS             complement(8260..9213)
                     /gene="thiB"
                     /locus_tag="PXD18_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate binding
                     subunit"
                     /protein_id="HDL6301375.1"
                     /translation="MKFILSSLALLSASVYANQPTLTVYTYSSFASEYGPAPKLEQNF
                     EKECGCDVKFVPLDDSVTMFNRLRLEGAKTKADVVVGIDNFLQPEAEKSGLFAEFEAK
                     TKLETQQKIFFPYDTGSYAFIYDKEKLKNPPKSLKELVERQDLKVIYQDPRTSSVGRG
                     FLMWVNQVYGDEAPTAWKTLAKHTVTVGKGWSETYGAFLKGESDLVLSYTTSPLYHKW
                     HENTDKYVAAPFEEGHLVQVENAAIVKSSQQKALANQFLEFLHKPESQHIISYHNVMN
                     PVLTDGVDPAFAAMPTYKTIEFTPPTTETIQKWLADWSKSW"
     regulatory      complement(9257..9400)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            9684..10670
                     /locus_tag="PXD18_000927"
     CDS             9684..10670
                     /locus_tag="PXD18_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HDL6301376.1"
                     /translation="MSQLIRTLKGHIRDEIIKKGGWVNAHAHADRAFTMTPEKITVYQ
                     NANLQQKWDLVDEVKRNSSVEDYYRRFSQAIELMISQGVTAFGTFVDIDQVCEDRAII
                     AAHKAREVYKNDIILKFANQTLKGVIEPNAKKWFDIGSEMVDMIGGLPYRDELDYGKG
                     LEAMDILMDKAKSLGKMLHVHVDQFNSPKEKETEQLCDKSIEHGMQGRVVAIHGISIG
                     SHPKEYRKMLYQKMRDSQMMVIACPMAWIDSGRKEDLQPFHNALTPADELIPEGITVA
                     IGTDNICDYMVPLCEGDMWQELSLLSAGCRFTNLEEMANIASINGRKVLGLV"
     gene            complement(10724..11143)
                     /locus_tag="PXD18_000928"
     CDS             complement(10724..11143)
                     /locus_tag="PXD18_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF937 domain-containing protein"
                     /protein_id="HDL6301377.1"
                     /translation="MLGNILGSLASSVLSGNNQSTATQLIQNLLASQGGIEGLIAKFQ
                     QGGLDDVLRTWISSDEDNAPVSGEQISNVFGQENIQNVAQEAGVDAADASDLLAQFLP
                     KIVDTLTPNGNVEDLKNFDANDLLAQAAKGILGNLFK"
     gene            complement(11221..11976)
                     /gene="kdsB"
                     /locus_tag="PXD18_000929"
     CDS             complement(11221..11976)
                     /gene="kdsB"
                     /locus_tag="PXD18_000929"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HDL6301378.1"
                     /translation="MKFTVIIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQLAGASR
                     VIIATDHPEIEALAQSFGAEVCMTSEKHNSGTERLAEVIEKMQIADSEIIVNIQGDEP
                     LIPPVIVTQVAQNLDAYQVNMATLGVKLATREELFNPNAVKVVADKNGMALYFSRASI
                     PFARDSFPDCDDSFVAAQGYLRHIGIYAYRAGFVKQYVAWQPTQLEQLESLEQLRALW
                     HGEKIHIEPAKEAPQVGVDTPEDLERVRAILAR"
     gene            complement(11986..12939)
                     /gene="trxB"
                     /locus_tag="PXD18_000930"
     CDS             complement(11986..12939)
                     /gene="trxB"
                     /locus_tag="PXD18_000930"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HDL6301379.1"
                     /translation="MTTKHTKLLILGSGPAGYTAAVYAARANLNPVLVTGMQQGGQLT
                     TTDEIENWPGEFEQITGTELMNKMLKHAEKFETEIVFDHIHSVDLSKRPFTLNGDLYT
                     FTCDALIIATGASAKYLGLPSEEHFKGKGVSACATCDGFFYRNKPVAVVGGGNTAVEE
                     ALYLANLASEVHLIHRRDSFRAEKILLGRLQKRIEEGKIILHTDRTVDEVLGDNMGVT
                     GLRLKSTKEELSEEIKVDGFFVAIGHAPNTAMFEGQLELENGYIKVKSGLEGNATATS
                     VEGVFAAGDVMDHNYRQAITSAGTGCMAALDAERFLDAQEA"
     gene            13106..14176
                     /gene="dhaK"
                     /locus_tag="PXD18_000931"
     CDS             13106..14176
                     /gene="dhaK"
                     /locus_tag="PXD18_000931"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HDL6301380.1"
                     /translation="MKKLINSIETVLDEQLSGFVKAHSDLTLNTEPVYIYRTTPSNQP
                     KVALISGGGSGHEPMHAGFIGKGMLDGACPGAIFTSPTPDQMFECGLAVDRGEGVLLI
                     IKNYTGDVLNFETATELLADSGVKVATVLVDDDVAVKDSLYTAGRRGVANTVLIEKLL
                     GAAADKGYNLSELAKLGHQLNNNGHSIGIALSACTVPAAGKPSFTLAENEMEFGVGIH
                     GEPGIERRPFENLDSTVKQMFETLIAHGDYQRKIRHWNTQTQQWDEIEESKVALKKGD
                     RVIALVNNLGAVPLSELYAVYDALEKECQTFGLSIERSLVGSYCTSLDMQGISITLLK
                     VDEDILKLWDAPVNTPAMRWGE"
     gene            14197..14823
                     /gene="dhaL"
                     /locus_tag="PXD18_000932"
     CDS             14197..14823
                     /gene="dhaL"
                     /locus_tag="PXD18_000932"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase ADP-binding subunit
                     DhaL"
                     /protein_id="HDL6301381.1"
                     /translation="MTISKQQILKWLENCQQVMTEKRDYLTELDTVIGDGDHGLNMQR
                     GFSKALEKAHTVQDKDIGTLLKTVGMTLLSQVGGASGPLYGSFFIKAAQGATGKEQLS
                     FNELLALLQQGAEAIVQRGHAQVGDKTMCDLWLPLLEDLAQADSTQPIAQILLQAVEK
                     AENFANQTAPLMAKKGRASYLGERSIGHKDPGATSSYYIFKALAEALQ"
     gene            14833..15240
                     /gene="dhaM"
                     /locus_tag="PXD18_000933"
     CDS             14833..15240
                     /gene="dhaM"
                     /locus_tag="PXD18_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase
                     phosphotransferase subunit DhaM"
                     /protein_id="HDL6301382.1"
                     /translation="MVNLVIVSHSAKLAEGVGEILAQMAQGGCKIALAGGIEDTSNPI
                     GTDAVKIMQAIESVFSPDGVIVFVDLGSAILSTQTAIDLLEPELAEKVIISYAPLVEG
                     AFAAVVAASAGDSLEAVLNEANEAAALKQEQAN"
     gene            complement(15280..16125)
                     /locus_tag="PXD18_000934"
     CDS             complement(15280..16125)
                     /locus_tag="PXD18_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone YbbN"
                     /protein_id="HDL6301383.1"
                     /translation="MDYFVNVNEQNFSEVWAAAAQVPTVFHFISPREVASLEMDALLR
                     RISDENPNQFLLATVNCDEQQALAAQFRIQQIPTLYLFAGGQPIDAIQGAVSEQELRI
                     RLANILPKEEELKFQQALELLQDQRYTEALPLLKSAWEMTDKKNSDFALLYAETYIAM
                     KSVEEAREILKAIPIQDRDSRWHGLQAQIELLEQASESPELQQLQADYANSKTPEIAI
                     KLANQLHQAHKNEEALTLLFDWLKSDLNVANGEVKSQFLAILSALGTDPIVPKFRRQL
                     YSLLY"
     gene            complement(16169..16495)
                     /gene="glpE"
                     /locus_tag="PXD18_000935"
     CDS             complement(16169..16495)
                     /gene="glpE"
                     /locus_tag="PXD18_000935"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase GlpE"
                     /protein_id="HDL6301384.1"
                     /translation="METTFKEISPQQAWELIENEGAVLADVRDARRYVYSHPQDAFHL
                     TNQSYGKFLDEVDYDEPVVVICYHGVSSQSTAQFLIEQGFENVYSVKGGFEAWERNGL
                     PIETSY"
     gene            16646..17104
                     /gene="exbB"
                     /locus_tag="PXD18_000936"
     CDS             16646..17104
                     /gene="exbB"
                     /locus_tag="PXD18_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HDL6301385.1"
                     /translation="MEQLFQFLEHHTDFVILGLLGLLSVICLWKAIERIMFYSKVDIS
                     KYDTLEELDIDLTHNLTTISTIGSNAPYIGLLGTVVGILLTFYHLGQSGGDIDAASIM
                     VNLSLALKATAVGILVAIIAMVFYNGFGRKVEENKLKWLALQSKKPHQAV"
     gene            17141..17578
                     /gene="exbD"
                     /locus_tag="PXD18_000937"
     CDS             17141..17578
                     /gene="exbD"
                     /locus_tag="PXD18_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HDL6301386.1"
                     /translation="MKKFDEINIIPFIDIMLVLLAIVLVTASFISQGKIQVNVPKAST
                     TQPMKADDLAKLLTITENNEFFFNDQAITKEQLIAEVATWDKSQKVSLKVDGAVAFEK
                     FVELTDILSANEIKNVAIITKKETAPAPSSTPGSPAQVPAVAP"
     gene            17594..18505
                     /locus_tag="PXD18_000938"
     CDS             17594..18505
                     /locus_tag="PXD18_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDL6301387.1"
                     /translation="MKKKHSRIGLLASLAIHTALIGGTFAWLHNHKVEKIAEQNSLSM
                     EMVAALLEQPQVAVAPDPITEEVKEIEPEKAEVPPEPKLTPEPTPEPEAIPDPTLNPK
                     KEKPKEEKRKERHHHKHKHRHKEKREELQEQEKPKDKPKERPKHHHKHIKALERGPEI
                     KQGIVAKAIPNAAEGEKVVAGVVGGQKNGSPNSTSTTGSANTGASSGNASELAAYKVA
                     LQRALQRKANNSYPQREKMMRKTGTVTIKFTITSSGSITNVSVLNSSGNSNLDNAAVR
                     SAEGLSMPPPPAGFPPTVTVPVRFALE"
     gene            complement(18574..19455)
                     /gene="cysZ"
                     /locus_tag="PXD18_000939"
     CDS             complement(18574..19455)
                     /gene="cysZ"
                     /locus_tag="PXD18_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter CysZ"
                     /protein_id="HDL6301388.1"
                     /translation="MSSVFSEPQNQVGLGFHYFIYGWRLLLQRQFLPFVIFPILINTV
                     LMVGLIWGFFANIGGLLDMLLPSWLEWLSFVLIPLIFLMILVGFYFAFTTLANFVAAP
                     FNALLAEKVELQLTGEPLGDMSFGAMLKDVPRMLKREWQKMMYSIPRLIALFVLGFLP
                     VVGQTVAPVLTFIFGAWLIAIQYCDYPFDNHKISFQRMRNALSQSRTLNFTFGALVSL
                     FTMIPFVNLVVMPVAVCGATALWVKEYRNFFLNNQTGEFSKADYTFTKVNSTSLSTET
                     RTGEVSPNVRNGDIRKQ"
     gene            19567..20469
                     /gene="zipA"
                     /locus_tag="PXD18_000940"
     CDS             19567..20469
                     /gene="zipA"
                     /locus_tag="PXD18_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HDL6301389.1"
                     /translation="MELHIIFFILAGLLIAVLIGFSLWSARREKSNIFSNTFSTRPIA
                     VPPQNNKMSNSIPTSLQPQNEDYQAMSVPEENPQQIQQEVESSLQNIKISLPGGNPQQ
                     QPEQIQPIQSVAEPTVSTYGQKISNQQHIQYNTPDFANPMVNTVVEETPQAVAIEPQE
                     TQSAEEENPFVTLYLYAPQNEAFRGDFVVHYLEEVGLRFGEHQIFHRHQHIDDSLSPI
                     IFSAANLMNPGTFDLNNISNFATAGLVLFMQLPTEGNDVANMKLLISNAEHLAASLGG
                     FLYDDNQQPFGEESRQRYMQRVMH"
     gene            20534..22591
                     /gene="ligA"
                     /locus_tag="PXD18_000941"
     CDS             20534..22591
                     /gene="ligA"
                     /locus_tag="PXD18_000941"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDL6301390.1"
                     /translation="MSLFNQTSLFEENATPELVEKIETIRQTLRQYEYEYHVLDNPSV
                     PDAEYDRLMNELKNLEWQHPELISADSPTQRVGAKPLAGFAQVTHEIPMLSLDNAFSD
                     EDLDGFLRRMESYITASPSQLEFCCEPKLDGLAVSILYENGILTRAATRGDGTTGEEI
                     TANIRTIRNIPLKLNTTNPPARLEVRGEVFMPQSGFNELNEKALAKGEKTFANPRNAA
                     AGSLRQLDPKITRQRPLVLNAYGIGVYESDDELPATHFERLQWLKSLGIPVNNEIRLV
                     QGKAALLAYYAEIQAKRPTLGYDIDGTVLKVNDIALQEQLGFISRSSRWAIAYKFPAQ
                     EEMTILKEVDFQVGRTGAITPVAKLEPVFVAGVTVSNATLHNGDEIERLGIVIGDTVI
                     IRRAGDVIPQITGVMLERRPENAKKIEFPTACPICHSAVTRVEGEAVARCTGGLFCEA
                     QRKEALKHFVSRKAMDIDGVGEKLIEQLMARELIETPADLFKLDHTTLMRLERMGEKS
                     AQNALNSIEKAKNTTLPRFLFSLGIREVGEATALNLANHFGSLEAIRQATFEQLKEVQ
                     DVGEVVANRIVSFWQEPHNVEVVEDLIAQGVRWENVVKAEIVDNPLKDKNVVLTGTLT
                     QLTRDEAKALLQSLGCKVSGSVSSKTDYLIAGEKAGSKLAKAQELGIQILSEQQFIEL
                     TQH"
     gene            complement(22654..23922)
                     /locus_tag="PXD18_000942"
     CDS             complement(22654..23922)
                     /locus_tag="PXD18_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HDL6301391.1"
                     /translation="MTQQIEHSTWQSKFAAMGPGILMASAAVGGSHIIASTQSGAIYG
                     WQLAIIILLANLFKYPFFRFGVQYTLASGKTLLEGYKEKGKFYLIIFFILNVFAAMIN
                     TAAVAIVSAAILKFIFSALGIPLDLSIPMAGTIVIVVTWGILLLGQYKFLDTLSKWIM
                     IALTISTVSAVIIAALKGGVEIAPDFVEPSPWNLAALVFIVALMGWMPAPIEISAINS
                     MWVIAKKRLSKVNYEDGIFDFNVGYIGTAILAIVFLALGALVQYGSGEKVEQAGVAYI
                     AQLIKMYAFAIGDWSKLLIAFIAFMCMFGTTITVIDGYSRANAEALRLISGRKQHSQT
                     ELSIWMTVTALIGILIISQFMSDVAKMLQFAMISSFVSTPVFAWLNFSLVLKGEHRAK
                     GWLFWLAVIGLIYLTSFTLLFLAQQFKLIG"
BASE COUNT         7277 a         5213 c         4743 g         6779 t
ORIGIN      
        1 tattagtttc aggatcatgt taatcatttc aaggtggaaa cgcttgtttt tagattagat
       61 aaaaaataag gagggtcgaa atagcgggta tacagaaagt gcttatagcc aaaaaatagt
      121 ctattgttat tgaatacaag cggtctattt tgtcacattt ttgccaaatt tggttaaaaa
      181 accaaccgct tgtaatctta actgaagata gatagttttt tattttttct acaactctac
      241 agggctggat ttattgcaga atggtacttg ccactaacta tcatcactcc caggataatt
      301 tatagaaaca atacgagaaa ttgtgttaat aaatgaaatg aataacgtta atccgataat
      361 ggtgggaaac cacctaaatc ttttaaacga ttgaccattg cacagaaaag ttctgccgtg
      421 cgctcggtat catacaacgc agaatgcgct tgcttaccgt caaacgggat ttttgccacc
      481 tggcaggctt ttaccaacac ggtttgccca tacataaaac cggcaagggt ggcggtgtca
      541 aacatcgcga aagggtgaaa gggatctcgc ttggcattaa ttcgtttaat cgcagcctgt
      601 aaaaagccct gatcgaacgc tgcattgtgg gcaacaatca ccgcccgttg gcagccttgc
      661 tccttcattg ctttgcgaac cattttgaac atttccggaa tcgcaatatt ctccgcaacc
      721 gctcctctta gagggttgtc aatatcaatg ccgttgaatt ttaatgactc agggttaata
      781 ttcgcccctt caaatggcgc aatatgaaaa tggcattgtt gatccggcac tagataacct
      841 tgctcgtcca tttttaaagt aattgccgcc aattccaata aggcatcagt ttgggcattt
      901 aagcctgctg tttccacatc aatcacaacc ggtaaatagc cacgaaaacg atgctttaat
      961 aatttataat ctatttgttc cgttgtctgt tccatttatc tatcaaccta aaatacaagc
     1021 ggtctgattt gcaaaatttt ttacaaatcc gaccgcttga atattcatat tcgcaaaaat
     1081 tagtttccta acgctgcttt cgcatcttta ttctcaataa attcgatttt ataaccgtcc
     1141 ggatcttcag caaaggcaat cacagttgtt ccacccaata ccgggcccgg ctcacgggta
     1201 attttaccgc ctgccgcacg cacatcttca atggttttgt aaatatcatc tacgcctaac
     1261 gcaatatggc cataagccgt gcctagctca tatttatcca caccccagtt ataagtcagc
     1321 tcaatcaccg cactttcgct ttcatcggca tagcctaaaa atgctaacga atacttatac
     1381 tgctcgttct cgcttctacg taacagacgc atacctaaca catcggtata aaacttaatt
     1441 gagcgctcta aatctccaac tcgtaacatt gtatgtaaaa ttcgcatatt ttcttccccc
     1501 tgaagttaaa aaacgacccc tattatggca taatcttggc ttaaaatcat tttctttata
     1561 ccttttggga ttatctatgg ctcacgatca cgattcgccg tcaaaacttg aaatttcaac
     1621 ccacgctgca ctgccaatgg tattaatgct gtttattgaa atggctctta acttctactc
     1681 tgcaccgaaa aattcaattt ttatttctcc ttacttattg gcgtttttcg tgacctcatt
     1741 aatcagtttt ttagtgctat ggaaaggcga aatctgccga gggcaagcca gccgtttaag
     1801 ctttatttta ccctttttac ttattttcgc cgtagggaat ttcctttatt ccataggctt
     1861 tacgccaaag cataacccaa tggcggtggc aagcattgct gcagtttttg cctgcttaat
     1921 ctacttccgc ctgccggaag atcaaacctt atataacaca ttgatgtatt gtggtttggc
     1981 tatatcaagt attggtatta tccaatattt agccatttat tggtttgaac tgccttcatt
     2041 gtttaacggg attcgagcca acaatttcgc ccaagtgctg ttaggcattt tattagccgg
     2101 ctggtattta atgttagcga aaagccgttt agatgttttc ctcaaactgt tggtgaaaac
     2161 cgcccttgtg gtgctgattc tcaattattg ctggacagct tttgtgcttt atcaacatct
     2221 acaaattatg ccggatatgc cattgctttc atttatcatc tattttgcag cacaatttgt
     2281 gattttattg atgttggcgt ggttattact tggaaaaaac atcaaaaatc cgaccgcttg
     2341 gacagttgct acgctgttag cgattttata ccctttcgct aatgtagtct gatttatgaa
     2401 acgggcatta aaatttttcg gcattgcaac cgttctatct gttgtggcaa tctactattt
     2461 tttaatgccc agccactatc ttgccacgcc gattaactgg attttgccga aagcgtggaa
     2521 agttcaactc ccacaaggct taaacctgaa ttggcaaggc tcatcacttg ctcaatttca
     2581 actctcttat cgagattgcc cgctactaag tgccgataaa accgatttgg gttggattga
     2641 gaaaaaccat ctttctgtcg ataaattgga tattgattac cgctgccttg ccttgtttcc
     2701 acaaaatgaa cacagcaatt ccgacacttc actcaacgca ttgctggcgg tcattcctga
     2761 tggcgaagcg actatccacg cccttaactg gaaaaatttg cctaccgatt tcaacccaag
     2821 acttcagcgg ctttttgagc aaacagctat taaactctca ctttcaaaag gtgaaattca
     2881 ggcaactgcc gctcaacaag cggtcaaatt tgcagcaaat tttgcaaatg ggcggttgaa
     2941 tgccgattta tcatatcaac cgaatgaaaa agaacagcat aatcttagga tttcagcaga
     3001 aattgaggac aattttaccc aactgccgcc cactatttcc gctgaatatg attggcaatt
     3061 atcttatgaa atcatcgcca ataaagcctt gcaaaagggc gctctattct cagttggcaa
     3121 aaaaatgccg cacaaaagtt agaaggcaac tggcaggttg aacttgccga aagtgaaaat
     3181 aacaaactgg atttcccttt tctgtttgat ggggaaagcc tagaaattca acaagggcgg
     3241 tttgattggc actttaccca acaatttcca ctgcaagggt ttgttagcac caagctcaca
     3301 ccgaaatcat tcaaccaaaa cggctttttg ccactcaaaa cggcgattcg tatcagcctg
     3361 ctttcccaaa acagttgggg taaaggcaat attgtaatct ccaattcaga cggagaaata
     3421 accgaaaaag ggctgaattt accgcttcgt ttgacgggta atatcaaaca cggcaatttt
     3481 attctttaca gtagcgtgcc actggatttt caaggtaatt ttgacgattt aagcgtaaaa
     3541 tttttgccta gctccctact tcgtttgacc ggaaaagagc ggtatttaac cattgaagat
     3601 ttacgttttc cacttgccgg aattaaaatt gacaagcacg gtattcacgg acgactgcac
     3661 gcaattttaa gagggcaaag ccctgatttt aacaatatcg agttccattt agacggacaa
     3721 gcacaaaatt ttaaggctgg agccttagat tttttccaag atcctaaaga tgctaacgca
     3781 gtaaaagaca gttggaaatg gcgaatttgg ggagcatcta tcctcaaagc cttcaacagt
     3841 aaagtgaatt taagcggcag agggcaatgg cataaacagc ttgtgcggtt ggaagaactc
     3901 aaaggcgatt tagccaccgt aaagttagca gatacaacca tttctaaaat cacgcttaac
     3961 aatacgcaag ctattcgatt taatgtcaaa aaattcaccc ttgacggagc ggtaatgttg
     4021 caatcacctg agattgcctt cagttatggc ggtgtgctac ccaaaccacg agtgaatctc
     4081 gcctttgatg gtgaagtcga aaaactacgt tttaaaggag cggtgaatac caccgaactc
     4141 ggcccactca aactgttcgc ccgccgccaa ttaagccaag atgccagcca aattatcggc
     4201 aaactttatt ggccggagca atctgctcaa ggcttccagc cgctttttcc gtttcgtagc
     4261 caatgggtga tcaacaacgg tacaattcgg ggcgaaacgg cgtttagtgc cggcagtaaa
     4321 aacgggctga ttgccggtgg gcatttagcc attcgtaacg gcggtttatc tttacctaat
     4381 ggcgaagcaa aagggattga attttcgctt ccctaccgct accaaaacgg acgctttcat
     4441 ttcggagcca aaaaaccgct tgatgtaaaa attgcccaaa tcaaactggg ggatttagca
     4501 ttagataacg cttcaatgaa actcaacggt tactaccctt ataccaaagc taagccattg
     4561 aatttaaatc aattatcctt tgatttgttt ggcggtaaac tgaatgtaaa acgctttgcc
     4621 ttaccacaaa ccgaactggc ttacctgaat ttagagcgga ttgactttga gcaaattttg
     4681 caatttatgc aatatcagca aattgatctc aaaggcaaag ccaacgctat cttgccgttt
     4741 tggttaagcg gaaaaccttg ctatatttgc gatggcttac tgacacaggc ggaaacttcc
     4801 tatttaacct ttacccctga attgttgtca gaaatgcaga aaagtggtta caccgagcaa
     4861 attttgttac atttagtaga taaaagcacg attaacgatt ttcgcagtct gattaatgtc
     4921 gggccgaaag gcgatttagt attagacgga aaattaaaat tatcttccaa tcaaaataaa
     4981 tcaaaagtga atttaaacta taatcaccga gaaaatctgt ttgatttgtg gcacttaatt
     5041 aactatggct cacaatttga acaaaaatta gaaaattacc tctatcaaaa actggaacga
     5101 tgataaagaa tggaataaat atgaaaccgg ccacatttta ttttgcaata tttttactga
     5161 atttgaccgc ttgtacgccg aaagtacagc ttgaaacgcc aagtgaaggc attacgatta
     5221 atatgaatgt ggtcgttgat caccgcattg atgtgaagat ggacgagaaa tcccgagcgg
     5281 tgatcaccaa aagtgagaac aaaacgaaaa attagctgaa gataatcatt tgatgatctt
     5341 taaattgtgc ataaatatcg gctaattttt cccctgtcgg tagtactaaa tcaggcgtta
     5401 aatcaaacat cggcacaatc acaaattccc gatttttcat ctcgatatgc ggcacgttca
     5461 aacgctcggt ttgaatttgc tgattgccgt acaaaataat atccagatct aaagttctct
     5521 ccccccaacg gcgtacacgc actcttccct gctcattttc aatgctttgc aatttatcca
     5581 gcaatgcagt gggcgatagg tcggtactaa attttgctac cgcattgaca taatcaggct
     5641 gatcttgcgg tccgacaggc tttgagccgt agaacgggct gatttcaaac tcatttgcaa
     5701 atttttttaa tttttcgacc gcttgtttaa gctgctcaag cggattctca aggtttgatc
     5761 ctaaggcgat atagacggtt tgcataaaat atacttacaa atataacaat aaactctctc
     5821 cccttgtggg agagagaccg cttatgagcg ttcagcgaaa taagcagaga gaggggacaa
     5881 gcggtaactt ttattaaatt ttttacacat ttcccctctc cctgattttt cttctgaacg
     5941 aagaaaaatc gctccctctc ccacaagggg agagggaaat atattaatta tccatttact
     6001 ttcggttttt tcttaaaggt tctacggcgg cgtgttttct ttttctcgct aggcacattg
     6061 cctaaatgac gaaccgattt cagcaattca gtacgctgac cttcattgct aaattggtat
     6121 tcgtgccacc aagcggaaag ttcgaccaaa tcgccgcctt caatttctgc acgcatcact
     6181 aataaatcaa accctgcacg gaatttgacg tgttcaaggg tttgttgcgg tcggttgcca
     6241 cttcgtttca tcatctgaaa ttgcaatgcc caaatatctc gaatgactga agtgtgtctg
     6301 cggtgcaacg caatcgcgtt gcaactttcc gccagcacat catttgctgc cagcatcatt
     6361 gcatcgtagc tgttgaagcc accttcgttt ttaagctgct ccattttctc ccggagcgga
     6421 taccaaagta gtgcagcaaa taaaaacgca ggatttaccg gtaatttatc ggcaattcgc
     6481 tcatcagttg aatttaacgc tttggtaatc attctttcgg cataggaatc acctttggca
     6541 gtaaaaaatg ccggcaatac cggaaacaag aattgccata gttcatattc acgcaaaagc
     6601 tgataagttt tcagccctgc accggtttgt aataatttga gtgattcgtc aaacaaacgg
     6661 gctgccggaa tgttggttaa caacaccgcc atatcccgaa ttggggaggc cgtggcttta
     6721 tccaagaaca tatccaactt cgccataaaa cgaacggctc gcaacattct caccggatct
     6781 tcttggtaac gaatagtagg ctctccgata agcgaaagtt tacctgctcg taagtcttca
     6841 ataccgttga agaaatcaaa aataagattg cgttttatat cgtaatataa ggcgtttacg
     6901 gtgaaatcac ggcgctctgc atcttcacgg agcgtgccgt aaacattatc acgcagtagc
     6961 attccttcat cgctgacttt agaaattttg tcattgcgat gagattcgtg tcctgcacgg
     7021 aaagtcgcca cttcaaaaat ttcacgcccg taaacaatgt gtgccaaacg gaaacgacgt
     7081 ccgattaatc ggcattgcct accaaaaata cgctgaattt cttcaggtct cgcattagtc
     7141 gcaatatcga aatctttagg ctttttctcc aagagtagat ctcgaataca gccacccaca
     7201 atataagctt cataaccggc aatctgcaat ttatcgacaa tcgaaatcgc atttttagga
     7261 aaatccttcg ggctaattct atattggctg gcattcaccg caaatttctt gtgtaacaaa
     7321 tgggagggag gattatcttg ttgtttcttc ccacctctat aagtcttttg gtccgttaag
     7381 ttcggggctg ggcgtttaga acgggaagtt ttgggttctc tttccgctct tttttcactc
     7441 tctacctttt catttttctg agccgacttt ttaggcttgg aaaataatga tttaatataa
     7501 ttaaaaataa tacacctcta aatagtaaat gcctcttaaa aaagaggcac cctgtaaagt
     7561 tgattataag cctagctgct tttctcgaat ttcagctaaa gttttacagt caatacataa
     7621 atcagctgtt gggcgtgctt ctaaacgttt aatcccaatt tctacgccac aggtttcgca
     7681 ataaccatat tcatcttctt ggattttata caaggtttgc tcaatttttt tcaataattt
     7741 gcgttcacga tcacggttac gaagctctaa actgaactct tcttcttgac tggctcggtc
     7801 gttcggatcg gcaaagttag tcatatcttc ttgaagctgg cttttggtac gctccgcttc
     7861 ttccataatt tgactgtgcc acgctttcag aattttggtg aaatgctcac gttgagcttc
     7921 attcatatat tcttcgtctt ttttaagctc ataaggctca acgcctgcta atgctaataa
     7981 accgagtgag gttttagccg cttgagtcat agatatttac tccttgttcc ctgtttattg
     8041 gaagttttat tgttaaaatt attgcccgaa tacagactaa cttccttgta accgcactat
     8101 acgaaaaaat caacatcttc gggttttaaa taatggcggc tataaataac acaaaaacga
     8161 ctcattaatc aaatgaattt gcaaaaattt tgcattcaaa ttgatttgat tgcacaaaaa
     8221 aatagccgaa catccattcg gctatttttc aaacactttt taccagctct ttgaccaatc
     8281 ggctaaccat ttttggatag tttcagtagt cggtggcgta aattcaatgg ttttataggt
     8341 tggcattgcc gcaaaagccg gatcaacgcc gtcggttaaa accggattca ttacgttgtg
     8401 gtaagaaata atatgttgcg attccggttt gtgcaaaaat tcaagaaatt gatttgccaa
     8461 tgctttttgt tggctgcttt tgacaatagc cgcattttct acttgcacca aatgcccttc
     8521 ctcaaacgga gcagccacat atttatcggt gttttcgtgc cacttatgat ataaaggcga
     8581 tgtagtatag cttagtacca aatccgactc gccttttaag aacgctccat aagtttcaga
     8641 ccaacctttg cctaccgtta ccgtatgttt tgccaatgtt ttccaagcag ttggagcttc
     8701 atcgccatac acttgattta cccacattaa gaagccccgc ccaacgctgc tggtacgtgg
     8761 gtcttggtaa atcactttta aatcttggcg ttccaccaac tcttttaaac tttttggtgg
     8821 atttttcagc ttctctttat cgtaaataaa agcataagaa cccgtgtcat aagggaagaa
     8881 aattttctgt tgggtttcta atttggtctt tgcttcaaac tcggcaaaca agccactttt
     8941 ttcggcttca ggttgcagga aattatcaat accgaccacc acatcagctt tggtttttgc
     9001 tccctccaaa cgcaagcggt tgaacatcgt tacgctatcg tcaagcggaa caaatttgac
     9061 atcacagcca cactctttct caaaattctg ctctaattta ggagcaggtc catattccga
     9121 agcaaacgag ctgtaagtgt aaacggttaa ggtcggttga ttggcataaa cacttgcact
     9181 taataacgca agtgaagaga ggataaattt cataacaatt ccttctaaat taaatgaata
     9241 gaaggattta agaaaggcaa gttgctatct caaatcccta cgctgatatt aatcagatca
     9301 ggttctatgg gtatttctca gccacaagcg gttaaatttc ggcaaaaatt tgcaaatttt
     9361 tacgcaaaaa caaccgcttg ttgcacccca atgagaacgg cttcattgta aaaagtttgc
     9421 aggcagattt caaccaaagc aaacgtttgc tatttgtatt aaaaatccgt atactaccgc
     9481 cctagtccaa acaaggaact agaaatgaat tgcacaacat cggttaaatc aaattcccaa
     9541 cagctacgct tcaactttag aggcgtagct gtttttctat tcatttcaaa ccattcaaaa
     9601 tcgctgttat agcgattttt tttcgcacgc ttgcaattac cgcaagcggt tgagccacat
     9661 taacagagag aaaaggaata aaaatgagcc aattgattcg taccctaaaa ggacatattc
     9721 gtgatgaaat catcaaaaaa ggcggttggg taaatgcaca cgcccacgca gatcgtgcat
     9781 ttacgatgac gcctgaaaaa atcaccgttt accaaaatgc gaatctacag caaaaatggg
     9841 atttggtcga tgaggtaaaa cgtaattcaa gcgtagaaga ttactaccgc cgcttttccc
     9901 aagcgattga attgatgatt tcacaagggg taacggcatt tggtactttt gtggatatcg
     9961 accaagtatg tgaagacaga gccattattg ccgctcacaa agcccgtgaa gtatataaaa
    10021 acgacatcat cttgaaattt gctaaccaaa cgttgaaagg cgtgattgaa cccaatgcga
    10081 aaaagtggtt cgatatcggc tcggaaatgg tggatatgat tggtggcttg ccttaccgtg
    10141 acgaactgga ttacggcaaa ggcttggaag caatggatat tttaatggat aaagccaaat
    10201 cgctcggcaa aatgctccac gtccacgttg atcaatttaa ctcacctaaa gaaaaagaga
    10261 ccgaacaact gtgtgataaa tcgattgagc atggtatgca agggcgagtg gttgccattc
    10321 acgggatttc catcggctcg cacccgaaag aatatcgaaa aatgctttac caaaaaatgc
    10381 gtgatagcca aatgatggtc attgcctgtc cgatggcgtg gattgatagc ggacgtaagg
    10441 aagatttaca accgttccat aacgctttaa cccctgctga tgaactcatt cctgaaggca
    10501 ttactgttgc tatcggcaca gataatatct gtgattatat ggtaccgctt tgcgagggcg
    10561 atatgtggca agaactcagc cttttatcag caggctgtcg ttttactaac ctagaagaaa
    10621 tggcaaatat tgccagtatc aatggtcgaa aagtactggg tttagtctaa ctgaataaac
    10681 gaaaggcgaa ccctaggttc gcctttaata acagcataac cgattattta aacaagttac
    10741 ccaaaatccc ttttgccgct tgagctaata agtcatttgc atcaaagttt tttaagtctt
    10801 caacattacc attcggggtt aaagtatcca cgatttttgg caagaactgg gctaataaat
    10861 cgctcgcatc agcagcatca acacccgctt cttgagccac attttgaatg ttttcttgcc
    10921 cgaacacatt actgatttgt tcgcccgaaa caggtgcatt gtcttcatcg ctgctgatcc
    10981 aagtgcgtaa cacatcatct aatccgcctt gttggaattt ggcaatcagc ccttcaatcc
    11041 caccttgtga ggcgagtaaa ttttgaatta attgagttgc agttgattgg ttattgccac
    11101 tcaatactga agaagccaat gaacctaaaa tatttcctaa cataatttct cctatgcaag
    11161 cggtacaatt ttgcgaaaat tttgcaaaaa aacagcaaac ttcgaccgct tgtaatcact
    11221 ttaacgagct aaaatggctc gcactctttc caaatcttcc ggcgtatcca cccccacttg
    11281 cggggcttct ttcgccggtt cgatatgaat tttttcaccg tgccataagg ctcttagttg
    11341 ctcaagggac tcaagctgtt ctaattgtgt cggctgccac gccacatatt gtttcacaaa
    11401 accggctcgg taagcgtaaa tgccgatatg gcgtaaataa ccttgagcgg caacaaaact
    11461 gtcatcacaa tccggaaaac tgtctctggc aaacggaatg ctggctcggg aaaaataaag
    11521 tgccattccg tttttgtctg ccaccacttt caccgcattt gggttaaata gctcttctcg
    11581 ggtcgctaat ttcacaccga gtgttgccat attgacttga taagcatcta aattttgagc
    11641 tacctgagta acaattaccg gtggaatcag cggttcatca ccctgaatat tcacaataat
    11701 ttcgctgtcg gcaatctgca ttttttcgat cacttccgcc aaacgctcag tgccggaatt
    11761 gtgtttttcc gaagtcatac agacttccgc cccaaaagat tgagcgaggg cttcaatttc
    11821 agggtgatcg gtggcaataa tcacacggct tgcaccggca agctgagctt tttcccaaac
    11881 gtgttgaatc atcggtttgc ctgcaatatc caacaacggc ttacgaggca aacggctgga
    11941 agcgtaacga gcaggaataa ttacagtgaa tttcataggc tatccttatg cttcttgagc
    12001 atctaagaaa cgttctgcat ccagggctgc catacaacct gtgccggcag aggtaatcgc
    12061 ttggcgatag ttatgatcca tcacatcacc ggcagcaaat acgccttcca cagaagtggc
    12121 agtagcattg ccttccaaac ctgatttcac tttaatgtag ccgttttcaa gttctaattg
    12181 accttcaaac attgccgtat tcggtgcgtg cccaatcgcc acaaagaaac catcaacctt
    12241 aatttcttcg ctcaattctt ctttggttga ttttaaacgt aagccggtaa cgcccatatt
    12301 atcgcctaac acctcatcaa ccgtacggtc tgtgtgcaga ataattttgc cttcttcaat
    12361 acgtttttgc agacgaccaa gcaagatttt ttcagcacgg aagctatcac ggcggtgaat
    12421 taaatgcact tcacttgcca aatttgccaa ataaagtgct tcttccacag cagtattccc
    12481 accaccgact accgcaaccg gtttattgcg atagaagaaa ccatcacaag ttgcacaagc
    12541 cgacacgcct ttgcctttga aatgctcttc agaaggcaaa cctaaatatt tcgccgacgc
    12601 accggtggca ataattaacg catcacaggt gaaagtgtat aaatctccgt ttagcgtgaa
    12661 tgggcgttta gataaatcca ctgaatgaat atgatcaaac acgatttcag tttcaaattt
    12721 ttcagcgtgc ttgagcattt tgttcattaa ctctgtgccg gtaatttgtt caaattcccc
    12781 cggccagttc tcgatttcat cggttgtagt gagctgtccg ccttgttgca taccggtgac
    12841 taaaaccggg tttagattgg cacgggcggc ataaacagca gcggtataac cggcaggccc
    12901 tgagcctaaa attaaaagtt tggtgtgttt agtggtcata atgaatcctc tgaataaata
    12961 ttaatgttta ttttagccta aatttcagtt caactctatt ttcgttttcg ctcaactttt
    13021 ttcaattttg tgacaaagtt aacagaaatc cgactgtgtt tcttgtaaat tgtgacagtc
    13081 taattcattt aaaaggggca aaaagatgaa aaaattaatt aattcaatag aaaccgtctt
    13141 agatgagcaa ctttctggtt ttgtgaaagc acattctgat ttaacactta acacagaacc
    13201 tgtctatatt taccgcacaa cgccaagtaa tcaacctaaa gtagccctta tttccggtgg
    13261 tgggagtggg cacgagccaa tgcacgccgg ttttatcggt aaaggaatgt tagacggagc
    13321 ttgccccgga gcaatcttta catctccaac gccggatcaa atgtttgaat gcggtttagc
    13381 ggttgatcgt ggcgagggtg tattgctaat tattaaaaac tataccggtg atgtgctgaa
    13441 ttttgaaaca gccaccgagc tacttgcaga tagcggtgta aaagtcgcaa ccgtgttggt
    13501 tgatgatgat gtggcagtca aagacagttt atatactgcc ggccgccgcg gtgttgcaaa
    13561 tacagtatta attgaaaagc tgttaggagc tgcagcggat aaaggctata acttatccga
    13621 attagccaaa ttagggcatc agttaaacaa taacgggcat tctatcggaa ttgccttatc
    13681 tgcttgtact gtgccggctg ccggtaagcc atcatttact ttagctgaaa atgagatgga
    13741 atttggggta ggtattcacg gagaaccggg cattgaacgt cgcccctttg aaaatctgga
    13801 tagtaccgtg aaacaaatgt ttgagacctt aattgctcac ggcgattatc aacgtaaaat
    13861 tcgccattgg aatacacaaa cccaacaatg ggacgaaatc gaagaaagca aagtggcatt
    13921 gaaaaaaggt gatcgtgtta ttgctttagt taataactta ggagcagtgc cactatccga
    13981 actttatgct gtttatgatg cgttagaaaa agagtgccaa actttcggct taagcattga
    14041 acgcagtctt gttggatcat attgcacctc gctggacatg caaggtatct ctatcacatt
    14101 actgaaagtt gatgaggata ttctcaaact atgggatgct ccggtaaata caccggcaat
    14161 gcgttggggt gaataattag attgaaagga taagttatga caatatcaaa acaacagatc
    14221 ttaaaatggc ttgaaaattg ccaacaggta atgactgaaa aacgggatta tttaaccgaa
    14281 ttggataccg ttattggcga tggcgatcac ggtttaaata tgcagcgtgg atttagtaaa
    14341 gcacttgaaa aagcccatac cgtgcaagat aaagatatcg gcaccctgct taaaaccgtt
    14401 ggaatgacat tattatcgca agtaggggga gcgagcggcc ctctctatgg ttcatttttt
    14461 attaaagcgg ctcaaggtgc tacaggcaaa gagcaactga gctttaacga gttactggca
    14521 cttctacagc aaggagcaga agctatcgta caacgtggac acgcacaagt tggcgataaa
    14581 acgatgtgtg atttatggct gccattactc gaagacttag ctcaagccga tagcactcaa
    14641 ccaattgctc aaatcttatt acaagcggtc gaaaaagcag aaaattttgc aaatcaaacc
    14701 gctccattaa tggcgaaaaa agggcgtgcc agttacttgg gcgaacgcag tatcgggcat
    14761 aaagatccgg gagcaacgtc cagctactat atttttaaag ccttagctga agcattacag
    14821 taggaggggt aaatggttaa tttagtgatt gtttcacata gtgctaaact ggcggaaggc
    14881 gtgggggaaa ttttggctca aatggcacag gggggctgta aaatcgccct tgccggcggc
    14941 attgaggata cctcaaatcc tatcggcact gatgcggtaa aaataatgca agcgattgaa
    15001 tcggtattta gcccagacgg tgtgattgtg tttgtcgatt taggcagtgc aattttaagt
    15061 acccaaaccg ccatagattt actggagccg gaacttgccg aaaaagtgat cattagctac
    15121 gctcctttag ttgaaggtgc ttttgctgct gtagttgcag cctctgccgg cgatagttta
    15181 gaagcggtat taaatgaagc gaacgaagcc gctgctctta agcaggaaca agccaattag
    15241 taaaaatgcc gtatcgaaaa atacggcatt ttagttttat tagtacaata gtgaataaag
    15301 ctgtcttcta aatttcggca caatcgggtc tgtacccagt gcagataaga ttgccagaaa
    15361 ttggcttttt acctcgccgt tcgctacatt taaatccgat tttaaccaat caaaaagtaa
    15421 cgtgagtgct tcttcatttt tatgagcttg gtgtagctga tttgccaatt taatcgcaat
    15481 ttcaggggtt ttgctgttcg cataatccgc ttgaagctgt tgtaattcgg gcgattcgct
    15541 ggcttgttcc aataattcga tttgggcttg caaaccgtgc caacggctgt ctctgtcttg
    15601 aatcgggatc gctttaagga tttcacgagc ctcttccacg cttttcattg caatgtaagt
    15661 ttcggcatag agcaaagcga aatcgctgtt tttcttatcg gtcatttccc acgctgattt
    15721 cagcagcggc aaggcttcgg tataacgctg atcttgcaat aattccaagg cttgttgaaa
    15781 tttcagctct tcctctttcg gtaaaatatt tgccaaccga atccgtaatt cctgctcact
    15841 tactgcacct tgaattgcat caatcggctg accgccggca aacaaataga gcgttggaat
    15901 ttgttgaatg cgaaattgag cagccaatgc ttgttgctca tcacaattta ccgtcgccaa
    15961 taaaaattgg ttagggtttt catccgaaat acgacgtagt aaggcatcca tttccaatga
    16021 agccacttcc cttggcgaaa taaaatgaaa caccgtcggc acttgtgccg ctgctgccca
    16081 tacttcacta aaattctgct cgtttacatt tacaaagtag tccatacaaa accttcttaa
    16141 gctaaaaatt actttttata ttgtagcatt aataagaagt ttcaataggt agcccgtttc
    16201 tctcccacgc ttcaaaacca ccttttacac tataaacatt ctcaaaccct tgttcgatta
    16261 aaaactgtgc tgtactttgg ctactcactc cgtgatagca aatcacaacc accggttcgt
    16321 cataatcgac ctcgtctaaa aacttaccat aactctggtt ggttaaatga aacgcatcct
    16381 gtgggtggct gtaaacataa cggcgggcat cacgcacatc ggcaagcacc gcaccttcgt
    16441 tttcgattaa ttcccaagcc tgttgcgggc taatttcttt aaatgtagtt tccataatca
    16501 ctttccctca aaaaacgtgc aactatacca taaaattcta aaaagaatgg ctattattcc
    16561 aagttgaaaa tttgatgttt gtcagatata attgcaaact attttcaaat gcactgattt
    16621 aaaactacca cagtttgagg attttatgga gcaattattt caatttttag aacatcatac
    16681 tgactttgtt atattaggat tactaggctt attaagcgta atctgccttt ggaaagctat
    16741 tgaacgtatt atgttttatt ccaaagtaga tatttcaaaa tacgataccc tcgaagaatt
    16801 agacatcgat ttaacccaca atttaactac catttcgact atcggctcta atgcccctta
    16861 tatcggctta ttaggaaccg ttgtcggtat tcttttaact ttctatcatt taggtcaatc
    16921 aggtggtgat attgatgcgg cctctattat ggtaaacctt tctttagctc taaaagccac
    16981 tgctgtcggt atcttagtgg caattattgc aatggttttc tacaatggtt ttggtcgtaa
    17041 agtggaagaa aacaaactga aatggttggc attacaatca aaaaagcctc atcaagcggt
    17101 gtgatttagt ccattttttg caaattaata aggcagaaca atgaaaaaat tcgatgaaat
    17161 caacatcatt ccatttattg atattatgtt ggtattactg gctatcgtgt tagttaccgc
    17221 ctctttcatt tctcagggta aaatccaagt aaatgtaccg aaagcaagta caacacagcc
    17281 aatgaaagca gacgatttag cgaagctttt aaccattacc gaaaataatg agtttttctt
    17341 taatgatcaa gcaataacta aagagcaatt aattgctgaa gttgccactt gggataaaag
    17401 ccaaaaagtg tcactcaaag ttgatggtgc agtcgccttc gaaaaatttg tggaattaac
    17461 cgatatcctt tctgcaaatg aaattaaaaa tgtagcaatc attactaaaa aagaaactgc
    17521 tccagcacct tcaagcacac ctggtagccc tgcacaagtg ccagcagtcg caccttaaat
    17581 agggtaaaca ggtatgaaaa aaaaacattc tcgtatcggc ttattggcat ctttggctat
    17641 tcacactgcc ttaattggtg gcacttttgc ttggttacat aaccacaaag tggaaaaaat
    17701 tgccgagcaa aactctcttt ctatggaaat ggtggcagca ttattagagc aacctcaggt
    17761 tgccgttgct ccggatccta ttaccgaaga ggtcaaagaa atcgaaccgg agaaggcaga
    17821 agtaccacct gaacctaagc ttactccgga gccaactcca gagccggagg caattccaga
    17881 tcctacgcta aatccgaaaa aggaaaaacc gaaagaagaa aagcgtaaag agcgacacca
    17941 ccataaacat aagcatcgtc acaaagagaa aagggaagag ctacaagagc aagaaaaacc
    18001 gaaagataag cctaaagagc gcccgaaaca tcatcacaag catattaaag cattagagcg
    18061 cgggccagag ataaaacaag gtattgtcgc taaagcgatt ccaaatgcgg ctgaaggtga
    18121 aaaagtggtt gcgggggttg ttggagggca aaaaaacggt tcaccaaatt caacctcaac
    18181 tacaggttca gcaaatactg gggctagcag tggtaatgcc agtgaacttg ctgcttataa
    18241 agtcgcatta cagcgagcat tacagcgtaa ggcgaataac tcttaccctc agcgtgaaaa
    18301 aatgatgcgg aaaaccggta cagttacgat taaatttacc attacatcgt ccggttcaat
    18361 tacaaatgta tccgtactca attcatcggg aaatagtaat ttagataacg ctgcggtacg
    18421 cagtgcagaa ggtttgagta tgcctccgcc accggcaggc ttccctccta cggtaacagt
    18481 accggtaaga tttgcccttg aataaaaaca gccctcaaaa gcaatgtact tttgagggct
    18541 ttttattgca aaaaattgac taaaaatgac cgcttactgc ttgcgaatat cgccatttct
    18601 cacattcgga ctcacttcac ccgtacgagt ttctgtgctt aacgaggtag aatttacttt
    18661 cgtaaaagta taatccgctt tgctgaattc acctgtttga ttatttaaga agaaattgcg
    18721 gtactctttt acccataatg ccgttgcgcc acaaactgcc acaggcataa ctactaaatt
    18781 cacaaatgga atcatcgtga ataggctcac taaagcacca aaggtaaaat ttaaagtgcg
    18841 agactgcgac aacgcatttc gcatacgctg aaaactgatt ttatggttat caaacggata
    18901 gtcacaatat tgaatggcga tcaaccaagc accgaagata aaagtcagca caggtgctac
    18961 ggtttgccca accacaggca aaaagcctaa tacaaaaaga gcaatcagcc ttggaatgct
    19021 atacatcatt ttttgccatt ctcgtttcag cattcgaggc acatctttta acattgcacc
    19081 gaatgacata tcgcccaaag gctcgccggt aagttgcagt tcgacttttt ctgctaataa
    19141 cgcattaaag ggagcagcaa caaagttagc caaggtagta aaagcaaaat aaaatcccac
    19201 taatatcatc aaaaaaatca gtggaatcag tacaaagcta agccattcca gccagcttgg
    19261 cagtaacata tccaacaagc caccgatatt ggcaaaaaat ccccaaatca gccctaccat
    19321 cagcacggta ttaataagaa ttgggaaaat cacaaaaggc aaaaattgac gttgtaacaa
    19381 taaccgccag ccatatataa aataatgaaa gcctaatccg acttgatttt gcggctcaga
    19441 aaaaactgaa gacataatga ttccttattt tctatcaaaa ttaattagaa atatggtaag
    19501 ctacgcacat tattttcgca aatatgaaaa tacatttttt attgattatt tgataaagag
    19561 gacacaatgg aactgcatat tatttttttt attcttgccg ggctactgat tgctgtacta
    19621 attggattta gcctttggtc cgctcgtcgt gaaaaatcaa atattttttc aaatacattc
    19681 tcgaccagac ctattgctgt gccaccacag aataataaaa tgagcaatag catcccaacc
    19741 tcattacagc cacaaaatga ggattatcaa gcaatgtctg tgccggaaga aaatccgcaa
    19801 cagatacaac aggaagttga aagctcgctg caaaatatca aaatcagttt gccgggcgga
    19861 aatcctcagc aacagcctga gcaaattcag ccgatacaat cggtagcaga accaacggtt
    19921 agcacttacg gtcagaaaat ttctaatcag caacatatcc aatacaatac gccggatttt
    19981 gcaaacccaa tggtgaacac agtggtggaa gaaacacctc aagcagtagc tatcgaacct
    20041 caagaaaccc aatcggcaga ggaagaaaat ccatttgtaa ccctctatct ttacgcacca
    20101 caaaatgaag ctttccgcgg tgattttgta gtacattatt tagaagaagt tggcttacgt
    20161 tttggcgaac accaaatttt ccaccgccat caacatattg atgattcatt aagtccgatt
    20221 attttcagtg cagcaaattt aatgaaccca ggaacctttg atttaaataa tatctcaaac
    20281 tttgcgacag ctggtttagt gctatttatg caacttccaa ccgaaggcaa tgatgtggct
    20341 aatatgaagt tgttaatcag taacgctgaa cacttagcag catcgttagg gggattctta
    20401 tatgacgata atcaacagcc ttttggcgaa gaatcccgcc aacgttatat gcaacgtgtg
    20461 atgcactaat tgcgaaaaaa ttaataaatc cgaccgcttg tacaagcggt cttttttgta
    20521 gagaatttta ccaatgtctt tatttaacca aacctcttta tttgaagaga atgccacgcc
    20581 cgagttagtc gagaaaatcg aaactattcg ccaaacattg cgtcaatacg agtatgaata
    20641 tcacgtttta gataacccaa gcgtacccga tgccgaatac gaccgtttaa tgaacgagct
    20701 gaaaaatctg gaatggcagc acccggaact gattagtgcc gactcgccga ctcaacgggt
    20761 tggtgccaaa ccgctggcag gctttgctca agtcacccac gaaatcccta tgctttcgtt
    20821 ggataatgcc ttctccgatg aagacttaga tggcttttta cgccgtatgg aaagctatat
    20881 caccgcctct ccttcgcaac tggaattttg ttgcgaacct aaattagacg gcttggcagt
    20941 gagtatttta tacgaaaacg gtatacttac ccgagctgca acccgtggcg atggcacaac
    21001 cggcgaagaa attaccgcta atatccgcac cattcgcaat attccgttaa agctcaacac
    21061 gactaatcca cctgctcgat tagaggtgcg aggcgaagtc tttatgccac aatcaggctt
    21121 taatgagctg aatgagaaag ccttagctaa aggcgaaaaa acctttgcca accctcgcaa
    21181 tgccgcagca ggttcgcttc gccagttaga tccgaaaatc acccgccagc gtccgttagt
    21241 gctgaatgcc tacggaattg gggtgtatga aagcgatgac gaactgccag ccacccattt
    21301 cgaacgtttg caatggctga aatcgcttgg tattcctgta aataatgaaa tccgcttggt
    21361 tcaaggcaaa gctgctctct tggcttatta tgcggagatt caggctaaac gcccaacatt
    21421 aggctatgat attgatggca cagtattgaa agtaaatgac attgccctac aagagcaact
    21481 cgggtttatc tctcgctcct ctcgttgggc gattgcgtat aaatttccgg ctcaagaaga
    21541 aatgacaatc ctcaaagaag tggacttcca agtgggaaga acaggggcaa tcacccctgt
    21601 ggcgaaatta gagcctgttt ttgtcgctgg cgtaacggta agtaacgcaa cgctacacaa
    21661 cggtgatgaa atcgagcgac ttggtattgt gattggcgat acggtaatta ttcgccgagc
    21721 gggcgatgta attccgcaaa ttacaggcgt gatgttagaa cgccgcccgg aaaatgcaaa
    21781 aaaaattgaa tttccgaccg cttgtcctat ctgtcactcc gctgttactc gggtagaagg
    21841 cgaggcagta gcacgctgta ccggtggttt attctgcgaa gctcaacgta aagaagcctt
    21901 gaaacatttc gtttcacgca aggcaatgga tattgacggc gtaggcgaaa aactaatcga
    21961 gcagttaatg gctcgagagc tgattgaaac gcctgccgat ctgtttaagc tcgatcacac
    22021 taccctaatg cgattagagc gaatggggga aaaatcggct caaaatgctc tcaacagcat
    22081 cgaaaaagca aaaaacacta ctcttcctcg ctttttattc tcgttaggta ttcgtgaagt
    22141 gggcgaggca accgctctca acttagccaa ccattttggt agcttagagg cgatccgcca
    22201 agccactttt gagcaattaa aagaagtgca agatgtgggc gaggttgttg ccaaccgtat
    22261 tgtcagcttc tggcaagaac cgcataatgt ggaagtggtg gaagatttga tcgctcaagg
    22321 tgtacgttgg gaaaacgttg tgaaagccga aattgtagat aacccgttaa aagataaaaa
    22381 cgtggtctta accggcacgc taacccagct cacccgtgat gaagccaaag ccctattaca
    22441 aagtttgggc tgtaaagtct ccggctcggt ttccagcaaa accgattact taatcgccgg
    22501 cgaaaaagcc ggttccaagc tggcaaaagc tcaagagttg ggaattcaga ttttaagcga
    22561 gcaacaattt attgagctta ctcaacatta acaaacaaag gggcagatga ttgaaatctg
    22621 ccccttattc tatctattga atgcttaaaa gcattaacca atcaatttaa actgctgagc
    22681 taaaaacagt aacgtaaagc tagttaagta aattaagccg ataactgcca accaaaataa
    22741 ccagcctttt gcacgatgct caccttttag cactaaagag aaatttaacc acgcaaaaac
    22801 aggggtagaa acaaatgatg aaatcattgc aaattgtaac attttcgcca catcactcat
    22861 aaattggcta ataattaaaa tgccgatgag tgcagttacc gtcatccaaa tacttaattc
    22921 tgtttgtgaa tgttgcttac gcccgctaat taaacgcaac gcttctgcat tcgctcgtga
    22981 atatccatca ataacagtga tcgttgtgcc gaacatacac ataaatgcaa taaatgcgat
    23041 taaaagctta gaccagtcac caatcgcaaa agcatacatt ttgattaatt gagcaatata
    23101 ggcaacaccg gcttgttcta ctttctcacc tgaaccgtac tgaactaacg cacctaatgc
    23161 taaaaaaaca atcgccaaaa ttgccgtgcc gatataaccc acattaaaat caaaaatacc
    23221 gtcctcataa ttcactttac ttaaacgttt tttcgcaata acccacattg agttaatggc
    23281 agaaatttca attggtgcag gcatccagcc cattaatgca acgatgaaca caagtgctgc
    23341 taaattccac ggcgaaggct ctacgaaatc tggagcaatt tcaacgccac cttttaaagc
    23401 agcaatgatc acggcagata ccgtagagat ggttaaagca atcataatcc atttagataa
    23461 tgtatctaag aatttatatt gccctagaag taaaataccc caagtgacca caatcacaat
    23521 agttcctgcc attggaatgc ttaaatctaa cggaatacct aaagcagaaa aaataaattt
    23581 tagaatcgct gctgaaacaa tcgccaccgc agctgtgtta atcattgcag caaaaacgtt
    23641 aaggataaag aaaataataa gataaaactt tcctttttct ttgtagcctt ccaataaagt
    23701 tttaccgcta gctaaggtat attgcacacc aaagcggaaa aacggatatt taaataaatt
    23761 ggctaacaga ataataatcg ccagctgcca gccataaatc gcaccagatt gtgtagaggc
    23821 aataatatgc gaaccaccca ctgccgcaga tgccatcaaa atccccggcc ccattgcagc
    23881 aaatttactt tgccaagttg aatgttctat ttgttgtgtc atatagcttt ccttatcaca
    23941 ttactatcaa aacaagatgg tttcattcta cttataaaaa ccaaataaaa acactcctct
    24001 agaaaagatg tt
//
LOCUS       DANLXD010000029        24004 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.029, whole genome shotgun sequence.
ACCESSION   DANLXD010000029 DANLXD010000000
VERSION     DANLXD010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 24004)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24004)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24004
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.029"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(457..1642)
                     /locus_tag="PXD18_000943"
                     /pseudo
     CDS             complement(457..1642)
                     /locus_tag="PXD18_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252650.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1801..2358)
                     /locus_tag="PXD18_000944"
     CDS             complement(1801..2358)
                     /locus_tag="PXD18_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2857 domain-containing protein"
                     /protein_id="HDL6301392.1"
                     /translation="MIKPITVNEALIGNALLNIKEGNIHPCLKMGFSEEQLKAINNLS
                     IDEIMDISNSVVSFAKVEINHETFWKLLAIAQTNTQQRQIIDRALLLGASIEMLHQYF
                     GLSTSEVSARRQLLGIEEKMGRKAAASDEESTHIWEIWQRYKQRMESLDSQEGLELLC
                     LIAEEGNMNLTVVWKLVSEWYSKHK"
     gene            complement(2351..4000)
                     /locus_tag="PXD18_000945"
     CDS             complement(2351..4000)
                     /locus_tag="PXD18_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HDL6301393.1"
                     /translation="MTKDEKRLAAIAKGLNVSPISNTAPSYQTATPAHYSSDEEYITV
                     TLDKLRPYEHNPRKTRNPNFEMIKESIRRRGLDHKPNITRRPGEDFYIIADGGNTRIQ
                     ALKELFTETKDPKFWSISCQYKPWQGDTADSVEAELNLLIGHLIENDTRADLSFIEKA
                     LGILQAKEYYEKKLNKSLSARELATELEGDGYIIHYTLANKMERCVLYLYPHIPEVLF
                     KGLGHTQIDKLLAIRNNAEEVWAAHQFDTDITFESLWSENLSKFNEATPFQAKEFQSE
                     LITAMVEALDGKVSFETLYLDIDLDEQKFKKIAAKQQEIDNLVEKTVDQINTRQEQQA
                     AKFEPVIKNENKSVATESAKNVIDDVIDDNESDNEQNNAITDLSQLDAPLLDSQDNQT
                     EDYLSQIAHNFGLTPGMSIQEQREQRAESNGLTFACEGRQPVEDIWLIHPARQYRSEA
                     YSLALDIAESVGIDHLVEHVVKQPVDYTYAMKPTDSELSPSVLTLYSFLSMLQTAKHK
                     DENNCVLDSNFLFELDDITLVKLFRLIRVSRHIHQQGGEND"
     gene            complement(4009..5373)
                     /gene="dnaB"
                     /locus_tag="PXD18_000946"
     CDS             complement(4009..5373)
                     /gene="dnaB"
                     /locus_tag="PXD18_000946"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDL6301394.1"
                     /translation="MSNPNKPTTHLYSAEAEAAVIGGLLLDNTLFDDVIGKINSADFY
                     FGVHQALFKGITDLIEVGKPADILTLDEYLKQKNLLKEIGGFAYLAEVSKNTPSAANV
                     GAYADVVLLHSKHRQLLKLGQFIVDQTQTVKTPEKLESVIDEVEKKMTEFSLSDNTKS
                     ATDLSDIFASMLSRMELSAKNGDPVTGTPTGIQGIDEATTGGQPGDLIVIGARPSMGK
                     TAFSQTIAYHTLEKFESAPVFYHSMEMPADQILQRFLAMRARVGLQNIRQADRLDDEE
                     WAKLTAAMGYILEHWKNRLVIDDEGSLTPQKLRTKVRQNARKYGKPSAIFIDYIQLMQ
                     TSQRYENRNLEIANISRSLKLLAKEMDCPVYALSQLNRSLEQRANKRPINSDLRESGS
                     LEQDADVILFIYRDEIYDEDSAFKGTAEIIIGKQRNGPLTSVMTNFRSEFALFENRAS
                     TASH"
     gene            complement(5385..6209)
                     /locus_tag="PXD18_000947"
     CDS             complement(5385..6209)
                     /locus_tag="PXD18_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HDL6301395.1"
                     /translation="MKPLQNGTNKPFTITIASTKGGSAKSTNAANIGAFCAEHGLRTL
                     LIDTDTQPTLSSYYELEYQAPGGTYEFLHFKDVDPTHIISRTAIPNLDLIQSNDPSNK
                     ISPMLRDSPDGALRFSLLLQKIEGYDVIIIDTRGTRDITVDMSVLAADVLFCPILPHI
                     LSAKEFIRGTIGMYQDLETFTAFGFTLPPLKAMINCVDHTKDVKLVSDYLHTLFQNEF
                     DENKTLLEFSVPDRVAYREAATFSKPVYRQSQAEYETIRQLCALLMPQFAQSHFSE"
     gene            complement(6303..6388)
                     /locus_tag="PXD18_000948"
     tRNA            complement(6303..6388)
                     /locus_tag="PXD18_000948"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6352..6354),aa:Leu,seq:caa)
     gene            complement(6700..8160)
                     /gene="xseA"
                     /locus_tag="PXD18_000949"
     CDS             complement(6700..8160)
                     /gene="xseA"
                     /locus_tag="PXD18_000949"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDL6301396.1"
                     /translation="MSNILTVTQLNYSVRHLLEMEMSHIWLTGEISNFSQPVSGHWYL
                     TLKDDKAQVRCAMFKMKNVRVNFRPQNGMQVLVRASVTLYEPRGDYQLIIESMQPAGE
                     GLLQQQFEQLKAKLSAQGLFAQEHKKPIPTFVKTVGIITSSSGAALQDILHILQRRDP
                     SLSVVIYPALVQGKEATQDIVNMIELANRRNECDVLIVGRGGGSLEDLWCFNEESVAY
                     AIYHSQIPIISAVGHETDVTIADFVADLRAPTPSAAAELVSRDQNELKRQLQHQFDKV
                     NLAFDRVWNHKFNRFQQLPLRLNAQHPSKQIQSQQQRFDYMEYRLEQAIYALVAAKKQ
                     VGKELNVRLIHQHPQKQIERQSQMLKQLELKLHWQMEQQLSKKQQKWKNITQRFERNP
                     LPYQLYQQQTMVAKMSQRLAYSIEKIMLKEQRHFQELCTKLDGLSPLKILTRGYSITQ
                     TKDGKTLTSTENIERGEAIITQLKTGKIISQVVDFL"
     gene            complement(8311..8387)
                     /locus_tag="PXD18_000950"
     tRNA            complement(8311..8387)
                     /locus_tag="PXD18_000950"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8351..8353),aa:Met,seq:cat)
     gene            8597..9703
                     /gene="mltA"
                     /locus_tag="PXD18_000951"
     CDS             8597..9703
                     /gene="mltA"
                     /locus_tag="PXD18_000951"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HDL6301397.1"
                     /translation="MNWKAYKKAIAAASVVAIATVLVACSSSGQKGKTTSYDAEKAKF
                     GAKYNGRHFMPYGTHFQAGRLGLNAAPVNQLDFLQQLSNVRAYSSLADSYAIAYGKIS
                     RWISSGGNINDLAKYGISTRLMRGEDGYQNVLMTGYYSPVIKARRTPQGQYQHPIYAM
                     PSSKRFSRAEIYAGALQGQGLELAYSNSMLDNFLLGVQGSGYVDFGDGRLNYFAYAGQ
                     NGFKYASVGRLLVEDGEIPKEKMSVQAIREWGQRNPSRVQGLLERNPSYVFFKNDPTG
                     QVKGSAGVPLVPLASVASDRSIVPSGSVLLVEMPLIDSKGNWTGKHEMRLMVALDVGG
                     AVKGHHFDLYQGIGDKAGHIAGLMKHYGRVWVLN"
     gene            9716..10165
                     /locus_tag="PXD18_000952"
     CDS             9716..10165
                     /locus_tag="PXD18_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301398.1"
                     /translation="MLKKLSAIFLLLPSAVLANNLQNITASTEPKYKISEIDVRILIR
                     QLNNIEQCIYPELAKPGYQQIYANWNLAENLTMQYFEYQLLKELLGEENQKLMQNDTL
                     STEYFHLLHSRLNHQKANVDPEKCDTFKPRYKEIYKSMENALTKKNQ"
     gene            complement(10199..11716)
                     /gene="purF"
                     /locus_tag="PXD18_000953"
     CDS             complement(10199..11716)
                     /gene="purF"
                     /locus_tag="PXD18_000953"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005647425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDL6301399.1"
                     /translation="MCGIVGIIGNSPVNQAIYDGLTLLQHRGQDAAGIVTIDDENRFR
                     LRKANGLVSDVFQQEHMVRLQGNVGIGHVRYPTAGSSSVSEAQPFYVNSPFGITLVHN
                     GNLTNNAELKARLYNEARRHVNTNSDSESLLNIFAYFLDLYSTQHLSPDNIFETVRKT
                     NDSIRGAYACIAMIIGHGMVAFRDPFGIRPLVLGKREIEGKTEYMFASESVALDVVGF
                     EFVRDVLPGEAIYVTFDGQLHSQICADNPKLNPCIFEYVYFARPDSVIDGVSVYSARV
                     HMGELLGEKIKREWGRIIDDIDVVIPIPETSNDIAVRIANMLYKPYRQGFVKNRYVAR
                     TFIMPGQAQRKSSVRRKLNAIASEFKGKSVLLVDDSIVRGTTSEQIVEMARAAGAKRV
                     YFASAAPEIRYPNVYGIDMPTCEELVAYDRSVEEVAQMIGVDKLIFQDLEALYKSIQL
                     ENPTIHRFDDSVFTGEYITGDVDKCYLDSIARSRNDKAKAEAAKQATNLEIHNER"
     gene            complement(11731..12234)
                     /locus_tag="PXD18_000954"
     CDS             complement(11731..12234)
                     /locus_tag="PXD18_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HDL6301400.1"
                     /translation="MVDLIVIGIIAFSVLISLWRGFTNEALSLLGWVIAFFVASSFYP
                     YLSGYLTQINSVYLQNSEFLRNGIAAAILFILTLIVCGVINGLLGKVIDLSGMSITDR
                     ILGGAFGALRGILIVSAILFFLDTFTQASQTELWKSSLLIPHFDFIVKWFFEQLQANS
                     SFLNTTK"
     gene            complement(12380..12841)
                     /gene="rnhA"
                     /locus_tag="PXD18_000955"
     CDS             complement(12380..12841)
                     /gene="rnhA"
                     /locus_tag="PXD18_000955"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HDL6301401.1"
                     /translation="MKLVEIFTDGSCLGNPGKGGIGILLRYNGYEKTVSKGYFQTTNN
                     RMELRAVIEALAMLKEPCKVQLNSDSQYMKNGIQKWIFNWKKNDWKTSDKKPVKNKDL
                     WVALDQEIQRHQIEWSWVKGHSGHRENEICDELAKQGANNPTLDDVGYIAD"
     gene            complement(12934..14265)
                     /gene="argG"
                     /locus_tag="PXD18_000956"
     CDS             complement(12934..14265)
                     /gene="argG"
                     /locus_tag="PXD18_000956"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005722481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDL6301402.1"
                     /translation="MSATILEALPLGQKVGIAFSGGLDTSAALLWMRKKGAVPYAYTA
                     NLGQPDEDDYNAIPKKAMEYGAENARLIDCRQQLAHEGIAAIQCGAFHISTGGIPYFN
                     TTPLGRAVTGTMLVAAMKEDDVNIWGDGSTFKGNDIERFYRYGLLTNPKLKIYKPWLD
                     QLFIDELGGRLEMSKFLIENGFDYKMSVEKAYSTDSNMLGATHEAKDLEELSTGMKIV
                     KPIMGVAFWDESVEIKAETVSVTFEEGVPVALNGKRIDDAVELIMEANRIGGRHGLGM
                     SDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGLRLGRLLYQ
                     GRWFDPQALMLRETAQRWVAKAITGTVTLELRRGNDFTILNTESPNLTYEAERLSMEK
                     VEDAPFTPADRIGQLTMRNLDIVDTRGKLAVYTDAGLLAANNSVIPQLGKK"
     gene            14449..15489
                     /locus_tag="PXD18_000957"
     CDS             14449..15489
                     /locus_tag="PXD18_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL6301403.1"
                     /translation="MKKLLVIRNDKIGDFMVCFPAFAMLKQSMPNVEITALVPSYTAP
                     LAELCPSIDKIIIDTANKKDKNEFNRILQAVKNEQFDAVICFVSDWHNAKLTWQSGIK
                     YRLAPATKLFQFLYNHRLTQRRSQSAKAESEYNLDLARAFLSKHNIPIVEPHTPYLSV
                     EQQTVQAQKAKLCEQLNITTVKKWVFVHSSTGGSANNLSIEQYAELIQGILAEFDCYV
                     VLTAGKGESEKAQQLAQQINHNNVVVYDKNEGLQDFTHSLACADLFIAGSTGPLHISG
                     ALNIPTIGFYPSRLSAIPRRWKPINDANKHIAFCPPSDKASQMNLTLISISEALKTIV
                     PFIRRMWNTPSL"
     gene            complement(15554..16312)
                     /locus_tag="PXD18_000958"
     CDS             complement(15554..16312)
                     /locus_tag="PXD18_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDL6301404.1"
                     /translation="MPTLSVAMIVKNEAQDLRACLDTVKDWVDEIVILDSGSTDETPQ
                     IAAEYNARFYTNTDWQGFGKQRQLAQQYVTSDYVLWLDADERVTAELKQSILQAVKND
                     EKNTVYKISRLSEVFGKQIRHSGWYPDCVVRLYRTEFAKYGDELVHEKVHYPKEAKIQ
                     KLQGDLLHFTYKDIHHYLVKSASYAKAWAIQRANAGKTASLFDGVTHAIGCFVKMYLL
                     KAGFLDGKQGFLLAVLSAHSTFVKYADLWNRTRK"
     gene            16439..16753
                     /gene="yhbY"
                     /locus_tag="PXD18_000959"
     CDS             16439..16753
                     /gene="yhbY"
                     /locus_tag="PXD18_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010786380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HDL6301405.1"
                     /translation="MSITLTTKQKQFLKGLAHHLSPVVMLGGNGLTEGVLAEIDNALD
                     HHELIKVKVAGADRETKQLIIDAILRETKAAEVQTIGHILVLYRQSEEKKISLPKATK
                     AI"
     gene            16814..17536
                     /locus_tag="PXD18_000960"
     CDS             16814..17536
                     /locus_tag="PXD18_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HDL6301406.1"
                     /translation="MFKKFSLYTLAMLLIPVVTWLANWHWSLAIQYAEFDFDYFLYLI
                     TETGSVPYAIITCVVFALLLARVVRKRYSLIFVITVCVASMVATQAIKTAMKSTFQEP
                     RPFVTALFQDKTDDFYQLTREQRGLAVMEKIGANQNFVTAHQAKEVGYSFPSGHTIFA
                     VSWLLLVVGFCRNMRGQAVVLAHFFAISWAALMLISRLRLGMHYPIDLFTSSLIAFLI
                     NLALFVWFVPWLESKKWFAKKP"
     gene            17605..17766
                     /locus_tag="PXD18_000961"
     CDS             17605..17766
                     /locus_tag="PXD18_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301407.1"
                     /translation="MEMSIEKIAELLSDKEKDDYPFSIEERQFAAQASADTWEAILNN
                     TIQPFDFKK"
     gene            17774..18136
                     /locus_tag="PXD18_000962"
     CDS             17774..18136
                     /locus_tag="PXD18_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301408.1"
                     /translation="MYQVFIAEPKDPNLEKGLLKHFIKSYLTQEELDFLHKILTNLPN
                     IRPFWGDTGYKYIVIDNVYFLYEVSESETKVILLGTKFNNKRKTFNFANTKTQQKSMK
                     KWINDLAIYKPHKINQSQ"
     gene            18149..19066
                     /gene="nagK"
                     /locus_tag="PXD18_000963"
     CDS             18149..19066
                     /gene="nagK"
                     /locus_tag="PXD18_000963"
                     /EC_number="2.7.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005708433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine kinase"
                     /protein_id="HDL6301409.1"
                     /translation="MAIYYGLDVGGTKIELAAFNEKLEKLHSERVPTPQTNYQDWLTA
                     IKTLVETADTKFDEKGTVGLGIPGFVNRETGIAEITNIRVADGKTILKDLAECLGREV
                     RAENDANCFALSEAWDESNKPYSTVLGLIIGTGFGGGFVFDGKIHSGRIGMAGEVGHM
                     QLNYHALKLLDWDKAPIYECGCGNQACLDTYISGRGFELLFNDLVGEKISAKAIIERF
                     YQQETKVVAFVEKYIELMAISISNLITILDPDMIVFGGGLSNFDYIYQALPKALPKHL
                     MRSAKVPVIKKAIHGDSGGTRGAAALFLK"
     gene            complement(19137..21086)
                     /locus_tag="PXD18_000964"
     CDS             complement(19137..21086)
                     /locus_tag="PXD18_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HDL6301410.1"
                     /translation="MYQRSQSRTVLFPILLFVGINLVILTLSRLVLGVWQSDRVSAVD
                     GWIPLILQGIRIDISSLCWLFGLPALFSVLCFHKNVLGSIWQTVLRIWLTVGSVFILF
                     MEVATPNFIETFDLRPNRLFIEYLVHPREVFTMLINGHLWAVICGIGIAMISLIIYWK
                     LSGWATKNLHFPSWKMRPLLALLVAAIVFVGGRSSFAHRGINPAMVAFSSDPLVNSLV
                     LNSGYSVLYAVQQLKDEDKSSEQYGKMSVEEMFNIVKQVRNRPASDYISDEIPTLTQN
                     KATYQGKPKNIVIILEESLGAQFVGSLGGKNLTPNLDKLSEQGWYFTNLYATGTRSVR
                     GIEAVTAGFTPTPARSVVKLTKSQTNFFSIAELLKRQGYHTSFIYGGEKHFDNMASFF
                     YGNGFQQIIDEKDYKNPKFTATWGVSDEDLFDKANETFNQLHKSGKPFFSLVFSSSNH
                     DPFEFPDGKIELYEQPKQTRHNAAKYADYAIGHFFELAKKSEYWQDTVFLVIADHDSR
                     AVGEHLVPIQHFHIPALLLGEHIQPRTDNRLVSQLDMPTTLLSVAGISGQYPMIGYDL
                     TQDIDPNRAFMQYDATQAMMRGNDVVVMRPNLPIEGFSYDKANYKLTPKEQPESFKKE
                     ALAHALLGSYLYKNQLYKLPEETKQ"
     gene            complement(21119..21907)
                     /locus_tag="PXD18_000965"
     CDS             complement(21119..21907)
                     /locus_tag="PXD18_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HDL6301411.1"
                     /translation="MQVTELNIYPIKSTQAIQVSQAFVEPKGLNFDREFMLAEPNGKF
                     ITARKDPELYRLAAFPIATGVMITHTSGQKCVALYQDFVEEQSSEVWGTHFNAKVAAE
                     AVNQWLSEIFGRAVQLRWLGSQSQRIVANFADHPMSFADSNPVSLMSLKSLEQVQQWS
                     PIPLEMARFRPNIVIDGNVAFEEEQWQQVQIGEVLFTKAALCTRCILITRDLNTLELD
                     PKSEPFRTLKEKHCDEKGKPVFGIHLVPQNSGVIKVGDPVIIQL"
     gene            22032..22262
                     /gene="xseB"
                     /locus_tag="PXD18_000966"
     CDS             22032..22262
                     /gene="xseB"
                     /locus_tag="PXD18_000966"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HDL6301412.1"
                     /translation="MAKKPTQDFESTLKELEAIVTHLESGDLPLEEALNEFETAIKLV
                     QQGQERLQKAEQRIQILLNKNDTAPLSDYERE"
     gene            22268..23161
                     /gene="ispA"
                     /locus_tag="PXD18_000967"
     CDS             22268..23161
                     /gene="ispA"
                     /locus_tag="PXD18_000967"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl diphosphate synthase"
                     /protein_id="HDL6301413.1"
                     /translation="MSYLLATDLTHLQQRINHFLAEKLKTTDSVGSPLVEAMAYAVLL
                     GGKRVRPFLIYATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDDDRLRRGKPT
                     CHIAFDEATAILAGDALQSFAFELLATDPHLTDREKVVQVTELATASGAKGMCLGQSL
                     DLIAENKAVSLEELELIHRNKTGALILSSVMMGLNLSEYSQNVAIKQPLVNYAKAIGL
                     AFQVQDDILDVIGETDKIGKIVGSDEHLNKSTYPKLLGLDGAKQKAEMLYQTALHSLE
                     QLPFDTTALKELANFIVKREN"
     gene            complement(23196..23996)
                     /locus_tag="PXD18_000968"
     CDS             complement(23196..23996)
                     /locus_tag="PXD18_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HDL6301414.1"
                     /translation="MCQLLGMNCNTPTDITFSFDGFRRRGGLTDHHTDGFGIAFFEGK
                     GVRVFRDNRPGASSPMAEAISQYQIKSLNVIAHIRKATRGDVNLENTHPFIRELWGEN
                     WVFAHNGTVEGVGVCEECHYQPIGTTDSEAAFCRIVSELKEMYPAKPSEKEIFDAVVQ
                     ITSRIAEHGVFNFVLSNGHWMIARCTTNLHYVCRKAPFGKALRDDDVSIDFSQYTKIT
                     DKVTIIATQPLTKNENWTKMKNGGYVFFKDGDVVYEIEGTLPEAQPHV"
BASE COUNT         7063 a         5002 c         4647 g         7292 t
ORIGIN      
        1 ctctacactg attatttttt actcactgta gaacccctct acactgatta ttttttactc
       61 actgtagaac ccctctacac tgattatttt ttaatcactg tgtaccccct acacactgat
      121 tgttttttgc tcattgtaga gtccctctac actgattatt ttttactcac tgtagaaccc
      181 ctctacactg attgtttttt aatcactgtg taccccctac acactgattg ttttttgctc
      241 attgtagagt ccctctacac tgattatttt ttactcactg tagaacccct ctacactgat
      301 tgttttttaa tcattgtaaa cagtgtttac agtgattatt ttttagcctt tgaagcgggc
      361 cgcttcactg attatttttc actcactgtg taatccctac acgctgtctg ttttttgctc
      421 gctgttaagc cccttaacag tgattgtttt ttaaccttat tgtaaaagta attcagctct
      481 aaacttctgc atacggctcg ccatttgctc tctgtctgct ggagttaata ccggtttctc
      541 agtaggctgc tcagtcagtt tttgtataga atgagcagaa ttattgttag tctgattttg
      601 tgagggaaga ttttttccta attcaaaata gtagggttta aattcaccct gcttcgcccg
      661 ctggataagc gtatagagat aacctttcgg ttttttcaca tcctgctttt gaataatgcg
      721 ttgttgtgct tccagcaaaa tagcttggca taaaccgaga tcgaatcctt tcattgcctg
      781 tgcagtgagt ttttgttcaa gtgaggttag tgggatttct tgtggccaag taatttcgct
      841 aggttcccca gtacagtact tattaatata taaagtactg tacatctgac ttccttaatg
      901 gaagtaagtc taaaatcaat gacttatctt catttttagc cctaacttcc ttattggaag
      961 tctggttttt tgaggatttt ttcctgactt cctcatcaaa atccctaact tccatagtgg
     1021 aagtcaggat attttgttga attttgctta attcttgttc tgtttgcgat ggctgtttat
     1081 ctttcaccag ctgctgttgc tggtatgttt gataacgact ttgcaaacag tctaaatgag
     1141 agacataatg ccatttggtt ttgtctgtca ttagactttc aacaatatga tttgccacac
     1201 cattaataag gctatcttta tgtttggtgc atttatctaa aaaagagaga tagtcgctat
     1261 ttaattgaat tgcatctaaa attggcacag gttcatcgtg caggatatac acattacctt
     1321 gtacataacc tcgctcatca cgcactgttt cacataaagt aagccagcga gtaagacgga
     1381 gtaaatagag tgtttgagtc acgacttttt ccgataattt agcctccgca taaggtctat
     1441 cggataacat tttgctgagc gtctcataag agggaaataa tcctccttga aaggcctgaa
     1501 cattgcactt aatgagctgc caagcaaact ttgctcttgg tgtaaggcag ggatcttgta
     1561 ataatcgagt agggactgtt tcgtgttggt tgccaaaaaa tagtaatcca tgccctgttg
     1621 gcttattcgt actgctaaac attgtttctc tccactagga taaaagagtt tttctcttgc
     1681 tattctccct cctatgacta taatgcacgg gacttcggca aagtccttgt aattcatagg
     1741 atagatatac aagacccaat atcgaatgcc ccaaagctcc aacttcgggg catttgtttt
     1801 ttacttatgt tttgaatacc attcggaaac tagtttccaa acaacagtta gattcatatt
     1861 accttcctca gcaatcaggc aaagaagctc taacccttct tgtgaatcta ggctttccat
     1921 tcgttgttta tatcgttgcc aaatctccca aatatgagtg gattcctcat cacttgctgc
     1981 ggctttccgt cccatcttct cttcaatgcc gagtaattga cggcgtgctg aaacctctga
     2041 tgtcgataaa ccgaaatact ggtgcagcat ctcaatagag gctcccagta ataaagcccg
     2101 gtctataatt tgtcgctgtt gagtattagt ttgtgcaatt gccagtaatt tccaaaaagt
     2161 ctcgtggtta atctctactt ttgcaaaaga cactacggag ttgctaatat ccataatttc
     2221 atcaatactg agattattga ttgcttttag ttgctcttca gaaaatccca tttttaaaca
     2281 aggatggata tttccttctt taatattgag cagggcgtta ccaatcaatg cttcatttac
     2341 ggtaattggc ttaatcattt tctcctcctt gttgatgaat atggcgactg acccgaatga
     2401 gacggaaaag tttgactaag gtaatatcat caagctcaaa caggaagttg gaatctagga
     2461 cacagttatt ttcatcctta tgtttagctg tctgtaacat tgaaaggaat gaatagagtg
     2521 ttagaacaga cggtgaaagt tcactatctg tcggtttcat tgcataagtg taatccacag
     2581 gctgtttcac aacatgttca accaagtggt caatgcccac actctctgca atatctaagg
     2641 caagggaata cgcctctgaa cgatattgac gagcaggatg aatcaaccaa atatcttcaa
     2701 ccggctggcg accttcgcaa gcgaaagtga gcccattgga ttctgctcgt tgctctcgct
     2761 gttcttgaat gctcattccc ggtgttagtc cgaagttatg agcaatttgg gagagataat
     2821 cctcagtttg attatcttgg ctatctaaca atggagcatc tagctgagat aagtcagtaa
     2881 tggcgttatt ctgctcattg tcactttcgt tatcatctat tacatcatca ataacatttt
     2941 tagctgattc tgtggcaaca gatttatttt catttttgat aactggttca aattttgctg
     3001 cttgttgttc ctgtctggta ttgatttgat cgactgtttt ttcaactaaa ttatcaattt
     3061 cttgttgttt agccgctatt tttttgaatt tttgttcatc taagtcaata tctagataaa
     3121 gtgtttcaaa actcactttt ccatctaaag cttcaaccat tgccgtaatc aattcacttt
     3181 ggaattcttt tgcttgaaat ggtgtagctt cattaaattt ggataaattt tctgaccaga
     3241 gcgattcaaa agtaatatca gtatcaaatt gatgggctgc ccatacctct tcggcattat
     3301 tacgaatagc taataactta tcgatttgag tatgccctaa acctttaaat agaacttctg
     3361 gaatatgggg atatagataa agtacacatc gctccatttt attagccaac gtatagtgga
     3421 taatatagcc atcaccctct aactcagtag ctaattccct tgctgaaagt gatttattca
     3481 atttcttctc gtaatattct ttcgcctgta aaataccaag agctttttca ataaatgaca
     3541 aatccgcacg ggtatcattt tcgatcaaat gcccgataag taaattgagt tcggcttcga
     3601 cactgtcggc agtatcacct tgccaaggct tatattggca actgatagac cagaatttcg
     3661 gatctttggt ctcagtaaac aattctttaa gtgcctgaat acgagtatta ccgccgtcag
     3721 cgataatgta aaaatcttct cccggacggc gggtaatatt aggtttatga tctaacccac
     3781 gacgccggat tgactctttg atcatctcaa agttaggatt acgggttttt ctagggttat
     3841 gttcatacgg ccgtaactta tctaatgtca ccgtaatata ttcctcatca ctactgtaat
     3901 gagccggtgt cgcagtctga taggagggtg ccgtatttga aataggtgaa acatttagcc
     3961 ccttcgctat agctgctaat cttttttcat cttttgtcat aatctgtcct aatgtgatgc
     4021 tgtgcttgct ctattctcaa aaagtgcaaa ctcacttcta aaattggtca ttactgaagt
     4081 cagcggtccg tttcgttgtt taccgataat aatttcagca gtgcctttga aggcggaatc
     4141 ttcatcataa atttcatctc gatagatgaa taaaatgaca tcggcatctt gctcaagtga
     4201 gccggattct cgtaaatcag agttgatagg gcgtttattg gcccgctgtt ccaatgagcg
     4261 gttcagctga gataaagcat aaacagggca atccatctct ttggctaaca acttaagtga
     4321 gcgagaaata ttcgcaatct ccaaattgcg gttttcatag cgttgcgaag tctgcataag
     4381 ctgaatatag tcaataaaaa tggctgacgg ttttccatac ttacgggcat tttggcgaac
     4441 cttagttctt aatttttgag gagtcagact accttcatca tcaataacta agcgattttt
     4501 ccagtgttca aggatatacc ccattgcagc tgtcaatttt gcccattcct catcgtccaa
     4561 gcggtctgct tgtcgaatat tttgcaatcc gactcgggca cgcatagcaa gaaaacgttg
     4621 taaaatctga tctgccggca tttccatact gtgatagaac acaggagccg actcgaattt
     4681 ttcaagtgta tggtaggcaa tagtttgaga aaatgcggtt tttcccatcg aaggacgggc
     4741 accaatcaca attaaatcac ccggttgccc accggtagtc gcttcatcga tgccttgaat
     4801 acctgtcggt gttccagtca caggatcacc atttttagcc gaaagctcca tacgagagag
     4861 catactggca aaaatatcac ttaaatctgt tgcagatttg gtattgtcag aaaggctgaa
     4921 ttcagtcatt tttttctcaa cttcatcaat aactgattca agtttttccg gtgttttcac
     4981 agtctgtgtc tgatcgacaa taaactgccc cagttttaaa agttgccggt gtttactgtg
     5041 taacagaacc acatcagcat aagcccccac attggccgcc gaaggggtgt tttttgaaac
     5101 ttctgcaaga taggcaaaac cgccgatttc cttcaacaga tttttctgtt ttaggtattc
     5161 atctaatgtg agaatatctg caggtttccc cacctcaatt aaatccgtaa tccccttgaa
     5221 taaggcttga tgcacaccaa aataaaagtc agccgaatta atcttgccaa tgacatcgtc
     5281 aaagagagtg ttatctaata acaatccccc gatgacagcg gcttcagctt ctgctgaata
     5341 gagatgggtg gttggtttat ttgggttaga cataaatccc ccaactactc agaaaaatgt
     5401 gattgtgcaa actgtggcat cagtaatgca caaagctgac gaatggtttc atattcagct
     5461 tggctctggc gatagacagg ttttgaaaaa gttgccgctt ctcggtatgc cacacgatca
     5521 ggcacagaaa attccagtaa tgttttgttt tcatcaaact cattttggaa gagagtatgc
     5581 aggtagtcgg aaaccaattt gacatctttg gtatgatcaa cacagttaat cattgctttt
     5641 aacggtggca gggtaaaacc aaaggctgta aaagtttcta gatcttgata cataccaatt
     5701 gtgccacgaa taaattcttt agctgacaag atatgaggaa gaatcgggca gaaaagaaca
     5761 tcagcagcca ataccgacat atctacagta atatctcgag tgccacgggt atcaatgata
     5821 atgacatcat agccttcaat tttctggagc agtaaactaa aacgtaaagc cccgtccggt
     5881 gagtctctta gcattgggct gattttattt gacgggtcat tagactggat caagtcaaga
     5941 tttgggatag ccgttctaga aataatgtgg gtaggatcta catctttaaa atgcagaaat
     6001 tcataagttc caccgggagc ttgatattcc aactcataat aagagcttaa tgtgggttga
     6061 gtatcggtat caataagaag ggttcttaga ccgtgttctg cacagaatgc accaatgtta
     6121 gcggcattcg tactcttggc agagcctcct ttggtcgaag caatagtaat ggtaaaaggt
     6181 ttgtttgtac cgttttgtaa tggtttcata atttactctc ttaacaaagt tgaagttaag
     6241 gagtattggc attataaact gtatatttag agtgagtatt atttgaaagg aacgcagttg
     6301 aatggtgcct gaggtcggac tcgaaccgac acggttattc accaatggat tttgaatcca
     6361 tcatgtctac caatttcatc actcaggctg agagtgtttt ttattcaatc gccagtattt
     6421 cctattagtc tacgcaaaag attttgaatc cgctgcgtct accgatttcg ccacactggc
     6481 ttaatttttg cacgattata gggaaatatg accgcttgtg caagcgtaaa aatgcctttt
     6541 gaaatcggtt gatttaaaaa tcagcactca attcatcttt acaaaaatag ttatgcacat
     6601 cacctgtgga taactaagtg aacaaccctg tttataaata tttaacctac tgattttact
     6661 ataaataatt ttaaaaattg gcagcgttca aaatttcccc tacaaaaaat ccactacttg
     6721 acttattatt tttcctgttt ttagttgggt gataatagcc tcaccacgtt caatattttc
     6781 tgttgaagta agcgttttac cgtctttagt ttgggtaatt gagtagcctc tggtcaagat
     6841 tttcaatggg ctaagtccat caagtttagt gcataactct tgaaaatgtc gctgctcttt
     6901 cagcattatt ttttcgatag aataagccaa gcgttgcgac atttttgcca ccatcgtttg
     6961 ttgctgataa agttgataag gtagcgggtt gcgttcaaac cgttgcgtaa tgtttttcca
     7021 tttttgctgt tttttgctga gttgctgctc catttgccaa tggagtttca gctccaattg
     7081 cttaagcatt tgggattggc gttcaatctg cttttgcgga tgttggtgaa ttaaacggac
     7141 atttagctct ttccccacct gctttttggc tgcaacaagt gcataaattg cctgctcgag
     7201 gcggtattcc atataatcaa aacgttgctg ttgcgattga atttgtttgc ttggatgctg
     7261 agcattcagg cgtaagggga gttgttggaa acggttaaat ttatggttcc aaactcggtc
     7321 aaaggctaaa ttcactttat caaactgatg ttgtaattgg cgtttcaatt cattttgatc
     7381 tctgctgact aattccgcag cagccgaagg cgttggtgcg cgcaaatctg caacaaaatc
     7441 agcaatggtc acatcggttt cgtgtcccac cgcactgata atcgggattt gtgaatgata
     7501 aatggcataa gcgacactct cttcgttgaa acaccataaa tcctctaatg aaccgccacc
     7561 tcgcccgaca attaatacat cacactcatt gcggcggttt gccagttcaa tcatattcac
     7621 aatatcttgc gttgcttctt tgccttgcac gagagccggg taaataacca ctgataagct
     7681 cggatctcgt cgttgcaaaa tatgtaaaat atcttgtaat gcggctccgc ttgaggaggt
     7741 aataatacca acggttttaa caaaagtagg aattggcttt ttatgctctt gagcaaacaa
     7801 gccttgagct gaaagttttg ctttaagttg ctcaaattgc tgctgtaaca agccttcgcc
     7861 cgccggttgc atactctcaa taatgagctg atagtcacct cgtggctcat agagtgtaac
     7921 acttgcccgc accagcacct gcataccgtt ttgtgggcga aaattcactc ttacattttt
     7981 cattttaaac atcgcacaac gcacttgtgc tttgtcatct tttaaagtga gataccaatg
     8041 ccccgaaact ggttggctga aatttgagat ttcgccggtt agccaaatat ggctcatttc
     8101 catttcgagc aaatggcgga cggaatagtt gagttgggta acagttaaaa tattgctcat
     8161 aataatcaaa aaagcgtaaa tgtagtagaa gtgtaacgag aaatgaaagc gagaggaagc
     8221 ttttgcagtc aacaagcggt tattttttgc tgttttttgg caaataaaac gaaaaccctc
     8281 gatgtgattc actatcgagg gtttggaatg tggttgcggg ggccggattt gaaccagcga
     8341 ccttcgggtt atgagcccga cgagctacca agctgctcca ccccgcgtct gatgaggcta
     8401 taatatatca atttgacata atgacaagta aaatcataca aaattgctct aagtgatgta
     8461 aattacaaca gatatagtat caaaatacgc ttattgttgt aaaaacaatc aaattatatt
     8521 ctggttttat tttgtcgctg tttttgctat tcttctgttt atttttcaca ttttattaac
     8581 gatataagga tattcgatga attggaaagc atataaaaaa gctattgcgg cagctagcgt
     8641 ggtagcgatt gcaacggtat tagtggcgtg ttcgtcttca ggccaaaaag gcaaaacaac
     8701 ctcttatgat gcggaaaaag ctaaatttgg agcaaaatat aatggtcgtc actttatgcc
     8761 ttatggcaca cattttcaag ctggacgttt aggattaaat gctgctcctg ttaatcaact
     8821 agacttttta cagcagcttt ctaatgtcag agcctatagt agcttggcag attcttatgc
     8881 tatcgcttac ggaaaaatca gtcgttggat ctcatcgggc ggtaatatta atgatttagc
     8941 aaaatatggt attagtactc gtttaatgcg tggcgaagat ggctaccaga atgtgttaat
     9001 gacagggtat tactcgccgg ttatcaaagc ccgtagaacg cctcaggggc aataccaaca
     9061 cccgatttat gcgatgccgt ctagcaaacg tttttcacgg gcggaaattt acgcaggagc
     9121 attgcaaggt cagggcttag aactggctta tagtaattca atgctcgata acttcttatt
     9181 aggtgttcaa ggtagcggtt acgttgactt tggtgatggt cgcttaaact attttgctta
     9241 tgcagggcaa aatggcttta aatatgccag cgttgggcgt ttattagtag aagatggcga
     9301 aattccgaaa gagaaaatgt cagtgcaggc tatccgtgaa tgggggcaac gtaaccctag
     9361 ccgtgttcaa ggtttgttgg agcgtaatcc atcgtatgtt ttctttaaaa acgatcctac
     9421 cggtcaggta aaaggctctg ccggtgtgcc gttagtacca cttgcatctg ttgcatcaga
     9481 tcgtagcatt gtgccatcag gtagcgtgtt gttggtcgaa atgccgttga ttgatagcaa
     9541 aggaaattgg accggcaaac acgaaatgcg tttaatggtg gctcttgatg ttggcggtgc
     9601 agtgaaaggc catcacttcg atttatatca agggattggc gataaagcag gccatatcgc
     9661 aggtttaatg aaacattacg gccgtgtttg ggtattaaat taatacaggg taactatgtt
     9721 aaaaaaacta tctgccatat tcttacttct accgagcgcc gtgcttgcaa ataatttgca
     9781 aaatataacc gcttcaactg agcctaaata taaaatctca gaaatagatg tcagaatttt
     9841 gatacgccag ctcaataata ttgagcaatg tatctatcct gagttagcta aacccggtta
     9901 ccagcaaatc tacgcaaatt ggaatctggc tgaaaattta acgatgcaat attttgaata
     9961 tcagcttcta aaagagttgc tcggagagga aaatcagaaa ctgatgcaaa atgatacgct
    10021 ttctaccgag tatttccatt tactgcattc tcgtttaaat caccaaaaag caaatgtaga
    10081 tcccgaaaaa tgcgatacat ttaaacctag atataaagag atttataaaa gtatggaaaa
    10141 tgcactcact aagaaaaatc aatagtaaaa aactcgcagt tttcactgcg agtttctttt
    10201 atctttcgtt atgaatttct aaattggtgg cttgttttgc cgcctctgct tttgctttat
    10261 cgtttcgaga tcttgctata ctgtctaaat agcatttatc tacatcacct gtaatatatt
    10321 ctcctgtaaa tacagagtca tcaaagcgat gaatagtcgg attttccagt tgaatagact
    10381 tataaagtgc ttcaaggtct tggaaaatca atttatccac ccctatcatc tgtgcaacct
    10441 cttccactga gcgatcataa gccactaatt cttcacaagt cggcatatca atgccataca
    10501 cattcgggta gcgaatttcc ggtgcggcag aggcaaaata aacccgtttt gcaccagctg
    10561 ctcgtgccat ttccacgatt tgttcagacg ttgtacctcg tacaatagaa tcatcaacca
    10621 gtaacacgct tttgccttta aattcagagg caatcgcatt taatttacgg cgaaccgagc
    10681 ttttacgctg tgcttgcccc ggcataataa aagttcgagc tacatagcgg tttttaacaa
    10741 acccttgacg atagggttta tacaacatat tagcaatacg taccgcaata tcatttgagg
    10801 tttcaggaat cgggatcacc acatcaatat catcgataat tcgtccccat tcacgtttaa
    10861 ttttctcacc taataattcg cccatatgca ctcgtgcaga atatacagaa acgccatcaa
    10921 tgacggaatc aggacgggca aaataaacat attcaaaaat acaaggattc agttttggat
    10981 tatcggcaca aatttgcgaa tgtaattgcc catcaaaggt aacataaatc gcttcacccg
    11041 gcagcacatc tcgcacaaat tcaaacccca ctacatcaag agccacactt tccgaagcaa
    11101 acatatattc ggttttaccc tcgatttcac gtttacccag cactaacggg cgaataccga
    11161 atgggtcacg gaaagcaacc ataccgtgtc cgataatcat cgcaatgcaa gcataagcac
    11221 cacgaatgct atcattggtt ttacgaaccg tttcaaagat attgtctggg cttaaatgct
    11281 gagtggaata gagatctaaa aagtaagcaa aaatattaag aagggattca gaatcagaat
    11341 tagtgttcac atggcggcgg gcttcgttgt ataagcgagc tttaagttcc gcattattag
    11401 ttaaattacc gttgtgaact aaggtaatac cgaaaggtga attgacataa aatggctggg
    11461 cttcagacac acttgagcta cctgctgttg ggtagcgaac gtgaccaatt ccaacattgc
    11521 cttgtaatct caccatatgc tcttgctgga aaacatcgct gactaagccg ttagctttgc
    11581 gtaagcggaa acgattttca tcgtctatgg tgacgatacc tgcggcatct tgtcctcggt
    11641 gttgaagtaa tgttaaacca tcataaatcg cctgattcac cggcgaattc ccaataatac
    11701 cgacaatgcc gcacatatag aaaaacctct ttatttagtc gtgtttaaaa aactggaatt
    11761 tgcttgtaac tgttcaaaga accacttcac aataaagtca aaatgcggaa ttaatagcga
    11821 tgatttccat aattccgttt ggcttgcttg ggtaaaggta tctaagaaaa ataaaatagc
    11881 cgacacaatt aaaataccac gcaatgcccc aaaagcaccg cctaaaatac ggtcggtgat
    11941 agacattccg ctcaaatcaa tcactttgcc taataaaccg ttgatcacac cacaaacaat
    12001 taaagtcaaa atgaacagaa tcgccgctgc aataccattg cgtaaaaatt ctgaattttg
    12061 caaataaacc gaattaattt gtgtgagata accgcttaaa taaggataaa acgagcttgc
    12121 cacaaaaaag gcgattaccc aaccaagtag cgataatgct tcattggtaa aacctcgcca
    12181 taaactgata agcactgaaa aagcaatgat tccgataaca attaaatcaa ccataacaca
    12241 ccttaaagcg taaagctctc ctattctaca aaaaaagaaa acgtttgcgt agcactattt
    12301 cgctaaaaat aagtgcttta tgcaaataca agcggttaaa ttcggtaaaa aatttacaca
    12361 atccgaccgc ttgtaaaacc tagtctgcaa tataaccaac atcgtccaac gttggattat
    12421 ttgctccttg tttagccagc tcatcgcaaa tctcattttc acgatgtcct gaatgccctt
    12481 tcacccaact ccattcaatt tggtggcgtt gaatttcttg gtctaaagca acccataaat
    12541 ctttattttt aactggcttt ttatcgctgg ttttccagtc atttttcttc cagttaaaaa
    12601 tccatttttg gatcccgttt ttcatatatt ggctgtcact attgagttgc accttacaag
    12661 gctcttttag cattgctaaa gcctcaatca ccgcccgcaa ttccattcgg ttattggtgg
    12721 tttgaaaata gcctttgctc acggtttttt cgtacccgtt ataacgcagc aaaataccaa
    12781 tccccccttt gccggggttg cctaaacaag aaccgtctgt aaaaatttca actaatttca
    12841 tcatcacgct ttgaaaataa aagccccaaa gcattaactt tggggcagct tttaggctaa
    12901 attctaaaag ttatcagaat ggagatcaac tgattatttt tttccaagtt gtggaatcac
    12961 gctattatta gccgccaata aacctgcatc ggtataaact gctaatttac cacgggtatc
    13021 gacaatatct aagttacgca ttgttaattg accgatacga tctgccggcg taaacggtgc
    13081 atcttctact ttttccatac ttaaacgttc tgcttcgtag gttaagtttg gcgattcagt
    13141 gttaagaata gtgaaatcgt taccacggcg taactcaagc gtgaccgtac cggtaatcgc
    13201 ttttgccacc caacgttgag ccgtttcacg caacattaaa gcttgcgggt caaaccagcg
    13261 gccttgatac aataaacgcc ctaaacgtaa tccgttaatg cgatattgct caatcgtatc
    13321 ttcgttgtga ataccggtaa ctaaacgctc gtaagcgatg tgtaataatg ccattcccgg
    13381 tgcttcataa ataccacgag atttcgcttc gataatacgg ttttcgattt ggtctgacat
    13441 tcccaaacca tgtctgccac caatgcggtt agcctccata attaattcaa cggcatcatc
    13501 aatacgttta ccgtttaacg ccaccggcac accttcttca aaggtaacag aaacagtttc
    13561 cgctttaatt tcaactgatt cgtcccagaa tgccacgccc ataatcggtt ttacgatctt
    13621 cataccggtg cttaattctt ctaaatcttt cgcttcgtgg gttgcaccta acatattcga
    13681 gtctgtagag taggcttttt ccaccgacat tttatagtca aaaccgtttt cgattaagaa
    13741 tttagacatt tccaagcgac cgcctaattc atcaatgaat agttggtcta accacggctt
    13801 ataaattttt aattttggat tggttaataa accgtaacga tagaaacgct caatatcgtt
    13861 acctttaaag gttgaaccat cgccccagat attcacatca tcttctttca ttgccgcaac
    13921 caacattgtg ccggttaccg cacgaccaag tggcgtggtg ttgaaatacg gaataccgcc
    13981 ggttgaaata tggaaagcac cgcattgaat tgcggcaatg ccttcgtgag ctaactgttg
    14041 gcgacagtcg attaatcgtg cattttcagc cccatattcc atcgcttttt tcggaattgc
    14101 gttgtaatca tcttcatccg gctgacctaa atttgcggtg tacgcataag gcactgcccc
    14161 ttttttacgc atccataaca gtgctgctga ggtatctaaa ccgcctgaaa aggcgatacc
    14221 cactttctgc cctaaaggta aagcttctaa aattgttgct gacatacgaa ttcctataaa
    14281 ttttgaaagt aaaaatattc aaacgcaaac gcttacgttc aagcaaaata ttctagctga
    14341 aaagtagtaa aaattcatct aaaatttagc ccgatgattt gcaaattttt tgtgaaattt
    14401 gaccgcttat aatttactga aaacctaaaa gcaatagaga aaatcagaat gaaaaaacta
    14461 ctcgtaatcc gtaatgataa aattggggac tttatggtct gctttccggc atttgctatg
    14521 ttgaagcaat caatgccgaa tgtggaaatt accgctcttg tgccaagtta tactgctcca
    14581 cttgccgagc tttgcccttc tattgataag attattattg atacggcgaa taaaaaagat
    14641 aaaaatgaat ttaaccgtat tttacaagcg gttaaaaatg agcaatttga tgcggttatt
    14701 tgttttgttt cagactggca taatgccaaa ctcacctggc aaagtgggat taaataccgc
    14761 ctcgctccag caactaaatt attccaattt ttatataacc accgtttaac ccaacgccgt
    14821 tctcaatcag caaaagcgga atccgaatat aatttggatt tagcccgtgc ttttttaagc
    14881 aaacacaata taccgattgt tgaacctcac acgccatact taagtgttga acagcaaacc
    14941 gtccaggcac aaaaagcaaa attatgcgaa caactcaata ttaccaccgt taaaaagtgg
    15001 gtatttgtgc atagttcaac cggtggttcg gcaaataatt tatctataga acagtatgca
    15061 gagttaattc aaggtatttt ggcagaattt gattgctatg tggtactcac cgcagggaaa
    15121 ggcgaaagcg aaaaagctca gcagttagct caacaaatca atcacaacaa cgtggtggtt
    15181 tatgataaaa atgaggggtt acaagatttt acacattcgc ttgcgtgtgc agatttgttt
    15241 attgccggct caaccggtcc gttacatatt agtggggcgt taaatattcc aactattggc
    15301 ttctacccga gccgactttc tgccattcca cgccgttgga aaccgattaa tgatgcgaat
    15361 aaacacattg cattttgccc accgtctgat aaagcctcac aaatgaattt aactttaatt
    15421 tctatttctg aggcattaaa aacgatagta ccgtttattc ggagaatgtg gaatactccc
    15481 tctctctgat aaaattgcta aacgcaattt tatctatctc tctcccacta gagggagaga
    15541 gtactgaaaa gcatcatttc cgagtacgat tccacaaatc cgcatatttt acgaaagtag
    15601 aatgtgccga aagaactgcc aataaaaatc cttgcttgcc atctaaaaaa ccggctttta
    15661 atagatacat tttcacaaaa cagccgatgg cgtgagtcac gccatcaaat aagctggctg
    15721 ttttgcctgc atttgcccgt tggattgccc acgctttagc gtaacttgcc gattttacca
    15781 aatagtggtg aatatcttta taggtgaaat gcagcaaatc gccttgtagt ttctggattt
    15841 ttgcctcttt tgggtaatgt actttttcgt gaaccaattc atcaccatat ttggcaaatt
    15901 ccgtgcgata caatctcacc acacaatccg gataccaacc cgagtggcga atttgtttgc
    15961 caaatacttc acttaagcgg ctgattttgt aaacggtatt tttttcatca tttttgaccg
    16021 cttgtaaaat agattgcttc agttcggctg tcactcgctc atctgcatca agccaaagta
    16081 cataatcact ggtcacatat tgttgagcta actgacgctg tttaccaaag ccttgccaat
    16141 cggtgttagt gtagaacctt gcgttgtatt cagcagcaat ttgtggtgtt tcatcagtac
    16201 tgccactatc taaaatcaca atttcatcta cccaatcttt tactgtgtca aggcaagccc
    16261 gtaaatcttg agcttcattt ttgacaatca tcgcaacact taatgtcggc atagtttatc
    16321 cttctctctt tttgtcgtgt gtttttctgc tattcgttgc attttacttt aaaaatagtg
    16381 gtttttgtgc tattttctac gccaaatttt atcaacaaaa caaattaacg gaaaaagaat
    16441 gtcaattaca ttaacaacca aacaaaaaca attcctaaaa ggcttggctc atcatttaag
    16501 cccagtggtg atgctggggg gtaacggctt aacagaaggc gtgttagctg aaatcgataa
    16561 cgccttagac caccacgaac tgattaaagt taaagttgcc ggggctgatc gtgaaaccaa
    16621 acaattaatt attgatgcca ttctgcgtga aactaaagcg gctgaagtac aaaccattgg
    16681 gcacatttta gtgctttacc gccaaagcga agagaaaaaa atcagcttgc caaaagcaac
    16741 taaagcgatc taattgcaaa aatatgttta aattcaaccg cttgtattca agcggttttt
    16801 tataggactt tctatgttta aaaaattctc tctttatacc cttgcaatgt tgctcattcc
    16861 tgtggtgact tggctggcaa attggcactg gtctctggca attcaatacg ctgaatttga
    16921 tttcgactac tttttatatt taatcaccga aaccggctcc gtaccttatg ccatcatcac
    16981 ctgtgtggtt ttcgccttat tactggcgag ggtggttcgc aaacgctact ctttaatttt
    17041 tgtgattacc gtgtgtgtcg cttcaatggt agccactcaa gcaatcaaaa cagcgatgaa
    17101 atcaaccttt caagagcctc gtccatttgt cactgctctt ttccaagata aaacagacga
    17161 tttttatcaa ttaacacgcg agcaacgtgg gcttgccgta atggaaaaaa tcggtgcaaa
    17221 tcaaaatttt gttaccgctc accaagccaa agaagtgggc tattctttcc catcaggcca
    17281 cactattttt gcggtttctt ggctattatt ggtggtaggt ttctgccgta atatgcgagg
    17341 acaagcggtc gttttggctc atttttttgc aatcagttgg gcggcgttaa tgctgattag
    17401 ccgcttgcgt ttaggtatgc actacccgat tgatttattc accagtagtt taattgcgtt
    17461 tctaatcaat ttagccttat ttgtgtggtt tgtgccttgg ttggaaagta aaaaatggtt
    17521 tgctaaaaag ccttaattgg caatttagcc aaatcaatat acaatacaaa ttattgaata
    17581 agtacctaaa ataaggagct tagaatggaa atgtcgatag aaaaaatagc tgaactatta
    17641 agcgataaag aaaaagatga ctatccgttt agtattgagg aaagacaatt tgccgcccag
    17701 gctagtgctg atacttggga ggcaatctta aataacacta ttcaaccttt tgacttcaaa
    17761 aaataggctt gctatgtatc aagtttttat tgcagaacca aaagacccaa acttagagaa
    17821 aggcttattg aaacacttca ttaagtctta tcttactcaa gaagaactcg atttcctgca
    17881 taaaattctc actaatttac ccaacatcag acctttttgg ggcgataccg gttacaaata
    17941 tatcgtcatt gataatgttt acttcttgta tgaagtttcc gaaagtgaaa cgaaagtcat
    18001 tctacttggc accaaattta ataataaacg gaaaactttt aattttgcga atacgaaaac
    18061 ccagcaaaaa tcaatgaaga aatggattaa tgatttagca atttataaac cgcataaaat
    18121 caatcaatcg caataagaga gcgtaattat ggcaatttat tatggcttag atgtgggcgg
    18181 cacaaaaatt gaattagccg cttttaatga aaaactagaa aaactacaca gcgaacgtgt
    18241 gccgacaccg cagacaaatt atcaagattg gctgacggca attaaaacgc tggttgagac
    18301 tgccgataca aaatttgacg aaaaaggcac tgtcgggctg ggcattccgg gctttgtaaa
    18361 ccgtgaaacc ggcattgcgg aaattaccaa tattcgagtg gctgacggca aaacgattct
    18421 gaaagattta gccgaatgtt tagggcgtga agtgcgtgcc gaaaacgatg ctaactgctt
    18481 tgccctgtct gaagcgtggg acgaaagtaa taagccttat tccaccgtat tagggttgat
    18541 tatcggcacc ggttttggcg gtggttttgt gtttgacggt aaaattcatt caggcagaat
    18601 cggaatggca ggcgaagttg ggcatatgca acttaactac cacgcactta aattgctcga
    18661 ctgggataaa gccccaattt atgaatgtgg ttgtggcaac caagcctgtt tagacaccta
    18721 tatttcaggg cggggttttg agttactgtt taatgattta gtaggagaaa aaatctcggc
    18781 gaaagcgatt atcgaacgct tctaccaaca agaaaccaaa gtggtggcat ttgtcgaaaa
    18841 atatattgag ctaatggcaa tcagtatcag caatctgatt acgattttag atccggatat
    18901 gattgtattc ggtggcggtt tatccaactt tgattatatc taccaagctc taccaaaagc
    18961 attaccaaaa cacttaatgc gttcagcgaa agtgccggtc atcaaaaaag caattcacgg
    19021 cgactcaggt ggcactcgtg gtgcagcagc attattctta aagtaatgaa caaatttgag
    19081 agagggcaag cggtcatttt taataaaaat attgcagccc tctcttttaa tttgccttac
    19141 tgcttagttt cttccggtaa tttatataac tgatttttat ataaataact gccaagcaat
    19201 gcgtgtgcta acgcctcttt tttaaacgat tccggctgtt ctttaggggt gagtttatag
    19261 ttagctttat cgtagctaaa tccttctatc ggtaaatttg gtcgcattac caccacatca
    19321 tttccccgca tcatcgcctg tgtcgcatca tattgcataa aggcacggtt tgggtcaatg
    19381 tcttgcgtta aatcataccc tatcatcgga tattgaccac ttattcccgc cacagaaagt
    19441 aatgttgtcg gcatatcgag ctgactcact aaacggttat ccgttcttgg ctgaatgtgt
    19501 tcgcctaata aaagtgccgg aatatggaag tgttgaattg gcactaaatg ctcgccaacg
    19561 gctcttgaat cgtgatctgc aatcactaaa aacaccgtat cttgccagta ctctgatttt
    19621 ttcgctaact caaagaaatg cccgatagca taatcggcat attttgccgc attatggcga
    19681 gtctgcttcg gttgttcata gagttcaatt ttgccgtccg gaaattcaaa cggatcgtgg
    19741 ttactggaac tgaataccaa actaaaaaac ggtttacctg atttgtgcag ttgattaaaa
    19801 gtttcatttg ccttatcaaa cagatcttca tcactcacgc cccaagttgc ggtaaattta
    19861 gggtttttat aatctttttc atcgataatt tgctggaaac cattaccgta gaaaaagctc
    19921 gccatattat caaaatgctt ctccccacca taaataaagg aagtatggta tccttgacgt
    19981 tttaataatt cggcaatact aaaaaagtta gtttggcttt tcgtcagttt taccacagat
    20041 cttgccggtg ttggtgtaaa accagccgtt accgcttcaa ttcctctcac cgaacgagta
    20101 cctgttgcat aaagattggt aaaataccag ccttgttctg aaagtttatc taaatttgga
    20161 gtgagatttt tccctcctag cgaaccgaca aattgagccc ctaaactttc ttctaagata
    20221 atcacaatgt ttttaggctt tccttgataa gtcgctttat tttgcgtgag ggtgggaatt
    20281 tcatctgaaa tataatctga agctggtcga ttacgaacct gcttaacaat gttgaacatt
    20341 tcctccacag acatttttcc atactgttcg gaagatttat cttcatcttt caattgctga
    20401 accgcataaa gcacggaata acctgaattt agcaccagtg aattgacaag cggatcgctt
    20461 gaaaatgcca ccattgccgg attaatccct cgatgggcaa aactggaacg cccaccaaca
    20521 aaaactattg cagcaaccaa taaagccagt agcggacgca ttttccagct cgggaaatgc
    20581 aaatttttgg ttgcccaacc cgataatttc caataaatga tgagagaaat catcgcaatg
    20641 ccaatcccac aaataacagc ccataaatgt ccgttaatca gcattgtgaa cacttctctc
    20701 ggatggacca aatactcaat gaaaagacga tttgggcgaa ggtcaaaggt ttcaataaaa
    20761 ttcggtgtgg cgacttccat aaaaagaata aatacactac cgacagttag ccaaattctt
    20821 aaaacagtct gccaaatcga acccagtaca tttttatgaa aacacaacac gctaaataat
    20881 gccggtaagc caaatagcca acatagcgaa gatatatcaa tgcgaatacc ttgtagtatt
    20941 aatggtatcc atccatcaac agcggatact cgatcagatt gccaaacgcc taacactaaa
    21001 cgggataagg tgaggataac taaattaatc ccaacaaata gtaggattgg aaatagcaca
    21061 gttcttgatt gactgcgttg gtacattttg aatctccttt taaaaaaata tcggcatatt
    21121 ataattgaat aatgacagga tcgcctactt ttatcacacc actgttttgt ggcacaaggt
    21181 gaataccgaa caccggctta cctttttcat cgcaatgctt ttcttttaag gttctaaacg
    21241 gctccgattt ggggtctaac tcaagcgtgt ttaaatcccg tgtaatcaaa atgcaacgag
    21301 tacataatgc cgctttggta aatagcactt cgccaatttg aacttgttgc cactgctctt
    21361 cttcaaatgc cacattgcca tcaatcacaa tattcgggcg aaaacgagcc atttcgagtg
    21421 gaatcggcga ccattgttgc acttgctcaa gcgattttag agacatcaaa ctcaccgggt
    21481 tgctatctgc aaaactcatt gggtgatcgg caaaattcgc aacaattcgt tggctttgcg
    21541 agccaagcca acgtagttgc acagccctac caaaaatttc actcagccat tgattgaccg
    21601 cttctgccgc cactttggca ttaaaatgtg ttccccacac ttcactactc tgctcttcca
    21661 caaaatcttg gtaaagtgca acgcattttt gaccgcttgt atgggtaatc attacccctg
    21721 tcgcaatcgg gaaagccgct agacggtata attccggatc tttacgggca gtaataaatt
    21781 tgccgttagg ctcggctagc ataaattcac ggtcaaaatt taagcctttc ggttcaacaa
    21841 atgcctgtga aacttgaata gcttgagttg attttatcgg gtaaatattg agctcggtaa
    21901 cttgcataga aaatcctcca tttggaaata ggataacaat acctgcaagc ggtcgaaaag
    21961 taaaaggaat ttgcaaatcc cttgtgagaa cggtaaactt gagcaacttt tacagcaata
    22021 ggtcagcaac aatggcaaag aaacccactc aagattttga aagcacactt aaagaattag
    22081 aagcaatcgt tacccatttg gaatccggtg atttaccgct tgaagaagcc ctcaacgaat
    22141 ttgaaactgc aatcaaatta gtgcaacaag ggcaagaacg gttacaaaaa gccgagcaac
    22201 gtattcaaat cttattaaat aaaaacgata ctgccccact tagcgattac gaaagagaat
    22261 aatcacaatg agctatctat tagcaaccga tctgactcac ctgcaacaac ggattaacca
    22321 ttttctcgct gaaaaattaa aaacaacgga tagcgttggt tcgcctttag tagaagcaat
    22381 ggcttatgcg gtattgctag gcggtaaacg ggtgcgaccg tttttaatct atgccaccgg
    22441 cagaatgctt ggtgtgccgt tggaaaaatt agatcatagt gcggcggcaa tggaggctat
    22501 tcacgcttac tcgctggttc acgatgattt accggcaatg gacgatgata gattacgccg
    22561 tggcaagcca acctgccata ttgcctttga tgaagctacc gctattttag ccggtgatgc
    22621 gttacaaagt tttgcgtttg aactgctggc aaccgatccg catttgaccg accgagaaaa
    22681 agttgttcaa gttacagaat tggcaaccgc ttccggtgca aaaggaatgt gcttagggca
    22741 aagtttggat ttgattgcgg aaaataaagc ggtgagcttg gaagagcttg aattaattca
    22801 tcgcaacaaa accggggcat tgattctatc atccgtgatg atgggattaa acctttccga
    22861 atattcgcaa aatgtagcca taaaacaacc gcttgtaaac tatgccaaag cgattggctt
    22921 agcctttcag gtgcaagatg atattttaga tgtcattggc gaaacagata aaatcggcaa
    22981 aatagtgggt tcagatgaac acttaaataa aagcacatac ccgaaattgt tgggcttaga
    23041 cggggcaaaa caaaaagccg aaatgcttta tcaaaccgct ctccattcgc tggaacagtt
    23101 gcctttcgat accaccgcat taaaagagtt agctaatttt attgttaagc gtgaaaacta
    23161 agaaaaaacc tagccgaagc taggtttttt agtgattaaa cgtgaggctg agcttccggc
    23221 aatgtgcctt caatttcata taccacatcg ccgtctttaa agaaaacata gccaccgttt
    23281 ttcattttgg tccagttttc atttttggta agtggctgag tggcaataat cgtcacttta
    23341 tcggtaattt tggtatattg actaaaatca atcgacacat catcatcacg caaggctttg
    23401 ccaaacggtg ctttacggca aacgtaatgc agattagttg tacaacgggc aatcatccaa
    23461 tgaccgttgg ataaaacaaa attaaatacc ccgtgttccg caattcttga ggtgatttgc
    23521 accacggcat caaaaatctc tttttcgctt ggtttagccg gatacatctc ttttaattcc
    23581 gacacaatac ggcaaaatgc cgcttcggaa tcggttgtac caatcggctg gtagtggcac
    23641 tcctcgcata ccccaacacc ttccactgtg ccgttatggg caaacaccca gttctcgccc
    23701 cataattcac gaatgaaggg gtgggtattt tccaaattca catcaccacg cgtagcttta
    23761 cgaatatgtg caataacatt gagcgattta atttgatatt ggctgattgc ttctgccatc
    23821 ggcgatgatg ctcccgggcg gttatcacga aaaacccgaa cccctttgcc ttcaaaaaag
    23881 gcaattccaa acccatcagt atggtgatcc gtcagcccac cccgacggcg aaatccatca
    23941 aaagaaaaag taatatcggt tggcgtatta caattcattc caagtaattg acacataatt
    24001 tgct
//
LOCUS       DANLXD010000030        23928 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.030, whole genome shotgun sequence.
ACCESSION   DANLXD010000030 DANLXD010000000
VERSION     DANLXD010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 23928)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23928)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23928
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.030"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..412)
                     /locus_tag="PXD18_000969"
     CDS             complement(<1..412)
                     /locus_tag="PXD18_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDL6301415.1"
                     /translation="MSKNRLEQILLFLKNHNIATVEQLVKVTEASPATIRRDLIKLDE
                     EGVVIRTHGGVSLNQFIPFQPTTNEKQFKQIVEKERIAEYAVSLISPGNSILLDAGTT
                     TLCIAKKIAHMPLRVITTDLHIALLLSEYKQIELI"
     gene            complement(520..1746)
                     /locus_tag="PXD18_000970"
     CDS             complement(520..1746)
                     /locus_tag="PXD18_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
                     /protein_id="HDL6301416.1"
                     /translation="MKETLLVIADDLTGANDTAVMFAESGFDTVLKTKVSALAQIHPD
                     KAQVISVSTDSRAIGEKAKELTQIAISNAIQNSIGQIYLKIDSTMRGSVKYQIEGAIK
                     AWAGLYPDVKAIICPAYPEMGRTIEAGHLYVNGVPVNETASGKDPICPVHSSSMQKLL
                     PDAQVIPCDTVDNLQASIENSEYKQIVIDAKTHEDLSMIAQVINHIGNKIIPVGSAGL
                     AQKLKNIQNQQQPERNLKLGRALIVVTSIHETSQLQVDEYISTLGGKSIVFNPSPSQL
                     INYSQSEHSLKLQLNALIRFSRDHVIIRANPAKVVNAKSANITETSKEISQHLADLSK
                     FCLDNEKFDSLILFGGDGAAALLDQMNVTEMNVQYAVVPGVPLCSIEKGNYSGITVMT
                     KSGGFGNNTLLSNIMN"
     gene            complement(1743..2741)
                     /locus_tag="PXD18_000971"
     CDS             complement(1743..2741)
                     /locus_tag="PXD18_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxygluconate permease"
                     /protein_id="HDL6301417.1"
                     /translation="MSTQTSKSIVPIYDGMNKIPGGAMVIPLILGSIIGTFFPEFLNL
                     GSFTTALFKSSAGPLIALLIFATGMQITVRSSGPVLAHTGVVLLFKTIIPALLVVILG
                     LWVGNDGVMGVSLLAMLTVVANSNGGIWLAFTGKYGDYRDKGAYVASAVNDGPFFVLL
                     FLGVSGLADIPLSLMLAAVIPLIIGMVIGNLDPKWTELMKPTGAIVIPFFAFALGTGI
                     NLQSIITGGATGIILGIVASLFTGFLVFIGYKTILRRGNQSGIGFAAGTTAGNAIITP
                     EIVAQADPTLAPFVQTATAQIAAAVLVSAILAPLFAAWVLKRQGGLEQDTIKGENL"
     gene            complement(2752..3753)
                     /gene="pdxA"
                     /locus_tag="PXD18_000972"
     CDS             complement(2752..3753)
                     /gene="pdxA"
                     /locus_tag="PXD18_000972"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HDL6301418.1"
                     /translation="MKPILGITMGDAAGIGPEVIIKALANQRIYELAHPVVIGDRKII
                     QRALPIVHSELKLRILNNLDNFVAEYGVIDILDLNNLPEDLPFAQVDPRAGKAAYEYI
                     EEAVNLAMGGKIHAIVTAPLNKEALHAGGKPFPGHTEILATLSNTKDYSMMLTSEKLN
                     VIHVTTHVQLRKACDLITKERVATVIDLAEENARILGFKEPRIAVAGLNPHSGENGMF
                     GDEDQKEIVPAIQEAQAKGFNVTGPVPPDTLFHRAANLNEFDIVVVMYHDQGHIPIKL
                     LGFDTGVNVTVGLPFIRTSVDHGTAFPIAGKGTADSRSMTEALYLGAKMANIKYATH"
     gene            4187..5551
                     /locus_tag="PXD18_000973"
     CDS             4187..5551
                     /locus_tag="PXD18_000973"
                     /EC_number="2.6.1.76"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005820549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminobutyrate--2-oxoglutarate transaminase"
                     /protein_id="HDL6301419.1"
                     /translation="MTIKTPIQAVLASNQYFLDRQDAMESNVRSYPRKLPFAYQKAQG
                     VWVTDVEGNEYLDFLAGAGTLALGHNHPKLIQAVKDVLDSGLPLHSLDITTPLKDAFT
                     EELLSFFPKDKYILQFTGPSGADANEAAIKLAKTYTGRGNVIAFSGGFHGMTHGALSL
                     TGNLSAKNAVQGLMPGVQFMPYPHEYRCPFGIGGEAGAKAVEHYFENFIEDVESGVVK
                     PAAVILEAIQGEGGVVPAPISFLQKVREVTQKHGILMIVDEVQAGFCRSGKMFAFEHA
                     GIEPDIVVMSKAIGGSLPLAVLAIKKEFDAWQPAGHTGTFRGNQLAMATGYVSLKIMR
                     EENLAKNAQERGEYLTNALRELSKELPCIGNVRGKGLMMGIDIVDERQPKDATGAYPR
                     DCDLAVAIQKYCFKNKLLLERGGRGGNVVRVLCAVNITQAECEEFIKRFKQSVAEAVK
                     AVRG"
     gene            5641..7176
                     /gene="ddc"
                     /locus_tag="PXD18_000974"
     CDS             5641..7176
                     /gene="ddc"
                     /locus_tag="PXD18_000974"
                     /EC_number="4.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-2,4-diaminobutyrate decarboxylase"
                     /protein_id="HDL6301420.1"
                     /translation="MSNLEKHRQSLFCSDPKSIADYESAMNNAVKAVSDWLKEEKMYT
                     GGSIKELRAKINGFNPTQAGVGVQKSLEHLVEIFLKPSLKVHHPHSLAHLHCPTMVTS
                     QIAEVLINATNQSMDSWDQSPAGSIMEEHLIDWLRQKVGYGKGTSGVFTSGGTQSNLM
                     GVLLARDWAIANHWKKADGSEWSVQADGIPADAMQKVKVVCSENAHFSVQKNMAMMGM
                     GFQSVVTVPSNANAQMDVEALAKTLADLKAEGKIVACIVATAGTTDAGAIDDLKAIRK
                     LADEHQAWVHVDAAWGGALLLSKDFRHFLDGIELTDSITLDFHKHFFQSISCGAFLLK
                     DEANYRFIDYKADYLNSEYDEEHGVPNLVSKSLQTTRRFDALKLWFTVEALGEELYAS
                     MIDHGVYLSKEVEAYINATDGLEMLVPAQFASVLFRVVPQGYPAEFVDTLNQNVADEL
                     FARGEANIGVTKVGEHQSLKMTTLSPIATLENVRALLAQVLAEADRIKDSIVNGTYVP
                     PID"
     gene            7279..7641
                     /locus_tag="PXD18_000975"
     CDS             7279..7641
                     /locus_tag="PXD18_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NirD/YgiW/YdeI family stress tolerance protein"
                     /protein_id="HDL6301421.1"
                     /translation="MKKVLGLTLMAMALSACNSTASNGSSQANTGVAPANVISVKQAL
                     AAADDSYVTVEGTLLNKVGDETYLFKDATGQIRVEIDDEVWAGQHVGSEGNKVRLYGE
                     IDKGFNKTELDVKTLTVL"
     gene            complement(7731..8318)
                     /locus_tag="PXD18_000976"
     CDS             complement(7731..8318)
                     /locus_tag="PXD18_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL6301422.1"
                     /translation="MNHLIIYAHPNPSSFNHAILEKTIAASVPNKVVVRDLYQLNFKP
                     ILDWAEFQGTLSKHYEADVAIEHQYWLEADVITLIYPLWWMGFPAILKGYLDRVLSYD
                     FAYRNGEIESIGLLTGKKMQQFVTLGNSNEKYERKGFLAAFEHTLGKGLFEFCGIRDV
                     KMHYFGNIGLKETDYTAILQQITASCSTILKEQAV"
     gene            8494..9042
                     /gene="napF"
                     /locus_tag="PXD18_000977"
     CDS             8494..9042
                     /gene="napF"
                     /locus_tag="PXD18_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapF"
                     /protein_id="HDL6301423.1"
                     /translation="MTDYPNQSLPRRSFLRGQFLDSLKSQKVSQQGYEPIRPPWANLA
                     NFLEKCTACGNCIQACETQIIVKGAAGYPEIDFSRGECTFCEKCVHSCEAEVFRAVSE
                     QPWSHKIEIQAGCLLKLGTECRSCGDSCEMRVIRFRPSLGGIAEMVLNLESCNGCGAC
                     LSVCPTSAIKIQPLQTQANRDE"
     gene            9035..9301
                     /locus_tag="PXD18_000978"
     CDS             9035..9301
                     /locus_tag="PXD18_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HDL6301424.1"
                     /translation="MSEKLSEQENWYVCSLVVQAKPEKLEEVKAEILKIPHTEIHGEK
                     TDEGKLVVTIESNVHLALSDRIDQVRDIKGVIVVSLISNYIDEQ"
     gene            9340..11838
                     /gene="napA"
                     /locus_tag="PXD18_000979"
     CDS             9340..11838
                     /gene="napA"
                     /locus_tag="PXD18_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005566990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase catalytic subunit NapA"
                     /protein_id="HDL6301425.1"
                     /translation="MELNRRDFMKANAAVAAAAAAGIMIPVKNVQADDTGIRWDKAPC
                     RYCGTGCSVLVGTKDGKVVATQGDPDAEVNRGLNCIKGYFLSKMMYGADRMQEPMLRM
                     KDGKFDKNGDFTPVSWDQAFSIMAEKIKTTIKNDGPNAVGMFSSGQTTIFEGYAKVKL
                     WKGGFRSNTIDPNARHCMASAAVAFMRTFGMDEPMGCYNDIEKTDAFVLWGSNMAEMH
                     PILWSRISDRRLSDNKVKVVVMSTYEHRSFELADTPIIFKPHSDLAILNYIANYIIQN
                     DKVNWDFVNKHTKFKRGETNIGYGLRPEHKLQQNTNAKTAGKMYDSDFEEFKKIVAPY
                     TLEEAHRISGVPKDQLETLAKLYADPNQKLVSFWTMGFNQHTRGVWVNHMMYNVHLLT
                     GKIALEGCGPFSLTGQPSACGTAREVGTFIHRLPADMVVTNPKHREIVENSWKLPAGA
                     IPDVPGFHATAQSRALKDGKMKFLWQMCTNNMQGGPNINEEIFPGWRNPETFIVVSDP
                     YPSVSAVAADLILPTCMWVEKEGAYGNAERRTQFWRQQVKGPANARSDTWQLVEFSKY
                     FKVEEVWPEELLAKAPELRGKTLYEILYRNGKVDSYQVPTNIPGYMNDEADHFGYYIQ
                     KGLFEEYAEFGRGHGHDLADFDTYHKVRGLRWPVVKDEKTGEYKETLWRYREGYDPYV
                     KAGEEVAFYGNADKKAVILGVPYEPPAEAPDEEYDLWFCTGRVLEHWHTGTMTRRVPE
                     LHKAFPTNLVWMHPNDAKKRGLRHGDKVKVISRRGEYVSNLDTRGRNKCPEGLIYSTF
                     FDAGQLINKVTLDATDPISFETDFKKCAVKVVKA"
     gene            11927..12832
                     /gene="napG"
                     /locus_tag="PXD18_000980"
     CDS             11927..12832
                     /gene="napG"
                     /locus_tag="PXD18_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HDL6301426.1"
                     /translation="MKMDPNRRQFLKNATRTAAGVCGVGMILGLQQQQSFARQGVALR
                     PPGALPEQDFLSACTRCGQCVQACPYDMLHLASLISPVEAGTPYFIARDKPCEMCLDI
                     PCMNACPTGALSEELKDIDDARMGLAVLLDHETCLNWQGLRCDVCYRVCPLIDKAITL
                     EKVHNDRTSIHAKLIPTVHSDACTGCGKCEQACVLEEAAIKVLPMDLAKGLLGRHYRL
                     GWQEKQNAGKSLIEDVHPEGLRPAYDARMPEGLHEPVYQHMEVKPDVKVATPSRATQN
                     YVPNSTTVEAPEHFPDLDLNLKGVK"
     gene            12832..13710
                     /gene="napH"
                     /locus_tag="PXD18_000981"
     CDS             12832..13710
                     /gene="napH"
                     /locus_tag="PXD18_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HDL6301427.1"
                     /translation="MAANSPKNAGLEARQKLGWWHAYRFLILRRLSQLSIILMFLSGP
                     LWNVWILKGNYSGSLLLDTVPMTDPLMTAEVLATGYRPEWTVLVGALIMVAFYGIVGS
                     KLFCSWVCPMNMVTDTAAWLRRKLGIRQTAKIPRNLRYVILAVILVGSAISGTLLWEW
                     INPVAALGRVFVFGLGATLWLVLVVFLFDLLVAEHGWCGHLCPIGATYALIGAKSLIK
                     VKVVDRNRCDNCMDCYNVCPEPQVLRVPLHGKPEESTVILSKDCITCGRCIDVCAENV
                     FAFGMRFQGSIDVKNI"
     gene            13756..14184
                     /locus_tag="PXD18_000982"
     CDS             13756..14184
                     /locus_tag="PXD18_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HDL6301428.1"
                     /translation="MRKYLAFILAVMSGFAMAEAPKLSGSIDETTESVAPGFHNPQKD
                     VGTIPTTFPFQPPLVPHSIRGLQVSKNVNHCLGCHAIEPSKTTGATRLPPSHFTDRDG
                     KVYENESPRRYFCLQCHVQQTDVNPIIQNKFESVRESQAK"
     gene            14195..14803
                     /locus_tag="PXD18_000983"
     CDS             14195..14803
                     /locus_tag="PXD18_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HDL6301429.1"
                     /translation="MLRRFCNWLRSPSKMAIGAVILISALGGIFAWSGFNAGLAMTNT
                     EEFCSDCHMNDVVPEYRASAHYSNRSGVKAICSDCHVPHEFFPKWQRKIIAAKEVYAH
                     FTGKVDTKEKFEAHRGEMAEREWARMKANSSQECRNCHNFDDMDFTQQKNIAQQMHAL
                     AQEQGKTCIDCHKGIAHNLPHMEAIQKNFIPDDLLKKAEEKK"
     gene            complement(14865..15707)
                     /gene="cpdA"
                     /locus_tag="PXD18_000984"
     CDS             complement(14865..15707)
                     /gene="cpdA"
                     /locus_tag="PXD18_000984"
                     /EC_number="3.1.4.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-AMP phosphodiesterase"
                     /protein_id="HDL6301430.1"
                     /translation="MDAKRMHEYIKLPVTGVIKLLQITDPHLFSNPEETLLNVKTVKS
                     FSAVIEQINKQAKQYFDLVLATGDLIQDNNIAGYHYFAQITNSLNSPIVWLEGNHDVQ
                     PSMSEILAQYKHILPHKQILLGEQWQLLMLNTQVVGMPYGELSYSQLKWLEEKLAQYP
                     QRFTLVALHHNILPTNSAWLDQHSLKNSNELSEIFAKFKNVKAIVHGHIHQQVDDIWH
                     GIPIYATPSTCIQFKPNCDQFTLDLQPQGWREIELHENGTIETVVKRLNSNDFLPNVN
                     AIGY"
     gene            15997..16131
                     /locus_tag="PXD18_000985"
     CDS             15997..16131
                     /locus_tag="PXD18_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/trimethylamine N-oxide reductase
                     NapE/TorE"
                     /protein_id="HDL6301431.1"
                     /translation="MRSELLKTLLLSGLILPLLMAFAVGAYGFIVWMLQLFVIGLPGA
                     "
     gene            16135..17298
                     /gene="torC"
                     /locus_tag="PXD18_000986"
     CDS             16135..17298
                     /gene="torC"
                     /locus_tag="PXD18_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentaheme c-type cytochrome TorC"
                     /protein_id="HDL6301432.1"
                     /translation="MLGSIKALFTRPATKIGLGVLVGIGFIAGAISWHQFNKAMDHTS
                     TEEFCVSCHSMQQPLEELKKTAHWSNKSGVTATCSSCHLPHDYTEKYARKVQASREAW
                     AELSGKYKEEGSFEKHRLEMAEREWARFAANGSKECKACHSYERMNFDKMGEAARKAM
                     KPAAEKDQSCMDCHKGIAHHLPKADENALKSKFDQFVNKSPNQGKSYYTKGNAELFLD
                     EGLSQAIGQLETAVPVAFVQAGKNADLVELTMWRKEKGFGRIWYHDFGKNITDAVLTK
                     EFMANQPKFEVLETKEDPITGLNWQKVKLQAWIGKAQLLDDVTPIWANAENQYKTQCS
                     TCHRQPDVAHFDSNSWIGLFNGMVGFTNMDKQTGKEVLRYLQMHASDSEEAKH"
     gene            17398..19863
                     /gene="torA"
                     /locus_tag="PXD18_000987"
     CDS             17398..19863
                     /gene="torA"
                     /locus_tag="PXD18_000987"
                     /EC_number="1.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
                     /protein_id="HDL6301433.1"
                     /translation="MQQSRRQFLKNMSVMAAAVTMPNFLVPRNVFASEDLSQWKVSGS
                     HWGAMRAKIENGRVAEIKPFEFDKHPTEMLNGIKGLIYSDSRIRYPMVRLDWLKNRHN
                     SNTAQRGDNRFVRVTWDEALDLFYQELERVQKEYGPWALHTANVGWRSTGQFHSCGNH
                     MIRAIAMHGNSVGTAGDYSTGAGQTILPYVLGSTEVYSQGTSWEIILKESENIIFWAS
                     DPVKNLQVGWNCETHEAYAYLEKLKEKVAAKGVNVICVDPVKSKTQNFLGCEQQYINP
                     QTDVPFMLALAHTLYTENLYDKKFLDMYTVGFEKFLPYLLGETEDKVAKTPEWAAEIC
                     GISADKIREFARMLAGKRTQFIFGWAIQRQQHGEQPYWMGAVLASMLGQIGLEGGGIS
                     YAHHYSSIGIPESGAAMPGAFPLNIDEGQTPKYDNKDYKGYSDTIPVARMTDSLLHAG
                     ETIDYNGKKVTYAPFKMAIFTGCNQWHRHSERNKMKQAFQKLETIVSINYSWTATCRF
                     SDIVLPACTPFERNDIDAYGSYSNRGVIAMHKLVDPLYDSRSDFEIFRDLCRRFGKEK
                     EYSRGMDEMQWVEKLYKDCRRENRGKFEMPEFAEFWQKGYVLFPEGKPWVRHADFRED
                     PELHALGTPSGFIEIYSNKIASFGYDDCKGHPMWFEKAERSHGGKNSDKFPYWLQSVH
                     PDKRLHSQLCESKELRETYSVQGREPLYINPQDAAKHGIQDGDLVRVFNDRGQAIVGA
                     VLSDNFPTGVVRLQEGAWYSPLDESVGAIDTYGDPNTMTLDIGTSKLAQAVSANTCLV
                     NIEKFIGNAPAPNGFNGAIEVTA"
     gene            19863..20453
                     /gene="torD"
                     /locus_tag="PXD18_000988"
     CDS             19863..20453
                     /gene="torD"
                     /locus_tag="PXD18_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD"
                     /protein_id="HDL6301434.1"
                     /translation="MTLAISREERQFIYGWFNAMLARELSDEQLNALQAGEFDDFFAY
                     LSELGFAEQVAKFQAEVTACRQLEFPRLELAADFAQLFLLEGNLSAIPYASAYLSGEA
                     LAKNLAEMDRLLGEFGLQVNRETKEPSDHLCVYLTLFDRLLAEKPLETQQQFLQNQLM
                     SWLPAWFAKAKTVKTNTGVYPALLRLFEQVLLKEQR"
     gene            20593..21282
                     /locus_tag="PXD18_000989"
     CDS             20593..21282
                     /locus_tag="PXD18_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDL6301435.1"
                     /translation="MQNNKTTYLNWYDLCVLTLILFGEAIYTSTQQYFITTEMQGNFE
                     ENLTFSNEQNYWALLTQLALLLIAMGYLKWRNFDFSRWVIRPSWLAFFSGIGLFILLS
                     LAMDLYFETLYGVYNLVYPEPFWAVLREVNISTVLYAILNGFYEEIFFLGICLAVKPE
                     YLKWAVIYSLIIRVSFHTYQGMESALGLGIWLGLIIYLLYSRSKQKNLFPFWVAHSIA
                     DILGLSLLAYF"
     gene            21440..22318
                     /locus_tag="PXD18_000990"
     CDS             21440..22318
                     /locus_tag="PXD18_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HDL6301436.1"
                     /translation="MKSIKKLTLATLILVGLTACGSGGSGSSSNNAKSKPQVELKKTE
                     EDKKTEEDKKTEEDKKTEEDKKTEEDKKTEEDKKTEEDKKTEEDKKAEEAKKIAEAKG
                     IGNKEYKDGLNELEEKNETGKNGEEIRTHGYLYNSHYSVVTAKMKQTLQENGRQMEPT
                     VEVKGLKTENLPTEGKATYKGEAFDSHGNNSNSVVGGELIYNVDFSSRTGSGLVKNVQ
                     GGSIELAQGEIKNDSIIASAHQKYNDQAVGNGSYNIQFFGPNAEEIGGKIELNGEGEG
                     SMKQMLGIAGTREEQK"
     gene            22367..23761
                     /locus_tag="PXD18_000991"
     CDS             22367..23761
                     /locus_tag="PXD18_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL6301437.1"
                     /translation="MYKKHFLFLLVSPLVMAETVEFQQDPKEFDGQRQAVKFEQEIAK
                     KDLKLTAYLEEDNSLKGIEQHINQAILRQDWAKLERLLGDYAKQEQFDPLLLDYALAA
                     LAYAKKDYRSAAFYYQQLLKKQPDLTYPRFDLALILKEDYRYREAEQEFKQLKTDDLR
                     NAVNSALAQIEEEESWKPDFYLQYTQTNNVNNASSSPTVNVNGRIFIKESDSLPQSAK
                     GVRYGVGLSKMRNIGGNHFVGVDLGYNGVYYWNNHDYSEQSVSLTPKYSYRTATYRIG
                     VSPFIEQNWLGSSRYNYQFGSSINAVKLFERGLISGSFSHLQKRYSEQHIADRYNGYR
                     NQLTLGTQWQAVKNWRFFANLNASREITREKAQSSNKWLATIGVIYQTPSWASSVSVG
                     YGKRYFADKHYLFGYKRQDKEYQANVAVWNRSWHWQGIVPKLNFRYQKIDSNIADFYS
                     RSNKEVFMTLEKLF"
BASE COUNT         7194 a         4699 c         5361 g         6674 t
ORIGIN      
        1 taattaattc tatttgctta tattcagaga gtaataaagc aatatgtaga tcagttgtaa
       61 tcactcgaag tggcatatga gcgatttttt tcgcaatgca tagcgttgta gtgccagcat
      121 ctaataaaat agaatttccc ggtgaaataa gcgaaacggc atattcagct atgcgttctt
      181 tttcgacaat ttgcttaaat tgcttctcat ttgttgttgg ttgaaacggt ataaattggt
      241 ttaagctgac ccctccgtgt gtgcgaatca cgacgccttc ttcatctaat tttattaaat
      301 cacggcggat agttgcagga gaagcctcag tcacttttac cagttgctct acggtagcaa
      361 tattgtggtt ttttaggaat agtaaaattt gttctagacg gtttttagac atataaactc
      421 tctaattttt aactgctttt actataagta attttttaaa aataagatag ttaaaattaa
      481 agaacctaaa acattgttgc tttaggttct ttgttgttac tagttcatta tattgcttaa
      541 gagtgtgttg tttccaaatc ctccagattt agtcattaca gtgatgcctg agtagttgcc
      601 cttttcaatg gagcataaag gaacgcccgg tactaccgca tattgtacat tcatctctgt
      661 tacattcatt tgatctaata atgctgctgc accatctcca ccaaataata taaggctatc
      721 aaatttttca ttatcaaggc agaatttact taaatcagct aaatgttgag aaatttcttt
      781 agaagtttcc gtgatattgg cagattttgc atttacaact tttgcagggt ttgcccgaat
      841 aataacatga tctctactaa aacgtattag agcgtttaat tgtagtttca gtgaatgttc
      901 tgattgcgag tagttaatca actgtgaagg cgaaggatta aatacaatag attttcctcc
      961 taaagttgaa atatattcat caacttgcag ttggcttgtt tcgtgaattg aggttacgac
     1021 aattaatgct ctacctaatt taagatttcg ctctggttgt tgttgatttt ggatattttt
     1081 caacttctgt gccaatccgg ctgagccaac aggaataatt ttattaccta tgtgatttat
     1141 gacttgggca atcattgaga gatcttcgtg cgttttagca tcaataacga tctgtttata
     1201 ttcactattt tcaatagatg cctgcaaatt atcgaccgta tcacacggga ttacttgagc
     1261 atcaggcaat agtttttgca tagaagatga atgcacaggg cagataggat cttttcctga
     1321 agcagtttca tttacaggaa caccattaac atataaatga ccagcttcta tagttcttcc
     1381 catttctgga tatgcaggac aaataattgc tttaacatcg ggatataaac cagcccaagc
     1441 tttaatagca ccttcaatct gatatttaac agagcctctc attgtggaat caattttaag
     1501 gtaaatttgc ccgatactat tttgaatagc attgctaatt gcaatttgag tcagctcttt
     1561 tgctttctct ccaattgctc ttgaatctgt agaaacagaa attacttggg ctttatcagg
     1621 atgaatttgg gctaatgccg aaactttagt ttttaagaca gtgtcaaatc ctgattcagc
     1681 aaacataacc gcggtatcat ttgcaccagt aaggtcatca gcaataacta agagtgtctc
     1741 tttcatagat tttctccttt tatagtgtct tgttctaagc caccttgacg ttttaaaacc
     1801 cacgctgcaa ataatggagc taagattgct gaaactaata cagctgcggc aatctgtgca
     1861 gtcgcagttt gaacaaaagg tgctaatgta gggtctgctt gagcaacaat ttcaggtgta
     1921 ataatggcat ttccagcagt agttcctgct gcaaacccga ttcctgattg attaccacgt
     1981 cttaaaattg ttttgtaacc gataaataca agaaaacctg taaagagaga agctacgata
     2041 cctaaaataa ttcctgttgc tcctccagta ataatagatt gcagattgat tcctgttcct
     2101 aatgcaaaag caaagaaagg aatgactatt gcacctgttg gtttcattaa ctctgtccat
     2161 ttaggatcta agttaccaat aaccatacca ataataagag gaataacagc tgcaagcatt
     2221 aatgaaagag gaatatctgc taatcctgat acacctaaaa atagtaaaac aaagaaaggt
     2281 ccatcattaa cagccgaagc gacataagct cctttatctc tataatcacc atatttccct
     2341 gtaaacgcta accaaatacc accatttgaa tttgcaacaa cagttagcat agctaataaa
     2401 gaaacgccca taacaccatc attacctacc cataatccta aaatcacaac taaaagagcg
     2461 ggaataatag ttttaaatag taatacaaca ccggtatggg caagtacagg tccagaactt
     2521 ctcacggtaa tttgcatacc tgtagcgaaa attaatagtg caataagtgg tcctgctgat
     2581 gatttgaata aagccgtcgt aaatgaacct aaatttaaaa attcaggaaa gaatgtacca
     2641 ataatagaac caagaattag cggtattacc attgcaccgc caggaatttt attcatacca
     2701 tcatatatcg ggacgatgga tttagatgtt tgagtagaca tattaatctc cttagtgtgt
     2761 cgcatatttg atatttgcca tttttgcacc caaatagagt gcttcagtca tactacgact
     2821 atctgctgtt cctttgcctg ctattgggaa agcagttccg tgatcgacag atgttcgaat
     2881 aaatggaaga ccgacagtaa cgtttacacc tgtatcaaag cctaataatt tgatagggat
     2941 atgcccttga tcgtgataca tcacaacaac aatatcgaat tcatttaggt tagctgcacg
     3001 gtgaaataaa gtatccggag ggacaggccc tgtaacatta aaccctttgg cttgagcctc
     3061 ttgaattgcg ggaacaattt ctttttgatc ttcatcgcca aacattccat tttcacctga
     3121 atgaggattt aaaccagcga ctgcaatacg aggttcttta aacccaagaa tgcgagcatt
     3181 ttcttctgct aaatcaataa ctgtagcaac tcgttctttg gtaattaaat cacaggcttt
     3241 acgaagttgg acgtgagtag taacgtgaat aacattgagt ttttcactgg ttagcatcat
     3301 tgagtaatct ttagtattac tgagggttgc aaggatctct gtatggccag gaaatggttt
     3361 accacctgcg tgtagggctt ctttattcag tggtgctgta acaatagcgt ggatttttcc
     3421 tcccattgct aaattaactg cctcttcaat atattcataa gctgcttttc cagcacgcgg
     3481 atcaacttga gcaaaaggca aatcttcagg caggttattc aaatctaaaa tatcaataac
     3541 gccatattcg gctacaaagt tatctagatt attgagaatt cttaatttca attctgaatg
     3601 aacaataggt aaggctcgtt gtataatttt tcgatcaccg atcacaacag ggtgtgctaa
     3661 ctcataaatc cgttgattag ctaatgcttt aataataact tctggtccga taccggcggc
     3721 atctcccatc gtaattccca atataggttt catatttact ccttgattga aattaatcat
     3781 tttgaacgaa gtatagctta tatgaaatca taaaagtgtg ataaacatca caaaagtgaa
     3841 cttttttaat cttattgatt taatttaatc aattttaagg tggtaaattg gatagggtat
     3901 gaaagtgaaa ggcatttatt gctagataaa agcttccctt ttcaataaaa aagagtatca
     3961 tacgctctct taaacgtaac cctacattta agtctgtttc caacctatcc caatttcttt
     4021 attccttagg ggcatatagg gtaaaaacaa aaaagctgaa acgctttttt taataagtag
     4081 cgagtcaaat gccccatggc atctattctt ttaggaatag aaagcttagg ctttccgcaa
     4141 ggcacccgac ttattttttt cacctcttgt agaaggttta ttttcaatga caattaaaac
     4201 tcctattcaa gccgttcttg cttcaaacca atatttttta gatcgccaag atgcaatgga
     4261 atcaaacgtg cgtagctacc cacgtaaatt accttttgct taccaaaaag cacaaggcgt
     4321 ttgggtaact gatgttgaag gcaatgaata cctcgatttc ctagcaggtg caggaacgct
     4381 tgcattaggt cataaccacc ctaaattaat ccaagcagtt aaagatgtat tagacagtgg
     4441 tttaccttta cactcgttag atattacgac tccgttaaaa gatgctttta cggaagaatt
     4501 actctctttc tttccaaaag ataaatatat cctccaattt actggcccgt ctggtgcaga
     4561 tgctaacgaa gcggcaatta aattagccaa aacctacact ggtcgtggca acgtaattgc
     4621 tttctccggt ggtttccacg gaatgaccca tggtgcgtta tcgctcaccg gtaatttaag
     4681 tgcgaaaaat gcagtacaag gcttaatgcc gggcgtacag tttatgcctt atccgcacga
     4741 ataccgctgt ccgtttggca ttggtggcga agccggtgca aaagcagttg aacattattt
     4801 tgagaacttt attgaagatg ttgaaagtgg tgtggtaaaa ccggcagcgg tgatccttga
     4861 agccattcaa ggtgaaggcg gtgtggttcc ggctccaatc agcttcttac aaaaagtgcg
     4921 tgaagtcact caaaaacacg gcatcttaat gattgtggac gaagttcaag ctggtttctg
     4981 ccgttcaggg aaaatgtttg cctttgaaca cgcaggcatt gagccggata tcgtagtaat
     5041 gtcaaaagcg attggtggta gcttaccgct tgcggtatta gcgatcaaaa aagagtttga
     5101 cgcttggcaa ccggcaggtc ataccggtac attccgtggt aaccaattag caatggcaac
     5161 cggctatgta tcgcttaaaa ttatgcgtga agagaattta gcgaaaaacg cacaagagcg
     5221 tggcgaatac ttaactaacg cattacgtga attaagcaaa gaattacctt gtattggcaa
     5281 tgtgcgtggt aaaggcttaa tgatgggaat tgatattgtt gatgaacgtc agccaaaaga
     5341 tgcaacaggt gcatacccgc gtgattgcga tttagccgtt gcaattcaaa aatactgctt
     5401 taaaaacaaa ttgttattag agcgtggcgg acgtggcggt aatgtggtgc gtgttctttg
     5461 tgccgtgaat attacccaag cagaatgtga agagtttatt aaacgcttta aacaatctgt
     5521 tgctgaagca gtgaaagcgg tgcgtggtta atagttagaa tggtaggagc gaaacatttt
     5581 tcgccctaat gtaaaaaggg gcgaatattt attcgcccct acaccaatag gatagaaata
     5641 atgtcaaacc tagaaaaaca cagacaatcc ctgttttgta gcgatccaaa atcgattgcg
     5701 gattatgaat cggcaatgaa taacgctgtg aaagcggttt cagactggct gaaagaagaa
     5761 aaaatgtaca ccggtggctc aattaaagag ttgcgtgcca aaatcaacgg ttttaaccca
     5821 acccaagctg gtgtgggcgt gcaaaaatca ctggagcatt tggtggaaat tttcttaaag
     5881 ccaagcctca aagttcacca ccctcattct ttggcccact tacattgccc gacaatggta
     5941 accagccaaa ttgcagaagt gttaattaat gccaccaacc aatcaatgga ctcttgggat
     6001 caaagcccgg caggttcgat tatggaagag catttaattg actggctacg tcaaaaagtc
     6061 ggctatggca aaggaacttc aggagtcttt acctcaggtg gtacgcaatc aaacctgatg
     6121 ggcgtattat tggctcgtga ctgggcgata gcgaaccatt ggaaaaaggc agacggttca
     6181 gagtggtcgg tgcaagccga cggtattcct gccgatgcaa tgcaaaaagt gaaagtggtt
     6241 tgttccgaaa acgctcactt ctcggtgcag aaaaatatgg caatgatggg aatgggtttc
     6301 caatcggtag tgactgtacc gtcaaatgcc aatgcacaaa tggacgttga agctcttgcg
     6361 aaaacgttgg cggatttaaa agccgaaggc aaaattgtgg cttgtatcgt cgcaaccgca
     6421 gggacgaccg atgccggtgc gattgatgat ttaaaagcga tccgtaaatt agccgatgaa
     6481 catcaggctt gggttcacgt tgatgctgct tggggtggtg cattattact gtcgaaagat
     6541 ttccgccact tcttagacgg cattgaatta accgattcca ttacccttga tttccacaag
     6601 catttcttcc aatcaatttc gtgtggggca ttcttgctaa aagatgaagc gaattaccgc
     6661 tttattgatt acaaggcaga ctacctgaat tcagaatatg acgaagaaca cggcgtgccg
     6721 aatttagtgt caaaatcatt gcaaactacc cgccgttttg atgcgttaaa attatggttt
     6781 accgttgaag ccttgggtga ggagctatac gcttcaatga tcgaccacgg ggtttatctt
     6841 tctaaagaag tggaagccta cattaatgcc accgatggct tggaaatgtt agtgccggca
     6901 caatttgcct cagtcttatt ccgtgtcgta ccacaaggtt acccggcaga atttgtggat
     6961 accttaaacc aaaatgtggc agatgagtta tttgctcgtg gcgaagctaa cattggtgtg
     7021 accaaagtcg gtgagcatca atcactgaaa atgactactt taagcccgat tgcaacgctt
     7081 gaaaacgtaa gagcattatt agctcaggtg ttggcagaag cagatcggat taaagattcg
     7141 attgtaaatg gaacttatgt tccgccaatt gattaaactg cgttaaaaat aaaaaggtgt
     7201 tttcgacatt tatttgtgtt ttaatgtttg cattcggtag tctttatcga atgcaaattt
     7261 ttttaacaag gagtttttat gaaaaaagtc ctgggtttaa cattgatggc aatggcgtta
     7321 tcggcgtgta attcaactgc ttccaacggt tcttcacaag caaatacagg tgttgcaccg
     7381 gcgaatgtga ttagcgtgaa acaggcgtta gcggcagcag atgacagcta cgtgacggta
     7441 gaaggcacac tcttaaacaa agtcggtgac gaaacttact tatttaaaga tgcgacaggg
     7501 caaatccgtg ttgagattga cgatgaagta tgggcaggtc agcacgttgg tagcgaaggc
     7561 aataaagtcc gtttatacgg agagattgac aaaggtttca ataaaaccga gttagatgtt
     7621 aaaacactca ctgttctgta gaagatcaaa ccttaatttg gttccccgcc ttgtttggcg
     7681 gggtttttac gttaattaat caaaccatcc ttttgcaaaa aaacgcaaaa ttataccgct
     7741 tgttccttca atattgtgct acaagatgct gtgatttgct gcaaaatagc ggtgtaatca
     7801 gtctctttta aaccaatatt accgaaatag tgcattttta catcacgaat cccacagaac
     7861 tcaaacagcc cttttcccag cgtatgttca aatgctgcta aaaagccttt tcgttcatat
     7921 ttttcattgg aattaccgag cgttacaaat tgttgcattt ttttgccggt cagcaagccg
     7981 atactttcaa tttccccgtt acgataggca aaatcataac ttaacaccct gtctaaatag
     8041 ccttttaaaa ttgccggaaa gcccatccac caaagcgggt aaattaacgt aatcacatca
     8101 gcttcaagcc aatattgatg ctcaattgcc acatctgctt catagtgttt actgagtgtg
     8161 ccttgaaatt ccgcccagtc taatatcggc ttgaagttga gttggtagag atctcgtaca
     8221 accaccttat ttggaacgga agctgctatc gttttttcca aaatcgcatg gttaaagctg
     8281 gagggattcg ggtgtgcgta aataatcagg tgattcatag cgttttcctt tactgtgtcg
     8341 aggcagctac tagaagattt tagcgaaact ttctttgatg aaaatcaata ttttggcgaa
     8401 tataccggca aataccccgt ttgaggaatg aacggtttta agtgaacatt agataattta
     8461 gcctattata gtgatgagta aaaaggtgtt ttcttgactg attatcctaa tcaatcactt
     8521 cctcgccgta gctttttgcg agggcaattt ttagactcgt taaaaagcca aaaagtcagt
     8581 cagcaagggt atgagccgat tcgtccgcct tgggctaatt tagcaaattt tttagaaaaa
     8641 tgcaccgctt gcggtaactg cattcaggct tgcgaaaccc agattattgt aaaaggtgct
     8701 gcgggctacc ctgaaattga ttttagccgt ggtgaatgca ctttttgtga aaaatgtgtg
     8761 cattcttgcg aggcagaggt attccgagca gtttcagaac agccttggag ccataaaatt
     8821 gagattcaag ccggctgttt attaaagctc ggaacggaat gccgaagctg tggcgatagc
     8881 tgtgagatga gagtgattcg tttccgcccg agtttaggtg gcattgccga aatggtatta
     8941 aatttggaaa gctgtaatgg ctgtggggct tgtttgagcg tttgtccgac aagtgcgata
     9001 aaaattcagc cattacaaac acaggcaaac agagatgagt gaaaaattat ccgaacagga
     9061 aaactggtat gtgtgcagtc tcgtggtgca agcaaaaccg gaaaaattgg aagaagtaaa
     9121 agccgagatt ctgaagattc ctcataccga aattcacggt gagaaaacag atgaaggcaa
     9181 attggtcgtg acgattgaaa gcaatgtgca tttagccctt tccgatcgaa tcgatcaagt
     9241 aagagatatt aaaggcgtga ttgtggtgtc tttaatttct aattacattg atgaacagtg
     9301 attaatgatt atttttgaag ccaaacgtgg gacatagtta tggaactcaa tcgtagagat
     9361 tttatgaaag cgaacgccgc tgtggcagct gctgcagccg caggaattat gattcctgtg
     9421 aaaaacgttc aggcagatga caccggtatt cgttgggata aagccccttg tcgttactgt
     9481 ggtacaggtt gtagcgtgct agtcggtact aaagacggta aagtagtggc aacccaaggt
     9541 gacccggatg cagaagtaaa ccgtggttta aactgtatta aaggttattt cttatccaaa
     9601 atgatgtacg gtgcagaccg tatgcaagag ccaatgttgc gtatgaaaga cggtaagttc
     9661 gacaagaacg gcgatttcac gccggtttct tgggatcaag cctttagcat tatggcggag
     9721 aagattaaaa ccactattaa aaatgacggc ccgaatgctg taggtatgtt ctcatcaggt
     9781 caaacaacca tttttgaagg ttatgcgaaa gtgaaacttt ggaaaggtgg tttccgttca
     9841 aatacgattg acccgaatgc ccgccactgt atggcgtccg ctgcggttgc ctttatgcgt
     9901 acctttggta tggacgagcc gatgggctgc tataacgaca tcgaaaaaac cgatgcgttc
     9961 gtgctttggg gttcaaatat ggcagaaatg cacccgattt tatggtctcg tatttctgat
    10021 cgccgtttat cagacaataa agtgaaagtg gtggtaatgt ccacttacga acaccgttcg
    10081 tttgaattag ccgatacacc gattatcttc aaaccacact cagatttagc aattttaaac
    10141 tacattgcga actacattat ccaaaacgat aaagtaaatt gggattttgt taacaaacac
    10201 accaaattta aacggggtga aaccaatatc ggttacggtt tacgtcctga acacaaatta
    10261 caacaaaata ccaatgcgaa aactgccggt aaaatgtatg acagcgattt tgaagagttt
    10321 aagaaaatcg ttgcccctta tacattagaa gaagctcacc gtatttcagg cgtgccgaaa
    10381 gatcagcttg aaacattagc gaaattatat gcagatccta accaaaaatt agtgtcgttc
    10441 tggacgatgg gctttaacca acatacccgt ggtgtgtggg taaaccatat gatgtacaac
    10501 gtccatttat taaccggtaa gatcgcatta gaaggttgtg ggccgttctc actcacgggt
    10561 cagccgtccg cttgtggtac tgcccgtgaa gtgggtacat ttattcaccg cttaccggca
    10621 gatatggtgg tcacaaatcc gaaacaccgt gagattgtag agaattcttg gaaattaccg
    10681 gctggagcaa ttcctgatgt accgggcttt cacgctacag ctcaaagccg tgccttaaaa
    10741 gacggcaaaa tgaaattctt atggcagatg tgtaccaaca atatgcaggg cggcccgaat
    10801 atcaatgaag agatcttccc gggctggcgt aatcctgaaa cctttattgt ggtttcagat
    10861 ccgtacccat ctgtttcagc agtggctgct gacttaattc ttccaacctg tatgtgggtg
    10921 gaaaaagaag gggcttacgg taacgcagaa cgccgtaccc aattctggcg tcagcaagtt
    10981 aaagggccgg caaatgcccg ttcagatact tggcagttag tagagttctc taaatacttc
    11041 aaagtagaag aagtatggcc ggaagagtta ttagctaaag caccggaatt gcgtggtaaa
    11101 actctatacg aaatccttta ccgcaacggc aaagtagata gctaccaagt gccaactaac
    11161 attccgggct atatgaatga cgaagcagat cacttcggtt actacattca aaaaggctta
    11221 tttgaagagt atgcggaatt tggccgtggt cacggtcacg atttagccga ctttgacacc
    11281 taccacaaag tacgtggctt acgttggccg gtggtaaaag acgagaaaac cggcgaatac
    11341 aaagaaactt tatggcgtta ccgtgaaggc tatgacccat acgttaaagc cggtgaagaa
    11401 gtggcattct atggcaatgc ggacaaaaaa gcagtgattt taggtgtgcc atacgaacca
    11461 cctgcggaag caccggacga agaatatgac ttatggttct gtaccggtcg tgtactagaa
    11521 cattggcaca ccggtacgat gacccgccgt gtgccggagt tacataaagc attcccaacc
    11581 aacttggttt ggatgcaccc gaatgatgcg aaaaaacgag gcttacgtca cggtgataaa
    11641 gtgaaagtga tttcacgccg tggtgaatat gtatcgaact tagatacccg tggacgtaat
    11701 aaatgtccgg aaggtttgat ttactcgact ttcttcgatg ccggtcagtt aatcaacaaa
    11761 gtgacacttg atgcgactga tccaatttca tttgaaaccg acttcaaaaa atgtgcggtt
    11821 aaagtggtga aagcttaatt gtaggggcaa attatttgcc tcagacaagc ggtcaaattt
    11881 gcaaattttt ttacaaaaac gaccgcttac ctaagaggaa cccacaatga aaatggatcc
    11941 aaatcgtcgc cagtttttaa aaaatgcaac ccgtaccgca gccggtgttt gcggtgtagg
    12001 aatgatttta gggctacagc aacaacaaag ttttgcccgt caaggggtag cactacgccc
    12061 accgggtgca ttgccggagc aagatttcct gagtgcttgc acccgttgcg gacaatgtgt
    12121 gcaggcttgt ccttacgata tgttgcattt ggcatcgctt atttcaccag tggaagccgg
    12181 cacgccatac tttattgcac gggataaacc ttgcgaaatg tgcttggata ttccctgtat
    12241 gaatgcttgc ccaaccgggg cattaagcga agagctaaaa gacattgacg atgcacgaat
    12301 ggggcttgcg gtgttgctcg accacgaaac ttgtcttaac tggcaaggct tgcgttgtga
    12361 cgtgtgttac cgtgtttgtc cgttaatcga caaagcgatt actcttgaga aagtgcataa
    12421 cgaccgtacc tcgattcacg ccaaactgat tccgaccgtg cattctgatg cttgcaccgg
    12481 ttgcggtaaa tgtgaacagg cttgcgtatt ggaagaggca gcgatcaaag tgttaccgat
    12541 ggatttagcc aaaggcttgc tcggtcgtca ctatcgttta ggctggcaag agaaacaaaa
    12601 tgccggtaaa tcgctgattg aagatgttca cccagagggt ttacgcccag cttatgatgc
    12661 cagaatgccg gaaggcttac acgagccggt gtatcagcat atggaagtaa aacctgatgt
    12721 gaaagtggct acgccaagtc gggcgacaca aaactatgtg ccgaactcta cgacggtgga
    12781 agctccggag catttccctg atttagactt gaatctcaag ggggtgaaat aatggcagcc
    12841 aattctccaa aaaatgcggg cttagaggct cgtcagaaac taggttggtg gcacgcttac
    12901 cgctttttga ttttaagacg cttaagccaa ctcagcatta ttttgatgtt tttaagcggc
    12961 ccactttgga atgtctggat tttaaaagga aactacagcg gtagcttatt actagatacc
    13021 gtgccgatga cagacccatt aatgaccgct gaagtgctgg caaccggcta tcgccctgaa
    13081 tggacggtat tggttggggc gttaattatg gtggcgtttt acggcattgt cggcagcaag
    13141 ctgttttgta gttgggtctg cccgatgaat atggtaacag atactgctgc ttggttaaga
    13201 cgcaaactcg gtattcgcca aactgctaaa attccacgca atttacgcta tgtgattttg
    13261 gcggtgattt tagtcggtag tgcgatttcc ggaacactat tgtgggagtg gatcaacccg
    13321 gttgcggctc tcggtcgggt gtttgtattc ggtttagggg caacgctttg gctggtttta
    13381 gtggtgttct tgtttgactt attggtggca gaacatggct ggtgtggtca tctttgcccg
    13441 attggtgcaa cgtatgcctt aattggggcg aaaagcctga ttaaagtcaa agtggtagat
    13501 cgtaaccgtt gcgataattg tatggattgt tacaacgttt gtccggaacc tcaagtgttg
    13561 cgtgtgccgc tacacggtaa accggaggaa agcacggtta tcttatctaa agattgcatt
    13621 acctgcggac gttgtattga cgtttgtgcc gaaaatgtat ttgccttcgg aatgcgtttt
    13681 caaggcagta ttgatgtgaa aaatatttaa tttttatctt tttgaaaaca agaattttaa
    13741 tggagtgaac ctcaaatgag aaaatatctc gccttcattt tagccgtgat gtccggcttt
    13801 gcaatggcgg aagcccctaa gttatccgga tcaattgatg agacaaccga aagtgttgca
    13861 ccgggatttc ataacccaca aaaagatgtg ggcacgattc caaccacttt ccctttccaa
    13921 ccaccgcttg ttccacatag tattcgtggc ttacaagtga gcaaaaacgt aaaccattgt
    13981 ttaggttgcc acgctattga accatctaaa accacaggtg cgacccgttt accgccaagc
    14041 cattttaccg accgtgatgg caaggtgtac gaaaacgaat ctcctcgtcg ttatttctgt
    14101 ttgcaatgcc acgtgcaaca aactgatgta aacccgatta ttcaaaataa atttgaatct
    14161 gtacgtgaat ctcaagctaa ataaggagta agtaatgttg agaagatttt gtaactggtt
    14221 acgtagccca agcaaaatgg caattggtgc tgtaatcctt atttctgcat taggtggtat
    14281 tttcgcttgg agtggtttta atgcagggtt agcaatgaca aatactgaag agttttgttc
    14341 agattgccat atgaacgatg ttgtgccgga ataccgtgcc tctgctcact attcaaaccg
    14401 cagcggtgtg aaagcgattt gttcagattg ccacgtaccg cacgaattct ttccaaaatg
    14461 gcaacgtaaa atcatagccg caaaagaagt ttatgcacac tttaccggta aagtagatac
    14521 caaagagaaa tttgaagctc atcgtggcga aatggcagaa cgtgaatggg cacgtatgaa
    14581 agcgaacagc tctcaagagt gccgtaactg tcataatttt gatgatatgg acttcactca
    14641 acaaaaaaac attgcgcagc aaatgcacgc attggcacaa gagcaaggta aaacctgtat
    14701 tgactgccac aaagggattg cacacaatct cccacatatg gaagcgatcc agaaaaactt
    14761 tatccctgat gatttgctga aaaaagcaga agagaagaaa taacttaacg tgtttcaata
    14821 gaaaaccctc aatttccatt gagggtttct ttttagtagc caagttagta accaatggca
    14881 ttgacatttg gtaaaaaatc gttggaattt aaccgcttga cgaccgtttc tatcgtgccg
    14941 ttttcgtgca attcaatttc acgccagcct tgtggttgta agtctaaggt aaactggtcg
    15001 caattcggct taaattgaat gcaagtagat ggggtggcat aaatcggaat accatgccaa
    15061 atatcatcaa cctgctgatg aatatgacca tgcacaatcg cttttacatt cttaaatttt
    15121 gcgaaaatct cggataattc attgctgttt tttaagctat gctgatccag ccacgctgag
    15181 tttgtcggca aaatattgtg gtgcagagca accaaggtaa accgttgcgg atattgtgcc
    15241 aatttttctt ctaaccattt aagctgtgag taagagagtt cgccataagg catacctacc
    15301 acctgggtat ttagcatcag aagctgccat tgctcaccga gtaaaatttg tttatgggga
    15361 aggatatgtt tatattgcgc caaaatttct gacatactcg gctgaacatc gtgattcccc
    15421 tctagccaca ctatcggcga gtttagcgaa ttagttatct gtgcaaaata gtgataacca
    15481 gcaatattgt tatcttgaat caaatcacct gtggcaagaa ctagatcaaa atattgcttc
    15541 gcttgtttgt ttatttgctc aataactgcc gaaaaacttt ttactgtttt gacattaagt
    15601 agagtttcct ccggattgga gaaaaggtga gggtcagtta tttgtaataa cttaattacc
    15661 cctgttacgg gtaacttaat atattcgtgc attcgttttg catccattca aattctagta
    15721 atttttaact ggtgagattc tatcagtaag ctaaaagtaa aaatgtggac tatgccgcat
    15781 ttttgaaaaa aagtgagatt aatcaaaaaa aatttattat tttcgatagc taagacaatg
    15841 gtaagtttga ttaatacttt catattgtaa tagatgattt ttatactgtt tggctgtttc
    15901 tagaacaact tctttatatt tttgattgat atcaaggcaa attgtttctg aagataaaat
    15961 aattaacact tattagttaa taaaaaagga gttgaaatgc gttcagaact attaaaaacg
    16021 cttttgctat cagggctgat tttaccgcta ttgatggcgt ttgccgtagg agcttacggc
    16081 tttattgtgt ggatgttaca actgtttgtt attggtttac cgggagcgta gaaaatgtta
    16141 ggttcaatca aagcattatt tactcggcct gcaaccaaaa tcgggttggg agtgttagtt
    16201 ggtatcggtt ttattgccgg agcaattagc tggcatcaat ttaataaagc gatggatcat
    16261 accagcactg aagagttttg cgtgagttgc cactcaatgc agcagccgtt agaggagctt
    16321 aaaaaaaccg cccactggtc gaataaaagc ggggtaacgg caacctgttc aagctgccac
    16381 ttaccgcacg attataccga aaaatatgcc cgcaaagtgc aggcaagccg tgaggcgtgg
    16441 gcagaattat ccggcaaata taaagaagaa ggctcatttg aaaaacaccg cttagaaatg
    16501 gcagagcgtg agtgggcaag atttgccgcc aatggttcaa aagagtgtaa ggcttgccac
    16561 agctatgagc gaatgaattt tgataaaatg ggcgaagcag ctcgtaaggc aatgaaaccg
    16621 gctgcggaga aagatcaaag ttgtatggat tgccacaaag gcattgctca ccacttaccg
    16681 aaagccgatg aaaatgcact gaaatcgaag tttgatcagt ttgtgaataa atccccaaac
    16741 caaggcaaat cttactacac caaagggaat gccgaattat ttctagacga aggtttaagc
    16801 caagctatcg ggcaattaga aaccgccgtg ccggtggcat ttgtgcaagc gggcaaaaat
    16861 gcggatttgg ttgagctgac aatgtggcgt aaagagaaag gtttcggtcg catttggtat
    16921 cacgatttcg ggaaaaacat taccgatgcg gttctaacca aagagtttat ggcaaatcag
    16981 ccgaaatttg aggtgttgga aaccaaagaa gatccgatta ccggcttgaa ttggcaaaaa
    17041 gtgaaactac aagcgtggat tggcaaagct caattattag acgatgttac cccaatctgg
    17101 gcgaatgcag aaaaccaata caaaacccaa tgtagcactt gccacagaca gcctgatgtc
    17161 gcccacttcg attccaacag ctggatcggc ttattcaacg gaatggtcgg ctttaccaat
    17221 atggataaac agaccggcaa agaggtgcta cgttatttac aaatgcacgc ctccgatagt
    17281 gaagaagcga agcattaata atattactcc cctctttact aaagagggga attaatcgag
    17341 cgttgaataa cattctctgt actagctcac gtttttacaa ataaagaagg acaagatatg
    17401 caacaatctc gccgtcaatt tttaaaaaat atgtctgtga tggctgccgc tgtcacaatg
    17461 ccgaatttcc tcgtgcctcg caatgtgttt gcgagtgaag acctcagtca atggaaagtt
    17521 tccggctctc actggggggc aatgcgtgcc aaaattgaga acggacgagt ggcagaaatc
    17581 aaaccgttcg agtttgataa acacccgacc gaaatgctca acggcattaa aggcttaatt
    17641 tacagcgatt cccgtatccg ctacccgatg gtgcgtttag attggctcaa aaaccgccat
    17701 aacagcaaca ccgcacagcg tggcgataac cgctttgtgc gggtaacgtg ggacgaagcc
    17761 ctcgacctgt tctaccaaga gttagaacgg gtacaaaaag agtacggccc gtgggcgtta
    17821 cacaccgcca atgtgggctg gcgttcaacc ggtcaattcc acagttgcgg taaccatatg
    17881 atccgagcga ttgcgatgca cggtaacagt gtcggcacgg caggcgacta ttctaccggt
    17941 gcagggcaga ccattctgcc gtatgtgctg ggttcaaccg aagtctattc gcagggcacg
    18001 tcttgggaaa tcatcttaaa agagagcgaa aacatcattt tctgggcaag cgacccggtg
    18061 aagaacctgc aagtgggttg gaactgcgaa acccacgaag cctatgccta cttggaaaaa
    18121 ctgaaagaga aagtggcagc aaaaggcgtg aatgtgatct gtgttgatcc ggtgaaaagc
    18181 aaaacccaga atttcttagg ttgcgaacag cagtacatca atccacaaac cgatgtgccg
    18241 tttatgttgg cacttgccca cacgctctac accgagaacc tgtacgacaa aaaattcttg
    18301 gatatgtaca cggtcggctt tgaaaaattc ctgccgtatc tgttaggcga aaccgaagac
    18361 aaagtggcga aaaccccgga atgggcggct gaaatttgtg gtatttccgc cgacaaaatc
    18421 cgtgaatttg cccgaatgct tgccggcaaa cgcacccaat ttattttcgg ctgggcaatt
    18481 caacgccaac aacacggcga acaaccgtac tggatgggag cggtgctagc ctcaatgtta
    18541 gggcaaatcg gcttggaagg cggcggcatc agctatgctc accattacag ctctatcggt
    18601 attcctgaat ccggtgcggc aatgccgggg gcgttcccgc tcaatattga tgaggggcaa
    18661 accccgaaat acgacaacaa agattacaaa ggctacagcg acaccattcc ggtggctcgt
    18721 atgaccgaca gcttgctcca cgccggcgaa accattgatt acaacggcaa aaaagtgact
    18781 tacgctccgt tcaaaatggc gattttcacc ggctgtaacc aatggcaccg ccattccgag
    18841 cggaacaaaa tgaaacaggc gttccaaaaa ctggaaacca ttgtttcgat caactacagt
    18901 tggacggcaa cctgccgctt ctccgacatc gtgctgccgg cctgtacccc atttgaacgc
    18961 aacgatattg acgcctacgg ctcatacagc aaccgtggcg tgattgcaat gcacaagctg
    19021 gttgatccac tctacgactc tcgctccgac tttgagattt tccgagatct ctgccgccgt
    19081 ttcggtaaag agaaagagta cagccgtgga atggacgaaa tgcagtgggt agaaaaactc
    19141 tacaaagatt gtcgccgtga aaacagaggt aaatttgaaa tgccggagtt tgctgaattt
    19201 tggcaaaaag gctatgtgct gttcccagag ggcaaacctt gggttcgcca cgccgatttc
    19261 cgtgaagatc cggaattgca cgcacttggc acaccgtccg gctttatcga aatttacagc
    19321 aacaaaatcg cctctttcgg ctatgacgat tgcaaaggtc acccaatgtg gtttgagaaa
    19381 gccgaacgtt cacacggcgg taaaaattcc gacaaattcc cgtactggtt gcaatcagtt
    19441 cacccggaca aacgcttaca ctctcaactt tgtgaatcga aagaactgcg tgaaacttac
    19501 agcgtgcaag ggcgtgaacc gctttacatt aacccacaag atgccgccaa acacggcatt
    19561 caagacggag atttagtgcg agtgtttaac gaccgtgggc aagcgattgt gggggcggtg
    19621 ctttccgaca acttcccgac cggcgtagtg cgtttacaag aaggggcttg gtattcaccc
    19681 cttgacgaaa gcgtgggggc gattgacacc tatggcgacc cgaacacaat gaccctcgac
    19741 atcggcacgt ccaagttggc acaagcggtt tccgccaaca cttgcttggt gaacatcgag
    19801 aaatttatcg gcaatgcccc ggctccgaat ggctttaacg gtgcgattga ggtaacggct
    19861 taatgacgtt ggcaatcagt cgtgaagaac ggcaatttat ctatggctgg tttaacgcaa
    19921 tgctcgcccg agaactttcg gacgagcagt taaatgcctt acaagcgggc gaatttgacg
    19981 atttttttgc atacctcagc gaattgggtt ttgccgaaca ggttgcaaaa tttcaagcag
    20041 aagtgaccgc ttgtaggcag ctggaatttc ctcgtctaga actggcggct gactttgccc
    20101 aactgttttt attggaaggc aatctcagtg ccattcctta cgcctccgcc tatttaagcg
    20161 gcgaagcgtt agcgaaaaat ttggcggaaa tggacagact gctgggcgaa tttgggctgc
    20221 aagttaatcg agaaaccaaa gagccgagcg atcacctttg cgtttatctc accctttttg
    20281 accgcttgct tgctgaaaaa ccgttggaaa cgcaacagca atttctgcaa aaccaactga
    20341 tgagctggct ccctgcgtgg ttcgccaaag ccaaaaccgt caaaactaac accggcgttt
    20401 atccggcgtt gctaaggttg tttgaacagg tgttgctgaa ggaacaaaga taaagttatt
    20461 tatttgagaa tgatttgtat tgagcgaatt gagaaaggaa gttaaaattt caacttcctt
    20521 ttttattggc tggatttatc cacattatta caagcggtta tttttataaa aaaatttaca
    20581 aaggagacat taatgcaaaa taataaaacc acctacctaa attggtacga tttatgcgtg
    20641 ctaaccctga tcctgtttgg tgaggcaatt tatacctcaa cccagcaata tttcatcacc
    20701 accgaaatgc aaggtaattt tgaagaaaat ttaacctttt caaatgaaca aaattattgg
    20761 gcattactga cgcaacttgc attgttgctg attgcaatgg gctatctaaa atggcggaat
    20821 tttgatttca gccgttgggt gattcgtccc tcttggctgg ctttttttag cggtatcggg
    20881 ttgtttatct tgctctcgtt agcgatggat ctctattttg aaacattata tggtgtttac
    20941 aacctagtgt atccggagcc attttgggca gtattgagag aagtgaatat ttctaccgtg
    21001 ctgtatgcga ttttaaacgg cttttatgaa gaaatctttt tcctcggtat ttgcttggcg
    21061 gttaaacctg aatatttaaa atgggcggtg atttattcac tgattattcg ggtgagtttt
    21121 catacctatc aaggaatgga aagtgcgtta ggattaggaa tttggctcgg tttaattatt
    21181 tatttgctct actcacgctc aaagcagaaa aacctatttc cattttgggt ggcacacagt
    21241 attgcggata ttttggggct gagtttgttg gcttattttt agttaaaggt gctacattta
    21301 agcggcataa gttgatagat ctgatcgtac cagtagcata aaaacattat tatttgtatg
    21361 gaaaggtgct tttaggttac aatataaccg atagttattg gttataacta aaaattattt
    21421 ttaatttaac ggagcaaata tgaagagtat caaaaaatta accctagcca ctttgatttt
    21481 agtgggttta actgcttgtg gtagcggtgg ttcaggtagc agttctaata atgctaaatc
    21541 gaaaccacaa gttgagttaa aaaaaactga agaggataaa aaaactgaag aggataaaaa
    21601 aactgaagag gataaaaaaa ctgaagagga taaaaaaact gaagaggata aaaaaactga
    21661 agaggataaa aaaactgaag aggataaaaa aactgaagag gataaaaagg ctgaagaagc
    21721 aaaaaaaatt gcagaggcaa aaggaattgg caataaagaa tataaagatg gattaaatga
    21781 gttagaagaa aaaaatgaaa caggtaaaaa cggagaagag attcgaaccc atggttatct
    21841 ctataacagc cattattccg ttgtaactgc caaaatgaaa caaactttac aggaaaatgg
    21901 tcgtcaaatg gaacctacgg ttgaagtgaa agggcttaaa actgagaatt taccgacaga
    21961 gggcaaagca acatataaag gagaagcctt tgattctcac ggtaataaca gcaattcagt
    22021 agtaggtgga gaattaatct ataatgttga tttctctagt cgtaccggat caggtctagt
    22081 taaaaatgta cagggcggtt ctatcgagtt agcacaaggc gaaataaaaa atgatagtat
    22141 tatagcttct gctcaccaaa agtataatga tcaggctgtt ggaaatggta gttacaatat
    22201 ccaattcttt ggtccaaatg cagaagaaat tggagggaaa attgagctta atggtgaggg
    22261 cgaaggctca atgaagcaga tgttaggtat tgcaggaacc cgagaagaac aaaaataaca
    22321 tttaataccc aatgccgttt aatcttaaac ggcattcttt tttactatgt ataaaaaaca
    22381 ttttctattt ttacttgttt cgcctttagt aatggcggaa acggttgagt ttcagcaaga
    22441 tcccaaagag tttgatgggc agcgacaagc ggttaaattt gagcaagaaa ttgcaaaaaa
    22501 ggatttaaaa ttaaccgctt acttggagga agataattct cttaaaggta ttgaacagca
    22561 cattaaccaa gcgattctta gacaagattg ggcgaagctg gaaaggctgc ttggcgatta
    22621 tgcaaagcaa gagcaatttg atccgctact tttagactat gctttggcgg cattggctta
    22681 tgctaaaaaa gattatcgct ctgcggcgtt ttattatcag cagttgctga aaaaacagcc
    22741 tgatttaacc taccctcgtt ttgatttggc tctgatttta aaagaggatt atcgctacag
    22801 ggaagcagag caagaattta agcaactcaa aaccgatgat ttacgcaatg cggtgaacag
    22861 tgcgttggct caaatagagg aggaagagag ctggaagccg gatttttatt tgcaatatac
    22921 tcaaaccaac aatgtgaata atgcttcttc gtcgccaacg gtaaatgtaa acgggcggat
    22981 ttttattaaa gaatcagaca gcttgccgca gtcggcaaaa ggcgtaagat atggcgttgg
    23041 cttgagtaaa atgcgaaata tcggcggtaa tcattttgtg ggagtcgatc ttggctataa
    23101 cggcgtttat tactggaata accacgatta tagcgaacag tcggtctcac taacaccaaa
    23161 atatagctac agaacggcaa cttatcgtat cggggtttcg ccctttattg agcagaattg
    23221 gctgggtagc tcacggtata actatcaatt tggtagcagt atcaatgctg ttaaactttt
    23281 tgaacgaggg ctgatttccg gctcattcag ccatctgcaa aaacgttata gtgaacagca
    23341 tattgccgac cgttacaatg gttatcgcaa ccaactcacg ctaggtacgc aatggcaagc
    23401 ggtcaaaaat tggcgatttt ttgcaaatct taacgctagc cgtgaaatta cccgtgagaa
    23461 agctcaatct tccaataagt ggctggcgac cattggcgta atttaccaaa ccccaagctg
    23521 ggcaagttcg gtaagtgtcg gatatggcaa gcgttatttt gctgataaac attatctgtt
    23581 tggctataaa cgccaagata aggaatatca agcgaatgtg gcggtgtgga atcgaagttg
    23641 gcactggcaa gggattgtgc cgaaattgaa tttccgttat caaaaaatcg atagcaatat
    23701 tgccgatttc tactctcgta gcaataaaga agtctttatg accttagaga aactatttta
    23761 aggctgtgta tgaatgtcgg ggagaaaaat tttctccccg atatttatgt gtagaagatc
    23821 agacttgatc tgacaattca ctctaaaaag tgagagtttc ccgtttagaa tatgagtgtc
    23881 aaaaatcaat ctaaacaaaa aggaaactct catgttttat tctaacaa
//
LOCUS       DANLXD010000031        22871 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.031, whole genome shotgun sequence.
ACCESSION   DANLXD010000031 DANLXD010000000
VERSION     DANLXD010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22871
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.031"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            174..1472
                     /gene="tig"
                     /locus_tag="PXD18_000992"
     CDS             174..1472
                     /gene="tig"
                     /locus_tag="PXD18_000992"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HDL6301438.1"
                     /translation="MSFSIETLEGLKRRVTINVPADKIEAAYKEQLKGYAKNARVDGF
                     RKGKVPHSIIEQRFGIAARQDVLSDEMQRAFFEAVIAEKINLAGRPTFTPNNYQPGQD
                     FSFTAEFEVFPEVELKGLENIEVEKPVVEIADADLDKMVDVLRKQQATWSESQEAAKA
                     ESRVTIDFVGSVDGEEFEGGKASDFVLFMGQGRMIPGFEDGIVGRKAGEQFDIDVTFP
                     EEYHAENLKGKAAKFAITLKKVEEMVLPELTEEFVKKFGNAKSVEELRAEIKKNMQRE
                     LKNAVTSRVKTQVINGLIAQNDVEVPAAAVEEEINVLRQQAVQRFGGKPEMAAQLPAE
                     LFEAEAKRRVQVGLLLSSIIGSNELKVDEKRVEEMIADIASAYEQPAEVVAHYAKNRQ
                     LTENIRNVVLEEQAVDAVLAKAKVTEKTMSFDEVMSQQAQ"
     gene            1588..2040
                     /locus_tag="PXD18_000993"
     CDS             1588..2040
                     /locus_tag="PXD18_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDL6301439.1"
                     /translation="MEQLTFAQQLEQFFANHTLMVFAWVALLIAVIFSFYKSATQKYK
                     IVDNAQATQLINKEEAVVVDLRSDEEFRAGHIIDSIHVLPSDIKAAKINQIDKYKARP
                     VIVVDTNDFTSGGVAADLAKQGFSRVYVLKEGIGGWRAASLPTIKKHK"
     gene            2061..2561
                     /gene="secB"
                     /locus_tag="PXD18_000994"
     CDS             2061..2561
                     /gene="secB"
                     /locus_tag="PXD18_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HDL6301440.1"
                     /translation="MSEENQVASTEEATQTPFELQIQRIYVKDVSFEAPNLPTIFQQE
                     WKPQLGFELDTETKEIGEDLYEVTLHITVQTTLEDSNDVAFICEVKQAGVFTIKGLEG
                     IQLAHCLASQCPNVLYPYARELISSLVNRGTFPALNLSPVNFDALFMDYLQRQEESAE
                     EPALAN"
     gene            2668..3678
                     /gene="gpsA"
                     /locus_tag="PXD18_000995"
     CDS             2668..3678
                     /gene="gpsA"
                     /locus_tag="PXD18_000995"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HDL6301441.1"
                     /translation="MSEIYSAPITVLGAGSYGTALAIALSRNGHKTYLWGHNPDKMAV
                     LASERMNQDFLPDIVFPEALEIVADLATAVQKSKDLLIVVPSHVFSEVLAQIKPFLSQ
                     DHRIMWATKGLERDTGRLLQTVAKEILGEIYPLAVLSGPTFAKELAAGLPTAISLAST
                     DPVFADQMQKRSHCSKAFRVYLNNDIIGVQLGGAIKNVIAIGAGISDGMGFGANARTA
                     LITRGLAEISRLGVSLGADPKTFTGMAGLGDLVLTCTDNQSRNRRFGLALGQGKSAEV
                     AIAEIGQVVEGFYNTKEAYLLAQTQGVEMPIVEQIYQMLFCGKQASDVVKTLLGRERK
                     GE"
     gene            3694..4509
                     /gene="cysE"
                     /locus_tag="PXD18_000996"
     CDS             3694..4509
                     /gene="cysE"
                     /locus_tag="PXD18_000996"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HDL6301442.1"
                     /translation="MQQSEINQIWQAIRDEAKELANCEPMLASFFHATILKHHNLGDA
                     LSYILANKLENPIMPAIALKEIIEEAYRAEPQIIASAACDINAVRTRDPAVDKWSTPL
                     LYLKGFHALQSYRVTHYLWNQGRKALAVYLQNEISVAFDVDIHPAAKVGCGIMFDHAT
                     GIVVGETSVIENDVSILQGVTLGGTGKENGDRHPKIREGVMIGAGAKILGNIEIGRYS
                     KIGANSVVLQPVPDHATAAGVPARIIGKSSEQKPAFDMNQYFEDEQGLFGDGI"
     gene            4558..5169
                     /locus_tag="PXD18_000997"
     CDS             4558..5169
                     /locus_tag="PXD18_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL6301443.1"
                     /translation="MQLTFNDFQNYYNGKGDLTMFSFYGKKTWENGIYVGIDGSIGRA
                     NNKLSHQSQTIKLARNVYSLGLTVGKTLEVASFNLQPSFGMRYHHLTSANAQLENTKF
                     ETDRVDLLAIQAGLALNKTFIFNELKVKPELGSYFVDASHGTLKTKLNEFSLNQNIGR
                     YFKQEVGITLHYKGVSSSVHAGFTKGNTLQEQKFISLKVGYEW"
     gene            complement(5709..6401)
                     /locus_tag="PXD18_000998"
     CDS             complement(5709..6401)
                     /locus_tag="PXD18_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDL6301444.1"
                     /translation="MTELTPKQEAFCFAYIETGNASEAYRQAYETEDMKSETVHRKAK
                     ELMDNGKITARIEELKAEHAERHKLTVDDLLKELEEARILAREKENPNAMTQATMGKA
                     KLLGLDKQVTDPCFDGETGKGDMILSVNCSSIKDGKALDETCILKAGTHEFITRDSFI
                     FYRHIRIDSLDEIKANIEAGYFIQKALINDEAYQQILKGVLSSKSVTPRYKRFLKNAI
                     RQSACPDILAEP"
     gene            complement(6398..6823)
                     /locus_tag="PXD18_000999"
     CDS             complement(6398..6823)
                     /locus_tag="PXD18_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301445.1"
                     /translation="MKHELNLAGITALMNEPIKATLSFLDFPHIRIERLHHDNGRPFF
                     IGVLSLDLEDHINIEMAGATGFLEALAIIAYHQQLTATPLLVNDDLLSEINKLPHPQR
                     TNPFIDRHGNEITREQMSKEYREKIDYAFAEKRMAEGKE"
     gene            complement(6830..6982)
                     /locus_tag="PXD18_001000"
     CDS             complement(6830..6982)
                     /locus_tag="PXD18_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301446.1"
                     /translation="MPELLIVLGNRIAKLEQQHNAMPSETDSITLGILRKQLSQLLKV
                     AERIKE"
     gene            complement(7143..7829)
                     /locus_tag="PXD18_001001"
     CDS             complement(7143..7829)
                     /locus_tag="PXD18_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301447.1"
                     /translation="MADHSQFISRLENRIEPKISFQELIQELSNYTNKPFSHIADKLK
                     SLIFSFQQNGIYTNAFVNCTLFEDGESYAIEPKTLHFKDAFDQPKGVLSDVIAQNSID
                     VEHLNAYYVTAREITQLIKTQSPTLLDKLTTKQTQSEISQIQNDYISVYDFIEWASKH
                     YSSLSETANDLNRLLKDKNIQLYRQYGGISPSIDKDNTNLKAAFDFVAINNGYEKQSS
                     SFNFDDDIPF"
     gene            complement(8224..8547)
                     /locus_tag="PXD18_001002"
     CDS             complement(8224..8547)
                     /locus_tag="PXD18_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDL6301448.1"
                     /translation="METIQINEQAAEKHGLRPFDVAEFLTDEATIQAYLAEVLKEGDQ
                     DEFLEALNDVARARGMAELAKQTGLGRESLYKTLAKGSKPRFDTIQKILGAFNLVLIP
                     QVKNG"
     gene            complement(8660..8878)
                     /locus_tag="PXD18_001003"
     CDS             complement(8660..8878)
                     /locus_tag="PXD18_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module killer protein"
                     /protein_id="HDL6301449.1"
                     /translation="MMREQTTNQIIITDNFSKWLENLKNPIAKATVARRIKNAINGNF
                     GDHKSLAGTGGLYEMRIATGAGYRIYYA"
     gene            complement(9153..10379)
                     /locus_tag="PXD18_001004"
     CDS             complement(9153..10379)
                     /locus_tag="PXD18_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6301450.1"
                     /translation="MARKITPLNDTQIRKAKPEDSPLRDGNGLLLVITSNSKLWRFRY
                     ERPFTKKRNDLSIGAYPDISLAQAREIREEYRALLAQNIDPQTHRQQQEQAKANEISN
                     TYENVAWAWLEHRKTKKNFSDNYQKDVIALIKNNLLPHFGRMPITQITAPMAIKAFKQ
                     YQDEGKLEKLKRAIQKHNEIMMFAVHREMIPFNPTANIAKEFDSPTVEHFKTIKPEDL
                     GEFLYTLQNAQIHLQTRYLILWQLLTMTRPNEAAKAKWADIDEKAKLWTIPAENMKRG
                     IEHKITLSRQAIALLREIKKLSGGKTYLFPSVKNPQTHVNTQTANGAIKRMGYKGKLV
                     AHGLRAIASTYLNEKGYNSDLIEVALSHLNSDRIKAAYDRGERLEQRFKLLQVWADFV
                     EECSQGSLPQYHLKIA"
     gene            complement(10654..11020)
                     /gene="ssrA"
                     /locus_tag="PXD18_001005"
     tmRNA           complement(10654..11020)
                     /gene="ssrA"
                     /locus_tag="PXD18_001005"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            11186..12145
                     /gene="rpoH"
                     /locus_tag="PXD18_001006"
     CDS             11186..12145
                     /gene="rpoH"
                     /locus_tag="PXD18_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HDL6301451.1"
                     /translation="MKKFNENEIEDAEIIDAEPIDVDEIDEEETSVEAMHPALVSGSM
                     PVPQGNLDSYIRMANQYPILTAEQEKELAERYYYDEDVEAAKQLILSHMRFVIHIARG
                     YLGYGLPLADLIQEGNIGLMKAVKRFDPNVGVRLVSFAVHWVKAEIHEYVLKNWRIVK
                     VATTKAQRKLFFNLRKNKNRLAWFNEEEIKKVADDLGVSVEEVREMESRMTGQDLGFD
                     LPAGDDDEDSYAPSMYIEDSSSNFADDLEDEQHNGQATAQLAYALATLDERSQDIIKT
                     RWLDDNKATLQDLADKYNISAERVRQLENAALKKIKEAISLDG"
     gene            12311..12604
                     /locus_tag="PXD18_001007"
     CDS             12311..12604
                     /locus_tag="PXD18_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3144 domain-containing protein"
                     /protein_id="HDL6301452.1"
                     /translation="MTQLSTSVYQRADGFINVANAHLKNIAPNQVSNAMLFGCARFNA
                     YVAASKAEYKQQLADSREEVIQYFVEQYKEMLTANLDEYIQNFERYIEGKKAD"
     gene            complement(12622..12867)
                     /locus_tag="PXD18_001008"
     CDS             complement(12622..12867)
                     /locus_tag="PXD18_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HDL6301453.1"
                     /translation="MAIQAIPASQDFIWDGKDDDERPVTPSEFSIAMKKRGRPAGSKK
                     ELVSLRLDKSVLEAFRASGKGWQSRINQVLSDFVKQV"
     gene            complement(12923..13186)
                     /locus_tag="PXD18_001009"
     CDS             complement(12923..13186)
                     /locus_tag="PXD18_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HDL6301454.1"
                     /translation="MKIYTWDETKRKINLAKHGLDFADADEVLSSPYRFDVEVIRNNE
                     FRIQSFAYSFGRLLVLSLAYTEREDYIRVISFRRASKAEREAY"
     gene            complement(13324..13863)
                     /locus_tag="PXD18_001010"
     CDS             complement(13324..13863)
                     /locus_tag="PXD18_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HDL6301455.1"
                     /translation="MLDLTKIKLVITDVDGVLTDGGMYYTDQGEVMKRFHVHDGLGVK
                     MLQSCGIKVAVLSGGDTALLRKRLEVLKIDLALLGKMEKRSACFELMQQAGVTPEQTA
                     YIGDDTLDLPAFEVCGIAIATRNALDYIKEKADWVLQKAGGEGAFREVSDQILEAQGF
                     GEIFKTADGFLTVAGKMAQ"
     gene            13934..14611
                     /locus_tag="PXD18_001011"
     CDS             13934..14611
                     /locus_tag="PXD18_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HDL6301456.1"
                     /translation="MSIAENLSQIHQQIQQISEQYQRDNVRLLAVSKTKPVEAIQAAI
                     EAGQRAFGENYVQEAVEKIEFFANRPELEWHFIGPLQSNKTKLVAAYFDWIQTVDRLK
                     IAERLNEQRPADKAPLNVLIQINISDEASKSGIEPDEMLPLAQAISQLPNLKLRGLMA
                     IPKPESEPEQQKVAFRKMQLLFNRLQTEFDDIDTLSMGMSDDMQAAIECGSTMVRIGT
                     AIFGARR"
     gene            14796..16643
                     /gene="typA"
                     /locus_tag="PXD18_001012"
     CDS             14796..16643
                     /gene="typA"
                     /locus_tag="PXD18_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HDL6301457.1"
                     /translation="MQNVDISKLRNIAIIAHVDHGKTTLVDKLLQQSGTFGETRGDVD
                     ERVMDSNDLEKERGITILAKNTAINWNGYHINIVDTPGHADFGGEVERVLSMVDSVLL
                     VVDAFDGPMPQTRFVTQKAFAHGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLGASD
                     EQLDFPIIYASALNGVAGLEHEDLAADMTPLYEAIVKHVQPPQVELDAPFQMQISQLD
                     YNNYVGVIGIGRIKRGSVKPNQAVTIVDSEGKTRQGRIGQVLGHLGLQRFEATEAFAG
                     DIVAITGLGELNISDTICDINAVEALPALSVDEPTVTMFFCVNTSPFCGQEGKFVTSR
                     QILERLNKELVHNVALRVEETSNPDEFRVSGRGELHLSVLIENMRREGYELAVSRPKV
                     IYREEDGKKQEPFEQVTIDIEEQHQGSVMEALGIRKGEVRDMIPDGKGRTRLEYVIPS
                     RGLIGFRNEFMTMTSGTGLLYSTFSHYDDVKPGEIGQRKNGVLISNATGKALAYALFG
                     LQERGKLMIDHGVDVYEGQIIGIHSRSNDLTVNCLQGKKLTNMRASGKDDAIVLTTPV
                     RFTLEQALEFIDDDELVEVTPQSVRIRKRLLTENDRKRASRTTTSTSTH"
     gene            complement(16692..17129)
                     /gene="rimI"
                     /locus_tag="PXD18_001013"
     CDS             complement(16692..17129)
                     /gene="rimI"
                     /locus_tag="PXD18_001013"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HDL6301458.1"
                     /translation="MIEQIQAEDFEQLFEIEQQAHLVPWSKGTLLNNQGEKYLNLKVV
                     EQNKIVAFAISHIVLDEATLFNIAVAPDFQGKGIGKRLLSELILQLQQRKLTTLWLEV
                     RESNHSARKLYDSLGFNEVTTRKNYYPTPNGSKENAVVMALYL"
     gene            complement(17122..17544)
                     /locus_tag="PXD18_001014"
     CDS             complement(17122..17544)
                     /locus_tag="PXD18_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit psi"
                     /protein_id="HDL6301459.1"
                     /translation="MNRRDLLLQEMGISQWVLTNPQVLKGDAQIRLNNAVKLVVVCEE
                     DHQHSRLFADILRALKLKNSEYQWLTGEQSQRLVFEHSPIFWLIQAEEQAVKMAKSFT
                     NQTAWKNESWQDLAKSTTKRQLWQQIDTFSAQFGEQRD"
     gene            17674..18663
                     /gene="rsmC"
                     /locus_tag="PXD18_001015"
     CDS             17674..18663
                     /gene="rsmC"
                     /locus_tag="PXD18_001015"
                     /EC_number="2.1.1.172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1207)-N(2))-methyltransferase
                     RsmC"
                     /protein_id="HDL6301460.1"
                     /translation="MLSLESEVLERHLALFENKSVLLFGDVRDDFARQLQSRAEKVAV
                     FSSYFDYARHHSEVEFGLECGLSAELAVFYWTKNKQECQFQLLQWLSQCQAGQEMLII
                     GENRAGVRSVEKLLEPFGNIAKIDSARRCGLYHFELQTVPTFDCKKFWKSYRLQDLDV
                     FDLPAVFSSAELDNGTKLLLSTFDKADRLKGKVLDLGCGAGVIGATLKQQFPKIKLTM
                     SDIHAMALESGRRTLAENQLEGEVVASDVFSHINERFDLIVSNPPFHDGVDTAYRAVE
                     ELIFQAKNHLTKGGELRIVANAFLPYPDLLDKAFGKHDVLAKSTKFKVYSART"
     misc_feature    18793..18915
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            18937..19314
                     /locus_tag="PXD18_001016"
     CDS             18937..19314
                     /locus_tag="PXD18_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor"
                     /protein_id="HDL6301461.1"
                     /translation="MKNPIEIYQSQDGKTQVSVQFDKETVWLSLQQMADIFGRDKSVI
                     SRHLRNIYQEGELEREATVAKNATVQIEGAREVVRLKDYLVKGYALNERRLQERGIEF
                     EQVIGLLSQYTGCLSLVGGRKFA"
     gene            19381..19821
                     /locus_tag="PXD18_001017"
     CDS             19381..19821
                     /locus_tag="PXD18_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL6301462.1"
                     /translation="MSINISPLASKNLTEWKLLWQQYLDFYQVNLADDIIQSTWQKVS
                     ESENVKGFGAFVDNRMVGFVHIVIHPNTWNLTECCYLEDLFVLAEYRNQGIGKELIEY
                     IYRYAQEKGYNRVYWVTDKNNHQAQQLYNKLANDSGIIQYRKNF"
     gene            19851..20918
                     /gene="hisC"
                     /locus_tag="PXD18_001018"
     CDS             19851..20918
                     /gene="hisC"
                     /locus_tag="PXD18_001018"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDL6301463.1"
                     /translation="MTISQLSRKNIQALTPYQSARRLGGSGDVWLNANEYALSPNFDL
                     TDRTFNRYPEPQPQAVIEGYARYAGVAPENVLVSRGGDESIELIIRAFCEANDSILYC
                     PPTYGMYAVSADTCGIATKTVPLTADFQLDLAQIKANLEGVKVVFVCSPNNPTGNLIK
                     RSDLFELLQITAGKAIVVVDEAYIEFCPEARLVSELANFPHLAIIRTLSKAFALAGLR
                     CGFTLANAELIGVLQKVIAPYPLPVPVSDIAAQALSPQGIEQMKTRVAEVITLRAELQ
                     KNLENLPLVEQVFDSEANYLLFKCQDGQKVFKALWEQGIILRDQHKALGLQNCIRITV
                     GAREENLRVVEAITALSQFQR"
     gene            21103..22191
                     /gene="hisB"
                     /locus_tag="PXD18_001019"
     CDS             21103..22191
                     /gene="hisB"
                     /locus_tag="PXD18_001019"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018355873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HDL6301464.1"
                     /translation="MQPTLFIDRDGTLIDEPKTDFQIDSLEKLKFEKNVIPALLKLKG
                     KYRFVMVTNQDGLGTSSFPQADFDKPHNAMMALFNSQGIEFDDVLICPHKPEDGCDCR
                     KPHTKLLQKYIDRQLFDPANSFVIGDRATDVQLAENLGIRALQYHPEKLNWDLIAEKL
                     LGEAVTNIGERPKRFAEVIRKTKETDIKVQVWLDETGNNEISTGVGFFDHMLDQIATH
                     GGFRMNITTKGDLWIDEHHTVEDTALALGTALKQAIGDKRGIARFGFVLPMDESRAEC
                     AMDLSGRPFIKFKADFKRDKVGDFSTELTEHFFQSIAFTMLATLHIKAKGDNDHHKIE
                     SLFKVFGRTLRQCIRIEGNELPSSKGVL"
     gene            22286..22570
                     /locus_tag="PXD18_001020"
     CDS             22286..22570
                     /locus_tag="PXD18_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301465.1"
                     /translation="MIREVIDFIKNNKWYVLLVVLLLGLYFYQFHGGLSSDSEKWDHF
                     GSYIGGIFSAVTLLSVLHGMQLERKRFKEQKEEFENDKRVLEKRRRKEDF"
     gene            22583..>22871
                     /locus_tag="PXD18_001021"
     CDS             22583..>22871
                     /locus_tag="PXD18_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301466.1"
                     /translation="MMLEQHNLKISSIEGNIDNVYDMLITAYRFENARIYCEVGRLNK
                     EYANINSYFLNLYRMLRFIYNNKELNVNNEYSGLLRSFLSKKLLVILAFHLC"
BASE COUNT         6707 a         4459 c         4969 g         6736 t
ORIGIN      
        1 cggtgaaaaa agaccgcttg taggcaagcc cattgacaag cagtcagatt ttagggattt
       61 tttacaaaac tgtttatttg cgaatgagtt tcttctcgac agtttcttga tagaacgcta
      121 caataaccgt ctatttgtat atctttttta tatccctaaa ccgaggttta agaatgtcat
      181 tttcaattga aacattagaa ggcttaaaac gccgtgttac tattaacgta ccagctgata
      241 aaatcgaagc agcatacaaa gaacaattaa aaggctatgc gaaaaatgct cgtgtagatg
      301 gcttccgtaa aggtaaagtg ccacactcaa ttatcgaaca acgttttggt attgcagccc
      361 gtcaagatgt gttatctgat gaaatgcaac gtgcattctt tgaagccgtc attgctgaaa
      421 aaatcaactt ggcaggtcgc cctactttca cgccaaacaa ctaccaacca ggtcaagact
      481 tcagctttac tgcggaattt gaagtattcc cagaagtgga attaaaaggt ttagagaata
      541 tcgaagtaga aaaaccggtt gttgaaatcg cagacgctga tttagacaaa atggtagatg
      601 tattacgcaa acaacaagcg acttggtcag aaagccaaga ggctgcaaaa gccgaatctc
      661 gtgtaactat tgatttcgtt ggttcagtag atggtgaaga attcgaaggc ggtaaagcat
      721 cagacttcgt gttatttatg gggcaaggtc gtatgatccc ggggtttgaa gacggaatcg
      781 taggtcgtaa agcgggtgag caattcgaca ttgatgtgac tttcccagaa gaataccacg
      841 ctgaaaactt aaaaggcaaa gcagcgaaat ttgcaattac cttgaaaaaa gtagaagaga
      901 tggtattacc ggaattaacc gaagagtttg tgaaaaaatt cggtaatgca aaatcagtgg
      961 aagaattacg cgcagaaatt aagaaaaata tgcaacgtga acttaaaaat gcagtcactt
     1021 cacgtgtgaa aactcaagta atcaacggct taattgctca aaatgatgtt gaagtgccgg
     1081 ctgctgcggt tgaagaagaa atcaacgtat tacgccaaca agcggtgcaa cgttttggtg
     1141 gtaagcctga aatggcagct caattaccgg ctgaattatt tgaagcagaa gctaaacgcc
     1201 gtgttcaagt gggcttatta ttatcttcaa tcatcggttc taacgaatta aaagtagatg
     1261 aaaaacgtgt tgaagagatg atcgcagata tcgcttcagc ttacgaacaa ccggctgaag
     1321 tggttgctca ctatgcgaaa aaccgtcaat taactgaaaa tatccgcaat gtggtattag
     1381 aagagcaagc ggttgatgca gtgctagcga aagcgaaagt gactgaaaaa acaatgtcat
     1441 ttgacgaagt aatgtcacaa caagctcaat aatttcctta taaggtgggc ttttgctcac
     1501 cttttattac ttttacaagc ggttaaattt agtgataaat ttgcatcaaa acgaccgctt
     1561 attttttgat gttaaggaaa ttgaattatg gaacaactaa cttttgctca acaattagag
     1621 caattttttg ccaatcatac cttgatggtg tttgcttggg ttgcattatt gattgcggta
     1681 atttttagct tttataaaag tgcaacgcaa aaatataaaa ttgtcgataa cgcacaggct
     1741 acacagctga ttaataaaga agaggcagta gtggttgatt tacgttctga tgaagagttc
     1801 cgtgccggtc atattattga tagcattcac gtgttaccgt cagacattaa agcagctaaa
     1861 atcaatcaga ttgataaata caaagctcgc ccggtaattg tagtagacac taatgacttc
     1921 acttcaggtg gtgttgcggc agatcttgct aaacaaggct ttagcagagt ttatgtatta
     1981 aaagaaggga ttggcggctg gcgtgcagca agcctaccaa ctattaaaaa acataaataa
     2041 tctattatta aggaaatttt atgtcagaag aaaatcaagt tgcatcaaca gaagaagcta
     2101 cacaaacccc ttttgagctt caaattcaac gcatttatgt aaaagatgtt tcatttgaag
     2161 caccaaattt accgactatt ttccaacaag agtggaaacc acaattaggc tttgagttag
     2221 atactgaaac caaagaaatt ggtgaagatt tatacgaagt taccttacac attacggtgc
     2281 aaactacgtt agaagacagc aatgatgtcg ctttcatttg tgaagtaaaa caagcaggtg
     2341 tgtttactat taaaggttta gaaggcattc aacttgctca ctgcttagct tcacaatgtc
     2401 cgaatgtgct ttatccttat gctcgtgagc taatctcaag ccttgtgaat cgtggtacat
     2461 tcccggcatt aaatctctca ccggtaaact ttgatgcgtt atttatggat tatctccaac
     2521 gccaagaaga aagtgcagaa gagccggctt tagcgaacta agcattttag atagaaaata
     2581 ggtatgcaag gcatacctat ttttttacaa gcggttattt tttctactat tttttgcaat
     2641 tttctaaata agccgaacag aggaaatatg agtgaaatct attctgcccc aatcacggta
     2701 ttaggtgcag gttcttatgg aacagcttta gccattgccc tttctcgaaa tggtcacaaa
     2761 acctatttat gggggcataa tcccgacaaa atggccgttt tggcatcaga gcgaatgaac
     2821 caagattttc tgcctgatat tgtattcccg gaagccttag aaattgtcgc agatcttgct
     2881 acagcggtac aaaaatcgaa agatctgctg attgtggtgc caagtcatgt attctctgaa
     2941 gtattggctc aaatcaagcc ttttttgtcc caagatcacc gtataatgtg ggcaaccaaa
     3001 gggctggagc gagataccgg gcgtttgttg caaacggtag ctaaggaaat tttgggggaa
     3061 atttacccgc ttgcggtgct ttccggtccg acttttgcca aagaactggc ggcaggcttg
     3121 ccaacagcga tttcgcttgc ctcaactgat cctgtttttg ccgatcaaat gcaaaaacgg
     3181 agtcactgtt ccaaagcgtt ccgagtttac ctcaacaatg atattatcgg tgtgcaactc
     3241 ggtggggcta ttaaaaatgt gattgcaatt ggtgccggta tttcagacgg aatgggattc
     3301 ggggcgaatg ctcgtaccgc cttgattact cgagggctgg cggagattag ccgtttgggt
     3361 gtttcgctcg gggctgatcc gaaaaccttt accggaatgg cggggcttgg agatttagtg
     3421 ctgacgtgta ccgataacca atcccgaaac cgccgatttg gtttggcgtt agggcaagga
     3481 aaatcggcag aagtcgcgat agcggaaatc ggtcaagtgg tagaaggatt ttataatacc
     3541 aaagaagcct atttgctcgc tcaaacacag ggcgttgaaa tgccgattgt agaacaaatt
     3601 taccaaatgt tattttgtgg caaacaggct tcggatgtgg tgaaaacctt gttggggcgt
     3661 gaacgaaaag gcgaataaag aaaggagaat aaaatgcagc agagtgaaat taatcagatt
     3721 tggcaagcaa ttcgagatga agccaaagag ctggcgaatt gtgaacctat gttagcaagt
     3781 tttttccacg ctaccatttt aaaacaccat aatctaggcg atgcgttaag ttatattttg
     3841 gcgaataagt tagaaaaccc gattatgccg gcaatcgcct taaaagaaat tattgaggaa
     3901 gcttatcgag cagagccaca aattattgct agtgcagctt gtgatattaa tgcggtcaga
     3961 actagagatc ctgcggtgga caaatggagt acacctctgc tgtacttaaa aggcttccac
     4021 gctttacaaa gctatcgggt gacgcattat ctttggaatc aaggcaggaa agcattagcg
     4081 gtttatttac aaaatgaaat ttctgttgcc tttgatgtgg atattcatcc tgcggcaaag
     4141 gtcggttgcg gaattatgtt tgaccacgcc accggtattg tggtgggtga aacctctgtg
     4201 atcgaaaatg atgtctcgat tttacaaggt gtaacactag gcggtacagg gaaagaaaat
     4261 ggcgaccgcc acccgaaaat ccgtgaaggc gtgatgattg gagccggtgc aaaaattctc
     4321 ggtaatattg aaatcggacg ctattctaaa atcggggcaa attcagtggt gctacaacct
     4381 gtgcctgatc acgccacagc agcaggtgta ccggctcgca ttatcggcaa atcctctgaa
     4441 caaaaaccgg cttttgatat gaatcaatac tttgaagatg agcaaggttt gtttggtgat
     4501 gggatttagg taagagttat tcctttaatt tatgatttag acattgctaa gtacaagttg
     4561 caattaacct ttaatgattt tcagaactac tataatggta aaggggattt aactatgttt
     4621 tctttttatg gtaagaaaac atgggaaaat ggcatttatg tagggattga tggtagcatt
     4681 gggcgtgcga ataacaaatt aagccatcaa agccagacga taaaactagc cagaaatgta
     4741 tattctttag gattaacggt aggtaaaacg ttggaagttg caagttttaa cctacaaccg
     4801 tcatttggta tgcgctatca tcatttaaca tctgcaaatg cccaattaga gaacacaaaa
     4861 tttgagactg atagggtaga tcttttggcc attcaagctg gtttagcatt aaataaaact
     4921 tttatattta atgaattaaa ggtaaaacct gaattaggaa gctattttgt tgatgcaagc
     4981 cacggaacac ttaaaactaa gttaaatgaa ttttccttaa atcaaaatat aggccgttat
     5041 tttaagcaag aagtagggat tacactccac tataaagggg tatcaagttc ggtacatgct
     5101 ggctttacaa aaggaaatac attacaagaa caaaaattca tttcactcaa agttggatat
     5161 gagtggtaag ctttatgtaa cctgaagcta cacttgaatc ggttcaaaca taatgttact
     5221 aaaaaagcct tgaaacattg attttcaagg ctttttaggt atcggttgaa ccgtatagga
     5281 ttataatttg gtgctggggt catctgaatt gtatcacttc aagcattgat aaataagggt
     5341 tttggttaat tcaaatttta tttgtactcc taaatatact cctaaaattc aaagtgcctt
     5401 attgcttagg ctattttgtg tacaattatt cggatcgtgt atagggaaat ttagttcgta
     5461 gttttctata gtagtttaag tttataaaga aaaaatttaa aactttttga aattttaccc
     5521 actttaccca ctgatttgtt ggaagccttg atatataagg ctttatagcc agtgggaagc
     5581 aagtgggtta cagtgggtta agtgggtaac tttgattttt acccactgtt agccactttt
     5641 agaggggaaa tattagcggt tttggtagtg gttaaagggc aaaaaaggcc ttaattctca
     5701 tcaacggctt aaggttcggc tagaatatca gggcaagcac tttggcggat tgcatttttt
     5761 aggaagcgtt tatatctagg cgttactgat tttgacgata gtacgccttt tagtatttgt
     5821 tgataggctt catcattaat tagggctttt tgaatgaaat aaccggcttc tatatttgcc
     5881 ttaatctcat ctaacgaatc gattcttata tggcggtaga aaataaagct gtcccgtgtg
     5941 ataaattcgt gtgttcctgc ctttaaaata caagtttcat caagtgcttt cccgtcttta
     6001 atgcttgagc agtttacact taaaatcata tctcctttac cggtttcacc atcaaagcac
     6061 ggatcggtaa cctgcttatc cagccctagc aacttcgctt tgcccattgt ggcttgagtc
     6121 attgcgttag ggttttcttt ctctctcgcc agtatacgag cctcttccag ctcctttaaa
     6181 aggtcatcaa cggttaattt atggcgttct gcgtgttcgg ctttcagttc ctcaatcctt
     6241 gccgtaatct tgccgttatc cattagctct ttagcttttc ggtggacggt ttcggacttc
     6301 atatcttcgg tttcataggc ttggcggtag gcttcgctag cattgccggt ttcaatataa
     6361 gcaaagcaaa aagcctcttg ttttggtgtg agttcggtca ttctttcccc tccgccattc
     6421 gcttttcagc aaaggcataa tcgatttttt ctcggtattc tttgctcatc tgctcccgtg
     6481 taatttcgtt gccgtgtcgg tcaataaatg ggtttgttcg ttgtgggtgg gggagcttgt
     6541 tgatttcact caataagtca tcattcacta atagcggcgt ggcggttagc tgttgatgat
     6601 aggcaataat cgctagagcc tctaaaaagc ccgtagcccc tgccatttca atattgatat
     6661 gatcttcaag gtcaagagaa agcacaccga taaaaaacgg tctgccgtta tcgtggtgca
     6721 gtcgttcaat tcggatatgc ggaaaatcta aaaagctcaa ggttgctttg ataggttcat
     6781 tcattaaagc agtaataccc gctaaattaa gctcgtgttt cattttggtt tattccttta
     6841 ttctttccgc cacttttaac agttggctaa gttgttttct taaaatgccg agtgtgattg
     6901 aatcggtttc gcttggcatt gcgttatgtt gttgttccag cttcgctatt cggttgccta
     6961 gcacaattaa aagctcgggc aatgggtaag ctcggtttca gaatagaggc ttaaaaacgt
     7021 gaatagtctg ctaaataatc aggtgttatc tcagaaaaat cgagcttttt ccctagtgct
     7081 gcttctaatt cttgtttatt taaaagtaaa ttttggaaat catttaaatt cattgctgcc
     7141 acctagaacg gaatatcatc atcaaaatta aagctgcttg attgtttttc atatccgtta
     7201 ttaattgcta caaaatcaaa ggctgctttt aaattagtat tatctttatc aatgcttgga
     7261 cttattccgc catattgtcg ataaagctgt atatttttat ctttgagtaa gcggtttaaa
     7321 tcgttagctg tttcactaag acttgagtaa tgtttacttg cccattctat gaagtcataa
     7381 acagaaatat aatcattttg aatttggcta atctctgatt gtgtttgctt ggtggttaat
     7441 ttatctaaca aggttggcga ttgtgtttta atcagctgtg ttatttctct tgctgttacg
     7501 taataagcat ttaaatgttc aacatcaata gaattttgag caataacatc acttaaaacg
     7561 cctttaggct gatcgaaagc gtctttgaaa tgtagtgttt tgggctcaat agcatagctt
     7621 tcaccatctt caaagagagt gcaatttaca aaagcattcg tatatattcc attttgctga
     7681 aaggaaaaaa tgaggctttt caatttatcc gctatatgtg aaaaaggttt atttgtatag
     7741 tttgataatt cttgtatcag ttcttgaaag ctgattttgg gctcaatacg attttcaagc
     7801 ctagaaataa attgactgtg atctgccata agcgcccctt taacgtatcc ctttactgtg
     7861 agagcgtgga aagagaaata aagggctttc tcctttcgtg ccggttaatt actccgccac
     7921 tatccacgct aatttgaata aatccgtata gttacggatt gaacttgata ggttgtattt
     7981 tgctaattat tcagataaat tacaagtaat aagctgtgtt ttattacagt aaatcaaaat
     8041 aggctaaaga tgggtttccg gacgctataa aaaagagcat tcaagcggtc atatttcatt
     8101 aaggttttgc gaatagtgcg gaattttcgg agcagtacgc acgcaaggag caaataaaaa
     8161 gccgtcaata tccatcaacg gctatttaaa agtgaggttt tgacaggtag caagtgataa
     8221 gttttagcca tttttgactt gtggaataag cactaaattg aatgccccta gaattttttg
     8281 aatagtgtca aagcgtggtt tgctgccttt ggctagggtt ttatataggc tctctctgcc
     8341 tagccctgtt tgcttggcca gctccgccat tcctcttgct cttgctacat cgttcaaggc
     8401 ttctaaaaat tcgtcttggt cgccctcttt taacacttcc gctaaatagg cttgaatagt
     8461 tgcctcatcg gttaaaaact ccgccacgtc aaaagggcgt aaaccgtgct tttctgctgc
     8521 ctgttcattg atttgtattg tttccattgc tttctcctgt agtttttaat tcagcccata
     8581 atgctttcgc tttctctata tcggcttgct gtgttgattt atcgccgccg tgtaacaaga
     8641 tataaattac atttccttgt tatgcgtaat aaattctata tccggctcct gttgctatcc
     8701 gcatttcata aagtccgcct gtaccggcta aagatttatg atcgccaaag ttgccattaa
     8761 tcgcattttt tatccgtctt gctaccgttg cttttgcgat agggttcttt aaattctcaa
     8821 gccattttga aaaattatcg gtaataataa tttgattagt ggtttgctct ctcatcattg
     8881 ccggcttctt attctattta ttgcttattg tatccattaa gatacagtga gcaagggttt
     8941 ttgccattta cccactttta acccacttta cccactgtca ttttttcttt atttttcagt
     9001 tagttataaa aaaataatag tgaaaagtgg gtaaagtggg taaaaatcga aaagtttaca
     9061 gaattttcat caaggggaat tacgggcata aaaaagccgt caggcggttt acctaacggc
     9121 attacaagcg gtcatttttg gcggaaaatt tactaggcta ttttcaaatg atattgcggt
     9181 aagctacctt gcgaacattc ctctacaaaa tccgcccaca cttggagcag tttaaaacgt
     9241 tgctctaggc gttcgcctct atcataggcg gctttgattc ggtcgctgtt taaatgcgat
     9301 aaggcaacct cgattaaatc gctattgtag cctttctcat taagataagt ggaggcgatg
     9361 gcccgcaagc cgtgagccac taatttgccc ttgtagccca ttcgtttgat cgcaccgttg
     9421 gcggtttgag tattgacgtg cgtttgtggg ttcttcacgc tagggaataa atacgtttta
     9481 ccgccactta gctttttaat ctctcgcaaa agtgcgattg cttggcgtga gagtgtgatt
     9541 ttatgctcaa tgcctcgctt catattttcc gccggtatcg tccacagttt ggctttttcg
     9601 tctatatccg cccattttgc cttagccgct tcattcgggc gggtcattgt gagtaactgc
     9661 cacagaatta aatagcgtgt ctgtaaatga atttgggcgt tttgtaaggt gtataaaaac
     9721 tcgcctaaat cttccggctt aatggttttg aaatgttcaa ccgttgggct atcaaactct
     9781 ttcgcaatat tggcggtagg gttaaacggt atcatttcac ggtgtacggc aaacatcata
     9841 atttcattat gtttttgaat tgcccgtttt aacttctcta gtttgccctc gtcttggtat
     9901 tgcttgaatg ccttgattgc cattggtgcg gttatttgtg tgataggcat tcttccaaag
     9961 tgcggcaaga ggttattttt aattaaggcg attacatctt tttggtagtt gtctgaaaaa
    10021 ttcttcttgg tcttgcggtg ttccagccac gcccacgcta cattttcata agtgttgctg
    10081 atttcgttgg cctttgcctg ttcctgttgt tggcggtggg tttgagggtc gatattttga
    10141 gccaataatg ccctatattc ttctctaatt tctctcgctt gtgctaaaga aatatcaggg
    10201 taagccccaa tgcttaaatc attccgcttt tttgtgaacg gtctttcata cctaaaccgc
    10261 cacaatttag aatttgaggt aataacaagt agtaagccgt taccgtctct taatgggctg
    10321 tcttccggtt tcgcttttct tatttgggta tcgtttaacg gtgtgatttt tctagccata
    10381 gtaaaccttt aggagtataa agcctaaatc ttaggagtat gattttttgt ttgggagtac
    10441 aaaactaaaa gcgataaagc cttatttgaa aaggctctaa agtggtttta ggagtacgaa
    10501 tttttggggg tattccggcg tactcctaaa tatactccta aaatcttcgg atttgattgt
    10561 atcgtatagg tacgcaacgg acaataaaaa agccttgaaa cattgatttt caaggctttt
    10621 taggtatcgg ttgaaccgta taggattata atttggtgga gctgggggga tttgaacccc
    10681 cgtccgaaat ttctctacct tcagtactac atgtttagtc tagtctttaa tttcgcttat
    10741 tcacagcgga cagacacgca atgaataaac tagctttatt taatttagtg tttcgatcct
    10801 aaagcggcgg cgtccacacg atctcgtttt gggtgactta tctttgccct cgtcttacga
    10861 gcggaagctg aggagataag gctttaaagc aggttattaa gctgctaaag cgtattgttc
    10921 gtcgtttgcg actattattt tgcggtttgt ttacgaggcc taccgcacct cgacatgcac
    10981 cttgggcttc gccaatcccg tcgaatccaa aatcagcccc aaaagtagcg gtattctaaa
    11041 ggaaagcggt cgaatttgca aaaagttttg caagtggcgg aacttagcgg tattgaatag
    11101 ctcgaaataa aatcatacaa atcccacacc agatagattt aactctgtta taatgtaaac
    11161 cttgctgaga gtgaagagaa atagaatgaa aaaatttaac gagaacgaga ttgaagatgc
    11221 tgaaattata gatgccgagc cgattgatgt tgatgagata gacgaagaag aaacatcggt
    11281 agaagcaatg catccggctt tggtttccgg ctcaatgcct gtgccgcagg gcaatttgga
    11341 tagctacatc cgaatggcaa atcagtatcc gattctcacc gccgagcaag aaaaagaact
    11401 ggcggagcgt tattattatg atgaagacgt tgaggcggca aaacagctga tcctttccca
    11461 tatgcggttt gtgatccata ttgctcgtgg ctatttgggc tatggtttac cgctggcaga
    11521 tctgatccaa gagggtaata tcggcttgat gaaagcggta aaacggtttg acccgaatgt
    11581 cggcgtgcgg ttggtttctt ttgcggttca ttgggtgaaa gcggaaattc acgaatatgt
    11641 gctgaaaaac tggcgaattg tgaaagtggc aaccaccaaa gctcaacgta aattattctt
    11701 taatttacgc aaaaataaaa accgcttggc gtggtttaat gaagaagaga tcaaaaaagt
    11761 tgccgatgat ttaggggttt cagtggaaga agtacgagaa atggaatctc gaatgaccgg
    11821 acaagattta ggttttgacc tgcctgccgg tgatgacgat gaagacagct acgctccttc
    11881 tatgtatatt gaagatagca gctccaattt cgccgatgac ttggaagacg aacaacataa
    11941 tgggcaggca accgctcaac ttgcctatgc gttagccacc cttgatgaac gtagccaaga
    12001 catcatcaaa acccgctggt tagatgacaa taaagccaca ctgcaagatt tagccgataa
    12061 atataacatc tcggcagagc gggtaagaca gcttgaaaat gccgcattga agaaaatcaa
    12121 ggaagcgatt tcattagacg gctagaaatg cctacaagcg gtgatttttt tactcgctac
    12181 gctcgcactt cgtgccgtcg gcagagccaa cgttcaaacg caagcgtttg tgcaaaattt
    12241 tacgcaaaaa gcaccgcttg tattttgact aaaaatgagg atactatgat taacattacc
    12301 gataaacaaa ttgacccaac tttctaccag cgtctaccag cgagcagacg gctttattaa
    12361 cgttgccaac gctcatttaa aaaacattgc cccaaaccaa gtcagcaatg cgatgttgtt
    12421 tggttgtgcc agatttaacg cctatgttgc ggcaagcaag gcggaatata aacagcagtt
    12481 ggccgattcc agagaagaag ttattcaata ttttgtggag caatacaaag aaatgctcac
    12541 tgcaaattta gatgaatata tccaaaactt cgagcgatat attgaaggga aaaaggcgga
    12601 ttaaccgcct ttgttttgtg gtcaaacttg ttttacaaaa tcacttaaaa cttgattaat
    12661 tctactttgc caacctttac ctgaagctct aaaggcttca agaacgcttt tatcaagacg
    12721 taacgaaacc aattctttct ttgaaccagc tggtctgcca cgttttttca ttgcaattga
    12781 aaactctgat ggcgtaaccg ggcgttcatc gtcatctttt ccgtcccaaa taaaatcttg
    12841 gcttgccgga atagcttgaa tagccataag tagctgtttt ttctctaaat ttttattatt
    12901 caaagtattg ttgtaagtat tcctaatatg cctctctttc tgctttagat gctcgccgaa
    12961 agctaattac tctgatgtaa tcttcccttt ctgtatatgc aagtgataat acgagtaaac
    13021 gtccaaatga atatgcaaaa gattgtattc taaattcatt gttacgaata acttcaacat
    13081 caaatcgata gggcgatgag agaacttcat ctgcatcggc aaaatctaat ccgtgcttgg
    13141 ctaaattgat tttgcgttta gtttcgtccc aagtataaat tttcataatt attgtatata
    13201 cataaaataa atctaacaag aactaaattt aatttagcaa acagtaattt gaaaatcaga
    13261 ttagaaatac attttttcga tgcagatcgc aaaaataaaa tgaaatttaa ctgcttgaag
    13321 agtctactga gccattttcc ccgctaccgt taaaaaacca tctgcggttt taaaaatttc
    13381 accgaatcct tgagcctcca aaatttggtc ggagacttca cgaaacgccc cttcaccacc
    13441 ggctttttgc aatacccaat ctgctttttc tttgatgtaa tcgagggcgt tacgggttgc
    13501 aatcgcaatg ccacacactt caaaagccgg taaatctaag gtgtcatcac caatgtaagc
    13561 cgtttgctca ggggtaacac cggcttgctg cattagctca aagcaggcgg agcgtttttc
    13621 cattttgcct aacaaagcga gatcaatttt cagcacctct aaccgtttgc ggagcaaagc
    13681 cgtatcgccg cccgagagta ctgccacttt aatgccacaa ctttgtaaca tcttaacgcc
    13741 taaaccatcg tgaacgtgga aacgtttcat tacttcgcct tggtcggtgt agtacattcc
    13801 gccatcggtt agcacgccgt ccacatcggt aatcactaat ttaatcttgg tgagatctaa
    13861 catttttttg cctcaaatat ggtatgattt taccattata gcttttttac ctccgtttac
    13921 caaaggaacc gaaatgtcga ttgccgagaa tttatcgcaa atccatcaac aaattcagca
    13981 aatttccgaa caatatcaac gagataacgt gcgtttgtta gccgtctcca aaactaaacc
    14041 agttgaggcg attcaagcgg cgattgaggc agggcagcgt gcatttggcg aaaattatgt
    14101 gcaggaagcg gtcgaaaaaa tcgaattttt tgcaaatcgc cccgaattag aatggcattt
    14161 tattgggcca cttcaatcaa ataaaaccaa attggtcgct gcctattttg attggattca
    14221 aacggtggat agattaaaaa ttgccgagcg tttaaacgaa caacgcccag cggataaagc
    14281 cccgctcaac gtgctgattc aaattaatat cagcgatgaa gcctcgaaat cgggcattga
    14341 accagatgaa atgctaccac ttgcccaagc gatttctcaa ttaccgaatt tgaaactgcg
    14401 gggcttaatg gccattccca aaccagaaag cgagccagag caacaaaaag ttgcctttcg
    14461 caaaatgcag ctacttttta accgcttgca aacagaattt gacgacattg ataccctttc
    14521 aatggggatg tcggacgata tgcaagcggc gattgaatgt ggctcgacaa tggtgcggat
    14581 tgggactgcg atttttgggg cgagacgtta gccagctgag tttttacata aagctgatac
    14641 aagcggtcaa attcgccaaa aactttgcaa attccaccgc ttgttttgta gccaacagcg
    14701 gaaaaagtct gtataattac gcctcctaat ttcttgactc tcgccagttt tgatgggcga
    14761 gagtttttat tttgacttaa cttaaagata ttccaatgca aaatgtagat atttcaaaat
    14821 tgcgtaacat tgcaattatt gcccacgttg accacggtaa aaccaccttg gttgataaac
    14881 ttttacaaca atcaggcacc tttggtgaaa ctcgtggtga cgttgatgag cgtgtaatgg
    14941 attccaacga tcttgaaaaa gagcgtggca ttaccattct tgcaaaaaat acggcaatta
    15001 actggaatgg ttatcacatc aatatcgtag ataccccagg gcacgctgac ttcggtggtg
    15061 aggttgagcg tgtactttca atggtagatt ctgttctgtt agtggttgat gcctttgatg
    15121 gcccgatgcc gcaaacccgt ttcgtcacgc aaaaagcgtt cgctcacggt ttaaaaccaa
    15181 tcgtagtgat caataaagtt gaccgcccag gtgctcgccc tgattgggtg gtggatcaag
    15241 tgttcgactt gtttgtaaat ttaggtgcaa gtgatgagca gttagatttc ccaattatct
    15301 acgcttcagc cttaaatggt gtagcaggct tagaacacga agacctagcg gcagatatga
    15361 ccccacttta tgaagcgatt gtcaaacacg ttcaaccacc acaagtggaa ttagatgcac
    15421 cattccaaat gcagatttcg caattagact acaacaacta tgtgggcgtt atcggtattg
    15481 gacgtatcaa acgtggttcg gtgaaaccta accaagcggt aacgattgta gatagcgaag
    15541 gcaaaactcg ccaaggtcgt atcggtcagg tgttggggca tttaggttta caacgttttg
    15601 aagcaacaga agcctttgct ggcgatattg ttgcgattac tggtttaggc gaattaaata
    15661 tttcagatac tatttgtgat attaacgcag tagaggcttt accagcatta agcgttgatg
    15721 aaccaacggt aacgatgttc ttctgcgtaa acacctcgcc attctgcggt caagaaggta
    15781 aatttgtgac ttcacgccaa attcttgagc gtttaaacaa agaattagtc cacaacgtgg
    15841 cattgcgtgt ggaagaaact tcgaacccag acgaattccg tgtgtcaggt cgtggcgaat
    15901 tacacttatc ggtattaatc gaaaatatgc gtcgtgaagg ttacgagtta gcagtgtctc
    15961 gcccgaaagt aatctaccgc gaagaagacg gcaaaaaaca agagccgttt gagcaagtga
    16021 cgattgatat cgaagagcaa caccaaggtt cagtgatgga agcacttggt atccgtaaag
    16081 gtgaagtgcg tgatatgatt ccggacggca aaggtcgtac ccgtttagag tatgtgatcc
    16141 caagccgtgg cttaatcggt ttccgtaacg aatttatgac gatgacctca ggtactggtt
    16201 tactttactc tacattcagc cactatgatg acgtaaaacc gggcgaaatc ggtcagcgta
    16261 aaaacggtgt gttaatttct aacgcaacgg gtaaggcatt agcatacgca ttatttggct
    16321 tacaagagcg tggaaaatta atgatcgacc acggtgttga tgtatatgaa gggcaaatta
    16381 tcgggattca cagccgttca aacgatttaa ccgtaaactg cttacagggt aagaaattaa
    16441 ccaatatgcg tgcatcaggt aaagacgatg ccatcgtttt aaccacaccg gtgcgtttca
    16501 ctctagaaca agcgttagag tttattgacg atgacgaatt agtggaagta acaccacaat
    16561 cggtgcgtat tcgtaaacgt ttattaactg aaaacgaccg gaaacgtgca agccgtacta
    16621 caaccagtac cagcacgcac taactgataa aaaagagcga ctgaggtcgc tcttttggtt
    16681 ttaaattctc cctacaaata taacgccatt accaccgcat tttctttgct accgtttggc
    16741 gtggggtaat agtttttgcg ggtggtaact tcattaaaac cgagtgaatc gtagagtttt
    16801 ctggcagaat ggttggattc tcgcacttcc aaccacaggg tggtgagttt ccgttgttgc
    16861 agttgcaaaa ttaattcgga aagtaaccgc ttgccaatgc ctttgccttg aaaatcagga
    16921 gcaactgcaa tgttaaataa ggttgcttca tctagcacga tatgactaat ggcaaaagcc
    16981 acaattttgt tttgctctac cacttttaaa ttcaggtatt tttcaccctg attatttaat
    17041 aacgtcccct ttgaccacgg cactaaatgg gcttgttgct caatttcaaa taactgctcg
    17101 aaatcttccg cttgaatttg ctcaatcacg ctgttctcca aattgtgccg aaaaagtatc
    17161 aatttgttgc caaagttggc gtttggtcgt agatttggct aaatcttgcc aagactcgtt
    17221 tttccaagcg gtctgattag taaaactttt tgccattttg accgcttgtt cttccgcttg
    17281 aatcagccaa aagatcggcg aatgctcaaa caccaaacgt tgtgattgtt cgccagtcag
    17341 ccattgatat tcgctgtttt ttaactttaa agcacgcaga atatcggcaa agagccggct
    17401 gtgttggtga tcttcctcac acactaccac caattttacc gcattgttta ggcggatttg
    17461 agcatcgcct tttagcactt ggggattggt tagcacccat tgcgaaatac ccatttcctg
    17521 taacagtaaa tcacgacgat tcatttaaaa cctcatcaaa ttttgcaaat agtatcaaaa
    17581 ctccgcttga acagaaactt ttttcaaaaa attcaagatt tctgtactta aattcggtat
    17641 attcacgcta aattttttag ataaggtaag aaaatgctct ctttagaaag cgaagtactt
    17701 gaacgccatt tggcgttatt tgaaaacaag tcggtgttat tatttggcga tgtgcgagat
    17761 gattttgccc gccagctgca atctcgtgcg gaaaaggttg cggtattcag tagctatttt
    17821 gattacgcac gccaccatag tgaggttgaa tttggcttag aatgtggttt gagtgccgag
    17881 ttagcggtgt tttattggac gaagaacaag caggaatgcc aattccaact gctacaatgg
    17941 ctgtcgcaat gccaagcagg gcaagaaatg ttgattatcg gcgaaaaccg agctggtgtt
    18001 cgttcggtag aaaaactgct cgaaccgttc ggcaatattg ccaaaatcga ctctgcacgc
    18061 cgttgtggtt tataccattt tgagctacag accgtgccga cattcgattg caaaaaattc
    18121 tggaaatcct accgcttgca agacttagat gtgttcgatc taccagcggt ttttagctcg
    18181 gcggagctgg ataacggcac caaattattg ctttcaacct tcgacaaagc agacaggcta
    18241 aaaggcaaag tgttagattt aggctgtggg gctggcgtga ttggggcaac gctcaaacaa
    18301 caatttccga aaatcaaact gacgatgagc gatattcacg caatggcgtt ggaatccggc
    18361 agacgtactt tggcggaaaa tcagttagag ggggaagtgg tagcaagtga tgtgttctct
    18421 cacattaatg aacggtttga tttaattgtc tccaacccac cattccacga cggggtcgat
    18481 accgcctacc gagcggtgga ggagttgatt ttccaagcta aaaatcacct aaccaaaggc
    18541 ggtgagctgc gaattgtcgc aaacgcattc ttgccttacc cagatttgct cgataaagcc
    18601 ttcggcaaac acgacgtact ggcaaaatcc accaagttta aggtgtattc cgcaagaaca
    18661 taataggcag aacaaacggt tataaaaaag ccggtatttg cttaaaaaag tgcttgatat
    18721 ttctgccggc ttgacgtaaa ttctgttcat actgttttgg agtaatgcaa tgaatttaaa
    18781 ctacacttta catcaccacc acactttaac ctgatatctt tcgggcattt ggtgtgtgcg
    18841 gaagataact cttccgagca agtgtagcaa atcaataaag atctctcgga aggcaacttt
    18901 cgagagattt ttttatagat aaaatttggg aataatatga aaaacccgat tgaaatttac
    18961 caaagccaag acggcaaaac ccaagtttcc gtgcagtttg ataaggaaac ggtgtggcta
    19021 agtttacagc aaatggcaga tatttttgga cgagataagt ctgttatttc tcggcactta
    19081 cgaaatatct accaagaagg tgaactggag cgtgaggcaa ctgttgcaaa aaatgcaaca
    19141 gttcaaattg aaggtgctag agaagtcgtt cgcctaaaag actatctggt gaaaggctat
    19201 gcccttaacg aacgccgttt gcaggaacga ggtatcgagt ttgagcaggt gattggtttg
    19261 ctcagtcaat acactggttg tcttagcctt gttggtggca gaaagtttgc ctgaacaaaa
    19321 agaactgatg attaaactga ttgaacactt tattttatta aaagcataac aggaaaaaat
    19381 atgagtatta atatttcgcc gttagcctcc aaaaatctca ctgaatggaa actattgtgg
    19441 caacaatatt tagattttta tcaagtgaat ttagcagatg atattattca atcaacttgg
    19501 cagaaagttt cagagagtga aaatgtaaag ggatttgggg cttttgttga taacagaatg
    19561 gttggttttg ttcatattgt gattcaccca aatacttgga atttaactga atgctgttat
    19621 ttggaagatt tatttgtttt agctgaatat cgcaaccaag gcataggaaa agaattaatt
    19681 gaatatattt atcgatatgc acaggaaaaa ggatataacc gagtatattg ggtaacagat
    19741 aaaaacaatc atcaagcaca acagctttat aataaattag ctaatgatag cggtattatt
    19801 caatatcgaa aaaatttcta aactatgtat aaattataca ggaacacaat atgacaattt
    19861 cacaactttc ccgtaaaaac attcaagctc tcacccctta ccaatcggca cggcgtttgg
    19921 ggggtagtgg cgatgtgtgg ctgaatgcca atgaatatgc cctttcgcca aactttgatt
    19981 taaccgaccg cacttttaac cgctaccctg aacctcaacc gcaggcggtg attgaaggtt
    20041 acgcccgata tgcaggcgtt gcacctgaaa acgtgctggt ttcccgtggg ggcgatgaga
    20101 gcattgagct gattatccga gccttttgcg aggcaaacga cagcattctc tactgcccac
    20161 caacctacgg aatgtacgcc gtgagtgccg acacctgtgg cattgcgacc aaaactgtgc
    20221 ctttaaccgc cgatttccag ttggatttag cccaaatcaa agctaacctc gagggcgtga
    20281 aagtggtgtt tgtgtgcagc ccgaacaacc cgacaggcaa cttaatcaag cggtcggatt
    20341 tgttcgaact tttgcaaatc accgcaggca aagcgattgt ggtggtggac gaagcctaca
    20401 tcgaattttg ccctgaagct cgcttggtaa gcgagctggc gaatttccca catttggcga
    20461 ttatccgcac cctatccaaa gcctttgcct tggcgggttt gcgttgtggc tttaccttgg
    20521 caaacgctga gctgatcggc gtgttacaaa aagtgattgc cccgtatccg ctgcctgtgc
    20581 ctgtttccga catcgccgcc caagccctct ccccacaagg cattgagcag atgaaaaccc
    20641 gtgtggcgga agtcatcacc ctgcgtgccg aattgcaaaa aaatctggaa aacttaccgc
    20701 ttgtagaaca agtttttgac agcgaagcca actacctcct attcaaatgc caagacggac
    20761 aaaaagtctt caaagcactt tgggagcaag gcattatttt gcgtgaccaa cacaaagcgt
    20821 taggattgca aaattgcatt cggattacgg tgggggcgag agaggagaat ttgagggtgg
    20881 ttgaggcgat tacagcactg agccaatttc agagatagaa tttaacgagc agtattttaa
    20941 gagacattta tagcctagca cggcatagcc gtactaggtt acgcataagt cagtcccttt
    21001 gggactgaat acagagaggc aaagtctctc actaatgctt aaccccatat gccttggcgt
    21061 gtggggagag taatgaataa gatacagata caggagaaac caatgcaacc cacccttttt
    21121 atcgaccgtg acggcacgtt aattgatgag ccaaaaaccg attttcaaat cgacagcttg
    21181 gaaaagctga aattcgagaa aaacgtgatt cctgccctgc tcaaactcaa gggcaaatac
    21241 cgctttgtga tggttacgaa ccaagacggc ttaggcacga gttcgttccc acaggcagat
    21301 ttcgacaaac cgcacaatgc aatgatggcg ttgttcaact cgcaagggat tgaatttgat
    21361 gatgtgctga tttgtccaca caagcccgaa gacggttgcg attgccgcaa accgcacacc
    21421 aaactgctac aaaaatatat cgaccgccaa ctgttcgacc cagccaacag ctttgtgatt
    21481 ggcgaccgtg ctaccgatgt gcaactggcg gaaaaccttg gcattcgggc gttgcaatat
    21541 caccctgaaa aactgaactg ggatttgatt gctgaaaaac tactgggcga agccgtcacc
    21601 aacattggcg agcgaccaaa gcgctttgcc gaagttatcc gtaaaaccaa agagaccgac
    21661 atcaaagtgc aagtgtggct ggacgaaaca ggcaacaacg aaatcagcac cggcgtgggc
    21721 tttttcgacc atatgcttga ccaaattgcc acccacggcg gttttagaat gaacatcacc
    21781 accaaaggcg acttgtggat tgacgaacat cacacggtgg aagacaccgc cctcgccctc
    21841 ggcaccgcat taaaacaagc gattggcgac aaacgcggca tcgcccgttt cggcttcgtg
    21901 ttgccgatgg acgaaagccg tgcggaatgt gcgatggact tatcaggcag acctttcatc
    21961 aagttcaaag cggatttcaa acgcgacaaa gtgggcgatt tcagcaccga gctcaccgaa
    22021 cacttcttcc aatccatcgc cttcacgatg ctcgccaccc tgcacatcaa ggcaaaaggc
    22081 gacaacgacc accacaaaat cgaaagcctg ttcaaagtct tcggcagaac actcagacag
    22141 tgcattcgta ttgaagggaa tgaactacca agcagtaaag gtgtattata atcaccgtag
    22201 gggcgggttt taacccgccc gaaagtgcgg ttgaaatttg caaagttttt ggggattttg
    22261 accgcttgtt ataaaggata tattgatgat tagagaagtt attgacttta taaagaataa
    22321 taaatggtat gttctgttag ttgtattgtt attaggatta tatttttatc agtttcacgg
    22381 gggattatcc tcagatagtg aaaaatggga tcattttggt agctatattg gtggtatatt
    22441 ttctgctgtt actttattga gtgttttgca tggaatgcag ttggaacgta aaagatttaa
    22501 ggagcaaaaa gaagaatttg aaaatgacaa aagagtatta gaaaagagaa gaagaaaaga
    22561 agatttttag cgtacatttt ttatgatgtt agagcagcat aatcttaaaa tttcatcaat
    22621 agaaggtaat attgataatg tttatgatat gctaattaca gcatatagat ttgaaaatgc
    22681 taggatttat tgtgaggtag gaagattaaa taaagaatat gcgaatataa attcctactt
    22741 tcttaattta tatagaatgc ttagatttat ttataacaat aaagagttaa atgtaaataa
    22801 tgaatattct ggtttgctta ggagtttttt gtcaaaaaaa cttttggtta ttttagcctt
    22861 tcatctttgt g
//
LOCUS       DANLXD010000032        22792 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.032, whole genome shotgun sequence.
ACCESSION   DANLXD010000032 DANLXD010000000
VERSION     DANLXD010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22792)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22792)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22792
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.032"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            9..236
                     /locus_tag="PXD18_001022"
     CDS             9..236
                     /locus_tag="PXD18_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIB"
                     /protein_id="HDL6301467.1"
                     /translation="MILEIINALGNKENIKQVEACLTRLRVVLHNNGLLNKSALKKLG
                     AVDVIKVGDTQQIIFGAKAGQYRDEINALIG"
     gene            complement(280..1104)
                     /locus_tag="PXD18_001023"
     CDS             complement(280..1104)
                     /locus_tag="PXD18_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDL6301468.1"
                     /translation="MNGPTQLAHFQEQIRKEYDGLSKRLKQVAQYVLDNGNSVVFDTV
                     STIAERADVPPSTLIRFANAFGFSGFNEIKQLYRQDMMEGTSRYTERVQLFRQIEPLD
                     EQNSELNHILDVFVQGNTQALQQLSTQVSEEQLAQTVDILHNAKRIFIVGLKRSFSIA
                     NYLNYALHHLDYDVFMIDGSGGMFDEQLSRIREGDAVIAVSFSPYANETLNVVTATAR
                     PGVKHIAITDSQLSPLLSFSDVSFIIKEAQVSGFRSQCATMTLAQTIAVSLALKKA"
     gene            complement(1242..2582)
                     /locus_tag="PXD18_001024"
     CDS             complement(1242..2582)
                     /locus_tag="PXD18_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDL6301469.1"
                     /translation="MSVSQRFIDFMNAHVAPVARRMENQPHISAIRDGFIVVLPFLIV
                     GSFIMILLIPPFDENTQNAFGQAWWRFANWASPYGWNFFQMSFNAISLFTSASIAYNL
                     AKAYKREPLPAAFLSVMAFLLVAAPVKDGMMDIKFFGGIGLFSAIFIAIYSVEMTRLL
                     EFLKIKIRLPKEVPHAVAESLNIVIPILAILLTLYPFAIWVESATGRNIPQLIMDFMA
                     PLIAVSDSLGAICLFVIATHLLWFLGINGSLVLMQLWTPFLLQNMAANLAAFQAGEPL
                     PFIITNSFWDFYIVHGASGGVIALAFLLVRSKSAHLRSIGKIGLVPSFFSIGEPIVYG
                     VPMVVNPLFFIPLIFAPLANAVIAYLILDFNLIHRVYLMAPWTTPAPIGAYLVSAGDI
                     WAPILSIALIILDIVIYYPFFKMYEKVCVEKEKAQNLDEKAQQELLEKARMAAQ"
     gene            complement(2585..3925)
                     /locus_tag="PXD18_001025"
     CDS             complement(2585..3925)
                     /locus_tag="PXD18_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HDL6301470.1"
                     /translation="MSCNTSPKRFHASWESIKQHQVPEWYEDAKFGIFIHWGIYSVPA
                     FAPPTCQLGEIDIDEQWFCNNPYAEWYFNSINVKKGPTYEHHIKTYGESFAYNDFLPL
                     WKAEKWQPAEWAKLFAKAGAKYVVLTTKHHDGFCLYPSKYTDFNCMQAGPKRDLMGEL
                     TENVREQGLKMGAYYSGIIDWTYSSAPIFTESQNFSNACPTYEYADYAYKQVVELIDR
                     YKPDVLWNDIGWPKVGEHMLPHLFAHYYNSVQEGVVDDRWNKLWCDFTSKEYKHGVAS
                     RDKKWEMCRGMGLSFGYNQVEDESHLISVKDLISLLVETVADNGNLLLNIGPKADGTI
                     PQEQVERLLALGSWLEINGEGIYKSRCSQHQTEQIGDVTYRYTKVGADLYLYIDGLTE
                     AQISLPLSVYGELQALNTELKFTIENTAQGRVLHIQNYQPDWYVLGFKIADGEK"
     gene            complement(4214..6130)
                     /gene="iolC"
                     /locus_tag="PXD18_001026"
     CDS             complement(4214..6130)
                     /gene="iolC"
                     /locus_tag="PXD18_001026"
                     /EC_number="2.7.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-2-deoxygluconokinase"
                     /protein_id="HDL6301471.1"
                     /translation="MATVNHQDRPLDLICLGRVAVDFYGQQIGSRLEEMTTFSKYLGG
                     SSGNVAYGTAVQGLRSSMLARVGDEHMGRFLREELQSVGVDTSHLITDKERLTALVIL
                     GIKDKETFPLIFYRDNCADMAITKDDFSEAYIASSRCLAITGTHLSNPKTREAVLTAL
                     EYAGRNEVKRALDIDYRPVLWGLTSLGDGETRYIDSAEVTKSLQEVLHHFDLIVGTEE
                     EFHIAGGSTDTLTALKNVRKVSNAVLVCKRGALGCSVFEGELPNDLDGGLNVYGVRVE
                     VLNVLGAGDAFMSGLLRGYLNNEGWEQACHYANACGALVVSRHGCSPAMPTKRELDDY
                     LTRAESVPRPDLDERLNHLHRVTTRKKQWENLCIFAFDHRKQLVDMANKVGADLARIP
                     KLKQLLLKAMEQTATQSGLPQNQAGILADTTFGQDVLNEITGKDYWIARPIEEPSSRP
                     LELEYGDLGSQLASFPRDHVIKCLAFYHPNDESGLKARQDRKLKEVYQACCRTGHELL
                     LEIILPADMPQSEAFYNQAIAHFYQLGIKPEWWKLPDVSRAQWQAISATIEANDPDCR
                     GILILGLDAPLEVFKDTFEQAKGCEKVKGFAVGRTIFGEPSEKWLAGELDDNTLISAV
                     SEKYRTLIDLWQQR"
     gene            6398..8332
                     /gene="iolD"
                     /locus_tag="PXD18_001027"
     CDS             6398..8332
                     /gene="iolD"
                     /locus_tag="PXD18_001027"
                     /EC_number="3.7.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3D-(3,5/4)-trihydroxycyclohexane-1,2-dione
                     acylhydrolase (decyclizing)"
                     /protein_id="HDL6301472.1"
                     /translation="MQTTRLTVAQALVQFLDNQYLDVDGKEIKFVHGVAAIFGHGNVL
                     GIGQALAQNAGGLTLYQGRNEQGMAHLAMGFAKQNLRQRIIACTSSVGPGAANMVTAA
                     ATATANRIPLLLLPGDVFATRQPDPVLQQIEQPYDLSISTNDAFRAVSKYWDRVQRPE
                     QLMSACINAFRVLTDPAETGAVTIALPQDVQAESFDFPNSFLQKRVHRLERTPPTTAM
                     IKQAVTLIQTKKKPLIVCGGGVRYSQAGQILQKFAKQFGIPFAETQAGKSAVVSDHAL
                     NVGGVGETGCLAANRLAKEADLVIGIGTRYTDFTTSSKWIFQNPNVQFLNINVARFDA
                     YKLDGVQLVADAKTALEALSQAIPTDYQAQWENEISQAKADFADEIQRLRAVQYHPDF
                     TPEINDNLDHKAVHNEFIQLTGSQLTQTQVLGIVNETIDNNAIIVAAAGSLPGDLQRT
                     WLSKGEETYHLEYGYSCMGYEVSAAVGVKIARPEQEVYALLGDGSYLMAHTELVTSIQ
                     EGKKINVVLFDNMANGCINNLQIGNGMDSFGTEFRFRNGETNQLNGGLVPIDFAKNAE
                     AYGCKTYRVTNEAELRAALDDAKKQTVSTLIDIKVLPKTMAHGYGCWWHVGVAEVSES
                     ERIQQARQRSEEQLAKARKY"
     gene            8459..9355
                     /gene="iolE"
                     /locus_tag="PXD18_001028"
     CDS             8459..9355
                     /gene="iolE"
                     /locus_tag="PXD18_001028"
                     /EC_number="4.2.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011817366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="myo-inosose-2 dehydratase"
                     /protein_id="HDL6301473.1"
                     /translation="MKAENIQLGIAPIGWTNDDLPELGAENTFEQCVSEMALAGYTGC
                     EVGNKYPRDVAVLKHKLDVRGIQICNAWFSTFFVDGKREETIAEFIKHRDFLHAMGAK
                     VIGCSEQSRSIQGTTKSVFKEKPIFNDEDWKRMAEGYNELAKLAAEKGMKVCLHHHMG
                     TGIQTPEEVDRYMAEVNDDVYLLFDSGHLYYSEGCQKAMLGVLEKYIDRIIHVHLKDV
                     RDEVMAEVKAKDLSFLEGVKKGTFTVPGDGVIDFRPIFDILEKHDYKGWMVVEAEQDP
                     ALANPFEYALKGRKYIRETAGV"
     gene            9357..10367
                     /gene="iolG"
                     /locus_tag="PXD18_001029"
     CDS             9357..10367
                     /gene="iolG"
                     /locus_tag="PXD18_001029"
                     /EC_number="1.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005537901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol 2-dehydrogenase"
                     /protein_id="HDL6301474.1"
                     /translation="MLKVGIIGAGRIGRVHSESISKYVKGAEIKAISDVKITEELTAW
                     AKSMGIPEVYDDYKKILQDPEIDAVLVCSSTNTHAPISIEAAQAGKHVFCEKPVDADP
                     AKIREVLSAVEKAGVKFQVGFNRRFDHNFKAIKDRVAAGDIGEPHVIRVTSRDPEAPP
                     IEYVKVSGGMFFDMTIHDFDMIRYLSGSEVEEVFAVGTVLVNPEIGKAGDIDTAVITL
                     KLKNGAIGVIDNSRKAAYGYDQRAEVFGSKGAIHITNDTGSTAVFSGENGVVAEKPKY
                     FFLERYMQSFADEISCFVDSVVNDKPTLVNGNDGLQPVLIALAAKKSLEENRPVKLSE
                     VA"
     gene            complement(10746..11168)
                     /locus_tag="PXD18_001030"
     CDS             complement(10746..11168)
                     /locus_tag="PXD18_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301475.1"
                     /translation="MSSIKEIFSTKNSPINVLMQTEWFLGFILIVVYLDAYFQLVHQV
                     PIYIAIQQKEIYLTKTIDYIAAIFFFSVTFTALFTMMRLLHIFILSDLLDKIGCNTYE
                     LPKIEDIHKYEMLSILKIQAAKENNAELRYYVKKKKKK"
     gene            complement(11238..12371)
                     /locus_tag="PXD18_001031"
     CDS             complement(11238..12371)
                     /locus_tag="PXD18_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDL6301476.1"
                     /translation="MKTIKIGLVGTGYIGRCHAIAYAQAPTLFPLKGKIQLEYLAEIN
                     QALADQKAREFGFQRATDDWRKLVTDPNVDVVDICTPNFLHKEIALEAIKHGKHVYSE
                     KPLALTAQDAKEMVIAAQQAGVKTLVGFNYIKNPTTQLARQIIQNGEIGEVVHFYGTH
                     NEDYLANPNTPIDWHCYKAKAGLGTLGDLAAHIVSIAHYLVGSDIERVIGDMQTVIEE
                     RPSPHNPAEKIKVENEDQASSLIRFANGVMGTLESSRISCGRKMGLTYVVTGTKGTLS
                     YTQERMAELKLYLHDDDKSRQGFKTILVGPEHPDYAAFCVSAGHGIGFNDQKAVEIRD
                     LINGIAADDPMYPDFEEGYKISRVLEAIAKSAEEKRWVEVSEI"
     gene            complement(12502..13530)
                     /locus_tag="PXD18_001032"
     CDS             complement(12502..13530)
                     /locus_tag="PXD18_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6301477.1"
                     /translation="MTTQFLKNMGMVDDKGKIDFIAFFERFGVLIFLILLIIFFTSQN
                     GAFLSQRNIYNVLTEVSIFGIMAVGMTFVILTAGIDLSVGSILAVTAMFAAYIIKGDN
                     TVTLEAGAWGGMSWLIGLSICLGLGTFIGWLHGLGVTKLKLPPFIITLGGMTIWRGLT
                     LVLNNGSPIAGFDEGYRWWGRGDILGVPVPVVIFAVVAIIGYFALHKTRWGRYVYSVG
                     GNPEAARLAGVNINRTLVSVYVVIGALAGLAGFILSARLGSAESVAGVSFELRVIASV
                     VIGGTSLMGGYGRVTGTIIGSIIMGVLINGLVLMDVSAYYQQIIMGLIIILAVAFDTY
                     AKSRRGAL"
     gene            complement(13542..15086)
                     /locus_tag="PXD18_001033"
     CDS             complement(13542..15086)
                     /locus_tag="PXD18_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL6301478.1"
                     /translation="MSTPLLEVKDLTKSFSGVMALNGVKLTVGKGEVHALLGENGAGK
                     STLLKALSGAQPQTSGEIIFNGETLSLSDSPFDRQLKGIVTIYQEFNLLPNMTVAENF
                     FLGREPVKGLFVNEKAVNEEAQLVLDNLGLNIKPDTQVSRLSVAQQQMVEIARAMTLN
                     AKLIIMDEPSAALSDKEVETLHQIVRDLKSRGISVIYVTHRLNEVFALCDRFTVFQDG
                     RYSGEGEVKNVNVDQIIKMMVGREVAFTRRPPEETHHTHRPIRLAVKNLHREKPAFDP
                     HGIALHGVSFNIHEGEVLGIAGLVGAGRTEIARCLFGVENYTADEISLDGKPYAATSP
                     LDALEKGVALVPEDRKKEGLVLGLPIKTNMTLPILSKLLKGNLFVDNQKEDDLIETYR
                     QALRIKMASSELEARKLSGGNQQKVILARCMALNPKVLIVDEPTRGIDVGAKSEVHQV
                     LFDMAKQGVAVLVISSDLPEIMAISDRIITLSEGRVTGEIHGDDATEEKLMSMMAVGV
                     QRKAAA"
     gene            complement(15137..16075)
                     /locus_tag="PXD18_001034"
     CDS             complement(15137..16075)
                     /locus_tag="PXD18_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HDL6301479.1"
                     /translation="MKKRIKFVLSALTLGLAMNSFAKDELVVFSLPNLSSPFEVQLQK
                     VAVETSKKLEIKLQVLDGQSSSTKQASDLENAITRGAKGIIISPNDVNAISGAVEEII
                     KEKIPAATLDRKVESSKPVPHFGANNYTGGQEVAKAVKAKYPNGAKIILLTGQPGSTS
                     NIERTKGIRDELAAGGDKYKIVVDQTGNWLRSEGLRIIESVLPTLKEKPEVIISANDD
                     MALGAIEALRSQGLKAGDILVTGFDSTPEALARVKDGWLYLTADQRPSFAVSTALEQV
                     VGNIRESKEVSGADYPPKIILKDNLQEAERFAEISE"
     gene            complement(16407..17918)
                     /locus_tag="PXD18_001035"
     CDS             complement(16407..17918)
                     /locus_tag="PXD18_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HDL6301480.1"
                     /translation="MSQFVQNFINGAVVESQSQRVTSVFNPATGEETKKVKLSLPNEV
                     DAAIAAADQAFKSWSQQSPLRRARILFKFKELLEANFDELARLISSEHGKIYSDAIGE
                     LTRGLEVVEFATGIPHLQKGEFSANAGRGIDIHSIQQPLGVVAGITPFNFPAMVPMWM
                     FPVALACGNTFVLKPSEKDPSVSIRLAELLKEAGLPDGVFNVVQGDKEAVDILLTDSR
                     IQAVSFVGSTAIAQYIYEKGSANGKRVQALGGAKNHALIMPDADVQGTINALLGAAFG
                     AAGERCMALSVAVVVGDELADKIIEELIPKVKALKIGSGLLPQGVLENDMGPVISKEH
                     KAKIESYIDQGVAQGAKLCVDGRGYKVEGFENGYFVGGTLFDNVTPEMTIWQDEIFGP
                     VLSVVRVKDYAEGIALINSHQYGNGSAIFTADGDSARQFTQDVQAGMVGVNIPIPVPM
                     AFHCFGGWKASIFGPLNVYGTDGVRFYTRMKTITTRWPDSSVRSQAAFNFPTL"
     gene            18137..18961
                     /gene="iolB"
                     /locus_tag="PXD18_001036"
     CDS             18137..18961
                     /gene="iolB"
                     /locus_tag="PXD18_001036"
                     /EC_number="5.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-deoxy-glucuronate isomerase"
                     /protein_id="HDL6301481.1"
                     /translation="MSSPLLSKPNFNQHEGLIQHITPENAQWEYVGFDVYQLSKQQIT
                     LESGENELCLVFVTGFGSVYVDDYAFENIGNRTTPFEKIPPYAVYIPPHKSVLVKTEL
                     NLELAVCKAPSQGNYPVRLISPNHIGVEKRGFGNNQRLVHNILPETEAADSLLVVEVF
                     TDEGNTSSYPSHKHDDKHSTEETYLEETYYHRFDPPQGFAMQRVYTDDRTLDECMAVY
                     DKNVVKVPRGYHPVATIAGYNNYYLNVMAGPVRKWKFTWEQDHLWVNSETYKAKFE"
     gene            complement(19037..20488)
                     /locus_tag="PXD18_001037"
     CDS             complement(19037..20488)
                     /locus_tag="PXD18_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HDL6301482.1"
                     /translation="MPNHKFLLLRFQAYINGKFVSSQNGKTFTVQNPTNGEKIGEVAD
                     LGTEETAQAIEAAAVAQKKWQALLPKERSVILRKWFELIMQNQEELAQILSLEQGKPL
                     AESRGEIAYGASFIEWFAEESKRIYGDVLPQDKAGRRLFVTKQPIGVVAAITPWNFPN
                     AMITRKAAPALAAGCAIVIKPAAETPLSALALAQLADQAGIPKGVFNIITSSDVEGVG
                     RELSTNPTVRKLTFTGSTRVGKILMQQSAGTVKKLALELGGNAPAIVFDDADLDTAVE
                     GVFASKFRNGGQTCVCANRIYVQAGIYEQFLAKLSEKVAQIKLGSPFEEEVTIGALIS
                     ERAVEKVESHINDALSLGAELVLGGERHALGGTFFQPTILKNVTQAMKVAREETFAPL
                     APIFKFETEEEVIQWANDTEFGLAAYLFSQNIGRIWRVSEQLEYGIVGINEGIISNEI
                     APFGGWKESGLGREGSKYGIEEFLEIKYLCMKV"
     gene            complement(20666..21976)
                     /locus_tag="PXD18_001038"
     CDS             complement(20666..21976)
                     /locus_tag="PXD18_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDL6301483.1"
                     /translation="MIYAEIFVVLAAIYLGLRSGGLGIGLYGGLGLAILTLGFGLPMG
                     SIPVDVMLIIMTVVIGAAVLQAVGGMDLLVRYAEVLMRKNPKYINFIAPMITWLMTIM
                     AGTGFIVFSTLPVIAEVAKESGIRPSRALAGSVVSSQLAIAGSPLSAAMAAMIAVMEN
                     NSVTFFQVIAVCLPVSFIASMVAAFVASKQGCELQNDVVYLERLKAGIVSPSRKLASE
                     STYSKGAKLSIGIFLLATVLVVLLAAVPGLKPVYENGKSMSTRDIIIVMMLASSCLMM
                     LVGKIKPDTIVASPIFRSGMTSIAVIIGIVTLGMTFVDAHLIEIKASIGNILTEYPML
                     LAVVLFFTCALLYSQGSTSALIIPLAVSLGIPNWAILASFIAITGIFILPTYPTSLAA
                     MELDTTGSTRAGKYIIDHPFMLPALVGVAVGLAFGFVWAPMIVS"
     gene            complement(21992..22687)
                     /locus_tag="PXD18_001039"
     CDS             complement(21992..22687)
                     /locus_tag="PXD18_001039"
                     /EC_number="5.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HDL6301484.1"
                     /translation="MARNIIGILGGMGPAATADMFQKFIRLTPADCDQAHIPLLISSI
                     PDIPDRTRYILANGENPAPVMEKYIEGLESAGATCIIIACNTAHYWFEHLKAKSQVEM
                     LSMIDCVVDEVLKCGKWRVGLLATDATLAVDLYKKQLEAQGLTFICPTENGQKAVMDS
                     IYLLKSGELEKATELMLQQRDELIRLGAEVIILGCTEVPIILAQEIEREPMRYVDSTL
                     VLVKKAIDWYQTH"
BASE COUNT         6548 a         5149 c         4749 g         6346 t
ORIGIN      
        1 ataaatctat cattctagaa attattaatg ctttaggaaa caaagagaat atcaagcaag
       61 ttgaagcttg tttaacccgt ttacgtgtgg tgttacataa caacggttta ttaaataagt
      121 cggcactgaa aaagcttggg gcggttgatg tcattaaagt cggtgatacg caacaaatta
      181 tttttggtgc aaaagccggg cagtatcgtg atgaaattaa cgctttaatc ggttaataga
      241 caaagacctg tatttacgca ggtctttcac tttcttaatc taggcttttt tcaacgccag
      301 tgaaacggca atcgtttgtg cgagcgtcat tgtggcacac tgggatcgaa aaccactcac
      361 ctgtgcttct ttaataataa acgacacatc gctaaatgaa aggagtgggc taagttggct
      421 atcagtgatc gcaatatgtt ttacccccgg tctggcagtt gctgtcacca cgttgagtgt
      481 ttcattcgca tacggggaaa agctcacggc aatcaccgca tcaccttcac ggattcggct
      541 taattgctcg tcaaacatac cgcccgaacc atcgatcata aagacatcat agtccaaatg
      601 gtgcaacgca tagtttaggt agttcgcaat gctgaatgag cgttttaaac ccacaataaa
      661 aatgcgtttg gcattgtgta aaatatctac cgtttgtgct aactgctctt cgctgacttg
      721 tgtcgataac tgttgcagtg cctgcgtatt accctgtacg aacacatcta aaatatgatt
      781 gagctcactg ttttgctcat caagcggttc aatttgacga aaaagttgca cacgttcggt
      841 gtaacgtgat gtgccttcca tcatatcttg gcgataaagc tgtttaattt cattaaaacc
      901 gctaaatcca aacgcattcg caaaacggat taaggttgaa gggggaacat cagctcgttc
      961 agcaatggta gaaaccgtat caaacaccac gctgttgcca ttatccagca catactgtgc
     1021 cacttgtttt aaacgtttac ttagtccgtc atactctttt cggatttgtt cttgaaaatg
     1081 tgctaattga gtaggtccat tcatttcaaa ttatctctgc ttgaattttt tatttcatta
     1141 tacgcttttc ttgtttacaa gcggataaat tttgtcaatt ttttgcaaaa ataagggcta
     1201 atctttcgat tagcccctct caattacgct agaaataagt gttattgtgc tgccattcgt
     1261 gctttttcta gcaactcctg ttgtgctttt tcatctagat tttgtgcttt ttctttctcg
     1321 acgcagactt tttcatacat tttgaagaat ggatagtaga tcacaatatc caaaataatc
     1381 agtgcaatac ttaaaattgg tgcccaaata tcaccggcag aaaccagata tgccccaatc
     1441 ggtgccggtg ttgtccacgg tgccatcaag taaacacggt gaataaggtt aaaatctaaa
     1501 atcaggtagg caataaccgc attcgctagt ggtgcgaaaa tcagcgggat aaagaacagc
     1561 ggattaacca ccattggcac accatacaca attggttcac cgatagagaa gaaggacgga
     1621 accaagccga ttttaccgat agagcgtaag tgtgccgatt tactgcgtac cagcaggaat
     1681 gccaaggcta ttacaccacc acttgccccg tgtacgatat agaaatccca gaaggaattg
     1741 gtgatgataa aggggagcgg ttcaccagct tggaatgctg ctaagtttgc cgccatattt
     1801 tgcagtagga atggtgtcca aagttgcatt agtaccaatg agccgttaat gcctaagaac
     1861 cagagcaaat gggtagcaat aacgaacaag caaattgccc ctagcgagtc actcacagca
     1921 atcaatggcg ccataaagtc cataattagt tgtggaatat tacgacctgt ggcactttcc
     1981 acccaaatgg caaacggata gagagtcagt aaaatcgcta aaattggaat cacgatattc
     2041 agagattctg ctacagcgtg cggcacttct ttcggtaagc ggattttaat ttttaagaac
     2101 tccaacaagc gggtcatttc taccgaataa atggcaataa aaatcgcaga gaatagccca
     2161 ataccgccaa agaatttaat atccatcatt ccgtctttga ccggtgcagc cactaacaaa
     2221 aatgccatta ccgagagaaa tgccgctggc aggggctctc ttttataggc tttggcaagg
     2281 ttgtaggcga tactggcaga ggtaaataat gaaatcgcat taaacgacat ttggaagaaa
     2341 ttccaaccgt aagggcttgc ccaattcgca aaacgccacc aagcttgccc gaaagcattt
     2401 tgggtatttt catcaaatgg cggaattagc aaaatcataa taaagctgcc gacaattaag
     2461 aatggtaaca ctacaataaa accgtctcga atagcggaaa tatgcggttg attttccatt
     2521 cgacgtgcta ctggagcaac gtgggcattc ataaagtcaa taaaacgttg tgaaacggac
     2581 atacctattt ctccccatct gcaattttaa agcctaatac ataccaatcc ggctggtagt
     2641 tttgaatatg taacactctg ccttgtgcgg tgttttcaat ggtaaatttc agctcggtat
     2701 tgagtgcttg tagctcacca taaactgaca gtggcaagct gatttgggct tcggttaagc
     2761 catcaatgta aagatagaga tccgccccaa ctttggtata acgataggtt acatcaccga
     2821 tttgctcggt ttggtgttgg ctacaacggg atttatagat tccctctcca tttatttcca
     2881 gccagctccc cagtgctaat aagcgttcaa cttgctcttg cggaatagtg ccatctgctt
     2941 tcgggccgat attcagcaat aaattgccgt tgtcggctac ggtttctacc aatagggaaa
     3001 tcaagtcttt caccgaaatc aaatggcttt cgtcttctac ctggttatag ccgaacgata
     3061 agcccatacc acggcacatt tcccatttct tatcacggga agccacgccg tgtttgtatt
     3121 ctttggaggt gaaatcgcac catagtttgt tccagcggtc gtccactacg ccctcttgaa
     3181 cgctgttgta ataatgagca aataggtgtg gtaacatatg ctcgcccact tttggccagc
     3241 caatatcatt ccacaataca tctggtttat agcggtcgat cagctctacc acttgtttat
     3301 aggcgtagtc agcgtattcg taagtcgggc aagcgtttga gaagttttga ctttcggtga
     3361 aaatcggggc agaggaataa gtccaatcga taatgcccga gtagtaagcg cccattttta
     3421 agccttgctc ccgcacattt tcagtcagct cgcccattaa atcccgcttc ggtccggctt
     3481 gcatacagtt gaaatcggta tatttacttg gatagagaca gaaaccatcg tgatgtttgg
     3541 tggttaatac cacatatttg gcgccagctt tggcaaacag tttcgcccat tctgctggtt
     3601 gccatttttc cgctttccat agtggcagga agtcgttata ggcaaaggat tcgccataag
     3661 ttttgatatg atgttcgtag gtcgggcctt ttttgacatt gatggaatta aaataccatt
     3721 ctgcataagg gttattacag aaccactgtt catcaatatc aatttcacct aactgacagg
     3781 tcggtggggc aaaggcgggt acggagtaaa tcccccagtg aataaaaatc ccaaacttag
     3841 catcttcata ccactctggt acttggtgct gtttgatcga ctcccaactg gcgtggaaac
     3901 gttttggtga agtgttgcaa ctcatacaca gactcctatt gaatctaaat agaactaaac
     3961 tgaaatacat tttccatttt gataaaaata aaacaatttg tttcgataaa aagggggggg
     4021 tttatgtatg aaatgtgaac ttcatcacac ttattttgtg ataagcagat tgaggaatgc
     4081 ccgatattcg cttttttagg aaaattcggg catttttacg gctagcaagc ggtctgttta
     4141 gccggatttt ttgcaaaaca aaaccccttg cttaatatca taagctaagg ggttttcact
     4201 taaagcaata tgattaacgt tgttgccaga gatcgattaa agtgcgatat ttctccgata
     4261 ccgcagaaat caaggtattg tcgtccaatt caccggcaag ccatttttcg gacggttcac
     4321 cgaaaatggt gcggccgact gcaaagcctt tcactttctc acagcctttt gcctgttcaa
     4381 aggtgtcttt aaacacctct aacggggcat ctaaacctaa aattaaaata ccacgacagt
     4441 ccggatcgtt tgcctcaatg gtggcggaaa tcgcttgcca ttgtgcgcga gaaacatccg
     4501 gcaatttcca ccattccggc ttaatgccaa gttggtagaa atgtgctatc gcttggttat
     4561 agaaagcctc actctgtggc atatcagcag gcagaataat ttccaacaat agctcgtgac
     4621 cggtacggca acaggcttga tacacctctt ttaacttgcg atcttggcgg gcttttaaac
     4681 cgctttcatc attcgggtgg taaaatgcca agcatttgat gacgtgatcg cgtgggaatg
     4741 atgctagctg agagcctaaa tctccatact ctaattccag cgggcgggaa gacggctctt
     4801 caatcgggcg ggcaatccag taatctttgc cggtaatctc attaagtaca tcttgcccga
     4861 aagtggtatc ggctaggatc cctgcttgat tttgtggtaa gccggattga gttgcggttt
     4921 gttccatcgc ttttaatagc agctgtttca gtttcggtat gcgagcaaga tctgcaccga
     4981 ctttatttgc catatccacc aactgtttgc ggtgatcaaa agcaaaaata cagagatttt
     5041 cccactgttt tttgcgggtg gtgacacggt gtaagtggtt taaacgctca tctaaatccg
     5101 gacgtggtac actctctgca cgggttaaat aatcgtcaag ttcacgtttg gtcggcattg
     5161 ccggtgaaca gccgtgacga gataccacta acgctccgca cgcattggca tagtggcacg
     5221 cttgttccca accttcgtta tttaagtagc cacgcagtaa gcccgacata aaagcatcgc
     5281 ctgcacccag cacattcagc acttctacac gcacgccgta cacattcaag ccaccgtcta
     5341 aatcattcgg cagctcgcct tcaaatactg aacaccctaa tgccccacgt ttgcacacta
     5401 atacggcatt agagacttta cgcacatttt tgagtgcagt gagagtatcg gtcgaaccgc
     5461 ctgcgatatg aaattcttcc tctgtgccga caatcagatc gaaatggtgc aatacttctt
     5521 gtagcgattt ggtgacttcg gcactgtcta tataacgggt ttcgccatca ccgagtgagg
     5581 ttaatcccca taacacaggg cgataatcaa tatctaacgc tcgttttacc tcatttctac
     5641 ccgcatattc gagtgcggtc agcacagctt cacgggtttt agggtttgac aggtgcgtgc
     5701 cggtaattgc taagcaacgg ctggaagcaa tataggcttc gctaaaatcg tctttggtga
     5761 ttgccatatc cgcacagtta tcacgataga aaatcagcgg aaaagtctct ttatctttaa
     5821 tgccgagaat aaccagtgca gttaagcgtt ctttatcggt aattaaatgg ctggtgtcca
     5881 cgcctacgct ttgtagctct tcacgtagaa aacgccccat atgttcgtca ccgacccttg
     5941 ccagcattga agaacgtaaa ccttgcaccg ccgtaccgta agccacattg cctgacgagc
     6001 cgccgaggta ttttgaaaat gtggtcatct cttccaaacg ggaaccgatt tgttgcccat
     6061 aaaagtccac cgccacacgc cctaaacaga taagatccaa tggacgatct tgatgattaa
     6121 ctgttgccat aaccgctcct tacaacaagt aaatttgaat acacactata catcatacaa
     6181 aaatgaaatt tttatttcaa atttattcta tttaaattat catttctgtg atctagctct
     6241 cactttgaaa aataaggcaa taacttcgca gaaatgagaa ctggatcaca tctttttttc
     6301 gatttccttg ctattataaa tgaaataaat ttttcatttg taaaaatcag tagaaaaccg
     6361 accgcttgca aaagcgatgt aagccagagg aggctttatg cagactactc gtttaacggt
     6421 tgcacaggcg ttagtgcaat ttttggataa tcaatattta gacgtggacg gcaaagagat
     6481 taaattcgtt cacggtgttg ccgctatttt cggccacggc aatgtgctgg gaataggtca
     6541 ggcgcttgct caaaatgccg gtggtttaac gctctaccaa ggcagaaatg agcaaggtat
     6601 ggcacatttg gcgatgggct ttgctaagca aaatctgcgt caaagaatta ttgcctgtac
     6661 ttcctcggtc gggccggggg cggcaaatat ggttacggct gcggcaacgg caacagcgaa
     6721 ccgtattcct cttcttttat taccgggcga tgtgtttgcg acccgccagc cggatccggt
     6781 actgcaacaa atcgaacaac cttacgattt aagcattagc actaacgatg cgttccgtgc
     6841 cgtcagtaaa tattgggata gagtgcaacg ccctgagcag ttaatgagtg cttgtatcaa
     6901 tgcgtttcgt gtgctgaccg accctgctga aaccggtgct gtcaccattg ctctgccgca
     6961 agatgtacaa gcggagagtt ttgatttccc gaacagcttc ctgcaaaaac gagtgcatcg
     7021 cttagagcgt acaccgccga caacagcgat gattaagcaa gcggtaacat taattcaaac
     7081 caagaaaaaa ccgctgattg tctgcggtgg cggtgttcgc tactcgcaag cgggtcaaat
     7141 tctgcaaaaa tttgctaaac agttcggcat tccatttgct gaaacccaag cgggtaaaag
     7201 tgcggtggtg tccgatcacg cattgaatgt aggcggagtg ggagaaaccg gttgtttagc
     7261 ggcaaaccgt ctggcaaaag aagcggattt agtgattggc attggtacac gctacaccga
     7321 cttcacgact tcttccaaat ggattttcca aaacccaaac gtgcagtttt tgaacattaa
     7381 tgtggcacgt tttgatgcgt acaaattaga cggcgtgcaa ctggttgccg atgcaaaaac
     7441 tgcattagag gcgttaagcc aagccattcc tactgattat caagctcaat gggagaatga
     7501 aatttcacag gcgaaagcgg attttgctga tgaaattcaa cgcctgcgcg ctgtgcaata
     7561 tcaccctgat ttcacccctg aaattaacga taatcttgat cataaagcgg ttcacaatga
     7621 atttattcag ctcaccggtt cccagctcac ccaaacccaa gtgctgggta ttgtgaatga
     7681 aaccattgat aacaatgcga ttattgttgc cgccgccgga agtttgccgg gtgatttaca
     7741 acgcacttgg ttaagtaaag gtgaagagac ttaccacctt gaatatggct actcctgtat
     7801 gggctatgaa gtgagtgcgg cagtcggcgt gaaaattgcc cgccccgaac aagaggtcta
     7861 tgccttgctg ggggacggct cttacttaat ggcacacacc gaattagtga cctcaattca
     7921 agagggcaaa aaaatcaacg tggtgctgtt cgacaatatg gcaaacggct gtatcaacaa
     7981 cctgcaaatc ggcaacggta tggacagttt cggtacggaa ttccgcttcc gcaatggcga
     8041 aactaaccaa ctcaacggcg gtttagtgcc gattgatttt gccaaaaacg ccgaagcata
     8101 cggctgcaaa acctatcggg taactaacga agccgaattg cgtgccgccc ttgatgatgc
     8161 gaaaaaacag accgtttcta ccttaatcga tattaaagtg ttgccgaaaa caatggctca
     8221 cggctatggc tgctggtggc acgttggtgt cgcggaagtg tcagagagcg agcgtattca
     8281 acaagcccgc caacgctccg aagagcagtt agctaaggct cggaagtatt agttaaaaaa
     8341 acaactcccc actttgagct acgaggggag aatatcaagc ggtcaaattt gcaaaatttt
     8401 tgataaaaat aaccgcttgc atccaaattt atctctataa atcaaacgag gtttctctat
     8461 gaaagctgaa aacattcaat taggcattgc cccaatcggt tggacgaacg atgacctgcc
     8521 ggaactggga gcggaaaaca ctttcgagca gtgtgtgagt gagatggcac ttgccggcta
     8581 cacgggctgt gaagtgggta ataaatatcc gcgtgatgtt gccgtgttaa aacacaaact
     8641 ggacgtgcgt ggcattcaaa tctgtaatgc gtggttcagc accttctttg tggacggtaa
     8701 acgggaagag accattgccg agttcatcaa acatcgtgat ttcttgcatg caatgggggc
     8761 aaaagtgatc ggctgttccg aacagagccg tagtattcaa ggcacaacca aatctgtgtt
     8821 caaagaaaaa ccgattttca acgatgaaga ttggaaacgt atggcagaag gctataacga
     8881 attggcgaaa cttgccgccg aaaaaggaat gaaagtctgc ctgcatcacc atatgggaac
     8941 cggtattcaa acacccgaag aggtcgatcg ctatatggca gaagtgaatg acgatgtcta
     9001 tctgttgttc gattcagggc atttgtacta ttccgaaggc tgccaaaaag cgatgctcgg
     9061 cgtactggaa aaatatatcg accgtattat ccacgttcac ttaaaagatg tgcgtgatga
     9121 agtcatggcg gaagtaaaag caaaagattt aagcttttta gaaggcgtga aaaaaggcac
     9181 ctttactgta ccgggcgatg gtgtcattga tttccgtccg attttcgata ttttagaaaa
     9241 acacgactac aaaggctgga tggttgtaga agccgaacaa gatccggcac ttgccaaccc
     9301 gtttgaatac gccctcaaag gcagaaaata tatccgtgaa accgcaggag tttaatatgt
     9361 taaaagtagg tattattggt gcaggccgta ttggacgtgt gcattctgaa agtattagca
     9421 aatatgtcaa aggtgctgaa atcaaagcaa tctctgatgt aaaaattacc gaagaattga
     9481 ccgcttgggc aaaatcgatg ggtattccgg aagtttatga tgactataaa aaaatcctgc
     9541 aagatccgga aattgatgct gtattggtct gctcttccac caacactcac gctccgattt
     9601 cgattgaggc agcacaggct ggcaaacacg ttttctgtga aaaaccggta gatgcagacc
     9661 cagctaaaat ccgtgaagta ttgagtgcag tcgaaaaagc cggtgtaaaa ttccaagtgg
     9721 gctttaaccg ccgcttcgac cacaacttca aggcgattaa agaccgtgtg gcggcaggcg
     9781 acatcggcga accgcacgtt atccgagtaa cctctcgtga tccggaagcc ccgccaatcg
     9841 aatatgtgaa agtctccggc ggaatgttct ttgatatgac cattcacgac ttcgatatga
     9901 ttcgttattt atccggcagc gaagtggaag aagtgtttgc agtcggcacc gtattagtaa
     9961 accctgaaat cggcaaagcg ggcgatattg atactgccgt tatcacgttg aaactgaaaa
    10021 acggagcaat cggcgtaatc gacaacagtc gcaaagctgc ctacggctac gaccaacgtg
    10081 cggaagtgtt cggctcgaaa ggggcaatcc atatcactaa tgataccggc tcaactgccg
    10141 tattctcagg tgaaaacggc gtggtggcgg aaaaaccaaa atacttcttc ttagaacgtt
    10201 atatgcaatc tttcgccgat gaaatcagct gtttcgtaga ttctgtggta aacgacaaac
    10261 caacgttagt aaacggcaat gacggcttac aaccggtact tattgcctta gctgcgaaaa
    10321 aatcactgga agaaaaccga ccagtgaaat tgagtgaagt ggcgtaattg atcataaata
    10381 caagcggtcg gttttactcg ctacactcgc acttcgtgcc atcggcatag ccgatgttca
    10441 aacgcaagca ttttgcagaa aaatttgtaa aactgaccgt ttgagttttt atttattatc
    10501 ttttgggaaa taaatataat cgtgctcaat ttttattgat tgtttaaata aatagaaggc
    10561 tggaattatc aaaagagtta atacaatacc aataaaatat ttaaaatttt ctgtttgcat
    10621 tccaatatat tcaaaagtga atctaatccc aagagggtaa ttcccccatt cttttgccaa
    10681 acagatatga ataatcaaaa agaagataat acctaaaaaa cgtcgagata ttgatattct
    10741 gactctcatt ttttcttctt ctttttcaca tagtatctca actctgcatt attttcctta
    10801 gctgcttgta tttttaatat tgaaagcatt tcgtatttgt gtatatcttc aattttaggc
    10861 agctcataag tgttacatcc tattttatca agaaggtctg ataaaataaa aatatgtaat
    10921 aaacgcatca ttgtaaataa tgcagtaaat gtaactgaaa aaaagaaaat tgctgcaata
    10981 taatcaatgg tttttgtgag atatatttcc ttttgctgta tcgcaatata gataggcact
    11041 tgatgaacaa gttggaagta agcatccaaa taaacaacta tcaatatgaa gcctaaaaac
    11101 cattctgttt gcataagaac attgataggg ctgttttttg tgctaaaaat ttctttaatt
    11161 gaactcataa tttttcctta aatgtaaaaa aacgtacctc aaccaatttg agatacgttt
    11221 ctattttaat gtaattatta aatctcactc acctccaccc accttttctc ctccgccgat
    11281 tttgctatcg cttccaatac tctggagatt ttatagcctt cttcaaaatc gggatacatc
    11341 gggtcatcag cggcgatgcc gttgatgagg tcacggattt ccaccgcttt ttggtcgtta
    11401 aaaccgatgc cgtgaccggc actcacacaa aaagcagcgt agtcgggatg ttccgggccg
    11461 actaaaatgg ttttgaatcc ttggcgggat ttatcgtcat cgtgcaaata gagtttgagt
    11521 tctgccattc gttcttgggt atagctgagc gtgcctttag tacctgtaac gacataggtc
    11581 agccccattt tacgcccgca ggaaatgcgg gagctttcga gcgtgcccat taccccatta
    11641 gcaaatcgta tgagactact tgcctgatct tcgttttcta ctttgatttt ttctgctgga
    11701 ttgtgcggac tagggcgttc ttcaatcact gtttgcatat cgccgataac acgctcaatg
    11761 tctgaaccaa ccaaatagtg tgcgatactg acaatatgtg cggctaaatc tcccaacgta
    11821 ccaagcccgg ctttggcttt gtagcagtgc caatcaatcg gggtattagg gttggcgaga
    11881 taatcttcgt tatgcgtgcc gtagaaatgc accacctcac caatttcgcc gttttgaata
    11941 atttggcgag ccagttgggt ggttggattt ttgatatagt tgaaaccgac caaggtttta
    12001 actcccgctt gttgagcggc aatcaccatt tctttggcat cttgggcggt gagtgcaagc
    12061 ggtttttctg aatagacgtg tttgccgtgt ttaatcgctt ctaaggcaat ttctttgtgc
    12121 agaaaatttg gtgtacaaat gtccaccaca tcgacattcg gatcggtaac caattttcgc
    12181 caatcgtcag tagcacgctg aaagccaaat tctcgggctt tttgatcggc taatgcttgg
    12241 ttgatttcgg caaggtattc cagttggatt ttgcctttaa gtggaaacag ggttggggct
    12301 tgagcgtagg caatggcgtg gcagcgaccg atatagccgg tgccaactaa gccgattttg
    12361 atggttttca taatactatc ccagtagggt gcgtttgcta acgcaccatt agaattttca
    12421 gtgcattggc aaacgcaccc tataagaaag cggtctggtt ttgcaaaatt tttacaaaat
    12481 cagaccgctt gtgttagcta tctataatgc tcctcgtctg ctcttcgcat aggtgtcgaa
    12541 ggcaacggca aggatgatga ttaagcccat aatgatttgt tggtagtaag cggaaacgtc
    12601 cattagtact aaaccgttaa tcaatacacc cataataatg gagccgatga tggtgcctgt
    12661 gactcgtccg tatcccccca ttagggaagt tccgccgata accactgagg caattacacg
    12721 tagctcaaaa gaaacgccgg caacggattc ggcactgcct aaacgggcgg agagaatgaa
    12781 accggcaagt cctgccaatg ctccgatcac cacataaaca ctgactaagg tacggttaat
    12841 attcacaccg gctaaacggg ctgcttccgg attgccacct accgagtaca catagcgtcc
    12901 ccagcgggtt ttatgcaatg cgaagtaacc gataatggcg actacggcaa aaatcactac
    12961 cggcaccggt acgcctaaaa tatcgccacg tccccaccag cggtaacctt cgtcaaatcc
    13021 ggcaattggc gagccgttat ttaacacaag tgttaaacca cgccaaattg tcataccgcc
    13081 aagcgtgata ataaacggtg gcagtttgag tttagtgacg cctaagccgt gtaaccaacc
    13141 aatgaaagtg cctaaaccta aacagatact caaacctatc agccagctca ttccgcccca
    13201 agcaccggct tctagcgtta ccgtattatc gcctttgata atataggccg cgaacattgc
    13261 ggtaacagca aggattgagc cgacagagag atcgatccct gcagttaaga tgacgaaagt
    13321 cattcctacc gccataatgc cgaaaatcga cacttcggtt aaaacgttat agatgttgcg
    13381 ttgcgataaa aatgccccgt tttgtgaagt gaagaaaata atcagtaaga tcaagaaaat
    13441 cagtacgccg aaacgttcaa agaaggcgat aaaatcgatt tttcctttgt catcgaccat
    13501 acccatattt tttagaaatt gcgttgtcat acaaacctct cttatgctgc cgctttacgc
    13561 tgaacgccaa cagccatcat tgacattaat ttttcttcgg tggcatcatc gccgtgaatt
    13621 tcgccagtta cccgaccttc ggaaagagtg ataatgcggt cggaaatcgc cataatttcc
    13681 ggtaaatcgg aggaaatcac taataccgca acaccttgtt ttgccatatc aaacagcact
    13741 tggtgaacct cagattttgc cccaacatca atacctcgtg tcggctcatc aacaattagt
    13801 actttcgggt tgagtgccat acaacgggct aaaatcactt tttgctgatt accacccgat
    13861 aatttgcggg cttcaagttc gctacttgcc attttgatgc gtaacgcttg gcggtaggtt
    13921 tcgattaaat catcttcttt ttgattatcg acaaacaagt tacccttcaa taatttgctt
    13981 aaaatcggca gggtcatatt ggttttaatc ggtaaaccga gaactaagcc ctcttttttg
    14041 cgatcttccg gcacaagggc aacccctttt tccaaagcat ctaacggcga ggtggcagca
    14101 taaggcttac cgtctaggct gatttcatca gccgtataat tttctacccc aaacaagcaa
    14161 cgggcaattt cagttcgccc tgcgccaact aagccggcga tccctaatac ttcaccctcg
    14221 tgaatgttaa aagagacacc gtggagagca atgccgtgtg gatcgaatgc cggtttttcc
    14281 cgatgcagat ttttcacagc taaacgtatt ggtcggtggg tatggtgagt ctcttctggt
    14341 ggacggcgag taaaggcaac ttcacgtcct accatcattt taataatttg atcgacattc
    14401 acatttttga cttcaccctc accagaatag cgcccgtctt ggaaaacggt gaaacggtcg
    14461 catagggcaa acacttcgtt taagcggtgg gtcacataaa tcacgctaat gccacggctt
    14521 tttaaatcac gcacgatttg gtgtagtgtt tccacttctt tatcacttaa ggcagcggac
    14581 ggttcgtcca taataatcaa cttagcgttt aaggtcattg cacgggcaat ctcgaccatc
    14641 tgctgttgtg ccacacttaa acgggaaact tgggtgtcag gtttgatatt taagccgaga
    14701 ttatccagca ctaattgtgc ttcctcattc accgcttttt cattgacgaa taaacctttc
    14761 accggctctc tgcccaaaaa gaaattttca gcaaccgtca tattcggtaa caagttaaat
    14821 tcttgataaa tcgttacgat gcctttgagt tggcgatcaa acggggaatc gctcaaactt
    14881 aaggtttcac cgttaaagat aatttcgcca cttgtttgtg gctgagcgcc tgaaagtgct
    14941 tttaataagg tcgattttcc tgcaccgttt tcacccaaca atgcgtgaac ttcgcctttt
    15001 cccacagtca gtttcacgcc attgagtgcc ataacaccag agaaactttt tgtcagatct
    15061 ttcacttcaa gtaagggagt agacatacaa cctccgtaaa aaaacgccct ccggcctcag
    15121 ccggaaggca gataaattat tcgctgattt ctgcaaaacg ttctgcttct tgcagattat
    15181 ctttcaggat aatttttggc ggatagtccg caccgctcac ttctttgctc tcacggatat
    15241 tgccaaccac ttgctctaat gcggtgctta ccgcaaaact tgggcgttgg tcagcggtga
    15301 gatacaacca gccatctttc acacgtgcaa gagcctcagg ggttgagtca aagccggtta
    15361 ctaaaatatc gccggctttc aaaccttggc tacgcaatgc ttcaatcgca ccaagtgcca
    15421 tatcgtcatt cgctgaaata atcacttctg gtttctcttt taaggttggt aacacacttt
    15481 caataatgcg taatccctca gaacggagcc agttaccggt ttgatcaacc acgattttat
    15541 atttgtcacc accggcagct aattcatcac gaataccttt ggtacgttca atgttagagg
    15601 ttgaacccgg ctggccggtt aaaagaataa tttttgcccc attcgggtat ttggctttca
    15661 ctgcttttgc gacttcttga ccgcctgtgt agttatttgc cccaaagtgt ggaaccggct
    15721 tactgctttc aacttttcgg tctaatgtcg cagcaggaat tttttctttg ataatttctt
    15781 ccactgcacc tgaaatcgca ttcacatcat tcggggaaat gataatgcct ttagcaccac
    15841 gggtaattgc attttctaag tcagaagcct gcttagtaga agaactttgc ccgtctaata
    15901 cttgcaattt gatctccaac tttttactgg tttctaccgc tactttttgt agttgaactt
    15961 caaacgggct ggataggttc ggtaagctaa ataccacaag ctcatctttc gcaaagctgt
    16021 tcattgctaa gcctaacgtt aaagcactca atacaaattt aatacgcttt ttcattacaa
    16081 aatcctcttt ttaagatggg aattgacggc gaatattgcc aatgttactt caaactgcga
    16141 aggaaactta agtcttattt caataataaa cctcaatgaa ataaattttt caatttagaa
    16201 tatatcattc aaaattttcc aaaccaaatg ctttgtttca aatttgttac gtagatcaca
    16261 tttttaggaa gagataaatg caagcggtca aaacaggtcg cttttttgca aaaatttgaa
    16321 taaaaatgac cgcttgtgag atgaaaacca ataaaaaagc ggtgatttct caccgctaaa
    16381 cactcaaaaa agaaatgtac tcgttattat aaggttggga aattaaatgc cgcttggcta
    16441 cgcaccgagc tgtccggcca acgggttgtg atggttttca tacgggtgta gaaacgcacg
    16501 ccgtctgtgc cgtacacatt gagaggcccg aaaatagagg ctttccaacc gccaaagcag
    16561 tggaacgcca ttggcacagg aattggaata ttcacgccca ccataccggc ttgtacatct
    16621 tgggtgaatt gacgtgctga atcgccatct gcggtgaaaa ttgcactacc attgccgtat
    16681 tggtgactgt taatgagtgc gatcccttcg gcataatctt tcacacgcac aacagagaga
    16741 accggtccga agatttcatc ttgccagatg gtcatttcag gtgtcacgtt atcaaacagc
    16801 gtacctccga caaagtaacc gttttcaaac ccttcgactt tatagcctcg accatcgaca
    16861 cagagtttcg ccccctgtgc caccccttga tcgatatagc tctcaatttt ggctttatgc
    16921 tctttggaaa tcaccggccc catatcattt tcaagcacgc cttgtggtag taagcctgaa
    16981 ccgattttca atgctttgac cttaggaatt agctcttcaa tgattttatc ggctaattca
    17041 tcaccaacaa ctaccgctac cgatagtgcc atacaacgtt caccggctgc accaaatgct
    17101 gcgcccagta aggcattaat tgtgccttgt acatcagcat ccggcataat caaagcgtgg
    17161 tttttcgcac cgcccaaggc ttgaacccgt ttgccgtttg ctgagccttt ctcataaata
    17221 tattgtgcaa ttgcagttga gccgacaaaa ctcaccgcct gaatgcgaga gtcggttaaa
    17281 agaatatcta ccgcttcttt atcaccttgc accacattga atacaccgtc cggcaagccg
    17341 gcttctttta ataattctgc caagcgaata gacacacttg ggtctttttc agacggtttt
    17401 aaaacgaaag tgttaccgca agcaagtgcc actgggaaca tccacatcgg taccattgcc
    17461 gggaaattga acggggtaat gcctgccact acgcccaacg gttgctggat tgagtgaata
    17521 tcaatgccac gccctgcatt ggcggagaac tcaccttttt gtaagtgtgg aataccagtg
    17581 gcaaattcca ccacttctaa accacgggtt aattcgccaa tcgcatcgga atagattttg
    17641 ccgtgttctg agctgattaa acgagccaac tcatcaaagt ttgcttccaa taactctttg
    17701 aatttaaata aaattctggc acggcgtagt ggtgattgtt gtgaccagct tttgaaagcc
    17761 tgatcggccg ctgcaattgc cgcatcgact tcgtttggca ggcttaattt gacttttttg
    17821 gtctcttcac cggttgcggg attaaatacc gaggtaacac gctggctttg gctttcaacg
    17881 actgcaccgt taataaaatt ttggacaaat tggctcattg gaggctcctt atcaactgat
    17941 tgagaggaaa aacggataaa atacagccga taaactaccg ctaaaaatgg aaaatatcaa
    18001 tacataatac taaaaaatga aaattttatt tcatttttgt gatctaagta gcaagtttac
    18061 agattgccgg tattaaaatg agacaaaatt tcgtatagtt tgaaagcgta ttccatttcg
    18121 ttaagcgagg tttcctatgt ctagtccatt attgtctaaa cccaatttca accaacatga
    18181 agggttaatt cagcacatta cccctgaaaa tgcacagtgg gaatatgttg gatttgatgt
    18241 ttatcagctc agtaagcaac aaattacgct ggaaagtggt gaaaatgaac tttgtctagt
    18301 ctttgtgacc ggttttggct ctgtctatgt tgatgattat gcttttgaaa atatcggcaa
    18361 ccgtaccacg ccatttgaaa aaattccgcc ttatgcggtc tatatcccgc cacacaaaag
    18421 cgtgttggtt aaaaccgaac tcaatttaga attggcagtg tgcaaagcac caagtcaggg
    18481 taattatccg gtgcgtttga ttagcccgaa ccatatcggt gtggaaaaac ggggctttgg
    18541 caacaatcaa cgcttggtgc ataatattct gccggaaacc gaagcagccg acagtttgct
    18601 ggtggtggaa gtctttaccg atgaaggcaa taccagttcc tacccaagcc acaagcacga
    18661 tgacaaacac tctaccgaag aaacctattt ggaagagacc tactaccacc gcttcgatcc
    18721 accacaaggt tttgcaatgc aacgggttta taccgatgat cgcacacttg atgaatgtat
    18781 ggcggtgtat gataaaaatg tggttaaagt gcctcgtggc taccaccctg ttgctaccat
    18841 tgccggctat aacaactact acctaaatgt tatggcaggg ccggtacgca aatggaaatt
    18901 tacttgggaa caagatcatc tttgggtgaa cagtgaaacc tataaagcca aatttgagta
    18961 atgcaagcgg tctttttcca ccaatttttt acaaaataag ggattaaaaa tgggacgctt
    19021 ttggcgtccc attcggttat actttcatac aaagatattt tatttctaaa aactcttcaa
    19081 taccgtactt cgaaccttcc cgcccaagtc cagactcttt ccagccgccg aacggagcga
    19141 tttcgttact gatgatcccc tcattaatcc cgacaatgcc atattccaac tgctccgata
    19201 ctcgccaaat tcgcccgata ttttggctga ataagtaagc cgccaaacca aactcagtat
    19261 cattcgccca ctggataacc tcttcttcgg tttcaaattt gaaaatcggg gcaaggggag
    19321 caaaggtttc ctcacgagcc actttcatcg cttgagtgac atttttcaga atggttggct
    19381 ggaagaatgt gccacccagt gcgtggcgtt caccgcctaa caccagttct gccccaagtg
    19441 aaagggcatc gttaatgtgg ctttcgactt tttccaccgc tcgttcacta attagtgcac
    19501 ctatcgtgac ctcttcctca aatggcgagc caagcttgat ttgagccact ttctcactca
    19561 attttgcaag aaattgctca taaatgcccg cttgcacata aattcggtta gcacagacgc
    19621 aggtttgccc accgttacgg aatttagagg caaacacgcc ctcaaccgct gtatctagat
    19681 ccgcatcatc aaacacaatc gccggtgcat taccgcctag ctccaatgcc aattttttta
    19741 ccgtccctgc cgattgttgc attaaaattt tgccgacacg ggtggagccg gtaaaggtga
    19801 gtttgcgtac ggtcggatta gtgctcaact cccgccctac accttcgaca tcgctactgg
    19861 taataatgtt aaatacccct ttgggaatac ctgcttgatc cgctaattgg gctaatgcta
    19921 aggcagaaag cggggtttct gccgccggtt taatcacaat cgcacaacct gccgctaacg
    19981 ccggtgccgc tttacgggta atcattgcat ttgggaaatt ccacggtgta attgctgcca
    20041 ccacgccaat gggttgttta gtcacaaaca agcggcgacc ggctttatct tgtggcaaga
    20101 catcgccata aatccgcttg ctttcttcgg caaaccactc gataaaactg gctccatagg
    20161 caatctcgcc tcgactttct gccaatggtt taccctgttc tagacttaaa atctgggcga
    20221 gttcttcttg gttttgcata atcagctcaa accatttacg caaaatcacg gaacgctctt
    20281 tgggcaataa tgcctgccat tttttctggg caactgcggc tgcttcaatc gcttgagcgg
    20341 tttcttccgt gcctaaatca gccacctcac cgattttctc accattagtc ggattctgta
    20401 ccgtaaaggt tttcccattt tggcttgaaa caaatttacc gttaatatag gcttggaaac
    20461 ggagtagcaa aaatttgtga tttggcataa tcactccttg aatggttaaa aagagaacaa
    20521 tattgactat gatccaattt cagtaaagag aaaagagctg aaaaataact ttttactcaa
    20581 taataaagca ccttagacaa gcgttcttct aaggtgcagc catttattat tgagaattaa
    20641 cttaaattct ctacatattt aataattaag atacaatcat tggagcccat acgaatccaa
    20701 aagcaagccc aacagcaacc ccaactaaag ctggaagcat aaacggatga tctataatat
    20761 atttgccagc acgagttgaa cccgtagtat ctaattccat cgctgctaat gaagttgggt
    20821 aggttggcag gataaaaatg cctgtaattg caatgaaaga agccaaaatt gcccagttag
    20881 ggatccccaa gcttactgct aatggaataa taagagcaga agttgaccct tgtgaataaa
    20941 gtaatgcaca agtaaaaaag agtactacag ctaacaacat tggatattca gttaaaatat
    21001 ttccaataga ggctttaatt tctattaaat gtgcatcgac aaaagtcata cctaatgtaa
    21061 caatcccgat aattaccgca atagaagtca ttcctgagcg gaaaattgga ctagccacaa
    21121 tcgtatcagg tttaattttt cctaccaaca tcattaagca cgaagaggct aacatcatca
    21181 caataattat atctcgggta ctcattgact tcccattttc atatactggc tttaaccctg
    21241 gaacggctgc aagtagaaca accaatacag ttgctagtaa gaaaatgcca atcgatagtt
    21301 ttgctccttt tgaataggta gattcactcg ctaacttacg agatgggctg acgattcctg
    21361 cttttaaacg ttctaaataa acaacatcat tttgcaattc acagccctgc ttagaagcaa
    21421 caaatgcagc aaccatagag gcaataaaag aaacaggtaa gcatactgct attacttgaa
    21481 aaaatgtaac actgttgttt tccattactg ctatcatagc cgccattgca gcactcaatg
    21541 gagaacctgc aatagctaat tgagaagaca caaccgagcc ggctaatgct cttgaagggc
    21601 gaataccact ctcttttgcc acttctgcaa tcacaggtaa ggtggaaaag acgataaaac
    21661 ctgtaccagc cataatcgtc attaaccaag taatcatcgg tgcaataaag ttaatatatt
    21721 taggattttt acgcatcaat acttccgcat aacgaacaag taaatccata cctcctactg
    21781 cttgtaacac agcagcacct attacaacag tcataataat cagcattaca tcaactggaa
    21841 tagaacccat aggtaaacca aaacctagag ttagaatcgc aagccctaaa ccaccatata
    21901 gtcctattcc taagccccca gaacgcagtc ctaaatagat tgcagcaagt accacaaaga
    21961 tttctgcata aatcatatcc atctccttaa attaatgagt ttgataccaa tcaattgctt
    22021 ttttaaccaa taccaacgtt gaatctacat aacgcattgg ctcacgctct atttcttgag
    22081 ctaaaataat aggtacttct gtacaaccta aaataattac ttctgcacct aaacgaatga
    22141 gttcatcacg ttgttgtaac attagctctg tggctttctc taactcacct gattttaata
    22201 aatagatact atccattact gccttttgac cattttctgt cgggcaaata aaagtcagtc
    22261 cttgtgcttc aagctgtttt ttgtataggt ctaccgccaa agttgcatca gttgccaaca
    22321 atccaacccg ccattttcca cacttcaaaa cctcatcaac cacacaatca atcatactta
    22381 gcatctctac ctgacttttg gccttcaagt gttcaaacca ataatgtgca gtattacatg
    22441 caataatgat gcaggttgcc cctgcactct caagcccttc aatatatttt tccattaccg
    22501 gagccggatt ctctccattt gctaaaatat agcgagttct atctggtatg tcgggaatag
    22561 aggaaatcaa taatggaata tgagcttgat cacaatcagc tggtgttaag cggataaatt
    22621 tttggaacat atctgctgtt gctgcaggtc ccattccacc taaaatgcca ataatatttc
    22681 ttgccataca cttctcctta taagatttaa tttactgcga tgacttatac aaacaagtta
    22741 tgcaaaaaag aaatgcaata aatcgaatca gtatgcaaaa aatgcaacaa ag
//
LOCUS       DANLXD010000033        22308 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.033, whole genome shotgun sequence.
ACCESSION   DANLXD010000033 DANLXD010000000
VERSION     DANLXD010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22308)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22308)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22308
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.033"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            8..730
                     /gene="arcA"
                     /locus_tag="PXD18_001040"
     CDS             8..730
                     /gene="arcA"
                     /locus_tag="PXD18_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator ArcA"
                     /protein_id="HDL6301485.1"
                     /translation="MKIPQILIVEDELVTRNMLKSIFEGEGYQVFQASNGEEMHSVLS
                     TNEINLVLMDINLPGKNGLILAREIRENMKLPLMFLTGRDNEIDKILGLEIGADDYIT
                     KPFNPRELTIRARNLLQRTMIDKENDVVKEQSEIESYRFNGWILDINSHSLISPEGEV
                     NKLPRSEFRALLHFCQHPGKIQTREDLLKKMTGRELKPHDRTVDVTIRRIRKHFEDHP
                     NTPEIIVTIHGEGYRFCGNIEP"
     gene            750..1268
                     /locus_tag="PXD18_001041"
     CDS             750..1268
                     /locus_tag="PXD18_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HDL6301486.1"
                     /translation="MKKLTIVALTCLFSTHLLAAPVGNTFTGIGVGVDVTTTKYKVEG
                     VKGKDSTGPALVVDYGIEQGNNFVGVVQGKAKVGSTKVFSDVKQKNKYTIAYQQGYRV
                     GSDLLPYVKVDASSSKIGNETYRGFGFGAGAKYAVSSDVELGAEYTRDNLKRSGTKLK
                     GNAFTANATYRF"
     gene            complement(1346..2575)
                     /gene="serA"
                     /locus_tag="PXD18_001042"
     CDS             complement(1346..2575)
                     /gene="serA"
                     /locus_tag="PXD18_001042"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDL6301487.1"
                     /translation="MAKISLDKSKIKFLLLEGVHQNAIDVLLAAGYTNIEVHKKALDG
                     QELIDAIKDAHFVGIRSRTFLTEEVLAQAPKLIAIGCFCIGTNQVDLNAAKRRGIPVF
                     NAPFSNTRSVAELVLAEMILLMRKVPTANAEVHRGVWNKSAAGANEVRGKKLGIVGYG
                     HIGSQLSILAEAIGMQVYFYDVENKLPLGNAQQVPTLEHLLSTCDMISLHVPEIDSTK
                     NLMSAERIAQLKEGSVLINAARGTVVDLDALAARIEDGSLRGAAIDVFPEEPASINDP
                     FVSPLCKFDNVILTPHIGGSTSEAQANIGTEVANKFVKYSDNGSTVTAVNFPEVSLPL
                     HTNTKRLLHIHENRPGMLNQINQIFVESNVNIAAQYLQTDAAIGYVVIDVESDNVDEA
                     LQRLKAIEGTIRARVLY"
     gene            complement(2612..3271)
                     /gene="rpiA"
                     /locus_tag="PXD18_001043"
     CDS             complement(2612..3271)
                     /gene="rpiA"
                     /locus_tag="PXD18_001043"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HDL6301488.1"
                     /translation="MDQQEMKKIAAQAALKFVKPDTIVGVGSGSTVNCFIDALASMKD
                     EIKGAVAASKASEQRLRDIGIEVFSANEVTELDVYIDGADEITPQGAMIKGGGAALTR
                     EKIVSSLAKKFICIVDKSKQVDVLGSTFPLPVEVIPMARSYVARQLVALGGSPEYREG
                     VVTDNGNVILDVHNFKIMEPLKMEHTINNIAGVVTNGIFAQRFANVTIVGTPEGAVIL
                     E"
     gene            complement(3416..4750)
                     /gene="glmM"
                     /locus_tag="PXD18_001044"
     CDS             complement(3416..4750)
                     /gene="glmM"
                     /locus_tag="PXD18_001044"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HDL6301489.1"
                     /translation="MARKYFGTDGVRGEVGKFPITPEFALKLGWAAGKVLATQGTKKV
                     LIGKDTRISGYMLESALEAGLTAAGLSAVFVGPMPTPAIAYLTRTFRAEAGIVISASH
                     NPYYDNGIKFFSSVGEKLPDEIEEAIEAMLDKPMDCVDSANLGRASRINDAAGRYIEF
                     CKGTFPSELSLEGYKIVVDCANGATYHIAPNVMRELGAEVLEIGTKPDGLNINEKCGA
                     TDIKALQKVVVEAGADVGLAYDGDGDRLIMVDHLGNKVDGDQILFILAREALRSGKLQ
                     GGVVGTLMSNMSLELALKELAIPFSRANVGDRYVLEQLKEKGWKLGGENSGHIIVLDK
                     NTTGDGIIASLQVLAAMASHKLSLNDLAKAVPLFPQVLLNVRFEKGAANPLESNEVKA
                     VAADVEKRLAGKGRILLRKSGTEPLIRVMVECEDAVLAQSCAEEIVEAVKRN"
     gene            complement(4776..6308)
                     /gene="ilvA"
                     /locus_tag="PXD18_001045"
     CDS             complement(4776..6308)
                     /gene="ilvA"
                     /locus_tag="PXD18_001045"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HDL6301490.1"
                     /translation="MMNETQHSQSAIDYLRSILSSNIYDLAQVTPLQKMEKLSERLGN
                     SIFIKREDRQPVHSFKLRGAFAMISNLSKAQKEAGVIAASAGNHAQGVALSAKHLGLR
                     ALIVMPQNTPAIKVDAVRGYGGEVLLYGANFDEAKAKAIELSTELGMTFIHPFDSPAV
                     IAGQGTIGLELVQQKPDLDYVFIPVGGGGLIAGIAVLIKQVMPNIKVIGVESKDSACL
                     YHALKQGQPTDLERVGLFADGIAVKRIGDETFRLCQQYVDDVVLVDNDEICASMKLIF
                     ENVRAISEPSGATSLAGLKKYVKEHQLQDKNLACILSGANVNFHTLRFVSERCEIGEK
                     REALLAVTIAEQKGSFLKFCEILGNRAVTEFNYRHSDDKQACIFVGVRISGSAEKVEI
                     IKDLQQNGYDVADLSDDDIAKTHIRYMVGGRASSIQYEQLYSFEFPEQKGALLKFLQM
                     LTNWDISLFHYRAHGADYGDILAAFALNRGDEVELNRHLEQLGYRFQNVSESPAYQYF
                     LK"
     gene            complement(6569..7162)
                     /gene="slyD"
                     /locus_tag="PXD18_001046"
     CDS             complement(6569..7162)
                     /gene="slyD"
                     /locus_tag="PXD18_001046"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDL6301491.1"
                     /translation="MNITKDLVPSIAYQVRTQEGVLVDEAPVNQPLEYLHGHNNLVEG
                     LEKALEGKAVGDVFEVRVKPEEGYGEYNDNMVQRVPKDVFMGVDELEVGMRFIADTDL
                     GPLPVVITEVDGDEVVVDGNHMLAGQELLFSVEVVGIREATAEEIAHGHVHGGHEHGC
                     GCGGHDHHHDHDGCCGGHDHDHHHHHGHGGCGCGGHH"
     gene            complement(7265..7405)
                     /locus_tag="PXD18_001047"
     CDS             complement(7265..7405)
                     /locus_tag="PXD18_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301492.1"
                     /translation="MKKLIKVCGLISATIFLSGCLVTSVVGGVVGTAVDVVDTVTPDI
                     ID"
     gene            complement(7477..8163)
                     /gene="aqpZ"
                     /locus_tag="PXD18_001048"
     CDS             complement(7477..8163)
                     /gene="aqpZ"
                     /locus_tag="PXD18_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HDL6301493.1"
                     /translation="MKKYFAEFFGTFWLVFGGCGSAVLAAGIPELGIGYAGVSLAFGL
                     TVLTMAYAVGHISGGHFNPAVSIGLLVGGRFNAKDLVPYIIAQVIGAIAAGAVLYTIA
                     SGVPTFDATAGFAGNGYGEHSPHGYSLTAALLIEVVLTAFFLIIIMGATDKRAPAGFA
                     PIAIGLALTLIHLISIPVTNTSVNPARSTGVALFQGSWAIEQLWLFWVAPIVGAIIGA
                     VVYRFIAEEK"
     gene            complement(8351..9070)
                     /locus_tag="PXD18_001049"
     CDS             complement(8351..9070)
                     /locus_tag="PXD18_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253715.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HDL6301494.1"
                     /translation="MKLKNFLTILPLAVATAVTSAETHTVEHKDKPASFNFSTEVSRT
                     VEKDVMQASVYSQKSGNSLPELKKFVSENLNRVLAEAKKHPSIEVQAEGVTNHVNYNN
                     KGNIDGWDTSGSIQLKSKDFDAMAAVLENLGKDVAIRYIDFSVSPEKMASLEDEMTLE
                     IISKFQHKADVIQKALGAKTYKLVNINIQTPNDGGRPYYEHRAMYAVSSMAQSKSMDE
                     IPLEAGKTTISATASGSVEFE"
     gene            complement(9128..9865)
                     /gene="tsaA"
                     /locus_tag="PXD18_001050"
     CDS             complement(9128..9865)
                     /gene="tsaA"
                     /locus_tag="PXD18_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HDL6301495.1"
                     /translation="MNSTSNQLTPIQLNPIGFVESPYDEKFSVPRQPNLVAEGKGILR
                     LIPPYNTPDAVRGLEKFSHIWLIFQFHHIPEREWHATVRPPRLGGNERVGVFASRATH
                     RPNPLGLSKVKLEAVVAGGSEVYLKLGSVDLVNGTPIFDIKPYIAFADSEPQAVSGFA
                     QQKPQARLAVRFSEEAKQAVEFCRNFAKFGIEQPLSFLADVIAQDPRPAYQQGKPSER
                     VYGMNLAGYNIRWQIENDTQAIVLSIE"
     gene            10045..10953
                     /locus_tag="PXD18_001051"
     CDS             10045..10953
                     /locus_tag="PXD18_001051"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HDL6301496.1"
                     /translation="MNKNSLFSIWFTTARPKTLPLALASIIVGSALAHWAGKFDVVTT
                     LLAFITTILLQILSNFANDYGDHVKGSDTKERIGPLRAIQHGVIGGEQLKKAVIILSL
                     LSFVSGVALSAYAFETVQDLFFFIGLGIVSIIAAITYTVGKKAYGYLGLGDLFVLIFF
                     GFVAVIGVFYLQAHSLPIMILLPAFGCGLLSVAVLNINNLRDINQDRQAGKNTLIVRI
                     GSQNGRKYHVALLVLAVISYLIFAISEFEHWYSFIFLLSVPLLAKHARFVYQHKDPKE
                     LYPILGQMAGLALLTNLLFSLGIVLG"
     gene            complement(11029..12015)
                     /locus_tag="PXD18_001052"
     CDS             complement(11029..12015)
                     /locus_tag="PXD18_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3298 domain-containing protein"
                     /protein_id="HDL6301497.1"
                     /translation="MKKSLLALLIGSVFLISACEDGKMTQTVLEAEKQIVQLGTELKN
                     AQADLAKKEAEVAELSGVKAENEKLKSELENAQQNTALNVEIVKIFDKKEVIKHQVDP
                     KQEFAIEESTVSAFVSLPKTNFDWLNQLLINQAYDYNEEQGRKLKNPTEEEFKKHREA
                     VYQGLVESVKTEPAIGYDDHISSAFIGQRNNIATFTMMHYTYMGGAHGMHYTQYINVD
                     LAKKAIIGLNDLISPKNQVQLKDILWENYSSVRVDENGNYNGFADKKEFRISDQFYFT
                     PHGIAFVYPPYELGAYAEGDIEVEADWYIINKLLNSEYQRGEKDGFFEELDN"
     gene            complement(12109..13980)
                     /gene="rpoD"
                     /locus_tag="PXD18_001053"
     CDS             complement(12109..13980)
                     /gene="rpoD"
                     /locus_tag="PXD18_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HDL6301498.1"
                     /translation="MENQADQQLEQQSQLELLISQGREQGYLTLSEVHDHLPEELVDA
                     EQIEDIIQMINDMGIQVLEAAPDADDLLLAENIADEDVVEEATKVLSTVESELGRTTD
                     PVRMYMREMGTVELLTREGEIDIAKRIEEGINEVQCAIAEYPEALSGLLACYAQVETG
                     EMRLSDLVTAFVDPNILEEAPLEDIEAALGEDEESSDVPDVDDENEDENGDSSSDSSD
                     DSSIDPELAREKFEALRSQHEKVLLVIQKHGRTSKKSKEQIEILSHIFREFRLVPKQF
                     DLLVASMQKLMKQVRTEERQIQRYAVEYAGMKKADFLKAFQGHELSEAWIEKAINAKK
                     NAAPKLANYVDNIRVNIANLQNLEQTSGLTIAQIREIGGRISNGELKARRAKKEMVEA
                     NLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAIT
                     RSIADQARTIRIPVHMIETINKLNRISRQCLQEMGREATPEELAERMGMPEDKIRKVL
                     KIAKEPISMETPIGDDDDSHLGDFIQDESLELPLDSATAESLRMATNEVLEGLTPREA
                     KVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSETLRSFLDD"
     gene            complement(14239..15987)
                     /gene="dnaG"
                     /locus_tag="PXD18_001054"
     CDS             complement(14239..15987)
                     /gene="dnaG"
                     /locus_tag="PXD18_001054"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDL6301499.1"
                     /translation="MKGTIPRSFIDDLIARTDIVEVINSRVKLKKAGRDYQACCPFHH
                     EKTPSFSVSQSKQFYHCFGCGVHGNVITFLMDYDKLEFPEAIEELAAMHGLEVPRENV
                     IQRDGKPQANFKTKRNLYELMEAVAKFYQQNLSHQIEPQSYLQQRGLSEEIIERFEIG
                     FAPNAFDAALRTFGQSQEDIQKLLDTGVLTKNDSGRIYDKFRNRVMLPIRDKRGRVIA
                     FGGRVLPNDEQGAKYMNSPETVIYHKGSELYGLYQALKVNETPDYLFVVEGYMDVVAL
                     AQFGVDNAVASLGTATTGEQIQQMFRCTEQIVCCYDGDRAGRDAAWRALENALPYLQD
                     GRQLKFIFLPDGEDPDTFVRSQGKEGFEQYVAQNAKPLSDFLFDSLLADVDLSSKEGK
                     SKLAALAVPLINRIPGEMLRVYLRNILGQKLGILDPTQIEALLPTKKAAEKPLHQAVK
                     MKRTPMRLLIALLIQNPYFVKFVPDVSALASLKDPGFTLLTDIVATCQQNAGISMGGL
                     LEHYREDPQYKIVEALANWDHLELPENIERTFIDTLDFLYAKLVELRKEELIAKDRTV
                     GLTDDEKKEYALLMFQ"
     gene            complement(16141..16356)
                     /gene="rpsU"
                     /locus_tag="PXD18_001055"
     CDS             complement(16141..16356)
                     /gene="rpsU"
                     /locus_tag="PXD18_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005701713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HDL6301500.1"
                     /translation="MPVIKVRENESFDVALRRFKRSCEKAGILAEVRAREFYEKPTTI
                     RKREKASLAKRHAKRNFRENARNTRLY"
     gene            complement(16504..17100)
                     /locus_tag="PXD18_001056"
     CDS             complement(16504..17100)
                     /locus_tag="PXD18_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HDL6301501.1"
                     /translation="MSLLPMNEITSLNQLDLQKSYSYADYLLWKFKERVEIIKGKIVA
                     MSPAPTRFHQRISMKMTAKFLEVFDNHQCQIYSAPFDVRFPDENGKVKTVVQPDLCVI
                     CDVSKLDERGCVGAPDLVVEILSPGNTKREMKDKYELYQEQGVKEYWIVSPETRTIQI
                     FVLENGKYIGIQPVAEDEPATSVVFPALSFSTEKLFEL"
     gene            17242..18498
                     /locus_tag="PXD18_001057"
     CDS             17242..18498
                     /locus_tag="PXD18_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HDL6301502.1"
                     /translation="MHLNFKKIDNSHIALFYNVLVATFFVTVLTFKKGYSYVPMALGI
                     IATLSFLFYRFKLKQKWLLDKEDKFFIFSLIGYFLTFAMSAIFNGDGIREIDNPIQIL
                     LLIPLIILFRLYPIKKETVLHFIPIGALVAGCIAIYQRFILNLKFPFPEIMRIQSGNI
                     AILLSLFSIAIAFYWLSKKRIKTGIAYLVFAMFGLFASILTGARGGWLAFIPICFFIL
                     FLNLRQLNKKAIFLILLALISSLSFFISKPEFGIQKRYNAAKNDIIVFLEKGNRHSSL
                     GARFDMWENALIGIREKPLLGHGSTGYETFKKKQIETKQMAKTTLRFNSLHNQYLEAF
                     VKRGVVGFMALMAILIIPFVIFAKRLKAKNREVKCMAILGIVHIISHSFFFLSQSFLA
                     HNSGSLFYFFVLILLYHLVKQNEEII"
     gene            complement(18600..19607)
                     /gene="rfbB"
                     /locus_tag="PXD18_001058"
     CDS             complement(18600..19607)
                     /gene="rfbB"
                     /locus_tag="PXD18_001058"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HDL6301503.1"
                     /translation="MIILITGGAGFIGSALVRYLIEHTPHTVINVDKLTYAGNLASLE
                     SVAHHERYHFEKADICASGQISEIFGKYQPDVVMHLAAESHVDRSISGAADFIQTNIV
                     GTYTLLEAARAYWDTLPEPRKSAFRFLHISTDEVYGDLAKSEELFTEKTPYNPSSPYS
                     ASKAASDHLARAWHRTYGLPTVITNCSNNYGAYQYPEKLIPLMILNALEGKSLPVYGN
                     GLQVRDWLFVEDHIRALYLVLQKGQIGETYNIGGHNEKTNIEVVRSICSILQEMVPNN
                     PLVVGQYADLITYVQDRPGHDFRYAIDTSKIEKELDWKPKETFESGLRKTVEWYLANR
                     N"
     gene            complement(19604..20185)
                     /locus_tag="PXD18_001059"
     CDS             complement(19604..20185)
                     /locus_tag="PXD18_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase"
                     /protein_id="HDL6301504.1"
                     /translation="MLEKIEKLIDEINKLHLAFSKDYFETGKIEKVNLKHTFAKVPTP
                     HILAYRLNLHESINDYLYRADLEGISYFYRVKTSESILDKIERFKQRSEGYPVNSILN
                     DIFGARIIVSSEVIQQVMESLDYWQEKYGLKNWYLRDKDEYVGIHIYFKNSSNFYYPW
                     ELQIWDKKDAEKNIQSHIKYKRNFVNQISYSPL"
     gene            complement(20206..21477)
                     /locus_tag="PXD18_001060"
     CDS             complement(20206..21477)
                     /locus_tag="PXD18_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HDL6301505.1"
                     /translation="MSIQQKKRHSRWYERIFFSTAVQSILGVMFSSVLPAIYFWGEKF
                     NSIETRSNTIIATSLAFVMIAISLRVLMKYPGNKSASFVFSTVISWYAVLLIVLTIFR
                     FDYSNTLLGTSFILTILFCFIGYFLSRSWIIPKIALVPFGRAINLNRIQNVEWIQLSE
                     PILGEKRINSIAVDLHYPDLSAEWHKFLAKCTLNGIPVYNVRQLEESLTGRVKIRHMY
                     ENDLGSLLPSPIYSLVKRIIDIALIVATFPITLPIMTITAIAIRLESEGGAMFIQKRV
                     GQGGKEFNIYKFRSMCKDSEKDDAQFASSADMRVTRIGKFIRKTRIDELPQFFNVLKG
                     DMSLIGPRPEQTAFVDKFEEEIPFYNYRHIVKPGISGWAQVVQGYAADVDDTKVKVEH
                     DFYYIKHFSLWLDILIIFKTLKTMLTGFGAR"
     gene            complement(21481..22289)
                     /locus_tag="PXD18_001061"
                     /pseudo
     CDS             complement(21481..22289)
                     /locus_tag="PXD18_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_162680708.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
BASE COUNT         6516 a         4923 c         4050 g         6819 t
ORIGIN      
        1 ttaaaagatg aagatcccac aaatcttaat tgttgaggat gagttagtaa caaggaatat
       61 gctgaaaagc atttttgaag gagaaggata tcaggtattt caagcatcta acggcgagga
      121 aatgcactct gttctgagta caaatgaaat caatcttgtg ctaatggaca ttaacttacc
      181 gggaaaaaat ggattaattc tcgcccgaga aattcgagag aatatgaagc taccattaat
      241 gtttttaacc ggtcgcgaca atgaaattga taagatcctc ggtttagaaa taggtgccga
      301 tgactatatc actaaaccgt ttaatcctcg agaattgact atccgagcga gaaatttatt
      361 gcaacgaacg atgatagata aagaaaacga cgttgtaaaa gagcaatctg aaattgaaag
      421 ctatcgcttt aacggttgga tcttagacat taacagtcat agtttaatct caccagaagg
      481 tgaggtaaat aaattaccac gtagtgaatt tagggcttta ttacattttt gccaacatcc
      541 tggaaaaatt caaacacgtg aagatttatt gaaaaaaatg accgggcggg aactaaaacc
      601 tcatgataga accgttgatg ttactattcg ccgtattcgt aaacattttg aagaccaccc
      661 caatacccca gaaattattg tcaccattca cggtgaaggc taccgtttct gtggtaacat
      721 cgaaccttaa tcaagatagg agtaatttta tgaaaaaatt aactattgtc gcattaactt
      781 gcttattttc tacccatcta ttagccgctc ctgtcggaaa tacatttact ggcatcggtg
      841 tcggtgtaga tgtaactaca acaaaataca aagttgaagg agtaaaaggc aaggattcca
      901 caggtccggc attagttgtc gattatggta ttgagcaagg caataacttt gtaggcgttg
      961 tacaaggaaa agcaaaagta ggtagtacaa aagtatttag cgatgtaaaa caaaaaaata
     1021 aatatactat agcttatcaa caaggttatc gtgttggatc cgatttatta ccttatgtaa
     1081 aagtagatgc cagctcaagc aaaatcggta atgaaaccta tcgtggcttt ggtttcggtg
     1141 ctggtgcaaa atatgcagtt tcaagcgatg ttgaattagg tgcagaatac actcgcgata
     1201 atttaaaacg tagcggcaca aaattaaaag gtaacgcttt caccgcgaat gcaacttatc
     1261 gtttctaatc ttagcggtaa agttttctga aaaaataacc gcttgtaaca caaaagagcc
     1321 tgaagtgatt caggctcttt gccttttaat ataatactcg ggctcgaatc gtgccttcga
     1381 tcgcttttaa acgttgtaat gcttcatcaa cattgtcgct ctctacatca attacaacat
     1441 aaccgatagc tgcatcggtt tgtaaatatt gagcggcaat attcacattt gattccacaa
     1501 aaatctggtt aatttgattt aacatacctg ggcgattctc gtgaatatgt aataaacgtt
     1561 tggtattagt atgaagcggt aaggatactt cagggaaatt cactgccgtc acggttgaac
     1621 cgttatctga atatttcaca aatttattgg caacttcggt gccgatattt gcctgagctt
     1681 cagaggttga accaccaata tgtggcgtta aaatcacgtt atcaaacttg cacaatggtg
     1741 acacgaacgg gtcattaatt gatgccggtt cttccggaaa tacgtcaatc gccgcaccac
     1801 gcaatgagcc gtcttcaatc cgagcggcta atgcgtctaa atcgaccact gtaccacgag
     1861 cggcattaat taacaccgag ccttctttta attgagcaat gcgttctgca ctcattaggt
     1921 ttttagtcga gtcgatttcc ggaacgtgta gtgaaatcat atcgcaggtt gaaagcaaat
     1981 gctctaatgt cggcacttgc tgtgcattac cgagtggtag tttgttttca acatcataga
     2041 aataaacctg cataccaatg gcttcggcaa gaatactaag ctgtgaaccg atatgaccat
     2101 atcccacaat acctaatttc ttgccacgta cttcgtttgc acctgctgcc gatttattcc
     2161 acaccccacg atgcacttcc gcatttgcag tcgggacttt acgcattaat aaaatcatct
     2221 ctgccagcac taattctgcc accgagcggg tatttgagaa cggtgcattg aataccggaa
     2281 tacctcgtct tttcgccgca ttcaaatcaa cttggtttgt accgatacag aaacaaccaa
     2341 tcgcaattaa tttcggagct tgagccagta cttcttcggt taaaaaagta cgcgagcgaa
     2401 taccaacaaa gtgtgcatct ttaattgcat caattaattc ttgaccgtct aatgcttttt
     2461 tatgcacttc aatattggta taaccagccg ctaagagtac atcaattgcg ttttgatgta
     2521 cgccctcaag cagaaggaat ttgatcttgg atttatccaa agaaatttta gccatttttt
     2581 gctcctaagt atttgtattt gcaataataa attattctaa aataactgca ccttcaggtg
     2641 tgccgacaat ggttacattg gcaaaacgtt gtgcaaaaat accgttagtc accacgcctg
     2701 caatattatt aatggtatgt tccattttca acggctccat aattttaaag ttatgtacat
     2761 ctaaaatcac attgccgtta tcagtgacca cgccctcacg gtattccggc gaaccaccta
     2821 aggctacgag ctgacgagcc acataagaac gagccattgg gatcacctcc accggcagag
     2881 ggaaagttga acccagcaca tcaacttgtt tggatttatc cacaatgcag ataaattttt
     2941 tcgctaatga actcacgatt ttctcacggg taagtgctgc cccgccacct ttaatcatcg
     3001 ccccttgtgg cgtgatttca tcagctccgt caatatacac atctaattcc gtcacttcat
     3061 tggcactgaa tacttcaatg ccgatatcac gcaaacgctg ttccgaggct ttagaggcag
     3121 caaccgctcc tttaatctca tctttcattg aagcaagggc atcaataaaa cagtttacgg
     3181 ttgaaccact tcccacccca acaatagtgt ccggttttac aaattttaat gcagcttgtg
     3241 ccgcaatttt tttcatttct tgttgatcca tttttacctc cacttgtagg gcaaatcatc
     3301 atttgcccac ttcggcaagg cgaaaaaaat tttcgcccta ctacatctat tctacacata
     3361 tatgtaacaa gcggtcatat ttggcaaatt ttttaccaaa aacgaccgct tgtcattagt
     3421 tacgttttac tgcttcaaca atctcttccg cacagctttg agcaagtaca gcatcttcgc
     3481 actccaccat cactcgaatt aatggctcag tgcctgattt acgcaataaa atacgccctt
     3541 tgcctgccaa gcgtttttcc acatctgccg ctaccgcttt cacttcgtta ctttcaagcg
     3601 gatttgccgc ccctttctca aagcgaacat ttagcagaac ttgcgggaac agaggcactg
     3661 cttttgccaa atcattcagg cttaatttgt ggcttgccat tgctgctaat acttgcagtg
     3721 aggcaataat accatcaccg gtggtgtttt tatctaacac gataatatgc ccggagtttt
     3781 cgccacccag tttccagcct ttttctttaa gctgctctag tacatagcgg tcacccacgt
     3841 tagcacgaga gaatggaatg gctagctctt ttaaagctaa ttccaagctc atattactca
     3901 ttaatgtacc gactacaccg ccttgtaatt tgcctgaacg tagagcttct cgggctaaaa
     3961 taaatagaat ttggtcgcca tcaactttat tgcctaagtg atcgaccata atcaaacggt
     4021 cgccatcacc atcgtaagct agaccaacat ccgcacctgc ttctaccacc actttttgaa
     4081 gtgctttaat atccgttgca ccacattttt cgttgatgtt taaaccgtcc ggcttagtac
     4141 cgatttcaag cacttctgcc cctagctcac gcattacatt cggcgcgata tggtaggttg
     4201 caccgttggc acaatccacc acaattttat agccttcaag gcttagttca gacgggaaag
     4261 tgcctttaca aaactcgata taacgtcctg cggcatcatt aatacgactg gcacgaccta
     4321 aatttgctga atctacgcaa tccataggct tatcaagcat tgcttcaatc gcttcttcaa
     4381 tttcatcagg tagtttttca ccaaccgacg agaagaattt aatgccgtta tcgtaataag
     4441 gattgtgaga ggcagaaatc acaatgccgg cttccgcacg gaaagtacgg gttaaataag
     4501 caattgccgg agtcggcatc ggaccaacga atactgctga taaaccggct gcggttaaac
     4561 cggcttccag agccgattcc aacatataac cggaaatacg ggtatcttta ccgattaata
     4621 cttttttcgt gccttgggtt gccaacactt tacctgctgc ccaaccgagt tttaatgcaa
     4681 attcaggtgt aattggaaat ttacctactt caccacgcac accgtctgtg ccgaaatatt
     4741 tacgagccat tctaattcct aagattgata aaaatttact ttaaaaaata ttgatatgcc
     4801 ggactttcgc tcacattttg gaagcggtaa cctagctgtt ctaaatgtcg gtttaattct
     4861 acttcatcgc ctctgtttaa tgcaaatgcg gcaagaatat cgccataatc ggctccgtga
     4921 gctcggtaat ggaataacga gatatcccag ttagtcagca tttgtaagaa ttttagcaat
     4981 gcccctttct gctctggaaa ttcaaagcta tagagttgct catattgaat ggagcttgct
     5041 ctaccgccta ccatataacg aatatgggtt ttggcaatat catcgtccga taaatctgcc
     5101 acatcatagc cgttttgttg cagatcttta ataatctcta ctttttctgc cgagcctgaa
     5161 attcgcaccc ccacaaaaat acaggcttgt ttatcatcgg aatggcgata gttaaattcc
     5221 gttaccgcac ggttgcctaa aatctcgcag aattttaaga aactaccttt ctgttcagca
     5281 atggtgactg ccaataaagc ttcacgtttc tccccgattt cacaacgctc tgacacaaaa
     5341 cgtaaggtgt ggaaattcac attcgccccg gaaagaatgc aagctaagtt tttatcttgt
     5401 aattgatgct ctttcacata ttttttcaaa ccggcaaggg aagttgcccc ggacggctcg
     5461 gaaatcgcac gcacattttc aaaaatcaac ttcattgagg cacagatttc atcattatcc
     5521 accaacacca catcatcaac atattgctga cacaggcgga aagtttcatc gccaatgcgt
     5581 tttaccgcaa taccgtcagc aaaaagccca acccgttcta aatcggtcgg ttgcccttgc
     5641 tttaaggcgt gatataagca agcagaatct ttagattcga ccccaatcac tttaatattc
     5701 ggcatcacct gcttaattaa aaccgcaatg ccggcaatta agccgccacc gcccactgga
     5761 ataaatacat aatctaaatc cggcttttgt tgcaccagtt ctaagccgat tgtgccttgc
     5821 cctgcaatca ctgccgggct gtcaaacggg tgaatgaagg tcatacccaa ttcggtggaa
     5881 agctcaatcg ctttcgcctt agcttcatca aaattcgccc cataaagcaa cacttcacca
     5941 ccatagccac gtaccgcatc aaccttaatt gccggtgtgt tttgcggcat tacaatcaag
     6001 gctcttaaac ctaaatgttt ggcagaaagt gccacccctt gtgcgtggtt gcctgctgaa
     6061 gccgcaatga ctccagcctc tttttgtgct ttggataaat ttgagatcat cgcaaaagca
     6121 cctcgcaatt taaagctgtg aaccggctgt cggtcttcac gtttgataaa aatagagttg
     6181 cctaaccgct cagacagttt ttccattttc tgtaaagggg tcacttgcgc taagtcataa
     6241 atatttgagc ttaaaatcga gcgtaaatag tcgatagcgg attgggaatg ttgtgtttcg
     6301 ttcatcattt tgaaaggtta tttattgtta gattgagata aagacattgg taaatttcca
     6361 aggaaaattg accgcttgtt tggttattta gcaatggctt taacagggaa tatttcctct
     6421 cgcccgtttg cgggagagag acagcttaaa atttcgttca gaaattttaa gcagagagag
     6481 gggaaacctt ggatatcccc ctctccctcc gcaaatcttc gatttgctcc accctctccc
     6541 gcaagcgggg agaggggaaa tcacaaagtt agtgatgacc accgcaacca cagccaccgt
     6601 gtccgtgatg atggtgatga tcgtggtcgt gaccgccgca gcaaccatcg tgatcgtgat
     6661 gatgatcgtg cccaccacaa ccgcaaccgt gttcgtgtcc gccgtgaacg tgtccgtgtg
     6721 cgatttcttc cgctgtcgct tcacgaatgc caaccacttc cacagagaaa agtaattcct
     6781 gaccggctaa catatggtta ccgtccacca caacttcatc gccatctact tcggtaatta
     6841 ccaccggtag cggacctaaa tccgtgtccg caataaaacg catacccact tctaattcat
     6901 cgacgcccat aaatacatct ttcggtacac gttgaaccat attatcgttg tactcgccgt
     6961 aaccttcttc cggtttcaca cgcacttcaa acacatcgcc tacagctttg ccttcaaggg
     7021 ctttttctaa gccttctacc aagttgttgt gaccgtgtaa atattctaac ggttggttta
     7081 ccggtgcttc atctactaat acgccttctt gagtacgcac ttgatatgca atgcttggca
     7141 ctaaatcttt tgtaatgttc atattgaatc ctttaattca tcggttttat aaaatagcaa
     7201 gccattgtaa cgctttattt tatatttgca atctatctgg aaattttaac cgcttgtcag
     7261 taaattagtc gataatatca ggggttacgg tgtctaccac atcaactgcg gttcccacca
     7321 ctccaccaac caccgaagtt accaaacaac cacttaggaa aatagttgct gaaatcagcc
     7381 cacatacttt gattaatttt ttcattttaa aatcctttca aaaacaaaaa acagccctaa
     7441 tcaagactag agctgcatca tatttattcg cttaaattat ttttcttcag cgataaagcg
     7501 ataaactacc gcaccgataa ttgcaccgac aatcggagca acccagaaca accataattg
     7561 ctcaatcgcc cagctgcctt ggaataacgc tacaccggtt gaacgtgccg ggtttactga
     7621 ggtattggtt accggaatgc tgattaagtg gattaaggtt aaagccaaac caatagcaat
     7681 cggagcgaaa cctgctggag cacgtttatc ggttgcaccc ataatgatga ttaagaagaa
     7741 tgccgttaat accacttcaa ttaataatgc tgctgttaag ctatagccgt gtggcgaatg
     7801 ctcaccataa ccgttgccgg caaagcctgc tgtagcatca aaagtcggaa cacctgaagc
     7861 aatggtgtat aacactgcac cggcagcaat cgcaccgatt acttgggcaa tgatataagg
     7921 cactaaatct ttagcgttaa aacgaccgcc gactaataaa ccgattgaaa ccgccgggtt
     7981 gaagtgacca cctgaaatat gaccgactgc atacgccatt gttaatacgg ttaaaccgaa
     8041 ggctaacgaa acgcctgcat aaccgattcc taattcagga atgcctgctg ctaaaactgc
     8101 actgccgcaa ccaccaaaca ctaaccaaaa tgtcccgaaa aactcagcaa aatatttttt
     8161 cattttttat ccttacccta aagggtgaat cacacataag tgtattaact ttccgaatgc
     8221 tataaaacat agccaataaa atatgagtat actaaaaaaa gtaaagacgc atatttctta
     8281 attgatagta tagaccgatt ttttcctcca attaaagtaa aaatacaact ctatacaaat
     8341 ctatacattt ctattcaaat tccacacttc ctgaagcggt agctgaaatt gtggttttac
     8401 ctgcttctaa cgggatttca tccatagatt tgctttgtgc cattgatgaa actgcataca
     8461 ttgctctgtg ttcataatat ggtctaccac catcatttgg agtttgaata ttgatattaa
     8521 ctagcttata tgttttcgcc cctaaggctt tttgaatcac atcggcttta tgctgaaatt
     8581 tgctgataat ttccagcgtc atttcatctt caagggacgc cattttctct ggcgatacac
     8641 taaaatcaat gtaacgaatc gccacatctt tacctaaatt ttccaacacc gctgccattg
     8701 catcaaaatc tttgcttttc aactgaatgc taccagaggt atcccaacca tcaatattcc
     8761 ctttgttgtt ataattaacg tgattagtca caccttcagc ttgtacttca atcgatggat
     8821 gtttttttgc ctcagccaat acacgattca ggttttcaga tacaaatttt ttcagctccg
     8881 gcaaggagtt acctgatttt tggctataca cacttgcctg catcacgtcc ttttccaccg
     8941 tgcgagagac ttcggttgag aaattaaaag aagccggttt atctttatgt tccacggtat
     9001 gagtttccgc tgaagttacc gctgttgcga ctgcaagcgg tagaatggta agaaaatttt
     9061 tcaatttcat aatcagtcct taaaagggtt aaaaatcatt tcttagatct cacttgcgta
     9121 ggaaagttca ttcaatcgaa agcacaatcg cctgtgtatc attttcaatt tgccagcgaa
     9181 tattgtagcc ggcaaggttc ataccataaa ctcgctcact aggtttccct tgttgatacg
     9241 ccgggcgagg gtcttgggcg atgacatcgg caagaaaact aagcggctgt tcgatgccaa
     9301 attttgcaaa atttcggcaa aattcgacag cttgttttgc ctcctcgcta aaacgcaccg
     9361 ctaatcttgc ttgtggtttt tgctgagcaa aaccggaaac cgcttgcggc tcgctatctg
     9421 caaatgcaat gtaaggcttg atgtcaaaaa ttggtgtgcc gttaactaaa tccacgctgc
     9481 ctaatttcaa ataaacttca ctcccccccg ccactaccgc ttctaacttc actttcgata
     9541 agccaagcgg attcggacga tgggtggcac ggctggcaaa gaccccgacc cgttcgttcc
     9601 cgcccaagcg aggcggtctg acggtggcgt gccactctct ttcgggaatg tgatggaatt
     9661 ggaaaatcaa ccaaatatga ctaaatttct ccaagcctct gactgcatcg ggggtattgt
     9721 aaggcggaat taaacgtaga atgcctttcc cctccgctac caaattcggc tggcgaggca
     9781 cggaaaattt ttcatcatag gggctttcca caaaaccgat agggtttaat tgaatcgggg
     9841 ttagttgatt tgaggtagag ttcattacgc ttttttctgt taaaataata taaaatattg
     9901 gacataatga tatgaaattg aggatggtgc aagcgtccac gcttgtacca attcgtttta
     9961 ccatttaaca caagagtgga cgcttgcact atcgcttaaa tccttaacat cattgtaaat
    10021 gaaattacgc taagattatt ctctatgaac aaaaattctc tcttttcgat ttggtttacc
    10081 accgctcgcc cgaaaacttt accgctggcg ttagcttcaa ttattgtggg ttcagcactt
    10141 gctcattggg cagggaaatt tgatgttgtt accaccttac tcgcatttat caccaccatt
    10201 ttgttgcaga tcctgtctaa cttcgccaat gattacggcg accacgtcaa aggctctgac
    10261 accaaagaac gaatcggacc gctacgggcg attcaacacg gtgttattgg cggtgaacaa
    10321 cttaagaaag ccgtgattat cttaagccta ctctcgtttg tttccggtgt tgccttaagt
    10381 gcctatgctt ttgaaacagt gcaggatctg tttttcttta tcgggcttgg catcgtctca
    10441 attattgccg ccattactta caccgtcggc aaaaaagcct acggctattt ggggctgggc
    10501 gatctatttg tgctgatttt ctttggcttt gtagcggtaa tcggcgtgtt ctacttgcag
    10561 gctcatagcc tacctataat gattctgctc cctgctttcg gttgcggatt gctgtctgta
    10621 gcagtgttaa atatcaataa cttgcgtgat attaaccaag accgacaagc tgggaaaaac
    10681 actctcattg tacgaatcgg tagccaaaac gggcgaaaat accacgttgc attgttagtg
    10741 ctagcggtca tttcttatct gatttttgca atttctgaat ttgaacattg gtatagcttc
    10801 atttttttgc tgtctgtacc gttactggca aaacacgctc gttttgtcta tcagcataaa
    10861 gacccaaaag aactctaccc aattctaggg caaatggcag ggctggcgtt gctcactaat
    10921 ctattattta gtttgggcat tgtgttaggg taagttgcaa aattttaaca aaactaaacc
    10981 gcttgtaata aaggattaca agcggttgtt ttttatctaa atttacaatt agttatctag
    11041 ttcttcaaag aatccatctt tttcgccacg ttgatactcc gaattgagca acttattaat
    11101 aatgtaccaa tccgcttcaa cctctatatc gccttctgca taagcaccta attcgtatgg
    11161 cggataaaca aaagcaatgc cgtgaggggt aaagtagaat tggtcagaaa tacggaactc
    11221 ttttttatca gcaaatccat tatagttgcc attttcatcc acacgcacgc tactgtaatt
    11281 ttcccaaaga atgtctttca gttgaacttg attttttggg ctgattaaat catttaagcc
    11341 aatgattgct tttttagcta aatctacatt gatatattgc gtatagtgca taccgtgagc
    11401 cccacccata taggtgtaat gcatcatagt gaatgtagca atattattgc gttgcccgat
    11461 aaaagcactg gaaatatgat catcatagcc aatagctggc tcggttttca cactttctac
    11521 caacccttga taaaccgctt cacgatgctt tttaaactct tcttcggttg gatttttcag
    11581 ctttctgcct tgttcttcat tgtaatcata ggcctgatta atcaaaagct ggttaagcca
    11641 atcaaaattg gtttttggta gagacacaaa cgcacttact gtactttctt ctattgcaaa
    11701 ttcttgtttc ggatcaactt ggtgcttaat cacctctttc ttatcaaaga ttttcacaat
    11761 ttcaacattt aacgctgtgt tttgctgagc gttctctaac tctgatttta atttttcatt
    11821 ttctgctttc acccctgaaa gttctgcaac ttcagcctct ttttttgcta aatcagcctg
    11881 agcatttttt aattctgtgc ctaactgaac aatttgtttt tcggcttcta ataccgtttg
    11941 ggtcattttg ccgtcttcac aagctgaaat cagaaatact gagccaatta aaagtgctaa
    12001 tagtgatttt ttcatctctc cctcttttgt aaaaaatacg gtaaatatca ccgcttgtta
    12061 tacagattaa aacaaaatcc cctataccat caggcatagg ggaaatgatt agtcgtctaa
    12121 gaaactgcgt aaggtttccg aacggctcgg gtggcgaagt ttgcgcagtg ctttcgcctc
    12181 aatttggcgg atacgttcac gagttacgtc aaattgttta ccaacttctt cgagtgtgtg
    12241 gtctgtgttc atatcaatac caaaacgcat acgcaacact ttcgcttcac gcggggttaa
    12301 gccctctaac acttcgttcg ttgccatacg caggctctcc gcagtggcgg aatccaatgg
    12361 taattcaagg ctttcgtctt gaatgaaatc acctaaatgt gaatcgtcat cgtcaccgat
    12421 tggtgtttcc attgaaatcg gctctttggc aattttcaat actttgcgga ttttatcttc
    12481 cggcattccc atacgttctg ccagttcttc cggcgttgcc tcacgcccca tttcttgtaa
    12541 acattggcgt gaaatacggt tgagtttgtt gatagtttca atcatatgca ccggaatacg
    12601 aattgtacgg gcttggtcag caatcgaacg ggtaatcgct tgacgaatcc accaagttgc
    12661 ataagtcgag aatttataac cacggcggta ttcaaattta tccaccgctt tcattaaacc
    12721 gatgtttcct tcttggatta aatctaagaa ctgcaagcca cggttagtgt attttttcgc
    12781 aatcgaaatc accaaacgta agttagcttc caccatctct tttttcgcac ggcgggcttt
    12841 taactcacca ttggaaatac gcccgccaat ttcacgaatt tgagcaatgg ttaagcctga
    12901 tgtttgctct aaattctgta agttagcaat attgacacgg atattatcca cataattagc
    12961 taatttcggt gctgcatttt tcttggcatt aatcgctttt tcaatccacg cttcgcttaa
    13021 ttcgtgccct tggaatgctt tcaagaaatc cgcttttttc atgccggcat attccactgc
    13081 atagcgttga atttgacgtt cttcagtgcg aacctgcttc atcagttttt gcatagaagc
    13141 aaccaataag tcaaattgct tcggcaccaa acggaattca cggaaaatat gagataaaat
    13201 ttcaatttgc tctttcgatt ttttactggt tcgcccgtgt ttttgaatga ccaataacac
    13261 tttttcatgt tggctgcgta gggcttcaaa tttttcacgg gcaagttccg ggtcaattga
    13321 gctgtcatca ctgctgtctg aactgctatc accgttttca tcttcgtttt cgtcatctac
    13381 atcaggcaca tcagaagatt cttcatcttc acctaaagca gcctcaatat cctctaacgg
    13441 tgcttcttct aaaatattag gatcgacaaa tgctgtcact aaatcagaaa ggcgcatttc
    13501 accggtttcg acttgagcat agcaggctaa caggccactt aaggcttccg gatattccgc
    13561 aatcgcacat tgaacttcgt taatcccttc ttcaatgcgt ttagcgatat caatctcacc
    13621 ttcacgggtt aaaagctcaa ctgtccccat ctcacgcata tacatacgca cagggtcagt
    13681 agttctacct aactctgatt ctacggttga aagcactttg gtggcttctt ctaccacatc
    13741 ttcatcggcg atattttcag cgagtagtaa atcatccgca tcaggggcag cctctaaaac
    13801 ttggataccc atatcgttga tcatctgaat aatatcttcg atctgctccg catccaccaa
    13861 ctcttccggt aagtggtcgt gcacttcaga aagcgttaaa tatccctgtt cacgcccttg
    13921 actgatcaga agttctaatt gagattgctg ttctaattgt tgatctgctt ggttttccat
    13981 agtctatccg tttattatgc gagcaaaaat agtagtggat tataccacta aatttggttc
    14041 gacttcataa attcacaaaa aaattctatt tttctaattt acacattact ttgatgctta
    14101 tgagaacaga gaggtgtagc aagagagata aataactttc tttttagata gaattaatta
    14161 ttttcttcgt tcatcacttc tgccaaatct cccctaaccc ctctttgcta aagaggggaa
    14221 ttattcgagc ttaaaattct actgaaacat caaaagagca tactcttttt tctcatcatc
    14281 ggttaagccc acggttcggt ctttggcaat tagctcttct ttgcgtaatt ccactaattt
    14341 ggcgtagaga aaatcgagag tgtcaataaa tgttcgttcg atattttcgg gtaactctaa
    14401 atgatcccaa tttgcgaggg cttcaacaat cttatattgg ggatcttccc gataatgttc
    14461 aagtagcccg cccatactga tacctgcatt ttgctgacaa gttgcgacaa tatcggttaa
    14521 taatgtaaag ccaggatctt tcaaggaggc taaagcactt acatcgggta cgaatttcac
    14581 aaaatacgga ttttgaatca ataacgcaat caacagccgc attggcgtac gtttcatttt
    14641 gaccgcttga tgtaaaggct tctctgccgc ttttttcgtc ggtaacagag cttctatctg
    14701 cgttgggtct aaaatgccta atttctgtcc taaaatattg cgtaaataca ctcgcagcat
    14761 ctcgcccgga atacgattaa ttaacggcac agctaaagca gcgagcttgg attttccctc
    14821 ttttgaagag agatccacat ccgccagcaa actgtcaaat aagaaatcgc ttaatggctt
    14881 ggcattctgt gccacgtact gctcaaatcc ttctttacct tgagaacgaa caaaggtgtc
    14941 cgggtcttcg ccatcgggca agaaaataaa tttcagttgg cgaccgtctt gcaaataagg
    15001 caacgcattt tctaacgccc gccaagctgc atctcgaccg gctctatcgc catcataaca
    15061 acagacaatt tgctcggtgc aacgaaacat ttgctgaatt tgttcaccgg tagttgccgt
    15121 gcctaaagag gcgactgcat tgtccacgcc gaattgggca agggcgacca cgtccatata
    15181 gccttccacc acgaacagat aatccggcgt ttcattgact ttcagtgctt gatacaagcc
    15241 atataactca ctgcctttat gataaatcac cgtttcgggc gagttcatat atttcgcccc
    15301 ttgctcatca ttcggcaaca cccgcccacc aaaggcaatt acccgtccac gcttatctcg
    15361 aatcggtaac attacccgat tgcgaaattt atcgtaaatt cgaccgctat catttttggt
    15421 taaaacgccc gtatcgagca atttctgaat atcttcttgt gattgcccaa aagtgcgtag
    15481 ggctgcatca aaggcattcg gagcaaaacc aatttcaaag cgttcgataa tctcttcaga
    15541 caaacctcgt tgctgtaaat agctttgtgg ctcaatctgg tgcgataaat tctgctggta
    15601 gaacttcgcc accgcttcca tcaattcata aagattacgc ttagttttaa aattagcttg
    15661 aggcttgccg tcacgttgaa tcacattctc tctcggtact tccagcccgt gcatagctgc
    15721 cagttcttca atcgcttccg gaaattcgag tttgtcataa tccatcaaaa aggtgatgac
    15781 attgccgtgt acgccacagc cgaaacaatg gtaaaactgt tttgattggc ttaccgaaaa
    15841 ggaaggggtt ttctcgtgat gaaaaggaca gcaggcttga taatctcgcc cagccttttt
    15901 gagtttgacc cgactgttga tgacctcaac aatatcggtg cgagcgataa gatcatcaat
    15961 aaatgaacgt ggaattgtgc ctttcattga tttcctcctg ctctttgaat gatacaagcg
    16021 gagcaatttt gcaaattttt tgcaaaaaac aaccgcttga aatagaaacg ttaaaaacac
    16081 caaaaccgtg agcctaacgg aatcacggtt tcgatatagt ttgctaacca gcctaactaa
    16141 ttagtataaa cgtgtgttac gtgcgttctc acggaaatta cgtttagcgt gacgtttagc
    16201 aagtgatgct ttttcacgtt tacgaattgt agttggtttt tcgtagaatt cacgagcacg
    16261 aacttcagct aagatacccg ctttttcgca agagcgtttg aaacgacgta atgctacgtc
    16321 aaatgattca ttttcacgaa ctttaattac tggcatatgc catcacctca gaaaaatatg
    16381 attaaattaa accgcacaca attttggcgg catagaacaa aaaaggtagt gcattctacc
    16441 ttaagcactc acataagtaa agtagtattg tggcataaaa ccgccgtatt atgttgcatt
    16501 tttctacagt tcgaataatt tctcggtcga aaaacttaat gccggaaaga ccaccgaagt
    16561 tgccggttca tcttctgcca ccggctgaat accgatatat ttaccgtttt ccaacacaaa
    16621 aatctgaata gtgcgggttt cgggagaaac aatccaatac tctttcaccc cttgttcctg
    16681 gtaaagctcg tatttatctt tcatctccct tttggtatta cccggagaaa ggatttccac
    16741 cactaaatcc ggtgccccta cacagcctct ttcatctaac ttactgacat cacaaattac
    16801 acaaagatca ggctgcacta cagttttgac ttttccgttt tcatcgggaa accgaacgtc
    16861 aaaaggcgca gaataaatct ggcattggtg attgtcaaaa acctctaaaa attttgctgt
    16921 catcttcata gaaattcgct gatgaaaacg agtaggagcc ggagacatcg ccacaatttt
    16981 ccctttgata atctcaaccc gctctttaaa tttccatagc aaataatcag cgtaactgta
    17041 acttttttgt aagtccagtt gatttaagct ggtaatttcg ttcattggta ataagctcat
    17101 accgcctcct ttatcagaaa tataaagata ttatgccgaa taatccctca aattcaacaa
    17161 aactttcgct aaaaagagat agataacctt tataccctta gtataaaatg acagcaattt
    17221 tcattgtttt aggatatgtc gatgcacctt aacttcaaaa aaatagacaa ctcacatatt
    17281 gctcttttct ataatgtact agtcgccaca ttttttgtca ctgttttaac ctttaagaaa
    17341 ggttatagtt atgtgccaat ggcattaggt attatcgcta cacttagttt cttattttat
    17401 cgtttcaaat taaaacaaaa gtggttactt gataaagagg ataaattttt tattttctcg
    17461 cttattggct attttctaac gtttgcaatg tctgctattt ttaatggcga tggcattcgt
    17521 gaaattgata atcctatcca gattttattg cttatccctt taatcatcct ctttagactt
    17581 tacccgatta aaaaagaaac tgtattgcac tttataccga ttggagcgtt ggtagctggt
    17641 tgtatagcaa tatatcagag gtttatatta aatcttaaat ttcctttccc tgaaataatg
    17701 cgtattcaat cggggaacat agcaatatta ttatcactat ttagtatagc aattgccttt
    17761 tattggcttt caaaaaaaag aattaaaact ggcattgcct acctggtttt tgccatgttt
    17821 gggttatttg ccagtattct aacaggagca agaggcggct ggcttgcatt cattcccatt
    17881 tgctttttta tcctattttt aaatttaaga cagctaaata agaaagctat tttcctgatt
    17941 ctattagcac ttatatcttc actctcattt tttatctcca aaccagaatt tggcatacaa
    18001 aaacgatata atgcagctaa gaatgatatt atcgtatttt tagaaaaagg aaatagacat
    18061 tcatctctgg gagctcgttt tgatatgtgg gaaaatgcgc ttatcggaat ccgtgaaaaa
    18121 ccgctattag gacacggtag cacaggctat gaaacattca aaaagaaaca gattgaaaca
    18181 aaacaaatgg caaaaacaac gcttaggttt aatagcttac acaaccaata cctagaagcc
    18241 tttgtgaaaa gaggtgtagt tggttttatg gcgctaatgg ctattttaat tattccattt
    18301 gttatttttg ccaaacgatt aaaggcaaaa aatagagagg taaaatgtat ggcgatatta
    18361 ggcattgtac atattatttc gcattcattc tttttcctaa gccaatcatt tttagcccat
    18421 aattcaggct cattattcta tttctttgtg ttaattttac tctaccattt agtcaaacag
    18481 aacgaagaga taatatgata aaacaataga agaaagttgg gaatataacc gaggtggtaa
    18541 cttcatcttc taccacagga taaatgtcgg gatatttcct ctttttctgc ttcttactac
    18601 taattccgat tagccaaata ccattccact gttttacgca agccactttc aaaagtttct
    18661 ttcggtttcc agtcgagttc cttttcgatt tttgaagtat caattgcata gcggaaatcg
    18721 tggccagggc gatcttgcac ataagtaatt aaatcagcat attgtcctac aacaagcggg
    18781 ttatttggca ccatttcttg caaaatagaa cagatagaac gaaccacttc gatattggtt
    18841 ttttcattat gcccgccaat attgtaggtt tctccgattt gccctttttg caacaccaaa
    18901 tagagggcac gaatatgatc ttccacaaac agccaatctc tgacctgcaa gccgttgccg
    18961 taaacaggta gggatttacc ttctaaggca tttaaaatca ttaacggaat aagtttttcg
    19021 ggatattggt atgccccata attattggaa cagttggtga tgacagtcgg taaaccgtag
    19081 gtgcgatgcc aagcccgagc cagatgatcg ctggcagctt tagatgccga ataggggcta
    19141 cttggattat aaggggtttt ctcggtaaat aattcctcgc ttttggctaa atcaccatag
    19201 acctcgtcgg tcgagatatg tagaaagcga aacgccgatt tccttggctc aggtaacgtg
    19261 tcccaatagg ctctcgctgc ctctaataaa gtataagtgc cgacaatatt ggtttgaata
    19321 aaatctgctg ccccagaaat agagcgatca acatggcttt ccgctgctaa gtgcattacc
    19381 acatcaggct gatatttgcc aaaaatctca gaaatttgac cgcttgcaca aatatctgct
    19441 ttttcaaaat ggtagcgttc gtgatgtgcg acactctcca atgaggctaa atttcccgca
    19501 taggtgagct tatccacatt gataactgtg tgtggagtat gttcaatcag atagcgaact
    19561 aatgcagatc cgataaaacc ggctccgcca gtgatgagga tgatcataaa ggtgaatatg
    19621 aaatttgatt cacgaaattt cgtttgtatt taatatggct ttgaatattc ttttcagcgt
    19681 cttttttatc ccaaatttgc aattcccaag gataataaaa gttacttgaa ttcttaaaat
    19741 aaatatgaat acccacatat tcatctttat ctctcaaata ccaatttttt agtccatatt
    19801 tttcttgcca ataatctaat gactccatta cttgctgaat cacttcacta gaaacaataa
    19861 tacgagctcc aaaaatatcg ttgagaatgc tatttactgg ataaccttca ctacgctgtt
    19921 taaaacgctc gattttatct aaaatcgatt ctgaggtttt tactcggtaa aaataagaaa
    19981 ttccctctaa atctgcacga tataaataat cattaataga ttcgtgtaaa ttaagacgat
    20041 aagctaaaat atgtggcgta ggcactttgg caaaagtatg cttaagattc actttttcaa
    20101 tcttacctgt ttcaaagtag tctttcgaaa aagctaagtg caacttgttg atttcatcaa
    20161 tgagtttttc tattttctca agcatgctat tcactctcta atttattatc ttgccccaaa
    20221 tccagttagc attgttttca atgttttaaa aataattaaa atatcaagcc ataaagaaaa
    20281 atgcttaata tagtagaagt catgttctac ttttactttt gtatcatcaa catctgccgc
    20341 ataaccttgg acgacctgag cccaaccgga aatacccggt ttaacgatat ggcgataatt
    20401 atagaatgga atttcctctt caaatttatc tacaaaggct gtctgttctg ggcgaggacc
    20461 aattaagctc atatcacctt ttaatacatt aaaaaactga ggtagctcat caatacgagt
    20521 tttacggata aatttcccaa tacgagttac cctcatatcc gcactcgaag caaactgtgc
    20581 atcatctttt tcggagtctt tacacatact acgaaattta taaatattaa actcctttcc
    20641 accttgccca acgcgttttt gaataaacat tgctccacct tcactttcta agcgaatagc
    20701 aatagcggtg attgtcataa taggtaaagt aatgggaaac gtagcaacaa tcaatgcaat
    20761 atcaatgata cgcttcacta atgagtaaat tggagaagga agtaatgaac ctaagtcatt
    20821 ttcatacata tggcgaattt tgacacgccc ggttaaagat tcctcaagct ggcgaacgtt
    20881 atatacagga ataccattca atgtacattt cgctaaaaat ttatgccatt ctgcggacaa
    20941 atcaggatag tgtaaatcta ccgcaataga gttaattctc ttttccccca atattggttc
    21001 acttaattga atccactcta cattctgaat tcggttcaaa ttgatagctc ttccgaatgg
    21061 aaccaaagcg attttaggga taatccaact tcttgaaaga aaataaccaa taaaacaaaa
    21121 tagaattgtg agtataaagc tcgtacctag caatgtatta gaataatcaa atctaaatat
    21181 tgttaacacg attaataaaa ccgcatacca agaaataacg gtggaaaaaa caaaacttgc
    21241 tgacttatta cctggatatt tcattaacac tcttaagctg atagctatca ttacaaaggc
    21301 aagagaagtc gctataatcg tattagaacg agtttcaata gaattaaatt tctctcccca
    21361 aaaatagata gcgggtaaga cacttgagaa cataacgccc aaaatacttt gaacagctgt
    21421 actaaaaaag atacgttcat accaacgaga gtgtcttttc ttttgctgaa tgctcataat
    21481 ttatcctttt cttaatttct tataaagtct tcctaaaaga gatctaggca ataaccgtgg
    21541 taaggctcta agtataaaaa acatgcttga tgagattatt gattgtaatc ccaactcttt
    21601 tttcaatttt gctaattggt actcactctt aatgtaattc caccctttac gccgagcgta
    21661 cattgcagaa cctgaacgaa catttaccag tacatctggt aaattataca cctcatattt
    21721 ctgtgtaata actcgtaacc ataaattgta atcttccata taaagatgat gctgatagcc
    21781 tccaacatgc tcgatcacag attttttata ggctactgcc atatggttaa aaggatttct
    21841 tagtaatgct gaaatacgaa tttcatcatc attaatgggc acttgtttta tacccagaga
    21901 attagacatt gtttcgtcaa attcttcaac ttgtcccccc aataaaacca catcaggatt
    21961 tttactaata aaatcaattt gcttttcaaa tcgagatggt aagcaaatat catcagtatc
    22021 cattctaaac acccactcat tagagcagtg ttttaagcct tcatttaagg ccggcctaaa
    22081 cccacatttt gtggtaaact aacaacaaca agcggtaatt tttcagtaaa atgttgcaca
    22141 attcgctcta aatctccagg aattatacca tcaaaaacca caacaatttc acttgctggt
    22201 aaagtttggg atactaaaga atctaaacac atctctaaat aagctggttt ttctttataa
    22261 tacaaagata ttaatatcga aaacttcaca actacttttc ccactttt
//
LOCUS       DANLXD010000034        22275 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.034, whole genome shotgun sequence.
ACCESSION   DANLXD010000034 DANLXD010000000
VERSION     DANLXD010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22275
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.034"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(113..1012)
                     /gene="cdd"
                     /locus_tag="PXD18_001062"
     CDS             complement(113..1012)
                     /gene="cdd"
                     /locus_tag="PXD18_001062"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HDL6301506.1"
                     /translation="MFRTDITERFEQLKAAKNCEVTQAIIEQLIKQDFHGQLSYEVVD
                     ELCEKFKRSRVELALYCIAIAACYAVTPVSDFNVGAVAIGKNGDFYFGANQEFSGECM
                     QQSVHAEQSAISHAFLAGETLITDVVVNYTPCGHCRQFMNELNSAASLKVHLPHSQNN
                     LLHSYLPDSFGPKDLGIEKVLFDEQPQQFEVKGDHLQQAAIFAANNAYAPYSNAFSGV
                     ALQVGERIVCGKYTENAAFNPTFLPLQSALNYRLFLGLADIPVTRVVLAEAKGSLSSY
                     AMTQALAKSLFGLEIEYLSLQAV"
     gene            complement(1026..1928)
                     /locus_tag="PXD18_001063"
     CDS             complement(1026..1928)
                     /locus_tag="PXD18_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6301507.1"
                     /translation="MISSSLKLGYFSLIVATLFWGGNFVLGKVLSGAVQPITLTYLRW
                     LPAFLILVLLFFRPTWRVMHLLKPRLGVMWVLGLLGVILFPATLYEGLKTTTALNASL
                     YLAISPVLVLFLNRLVFKEKISPIILSGAIISLLGVLWLLMQGKLTRLFSLAINQGDL
                     WAIASTISWAVYCCVIRLRPQGISNTVFLTVLVGLAVLTLTPFFIYEYVAESAKNLAN
                     LTALQWSGIGYLVIGPSILSYAFWNFGIAIVGSAKGAVMTNFTPLFAAMFSIILLNES
                     VHTYHIISAILITAGILICSYKKH"
     gene            complement(1925..2281)
                     /gene="folB"
                     /locus_tag="PXD18_001064"
     CDS             complement(1925..2281)
                     /gene="folB"
                     /locus_tag="PXD18_001064"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HDL6301508.1"
                     /translation="MSDKVFIRELTAFASIGAYNWEHTIKQRLVFNIDMAWDFSKAAE
                     TDDVQYCLNYAEVSQKVLDFVESQPFKLVETVAYQLAELLQKEYQLSWIRIELHKPKA
                     VAQASSVGVIVERGHQ"
     gene            2351..2956
                     /gene="plsY"
                     /locus_tag="PXD18_001065"
     CDS             2351..2956
                     /gene="plsY"
                     /locus_tag="PXD18_001065"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HDL6301509.1"
                     /translation="MNLIPYLLILTAYLLGSISSAVIFCKLAGLPDPREVGSHNAGAT
                     NVLRIGGKSAALGVLLFDILKGTLPVAMGIYFELSPSQLGFIALAVCLGHIFPIFFQF
                     RGGKGVATAFGAISALSFIVAGGAIGTWLLVFLISGYSSLSAVFTALVVPFYIWWFEP
                     QFTFPVALVCCLLVYRHHDNIQRLWRGQEDKLWDKFKKNRA"
     gene            complement(3030..4937)
                     /gene="parE"
                     /locus_tag="PXD18_001066"
     CDS             complement(3030..4937)
                     /gene="parE"
                     /locus_tag="PXD18_001066"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HDL6301510.1"
                     /translation="MSEKRYGADEITVLKDLEPVQLRPGMYTDTTRPNHLGQEVIDNS
                     VDEALSGFADKIDVILHADNSLEVVDNGRGMPVDIHSTEKISGVELILTKLHAGGKFS
                     NKNYTFSGGLHGVGISVVNALSERVEIQIKRGGEVYSIAFANGVKVEDLTVIGTCPKK
                     QTGTTVRFYPNPKYFDSPRFSVSRLRHLLRAKAVLCPKLTINFIDKINNTEESWYYED
                     GLSDYLSEALNGYETVPNPPFIGDVTAETEAVSWALTWLPEGGELVAESYVNLIPTAQ
                     GGTHVNGLRNGLLKAMVEFCEIHNLLPKGVKLTADDVWNRCAYVLSLKIQEPQFAGQT
                     KERLSSRQASSYVDSTLKDAFSLWLNQNVQTGKLIAEMAISSAQSRMRAAKKVVRKKL
                     VSGPALPGKLADCTAQDLSRTELFLVEGDSAGGSAKQARDKEYQAILPLRGKILNTWE
                     VSSDQVLASQEVHDIAVALGIDPDSDNLEELRYGKVCILADADSDGLHIATLLCALFL
                     RHFPKLVQNGHVYVAMPPLYRIDIGKDEVHYALDEAEKEAILARLAKKKGKPNVQRFK
                     GLGEMNPSQLRETTMEPSTRRLVQLTFDDTVEEGELNTFEIMDMLLGKKRAEDRKQWL
                     QNRGDEADLAV"
     gene            5145..5369
                     /locus_tag="PXD18_001067"
     CDS             5145..5369
                     /locus_tag="PXD18_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HDL6301511.1"
                     /translation="MVVKILKRKSQKTLQQIYTQPISANIKWTNIEALFLELGAEIEE
                     REGSRIAVVLFQQVRVFHRPHPNPDTDKGR"
     gene            5412..5741
                     /locus_tag="PXD18_001068"
     CDS             5412..5741
                     /locus_tag="PXD18_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HDL6301512.1"
                     /translation="MRNIMDINGYKAVIAYDPETELFRGEFIGLNGGADFYADNVIQL
                     KKEGELSLNIFLELCREKGIEPFKQYSGKFNVRLSPELHKAAVIAATAENLSLNEWIN
                     QTLEKSV"
     gene            complement(5780..6166)
                     /gene="cueR"
                     /locus_tag="PXD18_001069"
     CDS             complement(5780..6166)
                     /gene="cueR"
                     /locus_tag="PXD18_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005654127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(I)-responsive transcriptional regulator"
                     /protein_id="HDL6301513.1"
                     /translation="MNISQAAEKTGLSAKQIRDYEKAGLLPPTSRTEAGYRFYNATDL
                     SRLHFISNARKVGFSLAQISELLKLNDNPNRSSRDVKQLTEQHIGELEQKIADLNQML
                     TLLKSWSSSCCGNANSECSILNGLNG"
     gene            6255..6455
                     /locus_tag="PXD18_001070"
     CDS             6255..6455
                     /locus_tag="PXD18_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HDL6301514.1"
                     /translation="MTITLQLDGLHCGNCVKSVEKALNGVAGVNQVSVTLEPQIAVVE
                     GSAEAQALIEAVEDIGFDAKLA"
     gene            6508..8700
                     /locus_tag="PXD18_001071"
     CDS             6508..8700
                     /locus_tag="PXD18_001071"
                     /EC_number="3.6.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HDL6301515.1"
                     /translation="MTSTAHYSPEQQLLIDGMHCAACVRRVEKALLKVEKVEFASVNL
                     ADQTAFVQGNANPEALVAAVVKIGFGAEVLESEEERRIKQQAQTQRVLGHKRTQFMLA
                     LVVGFALVAFGFYKGMTVNETNRSLWLSWAGISLATMYFSGKDFFLGAFSALKNRSAN
                     MDMLVAISTGTAWLYSCWLTLFPQPNAHVYFEASVMILGFINLGKYLELKAKQRSSLA
                     LEKLLDLAPKQAVIFEENIAKTIPAKAIKPQMRVQALTGDRLAVDGILDSGSIWVDES
                     MLTGEALPVEKKIGDKVRAGTLVQDGSGTYIAEQVGSQTALARVINAVRHAQSSKPPL
                     AQFVDKIAAVFVPVVVSIALLSALIWLAVGQDFAFALSIFTTVLIIACPCALGLAIPL
                     STIAGVARSAEFGVLVRNIEALQASSEIDTLVFDKTGTLTTGRMEVSDVLTFNGFEQK
                     RLLQLAKSVEQHASHPIAKAIAKFAENQTACGVTDVQVLKGLGISAKYEGSTIRMGNW
                     QFVGETIQANLASLLPAKEGDFSSKIFVSVDNQLAGVLSVSDQLRPEAKATIHQFQAE
                     GYQCVMLTGDRQQTADYFANALGLDGVIAEVLPEQKAEKIRALQAEGKKVAMIGDGIN
                     DAPALAQANVGIAMHNGSDIAVETADLSLMREGLAPLMQILPFSKKVLKNMKQSLLGA
                     FIYNVIAIPIAAGVLYPFTGWLLNPMIAAIAMTLSSITVVLNSQRLLK"
     gene            complement(8753..9538)
                     /gene="truA"
                     /locus_tag="PXD18_001072"
     CDS             complement(8753..9538)
                     /gene="truA"
                     /locus_tag="PXD18_001072"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HDL6301516.1"
                     /translation="MKIALGIEYDGSRYFGWQRQEAVESVQQQLEQALSVVANSPVEV
                     FCAGRTDAGVHGTGQVVHFETQANRPLQSWCFGTNAHLPDDIAVKWAVAVNEDFHARF
                     SATARRYRYIIFNQKLRSAILPKGVTHFHFPLDERKMHQAGQYLLGENDFSSFRAAKC
                     QSNTPWRNIHHLNVSRQGNYVIVDIQANAFVHHMVRNIVGTLLEIGQGRQPVEWAKWV
                     LEQRDREKAAPTAKAEGLYLVEVHYPEHFGIPKTPLGPLFLAD"
     gene            complement(9603..10292)
                     /gene="folE"
                     /locus_tag="PXD18_001073"
     CDS             complement(9603..10292)
                     /gene="folE"
                     /locus_tag="PXD18_001073"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HDL6301517.1"
                     /translation="MTTISPELTITENTLSPEAQKVRQALLAKGIETPTVTHTKDKAS
                     RRAEIQQHMQAVLELLGLDLSDDSLEETPHRLAKMYVDEIFSGLDYATFPKITNIENR
                     MKVSEMVLVDDITLTSTCEHHFVTIDGKVAVAYYPKKWVIGLSKINRVVQFFAQRPQV
                     QERFTEQILTAFQTILETDDVAVYVKATHFCVKCRGIKDTNSYTVTSAFGGVFLEDRE
                     TRKEFLGLLNK"
     gene            10393..11100
                     /locus_tag="PXD18_001074"
     CDS             10393..11100
                     /locus_tag="PXD18_001074"
                     /EC_number="2.7.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid kinase"
                     /protein_id="HDL6301518.1"
                     /translation="MQNIQYLFNADLIPEHQAEFVQSLLTCKNFDNSDRLLGFSKGRG
                     TTWFLDTSAELGINVVLRHYYRGGLFGKIIKDSYFFTRFEATRAYKEFFLLQQMLAWG
                     LPVPRPVAIKIERHFCCYRADIMLEKLENTQDLSKILQSHSLSNEQYEQIGKLIRSLH
                     NHQIHHSDLNIHNILLGNDGKFCLIDFDKCGIEPGENWKQNNLDRLLRSFKKEQGRLN
                     IFFSEENWQAVLRGYTL"
     gene            complement(11155..12252)
                     /gene="apbC"
                     /locus_tag="PXD18_001075"
     CDS             complement(11155..12252)
                     /gene="apbC"
                     /locus_tag="PXD18_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HDL6301519.1"
                     /translation="MNQLNEQQLVEIKAILQQFSHPTLQKDLIALNAFKKAELGGDIL
                     RIEITMPFAWNSGFETLKAETEAKLKQVTGSSGVKWVLNYQIATLKRANKHPAVNGVK
                     NIIAVTSGKGGVGKSTTSVNLALALRAQGTRVGILDADIYGPSIPHMLGAKDQRPTSP
                     DNKHITPITAHGLQSNSIGYLMEEDNATIWRGPMASSALSQLLNETWWNELDYLVIDM
                     PPGTGDIQLTLSQQIPVTGAVVVTTPQDIALLDAIKGISMFEKVSVPVLGVIENMSMH
                     ICSNCGHHEAIFGTGGAEKIAQKYGTKVLAQLPLHIRLREDLDSGVPTVVAAPEHEIS
                     QAYLALAEKVASELYWQGSVIPSEIMIREVK"
     gene            complement(12249..13796)
                     /locus_tag="PXD18_001076"
     CDS             complement(12249..13796)
                     /locus_tag="PXD18_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL6301520.1"
                     /translation="MLKSLQAVTFVKKIAKVTACILLITSCDQLICPQSIQSVWVENR
                     QSDTLLKRAIYSAVFQLDPHKIKASADAAPLRDLLVGLTAYNRKGDVVPAIAQNWFTE
                     DEKEWLFILDEKAVWSNGQPVTAQDFVASWRRLIDPQNHSVLSKYLIYMGIENAKAIE
                     EQIKSVEELGVEALNAHTLRIRLNHPNHQLPEMLAHSALLPTYQGIAPTIDNFVSNAS
                     YRLEKLDAQKMVLKARTQEIPFQTIEYDLITTIQNCSAFDIVENPLLNKKTNIVKFPR
                     LCSYYYEFNFDDPLLAKREIREAIRTMVASANSGQEYGVPSQSVIPHSLVKDREKRWN
                     PVVVEQLLTKAGISPYNPLKLTLLYDENSINIANQVTRALSQSELFNITPKMVDWQTL
                     NKVREQKDYQIARAGWCADYPDPIVFLQKFHSMSPDNHSGYKSEIVDQKLNRLQTETL
                     SAEARESLIQEISEQLYSDVAVLPLFQYHHRVGIVSSLLGIDLNNDSEVIYSKDLKRN
                     LANKDNQ"
     gene            complement(13822..14472)
                     /locus_tag="PXD18_001077"
     CDS             complement(13822..14472)
                     /locus_tag="PXD18_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchE family NAAT transporter"
                     /protein_id="HDL6301521.1"
                     /translation="MDIIINFAIYLQFFIGLFAIVNPFGSLPIFFSMTAHQYEGERNR
                     TSLITAVSIGVILLVSLYFGNLILNAFSISLSSFRVAGGILIVSIAMTMISGKLGEHK
                     QNKEEKNEDITEYENIGVVPLAMPIMAGPGAIGSTIVWGTRYHTWEDYVGFSIAIIVF
                     ALICYILFRYSAPLVKKLGKTGSNVVTRIMGLILMALGIEIIVAGITTLFPVLLVK"
     gene            complement(14594..16465)
                     /locus_tag="PXD18_001078"
     CDS             complement(14594..16465)
                     /locus_tag="PXD18_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HDL6301522.1"
                     /translation="MIEKMHERTNGPVFKIIFALVSISFVIGGIGTGLISQDNSVAKV
                     NGEEISQQLFNNTLNREQNRLNAELGSRFWDLMDSPEYAAQFNQSVLNGLIDEELLRQ
                     YAKELKLGISADQIKSEIVNSQMFQQDGKFSNELYQQTLRHNNLSADGYAAIVQEGML
                     QSQLQEGIINSDFNVPAQQALLAKLLLQQREVRLAEFSVAKEMENQTASEQELRAYYE
                     ANKTKLLAPEKLAVEYVTLSPKDVESKVEITNEQIQTYYDRNKADYVTKGEAHLAHIQ
                     VASEAEAQAIEQALKNGEDFATLAKNKSSDTLSANNGGDLGWAKAGTFPKAFEDAVAN
                     LTAGQMSAAVKVDNAYHIIKVLERKPEQVIELAQVKDKIAQTIRQELVLTEYFTVARE
                     MANKAFENNSSLEEVAKAGNVELQKTDLFTRENVPTALQNEKVLKVLFEGELRQNKQN
                     SDALDVGNDANPQTLFVRVSDYDAERPQTFDEAKAAVENFVKAEKAEKALLAKVEENV
                     KALNEGKSVDVKFNAPQTLVYMQAEVENPVLAGTIFAMKKAQDKTTYQMARNQKGDVV
                     IVALDNITEGNAEQFKTLAPQFEQANRLILRNEFLQSLRAKASIEVNEDFMQQRSSH"
     gene            16647..16916
                     /gene="rpsO"
                     /locus_tag="PXD18_001079"
     CDS             16647..16916
                     /gene="rpsO"
                     /locus_tag="PXD18_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HDL6301523.1"
                     /translation="MSLSVEAKAKIVAEFGRDAKDTGSSEVQIALLTAQINHLQAHFA
                     EHKKDHHGRRGLLRMVSRRRKLLDYLKRTDLAKYSETIARLGLRR"
     gene            16988..17857
                     /locus_tag="PXD18_001080"
     CDS             16988..17857
                     /locus_tag="PXD18_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
                     /protein_id="HDL6301524.1"
                     /translation="MAFASLFTLLDDIAAVLDDVSIMTKVAAKKTAGVIGDDLALNAN
                     QVSGKNVVPERELPIVWAVAKGSLINKVILIPLALLLSVFLPQAIIPLLMIGGAYLCF
                     EGVEKLLHRLLHKNNQAHSDETETLSEKDKIKGAIRTDFILSAEIIIIALGVLQDSST
                     LTQILSLSAIGVGITLFVYGLVGLIVKLDDIGLWLMQKKSTFSQAVGKGLLFAMPWFM
                     KGLSVIGTIAMFLVGGGIFTHNLPMIHHFVEQFGISPHFSTLVDFAVGIVVGIIACLI
                     ILPLMKLFSKKAH"
     gene            complement(17947..19212)
                     /locus_tag="PXD18_001081"
     CDS             complement(17947..19212)
                     /locus_tag="PXD18_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HDL6301525.1"
                     /translation="MFRTLFLMLLLLVGLISGPYLAGNQGYVRIETATTVIEMSIVML
                     VVFFVLAMAVVYLLEWIVTKICRMSNGAYNWFSTRKHKKAQQETLEGLMRMSEGNYSK
                     AEKLFSKNAKHADEPVLNLIKAAEAAQQNGDDLAANKYLIKATEIAGPNNVAVELVRT
                     RILLQQGKLPAARTAIDSLLELAPHSDEVLRLAIQIYKESRAYVALDRLLVEIGQRNF
                     LTAEEYAELEYFVDDGLQDERLQEEGQEGLLSWWENQPNRRRKSVYSRVGVIKRLIDS
                     DDHQSAQEIALETLKKFEDEQLQGLFVQLTRLQIDSDSKLLKVLAKRADKANVKYTDD
                     YARALGYIYTRDGQYQKAKSQFELLLAHDECVADDRIMALHVAEQMGDTLMANRIREE
                     NLKQVNMATQSKVNEPLALPQTATESNSL"
     gene            complement(19231..20541)
                     /locus_tag="PXD18_001082"
     CDS             complement(19231..20541)
                     /locus_tag="PXD18_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HDL6301526.1"
                     /translation="MSRSKKVTEHLEHSAEKVVEEAQQAVDSAGSFAKKEIEEDVVNE
                     AIEKDIQTEMQKAPKEQVVVQKSGGKGLALVALLVALAVGGAGHYMANKKFAEVESQI
                     QAVSAKANQPTTQTMVEMPNFENEKAQIAELVTEYQKALERIKALETAQNGYTQQISS
                     LQLQLQKLNNTSGSDNTFWLLSEADFLLNNAARKVVLDNDIETAKNLLLEADQVLSKA
                     PNTIHIREAIKTDLNTLTALHQIDQNALMQRVANLANKLDDLPILESEQASNSKQDGQ
                     VSDSLADWEKNLEKSAASFLDHFIRVSKRNAADEKAFVAPNQEIYLRENIRLRLQIAI
                     LAVPRQQSELYKKSLQTVGSWVRSYFETSNENVQHFLKELDELAEQTIYVDAPTSLQS
                     LKVIAQQLNKTPEKIEKVEIKAEKELEQAEPVKAEQDAMPLSAQ"
     gene            complement(20553..21317)
                     /locus_tag="PXD18_001083"
     CDS             complement(20553..21317)
                     /locus_tag="PXD18_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HDL6301527.1"
                     /translation="MNVLVTRLDSRGQELVDMLNEQQIFAIHQPLFTIEAGKELPLLP
                     SAISRLKSDDYVFVVSPNAVDYAAKTLVDTGFHFRSDLKYFAVGQRTAKYLTEKAEQA
                     VIYPIEFENSEGVLALPEMQNLTDKTILILRADSGRELLAETAVLRGATIQYLECYRR
                     EPVTDDIPEKISLCKRLGVDTIVITSSEILRSLYEQAKADCRAWLFECDLVVVSRRIA
                     KIAKQMGWQEDKIRVSDKADNVTLMNTLLFKVGKSN"
     gene            complement(21317..22252)
                     /gene="hemC"
                     /locus_tag="PXD18_001084"
     CDS             complement(21317..22252)
                     /gene="hemC"
                     /locus_tag="PXD18_001084"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HDL6301528.1"
                     /translation="MKDILRIATRQSPLALWQANFVKSELEKHFPQLSVELVTMVTKG
                     DIILDTPLAKIGGKGLFVKELELALLENRADIAVHSMKDVPMSFPEGLGLAVICERED
                     PRDAFVSNNYHSLEDLPKGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDN
                     GEYDAIILASAGLIRLGLQERIRSYISVEQSLPAAGQGAVGIETRANDERILNYIAKL
                     NHSSTACCVMAERAMNTRLQGGCQVPIGGYATLEGDELTLNALVGSLDGSQIIRASAK
                     GHKQEAEQLGILVAEQLLAQGADKILAAVYNENVQ"
BASE COUNT         6378 a         4915 c         4176 g         6806 t
ORIGIN      
        1 aaaacgatat aggcaaatat aattgttgca aaagtgtgaa gctcatcaaa aaatttaaca
       61 ctaaaaaata aattgcttaa agatacagca cctttgcaaa aataaatcaa aattacaccg
      121 cttgtagcga aaggtattca atctctaacc caaatagtga ttttgccaat gcttgagtca
      181 ttgcataact actgagagag cctttcgcct cagccagcac aactcgagta acgggaatat
      241 cggcaagccc taaaaataat cgatagttca acgcgctttg caacggtaaa aaagtaggat
      301 taaaagctgc attctcagta tatttaccac aaacaatacg ctcacctact tgcagtgcaa
      361 ccccactaaa tgcgttgctg taaggggcat aagcattatt ggcagcaaaa attgccgctt
      421 gttgtaaatg atcgccctta acctcaaatt gttgcggttg ttcatcaaat aagactttct
      481 caatccctaa atctttcggt ccaaaactat ccggcaaata gctatggagc aaattatttt
      541 ggctatgcgg taaatgtact tttaagcttg ccgcactgtt taattcattc ataaattggc
      601 ggcaatgccc acaaggggta tagttcacaa ccacatctgt tatcaaagtt tcccctgcta
      661 aaaatgcgtg cgagattgca ctttgctctg cgtgaacgga ttgttgcata cattccccgg
      721 aaaactcttg gtttgcccca aaatagaaat ctccgttttt gccaatcgca accgccccta
      781 cattaaaatc ggaaactggt gtaaccgcat aacaggcagc aatggcaatg caatataaag
      841 ccaactcaac acgagagcgt ttaaattttt cacagagttc atcaaccact tcgtaagaga
      901 gctgcccgtg aaaatcttgc ttgataagtt gctcaataat agcttgtgta acttcacagt
      961 ttttcgctgc ttttaattgt tcaaaacgct ctgtaatgtc tgttcgaaac atactgtacc
     1021 tccgtttaat gttttttata gctgcaaatc agtatccctg ccgtaatcag tatggcacta
     1081 ataatatggt aagtatgaac tgattcattt aataaaataa tactgaacat tgctgcaaag
     1141 agcggcgtaa aattagtcat taccgctcct ttagcagaac cgactattgc aatgccgaaa
     1201 ttccaaaacg cataagagag aatagaaggg ccgataacca aatagcctat cccactccat
     1261 tgtaaagcgg tcaaatttgc taaatttttt gcagattctg ctacatattc atagataaaa
     1321 aatggcgtta acgttagaac tgccagcccc actaatacgg tcaaaaacac cgtattgctt
     1381 ataccttgtg gacgtagccg aatcacacaa caataaaccg cccagcttat agtagaagca
     1441 atcgcccata aatcaccttg attaattgcc aagctgaata agcgagttag cttcccttgc
     1501 atcaatagcc acagcactcc cagcaaactg attattgccc cacttagaat aatcgggctg
     1561 attttctcct taaaaacgag ccgatttaaa aatagcacca atacaggcga aatagctaaa
     1621 tagagactcg cattcaatgc tgttgtcgtt tttaaacctt catataaggt agccgggaat
     1681 aaaattaccc caagcagacc taatacccac atcacaccta aacgaggttt taataagtgc
     1741 attacccgcc aagttgggcg aaaaaagagc aaaactaaaa ttaaaaaagc cggcaaccaa
     1801 cgcaaatagg ttaaggtaat aggctgaact gccccactta acactttgcc taatacaaaa
     1861 ttcccacccc aaaaaagagt agcaacgatt aaactgaaat accccaattt cagtgatgat
     1921 gagatcattg atgacctcgt tctacaatca cacctacact gcttgcttgg gcaaccgctt
     1981 tcggcttatg cagttcaatc cgaatccaag aaagttgata ctctttttgt aatagttccg
     2041 ccagttgata ggcaacagtt tcaactaatt tgaaaggttg agattcaaca aaatccagca
     2101 ctttttgcga tacttccgca taattcaagc aatattgtac atcatcggtt tctgccgctt
     2161 tggaaaaatc ccacgccata tcaatgttaa aaaccaagcg ttgcttaatc gtatgctccc
     2221 aattgtaagc cccaatggaa gcaaaagcgg ttagttctcg aataaaaacc ttatcactca
     2281 tttttcgtcc tgttttattt tctgaatttc tgtaaaatat agcacaagat aaatttaatc
     2341 aggaaaattt atgaatttaa ttccctattt attgatctta accgcctatt tgctcggctc
     2401 gatttccagt gcggtcattt tttgtaagct ggcaggcttg cctgacccaa gagaagtcgg
     2461 ctcacacaat gccggtgcaa cgaacgtact acgaattggc ggtaaaagtg ccgcattagg
     2521 tgtgctttta ttcgatattt taaaaggcac attaccggtg gcgatgggga tttattttga
     2581 actctctccc tcacaactcg gtttcatcgc cttagcggtt tgtcttgggc atattttccc
     2641 gattttcttc caattccgtg gcggaaaagg cgttgccacc gcatttggtg caatctccgc
     2701 attaagcttt attgttgcag gcggtgctat cggcacttgg ctactggtgt ttttaatctc
     2761 cggctattct tctttaagtg ccgtcttcac tgccttggtc gtaccgtttt acatttggtg
     2821 gttcgagcca caatttactt tccccgtcgc cttagtttgt tgcctattgg tttaccgcca
     2881 tcacgataat attcaacgct tatggcgtgg gcaggaagac aaactgtggg ataaattcaa
     2941 gaaaaataga gcataaaaat aggcatagtg aaccgttcgc tatgcctatt tgcaaattat
     3001 tgcggaaaaa tcaccgcttg tcttctcgac taaaccgcta aatctgcttc atctcctcga
     3061 ttttgtagcc attgtttacg atcttccgct cgttttttac ccaatagcat atccataatt
     3121 tcaaaggtat tcaattcgcc ctcttctacc gtgtcatcaa aggttaattg tactaagcgg
     3181 cgagtgcttg gctccatcgt agtttcacgc aactggctcg ggttcatttc gcctaagcct
     3241 ttaaagcgtt gcacatttgg ctttcctttt ttcttggcaa ggcgagctaa aatcgcctct
     3301 ttttccgcct catctaaggc ataatgcacc tcatctttgc cgatatcaat gcgataaagt
     3361 ggtggcattg ccacataaac gtgtccgttt tgcaccaatt tcgggaaatg acgaaggaat
     3421 aacgcacaca gcaaggtggc aatatgcaaa ccgtctgaat ccgcatcggc aagaatacaa
     3481 actttgccat aacgcaactc ttctaaatta tcgctatcag ggtcaattcc caaggctacc
     3541 gcaatatcgt gtacttcttg tgaagccaat acttggtctg atgaaacctc ccaagtgttt
     3601 aaaatcttac cacgcagtgg caaaatggct tgatactctt tatctcgagc ttgttttgcc
     3661 gaaccgccgg cagaatcacc ttctaccaag aaaagttcgg tacggctgag atcttgagct
     3721 gtacaatccg ccagtttgcc cggtaaagcc ggaccactca ccaatttctt acgcaccact
     3781 tttttcgccg cacgcatacg gctctgggcg gaactaattg ccatttcagc aattaattta
     3841 cctgtctgca cattttggtt aagccataaa ctaaaggcat ctttcaaggt gctatccaca
     3901 tagcttgagg cttgacggga agacaaacgc tctttggtct gccctgcaaa ttgtggctct
     3961 tgaattttca gagaaagcac ataagcacaa cggttccaca catcatcagc ggttaatttt
     4021 acccctttcg gcaataaatt atggatttcg caaaactcca ccatcgcctt taataaaccg
     4081 ttacgcaagc cattaacgtg cgtgccgcct tgtgcggtcg gaatcaggtt cacatagctt
     4141 tccgctacta actcgccccc ttccggcaac caagttaatg cccagcttac cgcctctgtt
     4201 tcagcagtaa catcaccaat aaacggtgga ttcggcacgg tttcataacc gtttaatgcc
     4261 tcgctcaaat aatcagataa gccgtcttcg taataccaac tttcttcggt attgttgatt
     4321 ttatcaataa aattgatggt gagtttcggg caaagcaccg ctttggctcg taacaaatgg
     4381 cgtaaacgac tcaccgaaaa acgagggcta tcaaaatatt ttgggttcgg gtaaaaacgc
     4441 actgtcgtgc cggtctgttt tttcgggcaa gtaccaatta ccgtcagatc ttccactttt
     4501 accccgttgg caaaggcaat cgaatagact tctccgccac gtttaatctg aatttcaacc
     4561 cgttcggaca gggcatttac caccgaaatc cccaccccgt gcaaaccacc ggaaaacgta
     4621 tagtttttat tggaaaattt accgccggcg tgcaatttcg ttaagataag ctccacccct
     4681 gaaattttct cggtggaatg aatatcgacc ggcattcccc gcccgttatc caccacttcc
     4741 aacgaattat cagcatgaag aatcacatca attttatctg caaagccgga caacgcctca
     4801 tcgacactat tatcaatcac ctcctgcccc aaatggtttg gacgtgtggt atccgtgtac
     4861 attcccgggc gaagctgcac cggctcgagg tctttcagaa cggtaatttc atccgcccca
     4921 tagcgttttt cagacattat gctttctctt aggcttaaaa taaaataagg ctgaatttta
     4981 aggaatattc agctattttg caaaattttg gtgaaaaatg acctgttgtt atgcaataaa
     5041 aactattttt gcgatctaca tcgaaaaaat gagttttaat ttccctattt gcttattcat
     5101 tcagtatctt aatctcactt tttattttaa aatggtacta tattatggta gtaaaaatcc
     5161 taaagcggaa atctcaaaag acactacaac aaatctacac ccagcctatt tctgccaata
     5221 ttaaatggac aaatatagaa gctctttttc tagagttagg agcagaaata gaagaacgag
     5281 aagggagcag aattgcagtt gttttatttc aacaggtcag agtatttcat cgcccacacc
     5341 cgaatcctga tacagataag gggcggtagc gagtattaaa aaatggttat ctgaaaacgg
     5401 agtcattcct tatgcgtaat attatggata ttaatggtta taaagctgtc attgcttacg
     5461 atcccgaaac agaattattt cgaggtgaat ttatcggatt aaatggtgga gccgattttt
     5521 atgccgataa tgtcattcaa ttaaaaaaag aaggtgaact aagtttgaat atctttttag
     5581 aactttgtag agaaaaaggt attgagccgt tcaaacaata ttccggaaag tttaatgttc
     5641 gcctttcgcc tgaattacat aaagctgcgg taattgcagc aactgctgaa aatttaagct
     5701 taaatgaatg gattaaccaa acgttagaaa agagcgtgta gcctaattgc aaaacaatca
     5761 cctattttga ccgcttgtat tacccgttta acccattcaa tatcgaacac tccgaattgg
     5821 cgttgccaca gcaagagcta ctccagcttt tgagcaaagt cagcatttgg tttaaatcgg
     5881 caattttttg ttcaagctca ccgatatgct gttcggttaa ttgttttaca tctcggcttg
     5941 agcggtttgg gttgtcgttt aatttaagta gttcgctgat ttgagccagc gaaaagccca
     6001 cttttcgggc attgctgata aaatgtaatc ggctcaaatc agtagcattg tagaatcgat
     6061 accccgcttc ggtgcgactt gtcggcggca gaagtcctgc tttttcataa tctcggattt
     6121 gtttggcgga aagcccggtt ttttctgcgg cttggctaat attcattata atcctctcac
     6181 tttaatcgct tgaccttaac ctaaggttaa gctttattat acgcctgaat aatcactcaa
     6241 aacaggagaa aatgatgaca attaccctac aacttgatgg cttacattgt ggcaactgtg
     6301 tgaaaagtgt cgaaaaagcg ttaaatggcg tggctggggt gaaccaagtt agcgtaacgt
     6361 tagaaccgca aattgctgtg gtggaaggct cagcagaagc acaagcctta attgaagcgg
     6421 ttgaagacat tggctttgac gcaaaattag cctaattaat aaggggcaga aattttgccc
     6481 taatctgccc aatatttcgg aggataaatg acaagcacag ctcactattc gccagaacaa
     6541 caacttttga ttgatggaat gcactgtgcc gcctgtgttc ggcgagtgga aaaagcctta
     6601 cttaaagtgg aaaaggtgga atttgcctca gtcaatcttg ccgatcaaac cgcttttgtg
     6661 caaggcaacg ccaaccctga agccttggta gcagcggtag ttaaaatcgg ttttggggca
     6721 gaagtgctgg aaagcgagga agaacgccga attaaacaac aagcccaaac gcaacgagtg
     6781 ttagggcata aacgcactca atttatgctt gcccttgtag ttggttttgc cttagttgct
     6841 tttgggttct acaaaggaat gacggtaaac gaaaccaatc gttcgctttg gctcagctgg
     6901 gcaggtatta gccttgcgac aatgtatttt tcaggtaaag atttctttct tggggcattt
     6961 tcagcactga aaaaccgctc agccaatatg gacatgttag tagcaatcag caccggcacg
     7021 gcttggctct attcttgttg gctcacgctt ttcccacaac cgaatgctca cgtttatttt
     7081 gaagccagcg tgatgattct cggctttatc aatctaggaa aatacttaga actgaaagcc
     7141 aaacagcgtt cctcgctagc attggaaaaa ttgctggatc tcgccccaaa acaagcggtc
     7201 atttttgaag aaaatattgc aaaaaccatt ccggctaaag caattaagcc acaaatgcgg
     7261 gtgcaagcct taaccggtga ccgcttggcg gttgatggta ttttagacag tggctctatt
     7321 tgggttgatg aatcaatgct caccggtgaa gccctacctg tagagaaaaa aatcggtgat
     7381 aaagtgcgag ccggcactct ggtgcaagac ggttcaggca cttacattgc cgaacaggtc
     7441 ggctcacaaa ccgctttggc tcgtgtaatc aatgccgttc gccacgccca aagcagcaaa
     7501 ccgccattgg cacagtttgt agataaaatc gccgctgttt ttgtgccggt ggtggtttca
     7561 atcgcattac tttctgcgtt aatttggctg gcagttgggc aggattttgc ctttgcactc
     7621 tcgattttta ctaccgtgtt gatcatcgct tgcccttgtg cattggggct ggcaattccg
     7681 ctttctacca ttgccggcgt ggcacgttct gccgaatttg gcgtgctggt gcgaaatatt
     7741 gaggcactac aagcaagcag tgaaatcgac accctagtgt tcgataaaac cggcacactc
     7801 accactggca gaatggaagt gtcggatgtt ctcaccttta acggatttga gcaaaagcgc
     7861 ttgctacaac ttgctaaaag tgtagagcaa cacgcctcac acccgattgc gaaagcgatt
     7921 gcaaaatttg ccgaaaatca gaccgcttgt ggtgtaaccg atgtgcaagt gttgaaaggg
     7981 ttaggcattt cagcaaaata tgaaggcagt acaatcagaa tgggaaattg gcaatttgta
     8041 ggcgaaacca ttcaagcaaa tcttgcctcc ctattgcccg ctaaagaggg ggatttttcc
     8101 tcaaaaattt ttgtttcggt ggataatcaa ctcgccggtg tattgtcggt ttcagaccaa
     8161 cttcgccctg aagcgaaagc aaccattcat caattccaag cggaaggcta tcaatgcgtg
     8221 atgctgaccg gtgatcgcca acaaactgcc gactatttcg ccaacgcatt ggggttagac
     8281 ggcgtgattg cggaggtatt accggagcaa aaagcggaaa aaattcgagc cttgcaagca
     8341 gagggtaaaa aagtagcaat gattggcgac ggcataaacg atgctccagc tctggctcaa
     8401 gccaatgtgg gcattgcgat gcacaatggt tcagatattg cagtggaaac cgccgatctt
     8461 tcgctgatgc gagaagggct agcaccactg atgcaaattc taccgttctc taaaaaagtg
     8521 ctgaaaaata tgaagcaaag tttgctcggg gcttttatct ataatgttat tgcgattcct
     8581 attgctgccg gcgtgcttta ccctttcacc ggctggctac tcaacccaat gattgccgcc
     8641 attgcgatga cattgtcgtc aattaccgtg gtgttaaata gtcaaaggtt gttgaaataa
     8701 tttaagcggt caaatttgca tatttttttg caaatttgac cgcttgtaat cactaatccg
     8761 ccaaaaacag cggcccaaga ggtgttttcg gaatgccaaa atgctcaggg taatgcacct
     8821 cgaccaaata tagcccctcg gctttcgctg taggggcagc tttttcccgg tcacgttgct
     8881 ccaacaccca ttttgcccat tccacaggct gtctgccttg cccgatttcg agcaatgttc
     8941 ccacaatatt gcgaaccata tgatgtacaa aggcgttggc ttgaatatca acaatcacat
     9001 aattgccttg ccgagacaca tttaaatgat gaatattccg ccacggcgta ttagattggc
     9061 atttggcggc acggaaagag gaaaagtcat tctcgcccag caaatactgc cctgcttggt
     9121 gcattttgcg ttcatcaagg ggaaagtgaa agtgggtaac acctttaggt aaaattgccg
     9181 accgcagttt ttggttaaaa ataatatagc ggtaacggcg ggcggtggca ctaaaacggg
     9241 cgtgaaaatc ctcattcacc gctaccgccc atttcaccgc aatatcatcg ggtaaatgag
     9301 cgttagtgcc gaaacaccag ctttgtagcg ggcggtttgc ttgcgtttca aaatgcacga
     9361 cctgccctgt gccgtgcaca ccggcatcgg ttctgccggc acaaaacact tctacgggcg
     9421 aattggcaac aaccgacaac gcctgctcta gctgttgttg tacactctct accgcttctt
     9481 gtcgttgcca gccaaaataa cggctgccgt catattcaat acctaatgcg attttcattt
     9541 taataccttg ataaaaagag gggcgaaaaa tttttcgccc ccacagtaat tgatatttgc
     9601 aattatttat tcaataagcc taaaaattct ttgcgggttt ctcggtcttc taagaaaaca
     9661 ccgccaaagg cagaagtaac tgtatagcta ttggtgtctt ttatgccacg gcatttcacg
     9721 caaaaatggg tggctttcac atacaccgca acatcgtctg tttctaaaat agtttgaaag
     9781 gcagttaaaa tctgttcggt aaaacgctct tgcacctgcg gacgttgggc aaaaaactgc
     9841 acgacacggt tgattttcga gagtccaatc acccattttt tcgggtaata ggctaccgct
     9901 actttgccgt caatagtaac aaaatgatgc tcacaggtag aagttaaagt aatatcgtcc
     9961 accagcacca tttcactgac tttcattcgg ttttcaatat tggtaatttt cgggaaggta
    10021 gcataatcaa gcccgctgaa aatttcatca acatacattt tcgccaaacg atgaggcgtt
    10081 tcttctaagc tgtcatcact taaatctaaa ccgagcaatt ctaaaactgc ctgcatatgc
    10141 tgctggattt ctgctcggcg actggcttta tctttggtat gagtaacagt cggagtttca
    10201 atgccttttg ccaacaaggc ttggcgaact ttttgagcct ccggcgaaag cgtgttttct
    10261 gtgatagtta attcgggcga gatcgttgtc attggttttc ctctcaaatg taagctgaag
    10321 attctaacaa attgacatca aaaaaaatag ctctaaaatg agctatttca gccataaaca
    10381 ccctctttat ttatgcaaaa tatacagtat ctctttaatg ccgacctgat tcccgaacat
    10441 caagctgaat ttgtgcagtc tctcttaact tgcaaaaatt ttgacaattc cgaccgcttg
    10501 ctaggcttct caaaagggcg aggtacgact tggtttttag atacctctgc tgaactaggt
    10561 atcaatgtgg tgcttcgcca ttattatcgt ggcggcttgt tcggtaaaat catcaaagat
    10621 agttactttt ttactcgctt tgaggccacc cgagcgtata aagaattttt cttactgcaa
    10681 caaatgttag cttggggttt acctgtgcct cgccctgtgg cgattaaaat agaaagacat
    10741 ttttgttgct atcgtgccga cattatgctc gaaaagctag aaaacacaca agatttaagc
    10801 aaaatcttgc aatcccattc tttatcgaac gaacaatatg agcagatagg gaaactgatt
    10861 cgcagtctgc ataaccatca aattcaccat tccgacttaa atatccataa tattttgctt
    10921 ggtaatgatg gcaaattttg tctgattgat tttgataaat gcggcattga gccgggcgaa
    10981 aattggaagc aaaataacct agaccgcctg ttacgctcgt ttaagaaaga acaagggcga
    11041 ttaaatattt tcttcagcga agaaaattgg caggctgttt tgagaggata tactctctaa
    11101 gaaacaataa tggcacaagc ttagaaactt gtgccatcaa atcatcaata ttaactactt
    11161 cacttcacga atcataattt cagacggaat cacactgcct tgccagtaaa gttcagaagc
    11221 tactttttcc gctaatgcga ggtaggcttg gctgatttcg tgttccggag ctgccaccac
    11281 cgttggcaca ccgctatcta aatcttcacg cagacgaata tgtagtggta attgtgctaa
    11341 cactttagtg ccatattttt gggcgatttt ttccgctccg ccggtgccga aaattgcctc
    11401 atggtgtccg cagtttgagc agatatgcat tgacatattt tcaatcaccc caagcactgg
    11461 tactgagact ttctcaaaca ttgagatccc tttaatcgca tctaataagg caatatcttg
    11521 tggggttgtt actaccaccg caccggtcac cggaatttgc tgtgaaagcg taagctgaat
    11581 atcacccgta cccggtggca tatcaatgac caagtaatcc aattcattcc accaagtttc
    11641 atttaaaagc tgacttaacg cactgcttgc catcgggcca cgccaaatgg tggcgttatc
    11701 ttcttccatt aaatagccga tagaattaga ttgcaagccg tgagcggtaa tcggcgtgat
    11761 gtgcttgtta tcaggagaag ttggacgttg gtcttttgct cccaacatat gcggaataga
    11821 tgggccgtaa atatccgcat ctaaaatccc cactcttgtc ccttgtgctc gtaaggctaa
    11881 agcaagatta actgaggtcg ttgatttccc taccccacct tttcctgaag tgaccgcaat
    11941 gatatttttt accccattga ctgccgggtg tttattcgcc cgttttaagg tcgcaatttg
    12001 gtaatttaat acccatttta caccgcttga acctgttact tgctttaatt tagcctctgt
    12061 ttcggctttt aaggtttcaa aaccactgtt ccacgcaaat ggcatcgtga tttcaattct
    12121 aagaatatcg ccccctaatt ctgctttttt aaacgcatta agggcaatta aatctttctg
    12181 taaagtcggg tgggaaaatt gttgcaagat tgctttaatt tcaacaagtt gctgttcatt
    12241 taattggttc attggttatc cttgtttgct aaattgcgtt ttaaatcttt gctataaatt
    12301 acttcgctat cgttattcaa atcaataccc aaaagggagg aaacaatccc aacccgatga
    12361 tggtattgaa ataatggcaa tacggcaaca tcgctataaa gctgctcgct aatttcttga
    12421 ataagtgact ctctcgcttc tgcactaagc gtttctgttt gtaaacgatt taatttttga
    12481 tcgactatct cacttttata gccggaatga ttatccgggc tcattgaatg aaacttctgc
    12541 aaaaatacaa tcggatcagg ataatctgca caccagcctg ctcgtgctat ctggtaatct
    12601 ttttgttccc ttactttatt taaagtctgc caatcaacca ttttaggtgt aatattaaat
    12661 aattctgatt gagaaagggc tcgagtaact tggttagcaa tattaatgct attctcatca
    12721 tataacaaag tcagctttaa aggattataa gggctaattc ctgcttttgt taatagctgc
    12781 tcaaccacaa caggattcca acgcttttct ctatctttta ctaagctatg tggaattaca
    12841 gactgactcg gaaccccata ttcttgccca ctatttgctg aagccaccat tgtccttatt
    12901 gcttcacgaa tctctcgttt agctaataat ggatcatcaa aattgaactc atagtaataa
    12961 gagcacaaac gcggaaattt cacgatattc gtttttttat ttaataaagg attctcgaca
    13021 atatcaaaag cagagcagtt ttggatagtt gtaattaaat catactctat agtttgaaag
    13081 ggaatttctt gggttcgagc ctttaacacc attttttgag catctagttt ctcgagacgg
    13141 taagacgcat tgctcacgaa gttatctatg gttggagcaa tcccttgata agtaggtaat
    13201 aatgcggaat gtgccagcat ttcaggcaat tggtgatttg ggtgatttag ccgaattctc
    13261 aatgtatgcg catttaatgc ctctacaccg agttcttcaa ctgactttat ttgctcttca
    13321 atcgcttttg cattttctat acccatatag atgagatatt tagacaatac agaatgattt
    13381 tgaggatcta ttaaacgtcg ccagcttgct acaaaatctt gtgcagtcac aggttggcca
    13441 ttagaccaca cagctttctc atctaaaata aacaaccact ctttttcatc ttcagtaaac
    13501 caattctgag caatggccgg aacgacatca ccttttctgt tgtaggccgt taaaccgact
    13561 aatagatctc ttaaaggagc agcatctgca gaagctttaa ttttatgtgg gtcgagttga
    13621 aatacagcag aataaattgc acgtttgagt aaagtatcac tctgccggtt ttctacccag
    13681 acagattgaa tggattgagg gcaaattaat tgatcacaag atgtaataag cagaatgcaa
    13741 gcggtaactt ttgcaatttt ttttacaaat gtaaccgctt gtaaggattt caacataaac
    13801 tccccaaagg ttaattaaga tttattttac aagaagcaca ggaaataaag ttgtaattcc
    13861 tgccacaata atttcaattc ccagcgccat taaaatcagc cccatgatac gagtaacgac
    13921 attagatcct gttttgccta attttttcac caaaggggct gaatagcgga ataaaatata
    13981 acaaattaat gcaaatacaa taatcgcaat gctaaagcca acatagtctt cccaagtatg
    14041 gtagcgggtt ccccacacaa tggttgagcc aattgcccct ggtcctgcca taatcggcat
    14101 tgctaatggc acgacaccga tattttcgta ttcagtaata tcttcatttt tctcttcttt
    14161 attttgtttg tgttcaccta atttaccgct aatcatcgtc atcgcaatgc ttacaatcaa
    14221 aatgccacca gctactctaa aagagctaag tgaaatgcta aacgcattga gaatcagatt
    14281 accaaaatag aggctgacta ataaaattac tccaatagaa acagcggtga ttaagctggt
    14341 gcgatttctt tccccctcat attggtgagc ggtcatactg aaaaaaatag gcaaggaacc
    14401 aaaaggattg actatagcaa atagaccaat gaagaattgg aggtagatgg caaaattaat
    14461 aatgatatcc acaaaaactt tctcaaacaa cagtgtttcg ggcgctatta tatcggttaa
    14521 tcaaggtaga tacaaaccaa aagcacccag cctaaaggac ggttgggtgc tttttgataa
    14581 aatgaaaggc ttgttagtgt gacgaacgtt gctgcataaa atcttcattt acctcaattg
    14641 aagcttttgc acgtagcgat tgtaagaatt cattacgtaa aattaaacga ttagcttgtt
    14701 caaattgtgg cgccaatgtc ttaaactgtt cagcattccc ttccgtaatg ttatctaagg
    14761 caacaataac tacatcgccc ttttgattac gtgccatttg ataagtcgtt ttatcttgcg
    14821 cctttttcat tgcgaaaatc gttccagcca ataccgggtt ttctacttct gcttgcatat
    14881 aaactaaagt ttgtggcgca ttaaatttca cgtccactga tttcccttca ttcaaggctt
    14941 ttacattttc ttctactttc gccagcaacg ctttttccgc tttttctgcc ttcacaaaat
    15001 tttcaactgc tgcttttgct tcatcaaaag tttgtggacg ttctgcatca taatcactca
    15061 ctctcacaaa caatgtctgt ggatttgcat cattcccaac atctaaagca tcagaatttt
    15121 gtttattttg gcgtagctct ccttcaaaca aaacttttaa tactttctca ttttgtaaag
    15181 cagtaggtac gttttcacgg gtaaacagat ccgttttttg cagttccaca ttaccggctt
    15241 tcgcaacttc ttcaagtgaa gaattattct caaaggcttt atttgccatt tcgcgcgcaa
    15301 ctgtaaaata ctcagttaac actaattctt ggcgaatagt ttgggcaatt ttatctttca
    15361 cttgtgctaa ctcaatcact tgctcaggtt tacgctccaa tactttgatg atatggtaag
    15421 cattatccac tttcaccgct gcactcatct ggccggcagt taaatttgct acagcatctt
    15481 caaaagcttt cgggaaagtg ccagcttttg cccaacctag atcaccacca ttatttgctg
    15541 ataaagtatc gctagatttg ttttttgcca aagtagcaaa atcttcccca tttttgagcg
    15601 cttgctcaat agcctgtgct tccgcttcac tagcgacttg aatatgagct aaatgggctt
    15661 cacctttagt tacataatcg gctttattgc gatcatagta agtttgaatt tgctcattgg
    15721 taatctcaac tttgctttcc acatcttttg gagaaagagt aacgtactca accgctaatt
    15781 tttcaggtgc taataattta gttttatttg cttcgtaata ggctcgcaat tcttgctcgg
    15841 aagcggtctg attttccatt tcttttgcaa ctgaaaattc ggctaaacgc acttcacgtt
    15901 gttgcaacag taattttgct aacaatgcct gctgtgccgg tacattaaaa tcactattga
    15961 taatcccctc ttgtagctgg gattgcaaca taccttcctg cacaatcgct gcatagccat
    16021 cggcacttaa attattgtgg cgtaatgttt gttggtataa ctcgttactg aatttaccat
    16081 cttgttgaaa catctggctg tttacaattt cagatttgat ttgatcagca ctaataccta
    16141 gttttaactc ttttgcatac tggcgcagaa gctcttcatc aattaatcca tttaataccg
    16201 attgattaaa ttgagcagca tactccgggc tatccattaa atcccaaaag cgactcccca
    16261 gttcagcatt taatctattt tgctcacgat taagcgtgtt attaaataat tgctgactaa
    16321 tttcttcccc atttactttc gctacagaat tatcttgtga aatcaatcct gtcccaattc
    16381 caccgattac aaatgaaata gagactaatg caaaaataat tttaaagacc ggcccatttg
    16441 tccgctcgtg cattttttca atcatttaaa aattcctaaa ttactcaaaa attgtcgctg
    16501 attatactct ttctcaaatg agaaataaac ttgcaaattt ttattgaaat ttaaccgctt
    16561 tctctttaaa attcacagtc cctgtcgtag ctgagttaga gatcggctat tgatgtatta
    16621 tcaaccctta acaaaaggaa attaaaatgt ctctaagcgt agaagcaaaa gcaaaaatcg
    16681 ttgctgaatt tggtcgtgat gcaaaagaca ctggttcttc tgaagttcaa attgcattat
    16741 taactgcaca aatcaaccac ttacaagcac actttgctga gcataaaaaa gatcaccacg
    16801 gtcgtcgtgg tttattacgt atggtttcac gccgtcgtaa attattagac tacttaaaac
    16861 gtactgatct tgctaaatat tcggaaacta tcgcacgttt aggtttacgt cgctaatttc
    16921 aaatattaga tatgagagcc gagctgaaaa gttcggcttt tttataaatt ttattcgagg
    16981 aaaaaatatg gcttttgcgt cattatttac attattagac gatattgctg ccgtgcttga
    17041 tgatgtatcg atcatgacta aagtggctgc taagaaaaca gcaggcgtaa tcggtgatga
    17101 tcttgcctta aatgctaatc aagtcagtgg aaagaatgtg gtgccagaac gagaactacc
    17161 gattgtttgg gctgtagcga aaggctcatt aatcaataaa gtgatcttga ttccactagc
    17221 gttgctgcta tcggtctttt taccgcaggc tattatcccg ctattaatga taggcggtgc
    17281 atatttatgt tttgaaggcg tagagaaatt actccatcgt ctattacata aaaacaatca
    17341 agctcattct gatgaaaccg aaaccctttc tgaaaaagat aaaattaaag gtgcaattcg
    17401 caccgatttt attctatcag cagagattat cattattgcg ttaggtgttt tgcaagactc
    17461 ttcaacccta acccaaattt tatctctctc cgctatcggg gtcggaatta ccctgtttgt
    17521 ttatggctta gttggattaa ttgtaaaact agatgatatc ggtttatggt taatgcagaa
    17581 aaaaagcaca ttctcacaag cggttggaaa aggcttatta tttgcaatgc cgtggtttat
    17641 gaaaggactt tctgtgattg gtactattgc gatgttctta gtcggtggtg gtatttttac
    17701 ccataattta ccaatgattc atcacttcgt agaacaattc ggtatctctc cccatttttc
    17761 tactctggtt gattttgcag tgggtattgt ggttggtatt attgcatgct taattatttt
    17821 acctttgatg aaattatttt ctaaaaaggc gcactaatcc ccaaaagcgt agctttggtt
    17881 aaagctagct ttttatctct tgctataaaa aaatagcagg tttcaagcct gctatttttt
    17941 taattattat aatgagttag actcagtggc tgtttgcggt aaggctaatg gctcattaac
    18001 tttagactga gtagccatat tcacctgttt gagattttcc tcacgaatac ggtttgccat
    18061 taatgtatcc cccatctgct ctgccacgtg cagtgccata atacgatcat cagcaacaca
    18121 ttcatcatga gccaataaca attcaaactg agacttcgct ttttggtatt gcccatctcg
    18181 tgtataaata tagccaagcg ctctagcata atcatcggta tatttaacat tcgctttatc
    18241 tgcccgtttt gctaatactt ttagtagctt actgtcagaa tcaatttgta aacgggttaa
    18301 ttgcacaaat aaaccttgta attgctcatc ttcaaatttc ttcaacgttt ctaaagcaat
    18361 ttcttgtgca gattgatgat cgtcactatc aattaaacgc ttgatgacac cgacacgact
    18421 atacaccgat ttacgacgac gatttggttg gttttcccac caagaaagca agccttcctg
    18481 cccttcttcc tgtaaacgct catcttgtaa accatcatca acgaaatact ctaactcagc
    18541 atactcttct gcagttaaga aattacgttg gccgatttca actaataatc tatctaacgc
    18601 aacataagct ctggattctt tataaatttg aatcgctaag cgtaatacct catcgctatg
    18661 aggtgcaagc tctagtaggc tatcaatcgc agttcgggca gccggtaatt ttccttgttg
    18721 taataaaatt cgggttcgta ccaactccac tgcaacatta ttcggtccag ctatttcagt
    18781 tgccttaatt aaatatttat ttgcagctaa atcatcacca ttttgctgag cagcttccgc
    18841 cgctttaatt aaattcagta caggctcatc tgcatgtttt gcatttttac taaagagttt
    18901 ttccgctttt gagtaattcc cttcactcat acgcattaaa ccttccagtg tttcttgctg
    18961 agctttttta tgcttacgag ttgagaacca gttataagct ccattactca tacggcatat
    19021 tttagtgaca atccattcaa gtaaataaac taccgccatt gccaacacaa aaaaaaccac
    19081 aagcattaca atgctcattt caatcacggt agttgctgtt tcaattctga cataaccttg
    19141 atttccggct aaataaggcc cagagattag tccaactaat aataaaagca tcaaaaagag
    19201 cgttctaaac ataatctatt ctccttttta ttattgtgct gaaagaggca tcgcatcttg
    19261 ctctgctttt acaggctctg cttgctctaa ttctttttca gcttttattt cgactttctc
    19321 tattttttca ggggttttat taagttgctg agcaatcacc tttaagcttt gtaatgaagt
    19381 tggagcatcc acataaatag tttgttctgc caactcatct agctctttca agaaatgttg
    19441 cacattttca tttgaagttt caaaataact tcttacccaa gagcctaccg tttgtaacga
    19501 ttttttataa agttcgcttt gctggcgagg aacagctaaa atcgcaattt gtaaacgcaa
    19561 gcgaatgttt tcacgcaaat aaatttcttg attcggtgca acaaaggctt tctcatctgc
    19621 tgcattacgt ttcgatacac gaataaaatg atctaaaaat gaagcagcac ttttttctaa
    19681 atttttctcc caatccgcaa gagaatcact tacttgccca tcttgtttgc tatttgaagc
    19741 ttgttcactt tccaaaatcg gcaaatcatc taatttattc gctaaatttg cgacacgctg
    19801 cattaaggca ttttgatcga tctgatgcaa tgcggttaat gtatttaaat cagttttgat
    19861 tgcctcacga atgtgaatcg tattcggtgc ttttgataaa acttgatctg cctctaacaa
    19921 taaatttttc gctgtttcaa tgtcattatc taacaccact ttacgagccg cattattcaa
    19981 taggaaatct gcctcagata atagccagaa tgtgttatcc gaaccagagg tattatttag
    20041 cttttgcagt tgaagctgca aactactaat ttgctgggta taaccatttt gggctgtttc
    20101 taaagcttta atccgttcta aagctttttg atattccgtg accaattcgg caatttgtgc
    20161 tttttcattt tcgaaatttg gcatctcaac catagtttga gtagtaggct gatttgcttt
    20221 agcagatact gcctgaattt gagattcaac ctctgcaaac tttttatttg ccatataatg
    20281 accagctccg ccaaccgcta aagccactaa tagtgcaact aatgccaagc cctttccgcc
    20341 cgatttttga acaaccactt gttcttttgg cgctttttgc atttctgttt gaatatcttt
    20401 ctctatagct tcgttcacta catcttcctc aatctctttt tttgcaaaag atcccgctga
    20461 atcgaccgct tgttgtgcct cttctaccac cttttcagct gaatgctcta aatgttcagt
    20521 tactttttta gatcttgaca tactcgccac ctctagttag atttgcccac tttaaataat
    20581 aatgtattca tcaaagttac attatcggct ttatccgata ccctaatctt atcttcttgc
    20641 cagcccattt gtttagctat ctttgcaatc cgccggctca ctacaaccag atcacattca
    20701 aataaccatg ctctacaatc tgctttcgct tgttcataaa gtgatcttaa aatttcacta
    20761 ctggtgatca caatagtatc tactcccaag cgtttacata agctgatttt ttcgggaata
    20821 tcatcggtaa ccggctctct acgataacac tccaaatatt gaatagttgc cccacgcaag
    20881 actgcagttt cagcaagtag ctcacgccca gaatcggctc ttagaattaa aatagtttta
    20941 tcagttagat tctgcatttc aggtaatgcc aaaaccccct cgctattttc aaattctatc
    21001 ggataaatga ccgcttgttc agctttttct gttaaatatt tcgcagtccg ttgccctacc
    21061 gcaaaatatt tcaaatctga acgaaaatgg aacccggtat ctactaatgt ttttgcagca
    21121 tagtccactg cattcggcga aacaacaaat acataatcgt ctgattttag ccgagaaata
    21181 gccgaaggaa gcaaaggtaa ttctttaccg gcttcaatcg taaatagcgg ttgatgaata
    21241 gcaaaaattt gctgttcatt caacatatct accaattctt gcccccgact atccaggcgt
    21301 gtgaccaaca cattcattat tgtacgtttt cgttataaac cgcagctaaa attttatctg
    21361 caccttgagc aagcaactgt tccgccacca aaatgcctaa ttgctccgcc tcttgcttat
    21421 gtccttttgc cgaagcccga ataatttgtg agccatctaa cgatccaact aacgcattaa
    21481 gcgttaattc atcgccctct aatgtagcat aaccaccaat cggcacttgg caaccgcctt
    21541 gcaaacgggt attcattgca cgttctgcca tcacgcaaca agcggtcgaa ctatggttta
    21601 attttgcaat gtagttcaaa atccgttcat cattggctcg agtctcaatc cctactgctc
    21661 cttgaccagc tgcgggtaat gattgttcca cagaaatata gctacggatt cgctcttgca
    21721 agcctaaacg aattaagccg gcagaggcta aaataatcgc atcatactcg ccattatcta
    21781 atttgcttaa gcgagtgccg acattgcctc gcaatgattt aacctctaaa tgcggatatt
    21841 tcgccattaa ttggcactga cggcgtaagc tcgatgtacc gaccacagca cctttcggca
    21901 aatcttctaa cgaatggtag ttgttcgaca caaacgcatc acggggatct tcacgttcac
    21961 aaatcaccgc aagccccaag ccttcgggaa agctcatcgg cacatctttc attgaatgca
    22021 ccgcaatatc agctcgattt tctaaaaggg ctaattctaa ctctttcaca aacaagcctt
    22081 ttccgccaat tttggctaat ggggtgtcta aaataatatc gcctttcgtt accatcgtaa
    22141 ccagttcgac agataattgc ggaaaatgtt tttctaattc gctttttaca aaatttgcct
    22201 gccataaggc taacgggctt tgacgggttg caatgcgtaa aatatctttc ataaattcta
    22261 aaattaaaac attga
//
LOCUS       DANLXD010000035        21845 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.035, whole genome shotgun sequence.
ACCESSION   DANLXD010000035 DANLXD010000000
VERSION     DANLXD010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 21845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21845
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.035"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(136..759)
                     /locus_tag="PXD18_001085"
     CDS             complement(136..759)
                     /locus_tag="PXD18_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6301529.1"
                     /translation="MQERITQQNERLSAYMDGQNVDTAFVETLTNSPELQQKWASYHT
                     IRSVMQGDEIILGRDFSAKMEALLENEEIESQANVEKPKGLLLKLKRWGTPIMQAGIA
                     ASVCLVAVLGVNSMNASDEIAQTQQPVLQTLPFSNSVEAVSYNAPVQDQPTEEQLELQ
                     QRKINALLENHELQRRTNNVKNLTLSEEEKQKAQTSSNTESEPNIQK"
     gene            complement(805..1377)
                     /gene="rpoE"
                     /locus_tag="PXD18_001086"
     CDS             complement(805..1377)
                     /gene="rpoE"
                     /locus_tag="PXD18_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000003307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoE"
                     /protein_id="HDL6301530.1"
                     /translation="MSEQITDQELVEKAQKGDKKAFNLLVVRYQNRVAGLLTRYVARD
                     DIPDIVQESFIKAYRSLESFRGESAFYTWLYRIAVNTAKNHLTSLGRRPPKEDILAED
                     AESYDVGAQLRESDTPENLILSEELKKVVFDTIENLPDELKTAIRLRELEGLSYEEIA
                     EVMECPVGTVRSRIFRAREAIDAKIKPLMQ"
     gene            complement(1599..3143)
                     /gene="leuA"
                     /locus_tag="PXD18_001087"
     CDS             complement(1599..3143)
                     /gene="leuA"
                     /locus_tag="PXD18_001087"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDL6301531.1"
                     /translation="MSNNNIIIFDTTLRDGEQSLKASLTVKEKLQIALALERLGVDVM
                     EVGFPVSSAGDFESVQTIARHIKNSRVAALSRAVAKDIDAAYEALKVAEAFRIHTFIA
                     SSALHVEAKLKRSFDDVVEMAVAAVKRARNYTDDVEFSCEDAGRTGIDNICRIVEAAI
                     NAGATTVNIPDTVGFCLPNEYGNIIHQVMNRVPNIDKAIVSVHCHNDLGMATANSLTA
                     VQNGARQIECTINGIGERAGNTALEEVVMAIKTRQEFMGVDTRINTQEIHRVSQMVSQ
                     LCNMPIQPNKAIVGSNAFAHSSGIHQDGMLKNKNTYEIMSPETIGLKKEKLNLTARSG
                     RAAVKGHMADMGYTETDYDLDKLYEAFLQLADKKGQVFDYDLEALAFIDMQQGDEDRL
                     KLDVITTQLISGLPASAFVQVELDGVRQSATSQGGNGPVEATYNAIMNIVGMELKMSH
                     YNLTAKGEGAEALGQVDIVVEYEGRKFHGVGLATDIVESSARALIHAINAIYRSQKVA
                     DLKAKK"
     gene            3637..4452
                     /locus_tag="PXD18_001088"
     CDS             3637..4452
                     /locus_tag="PXD18_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDL6301532.1"
                     /translation="MTLPFRAIISDLDGTLLNANHKIGDFTIDTLEQLSKKGVDIFFA
                     TGRNHPDVSQIIGKVNVKNAMLVTSNGARANNLEGKKILNHYLPEDLAFELMNIEFDD
                     QNVCLNSYQGDEWFINKEIAELKKFHQDSGFSYQVVNFAHHHGRNTEKVFFIGKTAEA
                     LVPIEHYIRDTYGDRVQMTYSALLCLEVMAKGVCKANALAELVKLRGYTLADCIAFGD
                     GMNDVEMLSLAGKGCLMGNADPRLKAVLPNNEVIGFNKDEAVASYLRATFGIV"
     gene            4518..5681
                     /locus_tag="PXD18_001089"
     CDS             4518..5681
                     /locus_tag="PXD18_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDL6301533.1"
                     /translation="MKRKTLATLVLIAALGIGGYFYYQQQTNKPQIHYITQAVTRAEI
                     NKNVLATGSVRANKRTEVGAQVSGKIQKLYVELGQSVKQGDLIADIDSSNQSNTLSTA
                     QARLSSYKAQLTSAQVALEVAQSNYNRLNKLYRANSASLNDLETAKNTLASAKATVDN
                     IKAQLKSAEISVNDAKTNLTYTQIISPMDGVIVSVPVSVGQTVNSNQTSPTIVQVADL
                     SKMLIKLEISEGDIAQVKVGQKVKFSTLAEPNREYSATIDSVDPALTTLTDNNYTEQS
                     GNTEAVYYYANVSVDNADNSLRIGMTTQAQITIDKREQVLVVPTSVIKKRGKENYVLV
                     LENEQSVERKIQIGISDTQNTEVLAGLNEGDQVIVTQRADDEKISTARGPRMF"
     gene            complement(5794..6737)
                     /locus_tag="PXD18_001090"
                     /pseudo
     CDS             complement(5794..6737)
                     /locus_tag="PXD18_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251085.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
     gene            6885..7706
                     /locus_tag="PXD18_001091"
     CDS             6885..7706
                     /locus_tag="PXD18_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010869033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase, lipoprotein e(P4) family"
                     /protein_id="HDL6301534.1"
                     /translation="MKNIKLSAMSLTALFVLTACSHTHKNSDEHHQMVLQEQATLGIN
                     WMQQSGEYQALAHQAFNAAKVAFDQAKVKKGKKKAVVVDLDETMVDNSLYAGWQVKNH
                     KPFDGESWTRWVNARQTGAIAGAVEFNNYVNSHKGTMFYVSNRKDSSEKAGTIDDMNK
                     LGFSGVSEQTLLLKKDKSNKTPRFEEIEKQGYEIVLYIGDNLNDFGDATYRKSNAERR
                     AFVAENSQQFGKKFIMLPNPNYGDWEGGLDKDYYKGNAESRVKIRHNAIKAWDGK"
     gene            7845..9125
                     /gene="pepB"
                     /locus_tag="PXD18_001092"
     CDS             7845..9125
                     /gene="pepB"
                     /locus_tag="PXD18_001092"
                     /EC_number="3.4.11.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase PepB"
                     /protein_id="HDL6301535.1"
                     /translation="MTAMKISLSTQNAPEIWGKNAILSANDAGFTVHNPNNDLATIQK
                     AARKIKNQGISTVELTGDSWDLESCWAFHQGFHSVKNQGSVQYPDLDEQQAEFDNRVK
                     CATFVRELINKPSDKLTPEKLAEQAVEFIQKMAKPNTVSYQIIRGEALQEQGYHGIWT
                     VGKGSANPPAFLVLDFNPTNDENAQVLACLVGKGITFDTGGYSLKPSDSMSTMRTDMG
                     GAALLTGSLAFAIARGLNKRVKLYLCCAENMVSHNAFKLGDIITYRNGVTVEVLNTDA
                     EGRLVLADGLIDACKQNPQFIIDAATLTGAAKVAVGNDYHSVLSMDDNLTEALFKSAK
                     TENEPFWRLPFEEFHRGQIASSFADIANIGSVPVGAGASTATAFLSYFVENYQQNWLH
                     IDASATFRKTASDLWAAGATGLGIRTVANLLLSK"
     gene            9176..9658
                     /gene="greB"
                     /locus_tag="PXD18_001093"
     CDS             9176..9658
                     /gene="greB"
                     /locus_tag="PXD18_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HDL6301536.1"
                     /translation="MAKSNYITRSGWQALDQELKFLWREERPKVTQAVSDAAALGDRS
                     ENAEYIYGKRRLREIDRRVRFLSKRLEVLQIVDYHPKQEGKVFFGAWVELENEEGEAK
                     QYRIVGCDEFDPAKNWISIDSPVARALIGKQVDDEIRVETPLGKVLLYINKIWYEQAS
                     "
     gene            complement(9700..13224)
                     /gene="recB"
                     /locus_tag="PXD18_001094"
     CDS             complement(9700..13224)
                     /gene="recB"
                     /locus_tag="PXD18_001094"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HDL6301537.1"
                     /translation="MKNLNPIQLPLNKSVLIEASAGTGKTFTIANLYLRLLLGIGCNP
                     LTVEQILVVTFTKAATEELKNRIRKNIQQCADFLKDQADGLEVESTKSYRNNLDFLAQ
                     IYPLIPNIHEALLRLSIAEREIDTASVFTIHGFCQKMLVQFAFESGVRFDLDLQPNQS
                     DLLKKLSEEVWREQFYPQDLAITYAVAEQLGTPEYALNAVRRYLSTELPEPNASLNQD
                     IAEHLAQYQQFINEVKSYWKTHSDELVETIRHDLKHKITLHGGWYRATTFEAGVEVMN
                     QWANSQHNHFPAGLYLFTTEKIAAGTKKSCEPIDSPHLAKNQAFLTAYKERFENSLSA
                     MLQYQFLIALKAKLAEYKQSHPQRSFDDLLTMLNQALKNLHTGEALSQKIRAMYPFAM
                     IDEFQDTDLTQYEIFSQIFMAENAENGFIMIGDPKQSIYKFRGADIFTYLRAAKQADE
                     QFTLGKNWRSLPEVVQAVNNLFSFANDNSPFLYEDIGFHPVEADSQKGQLVSEQGHFV
                     GYITENSKLDDLAEMCAYQIHQQLEAMAQGKFGVEKNGEFQSFAAKDIAILVRKGSQA
                     KRIKKALAKRNIKSVYLAESASVFGSEIATELCWLLQAALNPYHYKALLSALGSTLWG
                     LTAAEIHRYKENEQLWDLKVNQFVEYSNIWKEQGVLPMLHKIYLEQGIIERLKGLENA
                     DRLITDLLHLTEILQETSQALESEAELLRWYEKQVNSPDFNDEQQLRLESEEELIKIV
                     TIHGSKGLQYPIVWLPFVSQKSEGDTQTALSLYRNSQGALDWCLGSEEASFSLQYEAY
                     AEDLRLLYVALTRAESQLNLVLPKEISGWSPLHYLLADGEIPTGKVPVSDYFSQKRIA
                     ANLVEVAGELPFSLWEGEQSSDDYQAKTFSGNIRVVGQITSFTSLYAQHERFSEGKSE
                     RVMDLAQDRDVHIETIEAGYSSETAAFSPFQFPHGIKVGTVLHHFFEHCQFNEQIDRE
                     AVAKVCEQLGLSEEWIEPTALWFERILTTPLAEANFCLKAIDETKRLNEWQFYLRLKN
                     DKALHQLNALLKQHSPLAKTLPELQLPQLEGFVRGFVDCIVQVEEKFYLIDYKSNFLG
                     YLPQNYAKEHIQREMGRQRYDLQYLLYTLALHRYLTARLGEKYDYERDFGGVAYLFLR
                     AMNGENDNGVYFDKPTKQLIEEMDRLFG"
     gene            complement(13283..14674)
                     /locus_tag="PXD18_001095"
     CDS             complement(13283..14674)
                     /locus_tag="PXD18_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDL6301538.1"
                     /translation="MNLRWQEYPENARKLFKLSLPIFISQLSASGMGLADIVMAGLVS
                     DDDVSAIAVSNSIYFPLFLFVSGLLNAITPTVSYLNGSSNRHLIANQVRQGYWIVFAM
                     SIPLMAIFLNSHLILDLMQTPAEFSIKSQQYLAVMAVGLIPALLAVSLRCMNDGLSNP
                     KPAMRITFFGLLLNIPLNYIFIFGKFGLPEMGAVGCGVATAIVNLIMFFMLLHYCYTN
                     SAQKDIRLFEKWIDAPSGQILLKLCKLGLPIAFAIFTEVMLFSTSSLFLSPLGSQVVA
                     SHQAALQTSSLFFMIPMSFGIATTIMIGQTLGQKNVEGAKILSYHALITATALAIIAA
                     IIIILLKNFIPFAFTNNPISIAITAHLLIFAAVYQIPDAIQAVANGILRGYKHTQPIL
                     YVTLFCYWGVSMPLGYILARTDWIVQPMAAQGFWLVFCIGLSLAGGLLLWQMRKIQAV
                     PKAQLIAKLERIK"
     gene            complement(14810..15904)
                     /locus_tag="PXD18_001096"
     CDS             complement(14810..15904)
                     /locus_tag="PXD18_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDL6301539.1"
                     /translation="MKKLAGLFAAGLATVALTACNEEKAAEPKATAAEAKPQATNQTV
                     HLYTWTEYVPEGLLDEFTKETGIKVEVSSLESNETMYAKLKLQGKDGGYDVIAPSNYF
                     VSKMAKEGMLAELDHAQLPVIKELNQDWLNKPYDQGNKYSLPQLLGAPGIAFNTADYK
                     GETFTSWGDLWKPEFAGKVQLLDDAREVFNIALLKLGKNPNTTNPDEIKEAFEELKKL
                     RPNVLSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKENAPVDMVFPKEGPVLWVDTLA
                     IPANAKNKENAHKLINYLLSAKVAEKLTLAIGYPTSNVEALKVLPKEITEDTAIYPSA
                     EVLQKSQWQDDVGDAIELYEKYYQELKAAK"
     gene            16126..16722
                     /gene="grpE"
                     /locus_tag="PXD18_001097"
     CDS             16126..16722
                     /gene="grpE"
                     /locus_tag="PXD18_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HDL6301540.1"
                     /translation="MTTQNEHLQEEVKQEEIQPEVVTEETQAEEQNTPQEEPLALAQA
                     RIAELEAYIAEADKREQDIQLRAQAEIQNIRRRAEQDVEKAHKFALEKFSKELLTVVD
                     NLERGLDALDKAVTDETTQALVDGVEMTHKEFINTLAKFGVVAIGEVGEAFNPELHEA
                     ISMQPAEGIEANHVSTVLQKGYTLHGRVIRPAMVMVAN"
     gene            16820..17089
                     /locus_tag="PXD18_001098"
     CDS             16820..17089
                     /locus_tag="PXD18_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301541.1"
                     /translation="MDAAMSLRFDKLRFVKRLQEANQTPEMAEAFANALDEALEQSQS
                     PLATKADLQLELEKLKNEINTTIFKAITLNITILGFLMAIMKFIN"
     gene            17152..17604
                     /locus_tag="PXD18_001099"
     CDS             17152..17604
                     /locus_tag="PXD18_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HDL6301542.1"
                     /translation="MTLQFNAVALLLVVLIILGLISQNSAVTISAAVLLIMQQTLLSK
                     FIPFVDQYGLKIGIIILTIGVLSPLVSGRITLPELAQLLNWKMALSIIAGVLVAWLGG
                     RGVNLMGSQPVLVTGLLIGTVIGVAFLKGVPVGPLIAAGILSLIVGKT"
     gene            17708..21694
                     /gene="hrpA"
                     /locus_tag="PXD18_001100"
     CDS             17708..21694
                     /gene="hrpA"
                     /locus_tag="PXD18_001100"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HDL6301543.1"
                     /translation="METPLQKNHKKPPLVKLENITTADFRRLLGRLKGAENIKNIDHK
                     RSVLAEISQDLTACQARFFARTQHAQNLKIDYPDLPVSARREEILKLISENQVVVIAG
                     ETGSGKTTQLPKMCLELGRGVKGLIGHTQPRRIAARSVATRIAEELKSELGETVGYKV
                     RFNDQVSENSLIKLMTDGILLAEIQHDSYLNQYDTLIIDEAHERSLNNDFILGYLKQI
                     LHKRPDLKVIITSATIDVERFSKHFNNAPIIEVSGRTFPVEVRYRPIVEDQDQLQGIL
                     NAVDELQAEGRGDILIFMNGEREIRDTAEALQKQELRHSEILPLYARLSAAEQQRIFQ
                     PSGGLNRIILATNVAETSLTIPNIKYVIDTGTARISRYSYRTKVQRLPIEPISQASAN
                     QRKGRCGRTSEGICIRLYSEEDFNSRPQFTDPEILRTNLAAVILQMTSLGLSDIANFP
                     FVDAPDSRQIQDGIRLLEELQAIIPNEKIPSTACGGGLGRGEIRSNDGTPPLPTSPRK
                     RGDGFRLTPIGRQLAQLPVDPRLGRMVIEAAKNGSLHEVMMIVSALSIQDPRERPQEK
                     QQSADDKHRRFADKESDFLAFVNLWHFIQAQQKELSKNQFRNLCRKDYLNYNRVREWQ
                     DIYHQLRLAVREMGLKINSEPASYQPIHTALLAGLLSHIGLKDNEKMHYLGARNAHFF
                     IFPNSALFKKQPKWVMAAELVETTKLWGRMVARIEPEWVEPLAVHLTKSSYSEPHWAK
                     SKGAVMASEKVSLYGIPIVAQRSVNYGSIDPTVSREIFIRSALVEGECHNNYKFFKEN
                     HRLIREVEALEHKSRRRDILVDEQVLFEFYDQRIGTEVVSSKHFDTWWKQASKKDPEL
                     LNFEKSFLINDNANLASELDFPNFWHQGDLKLKLSYQFEVGKDHDGVTVHIPLPLLNQ
                     VEPEGFDWQIPGLRHELIVSLIKSLPKSLRRNFVPAPNYADAFLGRAEPFKKPLLDNL
                     SHELRRMTGVLVEPEQWDLSQLPPHLRMTFRVIDDKGKKLQESENLDELKFALKDEVQ
                     NTLSNIADDGIEQSGVHIWNFAELPQFYEQKKAHFSVKAYPAIVDEQTAVGVKLFETE
                     FEQARAMQAGLRRLLLLNVPSPIKYLHEKLPNKAKLGLYFAPFGKVLELIDDCIACAV
                     DQLVEEFGGFVWTEEKFTQLHEFVRANLNDKTVEIAKQVEKCLTLAYELNKRLKGKLD
                     FTMAFALSDIKTQIEGLIYPDFVTKTGYARLADLYRYLTAIERRLDKLLVDSNTDRAK
                     MLRVEAVQEAYKQLLAKLPKSKAVPDEVLEIRYMIEELRVSLFAQQLGTKYPISDKRI
                     LNVINEIK"
BASE COUNT         6545 a         4714 c         4426 g         6160 t
ORIGIN      
        1 cttaggttat tttagcaaaa aattttcact atttcgctac ttgttggtta tttcttattt
       61 tttcgctaca tttacataca aaaagccaca taattatgga taaattatgt ggctttcagt
      121 aacttatttt acctattatt tttgtatatt tggctctgat tctgtattgg aagaagtttg
      181 tgctttttgc ttttcttcct cagataaggt taaattttta acgttattag tacggcgttg
      241 taactcatgg ttttctaata acgcattaat cttacgctgt tgaagctcta actgttcttc
      301 tgttggttga tcttgaactg gcgcattata acttaccgct tcaactgaat tgctaaatgg
      361 caatgtttgt aatactggtt gttgcgtttg agctatttca tcactcgcat tcattgaatt
      421 aacccctaat accgcaacta agcacactga agctgcaata ccggcttgca taattggagt
      481 tccccaacgc ttgagcttga gcaataagcc tttaggtttc tctacatttg cttgagattc
      541 aatttcttca ttttccagta atgcttccat tttagcagag aaatctctcc ctaaaatgat
      601 ctcatcacct tgcatcacac tacgaatagt gtgataactt gcccattttt gctgtaattc
      661 agggctgtta gttaatgttt ctacaaatgc tgtatcaaca ttttgcccat ccatataagc
      721 tgaaaggcgt tcattttgtt gagtgatgcg ttcttgcata attgactcca atgatttaaa
      781 tctcttctaa aataatcttt ctatctattg cataagtggc ttgattttag catcaatcgc
      841 ttcccttgct cggaaaatac gggaacgtac agtaccaacc ggacattcca tcacttctgc
      901 gatttcttcg taacttagcc cttccaattc tcttaaacga atggcggttt taagctcatc
      961 aggtaaattt tcaatcgtat caaacacgac tttctttaat tcctcggata atatcaaatt
     1021 ctctggcgta tcactttcac gaagttgcgc gcctacatca taactttcag cgtcttcggc
     1081 aagaatatct tcttttggcg gtcttctgcc taaagaggtt aaatgatttt tcgcagtatt
     1141 cactgcaatg cgataaagcc acgtataaaa agcactttcg ccacggaaag actctaaaga
     1201 acgataggct ttaataaaag attcttgcac aatgtccgga atatcatctc ttgcaacata
     1261 acgagtcagc aaaccggcta ctctattttg ataacgtaca acaagtaaat taaatgcttt
     1321 tttatcacct ttttgtgctt tttcgactaa ttcttggtcg gtgatctgtt cgctcaactg
     1381 cggactctcc taaatatcaa tatgtcattt tccattgcac actttgttag tgtgtgcttt
     1441 atgacaaaag ttcaaaaaat ttgaaaaatt gtgtaatttt ttacattcct agataaaacc
     1501 tacttaataa actaagcaag cggtcggatt ttagcgaaat tttgcaaaaa tttcaaaaaa
     1561 tccgaccgct tgtctatgtt atgctttcgc tctataagtt atttcttcgc ttttaaatct
     1621 gccacttttt gtgaacggta aatcgcatta atggcgtgaa ttaaagctcg ggctgaagat
     1681 tccacaatat cggttgccaa acccacaccg tggaattttc gaccttcata ttccactaca
     1741 atatccactt gccctaatgc ttctgctcct tcgcctttcg cagtcagatt atagtgcgac
     1801 atttttagct ccattcccac aatgttcata atggcattgt aagttgcctc aactggacca
     1861 tttccccctt gagatgtagc actttgacga acgccgtcta attccacctg tacaaaagcc
     1921 gaagccggta aaccgctgat tagttgggtg gtaattacat ctaattttaa gcggtcttca
     1981 tcgccttgct gcatatcaat gaaggcaaga gcttctaagt cataatcaaa cacttgccct
     2041 tttttatcag caagttgcaa gaaggcctca taaagtttat ctaaatcgta atccgtttcc
     2101 gtataaccca tatcagccat atgccctttc accgctgctc tacctgaacg ggcagttaaa
     2161 ttcagcttct cttttttcaa gccgatggtt tccggcgaca taatttcata agtattttta
     2221 tttttcagca taccgtcttg gtgaatacct gaagagtgag caaaggcatt gctaccgaca
     2281 atcgctttgt tcggctgaat cggcatattg caaagctggc tgaccatttg gctgacacgg
     2341 tgaatttctt gggtattaat gcgggtatca acccccataa attcttggcg ggttttaatt
     2401 gccattacca cttcttcaag agcggtgtta ccggcacgtt cgccaatacc gttgatagta
     2461 cactcaatct gtctcgctcc gttttgcacc gctgtcaatg agttggcggt agccatacct
     2521 aaatcgttat ggcagtgaac agagacaatc gctttatcga tattcggaac acggttcatc
     2581 acttggtgga taatattgcc gtattcattc ggtaaacaga aaccgactgt atccggaata
     2641 ttcactgtgg ttgcaccggc attaatggca gcttctacaa tgcggcagat gttatcaatt
     2701 ccagtacgcc cagcatcttc acaggaaaac tcaacatcat cagtataatt tctggcgcgt
     2761 tttaccgctg caaccgccat ttcgactaca tcatcaaatg aacgttttaa tttagcctca
     2821 acgtgtaatg ccgagctggc aataaaggta tggatacgga atgcttctgc tacttttaag
     2881 gcttcataag ctgcatcaat gtcttttgca accgctcggg aaagcgccgc cacccggctg
     2941 tttttgatat gacgagcgat ggtttgtact gattcaaaat cgcccgctga agaaactgga
     3001 aaaccgactt ccatcacatc aacccctaaa cgttctaaag caagggcaat ttgcaatttt
     3061 tcttttacgg ttaaacttgc ttttaatgat tgctcaccat cacgtaaagt cgtatcaaaa
     3121 ataataatgt tattgttgct catagaagcc tctttttagg tgtttttatt tgataaaaaa
     3181 agcccgcatt ttaaggtgcg ggcaagaatg tggatagtcc atttactttt tccaatcaat
     3241 ctttatcctc gcacaaaata cgataacaga gataatcgga gtaaggtaaa tttttccatg
     3301 ttgtgttgta tgtttatgtt tgcattgtta ttcagtagtt gaggtgtata ttatccttat
     3361 ccaaatcaat gtcaatagca tttttctctt cacgcaaccg tttaccagcc cattaattca
     3421 agtcatacca gattattata ttgaataaat ccaacttatt agtaaaaaaa actatttcat
     3481 ttaagcaaaa tgatacaaag aattaatttt aataataaaa cagatattta gaatttaatg
     3541 atatttttgt aaaaaaattt aaaaaaattt gttttctttg aagtttcaga tcaaatttgg
     3601 tagcctttga tattatttta ttgttaggaa tagattatga ctctcccatt tcgtgcaatt
     3661 atttccgatc ttgatggcac actattaaat gccaatcata aaattggtga tttcactatt
     3721 gatacattag aacaactatc aaaaaaaggt gttgatattt ttttcgccac cggtcgcaat
     3781 catccagatg tgtctcagat tattgggaaa gtaaacgtta aaaatgcaat gttagtcact
     3841 tcaaacgggg caagagccaa caatttagag ggtaaaaaaa ttctcaacca ttatttaccg
     3901 gaagatcttg cctttgaatt aatgaacatt gaatttgacg accaaaatgt gtgcttaaac
     3961 agctatcaag gcgatgaatg gtttatcaat aaagagattg cagagttaaa aaaattccat
     4021 caagattcag gatttagcta tcaagtagta aattttgctc atcatcacgg tcgaaatacc
     4081 gagaaagtgt tttttatcgg caaaactgct gaagctttag taccgattga acattatatt
     4141 cgggatacct atggcgaccg tgtgcaaatg acctactctg ccctactttg ccttgaagtg
     4201 atggcaaaag gagtgtgtaa agccaatgct ctcgccgaat tggtcaaatt acggggctac
     4261 accttagccg attgtatcgc ttttggtgac ggtatgaatg atgtggaaat gctaagttta
     4321 gccggcaaag gttgtttaat gggtaatgcc gatccacgtt taaaagccgt attaccgaat
     4381 aatgaagtga ttggctttaa caaagatgaa gcggtggcaa gctatcttcg agccacattt
     4441 ggcattgttt agttgagagc aacttttttg caaatttttg tctaaatttg accgcttgta
     4501 tatcatcaag gaacagtatg aaacgtaaaa cattagccac tcttgtgcta attgccgctc
     4561 tcggaatagg cggctatttt tattatcagc aacaaaccaa taaaccgcaa atccattaca
     4621 ttacccaagc tgtcacacgg gcagaaatta acaaaaatgt gctggcaacc ggttcggttc
     4681 gagcgaataa acgcaccgaa gtgggggctc aagtttcggg caaaatccaa aaactctatg
     4741 tcgagctcgg gcaatcggtg aagcaaggag atttaattgc agatattgat tccagcaacc
     4801 agagcaacac cttaagcacc gctcaagccc ggctttcttc ttataaagca cagctcacct
     4861 ctgcacaggt tgcacttgaa gtagctcaat cgaactacaa ccgcttaaat aaactctatc
     4921 gggcaaatag tgcctcttta aacgatcttg aaacggctaa aaatacctta gcttcagcca
     4981 aagccacggt ggataacatt aaagcacaat taaaatcggc tgaaatttcg gtaaacgatg
     5041 ctaaaaccaa cttaacttat acgcaaatta tctcgccaat ggacggcgtg attgtgtctg
     5101 taccggtttc tgtcgggcaa acggtcaatt ccaatcaaac ttcgccaact attgtacagg
     5161 tagcagattt atctaagatg ctgattaaac ttgaaatttc ggagggcgat attgcacagg
     5221 ttaaagtcgg gcaaaaagtt aagttttcca cccttgctga gccaaatcga gaatatagtg
     5281 ctaccattga ttcagttgat ccggcactca ccacgctgac cgataataac tacaccgaac
     5341 aatcgggtaa taccgaagcg gtttattact acgctaatgt ttccgttgat aatgccgata
     5401 acagtttacg catcggaatg actactcaag cccaaattac tattgataaa cgggaacagg
     5461 ttttagttgt acccaccagc gtaatcaaaa aacgtggtaa agagaattat gtgttggtgc
     5521 tggaaaatga gcagtcggtt gaaagaaaaa tccaaattgg catttcggat acgcaaaata
     5581 ccgaagtatt agcaggctta aatgagggtg atcaagtgat tgttacccaa agagcggatg
     5641 atgaaaaaat cagcactgca cgtggaccaa gaatgttcta aattctaaac aacaagcggt
     5701 taaattttct gaacattttg caaaaaatta gaaaaattta accgtttgtc tattctttat
     5761 taaaacatta aaacgtctgt attaaaacga attttatttt tcgttatcgt ttttcatttt
     5821 agcgaaaatc atcgccaaaa tcgggcctga aatattgtgc cagaagctaa ataccgcact
     5881 tggcaccgca atgatagggt tggctttaaa gtgtaatgcg gcaagtgctg cccccaatcc
     5941 tgagttttgc atccccactt caatcgccac cgctttgctg tctgcaatcg gtaattttaa
     6001 taaacggctc gccaaataac cgattaaata acctaaaccg ttgtgtaatg ctactaccgc
     6061 aaaaattaat aaaccggatt caataatacg atctcggcta actgacacca ccgccgtgac
     6121 aattaatacg attgcaatca ctgaaattaa tggcattgtt tggctaaatt gctctacttt
     6181 ttgtttgaaa atagtacgaa tcaccacgcc cacaaaaatt ggcaatagca ccatttgcaa
     6241 caccgaaata aacattgccg ttgcattaat ttctaaccat tggctggcaa ataaatagaa
     6301 aattgccggc gtgagcactg gggcaagtaa agttgaaata gtggtacaag ctaccgataa
     6361 cgctgtgttg ccacgagcca aataggtcat cacgtttgaa gaagtaccgc ccgggcaaca
     6421 accaactaaa atcacaccaa tggctaaatc tgcgggtaag ttaaatgctt ttgccaatcc
     6481 ataagctaca ctcggcatac cacgaattga gcgatcacgc cgataatcac tgatttcgga
     6541 tttttcgtta cctcggcaaa atctttgaaa gttaaggtta accccattcc caacatcaca
     6601 atccctaaca gataaggaat ccaaggcagg aattgcttaa aggtttccgg aaattgtgct
     6661 gcgataaaag caaaaaacac cacccaaatg gcgaaggttt tgctgataaa ttgtgtaaat
     6721 tttaataatg tttgcatata gcctctgtgt aattgttata aaaaggttac taggctacct
     6781 tagtttgctt taaaagtgaa taggagcaat aaactattag ccataagcaa ctctttttag
     6841 gtataatcgc tctgtttatc aacaataaaa ctaaggatat acgtatgaaa aacatcaaac
     6901 tttctgctat gagcctcaca gctttatttg tattaactgc ttgttcgcac acgcataaaa
     6961 acagcgatga gcatcatcaa atggtgttgc aagagcaagc tacattaggg ataaactgga
     7021 tgcaacaatc cggcgaatac caagctcttg cccatcaagc attcaatgca gcgaaagtgg
     7081 cattcgacca agccaaagtg aaaaaaggca agaaaaaagc cgtggtagta gatttagatg
     7141 aaactatggt ggacaacagc ctttatgccg gctggcaggt taaaaaccac aagccgtttg
     7201 atggtgaaag ctggactcgt tgggtaaatg cccgccaaac cggagcgatt gccggtgcag
     7261 tggaatttaa caactacgtt aatagccaca aaggaactat gttctatgtt tcaaaccgta
     7321 aagacagcag tgaaaaagcc ggtactattg atgatatgaa caaattaggc tttagtggtg
     7381 tgagcgaaca aacactcttg ttgaaaaaag acaaatcgaa caaaacccct cgctttgaag
     7441 aaatcgaaaa acaaggctat gaaatcgtgc tctatattgg cgacaactta aacgatttcg
     7501 gcgatgcgac ttaccgtaaa tcaaacgcgg aacgccgtgc attcgtagcc gaaaacagcc
     7561 aacaattcgg taaaaaattc attatgttac cgaacccgaa ctatggcgac tgggaaggcg
     7621 gtttagataa agattactac aaaggcaatg ctgaaagccg tgttaaaatc cgccacaatg
     7681 caattaaagc ttgggacggc aaataatccg tccttaatca ggttgtaaaa acacgaaaca
     7741 atgaccgctt gtcaaggcta tgctctgcaa gcggtcattt ttgtataaaa ctttgcaaaa
     7801 gtttgttagg ataaagcaaa atccattttc taaggaaacc gataatgaca gcaatgaaaa
     7861 tttcactttc tactcaaaac gcccctgaaa tttggggtaa aaatgctatt ctttccgcaa
     7921 atgatgcggg gtttaccgta cataatccga acaacgattt agccactatt caaaaagccg
     7981 cccgcaaaat taaaaatcaa ggtatttcaa ccgtggagct gaccggcgat agttgggatt
     8041 tagaatcctg ctgggcgttt catcaaggat ttcattcggt aaaaaatcaa ggctcggtac
     8101 aatacccaga cttagacgaa cagcaagccg aatttgataa ccgtgtaaaa tgtgccactt
     8161 tcgtgcgtga attaattaat aagccatcag ataaattaac ccctgaaaaa ttagccgaac
     8221 aagcggtcga gtttatccaa aaaatggcaa aaccgaatac ggtttcttac cagatcattc
     8281 gtggcgaagc attacaagaa caaggctatc acggcatttg gacagttgga aaaggctctg
     8341 ccaatccgcc tgcattctta gtattagact tcaacccaac caacgatgaa aacgcacagg
     8401 tactggcttg cttggtcggc aaaggcatta cctttgacac cggcggttat agtctaaaac
     8461 caagcgatag tatgagcaca atgcgaaccg atatgggcgg agcggcactt ttaaccggct
     8521 cacttgcttt tgccattgct cgaggcttga ataaacgagt gaaactctac ctctgctgtg
     8581 cggaaaatat ggtcagccac aatgcgttca aattaggcga tattatcact taccgcaatg
     8641 gcgtaactgt tgaagtttta aacaccgatg ctgaagggcg tttagtgctt gccgatggtt
     8701 taattgatgc gtgcaagcaa aatccacaat ttattattga tgctgcaacc ctcacaggag
     8761 cagcaaaagt cgcagtcggc aatgactacc actcggtgct ttcaatggac gacaacctaa
     8821 ccgaagcact atttaagtct gccaaaacgg aaaatgaacc gttctggcgt ttaccgtttg
     8881 aagaatttca ccgtgggcaa attgcttctt cctttgcaga catcgccaat atcggctctg
     8941 tgccggtggg ggctggggca agtaccgcca ccgcattttt atcttacttt gtagaaaact
     9001 accagcaaaa ctggctacat attgacgcct ctgccacatt ccgcaaaacg gcgagcgatt
     9061 tatgggcggc aggagcaacc ggactgggaa taagaacagt agcgaattta ttgctttcaa
     9121 aatagaaact tcgtaggggc aaatcactat ttgctccata aacaattaaa taactatggc
     9181 taaatcaaat tacattaccc gttcaggctg gcaagcctta gatcaggaat taaaatttct
     9241 atggcgggaa gaacgcccga aagtgactca agcggtgtct gatgctgccg cattgggtga
     9301 tcgaagcgaa aatgccgaat atatttacgg caaacgccgt ttgagagaaa tcgaccgccg
     9361 tgtgcgtttt ttatctaagc ggctagaggt gctacaaatt gttgattatc accctaaaca
     9421 agaaggcaaa gtctttttcg gcgcttgggt ggaattagaa aatgaagagg gcgaggcaaa
     9481 acagtaccgt attgttggtt gcgatgagtt cgacccagca aaaaactgga tttcgattga
     9541 ctcccctgtc gcccgagcct taatcggcaa acaggttgat gatgaaatta gggtagaaac
     9601 tccgcttggt aaagtgttgc tttatatcaa taagatttgg tatgagcaag cgagttaatt
     9661 acccataaag gggcgaaaaa ttttcgcccc tacacatatt tacccaaaca accgatccat
     9721 ttcttcaatc aactgcttag tcggcttgtc aaaataaacg ccgttatcat tttcgccgtt
     9781 cattgccctt aagaacaagt aagccactcc gccgaagtct cgttcataat cgtatttttc
     9841 acctaaacgg gcagttagat aacggtgtaa ggcgagagtg taaagcagat attgcaaatc
     9901 atagcgttgt ctgcccattt cccgttgaat gtgttctttc gcataatttt gtggcagata
     9961 gcctaagaaa ttcgatttgt aatcaattaa gtagaatttc tcctccactt gcacgataca
    10021 atctacaaag cctcgcacaa aaccttctaa ttgcggtaat tgcaattcag gtaaagtttt
    10081 tgctaaaggg ctatgttgct ttaataacgc atttaattga tgtaaggctt tatcattttt
    10141 taagcgtaaa tagaattgcc actcgtttaa tcgtttggtt tcatcaatcg cttttaagca
    10201 gaaatttgcc tctgccaaag gggtagttag aatacgctca aaccataatg ctgttggttc
    10261 aatccattcc tcgcttagcc ctaattgctc gcatacttta gcaacagcct ctctatcaat
    10321 ttgttcgtta aattggcaat gctcaaaaaa gtgatgtaac accgtgccca ctttaatacc
    10381 gtgtgggaat tggaatggcg agaaagcggc agtttcactt gaataacctg cctcaatggt
    10441 ttctatatgt acatctcgat cttgggctaa atccattacc ctttctgatt tcccttcact
    10501 aaaacgctcg tgttgggcat aaagtgaagt aaagctggta atttgaccaa ccacacggat
    10561 attgccacta aaggtttttg cttggtaatc gtctgaagat tgttctcctt cccacagtga
    10621 gaaaggtaat tccccggcta cttcaaccaa attagcagca atccgttttt ggctaaaata
    10681 atctgaaaca ggcacttttc ctgtaggtat ttccccgtct gctaacaagt aatggagtgg
    10741 agaccagccg gaaatctctt tcggcaacac taagttaagc tgagattccg cgcgggttaa
    10801 tgccacatac agcaaacgta aatcttccgc ataagcctca tactgtagcg aaaaacttgc
    10861 ctcttctgag cctaaacacc aatccagcgc accttgagaa ttgcgatata aacttaatgc
    10921 tgtctgcgtg tctccctcac ttttttgtga aacaaaaggt aaccaaacaa ttggatattg
    10981 caagcctttc gagccgtgaa tcgtcacaat tttgattagc tcctcttcac tttccaaccg
    11041 aagttgttgc tcgtcattaa aatcgggcga attaacttgc ttttcatacc accgcaacag
    11101 ttcagcttca gactctaacg cttgcgaggt ttcctgcaaa atttcggtta aatgcaataa
    11161 atccgtaatc aagcgatccg cattttccaa acctttcaaa cgttcgataa tgccctgctc
    11221 caagtagatt ttatgcaaca tcggcagaac gccctgctct ttccaaatgt tgctgtattc
    11281 cacaaactga ttgactttca gatcccaaag ttgctcattt tccttatagc ggtggatctc
    11341 tgccgccgtt aagccccaca aggttgagcc taacgccgat aataatgcct tgtaatgata
    11401 cggattcagt gcggcttgca ataaccaaca caattctgtt gcaatttccg aaccaaatac
    11461 agaagctgat tcagctaaat agacggattt gatattacgt tttgccaacg cctttttgat
    11521 tcgcttagct tgtgaacctt ttcggactaa aatcgcaata tcttttgcag caaaggattg
    11581 aaattcgccg tttttttcaa ctccgaattt gccttgagcc atcgcctcaa gctgttgatg
    11641 aatttgataa gcacacattt cagccaaatc atctaattta ctgttttccg tgatgtagcc
    11701 tacaaaatgc ccttgctcac taactaactg acctttttgg ctatcagcct ccactgggtg
    11761 aaagccaata tcctcataaa gaaacggaga gttatcattt gcaaaagaaa acaaattatt
    11821 gaccgcttgc accacttcag gcaacgaacg ccagtttttg cccaatgtga attgttcatc
    11881 agcctgcttt gctgctcgca aatacgtgaa aatatccgcc ccacggaatt tatagatcga
    11941 ctgtttcggg tcgccaatca taataaagcc gttctctgca ttctctgcca taaaaatttg
    12001 gctgaaaatt tcatattggg ttaaatcggt atcttggaac tcatcgatca tcgcaaaagg
    12061 atacatcgcc cgaattttct gagacaaggc ttcgcccgtg tgtagatttt tcaacgcttg
    12121 gtttagcatt gtgagtaaat catcaaaact gcgttgtggg tgcgattgtt tgtactctgc
    12181 caattttgct ttgagagcaa ttaaaaattg atactgcaac attgctgaca agctgttttc
    12241 aaaacgttcc ttgtaagcgg tcaaaaaagc ctgatttttt gcaagatgag gggaatctat
    12301 cggctcacag ctctttttcg tgccagccgc aattttctct gtagtgaata aataaagccc
    12361 tgccgggaaa tggttatgtt gcgaattagc ccactggttc atcacttcca caccggcttc
    12421 aaaagtggtc gctcgatacc aacctccgtg cagcgtaatt ttatgcttta aatcgtggcg
    12481 gatagtttca accagttcat ctgaatgcgt tttccaatag gatttcacct cattaataaa
    12541 ctgctgatat tgagccaaat gctcggcaat atcttgattt aaagaggcat ttggttcagg
    12601 taattcagta gataaataac gccttaccgc attgagggca tattccggcg taccaagttg
    12661 ttcggcaacc gcataagtga tggctaaatc ttgcggatag aattgctctc gccagacttc
    12721 ttcacttaat tttttaagta gatcactttg gtttggctgt aaatccaagt caaaccgcac
    12781 gcccgactca aacgcaaact gaaccagcat tttttgacaa aagccgtgaa tggtaaacac
    12841 gctggcggta tcaatttccc gttcggcaat acttaaacgt aacaatgctt cgtgaatatt
    12901 cggaatgagc ggataaatct gtgccaaaaa atcaaggttg tttcgatagg attttgtact
    12961 ttccacttcc aaaccatcag cttgatcttt taaaaagtcg gcacattgct gaatattttt
    13021 acggatacgg tttttcaact cttcggttgc tgctttggta aatgtcacca ccaaaatttg
    13081 ttccaccgtt aacgggttgc aaccaatgcc gagcaataaa cgcaaataca ggttggcaat
    13141 ggtaaaggtt ttccctgtac ctgccgacgc ttcgattaaa acggatttat tcaaaggtag
    13201 ttggatagga tttaggtttt tcatcagcaa agttatcttc taaaagtaaa aagcactgct
    13261 atgttccata gcagagaatc tgttatttaa tccgttctaa ttttgcaatt aattgtgctt
    13321 ttggcaccgc ttgtattttt cgcatttgcc ataataacaa gccaccagcc aaacttaagc
    13381 cgatacaaaa gactaaccaa aaaccttgag cagccattgg ttgtacaatc caatcggttc
    13441 ttgccaaaat gtagcccagc ggcatactca ccccccaata acaaaacaga gtaacgtata
    13501 aaatcggttg ggtatgttta taaccacgca gaatgccgtt tgctaccgct tgaatggcat
    13561 ccggtatttg ataaaccgcc gcaaaaatca ataaatgagc ggtaatcgca atcgaaatcg
    13621 ggttgttggt aaacgcaaaa gggataaaat ttttcaacaa aataataatg atggcggcaa
    13681 taatagctaa agcggttgcg gtaatcagtg cgtggtaact taagattttc gccccctcca
    13741 catttttctg cccaagtgtt tgtccgatca taatggtggt tgcaatgcca aacgacatcg
    13801 gaatcataaa aaatagcgag ctggtttgca atgcagcttg gtggctagcc accacctgtg
    13861 aaccaagtgg tgacagaaac agcgatgagg tcgaaaacag catcacttcg gtaaaaatcg
    13921 caaaggcaat cggcagccct aatttgcaaa gttttagcaa aatttgaccg cttggagcat
    13981 caatccattt ctcaaacaaa cgaatatctt tttgggcaga attggtgtag caataatgca
    14041 acaacataaa aaacataatc aagttcacaa ttgcggttgc tacaccacag cctaccgctc
    14101 ccatttcagg caagccaaat ttgccgaaaa tgaaaatata gtttagcgga atgttcagca
    14161 ataaaccgaa aaaggtaatc cgcatcgcag gtttagggtt agataatcca tcgttcatac
    14221 aacgtaaact caccgccagc aaagcaggaa taagcccaac tgccattact gctaaatatt
    14281 gttgcgattt gattgaaaac tcagccggtg tttgcattaa gtctaaaatc agatggctgt
    14341 ttaggaaaat tgccattaat ggaatagaca ttgcaaacac aatccaatag ccctgcctta
    14401 cttggttagc aattaaatgg cgattgctcg agccgtttaa gtaagaaacg gttggggtaa
    14461 ttgcattcag caaccctgac acaaacagaa agagcggaaa gtaaatcgaa ttacttaccg
    14521 caatcgccga gacatcatca tcactcacca agccagccat tacaatatcc gccagcccca
    14581 ttccggaagc tgaaagctga gaaataaaaa tgggtaggga tagtttaaat aatttgcggg
    14641 cattttcagg atattcttgc catcttaagt tcatggttta atctctcaaa atctaagtat
    14701 gtttttatga ttgtacctta gaaagcggtc gtttttgcca aattttttgc aactcaaaag
    14761 agaaagcctc taaagattgc tccctagagg cttcagaatt aatcagctat tattttgctg
    14821 cttttaactc ttggtagtat ttttcgtaaa gctcaattgc atcaccaaca tcatcttgcc
    14881 attgagattt ttgtaaaacc tctgcagatg ggtaaattgc tgtatcttca gtaatttctt
    14941 tcggtaatac ttttaatgct tctacgtttg aagttgggta accaatcgct aacgttaatt
    15001 tttcagctac ttttgcactt aataagtagt tgattaattt atgtgcattt tctttgtttt
    15061 tcgcatttgc cggaatggct aaagtatcga cccaaagcac aggaccttct ttcgggaata
    15121 ccatatcaac cggtgcgttt tctttcttcg caatacgtac agaaccgttc cataactgac
    15181 ctacagaaac ctcaccagca ataaatgagt ttgccgggtt atcagaggta aatgaaagca
    15241 catttggacg taattttttc aactcttcaa aggcttcttt gatttcatcc ggattagttg
    15301 tatttgggtt tttacctaat tttaataacg caatgttgaa tacttcacga gcatcatcta
    15361 ataattgtac tttacctgca aattcaggtt tccacaaatc accccaagaa gtgaatgttt
    15421 cacctttgta atctgccgta ttaaatgcaa tacccggcgc acctaataat tgaggtaatg
    15481 aatatttgtt tccttgatcg taaggtttat ttaaccaatc ttggtttaat tctttaataa
    15541 ccggaagttg tgcgtgatct aattccgcta acattccttc tttcgccatt ttagatacaa
    15601 agtagtttga tggagcaatt acatcataac cgccatcttt gccttgtaat tttaatttag
    15661 cgtacattgt ttcgttagat tcaagacttg aaacttcaac tttaatgccg gtttctttcg
    15721 taaattcatc taacaaacct tcaggcacat attcagtcca agtataaagg tgaactgttt
    15781 gatttgttgc ttgaggtttt gcttcagccg cagttgcttt tggctctgcc gctttttctt
    15841 cattacacgc tgttaatgca actgttgcta aacctgctgc aaataaaccc gctaattttt
    15901 tcatttaagt tttctccgtt aaagaaaagt gattaaaaaa tatagccttg cctaagggcg
    15961 gaaaagacta gggcatttta agcccccccc cgtattttgc aagccttttc tgattaaaaa
    16021 gtgaattatt ttcgcaaaaa gaaagagata tgcttgaaat cccttaattt atcgctatat
    16081 taaggaagat ttacatttcc agattagtct tttaaaggat aaaaaatgac cactcaaaat
    16141 gaacacttac aagaagaagt aaaacaagaa gaaattcaac ctgaagttgt aactgaagaa
    16201 actcaagcgg aagaacaaaa tacacctcaa gaagaaccgt tagctctcgc tcaagctcga
    16261 attgccgagt tagaagccta tattgcagaa gccgacaaac gtgagcaaga tattcagctt
    16321 agggctcaag cagaaattca aaatatccgc cgccgtgcag agcaagatgt tgaaaaagct
    16381 cacaaattcg ctttagaaaa attctccaaa gaattgttaa cagtggttga taaccttgaa
    16441 cgtggattag atgcccttga taaagccgtg accgatgaaa ccactcaagc gttagttgac
    16501 ggcgttgaaa tgactcataa agaattcatc aatacactgg ctaaatttgg tgtggtggca
    16561 attggcgaag taggcgaggc atttaaccct gaattgcacg aagctatttc aatgcaacct
    16621 gccgaaggaa ttgaagccaa ccatgtcagc acagtgctac aaaaaggcta cacgcttcac
    16681 ggacgagtga ttcgcccggc aatggtgatg gtggcaaact aaattgtcga ttttcgacga
    16741 agatcacaaa atctcctaaa attcctgctt gtgattatgc taaattagtt tataacttaa
    16801 ccacaagagg ataattgaaa tggatgcagc tatgagccta cgatttgaca aattacgttt
    16861 tgtaaaacgc ttgcaagaag ccaatcaaac acctgaaatg gctgaggcat ttgctaatgc
    16921 tctcgatgaa gccttagagc aaagtcaaag cccactagca acaaaagctg atttgcaact
    16981 tgaacttgaa aagctaaaaa atgaaatcaa taccacgata tttaaagcaa ttaccttaaa
    17041 tatcacaatt cttggctttt taatggcaat aatgaaattt attaactagc tcaacgttta
    17101 attaaccact cccttacttc tatgaagtaa gggtttttac gttttaatcc tatgacttta
    17161 caatttaacg cagtggcact tctacttgtg gtgctgatta ttttagggct gatcagccaa
    17221 aacagtgcgg ttactatttc agccgccgta ttgctgatta tgcaacaaac cttactttct
    17281 aaatttatcc cctttgtcga tcaatacggc ttaaaaatcg ggattatcat tttaaccatc
    17341 ggcgtactta gccccttggt ttcagggcga attacgcttc ccgaacttgc ccaactattg
    17401 aactggaaaa tggcactctc aataattgct ggcgtgctgg tagcgtggct aggtggcagg
    17461 ggcgtgaatt taatgggcag ccagccggtg ttggtaactg ggcttttaat cggcacggtg
    17521 atcggcgtgg cgttcttaaa aggcgtaccg gtcgggccgt tgattgcggc agggattttg
    17581 tcactgattg ttggtaaaac ctaatgtagg gtggacgtaa gtccacgcat aaaatcccta
    17641 ttctgttacg tgggcttacg cccaccctac aataaatcac aaggtcttaa tgcaaaagag
    17701 aaattaaatg gaaacacctt tgcaaaaaaa tcataagaaa ccaccgcttg tgaagctgga
    17761 aaatatcacc accgccgatt tccgccgcct gctcggtcgc ttaaaagggg cggaaaatat
    17821 taaaaacatc gatcacaagc ggtcagtttt ggcagaaatt tcgcaagatc tcaccgcttg
    17881 tcaggcacgt tttttcgcac gaactcagca cgcccaaaac ctgaaaattg actaccctga
    17941 tctgcctgtt tccgctcgcc gtgaggaaat tttaaaactg attagcgaaa atcaggtggt
    18001 ggtgatcgca ggggaaaccg gttcgggcaa aaccacccag ttaccgaaaa tgtgcttaga
    18061 actcgggcgt ggggtgaagg gcttgattgg gcatacccag ccccgccgaa ttgccgcacg
    18121 ttcggtggcg actcgcattg ccgaagagct gaaatcggaa ctgggcgaga cggtcggtta
    18181 caaagtccgc tttaacgatc aagtcagtga aaacagctta atcaagctaa tgacggacgg
    18241 tattctgctg gcggaaatcc agcacgacag ctatttaaat cagtacgata cgctgattat
    18301 tgacgaagct cacgagcgtt cgctgaacaa cgattttatt ttgggttatc tgaaacaaat
    18361 tctgcacaaa cgccccgatc tgaaagtgat catcacctcg gcaactattg atgtagaacg
    18421 tttttccaaa catttcaaca acgccccgat tattgaagtc tctggtcgga cattcccggt
    18481 ggaagtgcgt tatcgcccga tagtggaaga tcaagatcaa ctgcaaggta ttctaaatgc
    18541 ggtggacgaa ctgcaagccg aagggcgtgg cgatattctg atttttatga acggtgaacg
    18601 ggaaattcgt gacactgccg aagccttgca aaagcaggaa ctgcgacata gcgaaatttt
    18661 acccctttac gcccgcttat cggctgccga acaacaacgg attttccagc caagcggtgg
    18721 gctaaaccga attattctgg cgaccaacgt ggcagaaacc tccctcacta ttccgaatat
    18781 taaatatgtg atcgacaccg gcacggctcg tatttctcgt tatagctacc gcaccaaagt
    18841 gcaacgcttg ccgattgagc cgatttcgca agcctccgcc aaccagcgga aagggcgttg
    18901 tgggcgaacc tcggaaggga tctgtatccg cctctattca gaagaggatt tcaacagccg
    18961 tccacaattt accgatcctg aaattctacg aactaacctt gcagcggtta ttttacaaat
    19021 gacttcgctt ggattgagtg atattgccaa tttcccgttt gttgatgccc ctgacagccg
    19081 acaaattcag gacgggattc ggttgttgga agaattacag gcgattattc caaatgaaaa
    19141 aatcccctcc accgcttgcg ggggagggct agggaggggg gaaatccgtt ctaatgatgg
    19201 cactcccccc ctcccaacct ccccccgtaa acggggggat gggtttagat taaccccaat
    19261 cggtcgccaa ctcgcccaac tgccagtcga tcctcgctta ggcagaatgg tgatcgaggc
    19321 ggcgaaaaac ggttcgttgc acgaagtgat gatgattgtg tcagctctct caatccaaga
    19381 ccctcgtgag cgtccgcagg aaaaacagca gtcggcagac gataaacacc gccgttttgc
    19441 cgataaagag agcgatttct tagcctttgt gaatttgtgg cactttatcc aagcccaaca
    19501 aaaagaactg tcgaaaaacc agttccgtaa tctctgccgt aaggattatt tgaactacaa
    19561 ccgtgtgcgg gagtggcagg atatctacca ccaactccgc cttgcagtta gagaaatggg
    19621 cttaaaaatt aacagtgagc cggcaagtta tcagccgatt cacaccgccc tgctcgccgg
    19681 cttgttgtcg catatcggct tgaaagataa tgaaaaaatg cactatttag gagcaagaaa
    19741 tgcccacttt ttcattttcc cgaactcggc acttttcaaa aaacagccga aatgggtaat
    19801 ggccgcagag ctggtggaaa ctaccaaact ttggggacga atggtcgctc gcattgagcc
    19861 ggaatgggtg gaaccgttgg cagtacacct cactaaatcc agttacagcg aaccacactg
    19921 ggcgaagtca aaaggagcgg taatggcatc ggaaaaagtg tcgctctacg gcattccgat
    19981 tgtggcacaa cgctcggtga attatggctc gatagaccca accgtcagcc gtgagatttt
    20041 tatccgctcg gcgttggtgg aaggcgaatg tcacaacaat tacaaatttt tcaaagaaaa
    20101 tcaccgcttg atccgtgaag ttgaggcatt ggaacacaaa tcccgccgcc gtgatatttt
    20161 ggtggacgag caggtgctgt ttgagtttta cgatcagcgg attggcaccg aagttgtgtc
    20221 gagcaagcat tttgatactt ggtggaaaca ggcaagcaaa aaagatcctg aactgctgaa
    20281 ctttgaaaaa tcgttcctga tcaacgacaa cgccaacctt gccagcgagc tggatttccc
    20341 gaatttctgg catcaaggcg atttaaaact caaactgagc tatcagtttg aggtcggaaa
    20401 agatcacgat ggcgtgacgg tgcatattcc gctaccgctg cttaaccaag tggaacccga
    20461 aggtttcgat tggcaaattc cggggctacg ccacgagctg atcgtctcgc tgattaaatc
    20521 tttaccgaaa tcgctacggc gaaattttgt gccggcgccg aattatgcgg acgccttttt
    20581 agggcgagcc gagccgttta aaaaaccgtt gctggacaat ctaagccacg aactacgccg
    20641 aatgacgggt gtattggtcg agcctgaaca gtgggattta agccaactgc cgccacattt
    20701 gcggatgact ttccgtgtga ttgatgataa aggcaagaaa ctgcaagaga gcgaaaacct
    20761 tgatgagctg aaatttgcct tgaaagatga ggtgcagaac accctttcca acattgccga
    20821 tgacggcatt gagcaaagtg gtgtgcatat ttggaatttt gccgaattgc cacagttcta
    20881 tgagcagaaa aaagcccatt tcagcgtgaa agcctaccct gcgattgtcg atgaacaaac
    20941 ggctgtgggg gtgaaactgt ttgaaacgga atttgagcag gctcgtgcaa tgcaggcagg
    21001 acttcgccgt ctgctgttgc taaatgtgcc atcgccgatt aaatatctac acgaaaaact
    21061 gccgaacaaa gccaagctgg gcttatattt tgccccgttc ggcaaagtat tggagctgat
    21121 tgacgactgc attgcctgtg cggtagatca gctggtagaa gagttcggcg ggtttgtctg
    21181 gacggaggaa aaattcaccc aactgcacga atttgtgcgg gcaaatttaa acgataaaac
    21241 cgtagaaatt gccaaacagg ttgaaaagtg cctcacactg gcctacgagc taaacaagcg
    21301 gttaaaaggc aagctcgatt ttacgatggc gtttgcgtta agcgacatca aaacccaaat
    21361 cgaagggctg atttaccccg actttgtcac caaaaccggc tacgcccgcc ttgcagattt
    21421 ataccgttat ttgaccgcta tcgaacgccg tttggataaa ctgttggtgg acagcaacac
    21481 cgaccgagcc aaaatgctac gggtggaagc agtgcaagag gcatataaac agctccttgc
    21541 caaactgcca aaatccaaag cggtgccgga cgaggtactg gaaattcgat atatgatcga
    21601 agaactgcgg gtcagtctgt tcgctcaaca gctcggcaca aaatacccga tttcggataa
    21661 gcggattttg aatgtgatca atgaaataaa gtaatattcc ctatacaaca agcggtcaga
    21721 taagtaaaaa attttgcaac tctgaccgct tgttttctcg aatacctatt cctctcgctt
    21781 cagaagcaaa cctgctacat ttttttgatt aaaaaaatct caagataaaa attagaaaac
    21841 taaat
//
LOCUS       DANLXD010000036        21688 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.036, whole genome shotgun sequence.
ACCESSION   DANLXD010000036 DANLXD010000000
VERSION     DANLXD010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 21688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21688
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.036"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            83..328
                     /locus_tag="PXD18_001101"
     CDS             83..328
                     /locus_tag="PXD18_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301544.1"
                     /translation="MKLMKDMGTQSYIWSGFSTWLAWLGEQQNLMLLSLAIGIVTAIA
                     GLIQRFDEWRRRKREDERAEELHQAKMARLRKGLSDE"
     gene            321..890
                     /locus_tag="PXD18_001102"
     CDS             321..890
                     /locus_tag="PXD18_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HDL6301545.1"
                     /translation="MSKSLKYGSGIVCGIAAIITLVQYQHPEIRTNQAGLEIIGNAEG
                     CRRDPYKCPADVITVGIGSTEFGGEKIDPNRIYSDKEIAERWAKDLKIAESCVNRHFN
                     GKDMNDNQFSGMTSAVFNMGCYNMRFYRNKQGQYVQTTIHKLAVNKQFEEMCHRLPDF
                     IRASGKVLNGLVIRREKEKALCLTGLVAR"
     gene            863..1213
                     /locus_tag="PXD18_001103"
     CDS             863..1213
                     /locus_tag="PXD18_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2570 domain-containing protein"
                     /protein_id="HDL6301546.1"
                     /translation="MLNWISGTIAIVILGLCVWLWGQSQMIDSLRAENRAQAQTIEQQ
                     QKANQRLTDSLEQERQAVEKIQKIANELRNKVEMAKNEITSILAQDSCAKADLPNGVA
                     DSIKRLHQQNNHKH"
     gene            1218..1391
                     /locus_tag="PXD18_001104"
     CDS             1218..1391
                     /locus_tag="PXD18_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301547.1"
                     /translation="MYPPAAYLVPCGRTEFSGRTYGDTVEYLVKVMGERDLCANQIDR
                     IREWQAQTKQGFK"
     gene            1783..2307
                     /locus_tag="PXD18_001105"
     CDS             1783..2307
                     /locus_tag="PXD18_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDL6301548.1"
                     /translation="MTKKGEVKATSKGVGKLTDKQKRFVEEYLIDLNATQAAIRAGYS
                     EKTAYSIGEENLRKPEIRSAIQEAQNKRSERTQITQDDVLNGLLEVIAMSTGKKIVTE
                     TDVAKNENGELVGFDIAKTKFEPAAANKALELLGKHLGMFKDKVDLINSDGSLNRPMV
                     IELIAPSLDDESTD"
     gene            2291..3511
                     /locus_tag="PXD18_001106"
     CDS             2291..3511
                     /locus_tag="PXD18_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBSX family phage terminase large subunit"
                     /protein_id="HDL6301549.1"
                     /translation="MKAQIELPPKLLPVFAKDYRYKGAYGGRGSGKTRAFAKMSAVSA
                     YKRAMQGESGVILCGREFMNSLEESSLEEVKQAIKSEPFLANFFDVGEKYVRTKDGRI
                     SYVFSGLRHNLDSIKSKARILIAWIDEAETVSETAWRKLIPTVRENNSEIWVTWNPEN
                     RGSATDTRFRQNPPENSCIIEMSYQDNPWFPDVLEQERLNDKQRLDDATYRWIWEGDY
                     LESSDAQIFRDKYQELEFKPNPDFDGPYYGLDFGFAQDPTAAVKCWVFNGDLYIEFEA
                     GKVGLELDDTADFIAKGVPQIADHVVRADSARPESISYLKRHGLPRIIGVDKWKGSVE
                     DGIEHIKSYGKVFIHPRCQQTLNEFRLYSYKTDRLSGDVLPVVIDAHNHFIDALRYAL
                     TPLMQVKSAKGVLL"
     gene            3508..4884
                     /locus_tag="PXD18_001107"
     CDS             3508..4884
                     /locus_tag="PXD18_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1073 domain-containing protein"
                     /protein_id="HDL6301550.1"
                     /translation="MSLEQDRLAFLAEALGLGNIKRRTLWKEFGYPNTLTFNHFLKAY
                     KRNSIAFAAINRLLDGCWVDCPVIVEGEQKNESKQTTEWESKVERFMKRYWSAIKEAD
                     RRNLVGNYSALLLQVRDGQQWDQPILQGALSSIGEFGLVKLIPVWQSQLSVTEFQEDV
                     TADNYGEPLMYQFSESAFGKKSVSRNIKVHASRVILLNEGGDFNSPHSGVPLLEAGYN
                     KLVDLEKTSGGSAEGFLKNASRQLGIKLTKDVDLRQLEDSAKALGFSSFSDALNDKIK
                     KINSGTDSALITHEGDASVLSVAPADPKPTWEISANEFAASVQIPFTILFGQQTGRLA
                     SDEDKTDWANRCNGRRNGFLTDVITQLLNRLWFIGVLPMPKNSDVTVSWSDLLAPSEK
                     EKIANAQALASVATTSQSAFGFAAVTANEIRESLGFEPLPDNLIPPTIDDENEDQDEN
                     QATADSDK"
     gene            4838..5776
                     /locus_tag="PXD18_001108"
     CDS             4838..5776
                     /locus_tag="PXD18_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HDL6301551.1"
                     /translation="MKIKTKIKPLRIPTNKADPLNMGVSVAKLFRHIDVIYSQIKRSI
                     KQQILQKMSLRLQANNFEYFPSYLTATELADLLETLQKIIDKEILSNGSQGENLWFDS
                     YIDEAALKGTQSAVTDLGLQSEAYRSQRNLSSIVFSPAYFNRLAIAHMASYSEWQGLS
                     DELRKSLAGVITEAVLNGKNVKETAREIRQKLDVSSKRAKRIAQSSQLAAYRRAEWQE
                     AEEAKEELGLNTKLLHFSALKATTRLAHAQRHGKYFDVAEVREWYSRDGNQFNCYCKQ
                     SVVVVNADGKTDIEPLLVGLAKERKQWVGALKNVKK"
     gene            5763..7133
                     /locus_tag="PXD18_001109"
     CDS             5763..7133
                     /locus_tag="PXD18_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2213 domain-containing protein"
                     /protein_id="HDL6301552.1"
                     /translation="MSKNNVNIVTVINSKNISTESIDGDQHLIIRGVVPIVDDVVMND
                     GLYPADEINKSYNSLEGNFMPLGHPKIEGKYVSAQDVRAVNKHHVGAWAKNVRKESGK
                     VLVDMYINRRFAEGSEQGKTLLERLDGMVTNTNAEPIHVSTGLILNKVKQSGKSKGKK
                     YSWIATNMSFDHIAILLDVPGAATPDDGVGIFVNQDGSEMGVENVNLTQAADYRTEKL
                     FDKVRFYLMANSDLSFEEIHRALREAIRPEGKDKWSFWVEAVYPKYFIYSDDNSGKKY
                     KRSYFIDENDNVQLTSEPVEVVKKIGYEEITTNEEHNPMKTKILAVLNAANVKTEGLN
                     DDQLLEAYNKLQADKGKEPEKPKNEDDSEIDEKIKKAVNAAIEPLQQALQANTDKEQA
                     AMRAAVKAKFNMSDAAVNALQGEVLTELYAQTQQSVGLNNNSANGNGDNQWDGYSLNQ
                     EEKGNE"
     gene            7126..7560
                     /locus_tag="PXD18_001110"
     CDS             7126..7560
                     /locus_tag="PXD18_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301553.1"
                     /translation="MSNVIYRGSVKREPQTVNIVINDTSAPGAVVKLHNGKLEAAADL
                     KGRRFLLGNNRFKGQTIEQAYAKGDTATAFRLEPEQEYYAQIADGTYNFGDELTVKQA
                     GGKLTKAETGDVVLFFFDEESQRVISGGKGYADVVVANAYTK"
     gene            7575..8564
                     /locus_tag="PXD18_001111"
     CDS             7575..8564
                     /locus_tag="PXD18_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="encapsulin"
                     /protein_id="HDL6301554.1"
                     /translation="MLKFTKEQERFVINERINYDKKHALMAANSAGLLGNAMTLPKDV
                     WAEWDRDAVQIQREELVVFNDLAGISKSMPIGKLIHHFQTVSDSGSVNISLDGRSSAK
                     TDNVVLNYHGTPLPIIDSTFSFGWRDMSAAQSEGYQIDGAARANSLRKVAEKMEDLAL
                     NGDSSIVVGNAKLYGLRTAPNRMTNTHNLDLATATPKEIYDVFRDLISKFHAKNYYSP
                     VTLYVNYGDYFAMSTRDYSEQKSEGSILNKVMTIPQIAKIVPASRVPQNEILGLCKRS
                     DVYQVLNGMPLVTRPIARHNETDDYSFQIMAAVAVEFKFDDKGNAGYIQYTKS"
     gene            8576..8800
                     /locus_tag="PXD18_001112"
     CDS             8576..8800
                     /locus_tag="PXD18_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301555.1"
                     /translation="MKWLLTHDSHELKKGDVYEGETLPLWLVGKAIEIEEKSFEVATP
                     SDHADGETGETGETGETGETGQKGKKDKGK"
     gene            8803..9180
                     /locus_tag="PXD18_001113"
     CDS             8803..9180
                     /locus_tag="PXD18_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301556.1"
                     /translation="MAAEIELSEARTTLDELGFTSPNSLLELYVQQTNTLDQALNKSG
                     YSEETQKLIKLYLVAILAISSGARRIKSEGAPSGASRTFEYDPNALDNLKSAIRSIDP
                     KGCAESLLPKDKVVGFFDVVGGC"
     gene            9180..9524
                     /locus_tag="PXD18_001114"
     CDS             9180..9524
                     /locus_tag="PXD18_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301557.1"
                     /translation="MSNLSNWSYTAKATLWQAKGKNDDGVLVFSTPQIISCDYGADRK
                     RARFEIGREQAVKNVIWTEFAHAKLGDYVLIGESEQADPILAGAEEIIHIQRFADTFD
                     RNRDDFALITGG"
     gene            9526..9894
                     /locus_tag="PXD18_001115"
     CDS             9526..9894
                     /locus_tag="PXD18_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HDL6301558.1"
                     /translation="MGIKVKGIRQVKQRLNQVVGEVQSQKATRAMFRILNAVAPLAAH
                     YTPVDTSTLINSQFTEMEVNGTRLIGRVGYSANYAAYVHDPNIKQNFRKPSAKKEFLT
                     SALNESKATIKSIVKEELSL"
     gene            9891..10271
                     /locus_tag="PXD18_001116"
     CDS             9891..10271
                     /locus_tag="PXD18_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301559.1"
                     /translation="MISYVKAFKQWLEAHSLADGYVVQLYQWEDTQKAKPVIVIQPNS
                     GSPQVSDLSSEHYLLISLVAGKNSGYTIEERARAIMSKILVEPFASFGYIESMGGLPA
                     PIFTEDNRMIFRLPLRIISTNQEE"
     gene            10275..10757
                     /locus_tag="PXD18_001117"
     CDS             10275..10757
                     /locus_tag="PXD18_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6301560.1"
                     /translation="MGSPSPQNNAENLVVGRAVVLEYGTTDAKPQESEWKVAGAMTTK
                     SWDFSPNSVTSEADDAGGFPETLITNSDFSISGDGEWRKRPKSKELGIKDLVVLYANA
                     VKNRTQPYIWVRLKYAGLTILGKMVITALSSEAPTNDLVKFSIEFKVGDSSTIEIAAA
                     "
     gene            complement(10797..11213)
                     /locus_tag="PXD18_001118"
     CDS             complement(10797..11213)
                     /locus_tag="PXD18_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HDL6301561.1"
                     /translation="MFYPALFTPAEEGGFVVTFPDLPEAITQGDTFEEAMEMAEDVLL
                     SCVEIYFDEDRRFPLTRPVNTDEVPVFMPESIYAKVLLHNTMQEQAVSKAEIARLTNI
                     RPPEVQRILAPRHITKIDTIGRILASLGKPLQLSLG"
     gene            complement(11269..11445)
                     /locus_tag="PXD18_001119"
     CDS             complement(11269..11445)
                     /locus_tag="PXD18_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010848235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HDL6301562.1"
                     /translation="MKQSEFLRWLKANGVEVENGSKHLKLYYKGKRSHLPKHPSQELK
                     TGLVEGVKKQLGLK"
     gene            11541..12212
                     /locus_tag="PXD18_001120"
     CDS             11541..12212
                     /locus_tag="PXD18_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301563.1"
                     /translation="MKMVSYPITEIGEMLIATDGRDFLFRPSFKNIYKIGSPQEIVKI
                     YALLHGCEIREILPHILTKSESHQSYFWSVLNSPVFGRKILQNAMIVMSCCCDDDISL
                     LIGEWLPSKSGVRYKLGKMPPETIINFAKNLMGHGVIGCCELPKKEQSAKNEFSESFD
                     AVEYISLARTHFNMSREDAENLTMTELQQLLKSQMPAENNSYGQFTEEEYDRIMAEYE
                     KRRAA"
     gene            complement(12227..12460)
                     /locus_tag="PXD18_001121"
     CDS             complement(12227..12460)
                     /locus_tag="PXD18_001121"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301564.1"
                     /translation="MKKDCTKQDFANWLNENQEVCWIKEVSIERILSCVDDYVAICNA
                     RSKDEFELLNDIRELFYSAHYKDFTPVLSGRFF"
     gene            12629..13087
                     /locus_tag="PXD18_001122"
     CDS             12629..13087
                     /locus_tag="PXD18_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301565.1"
                     /translation="MKKMIVFVASVLSSFVIASDWEIIEAAQNKVKAELIRKSEKKAE
                     LCLNVAQAVLITNQKVQKDTFSMCGEFSTEIVFSDSKAYSLAVCGKVKGKDIIGNPIE
                     SDYIYQRATKDFYFNYNGKKSAYYDPQSDLARLQEVSDSMFNAMQNRYCK"
     gene            13155..13550
                     /locus_tag="PXD18_001123"
     CDS             13155..13550
                     /locus_tag="PXD18_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301566.1"
                     /translation="MDVKVINVLLIILFSAIVIGLFLFQESRLRDPNNHSVIYLEQIQ
                     EMCSLDKIGSYQIDFVRQSGNEYKESILVNDFELAIKTVLSTLRRAKIDSVSVISNTP
                     NLFIIHRAFYNARGSQEGKKLGSIRIAKI"
     gene            13637..16132
                     /locus_tag="PXD18_001124"
     CDS             13637..16132
                     /locus_tag="PXD18_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail length tape measure family protein"
                     /protein_id="HDL6301567.1"
                     /translation="MSQAVFYLNNFKELFMTVEVGGVVITADLEFENLLRDTQKVDKA
                     MDDIGKSTLKAEKGLKGLETQATKTAIAVNQATNKMKNIRGVAGQLGYQIQDISIMLQ
                     MGSNASTVIAQQGSQILSIFGPMGAVAGAILAISGAIGGALLPSLFDSTDATELLAAA
                     QKNLSEVVTQTESGVSALSAKIIKLAKVSEDAAKAKIAVAMSDAKIAIKAAGDSSQKA
                     FEQFDGFFGSFTNSSQSIRNAIDELKRYESKGKDVGAVIKELGGTYGGAIAEINALDS
                     VTSEMSKTLGITQSEALGLIKLLAQLEQDKSPDNIKLLAIALSDLSDKNGWANEELNK
                     LTRTINDNSVSALDAETSVRLLESAIKDLQNAIQNSQGALDGNVAKMNQLADAAERKA
                     ATIGKTERETAKYAATLLATTDEAKKNLDSTLSRIDASYDQIEAYQAEQKALQDKKTA
                     DAKAAREAEAAAKKSAQAKKQVVEQLRQMATQYEIAVLRQKGMHLEAVKLEAGMRLGA
                     AATKEQREEAEKLAQSIYGATAASQNFNAIQAQASPVTALDQRHQQQLAQIEEYKILY
                     PQKIMEAEAARAAIEEQYRQQRMEAQWEEWKQASDGARMFGDAVDAVGSSATSTITGL
                     LNGTMSVRDAFASIANTILNSVVQSLVEMGMAQVKQMIMGQTAAKASMAAQMVQAKAL
                     AASFAPAASMVSLATQGANAIPAQAAITSTMSMAQVAAVTGRKLGGPVSARQMYRVGE
                     NNQPEIFKASNGMQYMIPGQSGRVFSNKQSQGQGGGESKTVAVIVNQTNHFSSDEASA
                     NQAAVAKALSNQIKASVRLELQSQMRAGGVLAR"
     gene            16136..16465
                     /locus_tag="PXD18_001125"
     CDS             16136..16465
                     /locus_tag="PXD18_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6301568.1"
                     /translation="MQTFNFKVEQDYTVQNEPSVVILKFADGYEQTAPKGLNHNLKKY
                     QGITVKANKAEAVKIQQFLNAHGGYKKFNWRDRTSDETVTVRCRSWSSTKLGAVIEFT
                     LNFDEVI"
     gene            16487..16933
                     /locus_tag="PXD18_001126"
     CDS             16487..16933
                     /locus_tag="PXD18_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL6301569.1"
                     /translation="MASELIKLEQDALIELWEIDLTHIYSSSNPNQRGEIFRFHNGVS
                     QTQQNIWWQGNEYQAYPIAADGFEISGQGPSNRPTLTVSNLYGVVTVLVEDFGQPVEA
                     KVSSEETVDGNIQMTVELLKKMDQIADQRYRRNQLNDLRTGGTLSK"
     gene            16941..17657
                     /locus_tag="PXD18_001127"
     CDS             16941..17657
                     /locus_tag="PXD18_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL6301570.1"
                     /translation="MPISISNQMKLDLAKLEQNAMLDLYEVDLRKLQDKDGNAGGVYR
                     FYSGLNELKTSVVWQGRTYDPYPIEATGFERNSSGPSNRPTLTLSNLFGLVTGIANQF
                     DECIGAIVRRHQVYAQYLDAVNFAGGNAKADPNQEIISHFVIEQLTSLTRETATFTLA
                     LPIETDNAKIPSRIIMADTCTWIYRSAECGYTGKQYFDEKDKATSDPKADKCSHCLNG
                     CELRGNQRNFGGFVSVNKLG"
     gene            17661..18392
                     /locus_tag="PXD18_001128"
     CDS             17661..18392
                     /locus_tag="PXD18_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL6301571.1"
                     /translation="MELEQQIIDYALQHEPHEMCGFVVFDGNKNRFIPCENQAEDKAN
                     YFEISDLDYIKAEEKGELVAVVHSHPEPNGKPVLSTLDRKMQVQTGLDWWLVHNRQIH
                     KFRNVPHLIGREFKHGTMDCYTLYRDAYMLAGYEMDEFERQDDWWHTGQNLYLDNIQG
                     QGFERVETPQIGDVILMQVGADVPNHAAIYIGEQMVIHHSPNRLSKRDLYDGYWLRHT
                     HSIWRHKLAEKLDFDGILNDIAVNN"
     gene            18661..19251
                     /locus_tag="PXD18_001129"
     CDS             18661..19251
                     /locus_tag="PXD18_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDL6301572.1"
                     /translation="MITVKFYGHLRKFGTDFRLEVKDTAEAIRALCSQLTGLRETLRD
                     GIYKVRIGKQYLDASALEKGLFYCLKKGQTIHFTPVIKGAKSGGVFQAVLGVALIGAA
                     FFLGPVGWGVLGASSAMMMGAMGASMLLGGVAQMLTKMPNAPNIGNEKEKENSTSFSN
                     LNNLVAQGKPVPLAYGLIRTGSLVISQGVETMTVEV"
     gene            19254..>21688
                     /locus_tag="PXD18_001130"
     CDS             19254..>21688
                     /locus_tag="PXD18_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HDL6301573.1"
                     /translation="MGLFSRKRKNHTPKEAPETGRSKQIVNIVELLCEGEIEGLVDGF
                     KSIYLDGTQIQNDDGTYNFNNVSGQLNVGTQDQEVLEGYDSSQNEVSVGVEVKKKNGA
                     IVRTVTDERISRLRLTLGVRSLFRQNNQGDTNTTNVDLKITIGTRQYSHSFNGKYSSQ
                     YLESVVFDNLPSVPFNISVERVTEDSNSQRLQNGTIWSSYTEIIDTEFTYPNSAVAGI
                     SFDSEYFNNIPTRNYLIKAKKVKLPSNYDPVKRTYTGFWDGTFKVAWTNNPAWEIYDL
                     APILSKMLGVEISFDKWALYDVSRYCDQLVPDGMGGQEPRFTCNVWLTEVKTAYDLLN
                     DFCSVFRAIPIWTGTEVSVIIDRPRDPVWTYTNANVVSGFERSYSARKSRHNAVQVTY
                     SDKTNGYESAIEYVSDDEEIKKHGLNLSQVTAFGCTSRGQAYRTGKWILETEKREKET
                     ITFTVGREGLMHLPGDIIRVADSHYAGTEIGGRVLAINGRKVTLDREISIDNASYFTY
                     INGEATHSSIKIQSVNGKEITLDSTPTGLETYGVWSLSTKQISSGLYRSISIVENADG
                     TNTITALQHEPQKEAIVDNSAHFVETARTLYKAPQINAVEVSTGYDGKLYITGDISSG
                     DGKLTYDIKITKDGNLYQYKKGLSDPNIELSDLPNGDYTVIIYGKNAKGQIVTEKTQT
                     FTIDRPPAPTGVVVTGGLGQITLEWDWVNEVTQTEIFAAETDNFALAKKIAKVTARTY
                     AHTLKGNKVVRYYWLRHTRGINVGPFYQQQGVRGQTAVDLDARLTELNTQLSRNIVNE
                     VFDVAAPARGLELV"
BASE COUNT         6745 a         4286 c         5086 g         5571 t
ORIGIN      
        1 gggaacagta ttctagcaga atttttaacc aaagctcagt ctcacgactg ggctttttta
       61 ttgcctcgaa acggggtgga gtatgaagtt aatgaaagat atgggaacgc agagctatat
      121 ttggtcggga tttagcactt ggctggcgtg gctcggcgaa cagcagaatt taatgttact
      181 tagtcttgct atcggtattg ttactgccat tgcagggctt attcagcgat ttgatgaatg
      241 gcgtaggcgt aagcgtgaag atgagcgagc ggaagagctt catcaagcga aaatggcaag
      301 attgagaaag gggttaagtg atgagtaaaa gccttaaata tggcagtggt atcgtttgtg
      361 gtatcgctgc cattattaca ttagtccaat atcaacatcc cgaaatccgc actaaccaag
      421 ctggattaga gattatcggt aatgctgagg gttgcagacg tgatccgtat aaatgccctg
      481 ccgatgtaat cacggttggc attggctcaa cggagtttgg cggtgaaaag attgacccaa
      541 atcgtattta ttctgacaaa gaaattgctg agcgttgggc aaaagatttg aagattgcgg
      601 agagttgtgt caatcgtcat tttaatggta aagacatgaa cgataatcaa ttttcgggaa
      661 tgacgtccgc tgtatttaat atgggttgtt ataacatgag attttatcgg aataaacaag
      721 gtcaatatgt gcagactacc atccataaac tcgcagtgaa taaacaattt gaggagatgt
      781 gtcatcgact acctgacttt attcgtgcca gtggtaaggt attgaacgga ttggttatcc
      841 gccgtgaaaa ggagaaagca ttatgcttaa ctggattagt ggcacgatag ccattgtgat
      901 tttgggcttg tgtgtatggt tatggggtca gtcacagatg atagatagct taagagctga
      961 gaaccgcgca caagcccaaa ccattgagca gcagcaaaaa gccaatcaac ggctaaccga
     1021 tagcttagag caagagcgac aagcggtcga aaaaatccaa aaaattgcaa atgagctgcg
     1081 gaataaagtg gagatggcca agaatgaaat tacatcaata ctggcacaag acagttgtgc
     1141 taaagctgat ttgcctaatg gcgttgctga tagcattaag cggctgcacc agcagaacaa
     1201 tcacaagcac tgagtatttg tatccgccgg cagcttacct tgtgccgtgt gggcgaacag
     1261 aatttagcgg tagaacctat ggcgatacgg ttgagtatct cgtcaaagtg atgggagagc
     1321 gtgatttgtg tgctaatcaa attgaccgta tcagagaatg gcaagcacaa accaaacaag
     1381 ggtttaaata gctaattatc taattaaccg ctattgaaaa tgggagcgta acagctccct
     1441 ttttgttttg atggaaagta aatattacat aatttagcta tggtttcggg gttggttgga
     1501 taaaacaccg aggaaatacc taagtgatgt gatttatata aaacaaaacc ccgaacattt
     1561 gcggtgttcg aggttttttt attacccatt gaaacggaat gagtaacaag ttatggaaat
     1621 tattacattt ttaaccgtaa ccatcaagga gattcttatg gaatatggtt tatggcaaat
     1681 aagcctagca gtaacagtcc ctattttggc gttcgtgtcg ccaaagctga ttaatgctat
     1741 tgctaatcta ttaaatgcaa tgaagtaaag gaatttaacc caatgactaa aaaaggcgag
     1801 gttaaagcca cgtctaaagg cgtgggtaaa ttaactgata aacagaaacg atttgtagaa
     1861 gagtatctca ttgacttgaa tgcgactcaa gctgctatta gagctgggta cagcgaaaaa
     1921 acagcatact caatcggaga agagaacctg agaaaacctg aaatcagaag tgcaattcag
     1981 gaggctcaaa ataaacgctc ggagagaacc caaattacac aagatgatgt gctaaatggg
     2041 ttgcttgaag tgattgcaat gagtactggt aaaaaaattg tgacagaaac tgatgttgcg
     2101 aaaaatgaaa atggcgagtt agtcggtttt gatattgcaa aaacaaagtt tgaacctgct
     2161 gctgcgaata aagctcttga gttactcggt aaacatttag gaatgttcaa agataaggtt
     2221 gatttaatta attctgatgg ttcactgaat cgaccgatgg tgattgaatt aattgctccg
     2281 agtttagacg atgaaagcac agattgaact accacctaaa ctgttgcctg tttttgccaa
     2341 agattatcgt tacaaaggtg cttatggtgg gcgaggttca ggcaagactc gggcatttgc
     2401 caaaatgtcg gcagtgtctg cttataaaag agcaatgcaa ggggaaagtg gcgttattct
     2461 ttgcggtcgt gagtttatga actcattgga agaaagctct cttgaagaag ttaaacaggc
     2521 gatcaagtct gagccttttt tagcaaattt ttttgatgtc ggcgagaagt atgttcgcac
     2581 taaagatggg cggatttctt atgtgttttc cggacttcgg cataacttag atagcatcaa
     2641 atctaaagcc cgtattttga ttgcgtggat agatgaagca gaaacagtaa gcgaaactgc
     2701 ttggcggaaa ttaattccaa ccgtgcgtga gaataattcc gaaatatggg taacttggaa
     2761 cccggaaaat agagggagcg caacagatac tcgcttcagg caaaatccac ctgaaaacag
     2821 ctgcataatt gaaatgagtt accaagataa tccttggttt cctgatgtgc tcgagcaaga
     2881 gcggctaaat gacaaacagc ggcttgatga tgcgacttat cgctggattt gggaggggga
     2941 ctacttagaa tcctctgatg ctcaaatctt tagagataaa taccaagaat tagaatttaa
     3001 gccgaaccct gattttgatg gcccatatta cggcttagat tttggtttcg cgcaagatcc
     3061 gacggcggcg gtcaaatgct gggtatttaa tggcgatctg tacatcgagt ttgaagcagg
     3121 caaagtgggc ttagaacttg acgacaccgc agactttatt gccaaaggcg tgccacaaat
     3181 tgccgatcac gttgtgcgtg cagattcggc gcgtcctgag tcaattagtt acctcaaacg
     3241 tcacggctta ccgcgcatta tcggcgtgga taagtggaaa ggctcggttg aagatggcat
     3301 tgagcatatt aagtcctacg gcaaagtctt tattcaccca cgctgtcagc aaacgctcaa
     3361 cgaatttcgc ctttattcgt acaaaaccga ccgcttgtcg ggcgatgtat tgcctgtcgt
     3421 gattgatgcc cataaccact ttattgatgc gctacgctac gccttaacgc cgttgatgca
     3481 agttaaaagt gccaaaggag ttttactatg agcctagagc aagacagact ggctttttta
     3541 gccgaagccc tagggcttgg caatatcaaa cgaagaacgt tatggaagga gtttggctac
     3601 cctaatacct taacattcaa ccatttctta aaagcctata agcgcaatag tatcgctttt
     3661 gcagcgatta accgcttact tgacggttgt tgggttgact gccccgtaat cgttgagggt
     3721 gagcaaaaga acgaatcaaa gcagacaacc gaatgggagt ccaaagttga acgttttatg
     3781 aaacgctact ggtcggcaat caaagaggca gatagacgaa accttgtcgg taactattcg
     3841 gcgttattac ttcaagtaag agatggtcaa caatgggatc agcctatttt gcaaggcgcg
     3901 ctatctagca ttggagagtt cggactggtt aaactgatcc ccgtgtggca gtcacagctt
     3961 tcagtgacag agtttcaaga ggatgtgacc gccgataatt acggcgaacc gctgatgtat
     4021 caattcagcg aatctgcctt tggcaaaaaa agcgtgtcac gaaatatcaa ggttcacgca
     4081 agtcgtgtaa ttttgctcaa tgagggtggc gactttaatt cccctcattc tggagttcct
     4141 ctgcttgagg cgggttacaa caagctagtt gatctcgaaa aaacatcggg cggcagcgcc
     4201 gaaggttttc tgaaaaacgc aagccgacaa ttagggatca aattaacaaa agatgttgat
     4261 ttgagacagc tcgaagacag cgcaaaagcc cttgggtttt cttcattttc tgatgcgttg
     4321 aacgacaaga tcaagaaaat caactcagga acagactcag ccttgattac tcacgaaggt
     4381 gatgcctctg tgttgtcagt cgcaccagca gatccgaagc caacgtggga aatttctgca
     4441 aatgagtttg ccgcctcagt acaaatccct ttcacgattt tgttcggaca gcaaacaggg
     4501 cgattggcaa gtgacgagga caaaaccgac tgggcaaacc gttgcaacgg tcgtcgaaat
     4561 ggttttctca ccgatgtgat aacacaacta cttaatcgct tgtggttcat cggtgtgcta
     4621 cctatgccaa aaaatagcga tgtcacagtg tcttggtctg acttacttgc accaagcgaa
     4681 aaagagaaaa tcgcaaacgc acaggctttg gcttcagttg caactacatc gcagtctgcc
     4741 tttggttttg ccgcggtaac agcgaacgaa atccgcgaat ctttagggtt tgaacctctg
     4801 cctgataatc tgattccgcc aacaattgac gacgaaaatg aagatcaaga cgaaaatcaa
     4861 gccactgcgg attccgacaa ataaagccga tccgctcaat atgggagtgt cggttgccaa
     4921 gctatttcgt cacattgatg tcatttactc acaaattaag cgctccatta agcaacaaat
     4981 cttgcaaaag atgtcactgc gactgcaagc aaataatttt gagtattttc cttcgtatct
     5041 tactgcgact gagttggcgg atttgcttga aaccttgcaa aagattatcg acaaagagat
     5101 tttgtcgaat ggttctcaag gcgaaaatct ctggtttgac tcctatatcg acgaagcagc
     5161 actaaaaggc actcagtctg cggtcactga tttaggtctg caatcagagg cttatcgcag
     5221 tcagcgaaac ttatcatcaa tcgttttcag tcctgcgtac ttcaatcgat tggcgattgc
     5281 acacatggca agttatagcg agtggcaagg tttaagcgac gagttgcgaa aatctttggc
     5341 gggggtgatc acggaggcgg ttttaaacgg caaaaacgtg aaagaaactg cccgtgagat
     5401 tcggcaaaaa cttgatgtgt catcaaaacg ggcgaagcga atagcgcaat caagccagtt
     5461 ggcggcatat cgtcgggcag aatggcaaga ggcggaagag gcaaaagaag aacttgggct
     5521 aaacaccaag ctcttacatt tttcagcgct caaagctact acgcgattag cacacgccca
     5581 acgccacggc aaatacttcg atgttgcaga ggtgcgcgaa tggtatagcc gagacggcaa
     5641 ccaattcaac tgttactgca agcagtctgt ggttgtggtc aatgccgacg gtaaaacaga
     5701 tattgagcct ctccttgttg ggttggctaa agaacgtaaa caatgggtag gagcattaaa
     5761 aaatgtcaaa aaataacgtg aacatcgtca ccgtcattaa cagcaaaaat atcagcacag
     5821 aatctattga cggagatcaa cacctgatta tccgcggcgt tgtgccgatt gttgatgatg
     5881 ttgtgatgaa cgacggactt tatcctgcgg atgaaatcaa taaaagctac aacagcttag
     5941 agggcaactt tatgccgctt gggcatccaa aaatcgaagg taaatacgtt tcagcccaag
     6001 atgttcgagc ggtgaacaaa catcacgtcg gtgcgtgggc gaagaacgta cgcaaggaaa
     6061 gtggcaaagt gctggtcgat atgtatatca accgccgctt tgcggaaggt tcagaacagg
     6121 gcaaaacctt gcttgaacga cttgacggaa tggtgacaaa caccaacgct gaacctattc
     6181 acgtttccac agggctgatt ctaaacaaag tcaagcaatc gggtaaatcc aaaggcaaga
     6241 aatatagctg gattgcgaca aatatgtcgt tcgatcatat tgcaatattg cttgatgtgc
     6301 cgggcgcggc gacacctgat gatggcgtgg ggatttttgt aaaccaagac ggaagcgaaa
     6361 tgggggtgga aaatgtaaac ctaacacaag cggcggatta ccgcacagaa aagctgtttg
     6421 acaaagtacg attttacctg atggcgaact cagatttatc gtttgaagaa attcatcgcg
     6481 cgctgcgtga agctattcgc cccgaaggca aagataagtg gtcattttgg gtcgaagctg
     6541 tttacccgaa atacttcatc tattcggacg ataacagcgg caagaaatac aagcggagct
     6601 attttattga cgaaaatgac aatgtgcaac tcactagcga acctgtcgaa gttgtcaaga
     6661 agattggcta cgaagaaatt acaaccaatg aggaacataa tccaatgaaa accaaaatct
     6721 tagccgtgtt gaatgcggca aacgtgaaaa cggaaggctt aaatgacgat cagctcttgg
     6781 aagcctacaa caagctgcaa gcggataagg gtaaagagcc tgaaaagcct aaaaatgaag
     6841 atgacagcga aattgatgag aaaatcaaga aagcagtcaa tgccgcgatt gagccactcc
     6901 agcaagcctt gcaagctaat actgacaaag agcaagcagc aatgcgtgcg gcggtgaaag
     6961 ccaagttcaa tatgagcgat gccgcagtca atgctttgca aggcgaggta ttaactgagt
     7021 tgtatgcgca aacgcaacaa tcggtcggat taaacaataa ttcggccaac ggcaacggcg
     7081 acaatcaatg ggatggttac tcactcaacc aagaggagaa aggcaatgag taatgtaatt
     7141 tatcgcggtt cggtcaagcg tgaacctcaa acggtgaata tcgtgatcaa cgatacttcg
     7201 gcaccgggtg cagtagttaa actccacaac ggcaaattag aggcggcggc tgatttaaaa
     7261 ggtcgccgtt ttttattggg caacaaccgc tttaaggggc agacaatcga acaagcgtat
     7321 gcgaagggcg atactgcaac ggcgtttcgt ttagagcctg aacaggagta ttacgcgcaa
     7381 attgccgacg gcacttataa ctttggcgat gaactcacgg taaaacaagc gggcggcaaa
     7441 ctgaccaaag cggagacggg cgatgtagtg ctatttttct tcgacgaaga atcgcagcgt
     7501 gtaatcagtg gcggcaaagg ctatgccgat gtcgtggtgg caaacgccta cactaaataa
     7561 gaggtaacaa agcaatgttg aaattcacaa aagaacaaga acgcttcgtg attaacgagc
     7621 ggatcaatta cgacaaaaaa cacgcgctaa tggcagcaaa ttcggcgggg ttattgggca
     7681 acgcgatgac tttgccgaaa gatgtctggg cggaatggga tcgtgatgca gtgcaaattc
     7741 agcgcgaaga attggtggtg tttaacgatt tagcgggcat ttcaaaatca atgccgattg
     7801 gcaaacttat tcaccatttc caaacggtat ctgatagcgg ttcggttaat atctcattag
     7861 acggtcgttc atcagcgaaa accgataacg tggtgcttaa ctaccacggt acaccgttgc
     7921 cgattattga ttccactttc tcttttggct ggcgcgatat gtcggcagct caaagcgaag
     7981 ggtatcagat cgacggtgca gcacgcgcga acagtctccg caaggtggct gaaaaaatgg
     8041 aagatctcgc tttaaatggt gattcctcta ttgtggttgg caatgccaag ctttacggct
     8101 tgcgtactgc gccaaatcgt atgactaaca cacacaatct ggatttagcc actgcgacac
     8161 cgaaagaaat ttacgatgtg ttccgtgact tgattagcaa attccacgcg aagaactact
     8221 actctcctgt aacgctttat gtgaactatg gcgactattt cgcaatgagt acacgtgatt
     8281 actccgagca gaaatccgaa ggatctatct tgaacaaagt gatgacgatt ccgcaaattg
     8341 cgaaaatcgt gccagcaagc cgtgtaccgc aaaatgaaat tctcggcttg tgcaagcgtt
     8401 cggatgtgta ccaagtgctt aacggtatgc cgttagtgac tcgtccgatt gcgcgccata
     8461 atgaaaccga tgattactcg ttccaaatta tggcagccgt tgccgtggag ttcaaattcg
     8521 acgataaagg caatgctggc tatatccagt acactaaatc ctaaggcggt gcaaaatgaa
     8581 gtggctatta acacacgata gccacgagtt gaagaaaggc gatgtttacg aaggcgaaac
     8641 attaccgctt tggcttgtgg gcaaagctat cgaaatcgaa gaaaaatcct ttgaagttgc
     8701 aacgccttct gatcacgctg acggcgaaac tggcgaaact ggcgaaactg gcgaaactgg
     8761 cgaaactggt cagaaaggca aaaaagataa aggcaaataa ctatggcagc agaaatagag
     8821 ctatccgaag cgcgaacaac gcttgacgaa ctgggtttca cttcgccgaa ctctctgctt
     8881 gagctttacg ttcagcaaac gaacacctta gaccaggcgt tgaacaaatc ggggtacagt
     8941 gaagaaacac agaaactgat caagctctat ctggttgcta ttcttgcaat ttcatctggg
     9001 gcgcgccgta taaagtcaga aggtgcgcct agcggtgcaa gccgaacgtt tgagtatgat
     9061 ccaaacgcgc tagacaacct taagtcggcg attcgctcaa ttgatccgaa aggttgcgct
     9121 gaaagtttgc tacccaaaga taaagttgtc ggctttttcg atgtggtcgg aggctgctaa
     9181 tgtcaaattt atcgaattgg tcctacaccg caaaagccac gctttggcag gctaaaggaa
     9241 agaacgatga cggcgtttta gttttttcta cgccacaaat catttcctgt gactacggtg
     9301 cagatagaaa gcgcgcacgt tttgagattg ggcgtgaaca agcggtcaaa aatgtgatct
     9361 ggacggagtt cgcccacgcc aaattaggcg attatgttct gattggcgaa agcgagcaag
     9421 ccgatccgat tttggctggc gcagaggaaa ttattcatat acagcgcttt gctgatacgt
     9481 tcgaccgcaa tcgtgatgat tttgcgctga taacaggcgg gtaaaatggg gatcaaagta
     9541 aaaggcataa gacaggtcaa gcagcggctg aatcaggttg ttggcgaggt tcagagccaa
     9601 aaagcaactc gggcaatgtt tcgcattttg aatgcggttg cccctcttgc ggcgcactat
     9661 acgcctgttg atacctcaac gttgatcaac agtcaattca ctgaaatgga agtgaacggc
     9721 acacgcttga ttggaagagt gggttattct gctaattatg cggcttacgt tcacgatcct
     9781 aatatcaagc aaaacttccg caagccttca gcgaagaaag agtttttgac ttccgcgctg
     9841 aacgaatcaa aggctacgat caaatccatt gttaaagagg agttgtcact atgatttctt
     9901 atgtcaaagc cttcaaacaa tggttagagg ctcactctct tgcagacggc tatgttgtgc
     9961 agctttacca gtgggaggat acgcaaaaag ccaagcctgt tattgttatt cagccaaata
    10021 gtggttcgcc gcaagtttct gacctgagca gcgaacacta tctgctaatt agccttgttg
    10081 caggtaaaaa ttcaggttac acaatcgaag agcgagcaag ggcgattatg tcaaagattt
    10141 tagttgagcc tttcgcttcc tttggttaca tcgaatcaat gggcggatta cccgccccaa
    10201 ttttcaccga agataatcga atgatttttc gcttaccact tcggattatt tcaacaaatc
    10261 aagaggagta gtttatgggt tctccatctc cacaaaataa cgcagaaaat ctcgtggtgg
    10321 ggcgtgccgt agttttagag tacggtacga ctgatgcaaa gccacaagaa agcgaatgga
    10381 aggttgcggg cgcaatgacg acaaagagtt gggattttag cccaaattcg gttacatcag
    10441 aggctgatga tgctggcggc ttccctgaaa ccttaattac aaactcagac tttagtattt
    10501 ctggtgacgg tgagtggcgc aaacgaccaa aatcgaaaga actaggcatc aaagatctag
    10561 ttgtgttata cgcaaatgcg gtaaaaaatc gcacccaacc ttacatttgg gttcgtttga
    10621 aatacgcagg cttaacaatt ctcggaaaaa tggttatcac tgcattaagt agcgaagccc
    10681 caaccaatga cttagtgaaa ttctctatag agttcaaggt tggcgattca agcactatcg
    10741 aaattgctgc agcgtaaaaa atcccaccct ctataacaag agcggtggga ttatcattat
    10801 cctagggata gttgtagggg ctttcctaag ctagccaaaa tacgaccaat agtgtcgatt
    10861 tttgtaatat ggcgaggggc taaaattcgc tgtacttctg gcggacggat attagttaat
    10921 cgggcaattt ctgccttgct taccgcttgt tcttgcattg tattatgcaa aagcactttt
    10981 gcgtagatgc tctctggcat aaacacaggc acttcgtcgg tatttactgg gcgagtgagc
    11041 ggaaagcgtc tatcttcatc gaaataaatt tcaacacaag atagtagcac gtcttctgcc
    11101 atttccattg cttcttcaaa tgtatcgcct tgggtgatag cttctggcaa atcaggaaat
    11161 gtcactacaa agcccccttc ttcagcgggg gtaaataacg ctggataaaa catattttct
    11221 ccttattcaa gggtgtagtg aaagcccctt aacatcaggg gctttatatt attttaagcc
    11281 tagttgcttt ttaacccctt ccactaagcc tgtttttaac tcttggcttg ggtgtttggg
    11341 gaggtggctt cttttgccct tgtagtagag tttcaaatgc tttgatccat tttcaacctc
    11401 taccccatta gcctttagcc accttaggaa ttcgctttgc ttcactacct cctcctattt
    11461 gtttaacttg ggttcattat atgcaaaaat gctaactttg tcaacagaaa gttagcaaaa
    11521 atgctaattt ttttgttgag gtgaaaatgg ttagctatcc aattactgaa attggtgaaa
    11581 tgcttattgc aaccgatggg cgagactttt tattcagacc gagtttcaaa aatatctaca
    11641 aaattggaag cccacaagaa attgtaaaaa tctatgcact attgcacggc tgtgagattc
    11701 gagagatatt gccgcacatt ttaaccaaat cggagtctca tcaatcttac ttttggtcag
    11761 tgctgaattc gcctgttttt ggcagaaaaa ttctgcaaaa cgcaatgatc gtgatgtcgt
    11821 gctgttgcga tgatgatatt tccctgttga ttggcgagtg gttgccgtca aagtctggcg
    11881 ttaggtacaa gttgggtaaa atgccacctg agacaattat caattttgca aaaaatttaa
    11941 tgggtcacgg agtgattggt tgctgcgaat tgccaaagaa agaacaatct gcaaaaaatg
    12001 aattttcaga aagttttgat gctgttgagt acataagttt agcccgaact catttcaata
    12061 tgagccgcga agacgctgaa aatctcacga tgaccgaatt gcagcaactt ctaaaaagtc
    12121 aaatgcctgc cgaaaataat agctatggac agttcaccga agaagagtac gacagaatta
    12181 tggcggaata tgagaaaaga agagcggctt aaatagccgc taacatttaa aagaacctac
    12241 ctgatagaac gggagtgaaa tccttgtaat gtgctgaata aaaaagctct cttatgtcat
    12301 tgagtagctc aaattcatct ttggatcttg cgttgcagat tgccacatag tcatctacgc
    12361 aggataaaat acgttcaata ctgacttctt ttatccagca tacttcttgg ttttcattca
    12421 gccagttggc aaagtcttgt ttagtgcagt cttttttcat aagttctcct ttttgattat
    12481 ttgcaaaaaa aatcatatca aatcatccgt tgttatctat tggcgaaaat aatttttgcg
    12541 acacagatcg caaaaatagg ttttgacggt ggaaaaacga atcttaattc gtagaatggt
    12601 aaaatttctt tatttttaag gtatttttat gaaaaaaatg attgtttttg tagcttctgt
    12661 tttgtcatct tttgttattg catcggattg ggaaataata gaagcggctc aaaataaggt
    12721 gaaagcagag cttataagaa aatcagaaaa aaaagcagag ttatgtttaa atgttgctca
    12781 ggctgtctta attactaatc aaaaagtgca aaaagatact ttctcaatgt gtggtgaatt
    12841 ttcgacagag attgtctttt ctgactctaa agcatatagc cttgcagtat gtggaaaggt
    12901 taaaggtaaa gatattatcg gaaatccgat agagagcgac tatatatacc aaagagcaac
    12961 taaggatttt tactttaatt ataatggcaa aaaatcagct tattatgatc ctcaatctga
    13021 tcttgcaagg cttcaagagg tctcagactc tatgtttaat gctatgcaaa atagatattg
    13081 taagtgatgc ttgcattggt ttttaaatat ttaactcaaa taatttatgt gtttttagtt
    13141 taatagggcg atttatggat gtaaaggtaa ttaacgtctt actaattatt cttttttcag
    13201 caattgtaat aggtttattc ctttttcaag aatcaagatt aagagatcca aacaaccatt
    13261 cagtgatata tttagagcag attcaagaaa tgtgcagctt agataaaata ggctcatacc
    13321 agattgattt tgtacgacaa agtgggaatg agtacaaaga gagtattctt gttaatgatt
    13381 ttgagttagc aataaaaacc gtattatcca cgttaagaag ggcaaaaata gatagtgtgt
    13441 cagtaatatc taacacacct aatttattta ttatccaccg agctttctac aacgcaagag
    13501 gtagtcaaga aggaaagaaa ttaggatcga taaggattgc aaaaatttaa tgtaacaaaa
    13561 atatagatta aattgtattt aaccaatcta ttgctagata aattgtaaaa aaatcacaga
    13621 aataaccgct tgtgctatgt cacaagcggt tttttattta aataatttta aggaattgtt
    13681 tatgacggtc gaagttggcg gagttgtaat taccgcagat ctagaatttg aaaatctgct
    13741 aagagatact caaaaagttg ataaagcgat ggatgacatc ggaaaatcaa cattaaaagc
    13801 agaaaaaggg ctgaaagggc tagaaacgca ggcaaccaaa acggcgatag cagtaaatca
    13861 agccacaaac aaaatgaaaa atatccgtgg agtagcaggt caacttggtt atcaaattca
    13921 agacatctca ataatgcttc aaatgggttc taacgcttca accgttattg ctcagcaagg
    13981 gtcgcaaatc ttaagtattt tcggtccaat gggagctgtt gcaggggcga tcttagctat
    14041 tagtggtgct attggtgggg cgttactccc tagtttgttt gattcaactg atgcaactga
    14101 gcttttggca gcagctcaaa aaaatctcag cgaagtagtt actcaaacgg aaagtggtgt
    14161 ttccgccctt tctgcgaaaa tcattaaatt agcaaaagta agcgaagatg cagcaaaagc
    14221 aaaaattgca gtagctatga gtgatgcaaa aatagctatt aaggcagcag gggattcatc
    14281 acaaaaggca tttgagcaat ttgacggctt ttttggatcg tttacaaatt caagtcaaag
    14341 tattcggaac gcaattgacg aattaaaacg ctatgaatca aaaggtaaag atgttggtgc
    14401 cgtaataaaa gaacttggag gcacatatgg tggtgcaatt gccgaaatta atgcgctgga
    14461 ttctgtgaca agcgaaatgt ctaaaacgct tggtattact caatctgagg ctcttggttt
    14521 gataaaactg ttggctcaat tagagcaaga caaaagccct gataatatta aattactcgc
    14581 gatagcttta tctgacttaa gcgataaaaa tgggtgggcg aacgaagagc taaataagct
    14641 aaccagaacg ataaacgata attcagtatc tgctttagat gccgaaacat cagtaagact
    14701 cttagagtct gctataaaag acttgcaaaa tgcaatccaa aactcccaag gtgcattgga
    14761 tggcaatgta gcaaaaatga atcaacttgc agatgcggca gaaagaaaag ctgcaacgat
    14821 aggcaagact gagcgtgaaa ctgctaaata tgcagctacg ctattagcta caaccgatga
    14881 agctaaaaaa aatcttgatt ccacattaag taggattgac gcatcatacg atcaaatcga
    14941 agcctatcaa gccgaacaaa aagccttaca agataaaaag accgcagatg caaaagctgc
    15001 cagagaagct gaagcggctg caaaaaaatc cgctcaagcc aagaagcaag ttgtcgaaca
    15061 gttgcgacaa atggctacac agtacgagat tgctgttttg aggcaaaagg gaatgcatct
    15121 cgaagccgta aaattagaag ctggtatgcg tttaggagct gcggcaacaa aagagcaacg
    15181 agaagaagct gaaaaactag cacaaagtat ttatggagca accgcagcaa gtcagaactt
    15241 taacgctata caagcccaag catctcctgt tactgcatta gaccaacgac atcaacaaca
    15301 gctagctcag atcgaagaat ataaaatctt gtatccacaa aaaataatgg aagcagaagc
    15361 tgcgagagct gcaatcgaag aacaataccg ccagcaacga atggaagctc aatgggagga
    15421 gtggaagcaa gcgagcgacg gggcgagaat gtttggtgat gcggttgatg ctgttggttc
    15481 aagtgcaaca agcacaatta cggggctact aaatggcaca atgtccgtgc gtgatgcttt
    15541 cgcatcaatt gcaaatacga tcttaaatag tgtagtacaa agccttgtcg aaatgggtat
    15601 ggctcaagtt aagcaaatga ttatggggca aactgctgcc aaggcttcta tggcggcgca
    15661 aatggtgcaa gctaaagcgt tagctgcttc atttgcaccc gcggcctcta tggtttctct
    15721 tgccacacag ggggcgaatg ctattcccgc tcaagctgcg atcacgtcaa ctatgagtat
    15781 ggctcaagtc gccgcggtga caggtcgtaa acttggcggc cctgtatcag ctagacagat
    15841 gtatcgtgtc ggcgagaaca atcagcccga aatcttcaaa gcgagcaatg ggatgcaata
    15901 tatgatcccc ggtcaaagcg gtcgtgtatt cagcaacaag cagtcgcaag gtcaaggtgg
    15961 aggcgaaagc aaaacagtag ctgtcatcgt aaatcaaacc aatcacttta gcagcgatga
    16021 agccagtgca aatcaagcgg ctgttgcaaa agcattgagc aatcaaatca aggcttccgt
    16081 gagattggaa ttgcagtcac aaatgcgagc tggtggagtt ctagcgaggt aatcaatgca
    16141 aacatttaat ttcaaggttg agcaagacta cactgttcaa aatgagccca gtgtcgtcat
    16201 actaaaattt gccgatggtt acgagcaaac cgctcccaaa gggttaaacc acaatctgaa
    16261 aaaataccaa ggcattaccg taaaagcgaa caaagcagaa gcggtgaaga ttcagcaatt
    16321 tctcaatgct cacggtgggt ataagaaatt caactggcgc gatagaacaa gcgatgagac
    16381 ggtaacggtt cgttgcagaa gctggagctc cactaaatta ggtgcagtca ttgagtttac
    16441 acttaatttc gatgaggtga tttaatgcca aaagcccccc aaaaaaatgg catcagagtt
    16501 gataaaactc gaacaagatg ccctgattga gctgtgggag atagatctca ctcacatcta
    16561 ctctagctca aacccaaatc agcgcggaga gatattccgc tttcacaatg gcgtgagcca
    16621 aacacaacag aacatctggt ggcaaggcaa tgaataccaa gcatacccga ttgccgccga
    16681 tggttttgag atttcgggtc aaggaccgtc aaatcgtcca acactcactg tctctaacct
    16741 gtacggtgtt gtcacggtat tagtagaaga tttcgggcaa cccgtagagg cgaaagtcag
    16801 cagtgaagag actgtagatg gcaatatcca aatgacggtg gaactgctga aaaaaatgga
    16861 tcaaatcgcc gatcaacgct accgtagaaa tcagttaaat gatttaagaa caggtggaac
    16921 attatctaaa taggtgaagt atgccaatta gtatttctaa ccaaatgaaa ctcgaccttg
    16981 ccaaacttga gcaaaatgca atgcttgatt tgtacgaggt agatttgcgt aaattgcaag
    17041 acaaagacgg caatgccggt ggggtttatc gtttttactc gggtttaaat gagctgaaaa
    17101 ccagcgtagt ttggcaaggg cggacttacg acccttaccc catcgaggca acaggatttg
    17161 agcgtaacag cagcggccca agcaatcgcc ctactcttac gctatcaaat ctgtttggct
    17221 tagttacggg tattgctaat cagtttgatg agtgtatcgg ggcgattgtt cgccgtcatc
    17281 aggtttacgc ccaatattta gatgccgtga attttgccgg gggtaatgcg aaagctgatc
    17341 caaatcagga aataatcagt cattttgtga ttgagcagct taccagcctc acccgagaaa
    17401 cggcgacctt tacgctggca ttaccgattg aaactgataa tgccaaaatc cccagcagaa
    17461 ttattatggc ggacacctgc acttggattt accgctcggc ggaatgtggc tacaccggca
    17521 agcagtattt tgatgaaaaa gacaaggcaa catcagaccc aaaagccgat aaatgcagcc
    17581 attgcctgaa cggttgtgaa ttgcgaggca atcagcgtaa ttttggtgga tttgtatcgg
    17641 tgaataaatt ggggtaatga atggaattgg aacaacaaat aatcgactac gccctccaac
    17701 acgaaccgca cgaaatgtgc ggctttgttg tttttgacgg caataaaaat cgatttatcc
    17761 cttgcgaaaa ccaagcggaa gacaaagcca attactttga aatctccgat cttgattaca
    17821 tcaaagcaga agaaaaaggc gaactggtag cagtagtgca ttcgcaccct gagccaaacg
    17881 gcaagccggt actctctacc cttgatcgca aaatgcaggt acagaccggt ttagattggt
    17941 ggctagtgca taatcggcaa atccataaat tccgcaatgt accacattta atcgggcgtg
    18001 agtttaaaca cggcacaatg gattgctaca cgctctaccg tgatgcctat atgcttgccg
    18061 gttacgagat ggacgagttc gagcgacaag atgactggtg gcataccggg caaaatctat
    18121 atttggataa tattcaaggg caaggtttcg agcgagtaga aaccccacaa atcggcgatg
    18181 tgattttaat gcaggttgga gctgatgtac ctaaccacgc agcgatttat attggcgaac
    18241 agatggtaat ccatcacagc ccgaaccgat tatctaagcg tgatttatat gatggctact
    18301 ggttacgcca tacccacagt atttggcggc ataaactggc ggagaagtta gattttgatg
    18361 gcatattgaa tgatattgct gtaaataact aacaaaaaat gaccgcttgt aacaaaaaca
    18421 aaccccgaag cgtttgcagc acttcggggt ttttcatatc cacttaccta actaagagga
    18481 cataaattaa atgaatgata aacgatttac attcaaattt ctaggagttc ttatggaagc
    18541 aattaatatt accccaaaag aaatcagaaa aacaatgtgg acagccgcaa taattctctt
    18601 tttgtttgcg ttcatctgga aagcccctga atttatcact gctattcgtt ggtggtaact
    18661 atgattacag ttaaatttta cggacatctt agaaaattcg gtacagactt tagacttgaa
    18721 gttaaagaca ccgcagaagc catcagagcg ttatgctcac agcttacagg cttgcgtgaa
    18781 acgttgcgag acggtattta taaagtccgc atcgggaaac agtatttaga tgcctcagcc
    18841 cttgaaaaag ggctttttta ttgcctgaag aaagggcaaa ccattcattt tacccctgtt
    18901 atcaaagggg cgaaaagcgg gggtgttttc caagctgtgt taggtgtagc cttaattgga
    18961 gccgcatttt ttctcgggcc ggtcggttgg ggagttctag gggcttcttc cgcaatgatg
    19021 atgggagcaa tgggggcatc aatgttgctt ggaggagttg ctcaaatgct caccaaaatg
    19081 ccgaatgccc cgaatatcgg taatgaaaaa gagaaagaaa actcaacgtc tttttcaaat
    19141 ttaaataact tggtggctca aggcaaacct gtgccgttgg cttatggctt aattcggacc
    19201 ggctcgcttg tgatttcaca gggagttgag acgatgactg tagaggtata attatgggat
    19261 tatttagtcg taagagaaaa aatcatactc ctaaagaagc accggaaacc ggtcgctcta
    19321 aacagattgt aaatattgtg gaattgctgt gcgagggcga aattgaaggc ttggtagatg
    19381 gctttaaatc gatttactta gacggcacgc agatccaaaa cgatgacggc acctataatt
    19441 ttaataatgt gagcggtcag ctaaatgtcg gtacgcaaga tcaagaggta ttagaaggtt
    19501 acgacagctc acaaaatgaa gtgagtgtgg gtgtagaagt caagaaaaaa aacggtgcaa
    19561 tcgtccgcac cgttactgat gaacgcatca gccgtttgcg tttaacgttg ggcgtgcggt
    19621 cactattccg tcaaaataat caaggcgata ccaataccac caatgttgat ttaaaaatca
    19681 cgattggcac acggcaatat tcgcatagct ttaacggcaa atacagctcg caataccttg
    19741 aatctgtggt gtttgataac ctgccgtctg taccgtttaa tatctcggtt gaacgtgtaa
    19801 cagaggatag caattctcaa cgactacaaa acggtacaat ttggagcagc tataccgaaa
    19861 ttatcgacac cgaatttact taccctaatt cagcggttgc cggtatcagc tttgattcgg
    19921 agtattttaa taatatcccg acccgaaact acctaattaa agcgaaaaaa gtcaaattgc
    19981 caagcaatta tgatccagtt aaacgcactt acaccggctt ttgggacggc acatttaaag
    20041 ttgcgtggac gaacaaccct gcttgggaaa tttacgattt agctccgatt ttaagcaaaa
    20101 tgcttggggt tgaaatcagt tttgacaaat gggcgttgta tgatgtttcc cgctattgcg
    20161 atcaacttgt gccagatggt atgggcggac aagagcctcg ttttacctgt aacgtatggc
    20221 tcacggaagt taaaactgcc tatgacttgt tgaatgattt ctgctcggta ttccgtgcga
    20281 ttccgatttg gaccggcacg gaagtctccg tgattatcga ccgtcctcgt gatccggttt
    20341 ggacttatac caacgctaat gtagtcagcg gttttgaacg ctcatattct gcccgcaaat
    20401 ctcgccataa tgcggtacaa gtgacctatt cggataaaac gaatggctat gaaagtgcga
    20461 ttgagtacgt ttcagacgat gaagaaatca aaaaacacgg cttaaattta agccaagtaa
    20521 ctgcctttgg ctgtacatct cgtgggcaag cataccgtac cggtaaatgg attttagaaa
    20581 ccgaaaaacg agaaaaggaa accattacct ttaccgttgg acgtgaaggc ttaatgcact
    20641 tgccgggcga tattatccgt gttgccgaca gccattatgc cggtacggaa attggcggac
    20701 gtgtactggc gattaatggg cgaaaagtta cccttgaccg tgaaattagc attgataacg
    20761 ccagttattt tacctatatc aacggtgagg caacgcactc tagcattaaa atccaatcgg
    20821 taaacggtaa agaaattacg ctggatagta caccaaccgg cttagaaacc tacggtgttt
    20881 ggtcgttatc gactaaacaa atcagctctg gattatatcg ctcaatctcg attgtcgaaa
    20941 atgcggacgg cacaaacact atcacagcgt tacaacacga accgcagaaa gaggcaattg
    21001 ttgataactc cgctcacttt gtggaaacgg ctagaacact ctacaaagct ccacaaatta
    21061 acgcagtgga agtctcgacc ggttatgacg gtaagctcta cattaccggt gatattagct
    21121 ccggtgatgg caagctaacc tatgatatta aaattaccaa agatggcaat ttatatcaat
    21181 acaaaaaagg cttaagcgat ccgaacattg aactaagtga tttacctaac ggcgattata
    21241 ccgtcattat ttacggcaaa aacgccaaag ggcaaatcgt caccgaaaaa acacaaacct
    21301 ttactattga tcgacctcca gctccgaccg gtgtagtagt aacaggtgga ttagggcaaa
    21361 ttaccctcga atgggattgg gtaaatgagg ttacgcaaac cgagattttc gcggccgaaa
    21421 ccgataattt cgcccttgca aaaaaaatcg caaaagtgac cgctagaacc tacgctcaca
    21481 cactaaaagg taacaaggtt gtacgctatt attggctacg tcataccaga ggcattaatg
    21541 tcggaccgtt ttatcaacaa cagggggtaa gaggacaaac agcggttgat ttggatgctc
    21601 gattaaccga attaaacact cagttatcac gcaatattgt taatgaggtt tttgatgttg
    21661 ctgcaccggc aagaggttta gaattagt
//
LOCUS       DANLXD010000037        21620 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.037, whole genome shotgun sequence.
ACCESSION   DANLXD010000037 DANLXD010000000
VERSION     DANLXD010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 21620)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21620)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21620
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.037"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(47..122)
                     /locus_tag="PXD18_001131"
     tRNA            complement(47..122)
                     /locus_tag="PXD18_001131"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(87..89),aa:Asn,seq:gtt)
     gene            complement(238..987)
                     /gene="moeB"
                     /locus_tag="PXD18_001132"
     CDS             complement(238..987)
                     /gene="moeB"
                     /locus_tag="PXD18_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HDL6301574.1"
                     /translation="MELTDHEMLRYNRQIILKSVDFDGQEKLKASRVLIVGLGGLGCA
                     ASQYLASAGVGHLTLVDFDLVSLSNLQRQILHTDATIGQPKVESAKARLAAINPNIQI
                     ETINQRCSDEQLAKLIANVDLVLDCTDNVTVRNQLNLQCFKQKRPLVSGSAIRFEGQV
                     SVFCYQEQEPCYECLSRLFGDATLSCVEAGVIAPIVGIIGSIQALEAIKVLLNIGRTL
                     SGKLLMIDGLHFSVREMALPKQNNCPVCTSY"
     gene            complement(1086..2315)
                     /gene="moeA"
                     /locus_tag="PXD18_001133"
     CDS             complement(1086..2315)
                     /gene="moeA"
                     /locus_tag="PXD18_001133"
                     /EC_number="2.10.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDL6301575.1"
                     /translation="MALLALSDALDNMLARLSTPKLVEQLPLNECANRVLAEDIFSPI
                     NVPNFDNSAMDGYAVRISDLAQNLTLNVAGKAFAGNPFNGEIKAGECVRIMTGALVPK
                     GVDAVVMQEETTLNSDGSVTFNHIPKLGSNIRRIGEDVKQGALVLKKGSLLNVASLPL
                     LASLGIASVPVFVKLKVAILSTGDELTSVGEPLSEGKIYDTNRFAVRLMLEKLNCEIL
                     DFGILPDDPILFEQTFRQAQQQADVLITSGGVSVGEADFTKDVLEKLGEIGFWKIAMK
                     PGKPFAFGKLEQAWFFGLPGNPVSALVTFYQLAQPALAKLSGLSTDKIAKLTQNLTAC
                     SAGKLKKAVGRQDFQRGYYYANEKGELEVRAVGTQGSHIFSAFNESNCFIVLEAERGN
                     VDAGEKVTIQPFNSLMY"
     gene            complement(2337..2954)
                     /locus_tag="PXD18_001134"
     CDS             complement(2337..2954)
                     /locus_tag="PXD18_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006719828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HDL6301576.1"
                     /translation="MFDSLAVQFVVLWAVIDPIGSVPVYLAKTIGLPIEARRKIALNA
                     VLIAAGILIFFLIGGQVLLESMQIPLPAFQAAGGLVLLLFALTMIFGESKPEQEMRIS
                     SNLNELAVYPLAVPSIASPGAMMAIVLLTDNHRFHIGDQIITAGIMLLVLFITYLLLL
                     AANRIQHLIGNAGAAIISRVMGLILAAIAVNNLLIGVRDFFVQIS"
     gene            complement(3022..4233)
                     /locus_tag="PXD18_001135"
     CDS             complement(3022..4233)
                     /locus_tag="PXD18_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDL6301577.1"
                     /translation="MISRQMQSLLKRLVAQFPAVLVTGARQVGKSTLLQHIGEGYQYI
                     TFDDPMLLELAKQESRLFFLNHQGKLILDEVQYVPEIFALLKLEIDKKQQNGLFLLSG
                     SQAFELMQNVSETLAGRIAILKLQGLSLREILGVKFDQPFLPTTDYLLAREQELKSPE
                     NIWQLIHKGDMPRLYAQEVDWEIYYRSYVATYIERDVRQLTNIASTTDFTRFMVSIAS
                     RSGELLNYSNIAQEVGVSNETIKRWVAILQTSGIIYLLQPYHNNHLKRAIKTPKVYFL
                     DTGLMAYLTKWLTPETIAQGAKSWQFFETFVVSQIIKSFHNQGIEPPIYFYRDTNQKE
                     IDLIIEYDRTLYPIEIKVTASPTKKMAKSFDLLNSVSSEWKLGQGAIINQYPTKLYLS
                     ENLVALPVSYL"
     gene            4430..6361
                     /locus_tag="PXD18_001136"
     CDS             4430..6361
                     /locus_tag="PXD18_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6301578.1"
                     /translation="MIFFTDLILKRGHSVLIDNSSVTIHTGQKVGLVGKNGCGKSSLF
                     ALLKNELQPEGGDVSLPKNWAISWVNQETPALAISALDYVIQGDREYTHLMAELDIAN
                     EKNDGNRIAIIHTQLDTIDAWTIQSRAATLLNGLGFSTEQLQLPVKSFSGGWRMRLNL
                     AQALICRSDLLLLDEPTNHLDLDAVIWLERWLSNYRGTLLLISHDRDFLDPIIDRVIH
                     IEHQKLNEYTGNYTSFEIQRATKIAQQNAAYQQQQRKVAHLQSFIDRFKAKATKAKQA
                     QSRIKALEKMELIAPAYADSPFEFEFRPPLALPSPLLMMEKVSAGYAEKTVLESVKLN
                     LVPGSRIGLLGRNGAGKSTLIKLLAGELPPQNGSIQLAKGVQLGYFAQHQVDTLRFDE
                     SPLWHLQKLAPEKTEQELRNYLGGFDFKGDKVVQAVKSFSGGEKARLVLALIVWQRPN
                     LLLLDEPTNHLDLEMRQALVDALTYYEGSLVVVSHDRHLLRSTVNEFYLVHDRKVEKF
                     KGDLDDYQKWLNEQNALANEPKSVLAKDSANSTACSSTNENSAAQRKEQKRLEAERRQ
                     QTAPLRKKITQLEKELEKATEKLNKLEAMLTESDIYEAENKAKLTETLAKQLEAKRLV
                     EEIEMQWLEAQEEFETMLR"
     gene            6640..6897
                     /locus_tag="PXD18_001137"
     CDS             6640..6897
                     /locus_tag="PXD18_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6301579.1"
                     /translation="MKNLRLSIHSSEHIWLRELFLKRRLELGLTQRTLGEKMGVLYSF
                     IGKVETGDRRLDIFEFIAYCKGLDLDPLSVLQEIEQQFPHK"
     gene            complement(6944..7564)
                     /locus_tag="PXD18_001138"
     CDS             complement(6944..7564)
                     /locus_tag="PXD18_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HDL6301580.1"
                     /translation="MKLWYSTTSPFARKALAVIKHHQLDDKVEMLRVTKAMDPNSPHN
                     QDNPLGRIPALQRNCGRWLFGSLLISEYLDQKGNNTPLLPKEGKPRWAVLALHNLADG
                     IMENTMPTLLQERMARPENEWWVSRHEQLMERNIRSFRQLEEALQEFGTELNLGTLTA
                     VALIDWWAFRLDKIGYDLAKNYPNLTAWAEEMNNKYAILAETKPSM"
     gene            complement(7566..8219)
                     /locus_tag="PXD18_001139"
     CDS             complement(7566..8219)
                     /locus_tag="PXD18_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HDL6301581.1"
                     /translation="MTPTLPICYQHRDFIIINKPEGLSVHKDEAEIGLTELVARQLNV
                     KQVWLVHRLDKITSGLLILALNKEAAARFYHLFEQHKIYKTYWALSDKKPKKKQGRIV
                     GDMQKSRNGAWKLCHSKENPAVTQFISHSVEDSLRHFILQPKTGKTHQLRVAMKSLGS
                     PILGDKLYSGSQADRVYLHAYQLDFEYENEKISVQALPTSGHFWQKICKSNHIKHGE"
     gene            8268..8927
                     /locus_tag="PXD18_001140"
     CDS             8268..8927
                     /locus_tag="PXD18_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDL6301582.1"
                     /translation="MAVTIYLVRHGRTVWNLEGRLQGSGDSALVEEGIIGAKKTGIAL
                     KHIPFTAAYSSMQKRAQDTANYILAENERSNIPHFHHKGLNEFDFGSWEGMKSVDLQE
                     NDEYWVMKRTPAEYLAKANGGERFEQLYQRVTQAFNQIAELHQNDGKVLIVSHGMTLT
                     LLTAVLKGIAWQDFRNEEKHSFVFNTAITKVEVENGKVTVLEFNNTDHLDNVPTSQYK
                     R"
     gene            complement(8964..10010)
                     /locus_tag="PXD18_001141"
     CDS             complement(8964..10010)
                     /locus_tag="PXD18_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HDL6301583.1"
                     /translation="MSKQIFNEEELKTTEHFEPKQEFDLENAIIEEEEKAVEAELIIE
                     ESLKPSRFWIRVLLATLALFGVAVIAQSIQWLIDTFQQREWIYFAFSIVFFIVSLLGV
                     GAIISEWRKLVYLRNHQKNQQMSNQLLLEQLPSNDGEQAVKFCENIANQLNHLPSIAQ
                     AEQLWKSELNEAYNAKEVLYLFSENVLKPIDKQVKQMISRNAAENAVIVAVSPLAIVD
                     VLLMAARNIALVNKITKAYGMELGYISRLKLFKMVLKNMVFAGATEIATDVGMDFFSQ
                     NLTAKLSLRAAQGIGVGLLTARLGIKAMEFCRPVAFQANEKPRISAIRQELLTSVKNT
                     VFAKTETKEKVFSD"
     gene            complement(10010..10963)
                     /gene="dusC"
                     /locus_tag="PXD18_001142"
     CDS             complement(10010..10963)
                     /gene="dusC"
                     /locus_tag="PXD18_001142"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(16) synthase DusC"
                     /protein_id="HDL6301584.1"
                     /translation="MNPIPNVILAPMQGVLDPFVRNLLTSVNDYDLCISEFVRVVDQR
                     LPKKTFYRLAPELYQGGLTDSGTPVRVQLLGQHPQWLAENAALAIELGSHGVDLNCGC
                     PSKTVNGSNGGASLLKDPELIYRATKAMREAVPSDKIVSVKVRLGWDSVSQCFEIADA
                     VEQGGANEITVHGRTKVDGYRAERINWQAIGEIQQRLSIPVIANGEIWDFESAKNCQK
                     ITACKALMMGRGALNTPNLSKVVKYNVPKMAWNEVLQLLFKYVQMENQFDTGFYHVAR
                     IKQWLRYLDKEYPQAVELFDILKTEHGYDGLKAHIEKAVEE"
     gene            complement(11041..11667)
                     /locus_tag="PXD18_001143"
     CDS             complement(11041..11667)
                     /locus_tag="PXD18_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2238 domain-containing protein"
                     /protein_id="HDL6301585.1"
                     /translation="MDSRSHIIPLFLAIVITVIAVWSGLNPTDRAVWYAEVIPIFIVF
                     ALLIITYPKFQFSGLAYFLMSLWLIMHLIGAKYTFANVPFEWANQFLTPILGEDRNHF
                     DRVAHYIIGFYSFPMAEWLLRKRKCGMGVAFFFSLFFIMSVAAAYEIIEWQYAVIEGG
                     NAGVEFLGSQGDIWDAQKDMLADTLGALTALMIYLIARPDLRIHDRHF"
     gene            complement(11667..12524)
                     /gene="djlA"
                     /locus_tag="PXD18_001144"
     CDS             complement(11667..12524)
                     /gene="djlA"
                     /locus_tag="PXD18_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone DjlA"
                     /protein_id="HDL6301586.1"
                     /translation="MQFIGKIVGFFLGYQLFHGLFGGILGAFIGHLADKKLYELGSVR
                     SSLFGKNLTRQSLFTQTTFAVLGHIAKAKGRVTEADIELARALMARLKLDSAAQQLAQ
                     NAFTLGKEPDFPLRQVIQEFREACGARTDLLRFFVEVQMQAALQDGQLDVNEQQILFT
                     IAETMGMSRFQFEQMIAMIMAAQQFRNGGYYQQNGSYHQQSQGGYQGSYQQPAQPSIE
                     AAYTVLGVTAQDDQNTVKRAYRKLMNEHHPDKLAAKGLPDEMMELAKEKAQQIQAAYD
                     LICKVKEWK"
     gene            complement(12572..13282)
                     /locus_tag="PXD18_001145"
     CDS             complement(12572..13282)
                     /locus_tag="PXD18_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6301587.1"
                     /translation="MWKNRQLFFGYAENRLLLLSRSITGLLGILCGVYIIDHLVLSDV
                     DMIGKLTSFILIILSAIFLKERASLLQWILCLIAFIGALFIIKPAVDIRFMPYLVGVI
                     GSVFAAIAYLCLRLLAKTKKVESPNTIVFFFSAFSTLILLPFVAIDYVVLTNLQTIYL
                     VLAGVTSAVGQFCVTTAYKYAAAKDISIYSYASVLFSAILGLLFFEQYPDMLSWLGYA
                     IIFVSSWLMFVLTKKQSK"
     gene            complement(13518..14003)
                     /locus_tag="PXD18_001146"
     CDS             complement(13518..14003)
                     /locus_tag="PXD18_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDL6301588.1"
                     /translation="MKKFAKVLMVAVPAFALAACSSSSDDAAANAAANAAANAAANAA
                     GEFGGLTAEQLKAQYNTVYFGFDSYAVEGEYRQLLDAHAQLLAKTQGNVTIAGHADER
                     GTPEYNIALGQRRADAVKGYLAAKGANNTSTVSYGEEKPAVLGHSEADYAKNRRAVLE
                     Y"
     gene            complement(14030..15316)
                     /gene="tolB"
                     /locus_tag="PXD18_001147"
     CDS             complement(14030..15316)
                     /gene="tolB"
                     /locus_tag="PXD18_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HDL6301589.1"
                     /translation="MKLFSRISGVIGIFSALLTTQVVADSDVRISIDEGVSMAQPIAV
                     VPFKASGVPADVAQIISDDLRNSGKFTPLERSQMPAQPGSAAEVVADQWSAIGIDNIV
                     VGQVSSTGGGYNVAYQLIDTLGTSGTAGGVIAQGSFIVPAAQIRQGAHTVSDEVFEKL
                     TQIRGAFRTKIAYVVQRGVSSYELRVSDYDGFNAFTITTSKEPLMSPEWSPDGSRLAY
                     VTFENKKAQVVVHDIRSGARRVVAALKGHNGAPSFSPDGSRIAFASNQDGELNIYVVG
                     SGGGTPSKLTANAGNNTEPSWSPDGSTIYFTSDRAGSPQVYRMSSSGGGASPMGGSGS
                     YNAKVSSDGKNLIMIAGDRVVKRDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTKG
                     TSKVLQLVSADGRFKANLPGAGGHYKFPAWSPYLTK"
     gene            complement(15332..16555)
                     /gene="tolA"
                     /locus_tag="PXD18_001148"
     CDS             complement(15332..16555)
                     /gene="tolA"
                     /locus_tag="PXD18_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HDL6301590.1"
                     /translation="MKSQQDRLELAVIVSILLHILLIGLLLLGSLFTKTELAAAGGSG
                     GDSDSFEAVMVDTGQVAAEYGQLLAEKKGSKASKPKVEPKEEAVEEDVEDKPTPEEIQ
                     KQKQAELAAIQEKQRQQEIERQQKLQEQQKQEQAKQEELKKQQAEEATRKKAAEAAKL
                     KADAEAKRLEAAAKQAEEEKKAKEALEKKLEQQKKAEAEKKLKEQKELKEQQAKEAKE
                     AKEKAEKEAKAKAEKEAKEKAEKEAKAKAEKEAKEKAEKEAKAKAAAEAKAAQAKNNK
                     ALDDFLNSGDIGGGSSKGGNKNSAGSQGSGGTSGLGQGTNVDGNAYGQRIKKLIQSRY
                     RVDPSFAGKQCDVKIFLSRDGTITNYQVISGDKAVCDAAVSAIVATRKVPPAPSDAVY
                     NMFKSPTLDFSLKVK"
     gene            complement(16569..17006)
                     /gene="tolR"
                     /locus_tag="PXD18_001149"
     CDS             complement(16569..17006)
                     /gene="tolR"
                     /locus_tag="PXD18_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin uptake protein TolR"
                     /protein_id="HDL6301591.1"
                     /translation="MSRRLKRNDIKSEINIVPFLDVLLVLLLIFMATAPIISQSVEVN
                     LPEDTHSQSVSNEDKTPVILEVAGVGEYKLKIDGNYVQSNGQENINESEVVAYAGEQF
                     QKDNNTLFLVAGDKVVPYEEIMKGITLLKDAGVKSVGLMTEGK"
     gene            complement(17148..17828)
                     /gene="tolQ"
                     /locus_tag="PXD18_001150"
     CDS             complement(17148..17828)
                     /gene="tolQ"
                     /locus_tag="PXD18_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolQ"
                     /protein_id="HDL6301592.1"
                     /translation="MQTEFSLLSLFLEASIVVKIVMLILIVFSILSWAVIIQRSKILT
                     KAKKDSLAFEDRFWSGEDLNRLHQGLENRRDALNGSEQIFYVGFKEFTRLQQANPDAP
                     ESIIQGSTRAMNLALNREMESLENYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAV
                     KQATLQSVAPGIAEALIATAIGLFAAIPAVMAYNRLNLRLGKVEQGYVNFIDEFTTLL
                     HRQAFSKR"
     gene            complement(17850..18251)
                     /gene="ybgC"
                     /locus_tag="PXD18_001151"
     CDS             complement(17850..18251)
                     /gene="ybgC"
                     /locus_tag="PXD18_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HDL6301593.1"
                     /translation="MDFPIRVYYEDTDAGGVVYHSNYLNFFERARTEFLRQQHFSQQE
                     LFSQSLAFVVKRIEIDYKLPARLDDLLNVETTLSELKKATLIFKQRLWKDGDCLSEAN
                     VTVACVDLIKMKPVAIPDDIRQALQKSYFSI"
     gene            complement(18414..18701)
                     /gene="ybgE"
                     /locus_tag="PXD18_001152"
     CDS             complement(18414..18701)
                     /gene="ybgE"
                     /locus_tag="PXD18_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyd operon protein YbgE"
                     /protein_id="HDL6301594.1"
                     /translation="MIHKLYNLTAKGLLKALSFILAAVLFATIWVNSTAFALSFGGKT
                     PYLAMLVFYGMAILWVHGIGFEIRAAIWKVIFLPLLGYLIVIPALWILLVK"
     gene            complement(18701..18799)
                     /locus_tag="PXD18_001153"
     CDS             complement(18701..18799)
                     /locus_tag="PXD18_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CydX/CbdX family cytochrome bd oxidase small
                     subunit"
                     /protein_id="HDL6301595.1"
                     /translation="MFYVTWVLGVLLAIFFATVITISIEKTGKFDE"
     gene            complement(18814..19947)
                     /gene="cydB"
                     /locus_tag="PXD18_001154"
     CDS             complement(18814..19947)
                     /gene="cydB"
                     /locus_tag="PXD18_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDL6301596.1"
                     /translation="MIDYEILRFIWWILIAVLLIGFAITDGFDMGVLNLLPIIGKSNV
                     ERRIMINTIAPHWDGNQVWLLTAGGAIFAAWPTVYATSFSGFYIAMVLVLAALFFRPV
                     GFEYRAKIDNPKWRSAWDWGLFIGGFVPSLVFGVAFGNLLQGVPFEFNNINQSQYTGS
                     FFGLLNPFALVCGIISLMMLTTQGATWLQMKTTDELHNNSRKVAQVTASIVLVAFILA
                     GVWLYFKDGFVITSELDHNAQSLLTNKTVAVQAGAWFRNYAEMPVLWVVPALVVVGAL
                     LTIIASKANRSGLAFFSSSLMIVGVILTAAVSMFPFIMPSITHPEMSLTVWDATASHT
                     TLTVMLFVAGIFVPLVLAYTIWSYIKMYGRLDASYLEENKAAY"
     gene            complement(19960..21510)
                     /locus_tag="PXD18_001155"
     CDS             complement(19960..21510)
                     /locus_tag="PXD18_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDL6301597.1"
                     /translation="MLDVVELSRLQFALTALYHFLFVPLTLGLSFVLVVMETLYVTTG
                     KEVYKDMTKFWGKLFGINFALGVTTGITMEFQFGMNWSYYSHYVGDIFGAPLAIEGLM
                     AFFLESTFVGLFFFGWERLSKAKHLLATYCVAFGSNFSALWILVANGWMQNPIASEFN
                     FETMRMELSSFSELVLNPVTQSKFLHTVTAGYVCGAIFVLGISSYYILKGRDLGFAKR
                     SFSVGASFGLIAIISVLIMGDESGYEIGKAQPTKLAAMEGEFETQPAPAAWNAFVIPN
                     TAEMKNEFSIHIPYAAGIIATRSLDKEIKGLKDIRVINEQRVRTGMVAYGLLEKLRSG
                     NYTEADKEAFKAVQKDLGFGLLLKQYTPNVVDATEEQIQKAADNTIPNVGPTFWAFRV
                     MMLSGFLMLILITTAFIQNMRGKVESSRFLLRGLLFGLPLPWIAIESGWFLAEYGRQP
                     WAIYEMLPVGVSNSALTTGDLWFTIGLLCGLYTLFLVVEMYLMFKYGRLGPSALKTGR
                     YYFEQSTK"
BASE COUNT         6626 a         4784 c         3936 g         6274 t
ORIGIN      
        1 tataaaagga gacaaataaa acaagaacaa aagaaaaata aaatcttggc tcctcctgcg
       61 ggactcgaac ctgcgacata tggattaaca gtccaccgtt ctaccgactg aactaaggag
      121 gaattaacgg tgtaaataat aggctaaaac gttttagccg tcaaataaaa aaaataaact
      181 gtcgttcatt ttttacattt cttgacattt tttcgccaat aagtatgaga aaaatactta
      241 ataagaggta caaaccggac agttattttg cttaggtaat gccatttctc tgacagaaaa
      301 atgcaagccg tcaatcatta acaattttcc ggaaagagtt ctgccgatat taagtagcac
      361 tttaattgct tccaacgctt gaatactgcc tatgatgcca acaatcggag caatgacccc
      421 cgcttcaaca caacttaaag tcgcatcacc aaacaacctg cttaaacatt catagcacgg
      481 ttcttgttct tgataacaaa atacactcac ctgcccttca aatcgaattg ccgaaccgga
      541 aacaagcggt cgtttttgct taaaacattg caaatttaac tgattacgca cagtaacgtt
      601 atcggtacaa tccagcacta aatctacatt tgcaatcagc ttggctaact gctcatcgga
      661 acatcgctga ttgatagttt caatctgaat gttcggatta atcgccgcta atcgagcttt
      721 ggcagattcc acctttggct gcccgatagt cgcatcggta tgtaaaattt ggcgttgcag
      781 attagaaagt gagaccagat caaaatccac caaagtcaaa tgcccaacgc cggcagaagc
      841 taagtattgc gatgccgcac agcccaaacc acctaaaccg acaatcaaca ctcggctggc
      901 ttttaacttt tcctgcccgt caaaatccac gctttttagg ataatctggc gattataacg
      961 tagcatttcg tgatcggtaa gttccatttt tacacctaaa gagtaaacga tggcgcaagc
     1021 gtccacgctt gtgcctatat ttttattgct agcacaagcg tggacgcttg cgctatctta
     1081 attcattaat acatcagcga attaaacggc tgaatagtga ctttttcccc agcatcaaca
     1141 ttgcctcgtt ctgcttctag cacaataaaa cagttacttt cattaaaagc gctgaaaata
     1201 tgtgagcctt gcgtgccaac tgcacgaact tctaactcac ctttttcatt ggcatagtaa
     1261 tagccccgtt ggaaatcttg gcgaccgacc gcttttttca attttccggc actgcaagcg
     1321 gttagatttt gggttaattt tgcaatttta tctgtcgata aacccgaaag tttggctaac
     1381 gccggttgcg ctaattggta gaaagtcact aatgcagaga cagggttgcc cggcagccca
     1441 aaaaaccaag cctgttctaa tttaccgaat gcaaaaggct tgcccggctt catcgcaatt
     1501 ttccagaaac cgatttcgcc taatttttcc agtacatctt tggtaaaatc tgcctctccc
     1561 acagatacgc cgccactggt aatcaacaca tcggcttgct gttgggcttg cctgaaagtt
     1621 tgctcaaaca gaattgggtc atcaggcaaa atcccaaaat ctaaaatctc gcagttgagt
     1681 ttttccagca ttaaacgcac cgcaaaacgg ttggtgtcgt aaatttttcc ctcactcaaa
     1741 ggctcgccaa ctgaggttaa ttcatcgccg gttgaaagaa ttgccacttt taattttaca
     1801 aaaacaggca cagaagcaat accgagtgaa gctagcaacg gtaaactggc tacattcaat
     1861 aatgagcctt ttttcaagac caatgccccc tgtttaacat cttccccaat gcggcgaatg
     1921 ttactgccta attttggaat atggttaaag gttacagagc catcggaatt taacgtagtt
     1981 tcctcttgca ttacaacggc atcaacgccc tttggcacta atgctcccgt cataatccgc
     2041 acgcattcgc ctgcctttat ttcgccgtta aacgggttac cggcaaaggc tttaccagcc
     2101 acattcaagg ttaaattttg tgctaaatct gaaatacgaa ccgcgtagcc gtccatcgcc
     2161 gaattatcaa aattcggtac attaatcggg gaaaaaatat cctctgccaa cactcggtta
     2221 gcacactcat ttaacggaag ttgttccacc aatttaggtg tcgataaacg agcaagcata
     2281 ttatctaacg catcactcaa agccaaaagt gccataattt cctacctatt caacgtttag
     2341 ctaatttgta caaagaaatc ccgtacgcca atcaacagat tattcaccgc aatcgcagcc
     2401 agaattaacc ccatcactcg gctgataatc gcagcccctg cattaccaat aaggtgctga
     2461 atacggtttg ccgctaatag caacaaatag gtaataaaga gtaccaaaag cataatgccg
     2521 gcggtgataa tttgatcgcc gatatgaaaa cggtgattgt cggttaataa tacgattgcc
     2581 atcatcgccc cgggagaagc aatcgacggt acagctagcg gataaaccgc caattcattc
     2641 agattactgc tgatccgcat ttcttgctcg ggcttgcttt cgccaaaaat catcgttaaa
     2701 gcaaataaca acagcactaa gccgcctgcc gcttggaatg caggtaacgg aatctgcatt
     2761 gattctaaca gcacttgccc accgataagg aagaaaatca aaataccggc ggcaatcaag
     2821 accgcattta gtgcaatttt acgccgtgct tcaatcggca aaccaatggt ttttgccaaa
     2881 taaacaggaa cagaaccaat cgggtcgatc accgcccata aaaccacaaa ttgtaccgct
     2941 aatgaatcaa acatattctc tcctgttatc ttgataattt gcaaaatttt agcataaaac
     3001 aaccgcttgc acggcttttt cttacagata gctcaccggt aacgctacca aattttcact
     3061 taaataaagt ttggtcggat attggttaat aatcgctccc tgccctaatt tccattcact
     3121 agaaactgag tttagcaagt caaaactttt tgccattttt ttggttgggc ttgccgtgac
     3181 cttaatttct atcggataaa gcgtgcgatc atattcaata attaagtcga tctctttctg
     3241 gttagtatca cggtaaaaat aaatcggcgg ctcaattcct tgattatgaa aggattttat
     3301 aatttggctt accacaaagg tttcaaagaa ctgccagctt tttgcccctt gagcaatagt
     3361 ttcgggggta agccatttgg ttaaatacgc cattaacccg gtgtctagaa aatacacttt
     3421 tggggtctta attgcccgtt tcaaatgatt gttgtggtat ggctggagca aatagataat
     3481 gccggaagtc tgcaaaatgg cgacccaacg tttaatcgtt tcattcgata ctccaacttc
     3541 ttgagcaata ttactgtaat tgagtagctc accactacga gaggcaatag agaccataaa
     3601 acgggtaaaa tccgttgtgc tggcaatatt ggttaattgg cgaacatctc gctcaatgta
     3661 ggtcgctaca taagagcgat aataaatctc ccaatccacc tcttgtgcat ataaacgagg
     3721 catatcgcct ttatggataa gctgccagat gttctccggt gattttaatt cttgctcccg
     3781 agctaacaaa tagtcggttg tcggtaaaaa aggttgatcg aacttcaccc ctaaaatttc
     3841 acgcaacgaa agcccttgta attttaaaat agcaatacga ccggcaagtg tttcactcac
     3901 attctgcatt aattcaaagg cttgcgaccc cgaaagtaaa aacaaaccgt tttgctgttt
     3961 tttatcaatt tctaacttta ataacgcaaa aatttcaggc acatactgta cttcgtctaa
     4021 aataagcttg ccttgatggt ttaaaaaaaa caggcgagat tcttgtttag ccagctccag
     4081 caacattggg tcatcaaaag taatatattg atagccctca ccaatatgtt gtaacaatgt
     4141 cgatttacca acctgtcttg cccctgtcac taaaacggca ggaaattgcg ccacgagtcg
     4201 ttttaacagc gattgcattt gccgagaaat catttttcct ccaaaatagc ctaaatcaag
     4261 tttaacctca tatataatgt tgaattaaac ttaatttaaa ttatttttta agtttaattc
     4321 aacacagaat attgaattaa actgaatttc ttattttagt tcacaaagca atggctttgc
     4381 ttttttatgc taaaatacgc aaaattttta acaaaataga ccgcttgcaa tgatcttttt
     4441 tacagactta attttaaaac gagggcattc cgttctcatt gataacagct ccgttaccat
     4501 tcacaccggg cagaaagtcg gtttggtggg aaaaaacggc tgtggcaaat cctctctttt
     4561 tgccttactg aaaaatgaat tacaacctga aggtggcgat gtatcgttgc cgaaaaactg
     4621 ggcgatctcg tgggtaaatc aagaaacgcc tgcgttagct atttcagcgt tagactatgt
     4681 gattcaagga gatcgggaat atacccatct tatggctgag ctagatatcg caaatgaaaa
     4741 gaatgacggc aaccgcattg cgattatcca tactcaactt gataccattg atgcttggac
     4801 aattcaatcc cgtgccgcta ccctgcttaa cggcttgggg tttagcaccg aacaactgca
     4861 actgccggtg aaatccttct ccggtggctg gcgtatgcgg ttaaatttgg cacaagctct
     4921 gatttgtcgt tccgatctgt tattgcttga cgagccaacc aaccacttag acttagatgc
     4981 ggttatttgg ttggagcgtt ggctgagtaa ctatcgtggc actttattgt taatttcgca
     5041 cgaccgtgat tttctcgatc cgattatcga tcgggtgatt catattgaac atcaaaagct
     5101 caatgaatac accggcaatt acacctcgtt tgagattcaa cgtgcgacca aaatcgccca
     5161 gcagaatgcc gcttatcagc aacagcaacg taaagttgct catttgcaga gttttatcga
     5221 tcgctttaaa gccaaagcga ctaaagcgaa acaggcacaa agccgaatta aagcgttgga
     5281 aaaaatggag cttattgccc cagcctatgc tgattcgccg tttgaatttg aatttcgccc
     5341 accgcttgca ctgcctagcc cgttattaat gatggaaaaa gtcagtgccg gctatgcgga
     5401 aaaaacggtg ttggaatcgg tcaaactgaa tttggttccc ggctctcgta ttggtttact
     5461 cgggagaaac ggtgcaggga aatccacgct gattaaatta ttggcgggcg aacttccgcc
     5521 ccaaaacggc tcaattcaac tggcaaaagg cgtgcaactc ggctatttcg cccaacatca
     5581 ggtggataca ctacgttttg atgaaagccc actttggcat ttacaaaaac tcgcaccgga
     5641 aaaaaccgag caggaattac gcaattattt aggcggtttc gattttaaag gcgataaagt
     5701 ggtacaagct gtgaaatcat tctccggcgg agaaaaggcc cgtttagtgc ttgccttaat
     5761 tgtatggcaa cgcccgaatt tactgctatt agatgagcca accaaccatt tagatttaga
     5821 aatgcgacaa gccctggttg atgcactgac ctattacgaa ggctcgctag tggtggtttc
     5881 gcacgaccgc catttattgc gtagcaccgt gaatgaattt tatttagtgc acgaccgcaa
     5941 agtggaaaaa tttaaaggtg atttagacga ttaccaaaaa tggctcaatg agcaaaacgc
     6001 cttagccaac gagccgaaat ccgtacttgc aaaagattcg gcaaattcga ccgcttgctc
     6061 tagcaccaat gaaaatagtg cagctcaacg caaagagcaa aaacgcttag aggcagagcg
     6121 ccgccaacaa accgccccat tgcggaaaaa aattactcaa ctggaaaaag agttagaaaa
     6181 agcaaccgaa aaattaaata aactcgaagc aatgcttacc gaaagcgaca tttatgaagc
     6241 cgaaaataaa gcaaaactaa ctgaaacact tgcgaaacag ttagaggcaa aaaggctggt
     6301 tgaagaaatt gaaatgcaat ggttggaggc tcaggaggag tttgagacca tgttacgcta
     6361 gggttctaca agatagcgca agcgtccacg cttgtgccat ttaagggaac tatacacctc
     6421 aaaaaaacaa tgatcattaa gctagctttt ttataaattt aaaaacctat agattaaata
     6481 aataatgata ttaatagtaa aatcacgagt gcaactacac tgacgataat aaaatcaggc
     6541 atacttattc tccctataaa atgtggtaat gtaactacaa attaattata taatgaacct
     6601 aaaaaaggtt caacattatt tgtacctaat ataggtgcaa tgaaaaatct tagattatca
     6661 atacattcca gcgagcatat ttggttaaga gaactattct taaaacgccg tttggaacta
     6721 gggctaacac aacgcacatt aggagaaaaa atgggcgttc tttactcatt tatcggaaaa
     6781 gtagaaacag gagatcgcag attagatatt tttgaattta tcgcttattg caaagggtta
     6841 gatttagatc ctttatctgt attgcaagaa attgaacaac aatttcctca taaataaagg
     6901 cattgagtta taactcaatg cctttatttt ctatgtcaaa tctctacatg ctcggcttag
     6961 tctctgccag aatggcgtat ttattattca tttcctctgc ccaagcggtt aaatttgggt
     7021 aattttttgc aagatcgtag cctatcttat ctaagcggaa tgcccaccag tcaattaatg
     7081 ctactgcggt taatgtgcct aaattcagct ctgtgccaaa ctcttgcaat gcctcttcta
     7141 attgtctgaa cgaacggata ttgcgttcca ttaattgctc gtggcggctg acccaccatt
     7201 cattctcggg gcgagccata cgttcttgta ataaagttgg catcgtattt tccataatgc
     7261 cgtccgccaa attatgtaat gccaacactg cccagcgagg tttaccctct ttaggtaaca
     7321 gtggagtgtt attgcctttt tggtcaagat attcgctaat taacaaacta ccgaaaagcc
     7381 aacgtccgca gttgcgttgt agggcaggaa tacgtcctaa cgggttatct tgattatgtg
     7441 gcgaatttgg atccattgct tttgtcaccc gcaacatttc gactttatcg tctaattggt
     7501 ggtgtttaat caccgcaagg gctttgcggg cgaaagggct ggtggttgag taccaaagtt
     7561 tcatactatt ctccgtgttt gatgtgattg gatttgcaaa ttttttgcca aaaatgaccg
     7621 cttgtcggca aggcttgcac tgagattttc tcattttcgt attcaaaatc aagctgataa
     7681 gcgtgcaaat aaacacggtc ggcttggcta cctgaataga gtttatcacc taaaatcggg
     7741 ctgcccaaac ttttcattgc cactcttaat tggtgagttt tgcctgtttt gggttgcaaa
     7801 ataaaatgcc tgagcgagtc ttcaacagaa tgagaaataa attgcgttac tgccgggttt
     7861 tccttactgt ggcataattt ccacgctcca tttctgcttt tttgcatatc gccaacaatt
     7921 ctaccctgct ttttcttcgg ctttttatcg cttaatgccc aataggtttt gtagatttta
     7981 tgctgttcaa ataaatggta aaaccttgct gccgcctctt tattcaacgc taaaatcagt
     8041 aaacctgagg tgattttatc cagacggtga accagccaaa cctgctttac attcagttgg
     8101 cgagccacta attccgttaa gccgatttca gcctcatctt tatgcacact caagccttcc
     8161 ggcttattga taataataaa atcacgatgt tgataacaaa taggcaatgt tggggtcatt
     8221 ttgctataat ccttccaatt tttgactatt ttagcaagga aattacaatg gctgttacca
     8281 tttatttagt acgacacggc agaaccgtgt ggaatttgga aggcagatta caaggctcgg
     8341 gcgattccgc tttagtagaa gaagggatta tcggagcgaa gaaaaccggc attgcgttaa
     8401 aacatattcc gtttaccgcc gcctattcca gtatgcagaa acgggctcaa gataccgcaa
     8461 actacatttt agcagaaaat gaacgcagta atattccgca ttttcatcat aaaggcttga
     8521 atgaatttga ttttggcagc tgggaaggaa tgaaatctgt cgatttgcaa gaaaatgatg
     8581 aatattgggt gatgaaacgt acaccggcag aatatctggc aaaagcaaac ggtggcgagc
     8641 gatttgagca actttatcaa cgggtgactc aggcgttcaa tcaaatcgcc gagctacacc
     8701 aaaatgacgg caaagtgctg attgtttcac atggtatgac cttaacctta ctcacggctg
     8761 tgttaaaagg cattgcgtgg caagatttcc gcaatgaaga aaaacatagc tttgtgttca
     8821 atactgccat tacgaaagta gaagtagaga atggcaaagt aacggtgctg gaatttaata
     8881 ataccgacca tttggataat gtgccaacaa gccaatacaa acgataatat taagggcgga
     8941 acattgtccg cccatagcat tttctaatca gagaacactt tttctttcgt ttctgtttta
     9001 gcaaataccg tatttttgac cgaagtaagc aactcctgac gaatagctga aattcttggc
     9061 ttctcattcg cttgaaaagc aacaggacga caaaattcca ttgctttaat gccaaggcga
     9121 gcagtgagta aacccacacc aataccttgt gcggcacgga gcgataattt cgccgtaagg
     9181 ttttgcgaga agaaatccat tccaacatca gtagcgattt cggttgcacc ggcgaacacc
     9241 atatttttca gcaccatttt gaacagtttt aagcggctga tataacccaa ttccattcca
     9301 taggctttgg taattttatt cactaaagcg atatttcttg ccgccattaa caacacatca
     9361 actattgcca gcgggctaac cgccacaatc accgcatttt ctgccgcatt gcgggaaatc
     9421 atctgcttaa cctgtttatc tatcggcttt agcacatttt cgctaaacag atatagtacc
     9481 tctttggcat tataagcctc gttcagttcg cttttccaaa gttgctcggc ttgagcaatg
     9541 ctcggcaagt gattaagctg atttgcaata ttttcgcaaa atttgaccgc ttgttcgcca
     9601 tcattggaag gcagctgttc cagcaataat tggttactca tttgttgatt tttctgatga
     9661 tttcgcaaat acaccaactt tcgccattcg gaaataatcg ccccaacgcc caacaagctg
     9721 acaataaaaa agactatcga gaacgcaaaa tagatccact ctctttgctg gaacgtatca
     9781 atcaaccact gaatactttg agcaattacc gccacgccaa acaaggcaag tgtggcaagt
     9841 agtactcgaa tccaaaagcg ggaaggctta aggctttctt caataatcag ctccgcctca
     9901 actgcttttt cctcttcttc aataatcgca ttttcgagat caaactcttg tttaggttca
     9961 aaatgctcgg ttgtttttag ctcttcttca ttaaaaattt gcttactcat tattcctcca
    10021 ctgccttttc aatatgtgct tttagaccat catagccgtg ttcggttttc aagatatcaa
    10081 ataattctac cgcttgagga tattctttat ccaaataacg tagccattgt ttgatgcgag
    10141 caacgtggta aaaaccggta tcaaactgat tttccatctg aacgtactta aacaatagct
    10201 gtagcacttc attccacgcc attttcggaa cattatattt caccactttg cttaaattcg
    10261 gtgtgtttaa cgccccacgc cccatcatta atgccttgca agcggttatt ttttggcaat
    10321 ttttcgccga ttcaaaatcc caaatttcgc cgttggcgat aacaggaata gacagccgtt
    10381 gttgaatttc gccaatcgcc tgccaattaa ttctttctgc tcgataacca tcaactttgg
    10441 ttcgcccgtg aacggtaatt tcattcgctc cgccctgttc taccgcatcg gcaatttcaa
    10501 aacattggct aacggaatcc caacctaatc gcacttttac ggaaacgatt ttatcgcttg
    10561 gcacagcttc acgcatcgct ttggttgcac gataaatcag ttccggatct tttaataacg
    10621 aagccccacc attgctgcca tttaccgttt tagaggggca gccacagttg agatctaccc
    10681 cgtgtgaacc aagctcaatg gcaagagctg cattttctgc cagccactgt gggtgttgcc
    10741 ctaaaagctg tacccgcact ggtgtgccgg aatcggttaa tccgccttga tatagctcag
    10801 gggctaggcg ataaaaggtt ttcttcggta aacgttgatc gaccactcgc acaaattcgg
    10861 aaatacagag atcgtagtca ttcactgaag ttaaaaggtt gcggacaaaa gggtctaaaa
    10921 ccccttgcat cggggcaaga ataacgttag gaattggatt cattggtaaa ataaaaaata
    10981 caagcggtta ttttttctca acattttgca aaaaattggc aagaaacaac cgcttgaagg
    11041 ttaaaaatgt ctatcgtgaa tgcgcaaatc ggggcgagcg atcaggtaaa tcatcagtgc
    11101 ggttaatgcc ccaagagtat ccgcaagcat atctttttga gcgtcccaaa tatccccttg
    11161 cgagcctaga aattccacgc cggcattgcc accttcaatc acggcatatt gccattcaat
    11221 aatttcgtaa gctgccgcca ccgacataat gaaaaacagc gagaagaaaa atgctacgcc
    11281 cattccgcac ttgcgtttac gcagtaacca ttctgccatc gggaagctgt aaaaaccgat
    11341 aatgtaatgt gctactcgat caaaatggtt acgatcttca cctaaaatcg gggttagaaa
    11401 ttgatttgcc cactcaaacg gcacattggc aaaggtatat tttgccccga tcaagtgcat
    11461 aatcagccaa agcgacatca aaaaataagc taacccacta aactgaaatt tagggtaagt
    11521 gataattaaa agggcaaaaa cgataaaaat cggtatcact tccgcatacc aaactgcgcg
    11581 gtctgtcgga tttaaccctg accaaaccgc aatcacggta ataacaatcg ctaaaaatag
    11641 agggatgata tgcgagcgtg aatccattat ttccactctt tcactttaca aattaaatcg
    11701 tacgccgctt gaatttgttg agctttctct tttgccaact ccatcatctc atcaggcaaa
    11761 cctttagcgg ctaatttatc cgggtgatgt tcgttcatta acttacgata agcccgtttc
    11821 actgtatttt gatcgtcttg tgcggttacg cctaatacgg tataggctgc ctcaatgctt
    11881 ggttgtgcag gctgctgata actgccctga tagccacctt gagattgctg atgataactc
    11941 ccattttgct gataatagcc accattgcgg aattgttgag ctgccataat cattgcgatc
    12001 atctgctcaa attggaagcg agacattccc attgtttcgg caatcgtaaa cagaatttgt
    12061 tgctcgttca catcaagttg cccatcttgc aaggctgcct gcatttgcac ttcgacaaag
    12121 aaacgtaata agtcagttct tgccccacag gcttctctga actcttgaat gacttggcgt
    12181 aacgggaagt caggctcttt acctaaggta aaggcatttt gcgctaattg ctgggctgca
    12241 ctatctaatt ttaagcgagc cattaacgct cgggctaatt caatatccgc ttcagtaaca
    12301 cgcccttttg ctttcgcaat atgccccaac accgcaaaag tggtttgggt gaaaagcgat
    12361 tggcgagtta aatttttacc gaaaagactt gaacgaactg aacctaattc atagagtttt
    12421 ttatcggcta aatgcccgat aaaagcgcca agtatcccac caaataaacc gtgaaaaagc
    12481 tgatagccca agaaaaaacc gactattttt ccgataaatt gcattttttt atccttttat
    12541 agaaatgaat aaacgttatt ctaacaaaat tttactttga ttgcttttta gttaatacaa
    12601 acataagcca gcttgagaca aaaataattg cataacctag ccaactcaac atatccgggt
    12661 attgttcaaa gaacaacaac cctaaaattg cactaaatag cacagaggca taactataaa
    12721 ttgagatgtc tttcgccgcc gcatatttat aggcggtagt tacacaaaac tgcccgaccg
    12781 ctgaagttac ccctgctaac actaagtaga ttgtctgtaa attggttagc actacataat
    12841 caatggcgac aaaaggcaat aatatcaagg tcgaaaaggc agaaaaaaag aaaacaatgg
    12901 tattaggtga ttctactttt ttggtttttg ccaataacct taagcataaa taggcaatgg
    12961 ctgcaaacac agagccaatc acgccaacca gataaggcat aaagcgaata tcaactgccg
    13021 gtttgataat aaaaagtgcc ccgataaagg caataaggca taaaatccat tgcaggagag
    13081 atgctctctc ttttaaaaaa atcgcagaaa gaataattaa aatgaacgac gtgagtttgc
    13141 caatcatatc gacatcactt agcacaaggt gatcgatgat atatacacca cataaaatcc
    13201 ccaataaccc ggtgatggaa cggcttaata ataacaaacg attttctgca taaccaaaga
    13261 ataattggcg atttttccac acaatataac cgcttatcaa tgctgtgcgt tgcgaaaaat
    13321 cgctttttgt gcaatcggta catcccccga aagacgaaga aaagcagcca taatcgcaaa
    13381 gcttagtgcc gacaaaagca cacaaaaaat ggctttaaat aacggcgaga gcgaattcca
    13441 aaaattcata gcataaaggc ttttaataaa aataaagccc tgattattca gggcttcaat
    13501 ttagaatcaa ctaagaatta gtattctaat actgcacgac ggtttttcgc gtagtcagct
    13561 tctgagtgac ctaatactgc tggtttctct tcaccgtaag aaacagttga agtgttgtta
    13621 gcacctttag ctgctaagta acctttaact gcatctgcgc gacgttgacc taatgcgatg
    13681 ttgtactctg gagtaccacg ctcatcagcg tgaccagcaa tagttacgtt accttgagtt
    13741 tttgctaata attgagcgtg agcgtctaat aattgacggt attcaccttc aactgcatag
    13801 ctgtcaaaac cgaagtatac agtgttgtat tgtgctttta attgttcagc tgttaaacca
    13861 ccgaattcgc ctgctgcatt tgctgctgca tttgctgctg cgtttgctgc tgcgtttgct
    13921 gctgcatcat ctgatgagct gctacatgct gctaatgcga aagctggtac tgctaccatt
    13981 aatactttag caaatttttt catttgttgc tcctaataga gaaatattat tatttagtta
    14041 agtatggtga ccatgcaggg aatttataat gtccacctgc gccaggcaaa ttagctttaa
    14101 aacgcccatc tgcagacacc aattgtagca ctttactcgt acctttggta gagctataaa
    14161 taaccataat gccattcggt gaaatacttg gactttcgtc taagaaagtt gaactcagta
    14221 cttctgtgcc acctgaagcg agatcgcgtt tcacaactct atcaccggca atcatgatta
    14281 aattcttacc atcagatgat actttcgcat tatagctacc gctaccgccc attgggctag
    14341 caccaccacc tgatgaactc attctataaa cttgaggaga acctgcacgg tcagacgtaa
    14401 agtagattgt gctaccatct ggagaccagc ttggttcagt attatttcca gcattagcgg
    14461 tcaatttact tggtgtacca ccgccactac ctacaacata aatatttaac tcaccatctt
    14521 gatttgaggc aaacgcaatg cgagaaccgt ctggagagaa tgatggcgca ccattatgtc
    14581 ctttcaatgc tgccactaca cggcgagcac ctgaacgaat atcgtgaaca acaacctgcg
    14641 cttttttatt ttcaaatgtc acataagcta atctgctacc atctggtgac cactctggcg
    14701 acattaaagg ctctttactg gttgtaatag taaaggcatt aaaaccatca taatcagata
    14761 ctcgtaattc atacgatgat acgccacgtt gaaccacata cgcaatttta gttctaaatg
    14821 caccgcgaat ttgggttaat ttttcaaata cctcatcact tactgtatgc gcaccttgac
    14881 gaatttgggc tgccggaaca ataaatgaac cttgggcaat gacaccaccc gctgtacccg
    14941 atgtaccaag agtatcaatt aattgataag cgacattata accgccacct gtgctactca
    15001 cttggccaac tacaatatta tcaataccga tagcactcca ttgatctgcc accacttccg
    15061 ctgctgatcc cggttgagca ggcatttgag agcgttcaag cggtgtaaat ttaccactat
    15121 ttcgcaaatc atcagaaata atttgtgcaa catctgccgg cacaccgctg gctttaaatg
    15181 gcacaaccgc aatcggctga gccatactta caccttcatc aatagaaatt cgcacatcag
    15241 aatcagcaac cacctgagtt gtcaataatg ctgaaaagat gcctattaca cccgatatac
    15301 gagagaataa tttcatttgt agtcctctaa attatttaac ttttaaacta aaatcaagtg
    15361 ttggtgattt aaacatatta tataccgcat ctgatggtgc aggtggtact tttctagttg
    15421 ccactattgc acttaccgct gcatcacata ctgctttatc gccactgata acttgatagt
    15481 tagtaattgt gccatctcga cttaagaata tcttaacatc acattgtttt ccggcaaaac
    15541 ttggatcaac ccgatatcga gattgaatta atttcttaat tcgttgacca tatgcattac
    15601 catctacatt agtaccttgc cctaagccac ttgtaccacc agaaccttgt gatcctgctg
    15661 agtttttgtt accaccttta cttgaaccac caccgatgtc tccactattg aggaaatcat
    15721 caagtgcttt attgtttttc gcttgggcgg cttttgcctc agcagctgcc ttcgctttag
    15781 cttctttctc ggctttctct ttggcttctt tttctgcttt tgctttggct tctttctcag
    15841 ccttttcttt tgcttctttt tctgccttgg ctttagcttc tttttctgct ttttccttcg
    15901 cttctttagc ttcttttgcc tgctgttcct tcagttcttt ttgctctttt aactttttct
    15961 cagcttccgc tttcttctgc tgttcaagct tcttttcaag tgcttcttta gcttttttct
    16021 cttcttcagc ttgtttagca gcagcctcta aacgcttagc ttctgcatct gctttcagtt
    16081 ttgctgcttc agctgctttt ttacgagttg cttcttctgc ttgctgcttt ttaagctctt
    16141 cttgcttagc ttgttcttgc ttttgctgtt cttgtagttt ttgctgacgc tcaatttctt
    16201 gctgacgctg tttctcttga atcgccgcta actcagcttg tttctgtttt tggatctctt
    16261 ccggagtcgg tttatcttcc acatcttctt caacagcttc ctctttaggc tctacctttg
    16321 gcttcgatgc ttttgagcct tttttctctg ccaataactg cccatattca gcagccactt
    16381 gcccagtatc taccatcaca gcttcaaagc tatcgctatc gccaccactg ccaccagccg
    16441 cagcgagttc cgtcttagtg aaaagagacc cgagcaataa caacccgatt aacaatatat
    16501 gcaataagat cgaaacaata accgctagct ctagtctatc ttgttgagat ttcacacgtt
    16561 atccttggct atttaccttc tgtcattaaa cctaccgatt tcactccggc gtctttaagt
    16621 agtgtaatac ctttcataat ttcttcataa ggtactactt tatcaccggc aactaaaaat
    16681 aaggtattgt tatctttttg aaattgttcc cctgcatagg caacaacttc tgattcatta
    16741 atattctctt gcccattact ttgcacatag ttaccgtcaa ttttcaattt atattcacca
    16801 acacctgcca cctccaaaat cactggagtt ttatcttcat tagaaactga ttggctatgc
    16861 gtatcttccg gtaaattaac ttctacactt tgactgataa ttggggccgt tgccataaaa
    16921 atcagcaata ataccaacaa tacatcaaga aatggaacaa tgttgatttc tgatttaatg
    16981 tcattacgtt ttaaacgacg agacatatat tcctctttac aggtgcttag caccttaatt
    17041 gatctgaaat aaccggcaca gtgtcccggt ctcgaataat gcggttacaa gcggtctttt
    17101 ttacgaaaaa ctttacaaat tttcattaaa aatcaaccgc ttgtagatta tctttttgaa
    17161 aaagcctgac ggtgtaataa ggtcgtgaac tcatcaatga aattcacata cccttgctca
    17221 actttaccta aacgtaaatt caaacggtta tatgccatta ctgcaggaat cgccgcaaat
    17281 aaaccgatag ccgttgcaat taatgcttct gcaatacccg gtgcgactga ttgtaaagtt
    17341 gcttgcttaa ctgcacttaa tcccataaag gagtgcataa ttccccaaac cgttccgaat
    17401 aaaccaatat atgggctgat tgaacccact gtgcctaaaa acggaatgta gttttctaaa
    17461 ctttccattt cacggtttaa tgctaagttc atcgcacggg tagaaccttg aataatcgat
    17521 tctggcgcat ctgggttcgc ttgttgtaaa cgggtaaatt ctttaaaccc aacataaaag
    17581 atttgctctg aaccatttaa tgcatcacga cgattctcta aaccttggtg taaacggttt
    17641 agatcttccc ctgaccagaa tcgatcttca aaagcaaggg aatctttttt ggctttagtt
    17701 aaaattttgc tgcgctgaat aatcaccgcc caagacaaaa ttgagaatac aataaggatc
    17761 agcatcacga tctttaccac aatacttgct tctaaaaata acgaaagaag actaaattca
    17821 gtttgcatta ataaaactcc gaatagtttt taaatagaaa aataactttt ttgtaatgct
    17881 tgacgaatat catcaggaat tgcaaccggc ttcattttga ttaaatcaac acaagcgacc
    17941 gtaacatttg cctcactcag acaatcgcca tctttccaca atcgttgttt aaagataagg
    18001 gttgctttct tcaattctga gagtgttgtt tccacattta ataaatcatc taaacgagca
    18061 gggagcttat aatctatttc aatcctctta acaacaaaag caagggattg gctaaaaagt
    18121 tcctgctgtg agaaatgctg ctgtctcaaa aattccgttc ttgcccgctc aaaaaaattc
    18181 agatagttgg aatgataaac tactccgccg gcatcagtat cttcataata aacacgaatc
    18241 gggaaatcca taagcattat ttctctcatt caaaatgaaa aaacgcccaa aatttaggcg
    18301 caaattgtga gatattttag gatcagaaat attgttatgc aagtatattt tttggtaaat
    18361 tgcaaaaata ttttttatct atcaaaaata aaaatagaga cataaaaatg cctctattta
    18421 acaagtaaaa tccataatgc cggaataaca ataaggtaac ctagaagtgg taaaaaaatc
    18481 actttccaaa tagcagctcg gatttcaaat ccaattccat gtacccataa aatagccata
    18541 ccataaaata ccaacattgc taaatacggc gtttttccac caaaagaaag agcgaaagcg
    18601 gtcgaattta cccaaatagt tgcaaataat acagccgcta aaataaaaga aagggctttt
    18661 aacaagccct ttgctgttaa gttatagagt ttatgaatca ttactcgtca aacttacctg
    18721 ttttttcaat gctgatcgtg atgactgttg caaagaagat tgcaagcaat acacctaaga
    18781 cccaagttac ataaaacata ttgtgtctcc ttattagtaa gctgctttat tttcttctaa
    18841 ataactagca tctaaacgac catacatttt gatatatgac caaatagtat atgctaatac
    18901 taacggtaca aagataccag caacaaataa cattacagtt aatgttgtgt ggctagcagt
    18961 agcgtcccaa accgttaagc tcatttctgg atgagtaatt gacggcataa tgaatgggaa
    19021 cattgatact gcagcagtta aaatcacccc aacaatcatc aatgatgatg agaagaatgc
    19081 taaacctgaa cgatttgctt ttgaggcaat aatagtcagt aatgcaccta ctacaactaa
    19141 tgcaggaaca acccataata caggcatttc agcataattt ctaaaccatg caccagcttg
    19201 aaccgctaca gttttattcg tcaatagaga ttgtgcatta tgatctaact cgcttgtgat
    19261 cacaaaacca tctttaaaat ataaccatac acctgcaaga ataaatgcca ctaatacaat
    19321 agaagctgtc acttgtgcca cttttcttga gttgttatgt agctcatcag tagttttcat
    19381 ttgtaaccaa gttgcaccct gtgtggttaa catcattaag ctgataatac cgcacactaa
    19441 tgcaaatgga tttaataaac caaagaatga acccgtatat tgtgattggt taatattatt
    19501 aaattcaaat ggtacacctt gtaataagtt accgaatgca acaccgaata ctaatgatgg
    19561 aacgaaacca ccaataaata atccccaatc ccaagcacta cgccatttcg gattatcaat
    19621 ttttgcacga tactcaaaac ctacagggcg gaaaaataat gctgcaagca caagcaccat
    19681 tgcaatatag aaacccgaga acgaagttgc atagactgtt ggccatgcag cgaagatcgc
    19741 accaccagcg gtcaataacc atacttggtt accatcccag tgaggggcaa ttgtgttgat
    19801 cataatacga cgttcaacat tacttttacc aatgataggt aaaaggttta atacgcccat
    19861 atcaaaacca tcagtaattg caaagccaat taacaatacc gcaattaaga tccaccaaat
    19921 aaagcggaga atttcataat cgatcatttc taactcctat tatttagttg attgttcaaa
    19981 ataataacgg cctgttttta atgcactagg gccaagacga ccatatttga acattaaata
    20041 catttctaca actaagaata gtgtatataa accacacaat aagccgattg taaaccataa
    20101 atcacctgtt gttaatgcag agtttgacac accgacaggt aacatttcat agatagccca
    20161 aggctgacgg ccatattcgg caaggaacca accagattca atcgcaatcc aaggtaacgg
    20221 aagaccgaat aacaagcctc ttaataagaa acggctactt tctactttac cacgcatatt
    20281 ttgaataaat gctgtcgtaa tcaagataag catcaagaag ccagataaca tcattacacg
    20341 gaatgcccag aatgtagggc ctacatttgg aattgtatta tctgctgctt tttgaatttg
    20401 ttcttcagtc gcatcaacca cattaggtgt atattgtttt aacaataacc caaagcctaa
    20461 atctttttgt acagctttaa atgcttcttt atccgcctct gtataattgc cagaacgtaa
    20521 tttttctaat agtccgtagg ctaccatacc ggtacgaaca cgttgttcat taattacacg
    20581 aatatctttt aggcctttaa tttctttatc taaagaacgg gttgcaataa taccagctgc
    20641 ataaggaata tgaattgaga attcattttt catttccgca gtatttggaa tcacaaaagc
    20701 attccaagca gctggagcag gctgagtttc gaattcacct tccattgcag ctaatttagt
    20761 cggctgagct ttaccgattt cataaccaga ttcatcaccc ataatcagta cagagatgat
    20821 cgcaattaaa ccaaaacttg cacctactga gaatgaacgt tttgcaaagc ctaagtcacg
    20881 accttttaag atatagtatg aactaatacc taatacaaaa atagcaccac aaacatagcc
    20941 tgcggttaca gtatgtaaga atttagattg tgtaactggg tttaatacaa gttcagagaa
    21001 acttgaaagc tccattcgca tggtttcaaa gttgaattca gaagcaatcg ggttttgcat
    21061 ccaaccatta gcaactaaaa tccatagtgc agagaagtta gaaccaaacg caacacagta
    21121 agttgctaat aaatgtttcg ctttcgataa acgttcccag ccaaagaaga acaagcccac
    21181 aaaggtagat tctaagaaga acgccattaa accttcaatc gctaatggag cgccaaaaat
    21241 atcacctaca taatgagaat aatatgacca gttcatacca aactggaatt ccattgtaat
    21301 accagttgtt acccctaggg caaagttaat accaaataat ttaccccaga atttagtcat
    21361 atctttatat acttctttac ccgtagttac atacagggtt tccatcacca caaggacgaa
    21421 agaaagacct aatgtaagcg gtacgaataa gaagtgatag agtgcagtta gagcaaactg
    21481 caaacgtgag agttcaacta catctaacat ctcaaacctc ttatattaat atactaattt
    21541 gacaattaga ttactgtaaa agtaatcacc cacaaattca ctcaattcta ataaataacc
    21601 caaattggtt aattttataa
//
LOCUS       DANLXD010000038        21372 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.038, whole genome shotgun sequence.
ACCESSION   DANLXD010000038 DANLXD010000000
VERSION     DANLXD010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 21372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21372
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.038"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..308)
                     /locus_tag="PXD18_001156"
     CDS             complement(<1..308)
                     /locus_tag="PXD18_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase family
                     protein"
                     /protein_id="HDL6301598.1"
                     /translation="MKSLVIKLFGTKKEKKTFKFSKIESVLLKPIGDAIGDAVVHIAH
                     LEQIKKALPNVKIAVLVTSRNKLIFSQANVVDMILEDKVSTYLSQRGHWDLYLDFKPT
                     "
     gene            356..1387
                     /locus_tag="PXD18_001157"
     CDS             356..1387
                     /locus_tag="PXD18_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL6301599.1"
                     /translation="MNIKATLRKARLVIGKAILDSKNTDLILSEIPNKILFLRHDGKI
                     GDYVVSSFVFREIKKQSPQTQIGVVCSQKNRYLFENNPYIDKLYLVKTKSIPDYIRGG
                     KQLAKEQYDVVIDPTVTLRNRDLLFLRTISAKHYVGYQKQKYRLFDLNVEDRKQHFSE
                     IYQDALALIGFENIETQYDVPLNATSNQSIKHYLYENQIRNYIALNLFGAGSARRFSE
                     QKINELLSCLKQHSDKPIVLLTFPEVTAKLCSFTKKYKNIFVYEKTKSVFDSIELIRF
                     ADLLISPDTATVHIASGLSKKIIAFYSSDEQNFIHWHPNNQAETHILRFRKSVNDLDF
                     AAIKPEWLK"
     gene            1389..2279
                     /gene="ilvY"
                     /locus_tag="PXD18_001158"
     CDS             1389..2279
                     /gene="ilvY"
                     /locus_tag="PXD18_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator IlvY"
                     /protein_id="HDL6301600.1"
                     /translation="MDFQSLKLFLDIAQSRSFIRSAEKNYMTASTLTRHIQRIEEELG
                     QPLFLRDNRQVRLTEAGERFLAFAQQGWAEWQQLQNQLSPAQGDLEGELKVFCSVTAS
                     YSHLPPILGKFRQKYPKVDIKLSTGDPALALEQVQSLAADISVAGKPEFLPNNIVFHY
                     IDDIQLSIIAPRVASQATQFLQQSPIDWKNIPFILPVNGPVRKRIDRWFKEQKIKDPI
                     IYATVSGHEAIVPMVALGFGVALLPDIVIKHSPMNNQVSYVNLPSPITPFELGICVQQ
                     KRLQEPIINAFWQLLSDNSA"
     gene            complement(2413..4815)
                     /gene="lon"
                     /locus_tag="PXD18_001159"
     CDS             complement(2413..4815)
                     /gene="lon"
                     /locus_tag="PXD18_001159"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HDL6301601.1"
                     /translation="MAPRKKKAIELPLLPLRDVVVFPYMVMPLFVGREKSIQALRSAM
                     DSNKQLFLVTQQDPNKEEPNAEDMYGVGVIANIIQMLNLPDGTVKVLVEGQTRAKIEQ
                     IHDDENGFWAAIQPIYSEYDDENEELKAIAKTTLTEFENYVKNNKKIPAEIIAKLQKI
                     TLEDRLADTIASNLIAPVKKKQELLEQPNLIARFEALLIAMATEMDTLETETRIRNRV
                     KQQMEKNQRDYYLNEQIKAIQKELGNGDDVEQSELDKLKEKIDAAKLPTEVKDKLNTE
                     FKKLKAMPQSSSEATVVRGYIDWILQMPWHKKSAVKKDLAQAQEILDKDHYGLERVKE
                     RIVEYLAVQSRLNKLKGPILCLVGPPGVGKTSLGQSIANATGRKYVRMALGGVRDEAE
                     IRGHRRTYIGSMPGSLMMKMAKVGVRNPLFLLDEIDKMAQDMRGDPASALLEVLDPEQ
                     NKAFNDHYLEVDYDLSDVMFVATSNSMNIPPALLDRMEVIRLSGYTEDEKMHIARGHL
                     LAKQQENNGLKEGELTIEDSAILSIIRYYTREAGVRSLEREIAKICRKAVKALVLDKK
                     LKSITVSEKNIEEYLGVKRFDYGKMDSQNRIGEVTGLAWTEVGGDLLTIETASVAGKG
                     KFSYTGSLGDVMKESIQAAMVVVRSRAEKLGIAEDFHEKRDIHVHVPDGATPKDGPSA
                     GIAMCTALISSLTGNPVRKEVAMTGEISLRGKVLPIGGLKEKLLAAHRGGITTVIIPK
                     ENEKDLEEIPENAKAALDIHAVETIDEVLALALENPPMGIEILSKAEIKVKKSRAKAT
                     VQ"
     regulatory      5019..5137
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            5313..6410
                     /gene="ribD"
                     /locus_tag="PXD18_001160"
     CDS             5313..6410
                     /gene="ribD"
                     /locus_tag="PXD18_001160"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005708727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HDL6301602.1"
                     /translation="MTDVQYMAYAITLAEKARGWTSPNPLVGCVIVKNGNIIAEGYHQ
                     KAGSWHAERNAILNCEEDLTGATAYVTLEPCCHHGRTPPCSELLIERGIKKVFIGSRD
                     PNPLVSGKGAAQLRAAGIEVVEDFMRTECDALNPIFFHYIQTKRPYVLLKYGMTADGK
                     IATYTGNSKWITGEAARANVQKSRHEYSAIMVGVETVLADDPMLNSRMENAKQPVRIV
                     CDSQLRTPLDSQLVQTARQYRTIIATLNNDAKKQAEYTACGVEILVTGERDKRVDLAD
                     LLQKLGELGIDSLLIEGGSQLNFSVLEQGLVNRVHCYIAPKLIGGKAAKTPIGGKGIG
                     ELAQAVKLRLKSTELLGEDILLDYEVDLLRN"
     gene            6627..7274
                     /gene="ribE"
                     /locus_tag="PXD18_001161"
     CDS             6627..7274
                     /gene="ribE"
                     /locus_tag="PXD18_001161"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HDL6301603.1"
                     /translation="MFTGIIEEVGQIAQIKKQGEFVVVTVKAKKILTDVHLGDSIAVN
                     GVCLTVTSFTQEQFTADVMSETLKRTSLGELSINSSVNLERAMAANGRFGGHIVSGHI
                     DGTGVVAEITPADNSTWYRIKAEPKLMRYIIEKGSITIDGISLTVVDVDAESFRVSII
                     PHTIKETDLGTKKIGSLVNLENDIVGKYIEQFLLKKEPENPQSKITADFLKNAGF"
     gene            7293..8492
                     /locus_tag="PXD18_001162"
     CDS             7293..8492
                     /locus_tag="PXD18_001162"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HDL6301604.1"
                     /translation="MFKFSTVEEAIQAIAQGKIILVSDDADRENEGDFICAAEFATPE
                     NINFMAKYGKGLICTPISTEIAKKLNFHPMVLENEDNHQTAFTVSVDHIQTGTGISAF
                     ERSLTCLKMLDENAKPEDFRRPGHVFPLVAKDGGVLVRNGHTEATVDLARLAGLKPAG
                     LCCEIMAEDGTMMQMPELQAFAQAHNMPFITIQQLQEYRRKHDSLVNVVSVVKMPTKY
                     GEFKAHSFVETISGKEHVALVKGDIGDGENVLCRIHSECLTGDAFGSQRCDCGQQFAA
                     AMNQVEQEGRGVVLYLRQEGRGIGLINKLRAYELQDRGMDTVEANLALGFKDDEREYY
                     IAAQMFEKLGVKSIRLLTNNPAKIEGLIEQGLNVVAREPIMVEPNEHDLEYLKVKQHK
                     MRHMFNF"
     gene            8698..9162
                     /locus_tag="PXD18_001163"
     CDS             8698..9162
                     /locus_tag="PXD18_001163"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HDL6301605.1"
                     /translation="MATFQGNYIATGLKFGIVATNWHKIFIDQLLNGATDKLLRHGVE
                     EKNIDTVWVPGALEISIAAKKMAQSGRYDAIICLGAVVRGATSHYDVVVNESAKGISS
                     SALETGVPIINGILTVENLEQAIERSGTKAGNKGEECAMVAIEMANLLKALA"
     gene            complement(9208..10716)
                     /gene="lnt"
                     /locus_tag="PXD18_001164"
     CDS             complement(9208..10716)
                     /gene="lnt"
                     /locus_tag="PXD18_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HDL6301606.1"
                     /translation="MNFAKNPPFLTACLLAIILGAIGTFAYSPFDIWILAFASAAGLV
                     WSATLANRKTALWATFAWSIGYFCTGVNWVSVSMTQFGGVPTIVSYIAVFLLACYLAI
                     YNLLFSVVSHRLKLNNPFALAAIFTFTEYLRGVVFTGFPWLQFGYSLIDSPFAGIAPI
                     LGVEGLTFLVIVASSYLVKIIQQENKTVPSLMVLAVIFGLSFATRFLQFVQIDTEKQP
                     LVVSLVQGNIEQKMKWDPQHFNHSVRTYEQLILPLLGNSELIILPESAIPALENQISP
                     LLGSLDHLARQHGSEIIIGTLYQNEQEELFNSSVLLGEKEREYALHSNPRYNKHHLVP
                     FGEYVPFGSVLDWMREVFILPINLSQGSFVQPSFLAKNNRFNMAICYEIIFGDQLQQN
                     QKSQNSDYLLTITNDAWFGSSIGPWQHFQMARMRALELGKPLLRAANTGITAIVDANG
                     KVIEQLPQFTADALTATIVPTKGDTPFKQLGHWLIYSFSLFCVIASLLLRRK"
     gene            complement(10775..11674)
                     /gene="corC"
                     /locus_tag="PXD18_001165"
     CDS             complement(10775..11674)
                     /gene="corC"
                     /locus_tag="PXD18_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249295.1"
                     /note="CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter
                     (CNNM) family, and was characterized as belonging to a set
                     of three proteins, at least one of which must be present
                     for CorA to function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family magnesium/cobalt transport protein
                     CorC"
                     /protein_id="HDL6301607.1"
                     /translation="MSDEQQSVNTTEKSEKKSILHSLFSGLFQNEPKNREDLVEVIRD
                     SVENELIDSDTKEMIEGVMEISELRVRDIMIPRAQIVFIDANEPLDVCIDLIIESAHS
                     RFPVIRGEKDTIEGILHSKDLLKYLRSDSEPFNLQQVLRPAVIVPESKRLDRMLKEFR
                     SERFHMAVVVDEFGAVSGLVTIEDILEQIVGDIEDEFDEEEVKPIRQLSRHTYAVLPL
                     TDIKKFNEFFATDFNDEEVDTIGGLVMQAFGYFPKRDEQIELNGIDFKVTSANSRQLI
                     QLRVTLSDEQLEKMEKTSPNEEE"
     gene            11812..12420
                     /locus_tag="PXD18_001166"
     CDS             11812..12420
                     /locus_tag="PXD18_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2057 family protein"
                     /protein_id="HDL6301608.1"
                     /translation="MKLTKIALSLTALVVSSMSVAGTLSTSSMVDILAFDGQRVKSGT
                     TSVQMSENKTHQVVVEVGGTVEGDFFTSDQIILTFQGSAENAKLETPRLNSKLDLRKF
                     QENQTVAIKTDSGKVISHKQDFLKGEGFLAKTRVEDNLTKYNLAKKTASVEQFATAPL
                     EAKGQIVVDTNKVSQEELQLLFRKADKDTQKRFLEWAKKNIK"
     gene            complement(12501..12884)
                     /locus_tag="PXD18_001167"
     CDS             complement(12501..12884)
                     /locus_tag="PXD18_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301609.1"
                     /translation="MKTLKLGCIFSLALMLSSCTLTPEQQAERKAKQIRAEQDLQVQL
                     AKQCDVETAELMYQQFNPPLSQTEQEEKAFKKRYAEKVNAPMFQACYKLAWQNYKAQV
                     ELEEIRWNYDRDYMYRGWRYCYYCW"
     gene            complement(12914..13483)
                     /locus_tag="PXD18_001168"
     CDS             complement(12914..13483)
                     /locus_tag="PXD18_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HDL6301610.1"
                     /translation="MNETTINDFSLLCRLFGNLFYRHPTDPILAGTFNWLAQGGLRQV
                     WALNTDSQSENALTLLQKNANPTQLAASYQALFAENGAISPTISAYGLSVNNFVAFRQ
                     ERAMPELENADHIGLLFLTASWIEDNLDSALAQKILFEQFLLPCAGKFLGKIEAFDNG
                     FYKALAQLSRDALSAMADELEESELEAVE"
     gene            13542..14387
                     /gene="nfo"
                     /locus_tag="PXD18_001169"
     CDS             13542..14387
                     /gene="nfo"
                     /locus_tag="PXD18_001169"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HDL6301611.1"
                     /translation="MKYIGAHVSASGGVENAVLRSVEIGANAFALFTKNQRQWQAPAL
                     KAETIEKFKRFCKVHHFSAEQILPHDSYLINLGNPEAEALEKSRVAFIDEMSRANQLG
                     LKLLNFHPGAHLKQISEQDCLARIAESINIAVEKVPNVIAVIENTAGQGSNLGWHFDH
                     LATIIEQVEDKSRVGVCLDTCHLFSAGYDISSYEKSEAVFNDFNQTVGFHYLRGMHLN
                     GSKTPLGSRVDRHHTLREGTIGTEVFAFIMQNMHFNHIPMILETISPEIWADEIKFLR
                     TLELK"
     gene            14515..15087
                     /locus_tag="PXD18_001170"
     CDS             14515..15087
                     /locus_tag="PXD18_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL6301612.1"
                     /translation="MKKNLFATTFKPVFIASILSVFGGYSSIAVASLSSKPATPNQII
                     ASKAERLAKSSSVFTNRANLPTSSAHTANYSGRINSVYHNWVGTRYRLGGTTKAGIDC
                     SAFVREVMGKAFSKDMPRSTAEQRHVGHSISKSDLRPGDLVFFRKNNHVGVYIGNGKF
                     VHASSSRGVTTSSLSESYWSRNYTQSRRVI"
     gene            complement(15154..15612)
                     /locus_tag="PXD18_001171"
     CDS             complement(15154..15612)
                     /locus_tag="PXD18_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6301613.1"
                     /translation="MASIRQISDQTAAYQPIPLYRDFNSSRSVKLDLNSLCIKRPRDT
                     FFIHVKNPNLIAWGIELDDLLIVEQTNQYLVNDLLVLEKDGEYKFYQFFNEIQNGEGI
                     AEKILFSLDVSESNLRITDWAEVKIAGVITNVVHQMRTRGAFTQAKQRVA"
     gene            complement(15786..16169)
                     /gene="grcA"
                     /locus_tag="PXD18_001172"
     CDS             complement(15786..16169)
                     /gene="grcA"
                     /locus_tag="PXD18_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autonomous glycyl radical cofactor GrcA"
                     /protein_id="HDL6301614.1"
                     /translation="MIKGVQITESSNSNLLNSFWLLDEAKNEARCLAAKAGFEEDQVV
                     AISELGDIAYREVPVNVAPTIKVEGGQHLNVNVLRRETLEDAIQNPEKYPQLTIRVSG
                     YAVRFNSLTPEQQRDVITRTFTESL"
     gene            16328..17017
                     /gene="ung"
                     /locus_tag="PXD18_001173"
     CDS             16328..17017
                     /gene="ung"
                     /locus_tag="PXD18_001173"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDL6301615.1"
                     /translation="MKTWTEALGEEKQKAYFQQILQYVHNERLAGKVIYPPQNEVFSA
                     FALTEFSDVKVVILGQDPYHGPNQAHGLAFSVKPPVAPPPSLVNMYKELSEDIEGFQI
                     PPHGYLIDWAKQGVFMLNTSLTVEQGRAGSHSQIGWEIFTDKVIAQLNQHRDNLVFLL
                     WGSHAQRKGQFIDRNRHCVLASPHPSPLSAYRGFFGCKHFSKANNYLISQGISPINWQ
                     LSVDVSYSSTH"
     gene            17033..17953
                     /locus_tag="PXD18_001174"
     CDS             17033..17953
                     /locus_tag="PXD18_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HDL6301616.1"
                     /translation="MNFDLPIVSIAFVVLVLVALSSTIKIVPQGYHWTVERFGRYTKT
                     LSPGLNIVVPFIDRIGRKMNMMEQVLDIPSQEVISRDNASVAIDAVCFVQTVDARRAA
                     YEVNHLEQAIVNLTMTNMRTVLGSMDLDDMLSQRDLINGRLLSIVDEATNIWGVKVTR
                     IEIRDVRPPKELVAAMNAQMKAERNKRADILEAEGIRQAEILRAEGEKQSRILKAEGE
                     RQEAFLQAEARERAAEAEAKATQMVSEAIAKGDTTAINYFIAQKYTEALKEIGSSDNS
                     KVVLMPLEAGNLIGSVAGIAEILKSNKTSS"
     gene            17989..18426
                     /locus_tag="PXD18_001175"
     CDS             17989..18426
                     /locus_tag="PXD18_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HDL6301617.1"
                     /translation="MDWFFNWIGWSILGFVLLALELVLPGVFIMWWGFASLILAFIVA
                     LFTLGQALQIALFAIIATIFSLIWWKYQHGKDKKEDQSSSLNSREHAMLGAQGFVVEI
                     LPNGIARGKFGDTTWRVIGNNLQVADKIEVQKVEGITLFVRKQ"
     gene            complement(18567..21371)
                     /locus_tag="PXD18_001176"
     CDS             complement(18567..21371)
                     /locus_tag="PXD18_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDL6301618.1"
                     /translation="MYKIKHSFNKTLIAISISSFLSIAYATESIENPQPIIQLSESLS
                     SKYSGKGVKLGVMDEGFMVKHPRHSSHLHPLIHQLTTPEGEVRIYDASYPQFEVNPVE
                     KEDGIDLIPSLETHGAGVAGIIAAQADKTLGDGYSGGIAKGAELYVATKSYKRTLEKV
                     IQDAKKELENAKDEEDEKTPSLDQMAKNDLLASKEKEMAIERAEWASGLNKLLDNNVF
                     AINNSWNPFSISDDINVVDKFYQSIKQNKHNPLLQAIMRAKNSNTLLVFAAGNESKKQ
                     PGVMALLPRYFPELEKNLISAVAVDKEQKIASYSNHCGASKNWCVAAPGDLHVLIGVA
                     DEHKKPQYGLTKEQGTSFSAPAITASLAVLKERFDYLTATQIRDTLLTTATDLGEKGV
                     DNVYGWGLINLKKAVNGPTQFLNDETITVTRDDHWSNPLASQFKITKKGDKSLHLDGE
                     NHLDTVAVEEGRLALNGKTKVKTISNHANLAVNGTEVEQNYSSSGQSQLEVLGKSGLI
                     ANAQANIHLAGSLKIDDKLTEKTEAGDVSATVVQLKDKATYQGGFTQLVENENLAKRG
                     LIQDLYFKESEIIAKVNKPLTDEKADTNGQAGLALLNALRTTPIAYRRSWYNGWLQSA
                     LEQRKLDNLHYAVSNNIYADSLELLRSQNAKGLTQAQQHLFTAYHTPLQTTVWAEHLN
                     QKQSASSKHTDVKHHQSQLGVNHKLADKTVLSATLSQQKNRLEKPFAQATLKQTALNI
                     GLRYHLDNAWFSEATLQFARQKYQQSRRFASHQLGTAETRGSTLGGEMRIGYQFMPNQ
                     WIIEPSLGVQWIQTKMNGLNESGELATQTAAMRYRDVNIVPSVKLQRTFQLEQGSISP
                     YIGLNYLHRLNGKITKITSNIAGKTLHSEATTKRNRQLNGEVGVKLHYKNWFTAMNLD
                     YSRVKSANLFGWKVNVGFSF"
BASE COUNT         6280 a         4096 c         4443 g         6553 t
ORIGIN      
        1 aatgtcggtt tgaaatctaa ataaagatcc caatgtcccc gctgcgagag ataagtggat
       61 actttatctt ctaagatcat atctaccacg tttgcttgag agaaaatcaa tttgttacga
      121 gatgtaacta aaaccgctat ttttacattt gggagagctt ttttaatttg ctccaaatga
      181 gctatatgca caacagcatc gccaatagca tctccgatag gtttgagtaa tacggattct
      241 attttgctaa atttgaaggt ttttttctct ttttttgtac caaaaagttt tataactaag
      301 gatttcatct ctataatagg ttgattcttt taatgattgg ttatagtaag taaaaatgaa
      361 tattaaagca acgttaagaa aagcaagatt ggtgataggt aaagccattt tagatagtaa
      421 aaatactgat ctgatattat cggaaattcc caataaaatt ctatttcttc gtcacgatgg
      481 taaaattggt gattatgtcg ttagttcctt tgtcttccgt gaaataaaaa aacagtctcc
      541 ccaaacgcaa ataggcgtgg tttgctcaca gaaaaaccga tatttatttg agaataatcc
      601 ttatattgat aagctctatt tggttaagac aaaaagtatt cctgattata ttcgtggtgg
      661 caaacaactt gcaaaagagc agtatgatgt tgtaatcgat ccgactgtta ctttacggaa
      721 tcgtgatctc ttatttttac gcactatatc agccaaacat tatgtaggtt atcagaaaca
      781 aaaatatcga ttatttgatc taaatgtaga ggatagaaaa cagcattttt cagagattta
      841 tcaagatgcg ttagctttaa tcgggtttga aaatatagaa actcagtatg atgtgccact
      901 aaatgccaca agcaaccaat ccataaagca ttatttatat gaaaaccaaa ttagaaatta
      961 tattgcgtta aatctttttg gtgcaggttc ggcaagacgt tttagtgagc agaaaattaa
     1021 tgaactgctg agttgcttaa aacagcatag tgataaaccg atagtcttac ttacttttcc
     1081 tgaagtaacg gcaaaattgt gttcctttac taagaagtat aaaaatatat ttgtctatga
     1141 gaaaaccaaa agcgtttttg attcaataga actgattcgt tttgcggact tattaatttc
     1201 acctgatact gcaaccgtgc atattgcctc aggcttgagt aaaaagataa ttgcttttta
     1261 cagtagcgat gaacagaatt ttatacattg gcatccgaat aatcaggctg aaacccatat
     1321 tctccgtttt agaaaaagcg tgaatgattt agattttgct gcaataaaac cggagtggct
     1381 aaaataatat ggacttccaa agccttaaac ttttcctaga tatagcccaa agccgtagtt
     1441 ttattcgcag tgcggagaag aattatatga cggcttccac acttacccgc catattcagc
     1501 gtatagagga ggagctcggg cagccgttgt ttctgcgtga taatcgacaa gtgcgtttaa
     1561 ctgaagcagg ggaaaggttt ttggcgtttg ctcaacaagg ttgggcagag tggcagcagt
     1621 tgcaaaacca gttgtcgcct gctcaaggtg atttagaagg agagttgaaa gtgttctgct
     1681 cggtaacggc ttcttacagc catttaccgc cgattttggg aaagtttcgc caaaaatatc
     1741 cgaaagtgga tattaaactg agtaccggtg atccggcttt ggcattggaa caggttcagt
     1801 cattggctgc agatatttcg gttgcgggta agccggaatt tctgccgaat aatattgtgt
     1861 ttcactatat tgatgatatt caactttcga ttattgcccc tcgtgtggcg agccaagcca
     1921 ctcaatttct gcaacagtcg ccgatagatt ggaaaaatat cccctttatt ttgccggtga
     1981 acggacctgt acgaaaacgg attgaccgtt ggtttaaaga gcaaaaaatc aaagacccga
     2041 ttatttatgc taccgtctcc ggacacgaag cgattgtgcc gatggttgca ctaggctttg
     2101 gggtcgcact gctaccggat attgtgatta agcatagccc aatgaataat caagtttctt
     2161 atgtgaattt accctcgccg atcactccgt ttgagctggg aatttgcgtt cagcaaaaac
     2221 gcttgcaaga gccgatcatc aacgcatttt ggcaattatt gtctgataat tcagcataac
     2281 aagcggttag attttgctaa atttttgcaa aaaatagagc aaaaccgacc gcttgtagat
     2341 aaaactttca gataaaaaat aaggtgcgtg attgtgatct gcgcacctta tgttgtttta
     2401 gattattgca ctttattgca ctgtggcttt agctcgcgat tttttcacct tgatctcggc
     2461 ttttgacaag atttcaatcc ccattggcgg gttttctagt gccagagcta gtacctcgtc
     2521 aatggtttct actgcgtgaa tgtccaacgc tgcttttgca ttttccggaa tttcctctaa
     2581 gtctttttca ttttctttcg gaataatcac cgtcgtaata ccaccacgat gggctgccag
     2641 taatttctct tttaagccgc cgattggcaa tactttgcca cgcaagctga tttcaccggt
     2701 catcgctact tctttacgca cagggttacc tgttaggctg gaaattaatg cagtacacat
     2761 tgcaatccct gcactcggac catctttcgg tgttgcaccg tccggcacgt gaacgtgaat
     2821 atcccgtttt tcgtggaagt cttcagcaat gcctaatttt tctgcacgag agcgtacaac
     2881 caccattgcc gcttgaatag actctttcat tacatcgcct aatgaaccgg tgtaagagaa
     2941 tttgccttta cctgcaacag aagcggtttc aatggttaat aaatcaccgc caacttctgt
     3001 ccacgctaaa ccggtcactt cgccaatgcg gttttggcta tccattttgc cgtagtcaaa
     3061 acgttttacg cctaagtatt cttcgatatt tttctcagaa actgtaatgg attttaattt
     3121 cttatccaat actaaagctt tcacggcttt acggcagatt ttcgcaattt cacgctcaag
     3181 gctacgcacg cctgcttcac gggtgtagta gcggataata cttaaaattg cactgtcttc
     3241 aatggtcagc tcaccctctt ttagtccgtt attttcttgc tgtttagcca gtaaatgacc
     3301 acgagcaatg tgcattttct catcttcggt atagcctgaa agacgaatca cttccatacg
     3361 gtcgagcaat gctggcggaa tgttcattga gtttgaggtt gccacaaaca ttacatcgga
     3421 taaatcgtaa tccacctcta aataatggtc gttaaaggct ttattttgct caggatctaa
     3481 cacttcaagc agagcagaag ccgggtcgcc acgcatatct tgagccattt tgtcgatttc
     3541 atctaacaag aacagcggat tacgcacgcc gactttcgcc attttcatca ttaggctacc
     3601 cggcattgag ccgatgtaag tacggcgatg cccacggatt tccgcttcat cacgcacgcc
     3661 acctaacgcc atacgcacat atttacgccc tgtggcattg gcaatagatt gccctaatga
     3721 ggttttacca acccccggcg gaccaactaa gcacaaaatc ggacctttta atttatttag
     3781 acgactttgc actgctaagt attctacaat ccgctctttc actcgttcta agccgtagtg
     3841 gtctttatcc aaaatctctt gagcttgggc taaatctttt ttgaccgctg attttttatg
     3901 ccacggcatt tgtaaaatcc agtcaatata accacgcaca acggtagctt cggaagagct
     3961 ttgcggcatt gctttgagct ttttgaactc cgtattcagc ttgtctttta cctcggtcgg
     4021 taattttgca gcgtcaattt tctctttaag cttatctaac tcgctttgtt caacgtcatc
     4081 gccattacct aactcttttt gaatcgcttt aatttgctcg ttgaggtagt aatcacgttg
     4141 gtttttttcc atttgctgtt taacacgatt acgaatccga gtttcggttt caagcgtatc
     4201 catctcagtt gccatcgcaa ttaacaaggc ttcaaaacgg gcaatcagat ttggttgctc
     4261 caataattcc tgttttttct tcaccggagc aattaagtta gaggcaatgg tatccgccaa
     4321 gcggtcttcc aacgtgattt tttgcagttt agcaataatt tccgccggaa ttttcttgtt
     4381 atttttaacg taattttcaa attcggttaa agtggtttta gcaatcgctt ttaactcttc
     4441 gttttcgtca tcatattccg aatatattgg ctgaattgcc gcccagaagc cgttttcatc
     4501 atcgtgaatt tgctcgattt tggcacgggt ttgtccttct accagcactt taactgtgcc
     4561 gtccggcagg tttaacattt gaataatgtt ggcaattaca cctacgccat acatatcttc
     4621 tgcattcggc tcttctttat ttggatcttg ctgagtgact aaaaacagtt gtttattgga
     4681 atccatcgcc gagcgtaggg cttgaattga tttttcacgt cctacaaata acggcataac
     4741 catataagga aaaaccacca catcacgcaa tgggagtagt ggtaattcaa tcgctttctt
     4801 ttttcttggt gccataaatt tgctctctct atcaaaatat aatcccccat tatgagggcg
     4861 aatttgggaa aaacaaggga aaatttgatt tatcttaaaa aaactcgaat agtcaaaaca
     4921 gtagatgttg gcgatttaat caattgttaa aatcagggta attagcttaa tttcccgctt
     4981 gacatcaaat cgtaatgcga gcaaaatccc ctgcatattt taatcttcag ggcagggtga
     5041 aattcccgat cggcggtaaa gtccgcgagc cgagcaatcg gcaggatttg gtgaaattcc
     5101 aaaaccgaca gtatagtctg gatgaaagaa gagtcaaaaa ccgcaaaaaa taccgcacaa
     5161 gcggtcattt tttgtgtctt ttttgcaagc cttgagtcgt gagatttcaa ggcttcattg
     5221 ttttgcaggc ggcgtttgca aattttttac taaaaacgac cgcttgtatt gcaataatcc
     5281 tttcattacg ccctcaattt atcaaaatgt atatgacaga tgttcaatat atggcttatg
     5341 ccatcaccct tgccgaaaaa gcacggggtt ggacaagccc taatccgcta gttggctgtg
     5401 tgatcgtgaa aaacggcaac attatcgccg aagggtatca ccaaaaagcc ggtagttggc
     5461 acgctgaacg caatgcgatt ttaaactgcg aggaagatct gacgggggca accgcttatg
     5521 taaccttaga gccttgttgc caccacgggc gaaccccgcc ttgttccgaa ctgctgattg
     5581 aacgtgggat caaaaaagtg tttatcggct ctcgagatcc gaacccactt gtttctggca
     5641 aaggagcggc acagcttaga gccgccggca ttgaggttgt ggaagacttt atgcgaacgg
     5701 agtgcgatgc gctgaacccg attttcttcc attacattca aaccaaacgc ccttatgtgt
     5761 tgctgaaata tgggatgacg gcagatggta aaattgcgac ttatacgggg aattcgaaat
     5821 ggatcaccgg cgaggctgcc cgagctaatg tacagaaaag ccgccacgaa tatagtgcga
     5881 ttatggtcgg ggtggaaacg gtgcttgccg atgacccaat gctcaacagc cgaatggaaa
     5941 atgctaaaca gccggtgcgg attgtatgtg acagccaact gcgtacccca ttggatagcc
     6001 aactagtcca aactgcacgc caatatcgca ccattattgc tacgctcaat aatgatgcaa
     6061 aaaagcaggc agaatatacc gcttgcggtg ttgaaatttt agtgacaggc gaacgtgaca
     6121 agcgggtgga tttagccgat cttttgcaaa agctgggcga actcgggatc gacagcttat
     6181 tgattgaagg tggttcgcaa ctcaatttca gcgtgctgga acaggggtta gtcaatcgag
     6241 tacattgcta tattgccccg aaactgattg gcggcaaagc ggcaaaaacc ccgattggtg
     6301 gcaaggggat tggcgagtta gcacaagcgg ttaaattacg tctaaaatcc accgaattgc
     6361 tcggagaaga tattttgttg gattatgaag tggacttgct tcgtaattaa attgaaattt
     6421 ccttactctc gcccgtttac gggagagaga cagcataaaa tttcgttcag aaattttatg
     6481 cagagagagg ggaaaatgag tgtaatcttc cctctccctc cgaaaatcct acggattttc
     6541 tcttccctct cccgtaaacg ggagagggga atagtaagat aagcagttct cagactaaat
     6601 tggaagtaaa tcggagaaaa atttaaatgt tcacaggcat tatcgaagaa gttggccaga
     6661 tagcccaaat taagaaacaa ggcgagtttg tggtggtaac ggttaaagca aaaaagattc
     6721 tgaccgatgt acatttaggg gatagcattg cggtaaatgg cgtgtgttta accgtgactt
     6781 catttacgca ggagcaattt actgctgatg ttatgtcaga aaccttaaaa cgtacatcac
     6841 ttggcgaatt aagtatcaac agctcggtta atcttgagcg ggcaatggcg gcaaacgggc
     6901 gttttggtgg gcatattgtg tcaggtcata ttgatggcac gggtgtggtt gcagagatta
     6961 caccagcaga taattcaact tggtatcgca ttaaagccga acctaagtta atgcgttaca
     7021 tcattgaaaa aggctcaatt actattgatg gcattagttt aacggtggtg gatgttgatg
     7081 cggaatcttt ccgggtatcg attattccgc ataccattaa ggaaaccgac ctcggtacga
     7141 aaaaaatcgg tagtttggtg aatttagaaa atgacattgt cggcaaatat atcgaacagt
     7201 ttttattgaa aaaagagcct gaaaatccgc aaagtaaaat tactgcggac tttcttaaaa
     7261 atgcagggtt ttaaccaaat aaaggacaaa taatgtttaa gttttcaacg gtagaagaag
     7321 caattcaagc aattgcacaa gggaaaatta ttttagtcag cgatgatgcc gaccgtgaaa
     7381 atgaagggga cttcatttgt gcagcggaat ttgcgacacc ggaaaatatc aactttatgg
     7441 cgaaatatgg taaagggttg atttgtacgc cgatttcgac agaaattgcc aaaaaattaa
     7501 attttcaccc gatggtgcta gagaacgaag ataatcatca aaccgcattt accgtttctg
     7561 ttgaccatat tcaaaccggc accggtattt ccgcttttga gcgttcatta acttgcctga
     7621 aaatgcttga tgaaaatgct aagccggaag attttagacg tccggggcat gttttcccat
     7681 tagtggcaaa agacggaggc gtattagtgc gtaacggtca taccgaagca actgtggatt
     7741 tagctcgttt ggcgggcttg aaaccggcag ggctttgctg tgaaattatg gcagaagacg
     7801 gcacgatgat gcagatgccg gaattacagg catttgcaca agcacacaat atgccgttta
     7861 ttactattca gcagttacaa gagtatcgta gaaaacacga cagcttggtg aatgtggttt
     7921 cggtggtaaa aatgccgacc aaatacggtg agttcaaagc acacagtttc gttgaaacta
     7981 tttcaggcaa agaacacgtc gctttagtta aaggtgatat tggtgatggc gaaaatgtat
     8041 tatgccgtat ccattccgaa tgtttaaccg gcgatgcctt tggctcacaa cgttgcgatt
     8101 gtggtcagca gttcgcagcg gcaatgaacc aagtggagca agagggcaga ggcgtggtgc
     8161 tttatttacg ccaagaagga cgtggcatcg gtttaattaa taaactgcgt gcttacgaat
     8221 tgcaagatag aggaatggac acggttgaag ccaacctggc attaggtttc aaagatgatg
     8281 agcgtgaata ttatatcgcc gctcaaatgt ttgaaaaatt aggcgtaaaa tcgattcgtt
     8341 tgttaaccaa taatccggca aaaattgaag gactcattga gcaaggttta aacgtagtgg
     8401 ctcgtgagcc gattatggtt gagccaaacg aacacgattt ggaatacctt aaagttaaac
     8461 agcacaaaat gcgacatatg tttaatttct aatccaatac tctctcccct tgtgggagag
     8521 agacagaaaa atacttcgtt cagaagtatt tttcagagag agggtatatt ttttagaaaa
     8581 agtttgcaat ttcccctctc cctgattttt cttctgaacg aagaaaaatc tatccctctc
     8641 ccacaagggg agagggttat tgagtatcaa atttatttta aagaaggaaa acaaacaatg
     8701 gcaacatttc aaggaaacta catcgcaact ggtttaaaat tcggtattgt ggcaactaac
     8761 tggcacaaga tttttatcga tcaactgtta aacggtgcaa ccgataaatt attgcgtcac
     8821 ggcgtagaag aaaaaaatat cgacaccgta tgggtgccgg gtgcattaga aatctcaatt
     8881 gcagcgaaaa aaatggcaca aagcggtcgt tatgatgcga ttatctgctt aggtgcggtc
     8941 gtgcgtggag caaccagcca ctatgatgtg gtagtgaacg agtcagcaaa aggcatcagc
     9001 tcttctgctt tagaaaccgg cgtgccgatt attaacggta ttttaacggt ggaaaattta
     9061 gagcaagcga ttgagcgttc aggcactaaa gccggtaata aaggcgaaga gtgtgcaatg
     9121 gtagcgattg aaatggcgaa cctattaaaa gccttagcgt aatcagcgat aaaatcccct
     9181 tagacccaag agcctaaggg gattttttta ttttctgcgt agtaacaggc tggcaatgac
     9241 acaaaatagg ctgaaactgt aaattaacca gtgacctaat tgtttaaacg gcgtatcgcc
     9301 tttggttggc acaatggtgg cagttagtgc atcagcagta aattgcggta gttgttcaat
     9361 tacttttccg ttggcatcaa caatggcggt aataccggta ttcgcagctc gaagcaatgg
     9421 tttgccaagt tctaacgctc gcattcttgc catttggaaa tgttgccaag gcccgatgga
     9481 agaaccaaac cacgcatcat tggtgatagt taataaataa tctgaatttt ggcttttttg
     9541 gttttgttgt aactgatcac caaaaataat ttcatagcaa atcgccatat taaatcggtt
     9601 gtttttcgcc aagaatgatg gttgaacgaa actgccttgt gaaagattaa ttggtagaat
     9661 aaacacttcc cgcatccaat ccagcaccga gccaaacggc acatattcgc caaacggcac
     9721 aaggtgatgt ttgttgtagc gagggttgct gtgcagggca tattccctct ctttttcgcc
     9781 taatagcacg ctactgttaa acagttcctc ttgctcattt tgatagagtg tgccgataat
     9841 aatttcactt ccgtgttggc gagctaagtg atcgagcgag ccaagcagcg ggctgatttg
     9901 attttcaagt gccggaatgg cggattcagg caaaataatc agttcactgt tacctaatag
     9961 gggcagaatg agctgttcgt aggttcgtac gctgtggttg aaatgttgcg gatcccactt
    10021 cattttttgc tcaatattcc cttgtactaa actcactaca agcggttgtt tttctgtatc
    10081 aatttgcaca aattggagaa agcgagtggc aaaacttaag ccaaaaatga ccgctagtac
    10141 catcaatgat ggcacagttt tgttctcttg ctgaataatt ttcactagat agctacttgc
    10201 aactattacc aagaaagtca aaccttcaac gcccaaaatc ggcgcaatac cagcaaaggg
    10261 gctgtctatt aagctatagc cgaattgtag ccacggaaaa ccggtaaata ccacgcctcg
    10321 taaatattcg gtaaaggtaa aaatcgcagc caatgcaaac ggattattca gtttgagcct
    10381 gtgtgaaact acactaaaca gcagattata aatagcgaga tagcacgcca acaggaatac
    10441 tgctatgtag cttactatgg taggaacacc accaaattgg gtcatactca cagaaaccca
    10501 gtttacaccg gtgcagaagt agccgataga ccaagcaaag gttgcccata atgcggtttt
    10561 tctgtttgcc agagtggctg accaaaccaa gccggctgcg gaagcaaagg caagaatcca
    10621 aatatcaaaa ggcgaatagg cgaaagtgcc gattgcaccc agtatgattg caaggagaca
    10681 agcggttaaa aaaggcggat tttttgcaaa attcataata actcactaaa taaatgaggc
    10741 acgccgaaac gtgccttgat tgaaactcac tatattattc ttcttcgtta ggagaggttt
    10801 tttccatttt ctctaactgt tcatcggaaa gtgtgactcg tagctgaatc aattggcggc
    10861 tattagctga ggtgacttta aaatcaattc cgtttaactc aatttgctca tctcgtttcg
    10921 ggaaataacc gaaagcctgc atcactaaac caccaatggt atccacctct tcgtcattaa
    10981 agtcggtagc aaaaaattca ttgaattttt tgatgtcggt gagcggtaat accgcataag
    11041 tatgtcttga aagctggcga attggtttga cctcttcttc atcaaactca tcttcaatat
    11101 cacccacaat ttgttcaaga atgtcttcaa tggtgactaa gcctgaaacc gcaccaaatt
    11161 catcaaccac tactgccata tggaagcgtt ctgaacggaa ctcttttagc attcggtcta
    11221 ggcgtttgct ttccggtaca ataaccgcag ggcgtaatac ctgttgcaga ttaaagggtt
    11281 cagagtcaga acgtaaatat ttcaataaat ctttagagtg aagaatacct tcgatagtat
    11341 ctttctcacc ccgaatcacc ggaaaacgag agtgtgcgga ttcaataatt aaatcaatac
    11401 agacatctaa aggttcattg gcatcaataa acacaatttg cgcacgggga atcataatat
    11461 cccgcactcg taattccgag atttccatta ctccttcgat catctctttg gtgtcgctgt
    11521 cgatcaattc attttcaaca gagtctcgaa tcacttcgac tagatcttca cggtttttag
    11581 gctcgttttg aaaaagcccg ctaaatagag agtgtaaaat cgattttttt tctgattttt
    11641 cggtggtgtt tacactttgc tgttcatcac tcatagtttg ttccacttaa ataaagtacg
    11701 cttataataa gcaaattcag tcacaaagca aataaaacat tgctattttc actcaaatta
    11761 gcataggata agcaaaaatc tttttatttc ttcatatttt aggagtttga aatgaaatta
    11821 accaaaatag cattaagttt aacagcctta gttgtcagtt cgatgagtgt ggccgggacg
    11881 ttaagtacat catcaatggt ggacatttta gcctttgacg ggcaacgtgt taaatccggc
    11941 acgacttcgg ttcaaatgag tgagaataaa acgcatcaag tggtagtgga agtcggtggg
    12001 acagttgaag gggatttttt cacctctgat caaatcattt tgactttcca aggcagtgcg
    12061 gaaaatgcaa aattagaaac gccaagatta aattcaaagt tagatcttcg taaattccaa
    12121 gagaatcaga ctgtggcaat taaaaccgat tcaggtaagg ttatttcaca taaacaagat
    12181 ttcttaaaag gggaaggttt ccttgcgaaa acaagagttg aagataattt aacgaaatat
    12241 aacttagcga aaaaaacagc ttcagttgaa cagtttgcga cggcacctct tgaagcaaaa
    12301 ggacaaattg tggtggatac aaataaagtt tcacaagaag aattacagct tttatttaga
    12361 aaggcagata aagacaccca aaaacgtttc ttagaatggg cgaagaaaaa tataaaataa
    12421 acctatatca attaataagc ggtcatttct cgccaatttt ttgcaaggtg ttaaaaaaat
    12481 gaccgctcat acaatgagat ttaccagcaa taatagcagt aacgccagcc tctatacata
    12541 tagtctctat cgtaattcca acgaatttct tcaagttcta cttgtgcctt gtaattttgc
    12601 caagcaagct tataacaggc ttggaacatt ggggcattga ctttttcggc atagcgtttc
    12661 ttaaatgctt tctcttcttg ttcggtttgg ctaagcggcg gattaaattg ttggtacatt
    12721 aactccgccg tttctacatc acattgtttg gcgagctgaa cttgcaaatc ttgttctgcc
    12781 cgaatttgct tcgctttacg ttcagcttgt tgctctggag ttaaagtaca gctacttaac
    12841 ataagtgcga gtgaaaaaat gcagcctaat ttgagtgttt tcattgctga atcctctagt
    12901 tgaaattggt gatttattct accgcttcta actcactttc ttcaagttca tcagccatag
    12961 cactaagggc atcacggcta agttgtgcga gggctttata aaaaccattg tcgaaagctt
    13021 ctatttttcc taagaatttg cctgcacaag gtagtaaaaa ttgttcgaat aatatttttt
    13081 gagctaaggc agaatcgaga ttatcttcga tccaagatgc cgtgagaaat agtaacccaa
    13141 tgtgatcggc attttctaat tcaggcattg cccgctcttg tctaaaagct acaaaattat
    13201 taactgataa tccataggct gaaattgttg gagaaatagc cccattttca gcaaaaagcg
    13261 cttgatagct tgctgctaat tgcgtagggt tagcattctt ttgtaagaga gtcagcgcat
    13321 tttcactttg gctatccgta tttaatgccc agacttggcg taatcctcct tgggcaagcc
    13381 agttaaatgt gccagctaaa atagggtcgg tagggtgacg ataaaataag ttgccaaaca
    13441 aacggcaaag cagggaaaaa tcgttaatgg tagtttcgtt cataatttga aatagataga
    13501 aaaaagaatt gttagtatag cagaacacaa gagaggactg aatgaaatat ataggcgcac
    13561 acgttagtgc ttcaggtggg gtggaaaatg cagttttgcg ttccgtagaa attggtgcta
    13621 atgcatttgc gttatttact aagaatcaac gtcaatggca ggcaccggca ttaaaagccg
    13681 aaactatcga aaaatttaag cgtttttgta aagtgcatca tttttcagca gagcaaatct
    13741 taccacacga tagctatttg attaatttag gaaatccgga agcggaggca ttggagaaat
    13801 ctcgtgtagc atttattgat gagatgtctc gagcaaatca attaggttta aaattgttga
    13861 attttcaccc gggggcgcat ttaaagcaaa tttccgagca agattgtttg gctagaattg
    13921 cagaatcgat caatattgca gttgaaaaag taccgaatgt tattgccgtg attgaaaata
    13981 cggcaggaca gggttctaat ttaggttggc atttcgatca tttggcaact attattgagc
    14041 aagttgagga taaaagccga gtgggggtgt gtttagatac ttgtcactta ttttctgccg
    14101 gctatgatat tagttcttat gaaaagagcg aggcagtatt taatgatttt aaccaaacgg
    14161 ttggttttca ttatttaagg ggaatgcact taaatggttc aaaaacacca ttaggcagca
    14221 gagtggatcg tcatcatacc ttaagagaag gcacaatagg aaccgaagtg tttgcattta
    14281 ttatgcaaaa tatgcatttt aaccatattc ctatgatttt agagacaatt tcgcctgaaa
    14341 tttgggcaga tgaaataaaa tttctacgca cattggaact aaaataggtt atactggtct
    14401 gagtagtggg tctagcagag tctagacctt attttgttat cttttttaat cttttagaag
    14461 atttagttaa ggaatttacc gctgtaattg ttctggcgag acgagacata aattatgaaa
    14521 aaaaatcttt ttgcaacaac cttcaagccc gtatttattg cttctatttt gtctgttttt
    14581 ggagggtatt cttccattgc tgtagcaagt ttaagttcta aaccggccac accaaatcaa
    14641 atcattgcaa gtaaagcaga aagattagct aagtcttctt cagtatttac caatcgagca
    14701 aatcttccaa cttcttccgc tcatacagcg aattatagtg gtcgtattaa tagtgtttat
    14761 cataattggg tagggacacg ctatcgttta ggcggcacaa caaaagcagg aattgattgt
    14821 tccgcctttg tgcgtgaagt aatgggcaaa gcatttagta aagatatgcc tcgttcaact
    14881 gcagaacaac gccatgtcgg gcattccatt tcaaaatctg atttacgccc aggtgattta
    14941 gtctttttcc gtaagaataa ccatgtaggg gtttatattg gtaatggtaa atttgtacac
    15001 gctagttcaa gtagaggggt aaccaccagc tcattgtcag aaagctactg gtcaagaaac
    15061 tacacacaat ctcgccgtgt aatttaataa attacaattc caagatgaaa agaacactca
    15121 cttttgcgag tgttcttttt taattaaaaa agtttatgct acgcgttgct tagcttgtgt
    15181 aaatgctcca cgagtacgca tttgatgaac cacattagta attacacctg ctatttttac
    15241 ttcagcccaa tcagtaattc taagatttga ttcgctcaca tctaatgaaa ataaaatttt
    15301 ttcagcaata ccttccccat tctgaatttc attaaagaat tgatagaatt tatattcccc
    15361 atctttttca agcaccaata gatcattaac taaatattgg ttggtctgtt ctacaatcaa
    15421 taaatcgtct agttcaattc cccacgcgat taaatttggg tttttcacgt ggataaaaaa
    15481 agtgtctctt gggcgtttga tacaaagtga gttaagatcg agctttacag agcggctgct
    15541 attgaaatcc cgataaagcg gaatcggctg ataagctgcc gtttgatctg aaatttgtct
    15601 aattgaagcc atagtaaaat cctctatctg tttttttata cagggtattt tactggctaa
    15661 aataccagtg tcaaccatta ttttggaatt ttttgtaaat ttaaccagtg ttttgaccgc
    15721 ttgttatcct ttaaaaagca ataaaaaagc acccataggg tgcttcttat gcttaaaagc
    15781 tgttattata ggctttcagt gaatgtacga gtaataacat cgcgttgttg ctcaggggtt
    15841 aatgagttga aacgaactgc ataacctgaa acacggatcg ttaattgagg atatttctca
    15901 gggttttgaa tcgcatcttc taatgtttca cggcgtaaaa cgtttacgtt taagtgctga
    15961 ccaccttcaa ctttaatcgt tggtgcaaca ttaacgggta cttcacggta tgcgatatca
    16021 cctaattcgc tgatagcaac aacttgatct tcttcaaatc ctgcttttgc agctaaacaa
    16081 cgagcttcat ttttagcttc gtctaataac cagaaagagt ttaataagtt gctgtttgat
    16141 gattctgtga tttgtacacc tttaatcatt ttgatatctc ctctaagatt gaaattataa
    16201 aaaaatttta aaaattcaaa tttatttgaa gttattgtac ccctttttag ataaaaagcg
    16261 ataaaaattt aaccattttt agacatgatt gagttggttg ggtaaaaaat atacacttgg
    16321 tggttttatg aaaacttgga cagaagcttt aggcgaagaa aaacaaaaag cgtattttca
    16381 acaaatttta caatatgtac ataacgaacg attagccggc aaagtcatct atcctccgca
    16441 aaacgaggtg tttagtgctt ttgccttaac cgaatttagt gacgtgaaag tagtaatttt
    16501 agggcaagat ccttatcacg gcccaaatca agcccacgga ttagcctttt cagttaaacc
    16561 gccggttgcc ccgccacctt ctctggtcaa tatgtataaa gaattatctg aagatattga
    16621 aggatttcaa attccaccgc atggctattt aattgactgg gcaaaacaag gggtatttat
    16681 gttaaacacc agcttaacgg ttgagcaagg tagagccggt tcgcattcac aaattggttg
    16741 ggaaattttt accgataaag tgatcgcaca attaaatcaa caccgtgata atttagtctt
    16801 tctactttgg ggaagccacg ctcagagaaa ggggcaattt atcgatcgta atcgccattg
    16861 tgtgttagct tctccgcacc catcaccact ttccgcatat cgtggatttt ttggttgtaa
    16921 acatttttct aaagccaata actacttgat ttctcaagga atatccccaa ttaattggca
    16981 attatcagta gacgttagtt attcttcaac acattagttt aaggagcaaa cgatgaattt
    17041 tgatttaccg attgttagta ttgcatttgt tgtgcttgtt ttagttgcat taagttcgac
    17101 tattaaaatt gtgccacagg gctatcattg gacagtagaa cgttttggtc gttatactaa
    17161 aacgctaagc ccggggttga acattgtcgt accttttatt gatcgtattg ggcgaaaaat
    17221 gaatatgatg gagcaagttt tagatattcc atcgcaagag gttatttcac gtgataatgc
    17281 aagtgttgcg attgatgctg tatgttttgt tcaaacagtt gatgctcgcc gagctgccta
    17341 tgaagtgaat catttagagc aagcaattgt taatttaacc atgacaaata tgcgtaccgt
    17401 gctcggctct atggatctag atgatatgct ctctcagcgt gatttaatta acggtagatt
    17461 actttccatt gtcgatgagg cgactaatat ttggggagta aaagtcaccc gtattgagat
    17521 tcgggatgtt cgtccaccga aagagctggt tgcggcaatg aacgctcaaa tgaaagctga
    17581 gcgtaataaa cgtgctgata ttcttgaagc agaagggatt cgacaagctg aaattctgcg
    17641 ggctgaaggg gaaaaacaat ctcgtatttt aaaagcagaa ggtgaaagac aagaagcatt
    17701 cttacaggca gaagctcgtg aacgagccgc agaagcggaa gctaaagcca ctcaaatggt
    17761 ttctgaagca attgctaaag gcgatactac agcgattaac tattttattg cacaaaaata
    17821 caccgaagct ttgaaagaaa taggttcttc agataacagt aaagttgtac ttatgccgtt
    17881 agaagctgga aatttgattg gttctgttgc tggtattgct gaaattttaa aaagcaataa
    17941 aacaagctca tagcctaaaa ccggattaat tgagtatatg gagggagtat ggactggttt
    18001 tttaattgga ttggctggag catattaggc tttgtactac ttgcattaga attagtatta
    18061 ccgggtgtct ttattatgtg gtggggattt gcctcgctta ttcttgcttt catcgttgca
    18121 ctttttacat tagggcaagc gttacaaatt gcgttatttg cgataattgc gactattttt
    18181 agtcttattt ggtggaaata tcagcatgga aaagacaaga aagaggatca gagcagttcc
    18241 cttaactctc gagagcatgc tatgctagga gctcaaggct ttgtggttga aatcttacct
    18301 aatggcatcg ctcgaggaaa atttggtgat acgacttggc gtgttatagg taataattta
    18361 caagtagcag ataagattga agtccagaaa gtggagggaa ttaccttatt tgtccgtaag
    18421 caataagttt tttcttattt agtcatagaa cactaaacaa aaaccttgaa cagttgttca
    18481 aggttttttc tctcaagcgg ttgaaaatag agtgaaattt gcaaattttc accctaaatt
    18541 aaccgcttgt gtcccaccat aataagttag aaactaaagc caacatttac tttccaacca
    18601 aataggtttg cagatttcac tcgactgtaa tctaaattca tcgcagtaaa ccaattttta
    18661 taatgcagtt tcaccccgac ttcgccgttt aattggcgat tacgtttcgt cgttgcttca
    18721 ctatgcagtg tttttcctgc aatgttactg gtaattttgg ttatttttcc atttaatcta
    18781 tgcaagtaat ttagcccgat ataaggggaa atagagcctt gctcaagttg gaaagttcgc
    18841 tgtaatttca cgcttggaac aatattcaca tcacgataac gcattgcagc cgtttgagtc
    18901 gcaagttcgc cactttcatt taaaccattc attttggttt gaatccattg tacgccaagg
    18961 cttggttcaa ttatccattg gtttggcata aattgataac cgatccgcat ttcaccaccg
    19021 agcgttgaac ctctggtttc tgcagtacct agttgatggc tagcaaatcg acggctttgt
    19081 tgatatttct ggcgagcaaa ttgcaatgta gcttcactaa accaagcgtt atctaaatga
    19141 taacgtaagc caatatttaa tgctgtttgt tttaaggtag cttgtgcaaa tggtttttct
    19201 aagcggtttt tttgctgtga aagtgttgca ctaagtaccg ttttatctgc cagtttgtgg
    19261 tttactccca attgtgattg gtggtgttta acatcggtat gcttcgatga ggctgattgt
    19321 ttttgattca aatgttcagc ccaaacagtc gtttgcagtg gtgtatggta tgccgtaaac
    19381 aaatgttgct gtgcttgggt taagcctttg gcattttggc tacgtagcaa ttcaaggcta
    19441 tctgcataaa tattgttaga tacagcatag tgcagattat ctaatttacg ttgttcgagt
    19501 gcagattgca gccaaccgtt ataccaacta cggcgatagg caataggtgt agttcttaac
    19561 gcatttaata atgctaaacc ggcttgcccg tttgtatcgg ctttctcatc agttagtggc
    19621 ttattcactt ttgcgataat ttcgctctct ttgaaataga gatcttggat taaccctcgt
    19681 ttggctaaat tctcgttttc gactaattgt gtaaatccgc cttgataagt tgctttatct
    19741 ttcaactgta ctacggtcgc tgaaacatca cctgcttcgg ttttttctgt taatttatca
    19801 tcaattttta acgagccggc taaatgtata ttggcttgag cattggcaat tagcccagat
    19861 ttgcccaaca cttctaattg gctttgtcca gacgaagaat aattttgctc aacttcggtt
    19921 ccattgacag ctaaatttgc atggttactg attgttttca ccttagtttt accgtttaag
    19981 gccaatctac cttcttcaac tgctaccgta tctaaatgat tttcgccgtc taaatgcagt
    20041 gatttgtccc ctttttttgt aattttaaat tggctggcga gtggattcga ccaatggtca
    20101 tcacgagtta cggtaatcgt ttcatcattt aggaattgag ttgggccatt aacagctttt
    20161 ttcaggttaa tgagacccca gccataaaca ttatcgaccc ctttttcacc taaatcagtg
    20221 gcggtagtca ataaagtatc gcgaatttga gtcgcagtca gataatcaaa gcgttctttt
    20281 aatactgcta atgaagcagt tatagcaggt gctgaaaatg acgtaccttg ctcttttgtt
    20341 aagccatatt gtggtttttt atgttcatca gcaacgccaa ttaaaacatg taaatcgccc
    20401 ggtgctgcta cacaccagtt tttacttgct ccgcagtggt tagagtatga agcaattttt
    20461 tgttctttat ctaccgcaac ggcagaaatt aaatttttct caagctcggg aaagtaacgt
    20521 ggtagaagag ccattacgcc tggctgtttc ttgctctcat taccagcagc aaagactaat
    20581 aaggtgttgc tatttttggc tctcataata gcttgaagta gcggattgtg cttattttgc
    20641 ttgatagatt gataaaattt atctacaaca ttgatgtcat cgctaataga aaaaggattc
    20701 caactattat tgattgcaaa aacattatta tctagtaatt tattcagccc ggatgcccat
    20761 tcagcacgtt caattgccat ttctttttct ttgcttgcta ataagtcatt ctttgccatt
    20821 tgatccagac ttggcgtttt ttcatcctct tcgtcttttg cattttctaa ttctttctta
    20881 gcatcttgaa taactttttc taaagttcgt ttatatgact tcgttgcaac ataaagctca
    20941 gctccctttg caataccacc actatagcca tcaccaagag ttttatctgc ttgagcggca
    21001 ataataccag ctacacctgc accgtgtgtt tcaagagaag gaataagatc aattccatct
    21061 tctttttcta cggggtttac ctcgaattga gggtaacttg catcgtagat tcttacttcg
    21121 ccttcgggtg ttgttaattg atgaataaga ggatgaagat gtgaactatg gcgagggtgt
    21181 ttaaccatga agccctcatc cattacgcct agtttaacac ccttgccact atattttgag
    21241 ctgaggctct cagataattg aatgataggt tgtggattct ctattgattc tgtagcgtat
    21301 gcaatagata aaaaactaga aatgctaatt gcaataagtg ttttgttaaa tgaatgcttt
    21361 attttataca ta
//
LOCUS       DANLXD010000039        20974 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.039, whole genome shotgun sequence.
ACCESSION   DANLXD010000039 DANLXD010000000
VERSION     DANLXD010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20974
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.039"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..895)
                     /locus_tag="PXD18_001177"
     CDS             complement(<1..895)
                     /locus_tag="PXD18_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6301619.1"
                     /translation="MSKIEFEKIPNSIRKPSVLTEYNNKDAVTTLPTNEQEVLIVAPM
                     LNGEAAFTAPQKIFSDVEAENLFGKGSVAHLMVRQAIQNNPLIRLTVVGLKDHEAGIA
                     ATGQVSFTGTVTYAGVVRITIAGTAYEVAAAKGEEAQAIVARLVNVINAASYSPVVAS
                     VESETTLKLTSKAKGEISNEITLATRNTATGLTLEARAFDNGQRNALIAPALASVAGT
                     HYNVIISPFSDDENALALRSHLESVSAPIEDKPAIGVMGWRGTYATGTTLTASLNSER
                     IIVGWYKGATESNAMIAAGLGA"
     gene            complement(895..1074)
                     /locus_tag="PXD18_001178"
     CDS             complement(895..1074)
                     /locus_tag="PXD18_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2635 domain-containing protein"
                     /protein_id="HDL6301620.1"
                     /translation="MLKVKAAKGVRVPVENRPHHYIEQEAVEVENTLYYQRRIADGDL
                     IVVKETKSAKETGGK"
     gene            complement(1075..1716)
                     /locus_tag="PXD18_001179"
     CDS             complement(1075..1716)
                     /locus_tag="PXD18_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1834 family protein"
                     /protein_id="HDL6301621.1"
                     /translation="MISKIERALIERLTLGLGKMVYAVAGYAGEINDEKLDVLRLPAC
                     LVSYGGSAFEAKSMGVRGKRYQATDVFVVLVITRSMRNQTAGRLGGVTSREVGVNQLL
                     GAVKTLLINQTLDGLVHPIQPKRIRTIWNNAEVKKEKLSAYAIEFEISYNECNVLDDG
                     RFPEGVEPNEQVFKQYQGKLDEPQGDLSGFNNRIFDPNNNAETAFRTEFKDGD"
     gene            complement(1713..2138)
                     /locus_tag="PXD18_001180"
     CDS             complement(1713..2138)
                     /locus_tag="PXD18_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 domain-containing protein"
                     /protein_id="HDL6301622.1"
                     /translation="MYALVDDFVLRIGEQESIELTDREMVGVVDEATLEVALADSSSQ
                     IDGYLSGRYRLPLKTVPQNLKRICCDLARYHLTSKSLVTMTEEVENRYKLCLKELENI
                     SKGVVSLAVDETNEEESATGENTVQFFNGGNRIWGRDKR"
     gene            complement(2138..2479)
                     /locus_tag="PXD18_001181"
     CDS             complement(2138..2479)
                     /locus_tag="PXD18_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301623.1"
                     /translation="MAKPKKNDNEALNTNENTPLEDKVNEQPEDKTDEQPKPPESETK
                     PDDGALINPIAFEVKLKSIHPQATYGRCGYRFNKETAVEIARKALSDEQIITLANDPY
                     LEFVPVVEGDA"
     gene            complement(2527..3444)
                     /locus_tag="PXD18_001182"
     CDS             complement(2527..3444)
                     /locus_tag="PXD18_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu-like prophage major head subunit gpT family
                     protein"
                     /protein_id="HDL6301624.1"
                     /translation="MFKKSELLKALDTAFRKEFSAGLKVLEPQWGTVAMKVSSSTATN
                     TYAWLGQFPKMQEWVGDRQIKNMQAQGMTIENKLFESTVAVPRTAIEDDQVGLFTPMV
                     KQAAQSAAELPDDLVFSLLKKGKTTLCYDGQNFFDTDHPVYQNVDGTGTSKTQSNITT
                     GSASGKPAFYVLDDSQAIKPLIWQERTTPEIETKFDPSESDHVFMKDQYLWGVRARGN
                     AGFGFWQLIHRVEDSELNSETLEKVLTAMRTLKGDGDKQLNIRPTTLLVPPSLEFAAR
                     KLLEAELIDGTTNTLKGVLKVVVNPFIAE"
     gene            complement(3444..4514)
                     /locus_tag="PXD18_001183"
     CDS             complement(3444..4514)
                     /locus_tag="PXD18_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage protease"
                     /protein_id="HDL6301625.1"
                     /translation="MFKHKFKLNPIALSFKLNQEANGRIQLFPFGWFEAQDGRGGRWY
                     VGDENGYALADDINNTAIDLMIDYEHQTLYIAENGKGNPAAGWITKAEYISGEGLFAD
                     VKWTPQATQEIKDGVYRYLSPLFLTDGSGMVIKVLNAALTNRPALHNLQEVVAMSSQF
                     AKFLTPEEENPKMKELLIKLFALSANATDEQITEKLTALEKAKGDSPVALSDVYTELA
                     KEKSQVVALSAKVNHPDPAKFVALSDLQAVQTELNGLKQQINDKERDALIQTALSDGR
                     LLPAQKAWAEKLGKQDLVALSDFLKTVTPNPALASTQSGGEDPNKGTEKVALSAAEIA
                     AAKSLGLSEAAYIEKYKTEESK"
     gene            complement(4773..5189)
                     /locus_tag="PXD18_001184"
     CDS             complement(4773..5189)
                     /locus_tag="PXD18_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDL6301626.1"
                     /translation="MIEIQIHGIDEIIATLNRIAAKTANKTDLMRNIAGKMESAVLTN
                     FDEGGRPKWLGIKHRQGTPLVDTENLMGSITADYNNDSAIVGTNEPYAAIHQFGGMAG
                     RGRKVKIEARPFLQLTSQDRQDILDDVQAYWQKLLD"
     gene            complement(5340..6639)
                     /locus_tag="PXD18_001185"
                     /pseudo
     CDS             complement(5340..6639)
                     /locus_tag="PXD18_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248654.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
     gene            complement(6626..8251)
                     /locus_tag="PXD18_001186"
     CDS             complement(6626..8251)
                     /locus_tag="PXD18_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 domain-containing protein"
                     /protein_id="HDL6301627.1"
                     /translation="MSKKKHNKQIKPNLNPIKNQELQTDLAEITATGRVLSDHPSNFI
                     TPAKMKAIFEDTENGDITAQHELFMDIEERDSSIFANIQTRKRAALGVDWAIVAPRNA
                     TPQEEKLRDEVDELFYQLGNLEDLVMDCMDAVGHGFAALEIEWAFNGKLWYPNAFIHR
                     PQSWFKWDKHDNLLLKTRQNTEGEPLREFGWVVHTHKSRSTQAARNNLFRSLAWLYMF
                     KHYSIHDFAEFLELYGMPIRIGKYGAGATPNEKQTLKRALAEIGHNAAGIMPESMSIE
                     LHNAANAGGAAGNNPFLQMVDWCEKSIARLILGQTLTSGADGKSSTNALGNVHNEVRR
                     DLLVSDVKQLGQTFTQQIILPFLQINFGNIDPTRIPSFEFDTKEPADLALFAESLPKL
                     VDIGMPIPVQWAMDKLGIPEAQENEAVLGRSAPPQAVGLSANFPQKMTACECGCGGKV
                     HALSAQTKTGIKEQDALDDLADEAFSVPDFNAQFDPITKKAVAVVMACSSYDEAAEKL
                     AAAYPDLVSEEHDRYLANALFLADLLGAANAES"
     gene            complement(8320..9945)
                     /gene="terL"
                     /locus_tag="PXD18_001187"
     CDS             complement(8320..9945)
                     /gene="terL"
                     /locus_tag="PXD18_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HDL6301628.1"
                     /translation="MKIKEFEKELEELRRQLQQNIEASFEGWDDKPQAISERRQKVLD
                     PVHGFEYFVQAYFPHYVRSEHKSQLHHYLFENLPLSVSDLSKSVRQAIAAPRGEAKST
                     ICTQLFPLWCLVRDLKRYIIIAMDTKEQAYSMLEAIKVEIESNPRLRIDFPEVAQGKV
                     WRAGVIMTAKKQKVEAVGAGQKLRGRRHGAYRPDLVVLDDIENDESVETPAQRNKLHN
                     WVLKAVLKLGAAGEKFDVIYVGTILHYDSVLSRILNTKGWRRVRFKAILRFPGNMALW
                     DEWENIYLSEEGDDDTMSDLFYQQHKAEMDKGALVSWLARPILYLMKIRASDGHSAFD
                     SEYQNDPVSGDDAIFANSIQYWTELPDDLIYFGALDPSMGKAGASRDPSAILVGGYHR
                     ESGKLYVVEAQIKKRLPDLIIEDVIRLHSQYNCHRWFVETVQFQEFLQTELVKRSAQR
                     GKPVPATATKPNSDKMLRIESLQPHIANGLILLHRSQSTLESQLRHFPKADHDDGPDA
                     LEMLWRNALSSSAPIEWESVDDFDGEYRSKWRH"
     gene            complement(9949..10095)
                     /locus_tag="PXD18_001188"
     CDS             complement(9949..10095)
                     /locus_tag="PXD18_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301629.1"
                     /translation="MAKKKQTVVHKHYSFRWIVQLACIFGAIKLMLNGTDGWGWLLLI
                     AACM"
     gene            complement(10095..10595)
                     /locus_tag="PXD18_001189"
     CDS             complement(10095..10595)
                     /locus_tag="PXD18_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HDL6301630.1"
                     /translation="MAHDVEVQKAVRQAYVFDRLSLEMAAERAGVSFGTARRWKAAAE
                     KNGDNWEKARDVQAMASGGIENIAQGLLAGFLIKYRTLMTELEENTEMPTAAKVEALA
                     ALADSFAKMTASSKKLLPETSAMATAMRAIEMMANIVKTKKPHLLPDFLEMLDELEVQ
                     FKKEFK"
     gene            complement(10603..10857)
                     /locus_tag="PXD18_001190"
     CDS             complement(10603..10857)
                     /locus_tag="PXD18_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301631.1"
                     /translation="MSRKKQKQTDSEKLDLILGGLNELNDKVDKQNEEIERLHREIQA
                     TNRLVNEMARKNRRDAVVAGGLGGGIVAVGFELLRLKFGM"
     gene            complement(10857..11114)
                     /locus_tag="PXD18_001191"
     CDS             complement(10857..11114)
                     /locus_tag="PXD18_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301632.1"
                     /translation="MIDEKLFQMLISFVVAPLVAFVGKVIFDRINRNEQTVKELKAEM
                     ESKYQSKELAHEVNRGIKEKLDDILDSLKEVNQKLDKKADK"
     gene            complement(11107..11262)
                     /locus_tag="PXD18_001192"
     CDS             complement(11107..11262)
                     /locus_tag="PXD18_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301633.1"
                     /translation="MKLIKKLRQRWQQWRFYRRRPDLAELHNVVRAAVAQGNQHPVGR
                     AKRGRYD"
     gene            complement(11277..11636)
                     /locus_tag="PXD18_001193"
     CDS             complement(11277..11636)
                     /locus_tag="PXD18_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2681 domain-containing protein"
                     /protein_id="HDL6301634.1"
                     /translation="MITQQIAGVVGVVSTILAYAFYKSWQLKQERKLTATLKAEKQQQ
                     AVEIQQKNAEVKNAKIQQKHVSETRRIQPSAIDEQLHQHGYFRDDNGLHGVRSDLPEP
                     CGHNGNETPSACTQSDL"
     gene            complement(11633..11878)
                     /locus_tag="PXD18_001194"
     CDS             complement(11633..11878)
                     /locus_tag="PXD18_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2644 domain-containing protein"
                     /protein_id="HDL6301635.1"
                     /translation="MKQFLLDLITNKDGTASTTGFIQFMSWLVLSGILIHAYLYDKPF
                     ISDWWFAYAGICVLGSPATKGVVSALKQKERSREAEE"
     gene            complement(11881..12414)
                     /locus_tag="PXD18_001195"
     CDS             complement(11881..12414)
                     /locus_tag="PXD18_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HDL6301636.1"
                     /translation="MTEPIKNKATIADFNLAFDRLIGHEGGYVNDPKDPGGETNWGIT
                     IHTARANGYTGSMRAMSRADAKTIYLKAFWQRYNCEQFPPELAFQFLDACVNHGSGNA
                     SRMLQRAVGVADDGIIGKVTLAAIERYSVADVGLLFQAERLEFYTKLKHFDRFGRGWI
                     NRMAGNLRYFAKDTVEE"
     gene            complement(12500..12925)
                     /locus_tag="PXD18_001196"
     CDS             complement(12500..12925)
                     /locus_tag="PXD18_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mor transcription activator family protein"
                     /protein_id="HDL6301637.1"
                     /translation="MSEFESVEHYLPETVKEIVGVIGLPATEKLIKAFGGFSFQFSNG
                     KLYFNKLKEVLGQDDAVKLQAYMGACEVYLPRCETALRMLRNQQIYADYCQLTEQGGL
                     SGRLAIMQICPKYSVCDRVAWEAVRYYQRKHTVSQATLF"
     gene            complement(12996..13211)
                     /locus_tag="PXD18_001197"
     CDS             complement(12996..13211)
                     /locus_tag="PXD18_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6301638.1"
                     /translation="MIENPEFGYTPSNLKMLRKHHNLTQTEVANILGVGQRIVMRWET
                     ELSSTAARSDMPYTKWAELLKNLQKNF"
     gene            complement(13230..13622)
                     /locus_tag="PXD18_001198"
     CDS             complement(13230..13622)
                     /locus_tag="PXD18_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301639.1"
                     /translation="MTDYQKLLNALLNDADEDCFAVYGLRATTDVHQVGDELGNSFVW
                     VDGEKTDEELDGICTMGIQNADEAGLLNAIKNLGRDACKKFDVEFKGFQSYCGQNFIL
                     VKGDSARGGEDKGESIIRNPIVVAVFNS"
     gene            complement(13748..14095)
                     /locus_tag="PXD18_001199"
     CDS             complement(13748..14095)
                     /locus_tag="PXD18_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301640.1"
                     /translation="MKELLLTTLCLLSLPAIAMTEKAEQETANALVSGDYQQLRNVAY
                     GMETGSFGHDHNPIAACALRRVILLVNSDKVDMTDFNNEAIACRKIEVTDNQQAWETA
                     FTIAKSISATKKK"
     gene            complement(14184..14609)
                     /locus_tag="PXD18_001200"
     CDS             complement(14184..14609)
                     /locus_tag="PXD18_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein GemA"
                     /protein_id="HDL6301641.1"
                     /translation="MQPQTRKQMIQKIHIGKNELKLDDNAYKMLLLEAVDKPSCSMMT
                     DSELMTVLQTMKAKGFVVKSKKYGKRPTASKTAPHRQGLINKIGALLYQSQKPWDYAH
                     AIAKRSFGIERVQWLTDDQLHKLVQILASYNHRHGMSVK"
     gene            complement(14593..15147)
                     /locus_tag="PXD18_001201"
     CDS             complement(14593..15147)
                     /locus_tag="PXD18_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301642.1"
                     /translation="MKLCKCPICHSDISFEALIEDDAGRELLNTIVNIGGNCGRAVVA
                     YLGLFKPQKNSLANSRALKIVQSLLELYPPSNVLEKALMDTVEQVRRNRRETGRCEPL
                     ANHNYLKKVYESVKPQFAVVRSEAKAVSSLEQQQRQADQKKHDAVMYVERMKQMGQLE
                     AVKNTESYQIWLKWQEEKQNATAN"
     gene            complement(15147..15317)
                     /locus_tag="PXD18_001202"
     CDS             complement(15147..15317)
                     /locus_tag="PXD18_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301643.1"
                     /translation="MEYQKIPEYRLCKKKSGEIVLQQLVICELTPATWHNPYPDSRTY
                     WVDLETIEEGTE"
     gene            complement(15388..15963)
                     /locus_tag="PXD18_001203"
     CDS             complement(15388..15963)
                     /locus_tag="PXD18_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5420 family protein"
                     /protein_id="HDL6301644.1"
                     /translation="MKFRFFKGDITQEPLKSIYADYQVSKEERKDKLNAILEKYPFND
                     GLISRSGWFHRIVIGIACKATNISQVLDVKGFKVGKFNDEFYLVKPDKRYEKGKELAE
                     DFKAINEIYEKHRDFSPYILKRLNMLYFVSDFSYSPTSGRSYLAVAGICENTLLVEMP
                     MPIDKNDEPFPEIAEGLVEIKESEFLAIQGK"
     gene            complement(15986..16168)
                     /locus_tag="PXD18_001204"
     CDS             complement(15986..16168)
                     /locus_tag="PXD18_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301645.1"
                     /translation="MTEQEKNELNSQLNEALMQIIQAQKYLKQSDFIRSGVYLGTVQD
                     LLPKVHLKLLTANRKH"
     gene            complement(16235..16381)
                     /locus_tag="PXD18_001205"
     CDS             complement(16235..16381)
                     /locus_tag="PXD18_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HDL6301646.1"
                     /translation="MKTEQKATEFDRYKHYAEKAAEAERKGNYAEAQDHWKVAKLSAK
                     KTAN"
     gene            complement(16492..16698)
                     /locus_tag="PXD18_001206"
     CDS             complement(16492..16698)
                     /locus_tag="PXD18_001206"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301647.1"
                     /translation="MFITFNVNYTDKPVVVNTDKVCSIENINGNVTVHFCDNKKLIMM
                     DFDDKEYASLLNHLHILNQLKRKS"
     gene            complement(16700..17317)
                     /locus_tag="PXD18_001207"
     CDS             complement(16700..17317)
                     /locus_tag="PXD18_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3164 family protein"
                     /protein_id="HDL6301648.1"
                     /translation="MSKVTIGNEIYWKDADGNLKPEALVKEIDKERDELVRQFVSKAQ
                     ALSKALGDFKQSVFDDVGAFVSLSADKYGVKIGGAKGNITLFTYDGEYKLQLAVQENI
                     RFDERIHAAKALIDECLHDWSEGAKPELKALIDNAFEVDKEGNLSTAKILSLRRVEID
                     DARWNQAMTAISDSVQVIGSKGYIRFYKRDENGKYQPISLDMAGV"
     gene            complement(17330..17521)
                     /locus_tag="PXD18_001208"
     CDS             complement(17330..17521)
                     /locus_tag="PXD18_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301649.1"
                     /translation="MKKRRMIYALYVGEENVADGTAEELAERLGVEAKTVRFMSSPAH
                     NKRVKYNGKAIRTVKVGLE"
     gene            complement(17524..17844)
                     /locus_tag="PXD18_001209"
     CDS             complement(17524..17844)
                     /locus_tag="PXD18_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301650.1"
                     /translation="MQKVYSEKAGEMMNPLNAFIHDSLVKLEIATLECEAMELEVERV
                     EFEAKSPPRLVLRDNCKTQDLVKNGLASLFGMKTKGGRRYDSYQMQVRGVKCVWESER
                     VTKV"
     gene            complement(17855..18736)
                     /locus_tag="PXD18_001210"
     CDS             complement(17855..18736)
                     /locus_tag="PXD18_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL6301651.1"
                     /translation="MKNQELRALMDSKGYQQKQVAQLLGVSVATVSLYLKGDYNGNVA
                     EMDRKVDELIERDKAKVVEAKYNAAFVPTLAARRGMEVMQFAHIEGEINVIFGAAGLG
                     KTQMLKEYERRNSSATLIEVDPSCTPKVLLRKIAEAVGANARGVNNELLESIVNKLKG
                     SERLLMIDEAELLSTRSLEFIRRIHDLTSVGVVLAGMPRLLVNLKGKNNELAQLYSRV
                     GFACDLGNALSEEDLGLLAESALGTNEFNAPLIKACHGNARRLSKLMRGVVRSSEINQ
                     TPISKDLVEQYSKMLIS"
     gene            complement(18740..20677)
                     /locus_tag="PXD18_001211"
     CDS             complement(18740..20677)
                     /locus_tag="PXD18_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6301652.1"
                     /translation="MKDWFSAKELAGISGLSKYPTNVTRQAKKEQWATRPLKGVKGGG
                     FEYHINSLPTEVQTEIRSRFMSAVVEAKPKKLPVVRAEVDVGNLTTKQREIADARMAL
                     VAYVLELEGSMSRIKAITYLCNLAKQGEMPPHLAELVAVANAKKTAKRTLSVRTLNGW
                     VVDYCKAENAEQRLKLLAPQVRQETKPEEIWWLSAFLGVYRQKNGICLTEAYREFEVE
                     WAYQYADNPLLLAQCPSLSQVQRAMNKLPLYVKEYGRRTGSHYKQLLSYVKRDWSVLR
                     ANDVWIGDGHSLKLKVAHPIHGKPFTPELTMIVDGAGRKVVGWSLALSENAFAVADAL
                     RHAISLHGVPAIYYSDNGGGEKNKFLDAEITGMLPRLGIRHETGIAGNPQGRGIIERL
                     NKTIGMTIARQFETGYATGADPETVRKTLYAVNSLANAKGELTPLQRKAQGKLPTWQQ
                     LIEVIQSVIDWYNNEHIHSEIRTTPARKYQQMLHAEDVVMLSPIELRDMSRPEFIRKP
                     DRGWVSWNNNHYFNLKLLDFDREEVVIGIDIHNAESVQVRTKDGRFICEAIWNGNTRE
                     AFPVAMVEQQRKERHKRRANLKQQQLDEINAELNPVLTIEQKNDFSLLATARKPKKEV
                     EPIFLTRAEKEDYEKKLAVGG"
     gene            complement(20692..20919)
                     /locus_tag="PXD18_001212"
     CDS             complement(20692..20919)
                     /locus_tag="PXD18_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6301653.1"
                     /translation="MNKKKRAQDMHRADIRAELMKKGITFSQLGIENGLSKTTVRNAL
                     DKPYKNGEEIIAKALGKTPAEIWPSRYPDVA"
BASE COUNT         5386 a         5255 c         3904 g         6429 t
ORIGIN      
        1 ccgcaccaag ccctgccgca atcattgcat ttgattcggt tgctccctta taccagccta
       61 caataattcg ctcactgtta aggcttgcgg ttaaggttgt gccggtggca taagtgccac
      121 gccagcccat tacaccaata gccggtttat cttcaatcgg ggcagaaacc gattctaaat
      181 ggctacgcaa ggcaagggca ttttcatcat ctgaaaacgg cgaaataatc acgttataat
      241 gcgtaccggc aacactcgcc aacgccggag caattagggc attacgctga ccgttatcaa
      301 acgcacgagc ctcaagggtt aaacctgttg ctgtattgcg tgttgcaagc gtgatttcat
      361 tgctgatttc gccttttgct tttgaggtca gtttaagtgt cgtttcactt tccacacttg
      421 ccaccacagg gctataactc gccgcattaa tcacattaac taaacgagcc acaatcgcct
      481 gtgcttcttc gccttttgcg gctgcaactt cgtaagctgt gccggcaatc gtaatacgca
      541 ccacaccggc ataagttact gtgccggtaa aactaacttg ccctgttgct gcaatacctg
      601 cctcgtggtc ttttaagccc accaccgtta aacggattag cggattattt tggattgctt
      661 ggcgaaccat taaatgagct accgagcctt taccaaataa attttccgcc tccacatcgc
      721 taaaaatctt ttgcggagca gtaaaagcag cctcaccgtt tagcattggt gcaacaatta
      781 gcacctcttg ctcattggtc ggcaaggtgg ttactgcatc tttgttgttg tattcggtca
      841 gcacacttgg tttgcgaata ctgttcggga ttttctcaaa ttcaattttt gacattattt
      901 gccccctgtt tctttagcgg atttggtttc tttgacgaca atcaaatcgc catccgcaat
      961 gcggcgttga tagtaaaggg tgttttcaac ctctactgcc tcttgttcaa tatagtgatg
     1021 cggtcggttt tctaccggca cacgcacccc tttagcggct ttcactttta acatctaatc
     1081 accatcctta aattctgttc taaatgccgt ttcggcattg ttattcgggt caaaaatccg
     1141 attattaaag cccgataaat cgccttgcgg ttcatctagc ttgccttgat actgcttaaa
     1201 gacttgctca ttcggctcaa ccccttcggg gaatctacca tcatcaagca cattgcactc
     1261 gttgtagctg atttcaaact caatagcata agcagagagt ttctctttct tcacttccgc
     1321 attattccaa atcgtgcgga ttcgcttagg ctggataggg tggactaaac cgtctaaagt
     1381 ctggttaatc aataaggttt tcaccgctcc cagcaactga ttaaccccca cctcacgact
     1441 tgttacccca cctaaacgcc cagcagtctg atttcgcatt gagcgagtaa taaccaacac
     1501 cacaaacaca tcagtggctt gatagcgttt acctcttact cccattgatt tcgcctcgaa
     1561 cgccgagcca ccataagaga caagacaagc aggcaaacgg agaacatcta acttctcatc
     1621 gttaatttcc ccggcatacc cagcaacggc atacaccatt ttgcctaagc ccagcgttaa
     1681 acgctcaatc aaagcacgct caattttgct aatcatcgct tatcacgccc ccaaatacgg
     1741 ttgcccccgt taaaaaactg cactgtattt tcgccagtag ccgattcttc ctcattggtt
     1801 tcatcaaccg ctaacgacac tacgccctta gagatgtttt ccagctcttt taagcaaagt
     1861 ttgtagcggt tttccacctc ttcggtcatc gttactaatg atttgctggt taaatgataa
     1921 cgagccaaat cacagcaaat acgctttaaa ttttgcggta cagtctttaa tggcagacgg
     1981 taacgcccac ttaaatagcc atcaatttgg ctggaagagt ccgctaaagc tacttcaaga
     2041 gtcgcttcat caaccacgcc taccatttca cggtcggtta gctcaatgga ttcctgttcg
     2101 ccaattcgca aaacgaaatc atcaaccaac gcatacatta cgcatcgccc tcaacaacag
     2161 gtacaaactc caaataaggg tcgttggcta aggtaataat ttgttcatca ctcaaggctt
     2221 tacgagcaat ttctaccgcc gtttctttat taaaacggta gccacaacgc ccataggtgg
     2281 cttgtgggtg gatagatttg agcttaactt caaaagcaat aggatttatc aaagcaccgt
     2341 catcaggctt agtttcactt tcaggcggtt taggttgttc atccgtttta tcttcaggct
     2401 gttcattcac cttatcttca agcggtgtgt tttcgtttgt gttcaaagct tcattgtcat
     2461 ttttctttgg ttttgccatt ttgctaccct ctcaaaatgg gcgtattgct acgcccaaca
     2521 ttaaacttat tcagcaataa atggattcac taccactttt aacacacctt ttaaggtgtt
     2581 ggttgtgccg tcaattaatt ctgcttcgag taatttgcgt gcagcaaact caagcgaagg
     2641 tggcacaagc aaagtggtcg ggcgaatatt taactgctta tcgccatcgc cttttaaggt
     2701 gcgcattgca gttaatactt tttcaagggt ttcactattt aactcactat cttcaacacg
     2761 gtgaattaac tgccagaaac caaaaccggc attaccacga gcacgcacac cccataaata
     2821 ttggtctttc ataaagacgt ggtctgactc acttggatca aacttcgttt caatttcagg
     2881 tgtagtacgt tcttgccaaa ttaacggctt aatggcttgg ctatcatcta gcacatagaa
     2941 cgcaggctta ccgctggcag agcctgtggt gatattactt tgtgttttac ttgtgccagt
     3001 tccatcaaca ttctgataaa cagggtgatc ggtatcaaag aagttctgcc cgtcatagca
     3061 aagggttgtc ttaccttttt tcaacaaact aaataccaaa tcatcaggta attcagccgc
     3121 actttgtgcc gcttgtttca ccattggggt aaataagccc acttggtcat cttcaatggc
     3181 agtacgaggc acagcaacgg ttgattcaaa taatttattc tcaatcgtca ttccttgtgc
     3241 ttgcatattt ttaatttgac ggtcgcccac ccactcttgc attttcggga attgtcccag
     3301 ccaagcatag gtattagtag cggtgctgga gcttaccttc attgcaaccg ttccccattg
     3361 tggttcaagc acttttaaac cagcactaaa ttctttacga aatgcagtat caagtgcttt
     3421 taataattca gattttttaa acattacttg gattcctctg ttttatattt ttcaatgtaa
     3481 gctgcttcgc ttaaaccaag cgattttgct gctgcaattt ccgcagcaga taacgccact
     3541 ttctccgtac ctttgttcgg gtcttcaccc cccgactgcg tacttgctaa agcggggtta
     3601 ggtgttaccg ttttcaaaaa gtcggataaa gccactaaat cttgcttacc gagcttttcc
     3661 gcccacgctt tttgagccgg caataaccga ccgtcagaaa gagcggtttg aattaacgca
     3721 tcacgctctt tatcgttgat ttgctgtttt aagccgttca gctcggtttg cactgcttgc
     3781 aagtcgctta acgccacaaa cttcgccggg tcagggtgat tcactttggc agagagtgca
     3841 accacttggc ttttctcttt tgccagctcg gtataaacat cacttaacgc caccgggctg
     3901 tcgcctttgg ctttctcaag tgcggtcagt ttttcggtaa tctgctcatc ggtcgcattt
     3961 gccgacaatg caaataattt aattaagagt tctttcattt ttggattttc ctcttcgggg
     4021 gttaaaaatt tggcaaattg gctagacatc gcaaccacct cttgcagatt atgcaaggca
     4081 gggcggttag ttaaggcggc attaagtacc ttaattacca ttccgctgcc gtctgtcaaa
     4141 aacagtggcg agagatagcg ataaacgccg tctttaatct cttgggtcgc ttgtggtgtc
     4201 cacttaacat ccgcaaacaa gccttcgccc gagatatatt ccgccttggt aatccaaccc
     4261 gcagcagggt tgcctttgcc gttctcggcg atgtacaggg tctgatgctc ataatcaatc
     4321 atcagatcaa tcgcagtgtt gttaatatca tcggctaacg catagccatt ctcgtcacct
     4381 acataccaac gtcctccgcg cccgtcttga gcctcaaacc aaccaaaagg gaaaagttga
     4441 atacgtccat ttgcctcttg gttgagttta aaactcaatg caatggggtt tagtttgaat
     4501 ttatgcttaa acacaaaaac acctcaaaac aaattaatga ggctaaagaa tagaagattg
     4561 agaaaaaaga gtaacgggga gcaacttcca caagttgcaa attttcagaa aaaaacaacc
     4621 gcttgtattc agcgaggaat gtaacccatt ttaaaacgct ttaaatccgt tttaaaaaat
     4681 tttaaaaaag ttggaatgat aaatcaccat aaaaaaaaca aaaacgccac agagagcgat
     4741 ttaggggcta tctgtggcga ttatcttatc gcttaatcca gcagtttttg ccagtaggct
     4801 tgcacatcgt ccaaaatatc ttgcctgtct tgcgaggtta attgtaaaaa aggtcgggct
     4861 tcaattttta ctttacgccc acgcccagcc ataccaccga attgatgaat agcagcataa
     4921 ggctcatttg tgccaacaat cgccgaatca ttattataat cagcagtaat gctgcccatt
     4981 aaattttccg tatcaactaa cggcgtgcct tgccgatgtt ttatacccag ccatttcggg
     5041 cgaccgccct catcaaaatt ggtcagtacc gccgattcca ttttgccggc aatattccgc
     5101 atcaagtctg ttttatttgc cgttttagca gcaatacggt taagcgtggc aataatttca
     5161 tcaatgccgt ggatttggat ttcaatcatt tttaaccttg caagttgatt tttaaaataa
     5221 acaggggtat attcctttta cggttattag aaaagcggtg ataatctccc tgccgcagcc
     5281 tatttgagat ggcaagtcct gctcaaatga ccgagagcgt gtgtaagtga ccgggagcct
     5341 tacctaataa ccgtattttt caacagcagc ttatccaatt ctttttgtcc aatctccctt
     5401 gttgatacca gaaataattc accaaactct tctaagtatt tcaccacaac aagaatacga
     5461 taatgctcaa agtttcgtat aaagctgaaa tttttgcctt cttgcaaaat atgattaggc
     5521 tgaaaaatta catcaggaat atttgcatac acatcaaacc caaaatcctg cccctcacgg
     5581 ctataaaact gcttaatcag tgtgtcatcc gaaagccata ccgtgccgac tttactgtcg
     5641 attaagcgtt gtgtttcctc acttaaccga ccagcagcaa atttaaagtt ttgattaagg
     5701 gcatttcgca ctttaaccat ctcatcaggc gagagttttt tcgccccatc tttggcaagt
     5761 gccacagcct cttctaactt gttaaacgcc tgcttaaatt caccaccgct catttctgct
     5821 ttggtaaatt ggtaagccag cttttcaggg tataaatcca aattcggctt ataggttaaa
     5881 cgccccacat tataatcaaa acctttatca gccaatcgca ccgtaccatc agccaattta
     5941 aagccaatgg tttcctcttg gttgcctaac ttatctttcg gtcgttttgc cttcactaaa
     6001 aacggctcgc tactgccgac ttcgtcaatc cctttacgct ttaaatcccg ctcacttaac
     6061 gcaatcacgg tacaacggca attaaagccg ttcggcggat aaaaagtcgc ccaaaacgga
     6121 tcgtcataac gataaatctt accctgtaat gcttggtgag cagggcgggt gcgttggtcg
     6181 cctaccgccg aatattgcca ataagggcga ttatccacat tatccatata ccgctgataa
     6241 cgagccgcag aataagcctg ttgcatattg gtacgataaa tcgtattcaa gcggcgaggc
     6301 gtgccgaaat gctcgccggt tttcgggtcg gcaagcagtt tgccatcaat gccacgacta
     6361 atcgtcgtgt ccatacaccc agcctttccg ttcaaattct gccgtaagcg ttttcttcca
     6421 ttcattaaag gatttcccct cacgccgtgc tttttccatc gactcataaa tatcacgggt
     6481 catttcaagg ctagtgagct tgctaatggt ggcggctcgc cccaatgcag aatcaaataa
     6541 ttcctgctta aacactttat tcgcaagcaa cttcttctgc cgtaaaaact caatcgcctg
     6601 cttaggctct agtccaatgg caaaattaac tttctgcatt cgcagcccct aataaatccg
     6661 ccaaaaataa cgcattcgct aaatagcggt cgtgttcttc actcactaaa tcagggtagg
     6721 ctgccgccaa tttttctgct gcctcatcat aagagctaca cgccattacc accgccaccg
     6781 cctttttcgt gatggggtca aattgggcgt taaaatccgg cacggaaaaa gcctcgtctg
     6841 ccaaatcatc taaggcatct tgctctttaa tgcccgtttt ggtttgggcc gacaaagcgt
     6901 gaaccttgcc cccacaaccg cattcgcaag cggtcatttt ttgcggaaaa tttgcggata
     6961 accccaccgc ttgtggcggg gcagaacgcc ctaacaccgc ttcattttct tgagcttcgg
     7021 gaataccgag tttatccatc gcccactgca ccggaatcgg cattccaata tccaccaatt
     7081 tcggcaagct ctcggcaaat aacgccaagt cggcaggctc tttggtatca aactcaaaac
     7141 tcggaatgcg ggttgggtcg atattgccaa aattaatttg cagaaacggc agaataattt
     7201 gttgggtaaa cgtctgcccc agctgtttca cgtccgacac caacaaatca cgccgcactt
     7261 cgttatgcac attgccgagt gcattggtag agcttttgcc gtctgcaccg ctggttaagg
     7321 tttgccccaa aatcaagcgg gcgatagact tctcacacca atccaccatt tgcaaaaacg
     7381 gattattgcc ggctgcaccg cctgcattag cggcgttatg caactcaata ctcatcgact
     7441 ccggcataat tccggcagcg ttgtgtccga tttccgctaa tgcacgttta agcgtttgtt
     7501 tttcgtttgg tgttgcccct gcaccgtatt taccaatgcg gataggcata ccatacagct
     7561 ccaaaaactc ggcaaagtcg tggatagagt agtgtttaaa catatacagc caagccagcg
     7621 agcggaataa attattgcgt gccgcctgtg tggagcggga tttatgcgta tgcaccaccc
     7681 agccaaattc tcgtaatggc tcaccttcgg tattttgtcg ggttttcagc aacagattgt
     7741 cgtgcttatc ccacttaaac cacgattgag gacggtggat aaaggcgttc ggataccaca
     7801 atttaccgtt aaacgcccat tcaatttcga gggcagcaaa accgtgtccc acagcgtcca
     7861 tacagtccat caccaaatct tcaaggttgc cgagctgata aaataactca tcaacctcat
     7921 cacgcagttt ttcttcctgc ggtgtggcat tgcgaggggc aacaatcgcc caatctacgc
     7981 ctaatgcggc acgcttacgg gtttggatat tggcaaaaat agagctgtcc cgctcctcaa
     8041 tatccataaa taattcgtgt tgagcggtaa tatcgccatt ctccgtatct tcaaaaatcg
     8101 ctttcatttt agcaggcgta ataaaattgc tcggatggtc ggagagtacc cgacctgtag
     8161 cggtaatttc ggctaaatcc gtctgcaatt cttgattttt aatcgggttt aaattcggtt
     8221 taatctgctt gttatgcttc tttttgctca taaattttcc ttttcagagc ttagttacgc
     8281 tcaatatagt ccccctcttt agcaaagagg ggagttacat taatgccgcc acttactgcg
     8341 atactcaccg tcaaaatcat ctacactctc ccactcaatc ggggcagagc tgctgagtgc
     8401 atttcgccat aacatttcca acgcatccgg accatcatcg tgatcggctt tcggaaaatg
     8461 gcgaagctgg ctttcaagcg tagattgcga gcggtgcaac aaaatcaaac cgttggcaat
     8521 atgcggttgc aagctctcaa tccgtaacat cttgtcactg ttcggcttgg ttgccgttgc
     8581 cggcaccggc ttaccacgct gggcagaacg cttgaccagt tccgtctgca aaaactcctg
     8641 aaattgcacc gtctccacaa accagcggtg acagttatat tgcgaatgca gtctaatcac
     8701 gtcctcaata attaaatccg gcaatcgttt tttgatttgt gcctcaacaa catagagctt
     8761 gccactctca cgatgatagc caccgaccaa aattgcagat gggtcacggc ttgccccagc
     8821 tttccccatt gaggggtcta acgccccgaa ataaatcagg tcatcaggca gttccgtcca
     8881 atactggata ctgttggcaa aaatcgcatc atcacccgag acagggtcat tttgatactc
     8941 ggagtcaaat gctgagtgcc catcactagc acggattttc atcaagtaga ggatagggcg
     9001 agctaaccaa gagactaacg ctcctttatc catttctgct ttatgctgtt gataaaagag
     9061 atcagacata gtgtcatcgt ccccttcttc cgagaggtat atattttccc attcgtccca
     9121 taacgccata ttgccgggaa agcgtaaaat ggctttaaaa cgaactcgcc gccaaccttt
     9181 tgtatttaaa atacggctaa gcacactgtc ataatgtaga attgtgccga catagataac
     9241 atcaaacttt tcacctgcag caccaagttt taaaactgct tttaaaaccc agttatgcaa
     9301 tttattacgc tgtgcaggtg tttctacgct ttcatcattc tcaatatcat caagtactac
     9361 taaatccgga cgataagctc cgtggcgacg accacgcaat ttttgcccag cccccacagc
     9421 ttcaactttt tgttttttag ccgtcataat gacacctgca cgccaaacct tgccttgtgc
     9481 aacctcgggg aaatcaattc ttaaacgagg gttagattca atttccactt taatagcttc
     9541 aagcatactg tatgcctgtt ctttggtgtc catcgcaata atgatgtatc tttttaaatc
     9601 acggactaaa caccacagcg ggaataattg cgtacaaatc gttgattttg cctcgccacg
     9661 aggggctgca atcgcttggc ggactgactt agaaagatca cttaccgaaa gcggtaaatt
     9721 ctcaaagaga taatgatgca actgtgattt atgttcagac cgcacatagt gtggaaaata
     9781 agcctgcaca aaatactcaa agccgtgaac agggtctaaa accttttgac ggcgttcgct
     9841 aatggcttgt ggtttatcgt cccaaccctc aaaactcgct tcgatatttt gttgtaactg
     9901 tcgccgtaat tcttccagtt ctttttcaaa ttctttgatt ttcataaatt acatacaagc
     9961 tgcgataagc aacaaccagc cccaaccgtc tgtaccgttg agcattagtt ttattgctcc
    10021 gaaaatacaa gcaagttgga caatccaacg gaaagagtaa tgcttatgca ctacagtttg
    10081 ttttttctta gccattactt aaactccttt ttgaattgca cttctagctc atctaacatt
    10141 tctaaaaagt caggcaataa atgcggtttc ttggttttga cgatattcgc catcatctca
    10201 atcgcacgca tagcggttgc cattgcactt gtttcaggca atagtttctt gctcgatgcc
    10261 gtcatcttcg caaacgaatc agccagagca gctaatgcct caaccttagc tgcggttggc
    10321 atttcggtgt tttcctcaag ctccgtcatc aacgtgcggt acttaattaa aaaaccggct
    10381 aacaagcctt gagcgatatt ctcaatacca ccgcttgcca tcgcttgcac atcacgagct
    10441 ttttcccagt tatcaccgtt cttttcagca gccgctttcc aacgccgtgc cgtgccgaat
    10501 gatacccctg cacgttctgc tgccatttcg aggcttaaac ggtcaaacac ataggcttgc
    10561 cgaaccgctt tttgtacttc aacatcgtgt gccatacgcc ctctacattc caaatttcag
    10621 gcgtaacaac tcaaaaccca cagcaacaat gccaccaccc aagccaccgg caactacagc
    10681 atcacggcgg tttttacgtg ccatttcatt cactaaacga ttagtcgctt ggatttcacg
    10741 gtgtaagcgt tcgatttctt cgttttgttt atccacctta tcgtttagct catttaatcc
    10801 acctaaaatc aggtctaatt tttccgaatc ggtttgcttt tgttttttac ggctcattac
    10861 ttatccgcct ttttatcaag tttttggttt acttctttga gcgagtctaa aatatcgtcc
    10921 agcttttcct taatccctct attcacttcg tgggcaagct ctttggattg atatttgctc
    10981 tccatttctg cttttagctc ttttaccgtt tgctcattgc ggttgatacg atcaaatatg
    11041 accttgccta caaacgccac taacggagca actacaaaag agatcagcat ctgaaacagt
    11101 ttttcatcaa tcataacgcc cccttttggc tcgcccgacc gggtgttgat taccttgtgc
    11161 caccgccgca cgcaccacgt tatgcaattc tgcaaggtca ggacggcggc gataaaaacg
    11221 ccattgttgc caacgctgtc tgagtttttt aattaacttc attctggcaa acttcctcat
    11281 aggtcagatt gtgtgcaagc acttggcgtt tcgtttccat tgtgtccgca cggctcgggt
    11341 aaatcagacc gaacgccgtg caacccgttg tcgtcacgga agtaaccgtg ttggtgcaac
    11401 tgctcatcaa tggcactagg ctgaatacgg cgagtttcac taacgtgttt ttgctgaatt
    11461 ttggcatttt taacctctgc atttttttgt tgaatttcga ccgcttgttg ctgcttttcc
    11521 gcctttaatg tagcggtaag tttccgctcc tgctttaatt gccagctttt ataaaaggca
    11581 taggctaaaa ttgtgcttac tacaccaacc acacctgcaa tttgttgagt aatcattctt
    11641 cagcctccct tgagcgttct ttttgtttta acgcacttac cacccctttt gtggctgggc
    11701 tacccaatac acaaatacca gcataagcaa accaccagtc ggaaataaac ggcttatcgt
    11761 aaaggtaggc gtgaattaaa atgcccgata acactaacca gctcataaac tgaataaagc
    11821 cagtggtgct ggctgtgccg tctttattgg taattaaatc aagtaaaaat tgcttcacga
    11881 ttattcctcc accgtgtctt tggcaaaata acgcaaatta cccgccattc ggttaatcca
    11941 acctctacca aaacggtcaa agtgtttgag tttggtgtaa aactcaaggc gttctgcctg
    12001 aaataacaag cccacatccg caaccgaata acgctcaatc gcagccaaag tcactttacc
    12061 gataatgccg tcatcagcca cacctaccgc tcgctgtaac attcggctag cattgcccga
    12121 accgtggttt acacacgcat ctaaaaactg aaaagccaac tcaggcggga actgctcaca
    12181 gttataacgt tgccaaaagg ctttgaggta aatagttttc gcatccgcac ggctcattgc
    12241 acgcatagag ccggtatagc cattcgcacg ggcagtatgg atagtgatac cccaattcgt
    12301 ttcgccaccg gggtctttcg ggtcgttcac ataaccgccc tcgtgtccga taagacggtc
    12361 aaatgcaaga ttaaagtcag caatagttgc cttgtttttg ataggttcag tcataaaaaa
    12421 agcctcttta aattcaatga tgatttaaag agactttaat gatttagagc aacggggagc
    12481 aggcgaaagg attccacact taaaacaagg tagcttgcga aacggtatgc ttacgctgat
    12541 aatatcgtac tgcctcccac gcaacacgat cacacacgct gtatttaggg caaatttgca
    12601 taatcgcaag cctgccactt agccctcctt gctcggttaa ttgacaataa tcggcataaa
    12661 tctgctgatt acgcaacatt cttaatgcgg tttcacaacg tggcaaatag acctcgcaag
    12721 ctcccatata agcctgtaat ttcactgcat catcttgccc taatacctct ttgagcttat
    12781 taaaatagag ttttccgtta gaaaattgga atgaaaagcc accaaaggct ttgattagct
    12841 tttcagttgc cggcaaacca atcacgccca caatttcttt caccgtttcc ggcaaataat
    12901 gttcgacact ttcaaattca gacataaaaa atccccttga ataatttcca cgaaagccat
    12961 tatccaaggg ggttattcaa atctgtaata cttacttaaa aatttttttg caaatttttt
    13021 aaaagctcag cccattttgt gtacggcata tctgatctag ctgcggttga tgacagttct
    13081 gtctcccacc gcattactat tctttgcccg acccctaata tgttagctac ctctgtttgt
    13141 gtgaggttat ggtgctttct tagcattttt aagttgcttg gtgtgtatcc aaactctggg
    13201 ttttcaatca ttcacctccc tccattaaac tagctattaa atacagcaac aacgataggg
    13261 tttctaataa tgctctcgcc tttatcttct ccgcctcttg cactatcgcc tttaactagg
    13321 ataaagtttt gcccacagta tgactggaaa cctttaaatt caacatcaaa ttttttgcaa
    13381 gcatcacgac ctagattttt aatagcattt aacaaacctg cttcatctgc attttggatt
    13441 cccattgtac aaatgccgtc taattcttca tctgtttttt caccatcgac ccaaacaaaa
    13501 gaatttccta attcatcgcc aacttgatgc acatctgtag ttgctcttaa accataaaca
    13561 gcgaagcagt cttcatcggc atcgtttagt aaagcattta aaagtttttg gtaatctgtc
    13621 attttaattt ctcctgtttg gctatgggtg cattatagta atataattac ctattgcaag
    13681 tgatttttcg tttttttctt aaattttttt atgtaaataa aaaagaccgc ttgaaagcgg
    13741 tctaaattta ttttttcttg gttgcagaaa tggattttgc aatggtaaag gcagtttccc
    13801 aagcctgttg attatctgta acctcaattt tacggcaagc aatcgcctcg ttgttaaagt
    13861 cagtcatatc aaccttgtcc gaattaacaa gcaaaataac acggcgtaaa gcacaagcag
    13921 caataggatt gtgatcgtgc ccaaacgaac cagtttccat tccgtaagct acatttctta
    13981 actgttgata atcaccactt acaagagcat ttgctgtttc ttgttcagct ttttctgtca
    14041 ttgctattgc tggtaacgac aataagcata aggttgttaa tagcagttct ttcattttaa
    14101 atacctttaa aagttgatta aaaaacacct aaaatctacc acaaaaaagc ccactattta
    14161 aagtgggcta tgcaataaat ttattattta acactcattc cgtgcctatg gttataactc
    14221 gccaatatct gcactaattt atgcaactga tcatctgtca gccattgcac ccgctcaata
    14281 ccaaacgagc gtttggcaat ggcgtgggcg taatcccacg gcttttggct ttgatacagc
    14341 aacgccccga ttttatttat caacccttgc cggtgagggg cggttttact tgctgttggg
    14401 cgtttaccgt attttttcga cttcaccaca aaccctttag ctttcattgt ttgcagtacg
    14461 gtcattaatt cgctatcggt catcattgag cagcttggtt tatccaccgc ctctaacaac
    14521 agcattttat aggcgttatc atccagtttt agctcatttt tgccgatatg gattttctgt
    14581 atcatctgct ttctagtttg cggttgcatt ttgcttttcc tcctgccatt tcagccaaat
    14641 ttgataactt tcggtgttct taacggcttc cagttgcccc atttgcttca ttcgttccac
    14701 atacatcacg gcatcgtgtt tcttttggtc tgcttgccgt tgctgttgct caaggctact
    14761 cactgctttc gcttcacttc ttactactgc aaattgtggc ttcacgcttt catatacttt
    14821 cttcaagtaa ttatgatttg ccagcggctc acatctgcca gtttcacgcc gattccgtct
    14881 tacttgttcc accgtatcca ttaaggcttt ttctaacaca ttagagggag ggtaaagctc
    14941 caataaactc tgcacaattt tcaaggctcg gctattggca aggctgtttt tctgtggctt
    15001 aaataaccct aaatacgcca ccaccgcacg cccacaattc ccaccgatat tgactatcgt
    15061 atttaacaac tcacgccctg catcatcttc aatcaacgcc tcaaacgaga tgtcggaatg
    15121 gcaaatcggg catttgcata gtttcatcat tctgttcctt cttctattgt ttcgagatca
    15181 acccaataag ttcgactatc agggtatggg ttatgccaag ttgctggagt tagctcgcaa
    15241 ataactaatt gttgtaacac aatctctccc gatttctttt tacataaccg atattcagga
    15301 attttttgat attccatttt atgctcctat aaaacacatt attcagccca cttaaatagg
    15361 ggttaaatgg gctgtaaatg ggttttatta cttcccctgt attgctaaaa actcactttc
    15421 tttaatctca accaatccct ctgcaatctc aggaaatggt tcatcatttt tatcaatagg
    15481 cattggcatt tcaaccagta aggtgttttc acaaatgcct gctacggcta aataacttct
    15541 acctgatgtt ggggaataac taaaatcact tacaaaataa agcatattca aacgttttaa
    15601 gatatagggc gaaaaatcac gatgtttctc ataaatttca ttaattgctt taaaatcttc
    15661 tgcaagttct ttcccttttt cgtaacgttt atcaggtttg acgaggtaaa actcatcatt
    15721 aaatttaccg accttgaacc ctttaacatc taaaacttgg ctaatattgg ttgctttaca
    15781 agcaatccct ataactattc tatgaaacca gcctgaccta ctaattaatc catcattgaa
    15841 aggatatttt tctaaaatag cattgagctt atccttgcgt tcttctttag atacttgata
    15901 atctgcataa atgcttttta gtggctcttg ggttatatcc cctttaaaaa atctaaattt
    15961 cattcttaac tccttactgg ggtggttaat gtttccgatt tgccgttaat aacttcaaat
    16021 gcacctttgg caacaaatcc tgcaccgtgc cgagataaac accactgcga ataaagtcac
    16081 tctgttttaa atatttttgt gcctgaataa tctgcattaa cgcctcgttt aattggctgt
    16141 taagttcgtt tttctcttgt tcggtcatca tctcctccta aaacggtttc ttatgcatac
    16201 gtttacaaaa taccgctcgt tgccccgccc agtctcagtt agcggtcttt tttgctgata
    16261 attttgcaac tttccaatgg tcttgggctt ctgcataatt gcctttacgt tcggcttccg
    16321 ctgctttctc ggcataatgt ttgtagcggt caaactcggt cgccttttgt tctgttttca
    16381 ttttttcctc ctgtggttaa aacactttat aaatgccctt ctatcttgtc cccctctttg
    16441 aaaaagaggg gctaggggag atttttaaag ggcattgaaa aggtttttta actaagactt
    16501 tctttttaac tgatttaaaa tatgcaaatg atttaataac gatgcatatt ctttatcatc
    16561 aaagtccatc attattaatt ttttgttatc acaaaagtgt actgttacat tcccgttaat
    16621 attttctatt gaacaaacct tgtctgtatt aaccacaaca ggtttatccg tataattaac
    16681 attaaaagta ataaacattc taaacccccg ccatatctaa actaatcggc tgatactttc
    16741 cgttttcatc acgtttataa aaacggatat aacctttact accgatcact tgtacgctat
    16801 ctgaaatcgc tgtcattgct tgattccatc ttgcatcatc aatctcaaca cggcggagag
    16861 agagaatttt tgctgtagat aaattacctt ccttatccac ctcaaacgca ttatcaatta
    16921 aggctttaag ctccggtttt gccccttccg accaatcgtg caagcattca tcaatcaagg
    16981 cttttgctgc gtgaatacgc tcatcaaagc gaatattctc ttgcactgct aactgcaact
    17041 tatattcacc gtcataagta aatagtgtga tattgccttt tgcaccgcca atttttactc
    17101 catatttgtc agccgatagg ctgacaaaag cccccacgtc atcaaatacg gattgtttaa
    17161 aatcacctaa cgctttgctt aacgcttgtg ctttgcttac aaattggcga actaattcat
    17221 cacgttcttt gtcgatttct tttactaatg cctccggctt taaattgcca tcagcatctt
    17281 tccagtaaat ttcattaccg attgttactt tactcataat acttcctctc tattccaacc
    17341 cgactttcac ggtgcggatt gctttaccgt tatatttcac tcttttgttg tgagcagggg
    17401 acgacataaa ccgcactgtt ttcgcctcca cccccaaccg ttctgctaac tcttccgccg
    17461 taccgtcagc cacattctct tcgccaacat acagggcata aatcattcgc cgttttttca
    17521 tttctacacc ttcgtaacac gttcagactc ccacacgcat ttcacccccc gcacctgcat
    17581 ttgatagctg tcataccgtc tgccgccttt ggttttcatt ccaaacaggc ttgccaagcc
    17641 gttcttgact aaatcctgtg ttttgcagtt atcccgtaag accaagcggg gtgggctttt
    17701 cgcttcaaac tccactcgtt caacttccaa ctccatcgcc tcacattcca aagtggcaat
    17761 ttctaacttc acaaggctgt cgtggataaa cgcatttaag gggttcatca tttcgcctgc
    17821 tttttcgctg taaacctttt gcataacttg ctccttagct aatcaacatc ttgctatatt
    17881 gctcaaccaa atctttacta attggtgttt ggttaatctc gctagaccgc accacgccac
    17941 gcattaactt acttaatcgg cgggcattgc cgtgacaagc tttaattagc ggggcattaa
    18001 attcatttgt acctaacgca ctttcggcta atagccccaa atcttcctcg ctcaaggcat
    18061 ttcccaaatc acaagcaaaa cctactcggc tataaagctg tgccagctca ttatttttac
    18121 ctttaagatt aaccaacaat ctcggcatac cggctaacac cacgcccacg ctggttaaat
    18181 cgtggattcg gcggataaac tccagcgagc gggtcgaaag taattcagct tcatcaatca
    18241 ttagcaacct ttcagagcct tttaacttgt tcacaatgct ttctaatagt tcgttattta
    18301 cccctctggc atttgccccc accgcctcgg caatcttgcg gagcaagact ttaggtgtgc
    18361 aactcggatc aacctcaatt aatgttgcag agctgtttct gcgttcgtat tctttgagca
    18421 tttgggtttt acctaagccg gctgccccaa aaatcacatt aatttcgcct tcaatatggg
    18481 caaactgcat tacctccatt cctctgcgtg ccgccaaagt tggcacaaaa gcagcgttat
    18541 atttcgcttc caccactttt gccttatcac gctcaatcag ctcgtctact ttgcgatcca
    18601 tttcagccac attgccgtta taatcgcctt tgagatacag actgactgtg gcaacggata
    18661 cacctaaaag ctgtgccact tgtttttgtt gatagccttt gctatccatt aaggctctaa
    18721 gttcttggtt tttcatcgtt tagcctccca ctgctaactt tttttcgtaa tcctcttttt
    18781 ctgctcgggt caaaaaaatc ggttctactt cttttttcgg ttttcttgcc gttgccagca
    18841 agctaaaatc gtttttctgc tcaatggtta aaaccgggtt taattccgca ttaatctcat
    18901 caagctgttg ctgtttaagg ttggctcggc gtttatggcg ttctttacgc tgctgttcta
    18961 ccatcgccac cgggaatgcc tctcgggtgt taccgttcca aattgcctcg caaataaacc
    19021 tgccgtcttt ggtacgcacc tgcacgctct cggcattgtg aatatcaatc ccgatcacca
    19081 cttcttcacg gtcaaaatcc agtaatttca agttaaaata gtggttgtta ttccaactta
    19141 cccaacctcg atccggctta cggataaatt ccggtcggct catatcccgc aactcaatag
    19201 ggcttaacat caccacatct tctgcgtgca acatctgctg atatttgcgt gccggcgtgg
    19261 tacggatttc cgagtgaata tgctcgttgt tgtaccagtc aatcaccgat tggattactt
    19321 caatcaactg ttgccacgtt ggcaatttgc cttgggcttt acgttgtagt ggggttaatt
    19381 cccctttggc atttgccagt gagttcaccg catacagggt tttgcgaacg gtttccggat
    19441 ctgcaccggt tgcatagccg gtttcaaact gtcgggcaat cgtcataccg atggttttat
    19501 ttaagcgttc aataatgcct cgcccctgcg gattgcccgc aatccctgtt tcgtgtcgga
    19561 taccgaggcg gggcaacatc cccgtgattt ccgcatccaa aaatttattc ttttcaccac
    19621 caccgttatc cgagtagtag attgccggca caccgtgtag gctaatggcg tggcgtagtg
    19681 catcagccac cgcaaaggcg ttctcactga gtgccagcga ccagcccacc acttttctac
    19741 cagcaccatc gacaatcatt gtcagctcag gggtaaacgg cttaccgtgt atcgggtggg
    19801 ctactttgag cttcagtgag tgaccgtcac caatccatac atcatttgct cgaagtaccg
    19861 accaatcccg cttcacatag ctcagtaact gcttgtaatg cgagccggtg cgtctgccgt
    19921 actctttcac atacaacggc aacttattca tcgctcgctg tacttggctt aggctggggc
    19981 attgtgccaa cagtagcggg ttgtctgcat actgatacgc ccattccacc tcaaattctc
    20041 ggtaggcttc ggtgaggcaa ataccgtttt tctgccgata tacgcctaaa aaagcactta
    20101 gccaccaaat ttcttccggc ttggtctcct gccgtacctg tggggcaagc agtttcaacc
    20161 gttgctcggc gttctctgcc ttgcagtaat ccaccaccca gccgtttaag gttcgcaccg
    20221 agagtgtgcg ttttgccgtc tttttagcat ttgctacggc aaccagctcc gccaagtgcg
    20281 gtggcatttc gccttgtttg gcaaggttgc aaaggtaggt tatcgcttta atccggctca
    20341 ttgagccttc caactccaac acatacgcca ccagtgccat tcgtgcatca gcaatttctc
    20401 gctgtttggt ggtcaggttt cccacatcca cctctgcacg cactaccggt aactttttcg
    20461 gcttggcttc caccaccgcc gacataaagc gggagcggat ttcggtttga acttcggtgg
    20521 gtaaagagtt aatgtgatat tcaaaaccac ctcctttaac ccctttcaat ggacgagttg
    20581 cccattgttc ttttttggct tgtctagtta catttgttgg gtattttgat aagccactaa
    20641 tacctgctaa ttcttttgca ctaaaccaat ctttcataac agctatcctt gttatgcaac
    20701 atcagggtaa cgactaggcc atatttcggc tggcgttttt cctaatgctt ttgcgataat
    20761 ttcttcaccg tttttataag gtttatcaag agcatttctt actgttgttt tggaaagccc
    20821 attctcaatc cctaactgag aaaatgttat tcctttcttc atcaattcag ctcgaatatc
    20881 agctctatgc atatcttgag ctcttttctt tttattcatt ttgtgagatc ctccacattt
    20941 agtttatttg ctacgcttta gcgtacttga ttaa
//
LOCUS       DANLXD010000040        20794 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.040, whole genome shotgun sequence.
ACCESSION   DANLXD010000040 DANLXD010000000
VERSION     DANLXD010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20794
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.040"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(39..9683)
                     /locus_tag="PXD18_001213"
     CDS             complement(39..9683)
                     /locus_tag="PXD18_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HDL6301654.1"
                     /translation="MNKHCFRTIFSKTLQRIVVVSELAKLAGKSESESMTSGAILQKI
                     CKIRPLAFSLFCALGFVTLSDNAMAETLIIQADSTAPKNQQPIILQTANGLPQINIQT
                     PNDKGLSHNKYSQFDVAEKGAILNNSRTNTATQQAGMVQGNPYLARGEAKVILNEVNS
                     SKPSVMKGYVEVAGKKAEVIIANPSGLHCDGCGIINADRATLTTGKPQINQGNLEGFV
                     VEKGKVTVAGKGLDNSRVDYTDILAREAKINAGVWSKKETKVITGKNTVKRSNSDNNL
                     QIIHTNQPLAGEEKPTVAIDVGELGGMYAGKIHLIGTEQGVGVRNAGHIGASADTLTI
                     DSQGRIVNSGTFNAQRQVQLNAQHGIDNQGKIENKQGNIQLNSKADIQNSGSIVARGG
                     NIQKKAETKIQQSGETVAKGNITYTARQIHADKNSLIAAGVDVTDTAQGEVRKLEAQS
                     VAGKTIQLTAPEKTTVQGKNIASGKINVAAAEIDANQSQNNAHTVEYSAKSGDIQANS
                     AQFSANQIKLTTPKWLSTEGSQLTAEVIEAQQANLNARGSVWKQTGEQDFRLKAESIH
                     TDSARFSVGGHFEIDGNRLTNNQGLLSSGKRLGLNLNDAVDSVDGKLVAKGELSIRAP
                     LLNNQQGLILSGEKQAITVNTLKNQSGVITSQTEQTLDITSELQNQGGRISASGVAIN
                     AQSLDNREQGEISSVKELALTVSQQVDNRHGVIQSVGNLTLNSTLLDNQGGVLKSATD
                     ITLNVPTVLNNRISENGSLIEAGGSLTMNSFEVENQGTLARQPQPIQGIIASQFVLNS
                     TKQLNNEKGGIYIGSSARFTLSDSLNNRNGEILSWGDLAIFGGKSLTMTNTEGKVSAN
                     NGLEITAKALSGDGDVQAGDIRLNLQENFDITKDINANRSMIIQTEGDILNRKKLAAN
                     DRLQLTANQITNAQNARISSADTRLTATSTVYNEGLINSRSDNDNAQTVIKAQEIHNI
                     GTGNIYGDKVALGAERILNQDKDGTSATIAARQSLGLAAKVIENNTLVYEANKKSGSL
                     IYSGGEIAIGRQLNEQDTVIGNAGQLHNRSSIIEAEGRIQLNADKVANVNSHYRSELE
                     TTDRQTVNEHFILPRDKHNRGGSDVYDNGHLPTINVNQLRKGYYRKTWSYWQKYDEAN
                     LPVITDISQLNATTVLAKPYAQSCANDESVDCTLLPAGNYKKDNPVWTWFNLTPPAED
                     APEMTPEIIQAMNEEDLANQHLSEAEQEKLQKEQGQGIAPVVPARPIEPVRGSTETEA
                     QYQKRLQTYQAELKAYEAAEAAYQRYVLLKPLIDWEAKYGANIQALDEAIAKHNKANL
                     SQEYPHFWNLWIKERMVKENITKASLPAQILAGGDLTYQSDEFINDKSWVIAGKALNP
                     IGRSRIANLDDADAVRQDWELGRRQFSFTEYHGGTRRRHSRYDENDGPLARLKEVHKD
                     MNIFVELENTSPTAYTDYVDAKAANAVKPEGNQVERGNLPDAPNPPTMAIERIPSPNA
                     AAFEVRSMTVDTRLPNQGLYRINPQADSHVLIETDPDFTDKKRWLSSDYMFNALRHDH
                     NNVHKRLGDGFYEQRLIREQINRLTGRQFLGDYTDFDSQYKALMDAGITFAQKFNLRL
                     GITLSPEQVASLTSDIVWFETQTVRLPSGETVSVLVPKVYALARKGDIDGKGSLISAD
                     ALTINSKEIVNQGTIAGRRLAQFNAERLENSGTLSGGVLAAKVSGDLENIGGKIEADK
                     AILLDIAGNFNHTSTTRTTQIDLDGFKRAETNLDRKALLHVKDENGLLQVQAGNITSA
                     GADIINDGQGQTYLSAKNQLNLTALQVGFDEKMGGGNHYRNEALNDVVISRVQGKGDV
                     VVSGKNLYSEGADLDAKARLALLAENDMVLGSATRSRDYEEYHKTKSGGALAKKTKTT
                     YDNISETEHKGTELTGEDILVKAGHDIQGESLLAVSRSGDIDIIGGNNVTLSSATNQL
                     SEQHIRETKRSGFLNGGEIGFTIGSQKTRQENSLEGAIQSTARNTLGSEGGNIRIQAG
                     NKASVSNVDVLISNEKTAVISGKNGVRVESGKDVINSTDNYEFSQSGLSIALSTPVTD
                     AVQSARQSVQKAKATQNEKLKGVYAVKAAEDAVIAAQNAQKVAETLGNLGNALTENHA
                     AAENPAVKISVSLGTQKQQRESRSQSVTHSKSTLNGGNIALISGAGKVALEGVDTRVK
                     DTLLLDGKLGIESKGVADTYQNNTKNKNHSASVGVFIGLDRDSFGIGFEAGVSGGKGK
                     ENIETETWQNNQLQAGKIVTNSANGKLMLDATNVKANHWEGEVQDFEARSRQDISKYK
                     SEYTEGSVHGTLAVGTTGVNGHVAYNGAKLNTAQVENQTAIDIGKSGMDVKVKKNAHF
                     EGAVMTSQAEKENNRFQAGTLTTGDIENHSELKTRSVAISGGTSGVNPMSALSLLGNK
                     NESERSTTKAAIGENIAITLTEDLNAETTLNHLNRDTQNANQKVTKYDISEVKETQEL
                     VKGIGEIAEKAYQIYTHSEREKVTEAKLELGKAQAQKASKEEIGKLEANLDRLQKEFD
                     KNYGTGSKTKRAVEAVTAALQGLAAKDVGQAAVGLASPYLNAEIKKYTEGDTQANLIA
                     HALLGAVEAAATGNNVLAGAAAGAGSEAAADFIVKTLYKGKSTQDLTEAEKQNVALLS
                     QLASGLASGLIGDSTQSAAVGADIGKRAVENNYLSNWQEQKRSQELKSCHGDARCENQ
                     VRLYWGLVDIGQDVSFVSGAVAGVPENLAESVEGLISMFSSPIETIVAMKELIAREDT
                     LSYIANMTKQEYLAKLDKMQVYYEQAGAVGSFNAGKEFGNMMTDVVTALTGAGALVKT
                     GVGTTAKIVTKSGKELAIPKTRSSASLGTCSFHGDMEVKTDKGYRQISSIKVGDKVLA
                     KNERTGITTYQKVQAHYSNPYDYTVYVEVADSKGKYHTIVSNKIHPFFTQVLSGRVPI
                     SSEGHSYNGEIAKAQWVDAQHLQKGYRLLAESGEWQTVTKVKIKQERLKAYNMTVEKD
                     HTYFIRGTNADNEGVWVHNDCWHALPNDAKQVKNIDGYKAYQFTDPKDGKVVTVVQKD
                     LNRFETPNHQAGVDPHFNRLSQQIDAETGRYLSTDNPVDGLYNRAYLRSETLQKIYAN
                     YEKLPNGNYRNKLTRQEIEQPIDIGHMYGWEHRRLSLAAKELNWSQKQFNDYVNARPE
                     NFRLENMSENRSHKNEMPGKHDIQRIKSDMEKFLKEGK"
     gene            complement(9735..11531)
                     /locus_tag="PXD18_001214"
                     /pseudo
     CDS             complement(9735..11531)
                     /locus_tag="PXD18_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250636.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
     gene            11665..12750
                     /gene="queA"
                     /locus_tag="PXD18_001215"
     CDS             11665..12750
                     /gene="queA"
                     /locus_tag="PXD18_001215"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HDL6301655.1"
                     /translation="MLVSDFHFNLPDELIARYPTAERSASRLLHLNGETGEFADQQFV
                     DLYDHINEGDLLIFNNTRVIPARLYGRKPSGGKVEALVERVLDEHRCLAHVKASKAPK
                     EGAELIFGEDKLGEGKGFTATMVARHDTLFELVFNEEQPLFELLQQAGHMPLPPYIDR
                     PDEDADQERYQTVYSKVLGAVAAPTAGLHFDNAMLEKLKAKGVDTAFVTLHVGAGTFQ
                     PVRVETIEDHKMHAEYAEVSQEVVDKILATKAKGKRVIAIGTTSVRSVESAAQAAEKD
                     GKLIAPFFSDTAIFLYPGKTFKVIDALVTNFHLPESTLIMLVSAFAGYRNTMNAYAHA
                     VETKYRFFSYGDAMFINKNPNALSDVP"
     gene            complement(12777..13315)
                     /locus_tag="PXD18_001216"
                     /pseudo
     CDS             complement(12777..13315)
                     /locus_tag="PXD18_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701733.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(13328..15610)
                     /locus_tag="PXD18_001217"
     CDS             complement(13328..15610)
                     /locus_tag="PXD18_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HDL6301656.1"
                     /translation="MTLDRFCIALILFHLPILWLPKAFLFVGIVIGTLVLILSVYLRS
                     KLTAVLGLLVCIGYIQIIQVAKNAEKTTASKTPVQFEISKILKQTDYQTAIATLNTGE
                     KIYLNWQSKQPLLLNQFYQAELALRPISARSNIGNFDRQRWYFANHINMTATVRKVET
                     LAKTDYSLRTNWLNKVKAETDALPTQGFLLALAFGERAWLKTEHWGQFQQTATAHLIA
                     ISGLHIGLAMLFGVYFAKGVQWLCLKSELTALQAVGFSLYFARIVSFITAFGYSYLAG
                     FAVPTARALLAIAFVLLCQVLRRHYTPWQYWGRIVALLILIDPLSLLSDSFWLSILAV
                     ASLILWYQYFPLSRFLNDEYRKKITKFNRLWLSLLHLQIGIWLIFSPVQLYFFEGISA
                     FALLANLIIVPLYSFLLVPLILFTLLTDNLFSTWLLADYLAQFSLWLLDPFSNAWFAL
                     SHWQQWQLLSLNLLVLVLLYCKLYRLSYKKWLSAVAVSLLFNLSFYLPKLFNQTQTEW
                     IMFDVGQGLAMAFIYQQNKAVIYDTGSSWQANDGSRNSMAKMEILPYLKRNGIEVEAI
                     FLSHDDNDHSGGVVELLQAYPKARLISSSKVTYHNINPEPCIAGTSWQFGEWQLLAIY
                     PSHIAERAKNQDSCVILAKNDRLKILLTGDSGVEQERQFAHQLGKIDFLQVGHHGSKS
                     STGETLLSITQPAFAVISAGRWNPWKLPNKQIIERLNRRHINVLNTVETGMIRVKFYP
                     SSIEIEQARGAFSPWYKQFY"
     gene            complement(15752..16966)
                     /gene="sstT"
                     /locus_tag="PXD18_001218"
     CDS             complement(15752..16966)
                     /gene="sstT"
                     /locus_tag="PXD18_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HDL6301657.1"
                     /translation="MSQSLSSKILGGNLVLRIAIGLVLGVLLAFINKEWATSVGVLGQ
                     FFVKSLRAIAPILVFVLVLAAIANKEVGSDSKLKPILVLYVLGTFFAALTAVVLSFMF
                     PTTLELTASPDGLTPPQGIGEILKTVIFNLVDNPLVALSNANFIGILAWSIGLGIAFR
                     HGSASSKAFLNDLANAVSFVVKVVIAFAPIGVFGLVAETVAINGIDAFEDYARLLVVL
                     VGAMLFVALVLNPLLVYWKIRRNPYPLTFTCLRESGVTAFFTRSSAANIPVNMNLAKR
                     LGVRDEIASVAIPLGASINMAGAAITVTVLTLAAAYTQGIQPDFATALLLSVVASICA
                     CGASGVAGGSLLLIPLACSLFNIPNDIAAQVIGVGFVIGVIQDSVETALNSSTDVLFT
                     AAVSYAEDQKSA"
     gene            17221..17583
                     /locus_tag="PXD18_001219"
     CDS             17221..17583
                     /locus_tag="PXD18_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDL6301658.1"
                     /translation="MKPTNKADFQRVINAAGYSMKGLKAAYINEAAFRQEIWCATILF
                     PLGLILGETNIEKALLVGTVLLVLVTELLNSAVESVVDRIGADFHELSGRAKDIGSAA
                     VFMAMVLLAITWILILFC"
     gene            17620..19263
                     /locus_tag="PXD18_001220"
     CDS             17620..19263
                     /locus_tag="PXD18_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HDL6301659.1"
                     /translation="MRLKKTLLSVALLSATSAMAYETGKTYRFTVLHTNDIHGHFWQS
                     DKGEYGLAAQKTLVDNIRKEVAEKGGSVLMLNAGDANTGVPESDMQNARPDIEGMNAI
                     GYDAMVLGNHEFDYPLQILSMQEKWAKFPFISANVINKKTDKPIVKPYVMLERGGLKI
                     AVIGLTTEDTAKLGNPDVTENAFFKNPIETAKNTLAEINQKEKPDVRIALTHMGYYFD
                     GKHGTNAPGDVTMARTLEKGAFDLIIGGHTHDTVCIDEKGQFKAKYTPGEECKPDFQN
                     GTWIVQAGEWGKFVGRADFEFKDGKATLVKYELIPVNLKKTIKKEDGTKEYRLYQPEI
                     KADEATYTLLKKYQDEGDKKLNIEVGRVKGLLDGKREHIRFQQTNLGRLIAQSQMERV
                     KADIGIMNSGGIRTSLEEGVITYKHILTVQPFGNMIATVDLKGQELLDTLTTIALKEV
                     DTGAYPQFAGISMVVDRTAKTISDVKIGGKPFDKEKTYKVSLPDYVAAGGDGYPLLKK
                     HPSYVNTGFIDAEMLKKFFEENKIIEADKYDPKNQIIFK"
     gene            complement(19470..20339)
                     /locus_tag="PXD18_001221"
     CDS             complement(19470..20339)
                     /locus_tag="PXD18_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDL6301660.1"
                     /translation="MSSRGKILNTISSLQNSLTKTEKKIAAAILSQPELLSQCSLSEV
                     AKQLDVGEATFIRFCRTLGFKGYTDFKLELAIELATQNQDNRVLLDTDVSESDTSKDI
                     AEKLKVSLDNVIEETINLLDFNVLEKVVEELRKAKRIFLFGVGSSGLTAEDAKHKLMR
                     IGLQTDAVTNNHFMYMQAALVKEGDLVIGISHSGYSEEIVKSLRFSRANKATTVAITH
                     NLRSPVTEEANYVLINGNRQGHMQGDSIGTKMSQLFVLDLIYTLLVKAEPENALKQKQ
                     KTLNVILEQRVKG"
     gene            complement(20349..>20794)
                     /locus_tag="PXD18_001222"
     CDS             complement(20349..>20794)
                     /locus_tag="PXD18_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HDL6301661.1"
                     /translation="RDDYLKSLPPVFARLCKKLKSLDLVNLELGWQELENGIRMNVMS
                     FETTPAEGKKAELHRKFIDIQLLIDGEEMIEYGLSQPDLSKYDEYRDEDDYQLTAEID
                     DKNNLILKPNMFAIFLPYEPHKPGNSVNGNKTLKKLVVKVPVELI"
BASE COUNT         5585 a         4721 c         4067 g         6421 t
ORIGIN      
        1 agggttcatc tttatatttt tcatataatt cattcatatt atttaccttc ttttaagaat
       61 ttttccatat cggatttgat tcgttgaata tcatgttttc ctggcatctc attcttatgg
      121 ctacgatttt cagacatatt ttctaatctg aaattctccg gtctcgcatt aacataatca
      181 ttaaattgtt tttgactcca atttaattct tttgccgcta atgataatcg gcgatgttcc
      241 cagccataca tatgacctat atcaataggc tgttcaattt cttgacgggt taatttattg
      301 cgataattac catttggcaa tttttcataa ttagcataaa ttttctgtaa cgtttccgag
      361 cgtaaataag ctcggttata tagcccatct accggattat ctgtcgataa atagcgtccc
      421 gtttcggcat caatttgctg agacaaacgg ttaaaatgtg gatctacccc ggcttgatgg
      481 tttggcgttt caaaacgatt gagatctttt tgaactactg tcaccacttt cccgtctttc
      541 gggtctgtga actgataagc tttatagcca tcaatatttt ttacctgttt ggcatcattc
      601 ggtaaagcgt gccaacaatc attatgcacc catacccctt cattatcggc atttgtacct
      661 ctaataaagt aagtatgatc tttctctacc gtcatattgt aggcttttaa tctttcctgt
      721 ttgattttta ccttagtgac agtctgccac tcaccacttt cagcaagtaa gcgatagcct
      781 ttttgcaaat gttgagcatc aacccactga gcttttgcta tctctccgtt gtaagaatgc
      841 ccctccgaag aaatcggcac tctgcccgat aatacttgcg taaagaacgg gtggattttg
      901 tttgacacaa tggtgtggta ttttcctttg ctgtctgcga cttctacata caccgtataa
      961 tcgtatggat tactgtaatg agcttggact ttctgatagg tggttatacc ggtgcgttca
     1021 tttttcgcca gcaccttatc gcccacttta atgctggaaa tctgtcgata acctttatca
     1081 gttttgactt ccatatcacc gtggaatgag caagtgccta aactagcgct cgatctggtc
     1141 ttaggaatcg caagttcttt acctgatttg gtgactattt tcgccgttgt ccctacacct
     1201 gttttaacaa gagcaccagc accggttaat gctgtcacca catcagtcat catattgcca
     1261 aactcttttc cggcattaaa agaacctaca gcccctgcct gttcatagta aacctgcatt
     1321 ttatcgagtt tagctaaata ctcctgttta gtcatattag caatatagga gagcgtatct
     1381 tctcttgcga tcaattcttt catcgccaca atagtttcta ttgggcttga gaacatggag
     1441 atcaatcctt caacgctctc agcgagattc tcaggaacac cagcaacggc gcctgataca
     1501 aaactaacat cttgcccaat atcaactaat ccccaatata atcgaacttg gttttcacag
     1561 cgggcatcac catggcagga ttttaattct tgtgagcgtt tctgctcctg ccagttcgag
     1621 aggtagttat tctccactgc ccttttccca atatccgccc caaccgctgc cgattgtgta
     1681 ctatccccta tcaaacctga agccagtccg cttgcaagct ggcttagcaa cgccacattc
     1741 tgtttctcgg cttcggttaa gtcttgcgtg gatttgccct tgtagagggt tttaactata
     1801 aagtccgctg ccgcttcgct ccctgcgcct gcagcagccc ctgccagtac attgttccct
     1861 gtcgcagccg cttccaccgc acccagtaag gcgtgggcaa tcaggttggc ttgggtatcc
     1921 ccttcggtgt actttttgat ttctgcattt aagtatggtg aggctaaacc cactgccgct
     1981 tgtcccacgt ctttcgccgc taaaccttgc aaggctgccg tcaccgcttc caccgctcgt
     2041 ttggttttac tgcccgtgcc gtagttttta tcaaactctt tttgcaagcg gtctaaattg
     2101 gcttctaatt taccaatctc ttccttgctc gctttttgag cttgtgcttt gcccaattcc
     2161 agcttcgctt ccgtcacttt ttcacgctca ctatgcgtgt aaatctgata agccttttct
     2221 gcaatctcgc ctatgccttt caccagctct tgtgtttctt tcacctcact gatatcgtat
     2281 ttcgtcactt tttgattggc gttttgcgta tctcggttga gatgattaag cgtagtttcc
     2341 gcatttaggt cttcggtgag ggtgatagcg atattttctc caatcgctgc ctttgttgtg
     2401 cttcgctcgc tttcgttttt attgcccagt aagctcagtg ccgacatcgg gttcacccca
     2461 cttgtccctc cgctaatcgc gacacttcgg gttttcaatt cactgtggtt ttcaatatcg
     2521 ccggtggtca gcgtgccggc ttggaagcgg ttgttttctt tctccgcttg gctagtcatt
     2581 accgctccct caaaatgggc gttctttttc actttaacgt ccattccact cttgcctatg
     2641 tcgattgcag tttggttttc cacctgagca gtgttcaact tcgctccatt atatgccaca
     2701 tgaccattta ctcctgttgt ccctaccgcc aatgtgccat gtacgctgcc ttctgtgtat
     2761 tcgcttttat atttgcttat atcttgtcga cttcttgcct caaaatcttg tacctcacct
     2821 tcccaatgat ttgctttgac attggttgca tccagcatga gtttaccatt tgcagaattt
     2881 gtaacaattt tacccgcttg cagttggttg ttctgccacg tttcagtttc gatattctcc
     2941 ttgcctttac ctccactcac tcctgcctca aaaccaatac caaaactatc tctatctaaa
     3001 ccgataaata cgcccacact cgcactgtga ttcttattct tagtgttgtt ttgataagta
     3061 tccgcaacac ctttggattc aatacccagc ttaccgtcaa gcagcagggt gtctttcact
     3121 cgggtatcca ccccttccag cgcaactttg cccgctcccg aaatcaaggc aatattgccg
     3181 ccgttcaggg tgcttttgct gtgggtcacg ctttgactac ggctttctct ttgctgtttt
     3241 tgcgtgccga gactgactga aatcttcacc gccggatttt ctgccgcagc atggttttct
     3301 gtgagtgcat tgccaagatt gcccagcgtt tctgccactt tctgagcatt ttgtgctgca
     3361 atcacggcat cctccgccgc ttttaccgca tatacccctt tgagtttctc gttttgtgtt
     3421 gccttcgctt tttgcaccga ttgccgtgcc gattgcaccg catccgttac cggtgtactc
     3481 aacgcaatgc ttaagcccga ctggctaaat tcataattat cggtgctgtt aataacatct
     3541 ttccctgatt caacccgtac cccgtttttg cctgaaatca cggcggtttt ttcgttggaa
     3601 atcagcacat cgacattgct cacgctcgct ttattgccgg cttgaatccg aatattgccc
     3661 ccttcactgc ccaatgtatt gcgtgccgtg ctttggattg ccccctctaa gctgttctct
     3721 tggcgtgttt tttggctacc gatagtaaag ccgatttcac caccgttcaa gaaaccgctg
     3781 cgttttgtct cacgaatatg ctgttctgaa agttggtttg ttgccgaact gagcgttaca
     3841 ttattaccgc cgataatatc aatatcgcca ctgcgtgaga cggcaagaag actttcacct
     3901 tgaatatcgt gaccggcttt cactaaaatg tcttcaccgg ttagttcagt gcctttgtgt
     3961 tcggtttcag aaatattgtc ataagtcgtt tttgttttct tcgctagcgc accaccactt
     4021 tttgttttgt gatactcttc ataatcgcga gaacgtgttg cgctacccaa caccatatca
     4081 ttttcagcca gtaacgctaa acgcgctttg gcatccaaat ccgctccttc actgtaaagg
     4141 tttttccctg aaaccaccac atcgcctttg ccttgcaccc gtgaaatgac cacatcattc
     4201 aaggcttcat tacgatagtg attgccaccg cccatttttt catcaaaacc aacctgtaaa
     4261 gcggtcaaat tcaactgatt ttttgcagat aagtaggtct gcccctgtcc gtcattgatg
     4321 atgtctgcgc ctgctgaggt gatgttgcct gcctgtactt gcagcagtcc attttcatct
     4381 ttaacgtgca gtagggcttt gcggtcaagg ttggtttcag cgcgtttgaa accgtctagg
     4441 tcaatctgtg tggttcgagt ggtggaggta tggttaaaat tgcccgcaat atccagcaaa
     4501 atcgctttat ccgcttcaat cttgccgccg atattctcta gatcaccgct cactttggca
     4561 gcaagcacgc caccactgag tgtgccacta ttctctaacc gttcggcatt aaactgtgct
     4621 aaacggcggc ctgctatcgt gccttggttt acaatctctt tactgttgat ggtaagcgca
     4681 tcggctgaaa tcaggctgcc tttgccgtca atatcacctt tgcgtgcaag ggcatacact
     4741 ttcggcacta ataccgatac cgtttcaccg cttggcaagc gaaccgtttg ggtttcaaac
     4801 caaacaatat cgctggtcaa gcttgccact tgctccggcg ataaggtaat gcctaaccga
     4861 agattgaatt tctgcgcaaa ggtgatgccg gcatccatca gggctttata ttggctatca
     4921 aaatccgtat agtcgcccaa aaattgtctg ccggttaagc ggttgatttg ctctcgaatt
     4981 aagcgctgtt cataaaaacc atcgcccaaa cgtttatgca cattgttatg gtcgtggcgt
     5041 agggcattga acatataatc actgcttaac cagcgttttt tatcggtgaa atccggatcg
     5101 gtttcgatca gaacatggct atccgcttga gggttaatgc gataaagccc ttggtttggc
     5161 aaacgggtat cgaccgtcat tgagcgaacc tcaaatgcgg ctgcattcgg gcttggtatg
     5221 cgttcaatcg ccattgttgg cggattaggg gcatcgggta gattaccccg ttcaacctga
     5281 ttgccttccg gcttcacggc atttgctgct ttagcgtcca cataatctgt ataagcggtc
     5341 ggtgaagtat tttccagctc gacaaaaata ttcatatcct tatggacttc ttttaaacga
     5401 gcgagaggac catcattttc atcgtagcgg gagtggcgac gtcttgtgcc tccgtggtac
     5461 tcagtaaaag agaattggcg ccttcccagt tcccaatctt ggcgaacagc atctgcatca
     5521 tcaaggttgg caattctact gcgaccaatc gggtttaacg ctttgcctgc aataacccaa
     5581 cttttatcgt tgataaattc atcgctttga taagtgagat cgccacctgc caagatctgt
     5641 gccggtaagc tggctttggt gatattctct tttaccatac gctctttaat ccacaaattc
     5701 cagaaatgcg ggtattcttg gcttaaattc gctttattgt gctttgcaat cgcttcatct
     5761 aatgcttgaa tattggcacc atattttgct tcccaatcaa ttaacggttt taatagcaca
     5821 taacgctgat aagccgcttc tgccgcttca taggctttca gttccgcttg atatgtttgt
     5881 agtcgttttt ggtattgggc ttccgtttcc gtagagcctc taacaggttc aatcggtctt
     5941 gccggaacca ccggtgcaat gccttgccct tgttccttct gtaatttttc ctgctctgcc
     6001 tcacttaaat gctgattcgc taaatcttct tcattcattg cttgaataat ttcaggcgtc
     6061 atttccggtg catcttcagc tggtggtgtt aaattaaacc acgtccatac tgggttatct
     6121 tttttataat tacctgcagg taatagagta caatctacac tttcatcatt cgcacagctt
     6181 tgagcatagg gttttgccaa tacggtcgtg gcattcagct ggctaatatc ggtaattacc
     6241 ggcaagtttg cttcatcata cttttgccaa tagctccacg ttttgcgata gtagcctttg
     6301 cggagttgat tcacattaat tgtcggcaaa tgcccgttat catatacatc acttccacct
     6361 cgattatgct tatctcttgg caaaataaaa tgttcgttca cagtttggcg atcagtggtc
     6421 tccaattccg aacgataatg actatttaca ttcgctacct tatccgcatt caactgaata
     6481 cgcccttcag cttcaataat actgctgcgg ttatgtagct gccctgcgtt gccaataacg
     6541 gtatcttgct catttaattg acgtccaatc gctatctctc ctccgctata tattaatgaa
     6601 ccgcttttct tattcgcttc ataaactagg gtattatttt caattacttt agccgctaaa
     6661 ccgagagatt gacgagcagc aatagtggca gaggtcccgt ctttatcttg atttagtatc
     6721 ctctccgcac ctaacgccac cttatcgcca taaatattcc ctgtgccgat attgtggatt
     6781 tcttgagctt taatcacagt ttgagcgtta tcgttgtccg agcggctatt gattaagcct
     6841 tcgttataga cggttgaagt tgcagtcaaa cgggtatctg ccgagcttat tcgggcattt
     6901 tgtgcattgg ttatttggtt tgccgtgagc tgcaagcggt catttgcggc taattttttg
     6961 cgattgagaa tatcgccctc agtctgaata atcatcgacc tattcgcatt gatatctttg
     7021 gtaatatcaa agttctcttg caaattcagg cgaatatcgc ctgcttgtac atcaccatca
     7081 ccggataacg ctttggcagt gatctccaaa ccattatttg cagaaacttt tccctcggta
     7141 ttcgtcattg tgagtgattt tccgccgaaa atagccagat cgccccaact taaaatttcc
     7201 ccattacggt tatttaagct gtcgctgagg gtaaatcgtg ctgatgagcc gatataaata
     7261 ccgccttttt cattattgag ctgttttgtg ctgttcagta caaactgcga tgcaataatc
     7321 ccctgtattg gctgaggttg gcgtgccaag gtaccttgat tttccacctc gaaactgttc
     7381 atcgtaagtg agccacctgc ttcaataagt gagccatttt ccgagatccg attatttaag
     7441 acagtcggta cattgagcgt gatatctgtg gccgatttca gtaccccacc ttggttatcc
     7501 aaaagcgtgc tatttagggt gagatttccc acactttgaa taacaccgtg ccgattatct
     7561 acttgttggg aaaccgtgag cgctaactct tttactgaac taatttctcc ctgctcacgg
     7621 ttatctaagg attgagcgtt aatcgcaaca ccgctggcgg aaattcgccc gccttgattt
     7681 tgcagttcgc tagttatatc aagggtttgc tccgtttgag aggtgatcac ccccgattga
     7741 ttttttaacg tattgaccgt aatcgcctgt ttttcgccac tcaaaatcag accttgctga
     7801 ttattcagca atggagcacg aatagataac tcgccttttg caaccaattt gccatcgact
     7861 gaatccacag catcatttaa atttagccct aaacgcttgc cactacttaa tagcccttgg
     7921 ttatttgtta aacgattacc gtcaatctca aaatgtccac ccactgaaaa gcgagccgag
     7981 tcagtatgga tactctctgc ttttaggcga aaatcctgct caccagtctg cttccaaacc
     8041 gagccacgag catttaaatt cgcttgttgg gcctcaatca cctctgcggt tagctggctt
     8101 ccttcagtgg aaagccattt tggggtggtg agcttgatct gatttgcact aaactgcgca
     8161 ctattcgcct gaatatcgcc cgattttgca ctgtattcaa cggtatgggc attattttgg
     8221 ctctgattgg catcaatctc agctgccgcc acgttaattt tccccgaagc gatatttttt
     8281 ccctgcacag tggttttttc tggggcagtg agttgaatag ttttccctgc cacagattga
     8341 gcttccagct tccgtacttc accttgtgca gtgtcggtta cgtccacccc agcggcaatc
     8401 agtgagtttt tgtcggcgtg aatttggcgg gcggtgtagg tgatattgcc ttttgcgacc
     8461 gtttcgccac tttgctggat tttagtttcg gcttttttct gaatattgcc acccctcgcc
     8521 acgatggaac cgctattttg aatatcggct ttcgagttaa gctgaatatt gccctgttta
     8581 ttttcaattt tgccttggtt gtcaatcccg tgttgggcat tgagttgcac ttgtctttga
     8641 gcgttgaacg tgccgctgtt tacaatccgc ccttgactgt caatggtgag cgtatcggca
     8701 cttgcaccga tatgcccagc gttacgcacg cccacgccct gttccgtacc aatcaggtgg
     8761 attttgccgg catacattcc gcccagctca cccacatcaa tcgcaactgt gggcttttct
     8821 tcccctgcaa gcggttgatt tgtatgaata atttgcaaat tgttgtccga atttgaccgc
     8881 ttgacggtgt ttttgccggt aatgacttta gtctcttttt tcgaccagac accggcgttg
     8941 attttcgctt ctcgggcgag gatatcggtg taatccactc ggctgttgtc cagccctttg
     9001 ccagcaaccg ttaccttgcc tttttccact acaaaacctt ctaaattgcc ttgatttatc
     9061 tgtggttttc cggtggtcag cgtggctcgg tcggcgttga taataccgca gccgtcacag
     9121 tgcaagccgc tcgggttggc gataatcact tccgcttttt tgccagccac ttccacataa
     9181 cctttcatta ccgaaggctt actggaattg acttcattta aaatcacctt cgcttcgcca
     9241 cgggcaagat acgggttgcc ttgcaccata ccggcttgtt gggtggcggt gttggtgcgg
     9301 ctgttgttga gaattgcccc cttctccgct acgtcaaatt ggctgtattt attgtgggaa
     9361 agccctttat cgttcggggt ttgaatattg atttgtggca gcccgttggc ggtttgcaaa
     9421 ataatcggtt gctgattttt cggggcagtg ctatcggctt gaataatcaa agtttccgcc
     9481 atagcgttgt ctgataaggt aacgaatccc aacgcacaga acaagctgaa cgcaagcggt
     9541 cgaattttgc aaattttttg taaaattgca ccgcttgtca tactttcact ttctgattta
     9601 cctgctaatt ttgctaattc agataccacc acaatacgtt gtaaggtctt gctgaaaata
     9661 gtgcgaaaac aatgcttatt cataataatt ccttaatagc acaatatact taatacaata
     9721 tgcccaatca ttcattaaaa attgtaacca atattaaaac cggcaacggt gtctgaggtt
     9781 ttaaaccctt ccggttttcg catcggtcta ccggcaaaca cgtcataact aaatccttta
     9841 actccacccc gaaacccaat ggctgttccc attaaatgat gtccgagctg attttccgtt
     9901 gcccaaccgg acactcgacc accatctacc gcccaataaa aagcgtggtt cggattaaat
     9961 tgccagctca actcattacg ccagttccag ccccgctcac cggaaagagt cagttcaccg
    10021 tcaaatccac gtatggtgta acgcccgcca atcgaaaaac ggtcttgcgg aaccagaggg
    10081 gttttattcc attgggcatt taggctactt tgccactgcc atggctgctt gccccaaaaa
    10141 aacggtttcg tcaggcttgc acttgccgtg atgattttag ggcgagaagt cccttcgcca
    10201 taatcttcct cgggagcaga taatgcccct cgtgctgccg tacctcgttt gaaattagcc
    10261 gaaagctcaa gcgtagcggt cgggaaatat tctttatgcg aaaaacccgc ttcccaacct
    10321 gccattcggc gtttttgtac ttcaatttct gagccgtcaa tatagttttg cgactggcgt
    10381 ggccaaagtg aaccggacaa gctcgtttta cgtttggcat cacgataaag caaataagaa
    10441 aaggttaatt tatcggtatc actttcaccg gcgtagagat agctcttgtc aaaggcacca
    10501 aatacttctt gatgataacg atgatgagtg tgtgaaaatg ctaactgcca atagccaaac
    10561 ggcacggaat agtaaagcgt gagattttta ctggcacgtc tgccgttatc atcacctttt
    10621 tgtttcatcg aatgggtaaa agaggtatag aacaggtcat ttgccgaaaa aatattatct
    10681 atagacagag tggcggaggt ttgtaatttg cctgtggatt tcgagccggc atcgtccagc
    10741 ccaagattta agcgaaatgg aaacgcttgc gaatagctga tttttaaatc actgtctccc
    10801 acctccgctt tttcgcttga gctgggtaaa atctcaatat ttgcctccgc cgtcggcacc
    10861 cgttttagat tttccagaga ctgctcaata tctcgcacat tcagaatatc gccttcggca
    10921 aaagtaaaac cggttaaggc gtgcagcttg gtaaaacgcg gtactttgcc gctatctacc
    10981 actaaagtat tgcgtatttt gcccggaatc acggttaaaa ctaattttcc gccacgtaaa
    11041 tcttgctccg cagtaaccac tcgtgtagtg acataacctt tgccaataat ttcattttgg
    11101 atttgcttca tcaacacagc taacccttca ccaccaaagc agtgaggtaa tgtcaaatga
    11161 aatgatttta ctgctttttc aaacgcccat tggaattggc tggtagtcag agaattgtca
    11221 ggagaatagt caatgagagt gatttgatga atggggtaac aaggcaattc gtgattggaa
    11281 agagtaagtg tatcattgat ttgtgtctcg agccgtacat cagctttcgg ctggaatttt
    11341 tctgcttgat tttgttggta ttgctgttag cgatgttgct gggcagcatc aatttgttgt
    11401 tgagttgcat caatgcgtgc ttgttgtaca aggcttgaag aatttgcttc agcaacaaaa
    11461 gaagcactta acaataccgt gcttaaaatc agattttgtg gggttttcat aagatcaaat
    11521 aagtaagaca ttcaacgttt ttagtctata aaaatttatg ttgttttgca aactccgttt
    11581 tatggagctt tatacatatc tgacgacttt ggttttttat gctattatct ccgccatttt
    11641 tatactatag agaatagaat aaccgtgtta gtttcagatt ttcatttcaa cttacccgat
    11701 gagctgattg ctcgctaccc gactgccgaa cgctctgcca gccgtttatt acacttaaat
    11761 ggcgaaacag gcgaatttgc cgatcaacaa tttgtggatt tatacgatca tatcaacgaa
    11821 ggcgatctat tgatcttcaa taacactcga gtgatcccgg ctcgccttta cggtcgaaaa
    11881 cctagtggcg gcaaagtaga ggcattagtg gaacgggtgc tagatgaaca ccgctgcttg
    11941 gctcacgtta aagcctcaaa agcaccgaaa gaaggggctg aattgatctt tggggaagat
    12001 aagctaggtg aaggcaaagg ctttacggcg acaatggtag ctcgccacga tactctgttt
    12061 gaattggtgt ttaacgaaga gcaaccgtta ttcgaattgc tacagcaagc tggtcatatg
    12121 cctcttccac cttatatcga ccgccccgat gaagatgctg accaagagcg ttatcaaacc
    12181 gtttatagca aagtgttagg tgcagttgcc gcccctaccg ccggtttgca ttttgacaat
    12241 gcaatgcttg aaaaactaaa agcaaaaggg gtggatactg ccttcgtaac attgcacgtt
    12301 ggtgccggca ctttccagcc ggtacgggta gaaaccattg aagatcataa aatgcacgcc
    12361 gaatatgccg aagtgagcca agaagtagtc gataaaattc tcgcaacgaa agccaaagga
    12421 aaaagagtga ttgcaattgg tacgacatca gtacgttcgg ttgaaagtgc cgcccaagcg
    12481 gctgaaaaag atgggaaatt gattgctccg ttcttttctg acaccgctat tttcctttac
    12541 ccgggaaaaa cctttaaagt cattgatgcg ttagtcacca atttccattt accggaatcc
    12601 acgctaatta tgttagtctc agcatttgcc ggctatagaa atacgatgaa tgcctacgcc
    12661 cacgcagtag aaactaaata ccgttttttc agctatggcg atgcgatgtt tatcaataaa
    12721 aacccaaatg cgttgagtga tgttccttaa tttatgaggg ttataaggga ataacattat
    12781 gaacaaaaac aatcttccaa ccattttaag ggattgtttt caatatattc aataatttgg
    12841 aagtacgatg tttcattacg aataatgtgt tcataataat tcctttgcca aatttcagaa
    12901 atatcggtat tttgacgaac ccatttagtt acgccaattt taaaaccacg cacaatagag
    12961 ccgattgttc gtgatgttcc ccgtaagggc gaaacatttt tcgcccttat acatggggca
    13021 aatgatgatt tgcccctaca gtttcgacga tttcaataat gccatgtaaa tgattaggca
    13081 taatcacaaa gctatgcaag cttacatttg gaaaatgatc gggtatatct tcccaacatt
    13141 gacgtacaat attccctatc ttattaagcc tcatttcatc atcaacaatc tcaccgagaa
    13201 aatggtgttt atttttacaa caaatagtaa tgaaatagaa tccttgtgat cggtaatcat
    13261 aatgctttag acgaattgaa cgcctcctat gaatctccgg ctgatatttc tgcatttttc
    13321 ttattcctta ataaaactgc ttataccaag gggaaaatgc cccccttgcc tgctcaattt
    13381 caatagaact tgggtaaaat tttactctta tcattcccgt ttctacggta tttaatacat
    13441 taatatgtct tctgtttaat ctctcaataa tctgtttatt cggtaatttc catgggttcc
    13501 atcttccagc agaaatcact gcaaatgctg gctgggtaat cgataataaa gtttcgccag
    13561 tgctgctttt gctaccgtga tgtccaacct gtagaaaatc aattttgccg agctgatggg
    13621 caaattggcg ttcttgttcc acgccagaat cccctgtcag taatatcttc aagcggtcgt
    13681 ttttggctaa aataacgcaa gagtcttggt ttttagctcg ttctgcaatg tgtgacgggt
    13741 aaattgccaa taattgccat tcgccaaatt gccacgatgt tccggcaata caaggctcgg
    13801 gatttatatt gtgatacgtc accttgcttg aactaattaa ccttgctttt gggtatgctt
    13861 gcaataactc cactacccca cctgaatgat cattatcatc gtgacttaga aaaatcgcct
    13921 ctacctcaat gccatttcgc tttaaatacg gcaagatttc catttttgcc attgaattgc
    13981 gactaccatc atttgcttgc caactggagc cggtatcgta aattaccgct ttattttgtt
    14041 gataaatgaa cgccattgcc agcccttgcc caacatcaaa cataatccat tctgtttggg
    14101 tttgattaaa gagcttaggg agataaaaac tcagattgaa caatagggat accgctactg
    14161 cacttaacca ctttttataa gatagccgat ataatttgca atacagcaat actaaaacca
    14221 ataaattcag tgaaagtaac tgccactgtt gccaatggct taatgcaaac cacgcattag
    14281 aaaatggatc taacagccat aggctaaatt gagcaagata gtccgccaac agccacgttg
    14341 aaaacagatt gtcggtcaag agcgtaaata aaataagcgg tacaagcaaa aagctataca
    14401 acggcacaat aatcaggttg gcaagcagtg caaaagcaga gatgccctca aaaaagtaga
    14461 gttgaaccgg tgagaaaatc agccaaatgc cgatttgtaa gtgcaaaagc gataaccaca
    14521 agcggttaaa ttttgtgatt tttttacgat attcatcgtt taaaaatcgg ctaagaggaa
    14581 aatattgata ccataaaatt aaacttgcta ccgctaaaat tgagagccaa aaactatcag
    14641 aaagcaggct caatgggtca attaaaatca gtaacgccac tattctcccc caatattgcc
    14701 aaggggtata gtgtcgccgc agaacttggc aaagcaagac aaacgcaatc gccagcaacg
    14761 ctctggcggt cggcacggca aaaccggcta aatagctgta accaaatgcg gtgatgaagc
    14821 taactattct tgcaaaataa agtgaaaatc cgaccgcttg taatgcggta agctcgcttt
    14881 tcaagcaaag ccattgcacg cctttggcaa agtaaacacc aaacaacatt gccagcccga
    14941 tatgcaagcc tgaaatggca attagatggg cagtagcggt ttgttggaat tgcccccagt
    15001 gttctgtttt cagccacgcc ctttcaccaa aagccagagc caataaaaag ccttgcgtag
    15061 gcaaagcgtc cgtttcagct ttcactttat tcagccaatt tgttcgcaag ctataatcag
    15121 ttttggctaa tgtttccacc ttgcgaaccg ttgctgtcat attgatatga ttggcaaaat
    15181 accaacgctg tcggtcaaaa ttaccgatat tgctacgagc tgaaatagga cgaagagcca
    15241 gttcggcttg atagaattga ttaagtaaca acggctgttt cgattgccag ttcaagtaga
    15301 tcttctcgcc tgtatttagt gtcgcaatcg ctgtttgata atcggtttgt tttaagattt
    15361 tactgatttc aaattgaaca ggcgttttac tagcagtcgt tttttccgca ttttttgcaa
    15421 cttgaatgat ctgaatatag ccaatacaaa ccaataagcc gagtacagcc gttaattttg
    15481 agcgtagata aacactcaat atcagcacta aggttcctat tactataccc acaaatagaa
    15541 acgctttagg caaccataaa ataggcagat gaaatagaat cagggcaata caaaaacggt
    15601 ctaaagtcat aattcggctt actttttaaa gctgagtatg ccgtttgtgc ttaatatttt
    15661 cagaataaat tttcagattt tcgacacagt tcgcaaaaat acttgaaaaa ataaaggcag
    15721 actttttagc ctgccttata aagaagagat attatgctga tttttgatct tcagcgtaac
    15781 ttactgctgc agtgaataat acgtctgttg atgaatttaa tgcggtttca accgagtctt
    15841 gaatcacacc aatcacaaaa cccaccccaa ttacttgagc agcaatatcg tttggaatat
    15901 taaataaact acaggctaat ggaatcaata ataatgaacc gcctgccaca cctgatgcgc
    15961 cacaagcaca gattgatgca actacgctta atagtagtgc tgttgcgaaa tcaggttgaa
    16021 taccttgtgt ataagctgcc gctagggtta atacggttac agtaatcgct gcacctgcca
    16081 tattaatact tgcacctaat ggaatagcta cagaagcgat ctcatcacga acgcccaaac
    16141 gcttggctaa attcatattc accggaatgt tggctgctga actgcgggta aagaatgccg
    16201 ttacaccact ctctcgtaaa caggtaaatg taagtgggta tgggttgcgg cgaattttcc
    16261 aatacactaa taatggattt agtactaatg ccacaaataa cattgcgcca actaagacta
    16321 ctaataaacg tgcgtaatct tcaaacgcat caataccatt gatggcaaca gtttcagcta
    16381 ctaaaccaaa taccccaata ggcgcaaatg caatcacaac tttcacaaca aacgaaactg
    16441 cgttagctaa atcatttaag aatgcttttg aacttgccga accatggcgg aatgcaatcc
    16501 ctaaaccgat agaccacgca agaataccga taaagtttgc attacttaat gcgactaatg
    16561 gattatcaac taagttaaaa ataacggttt ttagaatttc accaatgcct tgtggcgggg
    16621 ttaaaccgtc tgggcttgca gtaagctcta atgtagttgg gaacataaag cttaaaacaa
    16681 cagccgttaa tgccgcaaaa aatgtaccta atacataaag caccagaatc ggctttaatt
    16741 tgctatctga accaacttct ttatttgcaa tcgcagccaa aactaataca aatactaaaa
    16801 taggcgcaat ggcacgtagt gatttcacaa aaaattgacc taatacacca acgctggtag
    16861 cccattcttt attaataaat gccagcaata cccctagcac taaaccaatg gcgatacgta
    16921 atactaaatt accgccaaga atttttgatg ataatgattg actcataacc cttcacttct
    16981 gtaagacaac aaaaaataag gataaataaa atttatccgc ctgaaaaaat aggtttataa
    17041 gattagcgga aaataaacaa atatggaata aacaagcggt ttatttttca gattttttta
    17101 caaaaaagtg aagtttttta cattccatgg ctatcatatt attttttcct taggttcttt
    17161 gaacatcacc attctttcag tacaatagtt ctctaaactc ttttatttat tttatttact
    17221 atgaaaccaa ccaataaagc agattttcaa cgtgtgatca atgcagctgg ctactctatg
    17281 aaggggttaa aagccgctta tattaatgaa gccgcctttc gccaagaaat ttggtgcgct
    17341 actattttat tccctctagg gcttattcta ggcgaaacca atattgaaaa agcattatta
    17401 gtaggcacag ttttacttgt tttagttaca gaactactca atagtgcggt tgaatctgtt
    17461 gttgaccgca ttggggctga tttccacgag ctttctggta gagctaaaga tattggctct
    17521 gcagctgtat ttatggcgat ggttttactc gctataactt ggatattaat tttgttttgt
    17581 taactctatt tttcaaccaa cactcttact gaggtattta tgcgcttaaa aaaaacatta
    17641 ctttcggtag cactacttag tgcaacatca gcaatggcct acgagacagg taaaacatat
    17701 cgttttacgg ttttacatac taacgatata cacggtcact tttggcaaag tgataaaggc
    17761 gaatacggtc tcgctgctca aaaaacattg gttgataata ttcgcaaaga ggtcgcagaa
    17821 aaaggtggtt cggtattaat gctgaatgca ggtgatgcga atacaggcgt gccggagtca
    17881 gatatgcaaa atgcacgtcc tgatattgaa ggaatgaatg cgattggtta cgatgcaatg
    17941 gttctaggta atcacgaatt tgattaccca ctgcaaattc tctctatgca agaaaaatgg
    18001 gctaaattcc cctttatttc ggccaatgtc attaataaaa aaacggataa acccattgta
    18061 aaaccttacg tgatgttaga acgaggcgga ctaaaaattg ctgttatcgg attaacaacc
    18121 gaagataccg caaaattagg taatccagat gtaacggaaa atgccttttt caaaaaccct
    18181 attgaaacag caaaaaacac attagctgaa attaatcaaa aagaaaaacc cgacgtacgt
    18241 atcgctttaa cccatatggg ttactatttt gacggtaaac atggtactaa tgcaccaggt
    18301 gatgtaacaa tggcccgtac cttagaaaaa ggagcgttcg atttaatcat tggcggtcat
    18361 acccacgata ctgtttgtat tgatgaaaaa ggtcaattca aagccaaata tacgccgggt
    18421 gaggaatgta aaccagactt ccaaaacggt acttggattg tgcaagccgg cgaatggggc
    18481 aaatttgttg gacgggctga ttttgagttt aaagatggaa aagctacctt ggtaaaatat
    18541 gaattaattc cggtcaactt aaaaaaaacc attaaaaaag aagacggtac taaagaatac
    18601 cgactttacc agcctgaaat caaagccgat gaagcaacct ataccttatt gaaaaaatat
    18661 caagatgagg gcgataaaaa gcttaatatt gaagttggtc gtgtgaaagg gttattagac
    18721 ggcaaacgtg agcatattcg cttccaacaa accaatctcg gtcgtttaat tgcacaatcg
    18781 caaatggaaa gggtaaaagc cgatatcggg attatgaact ccggcggtat tcgtacctcc
    18841 cttgaagaag gtgtaataac ttataaacat attctgactg ttcaaccttt cggtaatatg
    18901 attgcaacgg tggatttaaa aggacaagaa ttgttagata ccctcaccac tattgctctg
    18961 aaagaagttg atactggcgc ttatcctcaa tttgccggca tttcaatggt agtcgaccgt
    19021 acagcaaaaa ctatttctga tgttaaaatc ggtggcaaac cttttgataa agagaaaact
    19081 tataaagttt ctctgcctga ctatgttgcg gctggtggcg atggctaccc attactgaaa
    19141 aaacacccta gctatgtcaa tacaggcttt attgatgccg aaatgctgaa aaaattcttc
    19201 gaagaaaata aaattattga ggcagataaa tacgatccaa aaaaccagat cattttcaaa
    19261 tagagctata gaaaatgaaa ctcactctgg cagtctctgc tcaaaagagc tgtggctgcc
    19321 tgtagattgt tttcttactt tcaagtgtta taggaaatcg ataaaaaatc cctaccaaat
    19381 taattcatca ccatatgatg aaaattaaaa aacctctggc aatactttgc caaaagtctt
    19441 tgacttttat agggtaatat cactgcttat tagcctttaa cacgttgttc caaaatcaca
    19501 ttcagtgttt tttgtttctg tttcaacgca ttttcgggtt cggctttaac tagtaaggta
    19561 taaattaaat caagaacgaa aagttgtgac attttagtac cgatagaatc tccttgcata
    19621 tgcccctgtc gattaccatt aattaacaca taattagcct cttccgtgac gggggaacgt
    19681 aaattgtgtg taatcgcaac cgttgtcgct ttatttgcac gagaaaaacg tagtgatttc
    19741 acaatttctt cagaatagcc tgaatgacta atccctataa ctaaatcccc ctctttcacc
    19801 aatgccgcct gcatatacat aaaatgatta tttgtgactg catcggtttg tagcccaata
    19861 cgcattaatt tatgttttgc atcttctgcg gttaacccag aagaacccac tccaaataaa
    19921 aagatccgtt ttgccttacg taattcttca acaacttttt ccaacacgtt aaagtcaagc
    19981 aaattaatag tctcttcaat aacgttatct aaactcactt tgagcttctc agcaatatct
    20041 ttcgatgtat ccgattctga aacatccgta tcaagcaata ctctattatc ttgattttgc
    20101 gtagccaact ctattgcaag ctctaattta aagtcggtat aacctttaaa acctaatgta
    20161 cgacaaaaac gaataaaagt tgcttcacca acatctaatt gtttggccac ttcagataat
    20221 gaacattggc taagtaattc cggctgagat aaaatagcag cagctatttt cttctctgtt
    20281 ttggttaaac tattttgtag cgagctaatt gtattaagaa tttttccccg actagacata
    20341 gtagcctcct aaatcaattc aacaggtact ttcaccacca gttttttcaa tgttttgttg
    20401 ccattcaccg aatttccagg cttatgtggt tcataaggga ggaaaatagc gaacatattt
    20461 ggcttgagga tcaagttatt tttatcatca atctcagctg ttaattggta gtcatcttca
    20521 tctcgatatt catcatactt agataaatct ggctggctta acccgtattc aatcatttct
    20581 tcgccgtcta tcaataattg aatatcgata aattttcggt gtaactctgc ttttttcccc
    20641 tcagctggcg tagtttcaaa tgacattaca ttcatgcgaa taccattttc taattcttgc
    20701 cagcctaatt ccaaattaac taaatctaaa ctttttaatt ttttacaaag gcgagcgaat
    20761 actggtggaa gagattttaa ataatcatct cttg
//
LOCUS       DANLXD010000041        20129 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.041, whole genome shotgun sequence.
ACCESSION   DANLXD010000041 DANLXD010000000
VERSION     DANLXD010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20129)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20129)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20129
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.041"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            29..502
                     /gene="nrdG"
                     /locus_tag="PXD18_001223"
     CDS             29..502
                     /gene="nrdG"
                     /locus_tag="PXD18_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="HDL6301662.1"
                     /translation="MENLRFSSEQIVWQEVPNETSLAFLITGCPLGCKGCHSADSWKA
                     CLGKELSSEYLSERLKRYQGLISCVLFMGGEWEAEKLLPLLQLAKNQGLNTCLYSGLE
                     QHEIAETLLHELTYLKTGRWIAERGGLESLTTNQRFTDLRNNQNLNHLFIRGASI"
     gene            499..2280
                     /gene="nrdD"
                     /locus_tag="PXD18_001224"
     CDS             499..2280
                     /gene="nrdD"
                     /locus_tag="PXD18_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HDL6301663.1"
                     /translation="MIRLQPTQLDGKLHFINQYIQAKNAADGSKMDANANVTQKNIAT
                     MEQELMKDFFVQINRAKVSEKIAKIFGKETACEYLRQIEAHEIYVHDETSLKPYCVSV
                     TMYPFLRDGLTKLGGESKAPKHLASFCGSFINFVFAVSSQFAGAVATVEFLTYFDYFA
                     RKDYGDNYLQTHRSDIENHLQQVVYSINQPAAARGYQSVFWNISVYDKFYFEAMFSRF
                     VFPDFEKPNWETTSKLQLFFMQWFNKERSKAILTFPVVTAAMLTEKGKCKDDEFANQM
                     AKELSQGNSFFIYQSDNPDSLASCCRLRNEISDHSFSYSLGAGGVATGSINVITINMN
                     RLVQDNRDLSEEVSKIHKYQYAYRKLMEEYLAAGMLPVYDAGFISLHKQFLTIGINGM
                     AEAAESQGLTVGYNPDYIDFVQSRLKIIFQANQAAGEKYGVKFNTEFVPAENLGVKNA
                     KWDKEDGYFVPRDCYNSYFYVVEDEEINALDKFLLHGRELIEWLDGGSALHLNLDEAL
                     TQTGYRSLLDTAAKTGCNYFCINVKITICNECSHIDKRTLHSCSKCGSDNIDYGTRVI
                     GYLKRVSAFSSARQKEHSLRFYHREAA"
     regulatory      2337..2433
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            2490..3308
                     /gene="thiM"
                     /locus_tag="PXD18_001225"
     CDS             2490..3308
                     /gene="thiM"
                     /locus_tag="PXD18_001225"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HDL6301664.1"
                     /translation="MTTSLPYHSHYLQKIRQNRPLVHNITNIVAANFSANGLLALGAS
                     PIMAAAIEEMESVPALSNAVVINIGTLIGKEVEAMELAGKTANRLGIPLILDPVGVGA
                     TPFRRQTVETLVDQIHFTAIRGNAGELATLAGVEWQAKGVDAGEGSHNVVEIAQQIAK
                     RYQTLVAISGETDVVSSGSHTALLHNGSPMFPKITASGCLLSAVCGAFLAVADKEHYF
                     NALIEACAAYAVAGEVAAQALKPTQYGQFAVNLLDTLGALTPETVEQYVRVEYV"
     gene            3301..4614
                     /locus_tag="PXD18_001226"
     CDS             3301..4614
                     /locus_tag="PXD18_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6301665.1"
                     /translation="MSKTHSNPTKVAVASMVGTAIEYFDNYIYTMAAVLVFNVQFFNS
                     DDPVSNQLMSLSVLALAFFTRPMGSILFGHFGDKYGRKQTLIASLLLMGLSTVAIGLL
                     PNYAAIGIWATVLLCLCRIGQGLGLGGEWGGAALVATEHAPKHKRAFFGIFPQMGAPI
                     GLLLANGAFYLVNLIYGEQTFLDWAWRIPFVASIVMIAIGLYIRIKISESPIFLKAEQ
                     QGKNRHTPLKTLFSQHLKPFMIGVLIATAGYVLFYILVAFTPIFVKSPVAVSQAGHAT
                     GLGLPVNLYTQYLLITSVIFGIAIFFSGIYSDKIGRRLLLLLATGATVVYGLTMPFFL
                     ENGTPTSIFIFLTIGMILIGLSFGPMAVILPELFPTEVRYTGASLAYTAAGILGASVF
                     TIIAVKINENFGLFGVGGYLSVASLLSFWALWQVHETKDLELEEI"
     regulatory      4750..4846
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            4914..6443
                     /gene="thiE"
                     /locus_tag="PXD18_001227"
     CDS             4914..6443
                     /gene="thiE"
                     /locus_tag="PXD18_001227"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDL6301666.1"
                     /translation="MSNYSNSPYQPNVIWTVAGSDSCAGAGLQTDLHTFHDFNLVGCS
                     VVTSVTAQHPHGVLCVTPVDDHTFRQQFEALLVQGYPNAIKIGLLCSQAQVEILCEYI
                     QKIRAESSHYCYVVYDPVAVASSGQALSDSILLQIVQQKLYPLVDLITPNGTELALLS
                     DTEIQTFGDVKTASHKLFAQGIKAVLAKGGHFEWLGETVRDYLLTANEIYAFSHARQQ
                     SVNTHGTGCTYASAVGAMLATGFDLADAVTVATAYLQKGLSEKQGRGQTALSSLCHTG
                     YPDDIAFFPQTELISAPLKLPKEPFAPTEYQLGLYPVVDSVKWLERLILVGVKTLQIR
                     IKNRPLAEIEQEIAHSVALAKQHNVRLFVNDYWQLAMKYQAYGVHLGQEDLATADLNA
                     IQQSGLRLGVSTHCYFEIMRALAVKPSYIAFGHVFPTQTKVMPSQPQGLTNLAKYVAL
                     VAPLNIPTVAIGGINEQSIENVMHTGVGSAAVVSAVTQAKDWQQAVKNLAKFANGGRN
                     E"
     gene            6436..7608
                     /gene="cytX"
                     /locus_tag="PXD18_001228"
     CDS             6436..7608
                     /gene="cytX"
                     /locus_tag="PXD18_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HDL6301667.1"
                     /translation="MNRTLSTLNSGLIWAGAGISASAIVVGTWIAPLGWQQGLLAIVL
                     GHLLGGILFFAAGLIGAKTGKNAMQTVQISFGRGSVFFSLANVLQLVGWTAIMIYTGA
                     EISNALSLALWEYSAFSLWAIVLGLLIVLWLFTGSNQVGKFKLVTLIAMFLLTLWLSI
                     KVLNGQENFPVSGEMPFSTAVELATIMPLSWLPLVSDYTAKAKKPFAATLSATIGYLI
                     TSAWMYALGLGMVLFTGQTEIAPMLLMTGMSLIGIMVMILSTVTTTFLDAYSAGVSAG
                     NITAKFKETPTAILVTIIGTLLAISLPVTQYENFLLLIGSVFAPMIAVQIADFFVLKR
                     HQAQPNVDWVAAGLWLVGFVLYHLLSYHQVHLLLGLTIPVMLVIFLSTIFVRRFTK"
     gene            7647..7856
                     /locus_tag="PXD18_001229"
     CDS             7647..7856
                     /locus_tag="PXD18_001229"
                     /inference="COORDINATES: protein motif:HMM:NF015737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL6301668.1"
                     /translation="MESLVLNNDWVVTPQAQLAYHTINGKADEERLNLLVARAGVRVA
                     KGFALNNGWNLQPYAEVNGIAEKGQ"
     gene            7864..8040
                     /locus_tag="PXD18_001230"
     CDS             7864..8040
                     /locus_tag="PXD18_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL6301669.1"
                     /translation="MQVNQYQFGVAENKGRVQGSLGLSAGNGNHRLGLEASVASGKKL
                     KQPFNVLVNYRYQW"
     gene            complement(8081..9937)
                     /gene="sppA"
                     /locus_tag="PXD18_001231"
     CDS             complement(8081..9937)
                     /gene="sppA"
                     /locus_tag="PXD18_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HDL6301670.1"
                     /translation="MLTILKAFYRIFRCIRECVINLFFILFILLLVPVVAFISSSGST
                     QKPVFNQGALRLNLDGYLADNREEFTDFYRLVQSELGSSEPFKISTFDVVQAISHAKN
                     DPKITGLVLDLQKLQSADFSSLDFIGNEINNFKQSGKPVIAVGEDYSQKQYYLASFAD
                     EIYLNKVGAVDLKGLNYSNTYFKTLLDKIEAEPHIFRVGTYKSAVEPFMRDDMSEEAK
                     QNARGWLNGTWQQTVATLAQNRNIEPQALDLSPANYIEKYKQAKGDDAQLALNQKWVS
                     QLVSSQESRDKLIAQFGKNSEGSYNQIEFLDYMTELNDRFAEVNAPKIAVVNVEGAIA
                     GGESDEMNVGSETLVKLLQQARDDKNVEGLILRINSPGGSAVASELIRQEVEAFQQAG
                     KPVVASMGGMAASGGYWIAATSDKIIASPNTLTGSIGIFGLAVTFEKTAKNLGVSEDG
                     IATSALAQQAGLKSLPQEQAEVLQIGIENGYDRFLELVSRGRKMPKEVVDKVAQGQVW
                     LGTDALKHGLVDELGNFNVAYNALSELINQKREAENQPKVEQFGLQWFAEQDDSLFGT
                     LARDFKAQLQFSVANWLDLPLLKQPQQQLETLSRFNDPKQMYLYCLNCGKID"
     gene            10040..10603
                     /locus_tag="PXD18_001232"
     CDS             10040..10603
                     /locus_tag="PXD18_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HDL6301671.1"
                     /translation="MQILDLLHHRRSNKKFGDKAPNAEQLEQILKAGLRVPDHGRLKP
                     YRFVVIEKSGMPQFGECLKSAVAEFDMGEERLKKAEKLANQAPMIIGVVATLDDSIAK
                     VPSWEQMITAGCATYAIQLAANAQGFDTVWITNKWINGSALRSAFGCQESDKIIALIM
                     LGSPAEGEQIALAPESESLEGFVRYLK"
     gene            complement(10674..12998)
                     /locus_tag="PXD18_001233"
     CDS             complement(10674..12998)
                     /locus_tag="PXD18_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HDL6301672.1"
                     /translation="MTDLNLKISQIIAGELNVGSHQILAAITLLGEGNTIPFIARYRK
                     EVTGGLDDTQLRHFETRLIYLREMDERRQTILKSIEEQGKLTDELKAKILSSESKTEL
                     EDLYLPYKPKRRTRGQIAIEAGLEPLADSLWNDPKQDPETLAANFVDAEKGVADTKAA
                     LDGARYILMERFSEDAELLAKLRQYLTAYATLESKVIDGKEEEGEKFRDYFAHSEPFN
                     SVPSHRALAMFRGRNEGVLSLSLNADPTAEEGTKSSHCEEIIREHLGVIFNNQPADKW
                     REQVIAWTWKIKAALHLETELMATLCEKAEEEAIDVFARNLSALLMAAPAGARNTMGL
                     DPGLRTGVKVAVVDNTGKLLDTATIYPHTGREAEAQLAIFSLIKQHNVELIAIGNGTA
                     SRETERFAKAVIKEIKENKPQTVVVSEAGASVYSASEFAANEFPNLDVSLRGAVSIAR
                     RLQDPLAELVKIEPKAIGVGQYQHDVNQSQLARKLDAVVEDCVNAVGVDLNTASAPLL
                     ARVAGMTKTLAQNIVAFRDENGRFTSRSELKKVPRLGPKAFEQCAGFMRIIGGKNALD
                     ASSVHPEAYPVVEKILQATTSTLAELMGNNSKIHSLNAKDFVDEQFGLPTVNDIFKEL
                     EKPGRDPRGEFKTAVFMDGVEEITDLKAGMILEGTVTNVANFGAFVDIGVHQDGLVHI
                     SMLSNSFVEDPHTVVKAGDVVKVKVLEVDAARKRIALTMRLDDKPTDKKEPTSGRNSA
                     EICKNTQKNDRLQSNNRNAFGNNAFADALKGWKK"
     gene            complement(12998..13552)
                     /gene="pilW"
                     /locus_tag="PXD18_001234"
     CDS             complement(12998..13552)
                     /gene="pilW"
                     /locus_tag="PXD18_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HDL6301673.1"
                     /translation="MFAKFFPKMTACILIFLLAACSSLPPSSSEVEFNRSEAVKARIN
                     LALAYLEQNDFPKAKQNIDKALAHDEKDYLPYSVLAYYYQQTGDAENAEKAYQTALKL
                     SQNRPDVLNNYGTFLCKQGQFQQAYQQFEQAVKSKAPYYHQADSLENMVLCAKKEPNL
                     QKIAETLTELEKLDKPRANLLKEN"
     gene            13772..14023
                     /locus_tag="PXD18_001235"
     CDS             13772..14023
                     /locus_tag="PXD18_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6301674.1"
                     /translation="MKIVVFQRKALKQLRKIPTGAEIRRKCDDLAYFPYCANIKALTN
                     HQYDYRFRVGNYRIFFNIEGETMNIVSIEEVKKRDERTY"
     gene            14007..14354
                     /locus_tag="PXD18_001236"
     CDS             14007..14354
                     /locus_tag="PXD18_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6301675.1"
                     /translation="MKELTNIQYLNNEEGKPAFAVLPIATLEWLKQKANIKTAIETGI
                     PSAVAGIALDNNYSALRAWREYLGLTQEEVAQRLGISQSAYSQHENAKNLRKTTRIKI
                     AYALGLNEEQLDF"
     gene            complement(14395..15555)
                     /gene="trmG/rlmN"
                     /locus_tag="PXD18_001237"
     CDS             complement(14395..15555)
                     /gene="trmG/rlmN"
                     /locus_tag="PXD18_001237"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA
                     large subunit methyltransferase RlmN"
                     /protein_id="HDL6301676.1"
                     /translation="MSELITNAGCGSAEQPKEKINLLNLNRQEMRELFAEMGEKPFRA
                     DQLMKWIYHFGEENFDNMSNINKVLREKLKRIAEIKAPEVAVEQRSADGTIKWAMQVG
                     DQQIETVYIPEDDRATLCVSSQVGCALACTFCSTAQQGFNRNLSVAEIIGQVWRASKI
                     IGNFGVTGVRPITNVVMMGMGEPLLNMNNVIPAMEIMLDDFAYGLSKRRVTLSTSGVV
                     PALDKMREQIDVALAISLHAPNDELRDELVPINKKYNIKMLMDSVNKYREVSNANHGK
                     VTIEYVMLDHVNDSTNHAHQLAEVLKNTPCKINLIPWNPFPEAPYGKSSNSRVDRFQK
                     TLMEYGFTVTVRKTRGDDIDAACGQLAGDVIDRTKRTLEKRKFGQGIAVKTH"
     gene            15815..16711
                     /locus_tag="PXD18_001238"
     CDS             15815..16711
                     /locus_tag="PXD18_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HDL6301677.1"
                     /translation="MKLSTIKKALVLTFGLSAAMAMAEPFKVVTTFTVIQDIAQNVAG
                     DKATVESITKPGAEIHDYQPTPKDIVKAQKADLVLWNGMNLERWFERFFENVKGKPAV
                     VVTEGITPMPITEGEYKNLPNPHAWMSTDNALIYIENIRAALVKYDPQNADTYNANAK
                     AYAEKVKGIAEPLRQRLAFIPEQQRWLVTSEGAFSYLAKDYNLKELYLWAINAEEQGS
                     PKQVKKVIDGVKANKIPVVFSESTVSDKPAKQVAKETGALYGGVIYVDSLSEKDGPVP
                     TYLDLLKVTIGTIVEGFERSKK"
     gene            16724..17467
                     /locus_tag="PXD18_001239"
     CDS             16724..17467
                     /locus_tag="PXD18_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HDL6301678.1"
                     /translation="MTTVSASISVENLSVRYNNGHIALQDVSFHLENGTICALIGVNG
                     GGKSTLFKSLMGLVKPLTGSVKLSQLPIAKALKQNLVSYVPQSEEVDWQFPVSVYDVV
                     MMGRYGYMNFLRRPSQTDKLKVEQAMQRLDVLHLKDRQIGELSGGQKKRVFLARALAQ
                     ESKIILLDEPFTGVDVKTENAIVELLKQLKNEGHLILVSTHNLASVPSFCDQVLMVNR
                     TLLAKGKTEEIFNNQNLERVFGGLLHYQK"
     gene            complement(17524..18333)
                     /locus_tag="PXD18_001240"
     CDS             complement(17524..18333)
                     /locus_tag="PXD18_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDL6301679.1"
                     /translation="MLNWILEPLQFEFMQIALITAILVAGVSAVLSCYLVLKGWSLMG
                     DAISHAVLPGVVISSLAGLPLSIGAFFSGLGCALSVGYLKENSRLKEDTVMGIVFSGM
                     FAFGILLFTAFNTGEHLTHILFGNLLGVTKSDLLQTLLISLFTFVVMVAKRKDFLLYC
                     FDVNQAKVAGLPVRLLHYGLLSLLALTIISAMQVVGVILVVAMLITPGITAYLLTKRF
                     DSMLLIALGVAIFSSVFGTLLSYHIDAATGPTIILVQAAIFFLSFAYSKIH"
     gene            complement(18326..19186)
                     /locus_tag="PXD18_001241"
     CDS             complement(18326..19186)
                     /locus_tag="PXD18_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDL6301680.1"
                     /translation="MLDLLLEPFTYNYMQKAIFVSMGVGLVCAFLSAFLMLKGWSLIG
                     DALSHAVVPGVAIAYALKLPYAFGAFFSGILAALSILWVKSLTKIKEDAVIGFIFTTF
                     FALGMFIVSLNPTSVDVNSIVMGNILGIADDDLWQVVLIIAISLLGLILFWKDLLLVF
                     FDEHHALSVGLSPLRYKVIFFTLLSACVVVALQTVGAILVIAMVVTPGATAYLLTDRF
                     PRLVLIAMLIGTLTSGIGAYLSYFLDGATGAVIVCLQTLIFLFAFCFAPKYGLITQKR
                     KLHRVEVQNA"
     gene            complement(19260..20045)
                     /locus_tag="PXD18_001242"
     CDS             complement(19260..20045)
                     /locus_tag="PXD18_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HDL6301681.1"
                     /translation="MMKKITILGLGWLGLPLAEALQNKGWRVAGTKRTVGELAIECYP
                     LDLNALAVTSEIEQLLAADALVIALPLSQIRPENYGCGIQTLVSLAIEKGLKHLVFTS
                     STSVLPMKSGVFDENAVVDSANLLVKMENWLLSQPIHCDILRLAGLVGKKRHPVFYLA
                     GKQNLSGAGQPVNLVHLEDCIAAISLLLEQPNGQRIFHLCAEQHPSRKDYYSEMAKRF
                     GLADLHFSEENQPLVRLIKADKICQELGFRYYYPDPYQFKVDI"
BASE COUNT         5775 a         4506 c         4231 g         5617 t
ORIGIN      
        1 cacaatatat tgtgttaatg aattagtaat ggaaaatctc agattcagct cggaacaaat
       61 tgtttggcaa gaagtgccga atgagacctc acttgctttt ctgattacag gctgcccgct
      121 tggctgtaaa ggttgccata gtgcggatag ctggaaagcc tgtcttggga aagagcttag
      181 cagtgaatat ctctctgaac gcctaaaacg ctaccaaggc ttaattagct gcgtattgtt
      241 tatgggcgga gaatgggaag cagaaaaatt actgccgctg ttgcaactgg caaaaaacca
      301 ggggctaaac acctgtcttt atagtggttt ggagcagcac gaaatcgccg agactttatt
      361 acacgagcta acctacttaa aaaccgggcg ttggattgcc gaacgaggag gattggaaag
      421 tttaaccacc aaccaacgct ttactgattt acgcaataac caaaatctta accatctttt
      481 tattcgagga gcttcaatat gattcgctta caaccgacac aattagacgg aaaactacat
      541 ttcattaacc aatatattca agccaaaaat gccgcagacg gttcaaaaat ggacgccaac
      601 gctaacgtca cgcaaaaaaa catagcgaca atggaacagg agctaatgaa agattttttt
      661 gtgcaaatca accgagcaaa agtgagtgaa aaaattgcaa aaatttttgg aaaagaaacc
      721 gcttgtgaat atttacgtca aatcgaagca cacgaaattt acgtacacga tgaaaccagc
      781 ctaaaaccct actgcgtttc agtcactatg taccctttct tgcgtgatgg tttgactaaa
      841 ctcggcggcg aatccaaagc cccgaaacat ttagcctcat tctgcggttc ttttatcaat
      901 tttgtctttg cagtcagttc tcagtttgcc ggtgcagtcg ccacggttga atttctgacc
      961 tattttgact attttgcccg caaagattac ggcgataatt acttacagac tcatcgttca
     1021 gatattgaaa accacctgca gcaggttgtg tatagcatca accaaccggc agccgctcgt
     1081 ggttatcaaa gcgtcttttg gaatatttca gtgtatgaca aattctattt tgaagcgatg
     1141 tttagccgtt ttgtttttcc tgattttgag aaaccaaatt gggaaaccac ttcaaaatta
     1201 caacttttct ttatgcaatg gttcaataaa gagcgaagca aagcgattct cactttccct
     1261 gttgtgaccg cagcaatgct taccgaaaag ggcaaatgta aagatgacga gtttgccaat
     1321 caaatggcaa aagagctatc tcaaggcaat tcattcttta tttatcaatc agataatccg
     1381 gattcccttg cttcttgctg ccgcttgaga aatgaaatca gcgatcatag cttctcctat
     1441 tcattagggg ctggaggtgt tgcgacaggt tcaatcaatg taattactat taatatgaac
     1501 cgtttggtgc aagataaccg tgatttaagc gaagaagtca gcaagatcca taaatatcaa
     1561 tacgcttacc gcaaactgat ggaagagtat ttagctgccg gtatgttgcc ggtttacgat
     1621 gccggtttta tttcactgca taaacaattc ctgactattg gcattaacgg aatggcagaa
     1681 gctgctgaat cacaaggttt aaccgtaggt tacaatccag actatattga ttttgtgcaa
     1741 tctcggttaa aaattatttt ccaagctaac caagcagccg gtgaaaagta tggggtaaaa
     1801 tttaataccg aatttgtgcc tgctgaaaat ttaggggtca aaaacgccaa atgggacaaa
     1861 gaggacggct atttcgtacc acgagattgc tacaattcct atttctatgt ggtagaagat
     1921 gaagaaatta atgctttgga taaattctta ctgcacggca gagagctgat tgaatggctg
     1981 gacggaggct ccgctctaca cttgaattta gacgaagcct taacccaaac cggatatcgc
     2041 tccttgctgg ataccgccgc taaaaccggc tgcaattatt tttgtattaa cgttaaaatc
     2101 acgatttgca acgaatgtag ccacatcgac aaacgcacgt tgcacagttg tagcaaatgt
     2161 ggctccgata atattgatta cggcactcgg gtaatcggct atttaaaacg agtctccgcc
     2221 tttagttccg cccgccaaaa agagcacagc ttgcgtttct atcaccgaga agcagcttaa
     2281 ttgaaaactg cagttgtagc cctttacaac cgctttttta gtgattatat taaagcctca
     2341 tttagtcggg gtgcttgcct aagggcaagc tgagaaatac ccgttgaacc tgatgcagtt
     2401 agcactgacg taggaaacta aaggcgtaaa cccatctatt ccccgttggt gttggtgcgt
     2461 tgtttttcaa tcatattaag gaataaacga tgaccacatc actcccctat cactcgcatt
     2521 atttgcaaaa aattcgacaa aatcgaccgc ttgttcacaa cattaccaac attgttgccg
     2581 ctaatttttc tgccaacggc ttattggctc ttggtgcttc tcccattatg gcagctgcta
     2641 ttgaggagat ggaatccgtg ccggcactca gtaacgccgt ggtgattaat atcggcacgc
     2701 ttatcggcaa agaagtagaa gcaatggagc ttgctggcaa aaccgccaac cgtttaggta
     2761 ttccgctcat tcttgaccct gtcggcgttg gagcaacacc tttccgccgt caaacagttg
     2821 aaaccttagt cgaccaaatt cacttcaccg ccattcgtgg aaatgcgggg gaactagcta
     2881 ccctcgccgg tgtagaatgg caagccaaag gcgttgatgc cggcgaaggc tcgcataatg
     2941 tggttgaaat cgcccaacag attgccaaac gttaccaaac cttagtcgca atcagtggtg
     3001 aaaccgatgt ggtaagctct ggctcacaca cagctttatt gcacaacggc agcccgatgt
     3061 tccccaaaat taccgcttca ggctgtttat taagtgcggt atgcggggca ttcttagccg
     3121 ttgccgacaa agagcactat ttcaacgcac ttattgaggc ttgcgccgct tatgccgttg
     3181 caggcgaagt ggctgctcaa gcactcaaac caactcaata cgggcaattt gccgtcaatc
     3241 tgctggatac ccttggggca ttaacgcctg aaaccgttga gcaatatgtg agggttgaat
     3301 atgtctaaaa ctcactcaaa cccaactaaa gtggcggttg cctcaatggt cggcacggcg
     3361 attgaatatt ttgataacta catctacacg atggcagcag tgctggtgtt taatgtgcag
     3421 ttttttaata gcgatgatcc ggtttccaac caattaatgt cgctttccgt actagctctt
     3481 gcctttttca cccgcccgat ggggtcgatt ttattcgggc atttcggcga taaatacgga
     3541 cgcaaacaaa ctctgattgc ctcgctctta ttaatgggct tatctaccgt agcaatcggg
     3601 cttttgccta attatgccgc cattggcatt tgggcaaccg tgttactctg cctctgtaga
     3661 atcggacaag gtttaggctt aggcggcgaa tggggcggag ctgctctcgt tgccactgaa
     3721 cacgccccga aacacaagcg ggcatttttt ggtatttttc cgcaaatggg cgccccaatc
     3781 ggcttgctgt tggcaaacgg agcgttctac ttggtgaatt taatttacgg tgaacaaacc
     3841 ttcttggatt gggcgtggcg aattccgttt gtcgcttcta ttgtgatgat cgccattggg
     3901 ctttatatcc gaattaagat cagcgaaagc ccgattttcc ttaaagcgga acaacaaggt
     3961 aaaaaccgcc ataccccgct taaaactttg tttagccaac acctcaagcc ttttatgatc
     4021 ggcgtgctga ttgccaccgc cggctatgtg ttgttctaca ttttagttgc tttcaccccg
     4081 attttcgtca aaagcccggt ggcagtttct caagcaggac acgctacagg cttaggttta
     4141 ccggtaaatc tctacaccca atatttgctg attacctccg tgattttcgg cattgcgatt
     4201 ttcttctccg gcatttattc agacaaaatc ggacgccgtt tactgctgtt acttgccaca
     4261 ggagcaaccg tagtttacgg cttaacaatg ccgtttttcc tcgaaaacgg cacaccgact
     4321 tcgatcttta ttttcctcac cattggaatg atcttaatcg gcttaagctt cggcccgatg
     4381 gcagtaattc tacccgaact cttcccaaca gaagtacgtt acacaggggc ttcgcttgcc
     4441 tacaccgctg ccggtatttt aggagctagc gtgttcacta ttattgcggt caaaatcaat
     4501 gaaaatttcg gcttattcgg tgtaggcggc tatttatcgg ttgcctcatt actgagcttc
     4561 tgggcattgt ggcaagtcca cgaaaccaaa gatttggaat tagaggagat ataaaaaacc
     4621 actcacttaa cgacggggca agttaccacc ttgccccaag atgagggaat gcaaatttcc
     4681 ctctaataga cttcacaacg gatattttgc atttttttat aaaaaataac cgcttgtaag
     4741 ctatactaaa aacgcttgtc ggagtgccgt aaggctgaga tcgcaacagc gagatccgtg
     4801 gaacctgtag gttagtacct gcgtagggaa caagttttac ccaaattcag attttgggat
     4861 cattaccaca tctctggcaa gcaaaaccct aagcatatta tgaggatttt gcgatgtcta
     4921 attattcaaa ctctccatac caacctaacg tcatttggac ggttgccggc tcagattcct
     4981 gtgccggtgc cggtctgcaa accgatttac atacctttca cgattttaac ctagtgggtt
     5041 gttcagtagt tacttctgta acggctcaac atccgcacgg tgtgctgtgt gtaacgcctg
     5101 ttgatgatca caccttccgc caacagtttg aagccttgct ggttcaaggc tacccgaacg
     5161 caatcaaaat cggcttactc tgctcgcaag cacaagtaga gatcttgtgt gaatatatcc
     5221 aaaaaatccg tgcagaaagc tcgcattatt gttatgtggt ttacgaccct gtggcagtgg
     5281 caagcagtgg gcaggcgtta tccgacagta ttttattgca gatagtgcaa caaaaattgt
     5341 atccgctggt ggatttaatc actccaaacg gcactgaact cgctttatta agcgacacag
     5401 aaatccagac ctttggtgat gtgaaaaccg ctagccacaa actgtttgca cagggaatca
     5461 aagccgtgtt agccaaaggt ggacattttg aatggctggg ggaaacggta agagattatc
     5521 tgctgactgc aaatgaaatt tatgccttta gtcacgcccg acagcaaagt gtgaataccc
     5581 atggcacagg ttgcacctat gcttcagcgg ttggagcgat gttggcaacc ggctttgatt
     5641 tagctgatgc cgtcactgtt gccaccgctt atttgcaaaa aggcttatcg gaaaaacaag
     5701 gcagagggca aactgcttta agttcacttt gccacaccgg ctaccctgat gatatcgctt
     5761 tcttcccaca aaccgagctg atttctgccc ctcttaaatt gccgaaagag ccttttgctc
     5821 caacggaata tcaacttggg ctttaccctg ttgtagatag cgttaaatgg cttgaacgct
     5881 taattcttgt aggggtaaaa accttgcaaa ttagaatcaa aaatcgaccg cttgcagaga
     5941 ttgagcaaga aattgcccat tcggtcgcac tggcgaaaca gcacaatgtg cgtttgtttg
     6001 taaatgatta ctggcagtta gccatgaagt atcaggctta cggcgtgcat ttagggcagg
     6061 aggatttagc caccgccgat ttaaatgcaa ttcagcaatc tgggttacgg cttggtgttt
     6121 caacccactg ctactttgaa ataatgcggg cattggcggt gaaaccgtct tatatcgctt
     6181 ttggccacgt tttccctact caaaccaaag taatgccgtc tcaaccacaa ggcttaacaa
     6241 atttagccaa atatgttgct ctcgttgcac cgcttaacat tccaactgtg gcgattggtg
     6301 gaattaatga gcaaagcatt gaaaatgtaa tgcataccgg tgtcggcagt gccgcggtgg
     6361 taagtgccgt tacccaagca aaagattggc aacaagcggt caaaaactta gcaaaatttg
     6421 caaatggagg ccgtaatgaa tagaactctt agtacgctaa acagtggttt gatttgggcg
     6481 ggagcgggca ttagtgccag tgcaatcgtg gttggcactt ggattgcccc acttggctgg
     6541 caacaaggct tgctggcgat agtgctaggg catttattag gcggcatttt gttttttgct
     6601 gccggcttaa ttggggcgaa aaccggcaaa aatgcgatgc aaacggtgca aatttccttt
     6661 ggcagaggct cggtgttttt ctcccttgcc aatgtgctac agcttgttgg ttggacagcc
     6721 attatgatct atacaggggc agagatcagt aatgccctta gccttgcctt atgggaatat
     6781 tcggctttct cgctttgggc aatcgtgctt gggttgctga ttgtgctatg gttatttacc
     6841 ggctctaatc aggtcggaaa attcaagtta gtgacattga tagcgatgtt tttgctcacc
     6901 ttatggctaa gcattaaggt attgaatggg caggaaaatt ttcctgtttc gggtgaaatg
     6961 ccgtttagca ccgcagtgga attagcaact attatgcctc tttcgtggct acctttggta
     7021 tcagactata ccgctaaagc gaaaaagcct tttgccgcga ccctttcggc gaccataggc
     7081 tatttgatca ccagtgcgtg gatgtatgcg ttaggtctgg gtatggtgct atttaccggg
     7141 caaaccgaaa ttgcccctat gttactaatg acaggaatga gccttatcgg cattatggtg
     7201 atgattcttt cgactgtgac taccacgttt cttgatgcct attccgccgg tgtcagtgcc
     7261 ggcaatatca cggcaaaatt caaagaaacc ccaaccgcca ttctagtcac aatcatcggc
     7321 acgctactgg caatcagttt accggttacc caatatgaaa atttcctgct gctgataggc
     7381 tcggtattcg ccccgatgat tgccgtgcaa attgcggatt tctttgtgtt aaaacgccac
     7441 caagcacagc ctaatgttga ttgggttgct gccggattat ggcttgtcgg cttcgtgcta
     7501 taccaccttc tctcttacca ccaagtgcat ttactactcg gcttaaccat tccagtgatg
     7561 ttagtgattt ttctcagcac catttttgtg aggaggttca caaaatagaa agataagcgg
     7621 ttcaattgga gtgaaaattt gctaaaattg agtcgcttgt tttaaacaat gactgggtag
     7681 taacaccaca agctcaactt gcctaccaca ccattaacgg taaagccgat gaggaacggt
     7741 taaatctttt agttgcccgt gccggcgtaa gagtagcaaa aggctttgcc ttgaataatg
     7801 gttggaatct gcaaccttat gcggaagtaa acggcattgc tgaaaaaggc caatagtacg
     7861 aaagtgcaag taaaccaata tcagtttgga gttgccgaaa acaagggcag agtgcaaggt
     7921 tcacttggct tgagtgcagg aaacggtaat caccgtttag gtttagaggc atcagttgct
     7981 tcaggtaaga aactgaaaca accatttaat gtattagtaa attatcgtta tcaatggtaa
     8041 tttaagaggg caggtgaaaa cctgccctta aattcaataa ttaatctatc ttcccacaat
     8101 ttaaacagta aagatacatc tgtttcggat cgttaaaacg tgaaagagtc tctagctgtt
     8161 gttgcggttg cttcaacagc ggtaaatcaa gccaatttgc cacgctaaat tgtaattgag
     8221 ctttgaaatc acgggcaagc gtgccaaata agctgtcatc ttgctccgca aaccattgta
     8281 agccgaactg ttcgacttta ggttggtttt ccgcttcacg tttttggttg atcaattcag
     8341 ataacgcatt atatgccaca ttaaaattgc ccaactcatc aaccaatccg tgttttaacg
     8401 catcagttcc cagccacact tgcccttgag ccactttatc taccacctct tttggcattt
     8461 tcctgccacg agaaaccagc tctaaaaaac ggtcgtagcc gttttcaatc ccaatttgca
     8521 gcacttctgc ctgctcttgc ggtaggcttt ttaaaccggc ttgttgtgct agggcagaag
     8581 tcgctatgcc gtcttcgctc acaccgagat ttttagcggt tttttcaaaa gttactgcta
     8641 aaccgaaaat accgatagag ccggtaagcg tattcgggct agcaataatt ttatcgctgg
     8701 tagccgcaat ccaataaccg cccgatgctg ccattccgcc cattgaagca accaccggtt
     8761 tgccggcttg ttgaaaggct tccacttctt ggcgaatcag ttcagacgcc acagcactgc
     8821 cgccggggct gttaatgcgt agaattaagc cttccacatt tttgtcatct cgagcttgtt
     8881 gcagtaattt taccagcgtc tcgctgccca cattcatttc gtcactttca ccgccagcaa
     8941 tcgccccttc cacattcact accgcaattt tcggagcatt cacttctgca aagcggtcgt
     9001 ttagttcagt catataatct aaaaattcaa tctggttata actgccttcg ctgtttttgc
     9061 caaactgtgc aatcagttta tcccgacttt cttggctgga cactaactga ctaacccatt
     9121 tttgatttaa tgccagttga gcatcatctc ctttagcttg tttatatttt tcaatgtaat
     9181 tggcaggcga taaatccagt gcttgcggtt caatgttgcg gttttgagct agtgttgcca
     9241 cagtttgttg ccaagtgccg tttaaccagc ctcgggcatt ttgtttcgcc tcctcagaca
     9301 tatcatcacg cataaacggc tcaaccgccg atttataagt accgacacgg aaaatatgcg
     9361 gttcagcctc aattttatcg agcaaggttt tgaaataagt gttggaataa tttaagcctt
     9421 ttaaatccac cgcaccgact ttattgagat aaatttcatc agcaaaggaa gcaagataat
     9481 attgtttttg cgagtagtct tcgcccactg caatcaccgg cttgcccgat tgtttgaagt
     9541 tgttgatttc attgccgata aaatccaatg agctgaaatc agcactttgt agcttttgca
     9601 gatctaacac caagccggta attttcgggt catttttagc gtggctaatc gcttgcacca
     9661 catcaaaagt cgagatttta aacggctcgg aactacctaa ttccgattgc accaagcggt
     9721 agaaatcagt gaattcttcc cgattatctg ctaaataacc atctaaattt aaacgtaacg
     9781 ccccttgatt gaacaccggc ttttgcgtgc tgccagaaga gctgataaat gcgaccaccg
     9841 gcactaatag caaaataaac agaataaaaa agagattaat gacacactct ctaatacaac
     9901 ggaagattcg gtaaaatgct tttaaaatcg ttaacatcgg aaattcctaa aaataaactc
     9961 agtcggcaca gtataaagca atcgctaaat gaagaaaata tgctattctt gaacgcaaaa
    10021 aattaacaaa ggaacgctta tgcaaatctt ggatttatta caccatcgcc gttcaaataa
    10081 aaaatttggc gataaagccc cgaatgcaga acaactggaa caaattctaa aagccggctt
    10141 gcgagtgccg gatcacgggc ggttaaagcc ttatcgcttt gtggtgattg aaaaaagcgg
    10201 tatgccacag tttggtgaat gcttaaagtc tgcggtagca gaatttgata tgggcgagga
    10261 acgcttaaaa aaagcggaaa aattagctaa tcaagctcca atgattatcg gcgtggtagc
    10321 aacattagac gacagcatcg ccaaagtgcc aagttgggaa caaatgatta ccgcaggctg
    10381 tgcaacttat gcgattcagt tagcggcaaa tgcacagggc tttgatacgg tttggatcac
    10441 caataaatgg attaacggct ctgctcttcg ctccgctttt ggttgccaag aatctgataa
    10501 aatcattgcc ttaattatgc ttggctcacc ggcagagggc gagcaaattg cattagcccc
    10561 tgaaagtgaa agtttagagg ggtttgtacg ttatcttaag taagcaggtt aacagataaa
    10621 agttagtaat aagggcgaaa aatatttcgc ccttgctttt atctgttttc gccttacttc
    10681 ttccagcctt ttaacgcatc ggcaaaggca ttgttaccaa aagcgttgcg attgttgctt
    10741 tgcaagcggt catttttctg cgtatttttg caaatttctg ctgaatttcg accgcttgtt
    10801 ggctcttttt tatcggttgg tttgtcgtct aaacgcatcg taagggcaat acgtttgcgg
    10861 gcagcgtcca cctcaagcac tttgactttc accacatcac cagctttcac taccgtgtgc
    10921 ggatcttcaa caaaagagtt tgagagcatt gaaatatgca ccaagccatc ttggtgtacg
    10981 ccaatatcga caaaagcccc aaagtttgcc acattggtca ctgtgccctc caaaatcata
    11041 ccggctttga ggtcggtaat ttcttccacg ccgtccataa acacggcggt tttaaactct
    11101 ccacgagggt cacgccccgg tttttctaac tctttgaaaa tatcgttcac cgttggtaaa
    11161 ccaaactgct catccacaaa atctttggcg ttgagcgagt gaattttgct gttgttaccc
    11221 attaattctg caagtgttga ggtagttgcc tgtaagattt tttctaccac cgggtaagct
    11281 tccgggtgaa cgcttgaggc atcaagggca tttttcccac cgataattcg cataaaaccg
    11341 gcacactgtt caaaggcttt cggccctaaa cgaggcactt ttttcagctc tgagcggctg
    11401 gtaaaacggc cgttttcgtc acggaatgcc acgatatttt gtgccaatgt tttggtcatt
    11461 cccgccaccc gagccagcaa cggagcggag gctgtattca gatccacgcc cactgcgttt
    11521 acacaatctt ctactaccgc atcgagttta cgggcaagtt gggattggtt tacatcgtgt
    11581 tgatactgcc caacaccaat cgcttttggt tcgattttca ccaactcggc aagtggatct
    11641 tgcaaacggc gggcaatcga aaccgctccc cgtaatgaaa cgtctaaatt tggaaactcg
    11701 ttagccgcaa attcagaggc agaatagacc gatgccccag cctcactcac caccaccgtt
    11761 tgcggtttat tctctttgat ttctttaatc accgctttgg caaaacgttc ggtttcacga
    11821 gaggccgtac cgttaccaat cgcaatcagt tccacattgt gttgtttgat taagctgaaa
    11881 atcgcaagct gtgcctccgc ctctcgccca gtgtgagggt aaattgtggc ggtatccagc
    11941 aatttaccgg tgttatccac caccgccact ttcacgccgg tacgcaagcc cgggtctagc
    12001 cccattgtat ttctcgcacc ggcaggggct gccattaata atgccgagag attgcgggca
    12061 aacacatcaa tcgcctcttc ttcagctttt tcacacaggg ttgccattaa ttcggtttct
    12121 aaatgcagag ctgctttgat tttccacgtc caagcaatca cttgctcacg ccatttatct
    12181 gctggttgat tattaaaaat cacgcccaaa tgctcacgaa taatttcttc acaatggctg
    12241 gattttgtgc cttcttctgc agtcggatcg gcatttaatg aaagtgataa caccccttca
    12301 tttcgcccac ggaacatcgc caaagcacgg tgggaaggca cgctgttaaa cggctcgcta
    12361 tgagcaaaat aatcacggaa tttctcgccc tcttcctctt tgccgtcaat cactttcgat
    12421 tccaacgtgg cgtaagcggt caaatattgg cgaagttttg caagtagctc agcatcttcg
    12481 ctaaaacgct ccattaaaat atatcttgcc ccgtctaatg cggccttggt atccgcaacg
    12541 cctttttccg catcaacaaa gtttgccgct aaggtttcag gatcttgttt cggatcattc
    12601 cataaactgt ccgccaatgg ctctaaccct gcttcaatcg caatttgccc tctggtgcga
    12661 cgttttggtt tatacggcaa atagagatct tccagctcgg tcttgctttc actgcttaga
    12721 attttggctt ttaattcatc ggttaatttg ccttgttctt caatcgactt caaaatggtt
    12781 tggcggcgtt cgtccatttc acgcaaataa attaagcggg tttcaaaatg gcgaagttgg
    12841 gtgtcgtcta gcccgccggt cacttcttta cggtaacgag caataaatgg aatggtattg
    12901 ccctcaccta atagcgtgat ggctgcaaga atttggtgtg agccaacgtt gagttcgccg
    12961 gcaataattt ggctgatttt tagatttaag tcagtcatta gttttccttc aataaatttg
    13021 ctcgaggttt atccaatttc tcaagctcgg tcaatgtttc ggcaattttt tgcagattcg
    13081 gctctttttt cgcacataac accatatttt ctaagctatc cgcttggtga tagtagggtg
    13141 ctttgctttt gacagcctgc tcaaattgct gataagcctg ttgaaattga ccctgtttac
    13201 ataaaaaagt gccgtaatta ttcagcacat cagggcggtt ttgactcaat ttcagtgccg
    13261 tttggtaggc tttttcggca ttttcagcat cacctgtttg ttggtaataa taggcaagca
    13321 ccgaataagg gaggtaatct ttttcatcgt gagccaaggc tttatcaata ttctgcttag
    13381 cttttgggaa atcattttgc tccagataag ctaaagccaa attaatacgg gcttttaccg
    13441 cttccgagcg gttaaattcg acttcagagg aagaaggggg aagagaagaa caagccgcta
    13501 ataaaaaaat cagaatacaa gcggtcattt ttggaaaaaa ttttgcaaac ataacgttct
    13561 cctacaacaa agggcttaat tttactgttc catcctcgct aagactagcg attttttgcg
    13621 aagaagaaaa atttttcgtt ttcatttttc gacgcagatc gcaaaaataa taatggggtg
    13681 ttgtgctagg gtaaatggta ggaatacact ctctatttaa tataagaatt tcattgaaaa
    13741 aacttataaa acttataaaa tagaggcaaa aatgaaaata gtggtattcc agcgtaaagc
    13801 cttaaagcaa ttacgaaaaa tcccaactgg tgcagaaatt cgccgaaaat gtgatgattt
    13861 agcttacttt ccctactgtg ccaatattaa ggcattaaca aatcatcaat atgattatcg
    13921 ctttcgggtc ggaaattacc gtattttttt caatattgaa ggcgaaacga tgaatattgt
    13981 gtctatcgaa gaggttaaaa aacgagatga aagaacttac taatattcaa tatttaaata
    14041 atgaagaagg aaaacctgcc tttgccgtac ttccgatagc aacacttgaa tggcttaagc
    14101 agaaagcaaa tattaaaacc gcaatagaga ccggtattcc atctgctgtt gctggaattg
    14161 cattagataa taactactca gctctgcgtg cttggcggga atatttaggt ttaactcaag
    14221 aagaggtggc acaacgcttg gggatttcgc aatcagctta tagccaacac gaaaatgcaa
    14281 aaaatctacg aaaaacgacc cgcataaaaa ttgcctatgc gttgggttta aatgaagagc
    14341 aattagattt ctaataacaa aaaggcagga acctctgcct tttcactatt cagattaatg
    14401 ggttttaacc gcaatacctt gcccgaattt acgtttttca agggtgcgtt tggtgcggtc
    14461 aatcacatcg ccagcaagct gtccgcaagc ggcatcaata tcatcacctc gtgttttacg
    14521 cactgttacc gtgaaaccgt actccatcaa ggttttttgg aaacgatcta cccgagagtt
    14581 agagctttta ccataaggag cttctgggaa cgggttccac ggaatcaagt taattttaca
    14641 cggcgtgttt tttaatactt cagcaagttg gtgggcgtgg tttgtgctgt cattgacatg
    14701 atctaacatc acatattcaa tcgtgacctt gccgtggttg gcgttagaaa cttcacggta
    14761 tttattcacc gaatccatca acattttgat gttgtacttt ttattaatcg gcactaattc
    14821 atcacgcagt tcatcgttcg gagcgtgaag tgaaattgcc aacgccacat caatttgctc
    14881 acgcattttg tctaatgccg gcaccacacc cgaagtggaa agcgtgacac gacgtttaga
    14941 taagccgtaa gcaaaatcat ctaacatgat ttccattgcc ggaatcacgt tattcatatt
    15001 cagcaatggt tcacccattc ccatcatgac cacattggta atcgggcgaa caccggtcac
    15061 gccaaaattg ccgataattt tagaagcacg ccacacttgc ccgataattt ccgccacgct
    15121 taagttacgg ttaaagcctt gttgagcggt tgagcagaag gtacaagcca aggcacagcc
    15181 tacttgtgaa gaaacacaca gggttgcacg gtcatcttca ggaatatata ccgtctcgat
    15241 ttgctgatcg cccacttgca ttgcccattt aatcgtaccg tctgcagaac gttgttctac
    15301 cgccacttca ggggctttaa tttcggcaat acgctttaat ttttcacgca atactttatt
    15361 gatattgctc atattatcga aattttcttc gccaaaatgg tagatccatt tcattagctg
    15421 gtcggcacgg aaaggttttt cccccatttc tgcaaacagt tctcgcattt cttgacgatt
    15481 aagatttaat aaattgattt tttcttttgg ttgttcagca gacccacagc ctgcattggt
    15541 aatcagttct gacataaagt tgaaagcctc gttattacac ggattacggc aaaaggttag
    15601 ggcaaatgcc cttattttgc gattggattt taaagcgtgc aattttactg gctcttgagg
    15661 gattaggcta gtaattttta atcaaaagag ttgaattgcc tgagtaaact tatcaagaat
    15721 aaccttataa aaacaagact atttacatca ttcccaatgt tctatagaat agctttcgat
    15781 aattctcatt ctcaataaca aaaggaggct aaaaatgaaa ctatcaacaa ttaaaaaagc
    15841 attggtatta acctttggtt taagtgcagc gatggcaatg gcagagccgt ttaaagtagt
    15901 taccactttt accgtgattc aagatattgc acaaaatgtc gccggcgata aagccactgt
    15961 ggaatccatt actaaaccgg gtgctgaaat tcacgattat caaccaacac caaaagacat
    16021 tgtaaaagct caaaaggcag acttagtgtt atggaacggt atgaaccttg agcgttggtt
    16081 tgaacgtttc tttgaaaatg taaaaggtaa accggcggtt gtcgtcaccg aaggcatcac
    16141 cccaatgccg attaccgaag gtgaatataa aaatctacca aatccgcacg cttggatgtc
    16201 caccgataac gcattaattt acattgaaaa tattcgtgcg gctttagtaa aatatgaccc
    16261 acaaaacgca gacacctata atgccaatgc aaaagcctat gctgaaaaag taaaaggtat
    16321 tgctgagcca ctccgccaac gtttagcttt tattcctgag cagcaacgtt ggttagtaac
    16381 cagtgaaggg gcatttagct atttagcgaa agactacaac ttaaaagaac tttatttatg
    16441 ggcaatcaat gcggaagagc aaggttcgcc aaaacaagtg aaaaaagtga ttgatggtgt
    16501 aaaagccaac aaaatccctg ttgtgtttag cgaaagtacc gtttccgaca aaccggcaaa
    16561 acaagtggcg aaagaaaccg gtgcattata cggtggcgta atttatgtgg attcactttc
    16621 agagaaagat ggtccggttc caacctattt agatttgctt aaagtgacta tcggcaccat
    16681 tgtcgaaggg ttcgaacgaa gcaaaaaata ataagattta gcaatgacaa ctgtttcagc
    16741 ctccatttcc gtcgaaaatt tatcggtccg ttataataac ggacatatcg ctttgcaaga
    16801 tgtctcgttt catctggaaa acggcacaat ttgtgcatta atcggcgtga atggaggtgg
    16861 aaaatccact ctgtttaaaa gtttaatggg gctggttaag ccattaaccg gctctgttaa
    16921 gctgagtcag ctcccgattg ctaaagccct caaacaaaat ttggtttcct atgtgccaca
    16981 aagtgaagaa gtggactggc aatttccagt ttcggtttac gatgtggtaa tgatggggcg
    17041 atacggctat atgaattttc tacgccgccc aagccaaacc gataagctca aagtagagca
    17101 agcaatgcaa cgccttgatg ttttacatct caaagacagg caaatcggcg aactttccgg
    17161 cgggcaaaaa aaacgggtat ttttagcccg tgccttagct caagaaagta aaatcatctt
    17221 acttgatgag cctttcaccg gtgtggatgt taaaaccgaa aatgcgattg ttgagctact
    17281 taaacagctt aaaaatgagg ggcatttgat tttagtttcc acccacaacc ttgccagcgt
    17341 accaagcttt tgcgatcagg ttttgatggt caatcgcacg ctactggcaa aaggtaaaac
    17401 ggaagaaatc tttaataatc aaaatttaga acgggtgttc ggcggtttat tgcattatca
    17461 aaagtagtgt ttcagcaaca aatcacaaac aaatagggag gcaaatgcct ccctattttt
    17521 gtatcaatga atcttagaat atgcaaaact gaggaaaaaa atggccgctt gcacgagaat
    17581 aatcgtcggc cctgttgcgg catcaatatg gtagctaagc aacgtgccga ataccgatga
    17641 aaatatcgca acgcctaagg caatcagtaa catactatca aaccgcttag tcagcaggta
    17701 agcagtgatc cccggggtaa tcaacattgc caccactaaa atcacgccca ccacttgcat
    17761 tgcactgata atagttaaag caagcaagga aagtaaacca taatgcaata atctaaccgg
    17821 taagcctgct actttggctt gattaacatc aaagcaatag agcaagaagt ctttgcgttt
    17881 cgccaccatc accacaaagg taaagaggct tatgagtaaa gtctgaagca aatcgctttt
    17941 ggttacgcct aatagattac caaataaaat atgggttaaa tgctcaccgg tattaaaggc
    18001 ggtaaacagc aagatcccaa aggcaaacat acctgaaaac acaatcccca ttaccgtgtc
    18061 ttctttcaag cgactatttt cttttaaata gcccaccgat aaggcacagc ctaatcctga
    18121 aaaaaacgcc cctattgaga gtggtaaccc ggcaagtgag gaaatcacca caccgggcag
    18181 aacagcgtgc gaaattgcat cgcccattaa agaccagcct ttcagcacca gatagcaaga
    18241 taaaaccgca ctcacgccag caactaaaat tgcggtaatt aacgcaattt gcataaattc
    18301 aaattgcaac ggctctaaaa tccaattaag cattttgaac ctccacacgg tgcaatttcc
    18361 gcttttgagt aatcaagcca tatttaggag caaagcagaa tgcgaataag aaaattaagg
    18421 tttgtaagca cacaattacc gcaccggttg caccgtctaa aaagtagctt aaatatgccc
    18481 caatccctga tgtcagcgtg ccgataagca ttgcgatcag cactaatcta gggaaacggt
    18541 cggtaagtaa ataagcagtt gctcccggcg tgacgaccat cgcaataacc aaaattgccc
    18601 caaccgtttg cagagccact actacacagg cacttaataa ggtaaagaaa atcactttat
    18661 agcgtaatgg cgaaagcccg actgacaatg cgtggtgttc gtcaaaaaag acgagtagca
    18721 aatccttcca aaataggatt aaacccagta acgaaatcgc aataatcagt accacctgcc
    18781 acaagtcatc atcagcaatg cctaaaatat ttcccattac aatcgaatta acatcaaccg
    18841 atgttggatt gagggaaaca ataaacatac caagcgcaaa aaaagtcgtg aaaataaagc
    18901 cgataaccgc atcttcttta attttcgtca ggctttttac ccaaagaatc gataatgccg
    18961 ccaaaatccc ggaaaaaaac gcaccaaagg cgtagggcaa ttttagtgca taagcgatgg
    19021 caacacctgg cactacagcg tgtgataagg catcaccaat caaagaccag ccttttaaca
    19081 tcaaaaaggc ggaaagaaaa gcacaaacta accccacgcc catactgaca aaaatcgctt
    19141 tttgcatata gttgtaggta aaaggctcta ataaaagatc aagcataaaa tcctaacaag
    19201 ttgttgataa tagttcgcat atactatcat ataaactcct tttcttgtat ggattaaact
    19261 taaatatcta ctttaaattg ataaggatca ggatagtaat aacgaaaacc aagctcttgg
    19321 caaattttgt ctgcttttat cagccttaca agcggttgat tttcttcaga aaaatgcaaa
    19381 tccgctaacc caaaacgttt tgccatttca ctataataat ctttacggct tgggtgctgt
    19441 tcggcacata aatgaaaaat acgctgcccg ttcggctgct ccaacagcaa tgaaatggct
    19501 gcaatacagt cctctaaatg cactaaattg accggctgcc ctgctccact caagttctgt
    19561 tttcccgcca aataaaaaac cgggtgccgt tttttgccca ccaagccagc taaacgcaaa
    19621 atatcacaat gaattggctg gctcagcaac caattttcca tttttactaa taggttagca
    19681 gaatcaacca ctgcattttc atcaaaaacg cccgatttca ttggcaaaac cgaagtcgag
    19741 ctggtgaaaa ccagatgttt caagcccttt tctattgcaa gcgaaactaa tgtttgaata
    19801 ccgcaaccgt aattttcagg gcgaatttgg ctaaggggca aggcaatcac taacgcatca
    19861 gcagcaagta attgctcgat ttcgcttgtc actgctaacg catttaaatc tagaggataa
    19921 cattctatcg ctaattctcc gaccgttcgc ttagtacctg caacacgcca gcccttattt
    19981 tgtaatgctt cagctaaagg tagtccgagc cagccaagcc ctaaaatggt aatttttttc
    20041 atcatttacg tttctcaaga ttaaaattgg aatgagggga aattcaggta caaaaaaagc
    20101 acctcgtggt gctatctatt ttatttcta
//
LOCUS       DANLXD010000042        20040 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.042, whole genome shotgun sequence.
ACCESSION   DANLXD010000042 DANLXD010000000
VERSION     DANLXD010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20040)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20040)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20040
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.042"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            192..440
                     /gene="rpsP"
                     /locus_tag="PXD18_001243"
     CDS             192..440
                     /gene="rpsP"
                     /locus_tag="PXD18_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HDL6301682.1"
                     /translation="MVTIRLTRGGAKKRPFYQIVVVDSRSPRDGRFIERIGFFNPLAA
                     GQAERLRLDVAKVDAWVAKGADLSDRVASLVKEARKAA"
     gene            473..1000
                     /gene="rimM"
                     /locus_tag="PXD18_001244"
     CDS             473..1000
                     /gene="rimM"
                     /locus_tag="PXD18_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005626427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HDL6301683.1"
                     /translation="MSEQKIEVVGKLGSTYGIRGWLRLYSSTEQTESIFDYQPWFLKI
                     KGQWQQVELESWRYHSNDLIVKLKGTEDREAAQLLTNAEIGVDLSVFPELEEGDYYWH
                     DLIGCSVVNLEGYTMGTVAEMMETGSNDVLVVRNNGKDAFGKQERLIPFLYEQVVKRV
                     DLATKTITVEWDAGF"
     gene            1045..1800
                     /gene="trmD"
                     /locus_tag="PXD18_001245"
     CDS             1045..1800
                     /gene="trmD"
                     /locus_tag="PXD18_001245"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HDL6301684.1"
                     /translation="MWIGIISLFPEMFKAITDFGVTGRAVKQNLLQVECWNPRDFTFD
                     KHKTVDDRPYGGGPGMLMMVQPLRDAIHAAKKAALAVEGGEAKVIYLSPQGRKLDQNG
                     VQTLASNQKLILICGRYEGVDERLIQTEVDEEWSIGDYVLTGGELPAMTLIDAVARFV
                     PGVLGKQASALEDSFAEGLLDCPHYTRPEVLDGMPVPEVLMSGHHEQIRKWRLEQSLE
                     RTWLRRPELLDSLALTDEQRVLLAKIKKQHKIS"
     gene            1827..2177
                     /gene="rplS"
                     /locus_tag="PXD18_001246"
     CDS             1827..2177
                     /gene="rplS"
                     /locus_tag="PXD18_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HDL6301685.1"
                     /translation="MSNIIKQLEQEQLKQDLPSFRPGDTLEVKVWVVEGSKKRLQAFE
                     GVVIAIRNRGLHSAFTLRKVSNGVGVERVFQTHSPVIDSISVKRKGAVRKAKLYYLRE
                     RSGKSARIKERLGD"
     gene            2333..2689
                     /locus_tag="PXD18_001247"
     CDS             2333..2689
                     /locus_tag="PXD18_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301686.1"
                     /translation="MKQLSIRLPDDEFTFIKTFASAHKLTLQNFVMSAIQAKVAEMSA
                     KNKISEESNIHQPLSKDEKIMLNEAKVFYSARSHLKAENVILPSDFMEQIKSGCGAEK
                     MAEMMGYTKEDWESMK"
     gene            2691..3014
                     /locus_tag="PXD18_001248"
     CDS             2691..3014
                     /locus_tag="PXD18_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301687.1"
                     /translation="MGQITFSNIFTKVIFENVLSASTKEKIKQMLFQSVVALPPLHSE
                     RKMILQLKKQKITIFYQVIEEQSVQILAYQFGGTDKLTGVSKAHFKTLDAIFQMTDEE
                     KEGKF"
     gene            complement(3024..3356)
                     /locus_tag="PXD18_001249"
     CDS             complement(3024..3356)
                     /locus_tag="PXD18_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG-like family protein"
                     /protein_id="HDL6301688.1"
                     /translation="MQIEQYQQWVRQFYQQQGWYERSPFMRVTYLAEEIGEVACAVRA
                     IEIGRERPDETEASQQQKRDNLIEELGDVMDNLFVLADKYGISMTEVLERHQAKFEKR
                     YLQKNMEK"
     gene            complement(3449..4645)
                     /locus_tag="PXD18_001250"
     CDS             complement(3449..4645)
                     /locus_tag="PXD18_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDL6301689.1"
                     /translation="MNIPFCLPENISPETFLREYWQKRPLLIRNGLPQIVGLFEPEDI
                     LELALEEEVTARLIQCENEKWSVKSSPLVEEDLEELPVQWSVMVQNLEQWSPELGELW
                     QAFGFIPQWQRDDIMVSCSPLNGTVGKHYDEYDVFLVQGYGQRRWQLGKWCDPSTEFK
                     PNQPIRIFDDMGELVMDEVMNPGDVLYVPSRMAHYGVSESEQGLTFSFGLRYPNATDL
                     LENLCKTIEQQADNINSSEFHLPFRLTPNEQPNALLDPKMVKMFKHQLIDLLQNSEQF
                     DELLTHSVATAASSRRYELLQTDNEYYPDEVQEILEAGGWLQQDANVKILYTENPQRV
                     YVNGEWIDELNEAEMALLIRIANGDSISWNKLASKVQDQAELELMLDTICDWLDSGWI
                     ILSEAE"
     gene            complement(4794..6137)
                     /gene="accC"
                     /locus_tag="PXD18_001251"
     CDS             complement(4794..6137)
                     /gene="accC"
                     /locus_tag="PXD18_001251"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDL6301690.1"
                     /translation="MLEKVVIANRGEIALRILRACKELGIKTVAVHSTADRELKHVKL
                     ADETICIGPAPSVKSYLNIPMIIAAAEVTNADAIHPGYGFLSENANFAEQVEKSGFIF
                     IGPTADVIRLMGDKVSAINAMKKAGVPCVPGSDGPVGNDPKKNKEIAKRIGYPVIIKA
                     SGGGGGRGMRVVHHEKDLEESIAMTKAEAKAAFNNDMVYMEKYLENPRHIEIQVLADT
                     HGNAVYLAERDCSMQRRHQKVVEEAPAQGITPELRQFIGERCANACREIGYRGAGTFE
                     FLYENGEFYFIEMNTRLQVEHPVTEMITGVDLVKEQLRVAAGLPLSITQDDIKVKGHA
                     IECRINAEDPNTFLPSPGKITRLHVPGGLGVRWDSHIYSGYSVPPHYDSMIGKLITFA
                     ENRDIAIRRMENALSETIVEGIKTNIPLHTQILADKEFRKGGTNIHYLEKKLGLK"
     gene            complement(6209..6676)
                     /locus_tag="PXD18_001252"
     CDS             complement(6209..6676)
                     /locus_tag="PXD18_001252"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HDL6301691.1"
                     /translation="MDIRKIKKLIELVEESGITELEVSEEEGTVRISRAAPAVAPAAV
                     QYAAAPVVAPAAPQVASTVPVAAPAEAPKAAETSGHAVLSPMVGTFYRSPSPDAKPFV
                     EVGQTVKIGDTLCIVEAMKMMNRVESDKAGVVKEILVNDGEPVEFDQKLFIIE"
     gene            complement(6929..7711)
                     /locus_tag="PXD18_001253"
     CDS             complement(6929..7711)
                     /locus_tag="PXD18_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HDL6301692.1"
                     /translation="MAVKNEQFIVICNGVFRLFGNIVKILSYPFHALFPKKRFTIPEY
                     SPAKIQSSIPSKITKTIWQTNYSNKVTLPMYANYLFNRLMSLSYDYRYVSTEEREAYI
                     KANADERTFNAYSKLTDGAAQADFWRIFTLLREGGIYIDIDGHLVYPLSKIIGENDSE
                     VLIKRRDKYTNFFLASEAGNWILKDTLELIISNIENRRIEGGVFVMTGPDTLNNAIGD
                     KEVNFRRDKVTCAQGTFTNEYFQYIDKPGSKWNYKKNEDLLK"
     gene            complement(7721..8158)
                     /gene="aroQ"
                     /locus_tag="PXD18_001254"
     CDS             complement(7721..8158)
                     /gene="aroQ"
                     /locus_tag="PXD18_001254"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HDL6301693.1"
                     /translation="MKKILLLNGPNLNMLGKREPQIYGSQTLADIENHLKKLAAAQDV
                     ELESFQANGEEPIINRIHQAFQHTDFIIINPGAFTHTSVAIRDALLSVSIPFVEVHLS
                     NVHSREPFRHHSYLSDIAKGVICGLGAKGYEYALDFAISHLKA"
     gene            complement(8244..8612)
                     /locus_tag="PXD18_001255"
     CDS             complement(8244..8612)
                     /locus_tag="PXD18_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL6301694.1"
                     /translation="MAFTIRKMVEQDTHQVFPLMQKLAVFEHYIDSFAITPEVVMESG
                     FRKSPPDFYCLVAENASNIIGILVYYFLPYTAQNRPAIYMKELYVDETARNQKVGEAL
                     MQALKNEAKAHHCKTIKSLE"
     gene            complement(8672..9496)
                     /gene="dapD"
                     /locus_tag="PXD18_001256"
     CDS             complement(8672..9496)
                     /gene="dapD"
                     /locus_tag="PXD18_001256"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HDL6301695.1"
                     /translation="MSLQAIIEAAFERRAEITPKTVDAETKAAVEEVIAGLDNGSLRV
                     AEKKDGEWVVNQWVKKAVLLSFRIADNEIIDGAETKFYDKVPTKYGNYTEEQFKADGI
                     RAVPGAVVRKGSHIEKNVVLMPSFVNIGAYVGEGTMVDTWVTVGSCAQIGKNVHLSGG
                     VGIGGVLEPLQANPTIIGDNCFIGARSEIVEGVIVEDNCVISMGVFIGQSTKIYDRET
                     GEVHYGRVPAGSVVVSGSLPSKDGSHNLYCAVIVKKVDEKTLSKVGLNDLLRSIDE"
     gene            9644..10306
                     /locus_tag="PXD18_001257"
     CDS             9644..10306
                     /locus_tag="PXD18_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HDL6301696.1"
                     /translation="MENFANLLTGKTREHLVPLPNALSDKHYLQPQVVEAFLTLQHAA
                     KQAGFNLQPASTFRDFERQKGIWNAKFRGERKVHDDNGVAIDMAALSDLEKCKAMLRW
                     SAVPGASRHHWGTEIDIFDPDLLPENTPLLLEPWEYLEGGYFADLTKWLHVNAETFGF
                     YFPFDGKHSRVGFEPWHISYRPISNEYEQRFNDEILKAAWQDEEVAGKECLLEHFEEL
                     LK"
     gene            10303..11055
                     /locus_tag="PXD18_001258"
     CDS             10303..11055
                     /locus_tag="PXD18_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL6301697.1"
                     /translation="MIQLINETQQHDKFRQICDKWQLVEDKSSPLALVLTEERLELRK
                     LDEPKLGAIAVNFVDGTMAHRRKFGGGRGEAVAKAVGIKGDYLPTVIDATAGLGRDAF
                     VLAAVGCKVLLVERNPIVAALLEDGLNRAYQDVEIGSFMQERMILADVRDISQLDPQS
                     QMAEVVYLDPMYPHKQKSALVKKEMRVFQHLVGADLDSDSFFLPAKGLAKKRVVVKRP
                     DYAPFLAEQKPDFSHTTKNHRFDVYLSHLKND"
     gene            11146..11982
                     /gene="ftsN"
                     /locus_tag="PXD18_001259"
     CDS             11146..11982
                     /gene="ftsN"
                     /locus_tag="PXD18_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HDL6301698.1"
                     /translation="MPQRDYVARSNEKKSKKNQKESNVKKILMRIIGVILFFGIGLWF
                     LKSSAPVPTVPSAPQPANSQTKSELPSRPEETWSYIRDLETRTVITDNSQTSQERLAQ
                     LTAEQKQQIEERRKQEEARLAAEQAQQKPATDVSATELAPKTEEVKSLTEEELAAKKA
                     QEQALAQKQAEEKRRQAELKKQQEAKKEQPAKIVASAATLADKAANQAGKFGLQCGAF
                     KNKAQAENMQARLAMAGFNARIASSADWNRVFVGPIGDRAATSRAQSNARSVAECVIV
                     AM"
     gene            complement(12024..13205)
                     /locus_tag="PXD18_001260"
     CDS             complement(12024..13205)
                     /locus_tag="PXD18_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HDL6301699.1"
                     /translation="MKTELDMIVIGGGMIGAATALGLAKQGLRLALLEKNPLPTFNPD
                     SDYDLRISAISMGSIQLLEKLGVWEQIVAMRSTPYTQLETWEIDGFNTLFSAADLGLE
                     KLGDMVENNVIQIALWEQLKQYPNCLQAVGFEQIFANKAGEYWEVTVDGNTFAAPLLI
                     AADGANSQVRQWAGIGLTAWQYRQHCLLATVTTEKPAPSGTWQQFYPTGPRAFLPLSG
                     NHGCVVWYDSPQKIAELKMLPAEKLGVAIEQHFPSRLNAELGNIQVQASGAFPLTRQH
                     AQHYVQNGVVLVGDAAHTINPLAGQGVNLGFKDVKTLLEVIEQAVKKGKNFASEQVLQ
                     RYEQKRKPDNLLMQTGMDVFYKAFKTDLLPLKIARNVGLVLADKVSPIKKQALKYAIG
                     I"
     gene            13312..13650
                     /locus_tag="PXD18_001261"
     CDS             13312..13650
                     /locus_tag="PXD18_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301700.1"
                     /translation="MSCKTHANHEHEHGEGCGHTAIKHNDHIDYLHDGHLHHNKHGDH
                     YDEHVLEVNETNPADCNAAHCCGDHVHGEVCGHEAVPHGDHIDYIVNGRLHHQHGDHC
                     DDHGPVEIVK"
     gene            13782..14651
                     /locus_tag="PXD18_001262"
     CDS             13782..14651
                     /locus_tag="PXD18_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HDL6301701.1"
                     /translation="MTLAIVYSRASIGVEAPLVTIEVHISNGQPKLTIVGLPEATVKE
                     AGDRVRSALLNANFIYPPQRITINLAPADLPKEGGRFDLPIAIGILAASGQIDSDLLT
                     QFEFLGELALTGHLRGVHGTIPAVISADKAKRQMILAKQNANEASLVSNATTYFAGSL
                     LEVVNMLNKRDKLPICQHISQHSAEIRPLVSRDLTDIIGQQHAKRALMIAAAGQHNLL
                     FLGPPGTGKTMLASRLADLLPEMTDEEAIETASVTSLVQNELNFQNWKQRPFRSPHHS
                     ASMVALVGGGCEN"
     gene            14743..16554
                     /locus_tag="PXD18_001263"
     CDS             14743..16554
                     /locus_tag="PXD18_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301702.1"
                     /translation="MFYLNNDNFKREPYRGYCPSHLEKLFTKPHLDIRGNGYYYPDNE
                     YVVAWYESDFIFKSRKAQAHAKVKLVNLTCPKYTGKNSAEYLSVLYISVPLNYLHYFT
                     IGSIWKGGVAKEQFALEEFYITVEAENQDGKRENLSIVSFGESEENGLEKPFDYTIYT
                     IPTEYHNYGDDLNRLLSISYQNQKFIIHPLHIFMMHYGYSTDIKRILATYPLDEVRER
                     LFIDKVVENFDVERYVVLPKYFVKKDAIFLYHFKYDEETTGTRVKKLVSQFRLNIHNQ
                     THPIEIDFWHTQKVELKIRGVRLGNAVLCAEIIGLNQPEGEDITLVLSQSKREKSGNK
                     TEEQNNEVNNVPITRVYTREPELDELPLTDNSPDNRTVEYNKRQFELLGRQRQIRALK
                     KAREESNQKMKALTPDEIDSLGVGESDGRNGKVGLAFCFLDDTPVGKSSKLYKLWQHA
                     KAVAEWNHGEAHWYTPNLGFRNDDELLPVSLETNKCFDYPEIAIIIRLQIYGETFFLI
                     DFSMKQRDISIRGLGYKPDPNEDFLYESDMSKSELSELLSAVHHHEHLPKEYIEKKNK
                     EKTKLTTFNHSEAESSNWAYNAVQKLTSRAITKPTYF"
     gene            16563..19343
                     /locus_tag="PXD18_001264"
     CDS             16563..19343
                     /locus_tag="PXD18_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HDL6301703.1"
                     /translation="MNAEQRVIVTPTFWGKFFGKIKSVELQQNKVIVTDKKNNITEHD
                     LGKTFDFPAIQKSFFGTKLFFKDDSTEVVLSKLAKKQTDSLLLEIEKVVASNIKVKVK
                     EGFQHFANLAENQYLRDSDIPTLNDRVRLSVLSYGDNKEHFQKYFDESLVKKIQYISS
                     LFPVNAINAQTIRREYEQHVLNHRKHFFDVIESNPLTEQQRLSVIRNNDINMVLAAAG
                     TGKTSVMVAKALDLIDSGACKSEDILILAYNRDAATELSERLQERAREANLDLENSPS
                     ISTFHALGRRIIKECGKSVHLSKFAEDPMKLDRWFNKWLEDYIKEDPDNLAKFIQLAY
                     QPIDPFQFKTKDEYDRYVNDNDYRTLQGERVRGYQELLIANWLFSHSVEYEYEPRYVS
                     KRRIEIGFDYKPDFSLGDGVYLEHFGIDRQGRTRADINAQEYNANIQRKRELHAEHNT
                     TLLETYHYNWVENTLYKRLEQLMNEQFIPLKPKSQQEILDALNESGIFKENKNRYLKC
                     LQAIRTERLDYQQILKRLTDAKIVYAKEYATLLMRIHDAYVKELRSANEIDFDDMILL
                     ATQLVKTGEFKPKWKHILVDEFQDISMARLELLKEIYTKGPRPIWTVVGDDWQSIYRF
                     SGGKLEVTTRFNDMVGSHTLSKLEKTYRYNNSIADTAGQFIMQNPEQYQKNVVTHTKV
                     ADSCVHLYDSHVVKDEKSEANISLKASAILKLIRQKAPEATVAILARYRYLLEDAKSV
                     IKDKNVKFWTFHGSKGLEADYCILLGFFQGKVGFPNQNKEEAVVEALLPMLDSFPHSE
                     ERRLFYVALTRAKKESYLIADANAPSEFINELLSPKYKIDIVSKRFQERYRTIFKCNE
                     CSTGYFVMKQGKFGQFYSCTSGEVCRSSPRICEKCGRPMKLREGKFGQFWGCSGYGIK
                     GDQCTNTRKYFM"
     gene            19365..>20040
                     /locus_tag="PXD18_001265"
     CDS             19365..>20040
                     /locus_tag="PXD18_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL6301704.1"
                     /translation="MDLFESKKQLIELIKKYDSDKEIYSSSSYNESQLRTDFLDPFFG
                     LLGWDITNSKNKLTSEREVIVEEPLKEKVSENVKKPDYTFRFNSQRKFFVEAKKPSVK
                     IKTDPLPAHQVRRYGFTAKLSISVLSNFEYLAIYDCSEIVDVQQDALYARVRLYHYTE
                     YVKFFDEIMNLLGRESVYSGHFDNEWREISQKIENSKQTVDELFFEQINKWRHVLGSE
                     LLKINPC"
BASE COUNT         6071 a         4012 c         4239 g         5718 t
ORIGIN      
        1 ttttattagt aatttgtata aaaaaacgct aaatgtatct ttctttaaaa gagtcatatc
       61 aatgaatctc ccttgtcttt ccgcaaaaaa tctgtataat ttgaccgctt gttttctctt
      121 ttgaaacaag ttcgttaccc tcacctcgaa cgagggttta ttttttacta tcaacattta
      181 gaggaaaggt tatggtaacc attcgtttaa ctcgtggcgg agctaaaaaa cgcccatttt
      241 accaaatcgt ggtagtggac agccgttcac ctcgtgatgg tcgctttatc gagcgtatcg
      301 gtttcttcaa cccattagca gcaggtcaag ctgagcgttt acgcttagat gtggctaaag
      361 tagatgcttg ggttgctaaa ggtgctgatt tatcagaccg tgttgcttct ttagtaaaag
      421 aagctcgcaa agcagcttaa tttttaagcc aaaattaaat aagtaggtga gtatgagcga
      481 acaaaagatc gaagttgtcg gaaaattagg ttcaacctat ggtatccgtg gttggttgcg
      541 tctctattca tcgacagaac aaactgagag cattttcgac taccagccgt ggtttttaaa
      601 aattaaaggt cagtggcagc aggtcgaatt agaaagctgg cgttatcata gcaatgattt
      661 gattgttaaa ttgaaaggca ctgaagaccg tgaagccgca cagttattaa ccaacgctga
      721 aattggcgtg gatttgtctg tgtttcctga attggaagag ggagattact attggcacga
      781 tttgatcggc tgttcggtag taaacttaga gggctacaca atgggaacag ttgccgaaat
      841 gatggaaaca ggttcaaatg atgtgcttgt ggtgcgtaat aacggcaaag atgctttcgg
      901 taaacaagaa cgattaattc cgtttttgta tgaacaagta gttaaaagag tagatctcgc
      961 caccaaaacc attacggtgg agtgggacgc tggtttctaa cctcaggtat gcggtgagct
     1021 ttggaaaaca tttaaggcgt taaaatgtgg attggtatta tttcactgtt tcctgaaatg
     1081 tttaaagcaa ttaccgattt cggggtgaca ggacgtgcag ttaaacaaaa tctactgcaa
     1141 gttgaatgtt ggaatcctcg tgattttaca ttcgataaac ataaaactgt agatgatcgc
     1201 ccttatggcg gtggtccggg aatgttgatg atggtgcaac ctttgcgtga tgcgattcac
     1261 gcagcgaaaa aggcggcatt agcagtagaa ggcggtgaag ctaaagtgat ttatctttcg
     1321 ccgcaaggac gtaaactcga tcaaaacggt gtgcaaacac tggcttcaaa tcagaaactg
     1381 attttaattt gtggacgata tgaaggcgtg gacgagcgat tgattcaaac agaagttgat
     1441 gaagaatggt caatcggtga ttacgttctc acaggggggg aattacctgc aatgacatta
     1501 attgatgcag ttgcaaggtt tgttcccggg gtattaggca aacaggcttc cgcgttagag
     1561 gattctttcg cagagggatt attagattgc ccacattata cccgccctga agtattagac
     1621 ggtatgcctg ttccggaagt gctgatgtct ggacaccatg aacaaattcg taaatggcgg
     1681 ttggaacaat cgctggaacg aacgtggtta agacgccctg agctattgga tagcctagct
     1741 ctgactgacg aacagcgtgt gttgttagct aaaattaaaa aacagcacaa aatcagttaa
     1801 ttctaggatt atagaaggtt tttaaaatga gtaacatcat caaacaactt gaacaagaac
     1861 agttaaaaca agacttacct agcttccgtc cgggtgacac attagaagtt aaggtatggg
     1921 tagtagaagg tagtaaaaaa cgtttgcaag cgttcgaagg cgtggttatt gcaattcgta
     1981 accgtggctt gcactctgca ttcactctac gtaaagtttc aaatggcgta ggcgttgagc
     2041 gtgtattcca aactcactca cctgtaattg acagcatttc tgttaaacgt aaaggtgcgg
     2101 tacgtaaagc taaactttac tacttacgtg agcgttctgg taaatctgca cgtatcaaag
     2161 agcgtcttgg cgactaattg ctacaaaaca gtgaaatgca caaaagcctt gaggaaactc
     2221 aaggcttttg ctttttgtac ttacaagcag ttatttttcc tcaatgattt acaaatcttg
     2281 ctttcttttt tgttataatg ttaacaagat aacattaatg ataggtgtcg atatgaaaca
     2341 attaagtatt agattgccag acgatgaatt tacttttatt aaaacatttg cttctgctca
     2401 taaactgact ttacaaaatt ttgtgatgtc cgcaatccaa gctaaagttg cagaaatgtc
     2461 tgctaaaaat aaaatatctg aagaaagtaa cattcatcaa cctctttcta aagatgaaaa
     2521 aataatgcta aatgaggcaa aagtatttta ttctgctcgt tcgcatttaa aggcagaaaa
     2581 tgtgattctt ccgagtgatt ttatggagca aattaaatca ggctgtggag cagaaaaaat
     2641 ggcagaaatg atgggatata ccaaagaaga ttgggagtca atgaagtaat atggggcaga
     2701 ttacatttag taatattttc acaaaagtga tttttgagaa tgtgctttct gcttcaacta
     2761 aagagaaaat aaaacaaatg ctttttcagt ctgtggttgc attacctcct ctccattcag
     2821 aaagaaaaat gattttacag ttgaaaaagc aaaaaattac cattttttat caagttattg
     2881 aggaacaatc tgtgcaaatc ctcgcttatc aatttggtgg aactgataaa ttgacaggtg
     2941 tgtctaaagc tcactttaaa acactagatg ccatttttca aatgacggat gaagagaaag
     3001 aaggaaaatt ctaatgtaag cggttatttt tccatatttt tttgcaaata acgtttctca
     3061 aattttgctt gatggcgttc aagcacttcc gtcatcgaaa tgccatattt atcggctaat
     3121 acaaaaagat tatccatcac atcgcctaac tcttcgatta agttatctcg tttttgctgt
     3181 tgtgaagctt cggtttcgtc cggtcgttca cgcccgattt caatcgctct tactgcacaa
     3241 gccacttcgc cgatttcttc tgctagataa gtcacccgca taaaagggct tcgttcatac
     3301 caaccttgtt gttggtaaaa ctggcgaacc cattgttgat attgttcaat ttgcatttta
     3361 tttctgattc aaaaagtagg gacgaaaaat ttttcgccct tttataagaa aatgtatcag
     3421 ggcaaatgat gatttgcccc taggagtgtt actctgcctc agagagaata atccagccac
     3481 tatccagcca gtcgcaaatg gtgtctagca ttagctccag ctccgcttgg tcttgcactt
     3541 tggaggcaag tttgttccac gaaatcgaat ctccattggc gatacgaatc agtaatgcca
     3601 tttctgcttc gtttaactca tcaatccact cgccatttac ataaacccgt tgagggttct
     3661 cggtgtagag gatttttaca tttgcatctt gctgtaacca gccgccggct tcgagaattt
     3721 cttgcacttc gtcagggtaa tattcattgt cagtttgcaa taattcataa cggcgggagc
     3781 ttgccgcagt ggcaacactg tgagtgagta actcatcgaa ctgttcggaa ttttggagca
     3841 agtcgattaa ctgatgttta aacattttca ccattttcgg atcaagcaac gcattcggct
     3901 gttcattcgg cgttaagcgg aacggaagat gaaattccga tgaattaatg ttgtcggctt
     3961 gttgttcgat ggttttgcag agattttcca gtaaatcggt cgcatttgga taacgtaaac
     4021 caaaagagaa agttaaacct tgctcgcttt cggaaacacc atagtgagcc attcgagacg
     4081 gcacataaag cacatcaccc gggttcatta cctcgtccat taccagttcg cccatatcat
     4141 caaaaatgcg gatcggttgg tttggtttga attcggtgct tggatcgcac catttgccta
     4201 attgccaacg acgttgccca tagccttgca ccaagaacac atcgtactca tcataatgtt
     4261 tgccgacagt gccgttgagc ggtgagcaag aaaccataat gtcatcacgt tgccattgcg
     4321 ggataaaacc aaaagcctgc caaagctcgc ctagctcagg agaccattgc tcgaggtttt
     4381 gcaccattac agaccattgt acaggtaact cttccaaatc ttcctcaaca agcgggctgg
     4441 atttaacaga ccatttctcg ttttcgcatt gaatcaggcg tgcagtgact tcttcctcta
     4501 atgccagttc taaaatatct tccggctcaa acaatccgac aatttggggt aagccgttac
     4561 gaattaatag cggtcgtttt tgccaatatt ctcgcaaaaa ggtttcaggg ctgatatttt
     4621 caggtaagca gaatggaatg ttcataatgg ctccttgcta cgtgcttctt tgagattact
     4681 gatattctac ccgagaaatc aggaaaaacg ggaaattttt tatgatttag cgacatcatt
     4741 cacattttga agaggaaata atgaaaaagg cgaacattgt tcgcctttga aatttatttt
     4801 aaaccgagtt ttttctcgag atagtggata ttggtgccac ctttgcggaa ttctttatcc
     4861 gcaagaattt gagtatgtaa aggaatattg gttttaatgc cttccacaat ggtttcggaa
     4921 agggcatttt ccatccggcg aatcgcaata tcacgatttt cagcaaaggt aatcaattta
     4981 ccaatcattg aatcgtaatg tggcggcacg ctatagcctg agtaaatatg tgaatcccaa
     5041 cgcacaccta aaccacccgg aacgtgtaaa cgggtaattt tacccggcga tggcaagaag
     5101 gtgtttggat cttctgcgtt gatacggcac tcaatggcgt gacctttcac tttaatatca
     5161 tcttgtgtga tcgaaagtgg taagccggct gccacacgca gttgctcttt taccaagtcc
     5221 acaccggtaa tcatttcggt tacagggtgt tctacctgta agcgggtgtt catttcaatg
     5281 aagtaaaact cgccgttttc atataagaac tcaaaagtac ctgcaccacg gtagccaatt
     5341 tcacggcagg cattggcaca acgctcccca ataaattgac gcaattcagg tgtaataccc
     5401 tgagcaggtg cttcttccac cactttttgg tggcgacgtt gcattgaaca gtcacgctct
     5461 gctaaataaa ccgcattacc gtgagtatcg gcaagtactt ggatttcaat atggcgtgga
     5521 ttttctaaat atttctccat atacaccata tcgttattaa atgccgcttt cgcttcggct
     5581 ttcgtcattg cgatagattc ttccaaatct ttctcgtgat gaaccacacg cataccacga
     5641 ccgccaccac cacctgatgc tttgatgatc accgggtagc cgatacgttt agcgatttct
     5701 ttatttttct tcggatcgtt accaaccgga ccgtcagaac ccggtacgca aggcacgccg
     5761 gcttttttca ttgcattgat agcagagact ttatcgccca ttaagcgaat cacatcagcc
     5821 gttggaccaa taaagataaa gcctgatttc tcaacttgtt cggcaaagtt tgcgttttca
     5881 gataagaaac cgtagcccgg atgaatagca tcggcattcg ttacttcggc agcggcaata
     5941 atcatcggga tatttaaata gctttttacc gatggagcag gaccgataca aatggtttca
     6001 tcggctaatt taacgtgttt taattcacgg tcggcagttg aatgcactgc aaccgtttta
     6061 atgcccaatt ctttacaagc acgcaaaata cgcagggcaa tttcaccacg gtttgcgata
     6121 acaacttttt ctaacatagg gaaattcctt gtgttctaga aaatgtaggg cgtgttgcac
     6181 acgcccgttg gataatttaa ggaagagctt attcaatgat gaataatttt tggtcgaatt
     6241 ctaccggttc gccatcatta actaagattt cttttaccac accggctttg tctgactcga
     6301 cacggttcat cattttcatt gcttctacaa tacataacgt atcaccgatt ttcacggttt
     6361 gacccacttc aacgaacggt tttgcatctg ggcttgggct acggtagaaa gtccccacca
     6421 ttggtgaaag cactgcgtgg ccactcgttt ctgcggcttt tggtgcttca gccggagctg
     6481 caacaggtac tgtcgaagct acttgaggtg ccgctggtgc aacaacagga gctgctgcat
     6541 attgaactgc agctggtgca acagctggag cagcacggct aatacgcacc gtaccttctt
     6601 cttcagacac ttctaactcg gtaatgccag attcttcaac taattcaata agttttttga
     6661 ttttgcgaat atccataata agattccgta tgtgattaaa taaaataaaa aagagaactc
     6721 cacatttggg gtataaattc aaatgtagag ttaaaaaatg ctgggcgtag aatacctgaa
     6781 tttcgctaat tttgcgaata aaatctgata attttggcga aaatggacga ttttagcatt
     6841 catcgtacca gttaggattt ttggaaaatg gtgactcaca agcgattgaa aattgccaat
     6901 tttttgtaaa aaacaaccgc ttgtcagatt atttcaataa atcttcattt ttcttgtaat
     6961 tccacttgct accgggcttg tcgatatact gaaaatattc gttggtaaaa gtaccttgag
     7021 cacaagttac tttgtctcgg cggaaattta cttctttatc accaatggca ttatttaggg
     7081 tgtcaggacc ggtcataaca aacacgccac cttcaatccg acgattctca atattgctga
     7141 taatcagctc aagggtgtct tttagaatcc aatttccagc ttccgaagcc aagaaaaagt
     7201 tggtgtattt atcacggcgt ttaattaaca cttcgctatc attttcgcca ataattttag
     7261 agagtgggta aaccaaatgc ccgtcaatat caatataaat gccaccttct cggagcaaag
     7321 taaaaattcg ccaaaaatca gcttgtgccg caccatcggt taatttgcta taggcgttaa
     7381 aggtgcgttc atcggcgttg gccttgatgt atgcctctcg ttcttctgtg ctaacgtagc
     7441 gataatcgta gctcaatgac attaggcggt taaacagata attcgcatac attggcaagg
     7501 tgactttgtt agaataattc gtttgccaaa tggttttggt aattttgctc ggaatgcttg
     7561 attggatttt tgccgggcta tattccggaa tggtgaaacg ttttttcgga aaaagtgcat
     7621 ggaacggata actcaatatt ttgacgatat taccgaataa acggaagact ccgttacaga
     7681 tcacaataaa ttgttcattt ttaacagcca ttttattacc ttatgctttt aagtgtgaaa
     7741 ttgcaaaatc caacgcatat tcatagcctt ttgcccctaa accgcaaata acgccttttg
     7801 caatatcact tagataggag tgatggcgaa aaggttcacg gctatgaacg ttagacaaat
     7861 gcacctcaac aaacggaatc gacacactca ataacgcatc acgaattgcc acgctggtgt
     7921 gagtaaatgc cccggggtta ataataataa aatcggtatg ctgaaaggct tggtgaatac
     7981 ggttgataat cggctcttca ccgttggctt gaaagctctc cagctcaaca tcttgggccg
     8041 cagccaattt ttttaagtgg ttttcaatat ccgccaaagt ttgcgaaccg taaatttgtg
     8101 gctcacgttt gcccaacata tttaaattcg ggccgttaag gagaaggatt tttttcatat
     8161 ttacttattc aacttgtaat tcataattaa gccattcacg gttttctttc gcccccaagc
     8221 gttgataaaa acgaatacca ccgtcattcc aaggatttta ttgtcttaca atgatgtgcc
     8281 ttcgcctcat ttttcaaggc ttgcattaac gcctctccca ctttctgatt ccgagcagtt
     8341 tcatcaacat aaagctcttt catataaata gcggggcggt tttgggcagt gtaaggaaga
     8401 aaataataaa ccaatatgcc gataatgtta gacgcatttt cagccactaa acagtaaaaa
     8461 tcgggtgggc ttttgcgaaa gccggattcc attacaactt caggagtaat cgcaaaagaa
     8521 tcgatatagt gctcaaacac agccagtttt tgcatcagag ggaacacttg gtgggtatct
     8581 tgttcgacca ttttgcggat tgtaaatgcc ataaaattcc ttacaagcgg taaaaaaatc
     8641 cctcactttt gcaaagcgag ggaggtttta attattcgtc aatagaacgt aataagtcgt
     8701 ttaagcccac tttgcttaag gttttctcat ccactttttt cacaatcacc gcacagtaga
     8761 ggttgtgtga accatctttt gatggaagcg agcctgaaac cacaacagag cctgccggca
     8821 cacggccgta atgtacttcg ccggtttcac ggtcgtaaat tttggtagat tgaccgataa
     8881 acacgcccat tgagatcacg cagttatctt cgacaatcac gccttctacg atttcagaac
     8941 gtgcaccgat aaagcagttg tcgccgatga tggttgggtt cgcttgtaat ggctctaaca
     9001 caccaccgat gcccacgcca ccagaaaggt gaacattttt accgatttgc gcacaagaac
     9061 ccactgttac ccaagtgtcc accattgtgc cttcgccaac gtatgcaccg atgttcacga
     9121 aagatggcat taacaccacg tttttctcga tatgtgaacc tttacgcacc accgcacccg
     9181 gcacggcacg aatgccatct gctttgaatt gctcttcggt gtagttgccg tatttggttg
     9241 gcactttgtc gtagaatttg gtttctgcac cgtcgatgat ttcattgtcg gcaatacgga
     9301 atgaaagtaa taccgctttt ttcacccatt ggtttactac ccactcgcca tcttttttct
     9361 cggcaacacg cagtgaaccg ttgtctaatc ctgcgatcac ctcttctact gctgctttgg
     9421 tttcagcatc aacggttttc ggagtaattt ccgcacggcg ttcaaatgcc gcttcaataa
     9481 tagcttgtaa agacattgtt gtgttccttc aatatataaa ttaaaacaga aaattcggct
     9541 cactttttaa catagaaagg cgtttatttc cacaagaaaa aacatatcgc agaaatttag
     9601 tttataattc caagccactt atttgataca agcggtgatt tttgtggaaa attttgcaaa
     9661 tctgcttacc ggtaaaacgc gtgagcattt agtgccgttg ccgaacgctc tttcggataa
     9721 acattacctt cagcctcagg tggttgaggc ttttttgacg ttgcagcatg ctgcaaaaca
     9781 agccggcttt aatttacagc ctgccagtac ttttcgtgat tttgaacgcc aaaaagggat
     9841 ttggaatgcg aagtttaggg gtgagcgtaa ggttcacgat gataacgggg ttgcgattga
     9901 tatggcggcg ttatcggatc ttgaaaagtg caaagcaatg ttgagatggt ctgcggtgcc
     9961 gggggcaagt cggcatcatt ggggaacgga aattgatatt tttgaccctg atttattgcc
    10021 ggaaaatacg cctttattgc ttgagccgtg ggaatatttg gaaggtggct attttgccga
    10081 tttaaccaag tggttacacg ttaatgcgga aacatttggc ttttatttcc cgtttgacgg
    10141 taaacattct cgagtgggct ttgagccgtg gcacattagc tatcgcccga tttcaaatga
    10201 atatgagcaa cgctttaacg atgaaatctt aaaagctgcg tggcaagatg aagaagtggc
    10261 gggtaaggaa tgcttacttg aacattttga agaattacta aaatgatcca attaattaac
    10321 gaaacccaac aacacgacaa attccgccaa atttgcgaca aatggcagct ggttgaagat
    10381 aaatccagcc cgttagcctt agtgctaacg gaggaacgat tggaactacg caaattagac
    10441 gaacccaagc tcggggcgat tgcagtgaat tttgtggacg gtacgatggc acatcggcgt
    10501 aaattcggtg gtgggcgagg tgaagccgtt gcgaaagcgg tcggcattaa aggggattat
    10561 ttgccaactg tgattgatgc gacagccggt ttagggcgag atgcttttgt attagcagcg
    10621 gttggttgta aagtgctgtt agtggaacgc aatccaattg tcgctgcctt gttggaagat
    10681 ggtttaaacc gagcttatca agatgtggaa atcggcagtt ttatgcaaga aagaatgatc
    10741 ttagccgatg ttcgagacat ttctcagcta gatccacaat cccaaatggc tgaggtagtg
    10801 tatttagatc cgatgtatcc gcacaaacaa aaaagtgcgt tggtgaaaaa agaaatgcgg
    10861 gtgtttcaac atttagttgg ggcagattta gattcggaca gctttttctt accggcaaaa
    10921 ggattggcaa aaaaacgtgt ggtagtgaag cgtccggact atgccccgtt tttagcggag
    10981 caaaagcctg atttttcaca caccaccaaa aatcaccgtt ttgatgttta tctttctcac
    11041 ctgaaaaatg attaaaggtg ggtcatgcga taggcaagcg gttattttta cagtaaaatt
    11101 tacaaattat gttatcgttt atttatattt aaaaaggcgg ttatcgtgcc acaacgtgat
    11161 tatgtcgctc gttccaacga gaaaaaaagt aaaaaaaatc aaaaagaaag taatgttaaa
    11221 aagattttaa tgcggattat cggggtaatt ttattcttcg gtattggttt atggtttttg
    11281 aaatccagtg cacctgtacc aacagttccg tcagcaccgc agcctgctaa ttcacagact
    11341 aaaagcgaat taccaagtcg accggaagag acgtggagct atattcgtga tttagaaacc
    11401 cgtacggtaa ttaccgataa tagccaaact tcacaagaac gtttggcaca attaacggcg
    11461 gaacaaaagc agcaaattga agaaagacgc aaacaagaag aagcacgctt agccgctgag
    11521 caagctcaac aaaagcctgc gaccgatgta tctgctacag aattggctcc gaaaacagag
    11581 gaagttaagt cgttaacgga agaagaatta gcagcaaaaa aagcacagga gcaagcttta
    11641 gcacaaaagc aagcggaaga gaaacgcaga caagcagagc ttaaaaaaca gcaggaagcg
    11701 aaaaaagagc agccggctaa aattgtagca agtgctgcaa cactggcaga taaagctgca
    11761 aatcaggcgg gtaaatttgg gttacagtgc ggtgcattta aaaataaagc ccaagccgaa
    11821 aatatgcaag caagattggc aatggcaggt tttaacgccc gtatcgcaag cagtgccgat
    11881 tggaaccgtg tttttgtcgg cccgataggt gacagagcgg caacttccag agctcaatcc
    11941 aatgcacgca gtgtagcgga atgtgtgatt gtggcgatgt aaaattgatt gaaatattga
    12001 agagagctat aggctctctt tttttatatc ccaatcgcat atttcaaggc ttgctttttg
    12061 atgggtgaca ctttatcagc caatactaaa ccgacattgc gggcaatttt gagcggtaat
    12121 aaatcggtct taaacgcttt ataaaacacg tccatgcctg tttgcatcag taaattatcc
    12181 ggtttacgtt tttgctcata gcgttgaagc acctgctcac ttgcaaaatt tttgcctttt
    12241 ttgaccgctt gttcgatcac ctcaagcaag gttttaacat ctttaaagcc taaatttaca
    12301 ccttgtccgg caagcggatt aatggtgtga gccgcatcgc cgactaatac caccccgttt
    12361 tgcacatagt gctgagcgtg ctggcgggtt agcgggaaag cccctgaagc ctgcacctga
    12421 atgttgccta attctgcgtt gagccggctt gggaaatgtt gctcaatcgc aactcccagc
    12481 ttttctgctg gaagcatttt cagttcggca attttttgtg gtgaatcgta ccaaacaacg
    12541 cagccgtgat tgccggaaag cggtaaaaag gctcgagggc cggttggata gaattgttgc
    12601 caagtgccgc ttggagcagg tttttcggtg gtaacggtgg cgagtaaaca gtgttggcga
    12661 tattgccaag cggttaaacc aatgcccgcc cattggcgaa cctgtgaatt tgcaccgtct
    12721 gcggcaatca gcagtggggc agcaaaggtg ttgccatcaa ccgtcacttc ccaatactcg
    12781 cccgctttat ttgcaaaaat ttgctcaaat ccgaccgctt gtaggcagtt tggatattgc
    12841 tttaattgct cccataacgc aatttgaata acgttgtttt cgaccatatc gccgagcttt
    12901 tccaaaccca aatcagctgc cgaaaaaaga gtgttgaatc catcaatttc ccaggtttcg
    12961 agctgggtat aaggggtgct tctcattgca acaatttgct cccacacgcc caatttttct
    13021 aacagttgaa tcgagcccat actaatggcg gaaattcgca aatcgtagtc tgaatcagga
    13081 ttaaaggtcg gcagagggtt tttctccaac aaggctaaac gcagcccctg ttttgctaag
    13141 cctagagctg ttgctgcccc aatcataccg ccaccgatta caatcatatc taattcagtt
    13201 ttcatttttt cttccttttt agttaggcaa aatactgcta aaacgccttg aattgtagtg
    13261 catttcagat taggatcaaa ccgatttatc tatttatcta aggagcgttt tatgtcttgc
    13321 aaaactcatg caaaccacga gcacgaacac ggcgaaggct gtggtcatac tgctattaaa
    13381 cataacgacc atatcgacta tttacacgat gggcatttac accacaacaa acacggcgat
    13441 cactatgacg aacacgtttt agaagtgaat gaaaccaacc cggcagactg taatgccgcc
    13501 cattgctgcg gcgaccacgt tcatggtgag gtttgcggac acgaagctgt gccgcacggc
    13561 gatcatatcg actacatcgt gaatgggcgt ttgcaccacc aacacggcga ccactgcgat
    13621 gaccacgggc cggttgaaat tgtgaaataa gatttttgat gggaggtttt agcctcccat
    13681 tattattttt gcgatctcgc tcgaaaaatt gaacattcct gctacccctc ttccgatttt
    13741 ccttttatgc tctcggtatt gatttctaat accgaaatgt gatgacctta gcgattgttt
    13801 acagccgagc ctccattggc gttgaagccc cgttggtgac gattgaagtg catattagca
    13861 acggacaacc aaaattaacc attgtcggct tgcccgaagc cacagtgaaa gaggctggtg
    13921 atcgtgtgcg gagtgcgttg ctgaacgcta attttatcta cccgccacaa cggatcacga
    13981 ttaatcttgc tccggcagat ttacccaaag aaggcggacg ttttgacttg ccgattgcga
    14041 ttggcattct ggcagcctca gggcaaattg attctgattt attaacgcag ttcgagtttt
    14101 tgggcgagtt ggcactgaca gggcatttgc gaggagtgca cggcacgatt ccggcagtga
    14161 tttctgccga taaagccaaa cggcagatga tcttagccaa gcaaaatgcg aatgaggcat
    14221 cgcttgtttc caatgccacc acctactttg ccggctcgtt gttggaggtg gtaaatatgc
    14281 tcaacaaacg ggataaactg ccgatttgtc agcacatttc gcaacattct gccgaaattc
    14341 gaccgcttgt cagccgagat cttactgata ttatcgggca acaacacgcc aagcgagcct
    14401 taatgattgc cgctgccggg caacataatt tgctgtttct cggaccaccg ggaacgggta
    14461 aaacaatgtt ggcaagccgg ctggcggatt tactgccgga aatgaccgat gaggaggcga
    14521 ttgaaaccgc ctcggtgacc agccttgtgc aaaatgagct gaattttcag aactggaaac
    14581 aacgcccgtt tcgttcgccc catcacagtg catcaatggt ggcattagtg ggaggtggct
    14641 gtgaaaacta gaaataaatg tcaaaaacaa gaaataaatg tcacaaatct ttctctaatt
    14701 tcgctataat tcgatcatca aaactttaag gggaaatccg ttatgttcta cctcaataac
    14761 gacaatttca aacgagaacc ttatcgtgga tattgtccga gtcaccttga aaagcttttt
    14821 actaaaccac accttgatat tagaggtaac ggttattatt accctgacaa tgaatatgtt
    14881 gtagcttggt atgaatcgga cttcattttc aaatcaagaa aagctcaagc acatgcaaaa
    14941 gtaaagcttg ttaatttaac ttgccccaaa tacactggca aaaacagtgc tgaatattta
    15001 agcgttttgt atatctccgt tccccttaat tatctacatt atttcactat cggcagtatc
    15061 tggaaaggcg gtgtcgccaa agagcagttt gctctcgaag aattttacat tacggttgaa
    15121 gctgaaaatc aagatggtaa acgagaaaac ctctcaatcg tttcattcgg tgagagtgag
    15181 gaaaacggtt tagagaaacc atttgattac acaatctaca ctatccccac agaatatcac
    15241 aactacggtg atgacctaaa ccgactactt tccatctctt accaaaatca aaaattcatt
    15301 atccatccgc tacatatttt tatgatgcac tacgggtact ctacggacat caagcgtatc
    15361 ttggcaacat acccacttga cgaggtaaga gaacgcctat ttatagataa ggtcgttgag
    15421 aattttgatg tagagcgtta tgtcgtttta ccgaaatact ttgtaaaaaa agatgcgatt
    15481 ttcctctatc acttcaaata tgacgaagag actacgggaa caagggtaaa aaagcttgta
    15541 agccagttta ggttaaatat tcacaatcaa acacatccaa tagaaataga tttttggcac
    15601 acgcaaaagg ttgaattgaa aatccgtggt gttcgacttg gaaatgctgt gttatgcgca
    15661 gaaattatcg gtcttaatca gcccgaaggc gaagatatta cgctagtgct atctcaatcg
    15721 aaaagagaaa aatcgggtaa taaaaccgag gaacaaaata acgaggtaaa taacgttcct
    15781 attaccagag tttatacacg agaacctgaa ttggatgagt taccactcac cgataactcc
    15841 ccagataatc gaacagtcga atacaacaag cgacaatttg aactcttggg ccgtcaacgc
    15901 caaatcagag cgctcaagaa agcacgcgaa gagagtaatc agaaaatgaa agccttgact
    15961 ccagatgaga tagactcact gggtgtaggt gaatcagatg gccgaaacgg taaggttgga
    16021 ctcgctttct gtttccttga tgatacacct gttggcaaaa gctccaaact atacaaatta
    16081 tggcagcacg cgaaggctgt tgcggaatgg aatcacggtg aggcgcactg gtacacgcct
    16141 aatctcggtt ttagaaatga cgatgaactc cttcccgttt ccttagaaac caacaaatgt
    16201 ttcgactacc ctgaaatcgc gataattatc cgcctccaaa tatacggaga aacatttttc
    16261 ctgattgatt tctcaatgaa gcaaagagat ataagcattc gtggcttagg gtataaaccc
    16321 gatccaaacg aagattttct ctatgaaagt gatatgagca aaagcgaatt atccgaatta
    16381 ttgtccgcag ttcatcatca tgaacatctg ccaaaagagt acatagagaa aaagaacaaa
    16441 gaaaaaacca aactcactac atttaaccat agcgaagccg aaagtagtaa ctgggcttat
    16501 aacgcggtgc aaaaattaac ttcaagggca attactaagc cgacatattt ttaattattt
    16561 ttatgaatgc agaacaacgt gtaattgtta ctccgacatt ttggggtaaa ttttttggaa
    16621 aaattaaaag tgttgaactt caacaaaaca aagttatcgt aactgacaaa aagaataata
    16681 taactgaaca tgatttagga aaaacttttg actttccagc tatccagaag tctttctttg
    16741 gtactaaatt attttttaaa gacgatagca cagaagttgt tttatcaaaa cttgcgaaaa
    16801 aacaaactga tagtctatta cttgaaatcg aaaaagtagt tgcatctaat attaaagtga
    16861 aagtaaaaga gggttttcaa cactttgcaa atttagccga aaatcaatat ctcagagatt
    16921 ccgacattcc tacattaaat gatcgtgtaa gattgtcagt gctttcctat ggggataaca
    16981 aagaacattt tcaaaaatac tttgatgaaa gtttggttaa gaaaattcaa tatatctctt
    17041 cactttttcc tgtaaatgcc ataaatgctc aaacaattcg aagagaatac gagcaacatg
    17101 ttttaaatca tcgcaagcat ttctttgatg tcattgaatc taatccgctt actgagcaac
    17161 aaagattgtc agtcattcgg aacaacgaca tcaatatggt tcttgctgcc gcggggacag
    17221 gaaaaacgtc tgtaatggtc gcaaaagcat tggacttaat tgattctggt gcttgtaaaa
    17281 gcgaagatat tttgattctt gcatacaacc gcgatgcagc aaccgaacta tccgaacgct
    17341 tacaagaacg tgcacgagaa gccaatttag atctggaaaa tagccctagc atctcgactt
    17401 tccatgcgct tggccgaaga attattaaag aatgtggaaa atcagtccac ttgtcaaaat
    17461 ttgccgaaga tccgatgaaa ttagatagat ggttcaacaa atggctagag gactacatca
    17521 aagaagatcc tgataatctt gcaaaattca ttcaacttgc ataccaacct atcgatccat
    17581 tccaattcaa aacgaaagac gaatacgata gatatgtaaa tgacaatgac tatcgaacct
    17641 tacaaggcga acgcgttcgt ggttatcaag agttattgat cgcgaactgg ctttttagcc
    17701 acagcgtaga atatgagtat gaaccaaggt atgtatcaaa acgccgtatc gagattggtt
    17761 ttgactacaa acccgatttc tctttgggtg atggtgttta ccttgaacat ttcggcattg
    17821 accgacaagg tagaactcgc gcagatatta acgcgcagga atataatgcc aatatccaaa
    17881 gaaaacgtga gttacacgcc gaacataata caacattact ggagacatac cactacaact
    17941 gggtggaaaa tacgttatat aaacgactag agcaattgat gaatgaacag ttcattcctc
    18001 tgaagccaaa atcacaacaa gagattttag atgcactcaa tgaatcagga atcttcaaag
    18061 aaaacaaaaa tcgctatttg aagtgccttc aagctattcg tacagagcga ttagactatc
    18121 aacaaatctt aaaacgtcta accgatgcga aaattgtcta tgctaaagaa tatgcgacat
    18181 tgctcatgcg tattcatgat gcctacgtta aagaactacg tagcgcaaat gaaatcgact
    18241 ttgacgatat gattttgttg gctactcaac tggtgaaaac aggtgagttt aaacctaaat
    18301 ggaaacatat tttagtcgat gaatttcaag atatttctat ggctcgattg gagttattga
    18361 aagaaattta tactaaaggg cctcgaccga tttggactgt tgttggagat gactggcaat
    18421 caatctatcg tttctctggc ggtaaactag aagttactac gcgatttaat gatatggtcg
    18481 gctcacacac gctaagtaaa ctagaaaaaa cctaccgcta taacaatagt attgctgaca
    18541 cagcaggtca attcattatg caaaatcctg agcagtatca gaaaaatgtt gtaacgcata
    18601 caaaggtcgc tgattcttgt gttcatttgt atgactctca tgtcgtaaag gatgaaaaat
    18661 cagaagccaa tatcagttta aaagcctcag caatattaaa actgatacgt caaaaagcac
    18721 ctgaagccac tgtcgcaatt ttggctagat accgttacct tttagaagat gcaaaaagtg
    18781 taatcaaaga taagaatgtt aaattttgga cgttccacgg ctcaaaaggg ttggaagcag
    18841 attactgcat tttacttggt ttcttccaag gaaaagtcgg atttcccaac caaaataaag
    18901 aagaagccgt tgtagaagca ttgcttccta tgctagacag ttttccacac tcagaagaac
    18961 gtaggttatt ttatgtggca ttaacgcgtg cgaaaaaaga aagttatttg atcgcagatg
    19021 cgaacgcgcc atcagaattt atcaatgaat tattatcacc gaaatacaag atagatattg
    19081 tgtcaaaacg attccaagaa cgttatcgga caatctttaa atgtaatgaa tgtagcactg
    19141 gctatttcgt gatgaaacaa ggtaaatttg gtcagttcta ttcttgtaca tcaggggaag
    19201 tatgccgctc ttcgccacgg atttgtgaaa aatgtggccg tcctatgaag ctgcgagaag
    19261 gtaaatttgg tcagttttgg ggatgctcag gatatggaat caaaggcgat caatgtacga
    19321 atactcgtaa gtattttatg taatatatta ttttggagga ttttgtggat ttatttgaat
    19381 caaaaaaaca attaatagag ttaattaaaa agtacgatag tgataaagaa atttattctt
    19441 catcctcata caatgagtct cagttaagaa ctgacttttt agaccctttc tttggtttac
    19501 ttggatggga tataactaac tcaaagaata aactcacatc tgaaagagaa gtgattgttg
    19561 aagaaccact aaaagaaaaa gtttcagaaa atgtaaaaaa accagattat acatttagat
    19621 tcaattctca aagaaagttt tttgttgaag ctaaaaagcc aagtgtcaaa atcaagactg
    19681 accctttacc tgctcatcag gtaagacgat atggcttcac agcaaaatta agtatttctg
    19741 ttttatctaa ttttgaatat cttgctatat atgattgttc agaaatagtt gatgtacaac
    19801 aagatgctct atacgcaagg gtacgattat atcactatac agaatatgtg aaattttttg
    19861 atgaaattat gaatctctta ggtagagaaa gtgtttattc aggtcatttt gataatgaat
    19921 ggcgtgaaat ctctcaaaaa atagaaaact ctaagcaaac agtggatgaa ctattttttg
    19981 aacaaattaa taagtggcgg catgttctgg gtagtgaatt acttaaaatt aacccttgta
//
LOCUS       DANLXD010000043        19957 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.043, whole genome shotgun sequence.
ACCESSION   DANLXD010000043 DANLXD010000000
VERSION     DANLXD010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19957)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19957)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19957
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.043"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..506
                     /locus_tag="PXD18_001266"
     CDS             <1..506
                     /locus_tag="PXD18_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HDL6301705.1"
                     /translation="GPYYGLDFGFANDPTACVKCWVFDDDLYIEREAGKVRLELDETA
                     AYLANALPDLSNYTVRADSARPESISYLKRHGLPYIQPVPKWKGSVEDGVEHIKSYRK
                     VYIHPSCTEVLKEFRLYSYKTDRLSGDVLPIIIDAHNHYIDAIRYALNPLIQARGEAK
                     QCALKVY"
     gene            519..1922
                     /locus_tag="PXD18_001267"
     CDS             519..1922
                     /locus_tag="PXD18_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4055 domain-containing protein"
                     /protein_id="HDL6301706.1"
                     /translation="MPNSISADFAALKAKTKIIDDLLGGTQKMRQAGQTYLYKMKMEE
                     EDGYKNRLNRSTLYPALRETLSQMLGRVFFNPINVEDVHKQIEPLFDDIDLEGNNLDV
                     FASRWFYAALAYGVSYCLVDFVRVENARSLAEEKAQNARPYLVHIKPQQVLGFKTAKI
                     NGKTAFTQFRYKETVTEDDGEFASKQVNYIYVYEIGRVRKYKNDEGGLSLVADMQIKA
                     QNTPLAFVPIVPFITKPIDVWGMGEPPLMELAYLNIKHWQSQSDQDNILNIARVPLLA
                     IFSDTQIKSLEIGSSAISLPKDSTMQFIEHSGSSINAGLTSLKELEDQMKTAGAKLLT
                     KTALAMTDSQAKDEAGKEISQLRHYANKFEDALDLAFEYIGHWLGIGVDEVGTSQISG
                     NIDNDLDPNASMATIIQLRNAGVISNHSTFEEAKRRGLLSDSAKWEDEQARLQAEGLS
                     DDFTNPFNSNQSENAAS"
     gene            1870..3531
                     /locus_tag="PXD18_001268"
     CDS             1870..3531
                     /locus_tag="PXD18_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HDL6301707.1"
                     /translation="MTLQIHSIRTKVKTPLAKRIAHALTDRKILQFRFDAHLRNQVWQ
                     RLTKTQKALLNRINAAGIDALPKRELDKLLKELKAEIAKNYQETTAYIQPELSGFFAV
                     EKQALTELYNDEIGYDFFNQVPSYQRKATQQATIIAGMPLESWFEKQGSELSFKFEST
                     IRQGLLEGRQTPEIAKATAELFGISRRHADTLVITAVAKVADDAHKALRDENLDLIKG
                     EMHLSTLDTRTSTVCQVRDGKMWDTDYKPIGHSLPYQRPPLHPRCRSILQLVMKDWKE
                     LGFDDVKEMPKSTRASADGQVSEKTNYEEWLSSKTPEEQDKALGKGKADLWRRGVITF
                     SDMLDQSARPLTLKELYSLKNSSSVDKMDSVELVRKKAVAVEPMITRDVVSIITASGG
                     EPAGLDFRLKSLSSLQRKIDTEIMAGVSKEQAIASIRDVIRYTAILDEQRFVEQYQKM
                     QKDLEKQGYSTIIVKNTWKSNNAYKGINTFVSTFIEKNNIIFELQYHTKQSFELKNGK
                     LHELYEKFRDLNIPLAKKSEILLEMQKLSANLKEPKNIDLIKEKK"
     gene            3531..3749
                     /locus_tag="PXD18_001269"
     CDS             3531..3749
                     /locus_tag="PXD18_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301708.1"
                     /translation="MYQYYLAQVGNEQQKLIRGMPDNLLSFSVYEPEQEDWDNKFGPF
                     WADKILISGFDAYEEISEKEAIRFIKVH"
     gene            3750..4163
                     /locus_tag="PXD18_001270"
     CDS             3750..4163
                     /locus_tag="PXD18_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HDL6301709.1"
                     /translation="MCQAEQFARQLHYGQTDKAGKPYIEHLAFVAENISTKNEETEAV
                     AWLHDSVEDTQCSINDIRHIFGDVIADAVEAITKKQGESYFCYLDRVKSNPIAKVVKL
                     ADLTHNLCLERLPKITEKDLKRAEKYKSALEYLQA"
     gene            4281..5015
                     /locus_tag="PXD18_001271"
     CDS             4281..5015
                     /locus_tag="PXD18_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301710.1"
                     /translation="MKLKLDENGHVVVENGMPVYIHDDGKEIPFDALKATQKITQLNA
                     EAKQHREAKEKAEADLKAFSGIDDPKAALEALKTVANLDAKKLIDAGDAEKVKAEIIK
                     GYDEKLAVATAQAEKLQQQLHAELIGGSFARSKYAQEHLNIPSDVVQAFFGKHFSISD
                     DGKVVAKFADGGEIFSRTRPGEKADFEEALEALVSAYPNKDAILKPSGSSGAGAGGGS
                     RSSSMPKTLSDCKTDEERIAYLQANS"
     gene            5081..6028
                     /locus_tag="PXD18_001272"
     CDS             5081..6028
                     /locus_tag="PXD18_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005643804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301711.1"
                     /translation="MAFDLQVFNKQTQLALTETVDQAIEKFNAASGGAIILQNKPAEG
                     DFDIRASFKGIAGLVRRRNVYGTGTVDAKRLEQLLDVAVKVAAGTAPIEYQPSQYKWI
                     LLNPELAAIEIGTQLAKARVADMLNTAIAGTVAAISGNTAMTLDEKTAAPTFRILNKG
                     AAKMGDRAGSLKAWVLHSTTLHGLYDNALTNAENLFKYENVNVIRDPFGRVFVVTDSP
                     ALMASDGTFNTLGLVENAVVVSGNNDFDSVLVPKTGGENLSAVYQAEWTYNLGILGYK
                     WDMTAGGKSPNDTALGTPTNWDKSVTSNKDTAGVLVKTK"
     gene            6088..6438
                     /locus_tag="PXD18_001273"
     CDS             6088..6438
                     /locus_tag="PXD18_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301712.1"
                     /translation="MKRILYFTTDFSAKNIAFAKAHGVLMRNLNAYHPSDTLENADAV
                     CGNVPQAYQHLPLFELPESNQKSGQDLKTLKTEEIKEKLTELGIAFEANAKKETLLTL
                     LTQAVGRDGTNDAK"
     gene            6428..6865
                     /locus_tag="PXD18_001274"
     CDS             6428..6865
                     /locus_tag="PXD18_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301713.1"
                     /translation="MLNSYMTVEQANAYHDIRMSREAWNALSDQEKQQRLVSASDFLD
                     FNYRFSGEKADLTQEREFPRKGFEAIGIPKAVQFAVCELALQDNLTANQEAQMSSVRV
                     GPVSVNYDNSSPQNSVNRFEYVRQLLSTWLDRSSFGTVKLERS"
     gene            6865..7236
                     /locus_tag="PXD18_001275"
     CDS             6865..7236
                     /locus_tag="PXD18_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301714.1"
                     /translation="MADFYGNLGKISHSLIKQFGQPCSVTINEQGRYNPATGERKKGS
                     STVHAGYCLFDNLAFDFRNQQSVSVQQGDVMIYLTADCKPVLNAVIEANGEKWSVINV
                     QPIRPAATTMIYQVQGRKADG"
     gene            7229..7642
                     /locus_tag="PXD18_001276"
     CDS             7229..7642
                     /locus_tag="PXD18_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HDL6301715.1"
                     /translation="MGSFHAQIARFVEQTQQKADRALRVIALQTLSGVQKKSPVDTGQ
                     LRRSWTVALNGFPSSYNGSQTVLNSAKFGDMIVIATNKPYAPMLEYGLYPNPPKKPTG
                     KTKNGYSIQAPNGMVRITVQEMQAFIRNNPQLGVS"
     gene            7642..8034
                     /locus_tag="PXD18_001277"
     CDS             7642..8034
                     /locus_tag="PXD18_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301716.1"
                     /translation="MRPIIRSVLEQHLAELNPFNTVWEGIIDSPKLPYQTVSMTTSTN
                     ETATIGNTPKAKQSGFLQVTLYYPLDQGTKAIEERADEIFRHFFGQVWIEENVQILVQ
                     QPPLVASLYRLDNSIALPVTIYFTAYEL"
     gene            8044..9066
                     /locus_tag="PXD18_001278"
     CDS             8044..9066
                     /locus_tag="PXD18_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301717.1"
                     /translation="MSILGNSQGTKRTVVFAKESSFGTKAAPTGAKIMPRVETSLNTN
                     FESYQSEEIRDDLQRSASVIGFEKVEGDIKGELAAGQWAAFFAAALRGSFTAQAKKPI
                     ITKTTDGTGEKNGKILIVPKTSHTSDSFTLEDVFKDINVSRQYLGCRVSKLSLDVQPN
                     GIASITVSFLGQRGEESTTAYFTNPTDLTQSGKLAGVKGSLQVNKRPVGLVTAFKLDI
                     DLGASSEPVLGAKYAPDVFIGTVAVSGSFTMYFQDKTMIDAVRNGTDLSLALRMDAEE
                     RTNTDYLTIILPGVKVTSNELDDGAKNIMQTLNFDAFPAVWDSASQIDNVLKVATTMI
                     VQDSLA"
     gene            9156..9557
                     /locus_tag="PXD18_001279"
     CDS             9156..9557
                     /locus_tag="PXD18_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301718.1"
                     /translation="MNLNALSKEKQLAEHRFELVHPVSGEPLGVFMSVVSAKSDKAQR
                     FAEKQLRQEQMRELENAKSRKPKFKGLGDMIAESRAMAIDRLTGWENVEWNEKPLEFS
                     DQNAELLLTECDWIVEQIFEHSNDLGKFLKS"
     gene            9572..9898
                     /locus_tag="PXD18_001280"
     CDS             9572..9898
                     /locus_tag="PXD18_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301719.1"
                     /translation="MYAEKTFKLDKKLKGSESTLREHLQAIEMQTGITPEELHNPEPS
                     PAVAYLLGWFFELAMSRQSGMSLNPISYTEIDAWSRLFARHLEQWEISVIKQLDMIYL
                     NVQQTE"
     gene            9900..10223
                     /locus_tag="PXD18_001281"
     CDS             9900..10223
                     /locus_tag="PXD18_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6301720.1"
                     /translation="MDTFNFQPNWGLNVQRKPEVMKIAFGDGYEQVAPKGLNHNLRTY
                     SAVFTGTEARIKQIEAFFERQGGYKAFLWTPYGGKEGKFRCEEWEVSISSGKWTLSAT
                     IREVL"
     gene            10310..11002
                     /locus_tag="PXD18_001282"
     CDS             10310..11002
                     /locus_tag="PXD18_001282"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301721.1"
                     /translation="MKKIFVSALLLTCSLSALGNSSYELIIDSMQDLEKHKPEILSIP
                     EADRNTFIRYMMRKELRIKLNQGRLADGLTVREAIQNQQAFEKDRNSKMQQEKQKKET
                     EKAEKEKAVTDFNQKFELSITGARKAKNALNQDILLVSLSLKNNSDKPIIAVQPDIQF
                     VLGEDKQTISSMRPKKFENGIPPNGSEIFEFGFDLDDMFALKAEKNIEKLRAVFQTAE
                     VLFADGTTEKLQ"
     gene            11066..11890
                     /locus_tag="PXD18_001283"
                     /pseudo
     CDS             11066..11890
                     /locus_tag="PXD18_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015691083.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
     gene            13934..14092
                     /locus_tag="PXD18_001284"
                     /pseudo
     CDS             13934..14092
                     /locus_tag="PXD18_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251214.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
     gene            14100..14816
                     /locus_tag="PXD18_001285"
     CDS             14100..14816
                     /locus_tag="PXD18_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL6301722.1"
                     /translation="MPISISNQMKLDLAKLEQNAMLDLYEVDLRNLKDKSGNAGRVYR
                     FYSGLNELKTSIVWQGRTYDPYPIEASGFERNSSGPSNRPTLTLSNLFGLITSIANQF
                     DECIGAIVRRHQVYAQYLDAVNFAGGNAKADPNQEIISHFVIEQLTSLTRETATFTLA
                     LPIETDNAKIPSRIIMADTCTWIYRSAECGYTGKQYFDEKDKSTSDPKADKCSHCLNG
                     CELRGNQRNFGGFVSVNKLG"
     gene            14820..15551
                     /locus_tag="PXD18_001286"
     CDS             14820..15551
                     /locus_tag="PXD18_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL6301723.1"
                     /translation="MELEQQIIDYALQHEPHEMCGFVVFDGNKNRFIPCENQAEDKAN
                     YFEISDLDYIKAEEKGELVAVVHSHPEPNGKPILSVLDRKMQVQTGLDWWLVHNRQIH
                     KFRNVPHLIGREFKHGTMDCYTLYRDAYMLAGYEMDEFERQDDWWHSGQNLYLDNIQG
                     QGFERVETPQIGDVILMQVGADVPNHAAIYIGEQMVIHHSPNRLSKRDLYDGYWLRHT
                     HSIWRHKLAEKLDFDGILNDIAVQD"
     gene            16185..16847
                     /locus_tag="PXD18_001287"
     CDS             16185..16847
                     /locus_tag="PXD18_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005826391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HDL6301724.1"
                     /translation="MTTQTKLSTFNFETQQIRVIAVNGEPWFVAKDLCDTLGISNPSK
                     AILNLDDDEKMISSDSNLKLGSAGNGAQSLSLVSESGMYTLILRCREAVKKGSVPHRF
                     RKWVTAEVLPQIRKTGAYTKPVEQEPKFTHTLTSDELRDLAWLWFEASKMAETMNTLY
                     QPLMAIGSNLAPMVYSQGVEYGNHIQRMGKLIYRLTYGVDFSNNPTPFRHLQQGVALP
                     HR"
     gene            16930..17520
                     /locus_tag="PXD18_001288"
     CDS             16930..17520
                     /locus_tag="PXD18_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDL6301725.1"
                     /translation="MVKVKFYGHLRKFGTDFKLEVKDTAEAIRALCTQIRGLREALRD
                     GVYKVRIGKQYLDPSALEKGLFYCLKKGQTIHFTPVIKGAKSGGVFQAVLGVALIGAA
                     FFLGPVGWGVLGASSAMMMGAMGASMLLGGVSQMLTKMPKAPTMGNETEKESSTAFSN
                     LNNLVAQGKPVPLAYGLIRTGSLVISQGVETMTVEV"
     gene            17523..>19957
                     /locus_tag="PXD18_001289"
     CDS             17523..>19957
                     /locus_tag="PXD18_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HDL6301726.1"
                     /translation="MGLFSRKRKNHTPKEAPETGRSKQIVNIVELLCEGEIEGLVDGF
                     KSIYLDGTKIQNDDDSYNFNNVSGQLNVGTQDQEVLEGYDSSQNEVSVGVEVKKKNGA
                     IVRTVTDERISRLRLTLGVRSLFHQNNQGDTNTTNVDLKITIGTRQYSHSFNGKYSSQ
                     YLESVVFDNLPPVPFNISVERLTEDSNSQRLQNGTIWSSYTEIIDTEFTYPNSAVAGI
                     SFDSEYFNNIPTRNYLIKAKKVKVPSNYDPVKRTYTGFWDGTFKIAWTNNPAWEIYDL
                     APILSKMLGVEISFDKWALYDVARYCDQLVPDGMGGMEPRFTCNVWLTEVKTAYDLLN
                     DFCSVFRAIPIWTGTEVSVIIDRPRDPVWTYTNANVVGGFERSYSARKSRHNAVQVTY
                     SDKTNGYESAIEYVSDDEEIKKHGLNLSQVTAFGCTSRGQAYRTGKWILETEKREKET
                     ITFTVGREGLMHLPGDIIRVADSHYAGTEIGGRVLAINGRKVTLDREISIDNASYFTY
                     INGEATHSSIKIQSVNGKEITLDSTPTGLETYGVWSLSTKQISSGLYRSISIVENADG
                     TNTITALQHEPQKEAIVDNAAHFVETARTLYKAPQINAVEVSTGYDGKLYISSDISSG
                     DGKLTYDIKITKDGNFYQFKKGLADPNIELSDLPNGDYSVIIYGKNAKGQIVTEKTQT
                     FTIDRPPAPTGVVVTGGLGQITLEWDWVNEVTQTEIFAAETDNFALAKKIAKVTARTY
                     AHTLKGNKVVRYYWLRHARGINVGPFYQQQGVRGESAVDLDARLTELNTQLSRNIVNE
                     VFDVAAPARGLELV"
BASE COUNT         6278 a         3890 c         4632 g         5157 t
ORIGIN      
        1 acggtcctta ttacgggctg gactttggtt ttgccaatga cccaacagcc tgtgtgaaat
       61 gttgggtgtt cgatgatgac ttatatatcg agcgtgaagc agggaaagta agactagagc
      121 tcgatgagac cgctgcttat ttagcaaatg ctttgcctga tttgagtaat tatactgtta
      181 gagcagattc tgctcgccca gaatccatca gttatttaaa acgacatgga ttgccttata
      241 ttcaacctgt tccaaagtgg aaaggctcag tcgaagatgg ggttgagcat ataaaatctt
      301 atcgtaaagt atatattcat ccaagttgta cagaggtatt gaaagaattt cgcctttata
      361 gttacaaaac ggacagatta agtggtgatg tactgcctat cattattgac gctcataacc
      421 actatattga tgccattcgt tatgccttaa atcctcttat tcaggcaaga ggcgaggcga
      481 agcaatgtgc attaaaggtt tattaaaatg aggtaacaat gcctaactcc atctcagccg
      541 attttgcggc attaaaagca aaaacaaaaa tcatcgatga tttactcggt ggcacacaaa
      601 aaatgcgaca agcgggtcaa acctacctct ataaaatgaa aatggaagag gaagatggat
      661 ataaaaaccg attaaatcgt tctacgcttt atccggcatt gagggaaacg ctttcgcaga
      721 tgttggggag agtgtttttt aatccgatca acgtagagga tgtgcataaa caaatcgaac
      781 cattgtttga tgatattgat ttagagggta acaatcttga tgtattcgct tctcgttggt
      841 tttatgctgc attggcttat ggcgtatctt attgcttggt ggattttgtg agggtagaga
      901 atgcccgcag tcttgcagaa gaaaaagctc aaaatgcacg tccgtatttg gtgcatatta
      961 agccgcaaca agtgctgggc tttaaaacag ccaaaatcaa cggtaaaact gcttttaccc
     1021 aatttcgtta taaagagaca gttacagaag atgatggcga gtttgcttct aaacaggtga
     1081 actacattta tgtttatgaa atcggacgtg tccgaaaata taagaacgat gagggtggct
     1141 tatcactggt tgctgatatg caaatcaaag ctcaaaatac accgcttgca tttgtgccta
     1201 ttgttccatt tatcactaaa ccgattgatg tttggggaat gggtgagccg cctttaatgg
     1261 agctggctta tttaaatatt aagcactggc aaagtcagtc agatcaagac aatattttga
     1321 atattgctcg tgtaccgcta ttagctattt tctctgatac tcaaataaaa tcccttgaaa
     1381 tcggctcaag tgcaatatct ctgccgaaag acagtacaat gcagtttatt gagcattcag
     1441 gttcgtctat taatgccggt ttaaccagtc tgaaagaact agaagaccaa atgaaaactg
     1501 ccggtgcgaa actgctaact aaaacagcat tagcaatgac ggatagtcag gctaaagatg
     1561 aagcaggtaa agagatctca cagcttagac attatgctaa caaatttgaa gatgctctcg
     1621 atttggcttt tgagtacatt gggcattggc taggtatcgg cgttgatgaa gttgggactt
     1681 cgcaaatttc aggcaatatc gacaatgatt tagatccaaa tgcgtcaatg gcaaccatta
     1741 ttcagctacg caatgccggt gtcatttcaa atcactctac gtttgaagaa gctaaaagac
     1801 gaggtttatt gtcagatagt gcaaaatggg aagacgaaca agcaaggtta caagcggaag
     1861 gtttaagcga tgactttaca aatccattca attcgaacca aagtgaaaac gccgctagct
     1921 aaacggatcg ctcacgcatt aacagatcgt aaaatattgc agttccgttt tgatgctcat
     1981 ttacgaaatc aagtttggca acgactcaca aaaacgcaaa aggcattatt aaaccgaatt
     2041 aatgcagccg ggatagatgc cttaccgaaa agagagttgg ataaactgct caaagaactc
     2101 aaagcagaaa ttgcaaaaaa ttaccaagaa acgaccgctt acattcagcc tgaattaagc
     2161 ggtttttttg cggttgaaaa acaggcactg actgagcttt acaatgatga aatcggctat
     2221 gattttttca atcaagtgcc gtcatatcaa cgtaaagcta cgcaacaagc gactattatt
     2281 gccggaatgc cgcttgaaag ttggtttgaa aagcaaggat cagagctttc gtttaaattt
     2341 gaaagcacca ttcggcaagg cttgttagag ggtaggcaaa cgcctgagat tgccaaagct
     2401 acggctgaat tatttggtat atccagacgg cacgctgata cacttgtcat tactgctgtg
     2461 gcaaaagtgg cggacgatgc tcacaaggca ttgcgagatg aaaatcttga tttaattaag
     2521 ggtgagatgc acttatcaac gctcgatacc cgcaccagta ctgtttgtca agtgcgagac
     2581 ggtaagatgt gggacactga ttacaagcct atcggacaca gtttgccgta tcaacgccca
     2641 ccacttcacc ctcgctgtcg ttcgattctg caactggtga tgaaagactg gaaagagtta
     2701 ggctttgatg atgtgaaaga aatgccgaaa agcactaggg cgagtgcaga cgggcaagtg
     2761 tcggagaaga caaactatga agagtggctc agtagcaaaa caccggaaga gcaagataaa
     2821 gcgctaggca aaggcaaggc ggatttgtgg cggcggggag tgataacgtt tagcgatatg
     2881 ttagatcaaa gtgctagacc attgacacta aaagagctat attcattaaa aaatagttct
     2941 tcggtagata aaatggatag tgtggaactt gtccgtaaaa aggctgttgc agttgagcct
     3001 atgattactc gtgatgtagt atcaattatt acagcatctg ggggcgagcc tgccggctta
     3061 gattttcgct tgaaatcact atcatctttg cagcgaaaaa ttgatacgga aataatggcc
     3121 ggagtgtcaa aagagcaagc gatagcaagt attcgagatg ttattcgcta cactgcaatc
     3181 ttagatgaac agcgttttgt tgagcaatac caaaaaatgc aaaaagactt ggagaaacaa
     3241 ggttattcta cgatcattgt taaaaacact tggaaatcaa ataatgctta taagggcatt
     3301 aatacgtttg tgagcacttt tattgaaaag aataatataa tttttgaatt gcaatatcat
     3361 acaaaacaaa gttttgagtt gaaaaacggt aaattgcacg agctctatga aaaattcaga
     3421 gatctgaata tacctcttgc aaaaaaatca gaaattttac ttgaaatgca gaagttaagt
     3481 gctaatctaa aagagccaaa gaacattgat ttaatcaagg agaaaaaata atgtatcagt
     3541 attatttagc tcaagttggc aatgaacagc aaaaacttat tcgtggtatg cctgacaatc
     3601 tacttagttt ctcggtttat gagcctgaac aagaagattg ggataataag ttcggcccat
     3661 tttgggcaga caagatcttg ataagcggat ttgacgctta cgaggaaatt tcagaaaagg
     3721 aagcaatccg atttatcaag gtacattaaa tgtgtcaagc tgaacaattc gctcgccaac
     3781 tgcattatgg acaaacagat aaagctggaa agccatacat tgagcatctt gcttttgttg
     3841 cagaaaacat tagcacaaaa aatgaagaga cagaagcagt agcttggttg cacgacagtg
     3901 tagaagatac tcagtgttca attaatgata ttcgtcatat atttggcgat gttattgctg
     3961 atgcagttga ggctattact aaaaagcaag gcgaaagtta tttttgctac ttggatagag
     4021 taaaatcaaa tcctattgct aaggtggtta agttagctga tttgactcat aatctttgcc
     4081 ttgagcgatt gcccaagatc actgaaaagg atcttaaacg agcagaaaaa tacaaatcag
     4141 cattggaata tctacaagcc tagcctaaaa cgctaggctt ttttatcgca attttttacc
     4201 ccaaactgac cgtttgtgag ccatcacagg cggtttttta ttatcgggcg gaagcccacc
     4261 agcaatgaga ggaagctcaa atgaaattaa aattagacga aaacggacat gtagtagttg
     4321 aaaatggtat gcctgtgtat attcacgatg acggaaagga aattccgttc gatgcactaa
     4381 aggcgacaca gaaaatcaca caactgaacg ctgaggcaaa gcaacatcga gaagctaaag
     4441 agaaagcgga agccgactta aaagcattct cagggattga cgatccgaaa gctgcactcg
     4501 aggcattaaa gacggttgcc aatttagatg ctaaaaagct gattgatgcc ggtgatgcgg
     4561 aaaaagtcaa agcggaaatc atcaaaggtt acgatgagaa attagctgtg gcaaccgctc
     4621 aagccgaaaa actgcaacag cagttacacg ctgaattaat cggtggttcg tttgctcggt
     4681 ctaaatacgc tcaagaacac ttgaatattc cgtctgatgt cgtacaggca ttcttcggta
     4741 agcattttag tatttcggat gacggcaaag tggtagctaa atttgctgac gggggcgaaa
     4801 tctttagtcg cacccgcccg ggcgaaaaag cagattttga agaggcatta gaagctttag
     4861 taagtgctta tccaaataaa gacgctattt taaaaccaag tggttcaagt ggggcaggag
     4921 caggtggcgg atcacgcagt tcatctatgc cgaaaacatt atcggactgc aaaacagatg
     4981 aagagcgtat cgcttatctt caagcaaatt cgtaaggtgc aagaggttgc acctttttta
     5041 ttttcggtgc aatcgcacca ctttttagag gaaaatcaaa atggcatttg acctacaggt
     5101 ttttaacaaa caaacgcaat tagccttgac cgaaactgtc gatcaggcta ttgaaaaatt
     5161 caatgcagca tcaggcggtg caatcatttt acagaacaag ccagctgaag gtgattttga
     5221 tatccgtgct agctttaaag gtattgccgg tttagttcgc cgccgtaatg tgtacggtac
     5281 aggtacggta gatgcaaaac gtttagagca attactggac gtagcagtta aagtggcggc
     5341 aggtacagca ccgattgaat accagccgag tcaatataaa tggattttat taaatcctga
     5401 attggcggcg attgaaatcg gcacacaact tgccaaagcc cgtgttgctg atatgctcaa
     5461 tacggctatt gccggcacgg ttgctgcaat tagtggcaat acagcaatga cacttgatga
     5521 aaagaccgcc gctccgacat tccgcatttt aaacaaaggt gcagcgaaaa tgggtgatcg
     5581 tgccggttcg cttaaagcgt gggtgttgca ctccacaacc ttacacggct tatacgataa
     5641 tgccttaacc aatgcggaaa acttattcaa gtacgaaaac gtgaacgtaa ttcgtgaccc
     5701 gtttgggcgt gtatttgtcg tcacagacag cccggcttta atggcttcag acggtacatt
     5761 taacacctta ggcttggttg aaaatgcggt ggtagtttcc ggcaacaatg actttgacag
     5821 cgtgttagtg ccgaaaaccg gcggagaaaa cctttcagca gtttaccaag ctgaatggac
     5881 ctataactta ggaatcctag gttataaatg ggatatgacc gctggtggta aatcaccgaa
     5941 cgataccgcc ctaggcacac cgacgaactg ggataaatcg gttacctcca acaaagacac
     6001 cgccggtgta ttggtaaaaa cgaagtaatt tttaaccgct tgtagataag gtttacaagc
     6061 ggttgttttt ttatctggag tttgcaaatg aaacgaatac tttattttac aacggatttt
     6121 tcggcaaaaa acattgcctt tgccaaagct cacggtgtat taatgcggaa tctgaacgct
     6181 taccacccat cagacacctt agaaaatgca gatgcagtgt gcggtaacgt acctcaagct
     6241 tatcaacatt taccgttgtt tgaattgcct gagtctaacc aaaaatcagg tcaagatttg
     6301 aaaaccttaa aaaccgaaga aattaaggaa aaactgactg aattaggtat tgcttttgag
     6361 gcgaatgcca aaaaagaaac attactaacc ttactcactc aggcggtggg acgtgacgga
     6421 acaaacgatg ctaaatagtt atatgacggt tgagcaagcc aacgcctatc acgacatcag
     6481 aatgagccgt gaggcgtgga atgcgttaag cgatcaagaa aaacagcaac gattggtgtc
     6541 agcgtctgat tttctggatt tcaattatcg tttttcaggc gaaaaagcag atcttactca
     6601 agagcgtgaa tttccacgca agggttttga agctatcggt attcctaaag ccgtgcaatt
     6661 tgcggtatgt gagttggcat tgcaagataa cttgaccgca aatcaagaag ctcaaatgag
     6721 tagcgtaaga gttggcccgg tttcagttaa ttatgataac agttcaccgc aaaacagcgt
     6781 gaatcggttt gagtatgtga ggcagttgct ttccacttgg ttagatcgat cttctttcgg
     6841 cacggttaag ttggagcgta gttgatggcg gatttttacg gcaatttagg gaaaatctcc
     6901 cattctttga ttaagcaatt cgggcagcct tgtagtgtaa caattaacga acaaggcaga
     6961 tacaaccctg caaccggtga gcggaaaaaa ggtagctcaa cggttcacgc aggctattgt
     7021 ctgtttgata atttggcgtt tgatttccgc aatcagcaat ctgtcagcgt tcaacaaggc
     7081 gatgtgatga tttatctcac tgccgattgc aaaccggtat taaatgctgt gattgaagca
     7141 aacggcgaaa aatggtcggt catcaacgtc cagcctatac gcccagcagc taccacgatg
     7201 atttatcaag tacaagggag aaaagccgat gggtagtttt cacgctcaaa tcgcccgttt
     7261 tgtggaacaa acgcaacaaa aagcggatag ggcgttaagg gtaattgccc tgcaaacctt
     7321 aagtggggtg cagaagaaat cgcctgtcga taccggacaa cttcggcgta gctggacggt
     7381 ggcattaaat ggtttcccga gcagttataa cggcagtcaa accgtgctga atagtgctaa
     7441 attcggcgat atgattgtga ttgctaccaa taaaccttat gcaccaatgc tcgaatatgg
     7501 gctttacccg aacccaccaa aaaaaccgac cggcaagacc aaaaacggtt attcaataca
     7561 agcacctaat ggaatggtgc gaattaccgt gcaggaaatg caagccttta tccgcaataa
     7621 tccacaatta ggagtaagct gatgcgaccg attatccgct cggtattaga gcaacatctt
     7681 gccgaactca atccgtttaa tacggtttgg gagggcatca tcgacagccc gaaactgccg
     7741 tatcaaaccg tatcaatgac gacttcaacc aacgaaaccg ccacgattgg taatacgccg
     7801 aaagccaaac agagcggttt tttgcaggtc acgctttact atccgctaga tcaggggaca
     7861 aaggcgattg aggaacgagc cgatgagatc ttccgccact ttttcgggca ggtctggatt
     7921 gaggaaaatg tgcaaattct ggtgcaacag ccaccgcttg tagcctcact ttatcgactg
     7981 gataacagca ttgccttacc cgtcaccatc tattttaccg cttatgaact ataggagaac
     8041 ccaatgtcta ttctaggcaa ttcacaaggc acaaaacgta cggtcgtttt tgccaaagag
     8101 agttctttcg gcacgaaagc tgctccgaca ggcgcaaaaa ttatgcctcg tgttgaaacc
     8161 tcactcaata ccaattttga aagttatcaa tcggaagaga tcagagatga tttacaacgc
     8221 tccgcctctg tgatcggctt tgaaaaggtc gaaggcgata ttaaaggcga actagccgcc
     8281 ggacaatggg cggcattttt tgcggctgca ttacgtggtt catttaccgc tcaggcgaaa
     8341 aagccgatta ttaccaaaac cacagacggc accggcgaga aaaacggtaa aattttgatt
     8401 gtgccgaaaa ccagccacac ctccgacagt ttcacgctgg aagatgtctt caaagacatc
     8461 aacgtcagcc gccagtattt gggatgtcgt gtatcgaaac tcagccttga tgtgcaacca
     8521 aacggtattg cctcgattac agtctcattt ttagggcaac gaggcgaaga aagtacaaca
     8581 gcctatttta ccaatcccac cgatttaacc caatccggca agctggcagg ggtaaaaggc
     8641 tcattgcagg tcaataaacg cccagtcggg ttagtgacgg cctttaaact ggacattgat
     8701 ttaggggcaa gcagtgagcc ggtattaggg gcaaaatacg cccctgatgt ctttatcggt
     8761 acagtggcag tgagcggatc gtttacgatg tacttccaag acaagacgat gattgatgcg
     8821 gtgcgtaacg gcacagattt atcccttgct ttgcggatgg atgccgaaga gcgtaccaat
     8881 accgactatt taaccattat cttaccgggt gtcaaagtga cctcaaacga gttggacgat
     8941 ggggcgaaaa acattatgca gacactcaat tttgacgcat tccctgcggt atgggattca
     9001 gcaagccaaa tcgacaacgt gctaaaagtc gccaccacaa tgattgtgca agacagcctc
     9061 gcttaatcga aattttgcaa aaaaataacc gtatctaacc gcttgccctc aaacaagcgg
     9121 tcttttttat ccccaattta caaaaggaaa cccaaatgaa tttaaacgca ttaagtaaag
     9181 aaaaacagtt agccgaacac cgttttgagc tggttcaccc tgttagtggc gaaccgctcg
     9241 gcgtgtttat gagcgtcgtg agtgctaaga gtgataaggc tcaacgcttt gccgaaaaac
     9301 aattacgcca agaacagatg agagagctgg aaaatgccaa atcccgcaag ccgaaattca
     9361 aaggcttagg cgatatgatt gccgaaagtc gtgcaatggc gattgaccgc ttaaccggct
     9421 gggagaatgt cgaatggaac gaaaaaccgt tggagttttc cgaccagaat gcggagctac
     9481 ttttaaccga atgtgattgg attgtggagc aaatctttga gcattcgaac gatctgggaa
     9541 agttcttgaa gagctaattg atgatttaca ggtgtatgca gagaaaacgt ttaagttgga
     9601 taaaaaactt aaaggcagcg aaagtacctt gcgagagcat ttgcaggcaa tcgaaatgca
     9661 aactggcatt acaccagaag aattgcataa ccctgaaccc agtccagcgg tggcctatct
     9721 gctgggctgg ttcttcgagt tggcaatgag ccgacaatcg ggtatgagct taaacccaat
     9781 tagctacact gaaattgatg cgtggagcag gctttttgct cgtcatctcg aacaatggga
     9841 gatcagcgta attaagcagc ttgatatgat ttacttgaac gtacaacaaa cggagtagta
     9901 tggatacttt caactttcag cccaattggg ggcttaacgt acagagaaag ccagaagtga
     9961 tgaaaatcgc ctttggtgac ggttacgaac aagtcgcccc taaagggtta aaccataatc
    10021 tccgcactta ttccgctgtt ttcaccggca cagaagcacg gattaaacag attgaggcat
    10081 tttttgaacg acaaggcggc tataaggctt ttctttggac accttacggc gggaaagagg
    10141 ggaaattccg ctgtgaagag tgggaggtaa gcataagcag cgggaaatgg acgctgtcgg
    10201 cgacgataag agaagtgttg tagttttttc tgattttgtg aactggttca cactctgtgg
    10261 gttggatata ggttagaatt taagtctaat ttgcttaacg gagtctttta tgaaaaaaat
    10321 ttttgtttca gccttattgc tcacttgctc gttatctgca cttggaaatt cctcgtatga
    10381 gttgattatt gactcaatgc aagatcttga aaagcataaa cccgaaattc tatctatacc
    10441 agaagcggat agaaatactt ttattcgtta tatgatgcga aaagaactgc ggataaagtt
    10501 aaatcaaggc agattagcgg atggtctaac tgtgagagaa gctattcaaa atcaacaggc
    10561 atttgaaaaa gatagaaata gcaaaatgca gcaggagaag caaaaaaaag aaacagagaa
    10621 agcagaaaaa gaaaaagctg ttacggattt taaccaaaaa tttgagctat ccattacagg
    10681 ggcgagaaag gcaaaaaatg cactaaatca agatattttg cttgtttcat taagtctaaa
    10741 aaataactca gataagccaa ttatcgctgt acaaccggat attcaatttg tactgggtga
    10801 agataaacaa actatttcat ccatgcgtcc aaaaaaattt gaaaacggca ttccgcctaa
    10861 tggctcagag atttttgagt ttgggtttga tttagatgat atgtttgctt tgaaagcaga
    10921 aaaaaatata gagaaattga gggcagtctt ccaaacagca gaagttcttt ttgctgatgg
    10981 aacaactgaa aaacttcaat agtaattggt aaatcttcat tggccgcttg tagaaataca
    11041 ggcggttttt ttattggagc aagctatggc agatttagca acactggcga ttaaaatcga
    11101 aacagaaggc gcaagccgag caagtgcaga tctaagtaag gtcgagcaat ctgcaaagaa
    11161 cacagagaaa gccgcagata atctgacgcg cgcaatggga aatttgaagc ggattttagc
    11221 gattgcaggg ctggctggtg ggttatccgc ttacctagat atggctgaaa gaatgcagtc
    11281 gttaaacgca cagcttaaat ttgttactaa ctctcaatac gaattcaata gcgcacaaaa
    11341 agagcttttt gcgattgcgc agaatacgcg cgctagtttg gaaagcacca cgcaacttta
    11401 tattaaatct tctcaggcac tgaaagatta cggctacgcg caaaaggata ttctcacatt
    11461 taccgaaacc attaacaaag caatggcagt tggcggggtt aagccacaag agcaagctag
    11521 tgctttactc caattatcac aggcattagg ttcagggaaa ctgcaaggag atgaattccg
    11581 ttcaatttca gaagctgcac cgattatttt agatacgctt gccgagtata tgggtaaaag
    11641 tcgcgatgaa gtaagaaaac tcgcatccga gggtaagctc accgcagact tactgttcaa
    11701 tgcgtttaac ggttcaagcg ctaaaattac cgaaaaattt aatcaaatgc cgctaacatt
    11761 tggcggtgca atgcagcagt tgcagaatgc cacattgaaa tttatcggtg acctagatag
    11821 tgcaaatggc ttgagtggaa tgttagctca agccattagt tttttagcac agaattttga
    11881 tgtgttaggc aaggctttga tttatgcaac cggtgcttat attgcgttta atgcagttgc
    11941 ctttgctcag aattttgcaa aagcaaccgg tggtgtcggt ttattaagta gtgcatttgg
    12001 ttatttgact acgatgatcc gaggtgcaac tgttgcaatg atggctaatc ctatcgagct
    12061 tttaacaact gcaattattg gggctgcttt tgtatttgat gcttttatca gtgatataga
    12121 ggtaggtgca gcaacctttg atgcgacttg gggagatgtt gcgacagctg tgtgggatga
    12181 ttttaaagat ttaacttcag atgcggcaga ttggttagtc actcaatggg ataaagcaac
    12241 cgccagtgca gcgagttcgt tcagttcctt aggtgttgat attggctcag tatgggagac
    12301 ggtgcaatcc attacgaaaa cattgatcaa tagtattatt ggtctgtttg ttggagctta
    12361 tcaagccatc gtgcttgctt ggaataattt tcctgccaca atggaaaact tgggtgtgat
    12421 ggcggtaaat gctcttgtcg atttggttca aaaaggcatc aatagcatta ttcagcttat
    12481 caaattaccg attgagcttt taaacagagc ctcatctact tttggtggag gaaatctgat
    12541 tgatacatca ggttggaagg caagcttaga tgattttaaa ctaaaggcaa gccgcgaggc
    12601 agaagttgtt ggtcaatcaa ttagccaagc atttgcggat agtatcacca cagattacat
    12661 aggcaatgca gttaattcag tgagtgacta tattgatgga gcggcagttc gtgggcgctt
    12721 aaaacgtcaa ttagatgaaa ccgcctctga cgatcaaggt acgcagtcac cagctaaaaa
    12781 aacattagct ggaaataata actctgctag tgactggaaa aactacctca atgaacttga
    12841 acgagccaat gccgatggat tagcccgtat tgcacttgag caagatcgct caatgcgtga
    12901 aatgttggaa aaggcgaaga aagccggtgc aagtcacgct gaaattgaaa aagccaaaat
    12961 gctgattaca gaacgttatg ctaaagagcg aatggaaatt gccgagaagt atgtgccgag
    13021 tctgaagttt gaggaagaac tcaaagatca gattaaggaa attgatgaac tgcaaaagtt
    13081 aaacctgatt accaccgagc aagcaggtct tgcgaaagag gcgttagcag gcaaatatca
    13141 gccggtagtt gaaatccaac agcaatacat caatcaactg agagagattg aagcattaaa
    13201 acaagccggt gtattaagca aacctcaagc agaagtagcg gccgaaaaag ccaaatggga
    13261 cgccggcaca caaaaagcca aaatcgcagg taaaaacgcc gttagccctt atgaaaaatg
    13321 gaaatcggaa tttgacccaa tgcaggcaat tcaaaatgag caagcctcaa agttggcaga
    13381 agtgcaatcg atgtacgatc agcatttgat ccaatatgag gattttatca acgctaaagc
    13441 acaaattgat gctaaggcga ctgctgatac tcatcaactg tttatgaaca gtattagtgg
    13501 gtttggttcg gcgatagata cgatgttagg cgtgatgaaa aacgcagggc aagagcaatc
    13561 aggtatttac cgcacgatgt ttgcgatgtc gaaagcgttt gctattgcgg aatcaattct
    13621 gaacttgaat cgtgcaatta ctcaagcaat gagcgatcaa acagctatta caccggctca
    13681 aaaatttgca aatatggcgg ctattgctag tgccggggcg agcttgattt ctaatatcca
    13741 gtcagtctca ttaggcggta tggctcacag cggtattgac aatgtgccga aagaaggcac
    13801 ttggttgctg gataaaggtg agcgtgtagt ggatagtcgt actaaccaag acttaaaaac
    13861 ctttttatcc aatgctaatc gtggcggtgc aagtggtcaa agatcggcga taaatgtcaa
    13921 aattattaat aacgggcaac ccgtagaggc gaaagtcagc agtgaagaga ctgtagatgg
    13981 caatatccaa atgacggtgg aactgctgaa gaaaatggat caaatcgccg atcaacgcta
    14041 ccgtagaaat cagttaaatg atttaagaac aggtggaaca ttatctaaat aggtgaagta
    14101 tgccaattag tatttctaac caaatgaaac tagatcttgc caaacttgag caaaatgcaa
    14161 tgctggactt gtacgaggtt gatttgcgca atctcaaaga taaaagtggt aatgctggca
    14221 gagtttaccg cttttattct gggctaaatg aactcaaaac aagtatcgtc tggcaagggc
    14281 ggacttacga tccgtatcct attgaggcaa gtggatttga acgaaacagt agcggcccga
    14341 gcaatcgccc gactctcacg ctatcaaatc tgtttggttt aattaccagt attgcgaatc
    14401 agtttgacga atgtatcggt gcgattgtcc gccggcatca ggtttatgct caatatttag
    14461 atgccgtgaa ttttgccggg ggtaatgcga aagctgatcc aaatcaggaa ataatcagtc
    14521 attttgtgat tgagcagctt accagcctca cccgagaaac ggcgaccttt acgctggcat
    14581 taccgattga aaccgataat gccaagatcc ccagcagaat tattatggcg gacacctgca
    14641 cttggattta ccgctcggcg gaatgtggct acaccggcaa gcagtatttt gatgaaaaag
    14701 acaaatcaac ctcagaccca aaagcagata aatgtagtca ttgccttaat ggttgtgaat
    14761 taagaggcaa tcaacgcaat tttggcgggt ttgtatcggt aaataaattg gggtaatgaa
    14821 tggaattgga acaacaaata atcgactacg ccctccaaca cgaaccgcac gaaatgtgcg
    14881 gctttgttgt ttttgacggc aataaaaatc gatttatccc ttgcgaaaac caagcggaag
    14941 acaaagccaa ttactttgaa atatccgatc ttgattacat caaagcagaa gaaaaaggcg
    15001 aactggtagc ggtggtacat tcacatcccg agccaaacgg caagcctata ttatctgtgc
    15061 ttgatcgcaa aatgcaggta cagaccggtt tagattggtg gctagtgcat aatcggcaaa
    15121 tccataaatt caggaatgtg ccgcatttaa tcgggcgtga gtttaaacac ggtacaatgg
    15181 attgttatac gctctatcgt gatgcctata tgcttgccgg ttatgagatg gacgagttcg
    15241 agcggcaaga tgactggtgg catagcgggc aaaatctcta tttggataat attcaagggc
    15301 aaggttttga gcgagtagaa accccacaaa tcggcgatgt gattttaatg caggttggag
    15361 ctgatgtacc taaccacgct gccatttaca ttggcgaaca gatggtaatc catcatagcc
    15421 cgaaccgatt atctaagcgt gatttatacg acggctattg gttacgtcat acccacagca
    15481 tttggcggca taaactggcg gagaagttag attttgatgg catattgaat gatattgctg
    15541 ttcaggatta gcaaaaaatc tttaaagcag tttaaaagaa atttagccat taagttgtga
    15601 aaatacattt gacaaagcaa aggtgtggaa gtccttcctc attacacaga caatgagcat
    15661 tgttatgatt tcacaacgca atcggaaaaa acaaaccccg aagcgtttgc agcacttcgg
    15721 ggtttttcat atccaaatac ctaataaaaa ggaatgtata tatacaatgg aaattattgc
    15781 atttattgtc acttcaatca aggagattat cacaatgttt gaagaattat caacgtggcg
    15841 atttatcgct attttaatca cgatcatcat ctgttttgct gtgtggaaat cgcctgaaat
    15901 cgtaaaagta ctttacaaca agaaaagttc agagtagtat ttaccccata ggtgtcgaaa
    15961 cctacataaa aggcggtaat ccgcaaccga aacccctatg cggttttttt gtacccgaaa
    16021 tttggggcag aaaaggtcta ttaaattttt gtctatgatc gagtgggtgg cgaatacaac
    16081 acccgaaagg gaaataagcc cagccgacct tttacggctt tcgaaccact tgatcgccct
    16141 aatctacgga ttaggaaatg tcgaaaattt aaaaggatct cactatgact actcaaacaa
    16201 aactctcaac attcaacttt gaaacccaac aaatccgtgt tatcgcagta aatggcgaac
    16261 cttggttcgt tgcaaaagat ctctgtgata cattgggaat ttcaaatcca agcaaagcaa
    16321 ttcttaactt agatgacgat gaaaaaatga tttcttccga ctctaactta aagttagggt
    16381 cggcaggaaa tggtgctcaa agtctaagtt tagtttccga aagcggaatg tacaccctaa
    16441 tcctccgctg tcgtgaagcg gtgaaaaaag gttcagtgcc acaccgtttc agaaaatggg
    16501 taaccgccga agtgttaccg cagatccgaa aaacaggtgc ttataccaaa cctgttgagc
    16561 aagagccgaa atttacccat actctaacaa gcgatgaact acgggattta gcgtggctct
    16621 ggttcgaggc aagcaaaatg gcggaaacaa tgaacacgct ttatcaaccg ctgatggcta
    16681 ttggctctaa tcttgccccg atggtgtata gccaaggtgt ggaatacggc aaccatattc
    16741 agcgaatggg caaactcatc taccgcctca cctatggcgt agattttagc aataatccga
    16801 caccgttccg ccatttacag caaggcgttg cactaccgca ccggtaattc gcaaactttt
    16861 acaaaaaaat gaccgcttgc aggaaactgc aagtggcttt tggcatacat taaatttatt
    16921 ggagcaaata tggtgaaagt caaattttac ggacacctga gaaaattcgg tacagacttt
    16981 aagcttgagg taaaagacac cgctgaggca attcgtgcct tatgtacaca gattagagga
    17041 ttgcgtgagg cattgcgaga cggtgtttat aaagtccgta tcggtaagca atatttagac
    17101 ccatcagccc ttgaaaaagg gcttttttat tgcttgaaga aagggcaaac cattcatttt
    17161 acccctgtta tcaaaggggc gaaaagcggg ggtgttttcc aagctgtgtt aggtgtagcc
    17221 ttaattggag ccgcattttt tctcgggccg gtcggttggg gagttctagg ggcttcttcc
    17281 gcaatgatga tgggagcaat gggggcatca atgttactag gaggagtttc ccaaatgctc
    17341 accaaaatgc caaaagcccc cacaatgggt aatgaaacag aaaaagaaag ctcaacggct
    17401 ttttcaaatt taaataactt ggtggctcaa ggcaaacctg tgccgttggc ttatggctta
    17461 attcggaccg gctcgcttgt gatttcacag ggagttgaga cgatgactgt agaggtataa
    17521 ttatgggatt atttagtcgt aagagaaaaa atcatactcc taaagaagca ccggaaactg
    17581 gtcgctctaa acagattgtg aatatcgtgg agttactctg cgagggtgaa attgaaggct
    17641 tggtagatgg ctttaaatcg atttatcttg acggcacgaa aatccaaaac gatgacgaca
    17701 gctataattt taataatgtg agcggtcagt taaatgtcgg tacgcaagat caagaggtat
    17761 tagaaggtta cgacagctca caaaatgaag tgagtgtggg tgtagaagtc aagaaaaaaa
    17821 acggtgcaat cgtccgcacc gttactgatg aacgcatcag ccgtttgcgt ttaacgttgg
    17881 gcgtgcggtc actattccat caaaataatc aaggcgatac caataccacc aatgttgatt
    17941 taaaaatcac gattggcaca cggcaatatt cgcatagctt taacggcaaa tacagctcgc
    18001 aataccttga atctgtggtg tttgataacc tgccgcctgt gccatttaat atctcagttg
    18061 agcgtctaac cgaggatagc aattcgcaac gcttacaaaa cggtacaatt tggagtagtt
    18121 acaccgaaat tatcgatacc gagtttacct accctaattc agcggttgcc ggtatcagtt
    18181 ttgattcgga gtattttaat aatatcccga cccgaaacta cctaattaaa gcgaaaaaag
    18241 tcaaagtgcc aagcaattat gatccagtta aacgcactta caccggcttt tgggacggca
    18301 catttaaaat tgcgtggacg aacaaccctg cttgggaaat ttacgattta gctccgattt
    18361 taagcaaaat gcttggggtt gaaatcagtt ttgacaaatg ggcgttgtat gatgttgccc
    18421 gctattgcga tcaacttgtg ccggacggta tgggtggaat ggagcctcgt ttcacctgta
    18481 acgtatggct cacggaagtt aaaactgcct atgacttgtt gaatgatttc tgctcggtat
    18541 tccgtgcgat tccgatttgg accggaacag aagtatcggt cattatcgac cgtccgcgtg
    18601 atccggtttg gacttacaca aatgctaatg tagttggtgg atttgaacga tcctactctg
    18661 ctcgcaaatc acgccataat gcagtgcaag ttacttattc ggataaaaca aatggctatg
    18721 aaagtgcgat tgaatatgtc tctgatgacg aggaaatcaa aaagcacggc ttaaatttaa
    18781 gccaagtaac tgcctttggc tgtacatctc gtgggcaagc ataccgtacc ggcaaatgga
    18841 ttttagaaac cgaaaaacgt gaaaaagaaa ccatcacttt taccgtgggg cgtgaaggct
    18901 taatgcactt gccgggcgat attattcgtg tggcagacag ccattatgcc ggtacggaaa
    18961 ttggcggacg tgtactggcg attaatgggc gaaaagtcac gttagatcgt gaaattagca
    19021 ttgataacgc cagttatttt acctatatca acggtgaggc aacgcactct agcattaaaa
    19081 tccaatcggt aaacggtaaa gaaatcacgc tagatagcac gccaaccggc ttagaaacct
    19141 acggcgtatg gtcgttatcg actaaacaaa tcagctcggg cttataccgc tccatctcga
    19201 ttgttgaaaa tgcggacggt acgaatacga ttactgcatt gcaacacgaa ccgcagaaag
    19261 aagcgattgt agataacgct gctcactttg tggaaacggc gagaacgctt tacaaagccc
    19321 cgcaaattaa cgcagtagaa gtctcgactg gttatgacgg caagctctat atctccagtg
    19381 atattagttc tggcgacggc aagctgacct atgatattaa aatcaccaaa gatggcaatt
    19441 tttatcaatt caagaaagga ttagccgacc caaatattga gttgagcgat ttaccgaatg
    19501 gcgattacag cgtgattatt tacggtaaaa atgccaaagg gcaaatcgtc accgaaaaaa
    19561 cacaaacctt tactattgat cgacctccag ctccgaccgg tgtagtagta acaggtggat
    19621 tagggcaaat taccctcgaa tgggattggg taaatgaggt tacgcaaacc gagattttcg
    19681 cagcggaaac tgataatttc gcccttgcaa aaaaaatcgc aaaagtgacc gctagaacct
    19741 acgctcacac actaaaaggt aacaaggttg tacgctatta ttggctaaga catgctagag
    19801 gcattaatgt cggaccgttt tatcaacaac agggggtaag aggcgaaagt gcggttgatt
    19861 tggatgctcg attaaccgaa ttaaacactc agctatcacg caatattgtt aatgaggttt
    19921 ttgatgttgc tgcaccggca cgaggtttag agctggt
//
LOCUS       DANLXD010000044        19835 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.044, whole genome shotgun sequence.
ACCESSION   DANLXD010000044 DANLXD010000000
VERSION     DANLXD010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19835
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.044"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..352)
                     /locus_tag="PXD18_001290"
     CDS             complement(<1..352)
                     /locus_tag="PXD18_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin transporter"
                     /protein_id="HDL6301727.1"
                     /translation="MSIKKVTLASLILLGLTACSSGGSGSSSNNVAKPNTKPQTTQQQ
                     TDKAAAEKAAKDKAAKEKAEAERLAAEKAAKEKAEAERLAAEKAAKEKAEAERLAAEK
                     AAKEKAEAERLAAEK"
     gene            555..2009
                     /locus_tag="PXD18_001291"
     CDS             555..2009
                     /locus_tag="PXD18_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-histidine dipeptidase"
                     /protein_id="HDL6301728.1"
                     /translation="MSEISTLAPQLLWQWFDKACAIPHPSYHENELAEFIVNWAKSKN
                     FFVERDEVGNVLIRKPATKGMENRQTVALQAHLDMVPQANTGTVHDFTKDPIQPYIDG
                     EWVKAKGTTLGADNGIGLASCLAVLDSDDLAHPTIEVLLTMTEEAGMEGAIGLRPNWL
                     TADIMINTDTEENGEIYIGCAGGENVNVTLPIFLVPHQQDSAVTVTLKGLNGGHSGCD
                     IHTTRANAIKVFARILEQAHNEVEFQIAEIQGGSVRNAIPREAHATLVFSAKNQQKLT
                     ACLSQTAEQVKAELKIAEPNFQFLIEEAQLPEQAFDLASTARVIHFLNVMPNGVVRNS
                     DVVENVVETSLSIGVLNTEASEVKATILARSLIEGGKEEIRSKIRSLTALVGAEVEFS
                     GNYPGWEPNPNSKITPLTKAIYDEILGYESQIKVIHAGLECGLINKIYPNMDFVSIGP
                     TILNAHSPDEKVHIPAVEIYWKLLTKLLEQAPEK"
     gene            complement(2084..3373)
                     /locus_tag="PXD18_001292"
     CDS             complement(2084..3373)
                     /locus_tag="PXD18_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6301729.1"
                     /translation="MDIRQKIAHNKMTSFQWLVVGLTVLLNMLDGFDLMALAFTAKSI
                     REELQLDGAAIGSLMSAGLFGMAIGSLFLSPLADKFGRRPLLLIGTGLATLGMLLTYF
                     ATSAFEIGVWRVLTGLGVAAILTGTNVLVSEYSSQKWRGLAIAIYASGFGIGAMLGGM
                     SAVLLQGEYGWRAVFLVGSILTGAVFVLLFFVLPESVEFLISKHPVNAKARLNQIAVK
                     LGLGNGWELPEIEAKSKSKVAITRLFEPEYRRNTLLIWLAFIAISASFYFISSWTPAL
                     LEEAGMPKTQSQTVGMAISVGGTIGSLIFGFLVSRWAAKHILQAFSILAASAVVAFVF
                     AGNLGLAITLAILVGGLINGCITGLYTINPTLYAPDFRSTGVGTAIGVGRLGSIVSPT
                     LAGILLDAGWKKNELYLGAAVVLLIAAFTVHFLKQRK"
     gene            complement(3577..3912)
                     /locus_tag="PXD18_001293"
     CDS             complement(3577..3912)
                     /locus_tag="PXD18_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HDL6301730.1"
                     /translation="MVSEQRQNPEEQKSEEQKINVEVLYAYPDKYFLKKLQVPQNATI
                     QTIILLSGVLEKYTEIDLRENKVGIFSRPAKLNETVEEGDRIEIYRPLIADPKEIRRK
                     RAAEQAEKK"
     gene            complement(3902..4336)
                     /locus_tag="PXD18_001294"
     CDS             complement(3902..4336)
                     /locus_tag="PXD18_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HDL6301731.1"
                     /translation="MPIVNQSALVPYSAEQMYQLVNQYEKYPEFLSGCVSTKTLSTGE
                     NELKAELHIQKLGISQTFSTHNKMTPPYKIEMALIEGPFRHLHGAWTFTPFDEQSCKI
                     ALQLNFEFSSPIVAMVFGKVFNELTLKMVNAFKQRAKEVYGV"
     gene            complement(4391..5446)
                     /gene="modC"
                     /locus_tag="PXD18_001295"
     CDS             complement(4391..5446)
                     /gene="modC"
                     /locus_tag="PXD18_001295"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein
                     ModC"
                     /protein_id="HDL6301732.1"
                     /translation="MLKLKLLQQLGNLTLNVNLDLPNKGITAIFGRSGAGKSSLINLI
                     AGLSTAQAGFIELNGQVLFDSQNGINLPPEKRNIGYVFQEHRLFPHYSVEKNLKYGYK
                     RSDSADFLQIVELLGIAPLLNRYPASLSGGEKQRVAIGRALLSSPNILLMDEPLSALD
                     LPRKQELLDYLDKLSARLEIPILYVSHSLEEVVRLADHLVLLENGKVTAFDTLSAVWH
                     SSAFSAWQPNHQRISLLELPVEETLPHYNMLGLSLNAQRLWVNQLPRHQIGEKLRVTI
                     ASKEVSISLQKPTQSSIRNVLKGNVRKIETHLDRVDLAIQVENQQIWSTISLWSFNEL
                     AIQPEQEVYLQIKSVSL"
     gene            complement(5433..6125)
                     /gene="modB"
                     /locus_tag="PXD18_001296"
     CDS             complement(5433..6125)
                     /gene="modB"
                     /locus_tag="PXD18_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDL6301733.1"
                     /translation="MLNFTPQELNAIVLSLKVASIAVVLALPLAVWVAWLLARKQFWG
                     KNLLNGIMHLPLVLPPVVIGYLLLISMAKRGVIGQYLWEWFHFSLSFSWKGAVLASMV
                     MAFPLMVRSIRLAFEAVDPKLEQAARTLGAIPLKVFFTLTLPLSFSGIIAGGVLGFAR
                     SLGEFGATITFVSNIPNQTQTIPAALFTFIETPDGEMAAARLCLVAILISLIALFCSE
                     WLAERQKRYAQT"
     gene            complement(6309..7064)
                     /gene="modA"
                     /locus_tag="PXD18_001297"
     CDS             complement(6309..7064)
                     /gene="modA"
                     /locus_tag="PXD18_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL6301734.1"
                     /translation="MKALKKLAITMALTLSGTAFSQEITVFAAASMTNVLQDIQQDFE
                     KAYPQDKITFSFASSSVLAKQIEQDAPADIFISADQKWMDYVAEKQPEKVKHRRNLVR
                     NELVLIAPTESNIEPKAIQAVDFAKELANSYLSVGDPNHVPAGKYAKKALSHYQLWES
                     VEPRLARAKNVRDALSFVERGESPLGIVYSTDAKVSNKVKVVAVFPPESYGEIVYPAA
                     AVSEKASAATFLDFLKTPKAKAKFEAAGFYPVN"
     gene            complement(7085..7846)
                     /locus_tag="PXD18_001298"
     CDS             complement(7085..7846)
                     /locus_tag="PXD18_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6301735.1"
                     /translation="MNLIGFYTLAYKECRRILRIWRQTLVPPVITTTLYFLIFGTLIG
                     GRIGEMNGVGYTQFIAPGLIMMTAITASYVNTASSFFLSKFTRDFEEMLISPLSTHNI
                     IWGYVTGSILRAGLAATLVMCVAMVFVSFEIYSVAIIVLTLLLTIIAFALGGVINAVF
                     ARSFDDVGLIPTFVLTPLTYLGGVFYSISLLPEFWQTVSKFNPIVYMINGLRYGFLGI
                     SDVPLGYTFAVLTSLCIGLYIIAYSLIQRGVGLRS"
     gene            complement(7848..8756)
                     /locus_tag="PXD18_001299"
     CDS             complement(7848..8756)
                     /locus_tag="PXD18_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6301736.1"
                     /translation="MKALELIDLVKTYPTGVKAVKGINLVVEQGDFYALLGHNGAGKS
                     TTIGIISSLVNKTSGSVKVFGYDLDTQKVELKHQIGLVPQEFNFNQFEKVIDVLVQQA
                     GFYGIPRSEALVRAEKWLKLLDLWEKRTHLTRELSGGMKRRVMIARALMHNPKLLILD
                     EPTAGVDIELRRSLWDFLRDLNNQGTTIILTTHYLEEAETLCRHIGIIQHGELIENTS
                     MKALLAKLESEVFVLDLQNSEQNQPLVIQNYPHKWLDENTLEVNVKRQQGLTNLFSQI
                     SAQGAEVLSMRNKSNRLEELFINMAQ"
     gene            complement(8762..10819)
                     /gene="dnaX"
                     /locus_tag="PXD18_001300"
     CDS             complement(8762..10819)
                     /gene="dnaX"
                     /locus_tag="PXD18_001300"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HDL6301737.1"
                     /translation="MSYQVLARKWRPQRFSEVVGQQHVLSALENSLREDRLHHAYLFS
                     GTRGVGKTSIARLFAKGLNCVNGITAEPCGECANCKAIEEGHFIDLIEIDAASRTKVE
                     DTRELLDNVQYKPTVGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQ
                     KLPITILSRCMQFHLRALEQSQIARHLEFILNAENIPFEPLALEKLAKAAQGSIRDSL
                     SLTDQAIAMSNANITLAIVSQMLGLIDDNQPLELVQATAQADGEKAMAIIEQIAAKGV
                     DWQQLLSDVAEVLHKIAMLQLVKTPTTEETLVHFLAKQIPPEDVQFFYQLILNSKKEL
                     PFAPEQRAGVEMAILRALAFHPKQAEKIATVAVEKVTQPNHSVSAVTTAKPQNQISQL
                     RENFEQNQQKTVTVANTTTAVESIAQPPQAVDTAISPSAPATLSPAMAALEARKKLQA
                     QQANLAQTEKKKPELKAPQVIAKKSANQTASLQERFISLAENQHKAVLQVSKKTESAP
                     KSVEDEDYRWTWLNPELENQADSAKPSDIKQAILQERTPELVAKTIHLSCQQDKWCDI
                     ANSLNLGGFSRQIALNSYLAEQNEQHLALVLKPNMAHLDNPESRKNLEAALAEKGYSY
                     ELTIGDNSEQQTPLEIRRAIFKQLTEAAKSALLNDEKLMLLRNAFDAQIDESTIRAVA
                     ETE"
     gene            complement(10910..11449)
                     /gene="apt"
                     /locus_tag="PXD18_001301"
     CDS             complement(10910..11449)
                     /gene="apt"
                     /locus_tag="PXD18_001301"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HDL6301738.1"
                     /translation="MNQLDLIKSSIKSIPDYPKAGIIFRDITSLLEVPTAFQATIDAI
                     VAEFKDKGITKIVGTESRGFIFGAPVALALGVPFVLVRKPKKLPREVISQSYTLEYGE
                     DTLEIHKDAVSANDNVLVIDDLLATGGTIDATAKLIRRLGGNVEHAAFVIWLPELGGK
                     ERLEKEGVKSFSLVSFEGH"
     gene            complement(11577..12527)
                     /gene="lpxM"
                     /locus_tag="PXD18_001302"
                     /gene_synonym="msbB"
     CDS             complement(11577..12527)
                     /gene="lpxM"
                     /locus_tag="PXD18_001302"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249087.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HDL6301739.1"
                     /translation="MTRITAQDGYTHKFLWSFLHPKYWGVWLGVLGLVILAYVPVRIR
                     DKLSAFVGKMAYRYLKQKNKKGYHRAKVNLRYCFPDWSEKKREEVVEKMFITVAQTML
                     AIGETAIRPASYLQKRCEFTGFENVVKAKESGKNVIMLVPHTWSIDMAGVAMFSLGYP
                     MTSMYNPHRNALVDWLWNITRERLGGRMHTRQNGIKAFLADVRKGDVGYFLPDEDFGE
                     ELSVYADFFATEKATLPGLNKMARVANAEVIPMFSIYNAEKAKYEMEILPPLEFSGDP
                     IQSAREMNRVIEYFVEKNPEQYVWILRLLKTRRNREDIYL"
     gene            complement(12968..13651)
                     /locus_tag="PXD18_001303"
     CDS             complement(12968..13651)
                     /locus_tag="PXD18_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit E"
                     /protein_id="HDL6301740.1"
                     /translation="MEREQQIPVTNIDVAPKQSSVWKTIFADGVWKNNGALVQLLGLC
                     PLLAVSNSVTNALGLGLATMFVLICTNITVSLFRKITPHDIRIPIYVMVIATVVTAVQ
                     LLMNAFAFPVYQSLGIFIPLIVTNCIVIGRAEAYASKNEVKFSAFDGFSMGLGMTFSL
                     VVLGALREIIGNGTLFSGLDLLLGDWAKALRIDVLHIDSGLLLAILPPGAFIGLGVIL
                     AVKNIIDKR"
     gene            complement(13660..14292)
                     /gene="rsxG"
                     /locus_tag="PXD18_001304"
     CDS             complement(13660..14292)
                     /gene="rsxG"
                     /locus_tag="PXD18_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxG"
                     /protein_id="HDL6301741.1"
                     /translation="MNTSKITLNYALILGFIALLCTAVSTGVYLLTKGKIDDVTAMQQ
                     RKLLEEVVPKSHFDNDVLATCKLVQLENAPYLNRIYVAKKSENLTAYLVQGTAPDGYS
                     GDIVLLMGIEPNGNILGVRTLEHKETPGLGDKIETRVSDWILSFTNQLFSLENEADWN
                     VKKDGGKFDQFTGATITPRAVVNHIRQSAKWVVTELAQNPTMFNQFKACK"
     gene            complement(14292..15347)
                     /gene="rsxD"
                     /locus_tag="PXD18_001305"
     CDS             complement(14292..15347)
                     /gene="rsxD"
                     /locus_tag="PXD18_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxD"
                     /protein_id="HDL6301742.1"
                     /translation="MFKMVSSPHTHSSNLTANFMLWVIAMMLPAFGVQLYYFGYGVLI
                     QTLLAVSLAIVIEIGIAKLRKKTTAFYLADLSGILTALILAMSIPPYAPYWLVLIGVI
                     VALLLAKHSYGGLGQNLFNPAMVGYALLLVSFPVQMTAWIVPIELLSEPPTFRDAISL
                     IFYGVTSDGFSIHQLVNSVDGIAQATPLDSMKSSLAKSGFDAVMNTPIFNGLFATGWL
                     QLNLAFLFGGLVLIYKRIIHWQIPVAMLATFAFFSGFTELFSQQSHLHFVSHFFSGAM
                     MFGAFFIATDPVTASITPRGKLIFGGLVGLLVYLIRYYGNYPDAIAFSVLLANICVPL
                     IDHYTQPRLYGTKLDNR"
     gene            complement(15393..16028)
                     /locus_tag="PXD18_001306"
     CDS             complement(15393..16028)
                     /locus_tag="PXD18_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HDL6301743.1"
                     /translation="MFSELIPALPWSFLFIQDLIGTIVFAISGAIAARQHKMDIFGMF
                     ILAFVTGVGGGTLRDMMIGSTPVFWMKQPIYVLMITLAVVITAIFRNQISRKSWQTGL
                     LVFDAIGLGVFTVIGVQKGLDFGLHPLICVALGGVTGCFGGLIRDILRNEVPIILQKE
                     VYVTASLIGGVIFVAANSVGLESDWVYLATVFTVIIIRLLAIRFNLNLPRL"
     gene            complement(16021..18315)
                     /gene="rsxC"
                     /locus_tag="PXD18_001307"
     CDS             complement(16021..18315)
                     /gene="rsxC"
                     /locus_tag="PXD18_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxC"
                     /protein_id="HDL6301744.1"
                     /translation="MSNPNLVIERIRQNKETGKLWDFPGGIHPMENKSQSNSKPIRTL
                     NLPKFFYVPLVQHSGWAGELLVKVGDVVLKGQPLTKGDHFRQLPVHSPTSGRVIGIEP
                     YVSAHASGLPEITVIIETDGKDKWVERQPIEDFLSLTSDQIIQKVYQYGIAGLGGAVF
                     PTATKLSLADKRCKLLVINGAECEPYITCDDRLMQDFTADLIEGIRILRYVLRPEEVV
                     IAIEDNKPHAIQALETALKGSNDMFVRAIPTKYPSGASDQLIQVLTGLEIPAGKRTIE
                     MGIVMHNVGTAFAVKRAIIDDEPLIERVVTLTGDKIRNKGNVWARLGTPIQHLLEQVD
                     YQADKRFPVFLGGPMMGFILPALQAPITKTANCLIAPDHFEYAPPEPERSCIRCSSCS
                     DACPVGLLPQQLYWFARAEDHDKSKEYHLDACIECGVCAYVCPSYIPLIQYFRQEKAK
                     IEEIEEKARKAEEAKIRFEAREARLQKERDARTARISQAAEKRREEVANAGGVDPVKA
                     ALERLKAKKAVETVQEIPAEVQVKPNGEPDNSDLMAQRRARRLAKQAEQAVEKSENVT
                     NALIGANNDLPLQSMNETASDKSVGANNYSPEAESEDPRKAAVAAALARAKAKKQAQQ
                     AVEKSENITNAVIGVNNDLPLQSMNETVSDKSVGANNHSPETESEDPRKAAVAAAIAR
                     AKAKKQAQQAVEKPEDIANAVIGVNNDLPLQSMNETTSDKSVGANNHSPKTESEDPRK
                     AAVAAAIARAKAKKAAQQEKSNNV"
     gene            complement(18302..18919)
                     /gene="rsxB"
                     /locus_tag="PXD18_001308"
     CDS             complement(18302..18919)
                     /gene="rsxB"
                     /locus_tag="PXD18_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxB"
                     /protein_id="HDL6301745.1"
                     /translation="MLDLPIIAYILIAIAVIALIFGAVLGYSSIKLKVESDPIVDQID
                     ALLPQSQCGQCGYPGCKPYAEAIANGDVITKCVPGGQPLVVNLAELLGVEVPPMEGMA
                     EPEMKVAFVIEDLCIGCTKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTNC
                     IEMRPIKPTTQSWNWKFDQDLIIPIVNTTELQRKLVTGGGKNEQS"
     gene            complement(18919..19500)
                     /gene="rsxA"
                     /locus_tag="PXD18_001309"
     CDS             complement(18919..19500)
                     /gene="rsxA"
                     /locus_tag="PXD18_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxA"
                     /protein_id="HDL6301746.1"
                     /translation="MVDYILLVISTALINNFVLVKFLGLCPFMGVSKKVETAIGMGLA
                     TTFVLTVASLSAYLMETYLLEPLNAQFLRTLVFILVIAVIVQLTEMIVHKTSPTLYRL
                     LGIYLPLITTNCAVLGVALLNVNLANNLVESVLYGFGAAAGFSLVLVLFAALRERLAA
                     ADVPRPFQGASIALITAGLMSLAFMGFTGLVKL"
BASE COUNT         5624 a         4518 c         4147 g         5546 t
ORIGIN      
        1 ctttttccgc cgctaaacgt tctgcttcgg ctttttcttt cgctgctttt tccgccgcta
       61 aacgttccgc ttcggctttt tctttcgctg ctttttccgc cgctaaacgt tctgcttccg
      121 ctttctcttt agctgctttt tctgctgcta aacgttctgc ttctgctttc tctttcgctg
      181 ccttgtcttt tgctgctttt tctgctgccg ctttatcggt ttgttgctga gtagtttgcg
      241 gtttagtatt cggttttgcc acattgtttg agctactgcc cgaaccacca ctactacacg
      301 ccgttaaacc caataaaatc aaactggcta aagttacttt tttgatagac ataaaatgtt
      361 ccttttgtaa gataaacaaa aatagatgtg tataaaacac acgcatattg tacaaaaaaa
      421 aaacaactcg tcatcaagta ctttttaaga tttttttgtt aaatttctcc taaatattct
      481 acaatgtcag aggtctatat cagcttgaat acaagcggtt attttttctt aaaattttac
      541 aaaaggggct tattatgtct gaaatctcaa cgctcgcacc gcagctactt tggcagtggt
      601 ttgataaagc ctgtgctatt ccgcacccgt cttaccacga aaatgaactg gctgaattta
      661 ttgtgaattg ggcaaaatcg aaaaatttct ttgttgaacg tgatgaagtg ggtaatgtgt
      721 taatccgtaa accggcaact aaaggtatgg aaaaccgcca aactgtcgct ctgcaagccc
      781 atcttgatat ggtgccacaa gccaataccg gcacggttca cgatttcact aaagatccga
      841 ttcagcctta tattgacggc gaatgggtaa aagccaaagg cacaacattg ggggcagata
      901 acggcattgg attggcttcg tgcttggcgg tgttggatag cgatgattta gcccacccaa
      961 ccattgaagt gttgctcaca atgaccgaag aagccggtat ggaaggggcg attggtttac
     1021 gcccgaactg gctaaccgcc gatattatga ttaacaccga caccgaagaa aacggggaaa
     1081 tttacatcgg ctgtgcaggt ggggaaaatg tgaatgtgac actgccaatt ttcttggtgc
     1141 ctcatcagca agatagtgca gtaaccgtta cgcttaaagg cctaaacggc gggcattcgg
     1201 gctgtgatat tcacaccacc cgagcgaatg cgattaaagt gttcgcccgc attttggaac
     1261 aagcccacaa cgaagtggaa ttccaaattg cagaaattca aggcggttcg gtgcggaatg
     1321 ccattccacg agaagcccac gcaaccttgg ttttctctgc aaaaaatcag caaaaattaa
     1381 ccgcttgttt aagccaaacc gccgaacaag taaaagcaga actcaaaatt gccgagccaa
     1441 acttccaatt tttaattgaa gaagctcaac tgcctgagca agcctttgac cttgccagca
     1501 ctgctcgagt aatccatttc ttaaatgtga tgccaaatgg tgtggtgcgt aatagcgatg
     1561 tggtggaaaa tgtggtggaa acctcactca gtattggtgt gcttaacacc gaagcgagtg
     1621 aggtgaaagc gaccattctt gcccgctcat taattgaggg cggaaaagag gaaattcgca
     1681 gtaaaatccg ctcattaacc gcattagtgg gagcagaagt ggaattttcg ggcaactacc
     1741 cgggctggga gccaaaccca aattccaaaa tcacgccatt aaccaaagcg atttatgatg
     1801 aaattttagg ttatgaatct caaattaaag tgattcacgc agggctagaa tgtggcttaa
     1861 tcaacaaaat ctacccgaat atggattttg tctcgattgg accaactatt ctcaacgccc
     1921 attctccgga cgaaaaagtg catattccgg cagtggagat ttattggaaa ctcctaacca
     1981 aactacttga acaagcacct gagaaataaa tttaatcaaa aaaattatat aatcttgccc
     2041 cgtaattaat tgaataaaac ctcaattaat tacggggtag ctcttatttt ctctgtttta
     2101 aaaaatgtac cgtgaaagca gcaattaata agacgactgc tgcacctaaa taaagctcgt
     2161 tctttttcca gccggcgtct aataaaatac ctgcaagagt tggggaaaca attgagccta
     2221 aacgccctac accgatggcg gtgcctacgc ccgtgctgcg gaaatccggt gcgtataggg
     2281 ttgggttaat ggtataaagc ccggtaatgc agccgttaat taatccgcca accaaaatgg
     2341 ctagtgttat cgcaagccct aaattgccgg caaacacaaa ggcaaccaca gcagatgcag
     2401 ccagaatact gaatgcctgc aaaatatgtt ttgccgccca gcgactgact aaaaagccga
     2461 aaattaacga gccgattgta ccaccaactg aaattgccat tcccacagtt tggctttggg
     2521 ttttaggcat tccggcttct tctaatagtg ccggagtcca agagctgata aagtaaaatg
     2581 aggctgaaat tgcaataaag gcaagccaaa ttagcaacgt attgcggcga tattcaggct
     2641 cgaataaacg ggtaattgcc actttgcttt tactttttgc ctcaatttca ggaagttccc
     2701 agccgtttcc taagcctaat ttaacggcaa tttgatttaa acgagcttta gcattcaccg
     2761 ggtgttttga aattaaaaat tccaccgatt cgggcaatac aaagaataat aaaacgaata
     2821 ccgcaccggt taaaatcgac ccaacgagga aaaccgcacg ccagccatat tctccttgca
     2881 ataacaccgc agacattccg cccagcattg caccaatccc aaagcctgag gcataaattg
     2941 caatcgctaa gccacgccat ttttggctgg agtattcact cactagcaca ttagtgccgg
     3001 ttaaaatggc ggctacgcct aaaccggtta aaacacgcca tacaccaatt tcaaacgcag
     3061 aagtagcgaa ataagttagg agcattccta acgtggctaa gcctgtgccg attaaaagca
     3121 acgggcggcg accaaattta tcagcaagtg gtgaaagaaa gagtgagcct atcgccatac
     3181 cgaataaacc ggcactcatt aagctgccga tggctgcacc gtctaactgc aattcttctc
     3241 ggatgctttt ggcggtaaag gcgagtgcca ttaaatcaaa gccgtccagc atattaagta
     3301 acaccgtaag cccaaccact aaccattgga atgaagtcat tttgttatga gcaatttttt
     3361 gacgaatatc cataagctcc ctctgcatca aaattgataa aattttattt agagtgaact
     3421 atagaaagtt gattaaatat aatcaaactc aaaatttaca taaaatttat gaaagatttt
     3481 catatttaat caaaggaggg aatttatagc aggaatggcg agggagaaaa tagatagggc
     3541 gaataattat tcacccctag attgaatagg agaaagctat ttcttctccg cttgctcagc
     3601 cgctcttttg cgtctgattt ctttcggatc agcaattaac gggcgataga tctcaattct
     3661 gtcgccttct tccaccgttt cattcagttt tgccgggcgg ctaaaaatac cgactttgtt
     3721 ttcacgcaag tcaatttcgg tatatttttc caacacgccg gagagcaaaa taatagtttg
     3781 aatggtcgcg ttttgcggta cttgcagttt tttcagaaaa tatttatcag ggtaagcata
     3841 aagcacctca acattaattt tctgttcttc acttttttgt tcttctggat tttgacgttg
     3901 ttcagacacc atacacctct tttgcacgtt gtttgaaagc atttaccatt tttaaagtta
     3961 attcgttgaa caccttgccg aacaccattg ctacaattgg gctggaaaat tcaaaattta
     4021 attgcagggc aattttgcaa ctttgctcat caaagggggt gaatgtccaa gctccgtgta
     4081 aatggcggaa aggcccttca attaatgcca tctcgatttt atagggcggc gtcattttat
     4141 tgtgggtact gaaagtttgg ctaatgccta atttctgaat gtgtaactct gcctttaatt
     4201 cattttcgcc ggtgctaagg gttttggtac tcacgcagcc ggataaaaat tcggggtatt
     4261 tttcatactg attaacaagt tgatacattt gctcggcact ataaggcacg agggcagatt
     4321 gattaacgat tggcataatg tctcttttgg gaattaacaa gcggtcatat tttagcgtaa
     4381 atttgcaagc ctataaagaa acgcttttga tttgaagata gacctcttgc tccggttgaa
     4441 tcgctaattc attaaaagac caaaggctga tcgtactcca aatttgctga ttttcgactt
     4501 gaattgccag atcaacccga tctaaatgcg tttctatttt ccgaacattg ccttttaaca
     4561 cattacgaat tgagctttga gtcggttttt gtaagctgat tgaaacctct ttgctggcaa
     4621 tagttaccct tagcttctcg cctatttgat ggcgggggag ttggttcacc cataatcgct
     4681 gtgcgttcaa gctcaagcca agcatattat agtggggaag tgtttcttcc accggtaatt
     4741 caagcaggct aattcgctga tgatttggct gccaagcgga aaatgccgag ctgtgccaaa
     4801 ccgctgaaag ggtatcaaat gcggttactt tgccgttttc caacagcaca agatgatctg
     4861 ccaatcgaac tacttcctct aaactgtggc tgacatacag aatcggtatt tcaagccgag
     4921 cggataattt atctaaatag tccagtagct cttgcttacg agggagatcg agggcagata
     4981 atggttcgtc catcagcaaa atattcggtg agcttaataa cgcccgccca atcgccacac
     5041 gttgtttttc gccaccggaa aggcttgccg gatagcgatt aagcaaaggg gcaatgccta
     5101 acagttccac aatttgcaaa aaatccgcag aatccgaccg cttgtagcca tattttaagt
     5161 ttttttccac cgaataatga gggaaaaggc gatgctcttg aaacacatag ccaatgttgc
     5221 gtttttcagg tggtaaattg atgccgtttt ggctgtcaaa cagcacctga ccgtttaatt
     5281 cgataaagcc ggcttgagcg gttgaaagcc ccgcaattaa attaatcagg ctggatttac
     5341 cggcaccgga acgcccgaaa atagcggtga ttcctttatt cggcaaatcg agattgacat
     5401 tgagcgtcag attgccgagt tgctgaagaa gtttaagttt gagcatagcg tttttgcctt
     5461 tctgccagcc attccgaaca gaacagggca atgagtgaaa tcagaatcgc caccaagcac
     5521 aaacgggcgg cagccatttc gccatcgggg gtttcaataa aggtgaaaag ggcggcagga
     5581 atggtttggg tttggttggg aatgttggag acaaaggtga tggttgcccc aaactccccc
     5641 aaagagcggg caaaacccag cacgccaccg gcaataatgc ctgaaaaaga gagcggtaaa
     5701 gtgagcgtga aaaacacttt taacggtatt gctccaagcg ttctggcggc ttgctccaat
     5761 ttaggatcaa ctgcctcaaa ggctaaacgg atagaacgca ccattagcgg aaacgccatc
     5821 accattgagg caagcactgc tcctttccac gaaaaactca agctgaaatg aaaccattcc
     5881 cacaaatatt gcccgattac ccctcgtttc gccatcgaaa taagcaataa atagccaatg
     5941 acaaccggcg gtaacaccag agggagatgc ataataccat tgagcagatt ttttccccaa
     6001 aactgtttgc gggcaagcag ccacgccacc cacacggcaa gcggtaatgc aagcactaca
     6061 gcaatggagg caacttttag gcttagaaca atcgcattga gttcttgtgg ggtgaaatta
     6121 agcataatct aaaactattt ggttataagc ttaccctcgc cccttgtggg agagggatag
     6181 atttttcttc gttcagaaga aaaatcaggg agagggggaa tattttaaac gctatttgcc
     6241 ctctctctga aaaatatgtc tgaacgacat atttttctgt ctctctccca caaggggaga
     6301 gagtaaattt aatttacagg ataaaaccca gctgcctcaa atttcgcttt tgctttcggg
     6361 gttttgagaa aatctaaaaa tgtggcggca gaggcttttt cactgactgc cgcagcaggg
     6421 taaacaattt cgccgtagct ttccggtggg aaaacggcaa ccactttgac tttattcgac
     6481 actttagcat cggtggaata gacaatccca agtggggatt cgcctcgctc gacaaaagag
     6541 agggcatctc gtacattttt tgccctcgct aaacgaggtt caacactttc ccataattgg
     6601 taatgactaa gggctttttt ggcatatttg ccggcaggaa cgtggtttgg gtctcccacc
     6661 gataaatagc tgtttgctaa ttctttggca aaatcgaccg cttgtatcgc ttttggctca
     6721 atgttacttt cggtaggtgc aattaatact aactcgtttc tgactaaatt gcggcgatgt
     6781 ttaactttct caggttgttt ttcggcaaca taatccatcc acttttggtc ggcggaaata
     6841 aaaatatctg ccggtgcatc ttgctcaatc tgctttgcta ataccgatga tgaagcgaag
     6901 gagaacgtga ttttatcctg tggataggct ttttcaaaat cctgctgaat atcttgtaac
     6961 acatttgtca ttgaagcggc agcaaacacg gtaatctctt gtgaaaaggc tgtgcctgat
     7021 aacgttaatg ccattgtaat tgctagtttt tttaatgctt tcattttcat aacctcacaa
     7081 ttagttaaga acgcagccca acccctcgtt gaattaagga ataggcaata atatacaagc
     7141 cgatgcaaag tgaagtaagc actgcaaaag tataacctaa cggcacatcg ctgataccga
     7201 gaaagccata tcttaagccg ttaatcatat aaacgatcgg gttgaattta gacaccgttt
     7261 gccaaaattc aggcagtaat gaaatagagt aaaatacgcc gcctaagtaa gttaagggag
     7321 taagcacaaa ggttggaatc agccccacat catcaaagga gcgggcgaac accgcattaa
     7381 ttacgccacc taacgcaaag gcaatgattg tcagcaacag ggttaagacg ataatcgcaa
     7441 ccgagtagat ttcaaacgag acaaacacca ttgccacgca cattactaag gttgcggcta
     7501 aacctgcacg caaaatactg ccggtgacat aaccccaaat aatattatgg gtagagagtg
     7561 gcgaaatcag catctcttca aaatctcggg taaatttact caagaaaaat gaagaggcgg
     7621 tattcacata agaggcggtg atggcggtca tcataattaa gccgggtgca ataaattggg
     7681 tgtaacccac gccattcatt tccccgattc gcccaccaat cagcgtgccg aagattaaaa
     7741 aatagagcgt ggtagtaatc accggtggca ctaaagtttg tcgccaaatc cgcaaaatgc
     7801 ggcggcactc tttgtaagct aaggtataaa atccgattaa attcatttta ctgagccata
     7861 ttgataaata gttcttccaa gcggtttgat ttgtttcgca tacttagcac ctcagcccct
     7921 tgggcggaaa tttgcgaaaa cagattggtt agcccttgct ggcgttttac attcacttca
     7981 agggtgtttt catcaagcca tttatgcggg taattttgaa tcacaagcgg ttgattttgc
     8041 tcagaatttt gcaaatctaa cacaaatacc tcactttcca atttggcaag caaggctttc
     8101 attgaggtgt tttcaattaa ttcgccgtgt tgaataatgc cgatgtgacg gcatagggtt
     8161 tccgcctctt ctaaatagtg ggtagtgaga ataatagttg tgccttgatt gtttagatcc
     8221 cgcaagaaat cccacaatga gcggcggagt tcaatatcca cccctgcggt aggttcatct
     8281 aaaatcagta gttttggatt gtgcattaag gctcgggcaa tcatcacccg acgtttcatt
     8341 ccaccagaaa gctcacgggt gaggtgggtg cgtttttccc ataggtcgag caatttcagc
     8401 cacttttcgg cacgtactaa ggcttcactg cgaggaatgc cgtaaaaccc ggcttgttgc
     8461 actagcacat caatcacttt ttcaaactga ttgaaattaa actcttgtgg cactaagccg
     8521 atttgatgct ttaattcgac tttttgggtg tctaaatcat agccaaacac tttcacgctg
     8581 ccgctggttt tatttaccag tgagctgata atgccaatag tagtagattt acctgccccg
     8641 ttatgcccaa gtagggcata gaaatcacct tgctcgacca caagattaat gcctttaacg
     8701 gcttttacac ctgttgggta ggtttttacc aaatcaatta attctaatgc tttcatttgt
     8761 tttactcagt ttccgccacc gctcgaatgg tcgattcatc aatttgtgca tcaaaagcgt
     8821 tgcgaagtaa cattaatttt tcatcgttaa gcagagctga ttttgctgcc tcagttaatt
     8881 gtttgaaaat ggctcgccga atttcaagcg gagtttgctg ttcgctattg tcaccaatgg
     8941 tcaattcgta tgaatagcct ttttcggcaa gggcagcttc taaattttta cgtgattccg
     9001 gattatctaa gtgagccata ttcggcttta acaccaatgc gaggtgctgt tcattttgtt
     9061 ccgctaaata gctatttaag gcgatctgac gggaaaatcc gcctaaattg agtgagttgg
     9121 cgatgtcaca ccatttatcc tgctgacaag ataaatgaat ggtttttgcc actaattcag
     9181 gggtgcgttc ttgcaaaatc gcttgtttaa tatcagaagg tttggcactg tctgcttgat
     9241 tttctaattc aggattgagc cacgtccagc gataatcttc atcttccaca cttttagggg
     9301 cggattcggt tttctttgaa acttgcagta cggctttgtg ctgattttcc gccaagctga
     9361 taaaccgctc ttgcaatgaa gcggtctgat ttgccgattt ttttgcaata acttgagggg
     9421 cttttagctc aggctttttt ttttcggttt gagctaaatt tgcctgctgt gcttgtagct
     9481 ttttgcgggc ttcgagggct gccattgccg gtgaaagagt cgcaggagca gacggcgaaa
     9541 tagcggtatc tactgcctgt ggcggttgag caatgctttc aaccgctgtg gtagtattgg
     9601 caacagtaac cgttttttgc tgattttgct caaaattttc tcttagctgg ctaatttgat
     9661 tttgtggttt tgctgtcgta accgctgaaa ccgaatggtt tggttgtgta accttttcca
     9721 ctgcaactgt tgctattttt tctgcctgtt tagggtggaa agccaacgca cgcaaaatcg
     9781 ccatttcaac accggcacgt tgctccggtg caaaaggcaa ctctttttta ctgttgagga
     9841 ttaattgata gaaaaattgc acgtcttcgg gcggaatttg ttttgccaga aaatgcacta
     9901 atgtttcttc ggttgtaggt gttttcacta attgcaacat tgcaattttg tgtaacactt
     9961 ctgccacatc gcttaataat tgttgccaat caacgccttt cgctgcaatt tgctcgatga
    10021 tcgccattgc tttttcaccg tcggcttggg cggttgcttg cactaattct agtggttgat
    10081 tatcgtcaat caaccctagc atttggctga ctatcgcaag cgtaatattg gcattactca
    10141 ttgcaatggc ttgatcggtg aggctgagag agtctcggat actaccttgt gctgcttttg
    10201 ccaacttttc tagtgccaaa ggctcaaacg gaatgttctc tgcatttaga ataaattcaa
    10261 gatgacgggc aatttgcgat tgctctaatg cccgcagatg aaattgcata cagcgagaga
    10321 ggatcgtaat cggcagtttt tgcggatcag tggtagccag caagaatttg acatattcag
    10381 gcggctcttc aagggttttt agtaaggcgt tgaaactatg acgagagagc atatgcactt
    10441 cgtcaattaa ataaacctta aaacgcccaa cggtgggttt gtattgaacg ttatcaagta
    10501 gctcacgggt gtcttccact ttagtacgag aagcagcatc aatttcaatg agatcgataa
    10561 aatgcccttc ttcaatcgct ttacaattcg cacattcacc gcaaggctcg gcggtgatcc
    10621 cgtttacaca gtttaagcct ttggcgaata aacgggcaat agaggtttta cccacaccac
    10681 gagtgcctga aaacaggtaa gcgtggtgca gtctatcttc tcttaagctg ttttcaagag
    10741 cagataaaac gtgttgctga ccaactactt ccgagaagcg ttgcggtctc catttacggg
    10801 ctaaaacttg ataactcatt gatttttcta ttcaatttgg aaatcacaag cggtcatctt
    10861 tccgaaaaat tttgcaaaat tttagcaaaa agccaccgct tgttccccat taatgacctt
    10921 caaagctgac taggctaaag gatttaaccc cttctttttc caaacgctct ttaccaccta
    10981 actcaggcag ccaaatcaca aaggcagcgt gttctacgtt accacctaag cgacgaatta
    11041 gttttgcagt tgcatcaata gtaccaccgg ttgcgagtaa atcgtcgatg accaatacat
    11101 tatcattagc actcactgcg tctttatgaa tttctagcgt gtcttcacca tattcaagcg
    11161 tgtaagattg cgaaatcact tcacgtggta attttttcgg tttacgaacc aacacaaaag
    11221 gcacgcctaa cgctaatgca acaggggcac caaaaataaa cccgcgagat tctgtgccga
    11281 caattttagt aatacctttg tctttaaatt ctgcaacgat ggcatcaatg gtggcttgga
    11341 atgcagttgg cacttctaaa agtgaagtga tatcacggaa gataatccct gctttcggat
    11401 aatctggaat ggatttgata gaagatttaa ttaaatctaa ttggttcatt gtttgaccta
    11461 cgtgtaataa aaaaataact ggaaaactct atagaaaaac agcagaaatt tcaaggagaa
    11521 attgataacc ttacgtttga tagtacagct tacttttcag tttccttttc cctatattat
    11581 agataaatat cttccctgtt tcgtctggtt ttaagcaaac gtaaaatcca aacatactgc
    11641 tcggggtttt tctccacaaa atattcaatt actcggttca tttctcgggc ggattgaatt
    11701 gggtctcctg aaaattcaag cggtggcaaa atttccattt catattttgc tttttccgca
    11761 ttataaatcg agaacattgg gatcacttcc gcatttgcca ctcttgccat tttatttaag
    11821 cccggcaaag tggctttttc ggtggcaaaa aagtcggcat acacacttag ctcttcgccg
    11881 aaatcttcat cgggcagaaa ataaccaaca tcacctttac gcacatcggc taaaaacgct
    11941 ttaatcccat tttgacgagt gtgcattcgc ccacctaaac gctcacgggt aatattccac
    12001 agccagtcca ccaacgcatt acggtgtgga ttgtacattg atgtcatcgg ataaccgagc
    12061 gagaacatcg ccacccccgc catatcaatc gaccaagtat gtggcactaa cataatcacg
    12121 tttttaccgc tctctttggc tttcaccaca ttttcaaagc cggtaaattc acaccgtttt
    12181 tgtaaataag aggccgggcg gattgcagtt tcgccaatcg ccaacatggt ttgtgctacc
    12241 gtgataaaca ttttctcgac cacttcttca cgctttttct cactccaatc gggaaaacag
    12301 taacgcaaat tcactttagc acggtggtag ccttttttat ttttctgctt gagatagcga
    12361 tacgccatct tacccacaaa agcggataat ttatccctaa ttcgcaccgg cacataggct
    12421 aaaatcacta atcctaatac acctaaccat acgccccaat atttcgggtg tagaaaagac
    12481 cataggaatt tgtgcgtata gccgtcttgg gcggtaattc gtgtcattct ataattcctc
    12541 attatttgtc actttctttg cttcgccaaa gaaagtaacc aaagaaaggc aaccctactt
    12601 caccgctatc ttcgcttggt ttgaatttgc ttaacgaaaa aattccaaac tcgccgcttc
    12661 gctgctcaaa caaggaattt ttcctacaaa ttcaaagtcg ttcgggcggt tcagaaggga
    12721 acccggcaga gcatcatttt gcaaaatttt ccaaaaaaat caccgcttgt atggtcggat
    12781 cgggttccct tctgagttgc ccgaacgact tgaaattttt aggaaaataa ctcgagcgag
    12841 agcgaagcga acatcagggt tatttttcgt taagaaaatt tcaaccaagt gaggatagca
    12901 acaaagcagg gtgtgctttc ttttggttac ttttctttgc acaagcaaag aaaagtgaca
    12961 taacacatca tctcttatca ataatattct tcaccgccaa tatcacccca agtccaataa
    13021 aagcccccgg aggtaaaatt gccagtagta aacctgaatc aatatgcaat acatcaatgc
    13081 gtagggcttt tgcccaatcg ccaaggagta gatctaagcc tgaaaacagc gtgccgttgc
    13141 caataatttc acgcaacgcg cctagcacca caaggctaaa agtcattccc agccccattg
    13201 aaaagccgtc aaaagccgag aatttgacct cattttttga ggcataggct tctgctcgtc
    13261 caatcacgat acagttggtt acaatcagcg gaataaaaat cccgagcgat tggtaaacag
    13321 ggaaagcaaa agcattcatt aaaagctgta ctgccgttac caccgttgca attaccatca
    13381 cataaatcgg aatccgaata tcgtgtggag tgattttccg aaacagggaa accgtgatat
    13441 tggtgcaaat tagcacaaac attgttgcca agcctagtcc aagtgcattg gttacgctgt
    13501 ttgaaaccgc cagtagtggg caaagcccta ataattgcac caaagcacca ttatttttcc
    13561 acacaccatc agcgaaaatc gttttccaaa cgctggattg tttcggggca acgtcaatat
    13621 tcgtcacagg gatttgttgt tctctttcca tttctccccc tatttgcacg ctttaaattg
    13681 attaaacatt gtcgggtttt gagccagctc tgtcaccacc catttcgcac tttggcggat
    13741 atgattgacc accgcacgag gtgtaatagt tgcaccggta aattggtcga acttgccgcc
    13801 atcttttttt acattccaat ccgcttcgtt ttctaaacta aaaagttgat tggtaaaaga
    13861 taagatccaa tccgacactc gggtctcaat tttatctccc agccccggag tttctttatg
    13921 ctcaagggtg cgaacgccta aaatgttgcc gttcggctca atccccatca atagcacaat
    13981 atcgccggaa tagccgtccg gagccgttcc ttgaactagg taagcggtca gattttccga
    14041 tttttttgca acataaatac ggttcaaata aggggcattt tcgagctgaa ccagtttgca
    14101 agtcgccaac acatcattat caaaatggct tttcggcaca acctcttcca ataatttgcg
    14161 ttgttgcatt gcggttacat catcaatctt gcctttggta agcaggtaca caccggttga
    14221 aacagcggtg caaagcaagg caataaagcc taaaattaag gcgtaattta aggtaatttt
    14281 tgaggtgttc attatctgtt atccaatttt gtgccgtata atctcggctg cgtataatgg
    14341 tcgattaacg gtacgcaaat gtttgccaat aacactgaaa atgcaatcgc atcagggtaa
    14401 tttccgtagt agcggattag ataaaccaat aatcccacca agccaccgaa aatcagtttt
    14461 cctcttgggg taatggaggc tgttaccggg tcggtcgcaa taaaaaatgc cccgaacatc
    14521 atcgcaccgc taaagaaatg gctcacaaaa tgcaagtgcg attgttggct aaacagctcg
    14581 gtgaatccac taaaaaaggc aaaagttgcc aacattgcta ccggaatttg ccaatggata
    14641 atccgtttat aaatcaacac caaaccgccg aataagaacg caaggttcag ttgtagccaa
    14701 ccggtcgcaa acagcccgtt gaaaatcggc gtattcatta ccgcgtcaaa acctgatttt
    14761 gcaaggctgc ttttcatact atcaagcggg gtagcttgtg caatgccatc aacactatta
    14821 actagctgat gaatactaaa accatcgcta gttaccccgt aaaaaatcaa cgaaatcgca
    14881 tcacgaaatg tcggtggttc acttaataac tcaatcggca ctatccacgc cgtcatttgc
    14941 accgggaaag aaaccaacaa caacgcatag ccaaccattg ccgggttaaa tagattctgc
    15001 cccaagccac cataactgtg ttttgccaat aataacgcca caatcacgcc aatcaacaca
    15061 agccaataag gagcataagg cggaatcgac atcgccaaaa tcaaggcggt taaaatacct
    15121 gataagtcag ccaaatagaa agcggttgtt tttttgcgta attttgcaat cccgatttca
    15181 atcacaatcg caaggctaac ggcaagcaac gtttgaatca gcacaccata gccgaaataa
    15241 taaagctgaa ccccaaaagc aggtaacatc atcgcaatca cccacagcat aaaattcgca
    15301 gtgagattgc tcgaatgagt gtggggggaa ctgaccattt taaacatcta taaaaccttt
    15361 ttagtaaaaa attgcaaaaa aatgaccgct tattaaagtc tcggcaaatt caaattaaag
    15421 cgtattgcca gcaggcggat aataattacg gtgaacacgg tggcaaggta aacccaatcg
    15481 ctttcgagcc caactgagtt tgcagccaca aaaatcacac caccgataag gctggcggtc
    15541 acatacactt ctttttgcaa aatgatcggc acttcgttgc gtaaaatatc acggattaag
    15601 ccaccaaaac agcctgtcac accgcccaga gccacacaga tcagtgggtg caagccgaaa
    15661 tccaagcctt tttgcacgcc aatcacggta aatacgccaa gcccgatggc atcaaacacc
    15721 agcaagccgg tttgccaact tttgcgggaa atttggttgc ggaaaatagc ggtaatcacc
    15781 actgcaaggg taatcatcag cacatagatc ggttgtttca tccaaaacac cggcgtggag
    15841 ccaatcatca tatcccttag cgtaccgccc ccgaccccgg tcacaaacgc taaaataaac
    15901 ataccgaaaa tgtccatttt gtgctggcgg gcagcaattg cccccgaaat cgcaaacacg
    15961 atagtgccga ttaagtcctg aataaacagg aacgaccacg gcaatgccgg aattagctcg
    16021 ctaaacattg ttgcttttct cctgctgagc ggcttttttc gctttagctc tggcgatggc
    16081 ggccgcaacg gcggctttgc gtgggtcttc gctttccgtt ttgggcgaat ggttattcgc
    16141 ccctacagat ttatccgatg tagtttcgtt cattgattgt aggggcaaat cattatttac
    16201 cccaatcaca gcattggcaa tatcttccgg tttttcgacc gcttgttgag cttgtttttt
    16261 cgctttagct ctagcgatag ctgctgcaac ggcggctttg cgtgggtctt cgctttctgt
    16321 ttcgggcgaa tggttattcg cccctacaga tttatccgat accgtttcgt tcattgattg
    16381 taggggcaaa tcattattta ccccaatcac ggcattggta atattttctg atttttcgac
    16441 cgcttgctgt gcctgttttt tggctttggc tcgggcaagg gcagccgcaa cggcggcttt
    16501 gcgtgggtct tcgctttctg cttcgggcga atagttattc gcccctacag atttatccga
    16561 tgcagtttcg ttcattgatt gtagaggcaa atcattattt gccccaatca aggcatttgt
    16621 aacattttcc gatttttcga ccgcttgttc tgcctgtttg gctaaacgtc tggctctgcg
    16681 ttgtgccatt aaatcgctgt tatcaggctc gccgttaggt tttacctgta cttctgccgg
    16741 tatttcttgg actgtttcaa ccgctttttt cgctttcagg cgttcaagag ccgcttttac
    16801 aggatcaaca ccacctgcat ttgccacttc ttcacggcgt ttttccgccg cttggctaat
    16861 gcgagcagtt ctggcatctc gttctttttg taagcgagct tctctcgcct caaagcggat
    16921 tttagcctct tccgctttgc gggctttttc ctcaatttcc tcgatttttg ctttttcttg
    16981 gcggaaatat tggattaacg gaatgtagct tgggcaaacg taagcacaaa cgccacactc
    17041 aatgcaggca tctaaatggt attctttcga tttatcgtga tcttctgcac gggcaaacca
    17101 ataaagttgc tgtggcaata accccaccgg gcaagcatcg gaacagcttg aacagcggat
    17161 acaactacgc tccggttcag gtggtgcata ttcaaaatga tcaggggcaa tcaagcagtt
    17221 cgcagttttg gtaatcgggg cttgcaatgc aggcaaaata aagcccatca tcggtccgcc
    17281 taaaaacacc ggaaagcgtt tatcggcttg ataatctacc tgctccaaca agtgctgaat
    17341 tggcgtgcct aatcttgccc acacgttccc cttgttgcga attttatcgc ctgtcagcgt
    17401 cactacccgt tcaatcaaag gttcatcatc aataattgcc cgtttaaccg caaacgccgt
    17461 gccgacattg tgcatcacaa tgcccatttc aatagtgcgt ttgccagccg gaatctcaag
    17521 tccggtcaac acttgaatca gctgatcaga agctccggag ggatatttag tcgggatcgc
    17581 ccgcacaaac atatcgttcg agccttttaa agcggtttct aaagcttgaa tagcgtgcgg
    17641 tttgttgtct tcaatcgcaa tcaccacttc ttccgggcga agcacataac gcagaatgcg
    17701 aataccttcg ataagatccg cagtgaaatc ttgcattaag cgatcgtcac aggtgatgta
    17761 aggctcacat tctgccccgt taatcaccag taatttacag cgtttatccg ccaaacttaa
    17821 ttttgttgcg gttgggaata ccgcaccgcc taaaccggca atgccatatt ggtaaacttt
    17881 ttggataatt tgatcgcttg ttaggcttaa aaaatcctca atcggctggc gttccaccca
    17941 tttatcttta ccatcggttt caataatcac cgttatttcg ggcaaacctg aggcgtgagc
    18001 ggaaacataa ggctcaatcc caatcacccg cccggaggtt gggctgtgta cgggcagttg
    18061 acggaagtga tcgcctttcg tgagcggctg ccctttcaat accacatcgc cgactttgac
    18121 taataattcc cctgcccagc cagaatgttg aaccagtggc acatagaaaa acttcggtaa
    18181 atttaaggtg cgaattggct tgctgtttga ttgggattta ttttccatcg ggtgaatacc
    18241 gcccgggaaa tcccacagtt tacccgtttc tttattttgg cggattcgct caatcactaa
    18301 attaggattg ctcatttttg cctccgccgg taactaattt tctctgcaat tcagtggtat
    18361 tcacaatcgg aataattaaa tcttggtcaa atttccagtt ccaagattgg gttgtcggtt
    18421 taattggtcg catttcaata cagttggtcg ggcaaggggc gacacaaagt tcacagccgg
    18481 tgcaaagatc cggaataatg gtgtgcattg ctttattcgt gccgataatc gcatcaaccg
    18541 ggcaagcctg aatgcactta gtacagccaa tgcagagatc ttcaatcaca aaagccactt
    18601 tcatctcagg ctctgccata ccttccattg gcggcacttc taccccaagc aattcggcaa
    18661 gattcaccac taaaggttgt ccacccggca cacatttagt gatcacatca ccattagcaa
    18721 tcgcctcagc ataaggctta cagcccgggt agccacattg accgcattgg ctttgtggta
    18781 aaagggcatc aatttgatcg acaatcgggt cggattcaac tttcagttta atcgaggaat
    18841 agcctaaaac cgccccgaaa atcagtgcga tcacagcaat agcgataaga atataagcga
    18901 taattggcaa atcaagcatt agagtttcac caatcctgta aagcccataa aggcaagcga
    18961 catcaagcct gcggtaatca gagcaattga tgctccttgg aacggacgag gcacatcagc
    19021 ggcagccaaa cgctcacgca gagccgcaaa taaaactaac accagcgaga aaccggcagc
    19081 ggctccaaaa ccataaagaa cagattccac caagttattg gctaaattca cgtttaataa
    19141 tgccacccct aatacggcac agttggtggt aatcagcggt aaatagatcc caagcaagcg
    19201 ataaagtgtc gggctggttt tatgcacaat catttccgtt aattgcacga tcaccgcaat
    19261 cactaaaata aacaccaagg tacgcaaaaa ttgagcgttt aacggctcaa gcaaataggt
    19321 ttccatcaaa taagcagaga gcgaggcaac cgtcagcaca aaggttgtcg ccaaccccat
    19381 accaatagca gtttccacct ttttcgacac tcccataaac ggacaaagcc ctagaaattt
    19441 aactaagaca aagttattaa taagggcggt gctgatgacc aacagaatat aatcgaccat
    19501 aaattccaca aaattaaata tacaagcggt caaaaacgca ttttattttg caaaaaacag
    19561 agaaaatctg accgtttgtt aaagcatctc attaaaaata aacgttatat tatctcttgt
    19621 tttcggctca ttcacaataa gaaatcggag gtacttctag taaacatacc atatcaaata
    19681 tgatcttgtt acctttgttt ctatctctgg tagaatggag aatgtgggga ctaagctata
    19741 cagcatgaaa ggtgaaagga gcttgatttt ctaagttaat cctaaaaagt ctcactcctt
    19801 tgatatagag gatattagaa taacaaccaa ttaat
//
LOCUS       DANLXD010000045        19753 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.045, whole genome shotgun sequence.
ACCESSION   DANLXD010000045 DANLXD010000000
VERSION     DANLXD010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19753)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19753)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19753
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.045"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            245..2854
                     /gene="adhE"
                     /locus_tag="PXD18_001310"
                     /gene_synonym="adhC"
     CDS             245..2854
                     /gene="adhE"
                     /locus_tag="PXD18_001310"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HDL6301747.1"
                     /translation="MAKNTQPFDAQAEVNELVEKGLKALDEFRKLNQEQVDFIVAKAS
                     VAALDKHGILAMHAYEETGRGVFEDKATKNLFACEYVVNNMRHLKTAGVISEDDVTGI
                     TEIADPVGVVCGITPTTNPTSTTIFKALIALKTRNPIVFAFHPSAQQSSAHAAQIVRD
                     AAVAAGAPENCIQWITQPSMEGTSALMKHPGIATILATGGNAMVEAAYSCGKPALGVG
                     AGNVPAYVEKTAKLKQAVYDIVMSKSFDNGMICASEQAAIVDKEIYAEFIKEMQSYGV
                     YLVNKKEKALLEKYIFGIDKAKDENCSGAKLNSAVVGKPAAWIAEQAGFKVPEKTNIL
                     LAECAFVGEAEPLTREKLSPVLALLKSDSTEHGLELSEAMVNFHGLGHSAAIHTENKA
                     LAKTFGERVKAIRVIWNSPSTFGGIGDVYNSFLPSLTLGCGSYGKNSVGNNVSAVNLI
                     NIKRVGRRRNNMQWFKVPSKIYFERDSIQYLKSMHDVHKVMIVTDRSMVDLGFVDRIT
                     EQLRQRRNQVMIQFFTDVEPNPSLQTVQRGTELMRSFQPDTIIALGGGSPMDAAKIMW
                     LFYEQPEVDFRDLVQKFMDIRKRAFKFPQLGRKAKFVGIPTTSGTGSEVTPFAVITDG
                     DIKYPLADYSLTPTIAIVDPALVMSVPSHVAADTGLDVLTHATEAYTSILANDYTDGL
                     ALQAIKLVFENLEKSVKEFDETAREKMHNASTMAGMAFANAFLGICHSMAHKIGGKFH
                     TIHGRTNAILLPHVIRYNGTRPTKVATWPKYTNYVADVRFQDIARMLGLPAETPEQAV
                     EAYAQAVHDLAVRCGVKMSLREQGVDEQAFLNARRELALHAFEDQCTPANPRLAMIED
                     MEAIMTKAYYGKE"
     gene            3001..3897
                     /locus_tag="PXD18_001311"
     CDS             3001..3897
                     /locus_tag="PXD18_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HDL6301748.1"
                     /translation="MQITILDGGISRELMRRNAPFHQPEWSAAALYEGPHFVQAVHED
                     FIAHGAEVITTDSYAVVPFHIGEKRFAADGKMLADLAGRLAKQAVKNSGNIATQIAGS
                     LPPMFGSYRADLIQMERFAEVAQPLIDGLSPYVDIWLCETQSAIIEPISIKALLPKDN
                     RPLWVSFTLTDDEPTTEPQLRSGESVKQAVEEMVKLGVQAILFNCCQPEVIGEALSVT
                     QKTLAELKATHIRTGAYANAFAPQPKDATANDGLDEVRQDLTLEAYLGWAKKWTEQGA
                     TIIGGCCGIGVEYIETLAKNLK"
     gene            3907..5316
                     /locus_tag="PXD18_001312"
     CDS             3907..5316
                     /locus_tag="PXD18_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDL6301749.1"
                     /translation="MSNKKIGLISLTALVLSSMIGSGIFSLPQNMAAVAGAEAITIGW
                     LITGVGIIFLGLSFFFISRLRPDLDGGIYTYAREGFGELMGFMSAWGYWLCATIGIVG
                     YLTVAFEGLGVFTDNPNTVIFGQGNTLASFIGSSIIVWLVHALIAGGIKEAAFVNLIA
                     TFVKVAPLILFIGLGIWYFDVDLFNSDVKATALNNSVSDQVKSTMLITLWVFTGVEGA
                     SVLSAHAKKRSDVGLATVLGIIIALALYVAITILSLGILPRETIANMANPSMGPLLDA
                     MMGPTGKVIITACLIVSVLASYISWTMYSAEVPYRGSKNGAFPKILDKVNKNGTPINS
                     LWFTGFIVQFCLVLVFVFEQSYNTLLLISTSMILIPYFLIGAYLFKLAIQTNATWYIK
                     LTGFMAALYGLWIVYAAGLEYLLLSVVLYVPGILLFLYSNYKFNGRLTLSTAEKVILI
                     VLLVIFGYAVIELPALLAA"
     gene            5423..6646
                     /locus_tag="PXD18_001313"
     CDS             5423..6646
                     /locus_tag="PXD18_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF711 family protein"
                     /protein_id="HDL6301750.1"
                     /translation="MQTYQHKALCRVRTITLFLSLTKDKLQWETALNAAKAEFDLLVP
                     AIQTQGYHIQSIRIVTNSFGEYLDLTNIETAKQDLAYLKQLLTQLNDSGLRIRFAIGE
                     AKTPHELALLPELILNYGDLSNACVNIEPDEFGILDNETILQSAQIIKQIAEITPRGE
                     GNFNFTVNFNCKPFIPYFPASYHSSKLPNSFVIGLETPDLLVAVLKELKASPHNDFYR
                     QCYETMSQALQYHVDEVLEAVKSVQHKLQFAFAGIDSSAAPSKNCASMTEVYELMGVP
                     FFGAAGTVEASSLLTKVFKSIKHVPLVGFSGLMLAVTEDLGLAAGTHKAQFDIRALLT
                     YSAVCGIGLDTVPISNEATVEQIAALMRDTGTMAFRLNKPLTVRLFPIPNKSAGEVTE
                     FESDDLCNCRILAVP"
     gene            complement(6684..7880)
                     /locus_tag="PXD18_001314"
     CDS             complement(6684..7880)
                     /locus_tag="PXD18_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDL6301751.1"
                     /translation="MKQVIRFIVFSTLSLFSFSTFAKTIVAIDAGHGGKDPGAIGKNL
                     GILEKSVTLAISKELKALLDADPNFKAVMTRSGDYFIQLPQRTEIARKHRADLLVSIH
                     ADSSPRGDSLKGASVWVLSNSRASDEMGKWLEDHEKQSELLGGAGSVLSSNNERYLNQ
                     TVLDLQFSHSQRAGYELGKSILAKMSNVAALAKSSPQHASLSVLRSPDIPSVLVETGF
                     LSNSTEEAKLASANYRKQVARAIYNGLVAYRAKNAVASSSVSKKSDKEDKQNKKEEKT
                     AKADLTKKPASEKQEKNTQSDKTKLKEKSKKEDKKEDSAKTNKKKEQQLKEKTALEKD
                     QKNQSKKSDSQREIKVSNSGYHIVQQDETVYSIARAYGTTPQKISELNNLKNYQITVG
                     KKLKVK"
     gene            complement(7900..8391)
                     /gene="tsaE"
                     /locus_tag="PXD18_001315"
     CDS             complement(7900..8391)
                     /gene="tsaE"
                     /locus_tag="PXD18_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HDL6301752.1"
                     /translation="MTDSLSFYCEDETKLLEFGQSFALELKKYLLQDQAHSLVVYLNG
                     ELGAGKTTLTRSIVRAFGHQGNVKSPTYTLVEEYQLPPFSLYHFDLYRLADPEELEFM
                     GIRDYFKPQTLCLLEWAVKGKGMIPEADFVIQIDYKNDGRQISLLPQNQTAVDILVNF
                     HQK"
     gene            complement(8391..8945)
                     /gene="orn"
                     /locus_tag="PXD18_001316"
     CDS             complement(8391..8945)
                     /gene="orn"
                     /locus_tag="PXD18_001316"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HDL6301753.1"
                     /translation="MAQNEQNLIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGP
                     VLAVHQTDDLLEKMSDWCVKTHTANGLIERVKASKLTERAAELQTLDFLKRWVPKGAS
                     PICGNSIAQDKRFLYKYMPDLADYFHYRHLDVSTLKELARRWKPEILDKFSKGNTHLA
                     LDDIRESINELKFYREHFIQLDQK"
     gene            complement(8955..9434)
                     /gene="coaD"
                     /locus_tag="PXD18_001317"
     CDS             complement(8955..9434)
                     /gene="coaD"
                     /locus_tag="PXD18_001317"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HDL6301754.1"
                     /translation="MSYNVIYAGTFDPITNGHLDIICKASHLFGKVIVAVAQNPSKQP
                     LFSLEERVELVKQSCTQWQNIEVIGFSGLLADFAKQQNAKALIRGIRGADDIDYEIQL
                     AQLNYKLSGDLETIFFPPSIEWRYLSSTMVREIYRHNGDISQFVPQAVKNALKIAKV"
     gene            complement(9436..10716)
                     /gene="waaA"
                     /locus_tag="PXD18_001318"
     CDS             complement(9436..10716)
                     /gene="waaA"
                     /locus_tag="PXD18_001318"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HDL6301755.1"
                     /translation="MLRLLYICLSYLLQPVVLLLMWYKGRKQPAYRKRLWERYGIYDE
                     SEKPKAKGVVIHAASVGEVIAATLLIKAVSKQYPELPLIVTTVTPTGSGRVQAAFGNS
                     VSHFYLPYDLPDAIERFLNFIDPKLMIVIETELWPNLIRKVNIRKIPFVIANARLSPR
                     SAKRYGWVKGSIKDMLNQISLIMAQDEVSRDRYLALGYAPAKMVNTGNLKFDLEITPQ
                     LHQSVIKTKASLNLTERPIWIAGSTHEGEEKLILDAHKLLLEHYPNLVLILVPRHPER
                     FGLVELLIQKSDLNYVKRTENKTLSQNTQVMLGDTMGEMMLLYGLSDIAFVGGSLVKH
                     GGHNPLEPIAFNIPVVSGLYTYNFPEIFEKLREVKGVIEIESSVEALTESIQLLLKQP
                     QIGQEIAKSGLSVLQENQGALKRHLDLLASYLEK"
     gene            complement(10896..12275)
                     /gene="yegQ"
                     /locus_tag="PXD18_001319"
     CDS             complement(10896..12275)
                     /gene="yegQ"
                     /locus_tag="PXD18_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HDL6301756.1"
                     /translation="MTLKYAKPELLSPAGSLKNMRYAFAYGADAIYAGQPRYSLRVRN
                     NEFNHANLKVAIDEAHALGKKFYVVVNIAPHNSKLKTFIKDLKVVVDMKPDALIMSDP
                     GLIMLVRENFPEMDIHLSVQANAVNWATVKFWRQMGLTRVILSRELSLEEIEEIREQV
                     PDMELEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYKMEEGKIDEVGQI
                     VPKYEPEIEVKNVAPTLGNGEATDKVFLYTESQRPDEQMTAFEDEHGTYFMNSKDLRA
                     VQHVERLTQMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDESLMDTLESL
                     AHRGYTEGFLRRHTHDEYQNYEYGYSISERQQFVGEFTGKRNAEGLAEVAVKNKFLVG
                     DSVEMMTPKGNIVFKIERMLNRKNENVDAALGDGHFVFLDVPADIELDFALLMRNLVN
                     TNTRNPHQA"
     gene            12403..12774
                     /locus_tag="PXD18_001320"
     CDS             12403..12774
                     /locus_tag="PXD18_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301757.1"
                     /translation="MKLKYLLATTLLAFSTFTAAQSIKTEMMQMNMQANKLMRAESAE
                     EFSEIANDFIIITEKTKGIFPNSVEGDKAAQEDYQAGMQKLIDMVNQASEKAQAGELQ
                     EAKMLISELEMIKREYHKKYK"
     gene            complement(12813..16289)
                     /gene="dnaE"
                     /locus_tag="PXD18_001321"
     CDS             complement(12813..16289)
                     /gene="dnaE"
                     /locus_tag="PXD18_001321"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDL6301758.1"
                     /translation="MSDCRFVHLKVHSDFSMINGLAKVKSLVKTAAANNMVAMGLTDF
                     INFCGLVKFYGEALGAGIKPIIGADVYVRTESGNEDYFELTLLAKNNKGYHNITQILS
                     KAYQQGYVEFPMVEREWLAELNEGIIILSGGRMGDVGKALLKENRQEAEEKLAFYQQY
                     YPNHFYLSVCRTGRADEERYIKQAVEFSQKNAIPLVAVNDVVFLKEDDFDAHEIRVAI
                     HDSYTLDDPKRPKKYSPKQYFRTEEEMCKLFADLPSALANTVEIAKRCSVTVRLGEYF
                     LPNFPTGELSTEDFLVKKSKEGLEERLEFLFPDPEERANKRSVYDERLQVELDVINQM
                     GFPGYFLIVMEFIQWSKDNDIPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLN
                     PERVSMPDFDVDFCMDGRDRVIEHVAETYGRQAVSQIITFGTMAAKAVIRDVGRVLGH
                     PYSFVDRISKLIPPDPGMTLEKAFAAEPKLPELYEADEEVKDLIDMARKLEGVTRNAG
                     KHAGGVVIAPTAITDFSPLYCDSEGLHPVTHFDKNDVEYAGLVKFDFLGLRTLTIIKW
                     ALEMINERLAREGKEPIRIETIPLDDKKSFALLLAAKTTAVFQLESRGMKDLISRLKP
                     DCFEDIIALVALFRPGPLESGMVQNFIDRKHGKEEVSYPDPQYQHECLKPILEPTYGV
                     IVYQEQVMQIAQELAGYTLGGADLLRRAMGKKKPEEMAAQREVFEKGAEAKGIDGKLA
                     GQIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTSEMDNTDKIVG
                     FYDECMNMGLTVVPPDVNSGKHRFSVNEKGEIVYGLGAIKGVGEGPIEAILAARQKEG
                     KFKDLFDLTARVDLKKINRRTFESLIMSGAFDKLGPHRAALMKNLEDALKASDQHAKM
                     EELGQSDMFGVLTETPEEVQNAYANTPKWSEQVILDGERATLGLYLSGHPIGRFLKEL
                     SHYAPNRLNELQPTFRGQMTTVSGIVMASRVAVTKRGSRIGIATIEDRSGKLDITLFS
                     EALENFGHLMQQDQIIVATGSVQFDDFSGGLKMSAREVLSLDEARGRFAKSLALAISK
                     EQLSADFIKKMTAIITPHKEGTLPLHFYYQSPEGRVLLKGGVEWRISPNEAMFSELKA
                     LLGENSVELEFE"
     gene            complement(16514..17611)
                     /gene="lptG"
                     /locus_tag="PXD18_001322"
     CDS             complement(16514..17611)
                     /gene="lptG"
                     /locus_tag="PXD18_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HDL6301759.1"
                     /translation="MQFFSMNILERYIGKTILSAIFLTLFMLIGLGAIIKFVEEFRDV
                     GRGSYDGLKAAYYTFLTIPRDIETFFPIAALLGSLLGLGNLASLSELVVMQASGFSRF
                     RIGLAVMKTALPLVIFTMIIGEWGVPQTEQFARNMRSIAQSGGSMLATKDGFWAKDGN
                     SFIYINHIKNEKSLDNVLIYQFGEGQNKRELQSVLKARTANYSDEKGWVLSKVEKSTV
                     GENQIQQAKQPDQVWQTSLTPSKLGIVSLKPESLSISGLADYVGFLKDTGQDPKRFEI
                     TFWRKVFQPISMAVMMLLAISFIFGPLRSSTMGAKIVIGIVAGFMFYVANIVFGNLSL
                     IATWLPIPVGALIPSLLCLIIVWWLLSKKRD"
     gene            complement(17611..18720)
                     /gene="lptF"
                     /locus_tag="PXD18_001323"
     CDS             complement(17611..18720)
                     /gene="lptF"
                     /locus_tag="PXD18_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HDL6301760.1"
                     /translation="MILSRYLTKEIFKSQLAILFILLLIFFCQQLVRVLSSAVSGKVP
                     ADLVVSLLGLGMPTMAQLMLPLSLFIALLLTLGRFYAESEITVMRACGIGQGLLVKVA
                     MFLSIFTTALAVYNVFWLTPWAINKQSEMLAEAKANPRFAALSAGQFMSAGGYVLFID
                     KIENNSLNDIYVFQPEQQKKNKPSVVVAESGTLQGLPNGDQVLTLAESKRFEGTPQSA
                     DFRISHFENYSAYLGYQDVESDEKLVQRADFKKLMETKTPEAKAELHWRLALILAVPL
                     MALLAVPMSSVNPRQGRFAKLLPALLLYLIYFLLQSSLKSSGASGKLNAEVLMPLVSV
                     AFLVLGVILNAWDSKFMSKLRYQFGAKKLTNKAVA"
     gene            complement(18894..19691)
                     /locus_tag="PXD18_001324"
     CDS             complement(18894..19691)
                     /locus_tag="PXD18_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301761.1"
                     /translation="MRFWGKTFVVGLIGLGTQNTIFANDDAQISRYEQAKLRLSYDGN
                     VGNLLQQLSQRLKVGFIAYDVDITRKISLQNETETAIKTINEQIESQLTNIDVRFEKI
                     GERLFLVVSAKDVAPLLQNEPKEVQFVGDVIFDGEPNLTEQAQSTAEATKVQNILNIA
                     TNQEKIMAAKGKKAPQYKTVTKDNIGLKNIRVTALGTFLVFDTSVDAAKLRVKGNFED
                     IAQGENIIAILHQNTEAPPKIEIEDSQGKKLILEAHKATSSKKSKKQ"
BASE COUNT         5672 a         4475 c         3821 g         5785 t
ORIGIN      
        1 ctgaactgcc aaaaataatc gtggatttcg ctttgcattt aatcaaaaat ccgacttttt
       61 ctcaaaatgt atcaatgtct atatgactaa atattttata gcatatatac aacgttaaaa
      121 aagttgatat agatcaaagc aaacataaaa cattattaat ttttaacgac aaaataactc
      181 ttttgggtaa taatttcatc agttaaaaaa attatcaaat ttaaatttta tgaggaacca
      241 aactatggct aaaaatacgc aaccatttga tgcccaagca gaagtgaatg agcttgttga
      301 aaaaggctta aaagcccttg atgagtttag aaaactcaac caagaacaag tggattttat
      361 tgtcgctaaa gcctctgttg ctgcccttga taaacacggt attttagcaa tgcacgctta
      421 cgaagaaacc ggacggggtg tgtttgaaga caaagccact aaaaacctgt tcgcctgtga
      481 gtatgttgtc aataatatgc gacatttgaa aaccgcaggg gtcattagtg aagatgatgt
      541 caccggtatt accgaaattg ccgaccctgt cggtgttgtc tgcggtatca ccccaaccac
      601 caacccaacc tcaaccacca ttttcaaagc gttaatcgcc cttaaaaccc gtaaccctat
      661 cgtttttgct ttccacccgt ctgctcaaca atcttctgcc cacgctgctc aaattgtgcg
      721 tgatgctgcc gtggctgccg gtgcaccgga aaactgtatt caatggatta cccagccttc
      781 aatggaaggt acatctgctt taatgaaaca cccgggcatt gcaactattt tagccaccgg
      841 cggtaatgca atggttgaag ccgcttactc ttgcggcaaa ccggcattag gagttggtgc
      901 aggcaacgta ccggcttatg tagaaaaaac cgctaaatta aaacaagcgg tgtatgacat
      961 tgtaatgtca aaatctttcg acaacggtat gatttgtgcc tctgaacaag cggcgattgt
     1021 agataaagaa atttacgctg agtttattaa agagatgcaa tcttacggcg tctatttagt
     1081 gaacaaaaaa gagaaagcct tattggaaaa atacattttc ggtattgata aagccaaaga
     1141 tgaaaactgc tcaggtgcaa aactcaattc agcggtggtt ggcaaaccgg ctgcgtggat
     1201 tgcagaacaa gccggcttta aagtaccgga aaaaaccaat attctgttag ccgaatgtgc
     1261 ctttgtgggc gaagctgagc cacttacccg tgaaaaactt tcgcctgtac tggctctgtt
     1321 aaaatccgac tccaccgaac acggtttgga attgtctgaa gcgatggtga atttccacgg
     1381 tttagggcat agtgccgcca ttcataccga aaacaaagcc ttagccaaaa cctttggcga
     1441 acgggtaaaa gccattcggg tgatttggaa ctcaccatca acctttggcg gtatcggtga
     1501 tgtatataac tccttcctgc catcgcttac gctgggctgt ggttcctacg gtaaaaactc
     1561 tgtaggtaac aacgttagtg cggtgaattt aatcaatatc aaacgtgtgg gcagacggag
     1621 aaataatatg caatggttta aagtgccatc aaaaatctac tttgagcgtg actcaattca
     1681 atatttgaaa tcaatgcacg atgtgcataa agtaatgatc gtaaccgacc gctcaatggt
     1741 tgatctcggc tttgtggata gaattaccga acaacttcgc caacgtcgca accaagtgat
     1801 gattcagttc tttaccgatg ttgaaccaaa cccaagcctg caaaccgtac aacgtggtac
     1861 agaattaatg cgtagcttcc agcctgatac tatcatcgca cttggtggtg gttcaccaat
     1921 ggatgcagcc aaaattatgt ggttattcta cgaacaaccg gaagtcgatt tccgtgattt
     1981 agtgcaaaaa tttatggata tccgcaaacg tgcattcaaa ttcccacaat taggcagaaa
     2041 agcgaaattt gtcggcattc caaccacctc cggaacaggc tctgaagtca caccgtttgc
     2101 agtaattacc gatggcgata ttaaatatcc gctcgctgac tactcgctta ccccaaccat
     2161 tgcgattgtc gatcctgcgt tagtaatgtc tgtgccgtct cacgttgctg ccgacaccgg
     2221 tttagacgta ttaactcacg ctaccgaggc ttacacatcg attttagcca acgactatac
     2281 cgacggctta gccttgcaag ccattaagtt agtgtttgaa aacttggaaa aatcggtcaa
     2341 agagtttgat gaaaccgccc gtgaaaaaat gcacaatgct tccacaatgg cagggatggc
     2401 atttgccaat gccttcttag gtatttgcca ctcaatggca cacaaaatcg ggggtaaatt
     2461 ccacaccatc cacggtcgaa ccaatgcgat tttactgcca cacgttattc gctataacgg
     2521 cacacgccca accaaagtgg caacttggcc aaaatacacc aattatgtcg cagatgtgcg
     2581 tttccaagat attgccagaa tgcttggctt accggcagaa accccggaac aagcggtgga
     2641 agcttacgcc caagcggtac acgatttagc cgttcgttgc ggcgtgaaaa tgtcgcttcg
     2701 tgagcaaggc gttgatgagc aagccttctt gaatgcccgc cgtgaacttg ccctacacgc
     2761 atttgaagac caatgcacac cagcaaaccc acgtttggca atgattgaag atatggaagc
     2821 gattatgact aaagcctact atggcaagga ataaagcaca atttaatcgt taaacttact
     2881 aaatggccgc ttgcaagcgg tcatttttct tgaaattttt acttttccct tcacaaaata
     2941 ctttcgctct tttacaaagc atagtatttt tatcgctcct tttatcttac aggaaatact
     3001 atgcaaatta cgattttaga cggcggaatt agccgtgaat taatgcgtcg caatgctcca
     3061 tttcatcagc ctgaatggtc tgctgccgct ttgtatgaag gcccacattt tgtgcaagcg
     3121 gtacacgaag attttatcgc tcacggggca gaagtgatta ctaccgacag ctatgcggtt
     3181 gtgccgtttc acattggcga aaaacgcttt gcggcagacg gcaaaatgct tgccgattta
     3241 gccggtcgcc ttgccaaaca agcggtcaaa aattcaggaa atattgcaac tcaaattgca
     3301 ggctcacttc caccaatgtt tggctcttac cgtgccgatt taattcaaat ggaacgcttt
     3361 gctgaagtcg ctcagccttt aattgacggg ctttcgcctt atgtggatat ttggctttgc
     3421 gaaacccaaa gtgcgattat tgagccgatt tccatcaaag cattattgcc gaaagacaac
     3481 cgcccgcttt gggtctcttt taccctcacc gatgatgaac caaccaccga gccacaactt
     3541 cgctcgggcg aaagcgttaa acaagcagtc gaagaaatgg tgaagttagg cgtgcaagcg
     3601 attttattta actgctgtca gcctgaagtg atcggcgagg cattaagtgt aacccaaaaa
     3661 actttagccg aattaaaagc tacccatatt cgcacaggag cttatgccaa cgcctttgct
     3721 ccacaaccaa aagatgccac cgccaatgac ggtttagatg aagttcgcca agatttaacc
     3781 ctggaggctt atttaggctg ggcaaaaaaa tggacggaac aaggggcaac tattatcggt
     3841 ggctgctgcg gcattggggt tgagtatatt gaaacgctgg caaaaaattt aaaataagga
     3901 aatcgaatgt caaataaaaa aataggatta atttcactca ccgccttagt gctaagctca
     3961 atgattggct cggggatttt cagcttaccg caaaatatgg cagccgttgc cggagcagaa
     4021 gccattacca ttggctggct gattaccggt gtcggcatta tctttttagg tttatcgttt
     4081 ttctttattt cccgcttgcg tccggattta gacggtggca tttacaccta cgcacgggag
     4141 ggttttggcg agctgatggg ctttatgtca gcgtggggct attggctctg tgccaccatt
     4201 gggattgtag gatacctcac cgttgctttt gaaggtttgg gtgtatttac cgacaacccg
     4261 aacaccgtga ttttcgggca aggtaacacc ctcgcctctt ttattggatc ttcaatcatt
     4321 gtgtggctgg ttcacgccct catcgcaggc ggtatcaaag aagctgcctt tgtaaactta
     4381 attgccactt ttgtgaaagt cgctccgctc attctgttta tcgggttagg catttggtat
     4441 ttcgatgtgg atctgtttaa tagcgatgtt aaagccaccg cacttaataa tagtgtaagc
     4501 gaccaagtga aaagcacaat gttaatcacc ttatgggtat ttaccggtgt ggaaggggct
     4561 tctgtgctgt cggctcacgc gaaaaagcgt tctgacgtgg gactggcaac cgtattaggt
     4621 attattattg cacttgctct ttatgtggca attaccattc tttcactcgg aattctgcca
     4681 cgggaaacta ttgccaatat ggcaaatccg tcaatggggc cgttgctcga tgcaatgatg
     4741 ggcccaaccg gcaaagtgat tattactgct tgtttaattg tatcggtgct tgcctcttac
     4801 attagctgga cgatgtattc ggcagaagtg ccttatcgtg gctcaaaaaa cggggctttc
     4861 ccgaaaattt tagacaaagt gaataaaaac ggcacgccga ttaactcact ctggtttacc
     4921 ggctttatcg tgcaattttg cttggtgttg gtgtttgttt ttgagcaaag ctataacacc
     4981 ttattgctga tttccacctc gatgatttta attccctatt tcttaatcgg ggcttattta
     5041 ttcaaattag cgattcaaac caacgccact tggtacatta aactcaccgg ctttatggca
     5101 gccctttacg gattatggat tgtctatgcc gcaggactag aatatttgct gctttcggtg
     5161 gtgctttatg tacccggaat tttactcttc ctctactcca actataaatt caacggcaga
     5221 ttaacccttt caaccgctga aaaggtcatc ttaatcgtgc tactggtaat ttttggctat
     5281 gccgtgattg agctgccagc actattagca gcataattcc catcaaaaat gaccgcttgc
     5341 aagcggttat ttttctagga tcttctgcaa agattcatta gaatagaaac aacgtcaata
     5401 ataaataaaa agaggagaaa caatgcaaac ttatcaacat aaagcccttt gtcgggtaag
     5461 aaccattacc ctttttctga gtttaaccaa agataaattg cagtgggaaa cggcattaaa
     5521 tgcggcaaaa gcagaatttg atctattagt tcccgctatt caaacacaag gctatcacat
     5581 acaatcgatt cgaatcgtta ccaacagttt cggggaatat cttgatctca ctaatattga
     5641 aacagcgaaa caggatttag cctatcttaa acagctatta acccaactta acgatagcgg
     5701 tttacgcatt cgctttgcca ttggtgaggc aaaaacaccc cacgaattag cattactacc
     5761 tgagctgatt ttaaattatg gtgatttatc taacgcttgt gtcaatattg aacccgatga
     5821 atttgggatt ttagacaatg aaaccatttt acaatctgct caaattatca aacaaatcgc
     5881 tgaaattacc ccaagaggtg aaggcaattt taattttacg gtgaatttta actgtaaacc
     5941 ttttattcct tattttccgg caagctacca ttcaagcaag ctccctaaca gttttgtgat
     6001 aggcctagaa acaccagatc tattagtagc ggtgttaaaa gagctgaaag ccagcccaca
     6061 taacgacttt tatcgccaat gctatgaaac gatgtctcaa gccttgcaat atcacgttga
     6121 tgaagttctc gaagcagtaa aatcggtaca acacaaatta caatttgcct ttgctggcat
     6181 tgatagttct gctgctccgt caaaaaactg tgcctcaatg acagaagttt atgaattaat
     6241 gggcgtacca ttttttgggg cagccggaac agtagaagcc tcttcacttc tgacaaaagt
     6301 ctttaaatct atcaaacatg taccgcttgt cggtttttca ggtttaatgt tggcagtaac
     6361 cgaagattta ggcttagccg caggcacaca caaagcccaa ttcgacattc gtgctttact
     6421 aacttatagt gctgtttgtg gcattgggtt agataccgta ccgatttcca atgaagccac
     6481 tgttgaacaa attgccgcat taatgcgaga caccggcaca atggcattta gactaaataa
     6541 accgcttaca gtacgtttat ttccaattcc gaataagagt gctggggaag tgacagaatt
     6601 tgaaagtgat gatttatgta actgccgaat tttagctgta ccttaaaata aaggctgatg
     6661 gatatttcca tcagcctttc aatttacttc accttcaatt ttttacctac cgtgatctga
     6721 taatttttca aattattcag ctcactgatt ttttgcggcg tagtaccgta agctctagca
     6781 atcgagtaaa ccgtttcatc ttgttggaca atatggtagc cactgttaga caccttaatt
     6841 tctctttgag agtctgattt tttagactga tttttttgat ctttctcaag agctgttttt
     6901 tcttttagtt gctgctcttt tttcttattg gttttagccg aatcttcttt tttatcctct
     6961 tttttgctct tttctttcaa ttttgtctta tctgattgcg tattcttctc ttgtttctca
     7021 gaagcaggct ttttagttaa atcagcttta gcagtttttt cctctttctt attttgctta
     7081 tcttctttgt ccgatttttt actgaccgaa gaactagcaa ctgcattttt tgcccgataa
     7141 gcgactaatc cattataaat ggcccgagca acttgtttac gataatttgc actggctagc
     7201 tttgcttcct cggttgaatt agataaaaat cccgtttcca ccaatacaga tggaatatca
     7261 ggtgaacgca gaacacttaa gcttgcgtgc tgaggagacg attttgctaa tgcagccaca
     7321 tttgacattt tagctaaaat gctcttgcct aattcatagc cggcacgttg agagtgagag
     7381 aactgtaaat caagcactgt ttgatttaaa taacgttcat tgttgcttga aagcaccgaa
     7441 ccagccccgc caagtaattc cgactgcttc tcgtggtctt ccaaccattt acccatttca
     7501 tcgctagcac ggctattaga aagtacccaa accgaagccc ctttcaagga atcgccacga
     7561 ggcgaagagt ctgcgtgaat agaaaccagc agatcggcac gatgcttacg ggcaatctcg
     7621 gtacgttgcg gtaattggat aaaataatct cccgagcgtg tcatcactgc tttaaaatta
     7681 ggatcggcat ctaacaaggc ttttagctct ttagaaattg cgagggtaac gcttttttcc
     7741 aaaatcccca gatttttacc aatagccccc ggatcttttc ccccgtgtcc ggcatcaatc
     7801 gccacaatgg ttttggcaaa tgtggaaaaa ctgaataaac tcaatgtgct aaaaacaata
     7861 aatctgataa cttgcttcat taccttccct acaagcggtc tatttttgat gaaaatttac
     7921 taatatatct actgcagttt gattttgcgg caacaggcta atctgccgtc cgtcattctt
     7981 ataatcaatt tggatcacaa aatcagcctc tggaatcatt cctttacctt taactgccca
     8041 ttcaagcaaa caaagcgttt gtggtttgaa ataatcacga attcccataa actccagctc
     8101 ttcaggatcg gctaagcgat acaaatcaaa atggtaaagg ctgaaaggcg gaagttggta
     8161 ttcttccacc agagtataag ttgggctttt tacattgcct tgatgcccga aagcccgtac
     8221 gatcgagcgg gttaaggtgg ttttacctgc cccaagttcg ccgtttaggt aaacaaccag
     8281 cgaatgagct tggtcttgca ataaatattt cttaagttct aacgcgaatg attgaccaaa
     8341 ttccagcaat ttagtttcat cttcgcagta aaaagagaga gaatctgtca ttatttttgg
     8401 tctagctgaa taaaatgttc ccgataaaat ttcaattcgt taatggattc acgaatatcg
     8461 tccaacgcta aatgcgtatt gcctttactg aatttatcta aaatctccgg tttccaacgg
     8521 cgtgccagct cttttaaagt actcacatct aagtggcgat aatggaaata atcggctaaa
     8581 tcaggcatat atttatacaa aaaacgttta tcttgagcaa tgctgttgcc gcaaatcgga
     8641 gaagcgcctt ttggcaccca gcgttttaag aagtctaaag tttgcaactc tgctgcccgt
     8701 tcagtcaatt tgctcgcttt cactcgttca atcagcccgt tagcggtatg ggttttgacg
     8761 caccaatcac tcattttctc taataaatca tcggtttggt gtaccgcaag taccggtcct
     8821 tccgctaaaa tatttaaatc cttatcggtc acaatggtgg cgatttcaat aatgcgttct
     8881 ttttccggat ctaaccctgt catttcaaga tcgatccaaa ttaaattttg ttcgttttga
     8941 gccattttat ttccttacac ttttgcaatt tttagggcat ttttgaccgc ttgcggcaca
     9001 aattggctga tgtcaccatt gtggcgatag atttccctta ccatcgttga agaaaggtaa
     9061 cgccattcta ttgaaggggg aaaaaaaata gtttctaaat cgcccgataa tttgtaattt
     9121 aactgagcga gttggatttc atagtcaata tcatctgccc cacgaatacc acggattaac
     9181 gctttggcat tctgctgttt ggcaaagtct gctaacaatc cactaaagcc aatcacctca
     9241 atattttgcc actgggtaca gctttgttta acaagctcca ctcgttcttc aagactaaaa
     9301 agcggctgct tgcttgggtt ttgagcaacg gcaacaatca cttttccaaa taagtgagag
     9361 gctttgcaaa ttatgtccaa atgcccattg gtaatgggat caaaggtgcc tgcataaatt
     9421 acgttataac tcattttatt tctctaaata ggaggctaat aaatccaaat ggcgttttaa
     9481 tgccccttga ttttcctgta acacgcttaa gccggatttt gcaatttctt gtccgatttg
     9541 gggctgctta agcaataatt gaatgctctc ggtcaaagcc tcgactgaac tttcaatttc
     9601 aatcacgcct ttcacctcac gcaatttctc aaagatttca gggaaattat aggtgtaaag
     9661 cccagaaacc accggaatat taaaagcgat tggttcaagt ggattatgcc caccgtgttt
     9721 gaccaaactg cctcctacaa aagcaatgtc agacaaccca tacagtaaca tcatttcccc
     9781 cattgtatca cctaacatta cttgagtatt ttggcttaac gttttattct cagtacgttt
     9841 tacataattt aaatctgatt tttgaatcag tagctcaact aaaccaaaac gctccggatg
     9901 gcgaggcact aaaatcaaca ctaaattcgg gtaatgctct aataagagtt tatgagcatc
     9961 taaaatcagc ttctcttccc cttcgtgagt actgccggca atccaaatcg gtctctctgt
    10021 taaattcaga ctagctttag ttttaatcac cgattgatga agctgtggcg taatttctaa
    10081 atcaaatttc aggttaccgg tattaaccat ttttgccggt gcataaccga gtgctaaata
    10141 gcgatctcgg cttacctcat cttgagccat aatcagacta atttggttga gcatatcctt
    10201 aatgctacct tttacccagc cataacgctt cgcagaacgt ggcgataagc gggcattggc
    10261 aatcacaaat ggaattttac gaatatttac tttacgaatt aaattcggcc aaagttcggt
    10321 ttcaattaca atcatcaatt tcggatcgat aaaattcaaa aaccgctcga tagcatcagg
    10381 taagtcataa ggcaaataaa aatgtgaaac actattacca aaagcagctt gcacacgccc
    10441 agagcctgtt ggcgttaccg ttgtgactat caacggaagt tcaggatatt gcttgctgac
    10501 tgccttaatc aaaagcgttg cagcaatcac ctcaccaacc gatgccgcat ggattaccac
    10561 cccttttgct ttcggttttt ccgattcgtc ataaatccca taacgctccc ataaacgttt
    10621 ccgataagcc ggttgtttac gccctttgta ccacattaat agcagaacca caggctgtaa
    10681 tagataactt aaacaaatat agagtaaacg tagcatttat tttccttata ccataaccct
    10741 cacctcttgt gggagagagt caaatacgcc aataaatcgt tcctctcttg ttcgagaggg
    10801 gggaacaagc ggttattttt accaaaaatt ttgcaatcta tatcctcaaa gacaaaacca
    10861 cggaataacc ttaatccgtg gtttatctcg catcattacg cttgatgtgg attgcgggta
    10921 ttcgtattca ctaagttacg cattaaaagt gcaaaatcca actcaatatc tgccggcaca
    10981 tctaaaaaga caaaatgccc gtcaccgagt gctgcgtcca cattttcatt tttgcggtta
    11041 agcatacgct cgattttaaa tacaatgttg cctttagggg tcatcatttc cactgaatcg
    11101 cccactaaga atttgttttt cactgccact tccgccaagc cttctgcatt gcgtttgccg
    11161 gtaaattcgc ccacaaattg ttggcgttct gaaatcgaat agccatattc atagttttgg
    11221 tattcatcgt gagtatgacg acgtaagaag ccctctgtat aaccacggtg tgcaaggctt
    11281 tcaagagtat ccattaaact ttcgtcaaac ggtttaccgg cagcggcatc atcaatcgcc
    11341 ttacgataca cctgagccgt tctcgcacag taatagaacg atttcgtacg cccctcaatt
    11401 ttcagtgaat gcacccccat ttgagttaaa cgctcaacgt gttgtactgc acgcagatct
    11461 ttagagttca taaaataggt gccgtgttca tcttcaaagg cggtcatttg ctcatcaggg
    11521 cgttgtgatt ctgtataaag gaacacttta tctgttgctt cgccattacc tagagtagga
    11581 gccacatttt tgacttcaat ttccggctca tacttaggca caatttgccc tacctcatca
    11641 atcttacctt cttccatttt atattcccaa cggcaagcat tggtgcaagt gccttggttt
    11701 gggtcacgct tattgatata gcctgaaagc aagcagcgac ctgaatatgc catacacaaa
    11761 gcaccgtgaa cgaagatctc aagctccata tccggcactt gttcacgaat ttcttcgatc
    11821 tcttcgagtg ataattcacg ggataaaatc acacgggtta gccccatttg acgccagaat
    11881 ttcaccgttg cccagtttac cgcattggct tgcaccgaaa gatgaatatc catttcaggg
    11941 aaattttcac gcaccaacat aattaagccc ggatcagaca taatcaaagc gtccggcttc
    12001 atatccacta ccacttttag atctttgatg aaggttttta attttgagtt gtgtggcgca
    12061 atgtttacca ccacatagaa tttttttcct aaggcgtggg cttcatcaat cgcaactttt
    12121 aaattggcgt ggttaaattc attattacgc acacgcaagc tataacgggg ctgtcctgca
    12181 taaatcgcat cggcaccata agcaaaagcg taacgcatat tttttaaaga acctgcaggc
    12241 gaaagtagct caggtttggc atattttaaa gtcatattat tctcttttct gataacaagt
    12301 caggacttct cgacgtgaga agcgtaagcg gtatattttc taagaaatat tgcgtgatgg
    12361 caagctaatc cattacaatc cgatttttat gtggggaaca atatgaaact taaatacctt
    12421 ttagcaacaa cattactggc tttttcaaca tttaccgccg ctcaaagcat caagacggag
    12481 atgatgcaaa tgaatatgca agcgaataaa ttgatgcgtg ccgaatcggc agaagagttt
    12541 agcgaaattg cgaatgattt cattataatt accgagaaaa ccaaagggat ttttcccaat
    12601 agcgtagaag gcgataaagc agctcaggaa gattaccaag ccggtatgca aaaattaatt
    12661 gatatggtta atcaagccag tgagaaagct caagcaggtg aattgcaaga agcaaaaatg
    12721 ctgatttccg agcttgaaat gatcaagcgt gaatatcaca aaaaatacaa ataattcaac
    12781 acattaaaag ggtgagctaa agctcaccct ttctattcaa attccagttc aaccgaattc
    12841 tcaccaagaa gtgcctttaa ttcgctaaac attgcctcat tcgggctgat tcgccactct
    12901 actccgcctt tgagcaatac cctaccttcc gggctttggt aataaaaatg cagcggtaaa
    12961 gtgccttctt tatgtggggt gatgatagcg gtcatttttt taataaaatc tgcagaaagt
    13021 tgctctttgc taatcgctaa cgctaaactt ttggcaaatc gaccccttgc ttcatcaagg
    13081 gataacactt ctcgagccga cattttcagt ccaccgctga aatcatcaaa ctgtaccgaa
    13141 cctgttgcca caataatttg gtcttgttgc atcaaatgcc cgaaattttc taaggcttcc
    13201 gagaaaaggg taatgtccaa tttccccgag cgatcttcaa tagtcgcaat cccaatacgg
    13261 cttcctcgct tggtaactgc cactcgagat gccataacaa ttcctgaaac cgtggtcatt
    13321 tgccctcgga aagtcggttg caattcattc agccgattag gggcatagtg ggataattct
    13381 ttgaggaatc taccaatcgg gtgtccgctt aaatacagcc cgagcgtggc acgctctcca
    13441 tctaaaatca cttgctccga ccattttggc gtattggcgt aagcattttg cacttcttcc
    13501 ggtgtctcgg taagcacgcc aaacatatcg ctctgcccga gttcctccat tttagcgtgc
    13561 tgatctgagg ctttaagtgc atcttccaaa ttcttcatca aggcagctcg gtgagggcct
    13621 aatttgtcaa aagcaccgga cataatcagg ctttcaaagg tgcggcggtt gatttttttc
    13681 agatcgaccc gagcggttaa atcaaataga tctttaaatt tcccctcttt ttggcgagct
    13741 gccagaattg cctcaatcgg tccttcccca acgcctttaa ttgctcctag cccgtaaaca
    13801 atttcgcctt tttcatttac gctaaaacga tgtttaccgc tgtttacatc aggcggcaca
    13861 acggttaagc ccatattcat acactcatcg tagaacccga caattttatc ggtattatcc
    13921 atctctgagg tcattaccgc agccataaat tctgccggat aatgggcttt tagccaaagt
    13981 gtttggtaag aaaccaacgc ataagctgct gagtgagatt tattaaagcc gtagccggca
    14041 aacttttcta ccaagtcaaa aatttgaccg gcaagtttac cgtcaatccc tttggcttcc
    14101 gccccttttt caaacacttc acgctgtgca gccatttcct ccggtttctt cttacccatt
    14161 gcacggcgga gtaagtccgc tccaccgagt gtataaccgg caagctcttg tgcaatttgc
    14221 ataacctgtt cttggtaaac aatgacccca taagtcggct cgagaatagg ttttaagcat
    14281 tcgtgttggt attgcggatc aggataagaa acctcttctt tgccgtgttt acggtcaata
    14341 aagttctgca ccatacctga ttccagcggc cctgggcgga atagtgccac caatgcgata
    14401 atatcttcaa aacagtccgg cttcaggcga gaaattaagt ctttcattcc ccgtgattca
    14461 agctggaata ctgctgtagt tttagctgcc agcaacagag caaaggattt tttatcatca
    14521 agcggaatgg tttcaatccg aatcggctct ttgccttcac gagccaaacg ttcgttaatc
    14581 atctccaacg cccatttgat gatggtgagc gtacgcaagc ctaagaagtc aaacttcacc
    14641 aatcctgcat attccacgtc atttttatca aaatgggtaa ccgggtgtaa gccctcgcta
    14701 tcgcaataaa gcggcgaaaa atcggtaatc gcagttgggg cgatcaccac accaccagcg
    14761 tgtttacctg cattacgagt tacaccttcg agcttacgag ccatatcaat aaggtctttc
    14821 acctcttcat cggcttcata tagctcaggc aattttggct cagcggcaaa ggctttttca
    14881 agcgtcattc ctggatcggg cggaatgagt ttggagatgc gatccacaaa gctatagggg
    14941 tgtccaagca ctcgccctac atctcgaatg accgctttcg ccgccatagt accgaatgtg
    15001 ataatttgcg ataccgcttg tcgcccgtag gtttccgcaa cgtgttcaat cacacggtct
    15061 cgcccgtcca tacagaaatc aacgtcaaaa tcgggcattg aaacacgctc agggttgaga
    15121 aaacgctcaa aaagcaaatc aaattccaat gggtcaagat cggtaatctt caacgcataa
    15181 gccaccaatg agcctgcccc tgagccacga cccggtccta ccggaatatc attatctttg
    15241 gaccattgga taaactccat cacgatcaaa aagtaacccg ggaaccccat ttggttgatc
    15301 acatctaatt caacttgcaa tctttcgtca taaaccgacc gcttgttcgc cctttcctca
    15361 ggatcaggga atagaaactc taaacgctct tctaagcctt ctttcgattt ttttaccaag
    15421 aaatcttcgg tggaaagctc accggtcggg aaatttggca ggaaatactc gcccaaacgc
    15481 acggtaaccg aacagcgttt cgcaatttca accgtgtttg ccaatgcact cggtaaatcg
    15541 gcaaacagct tgcacatttc ctcttcagta cggaaatatt gtttcggtga gtattttttc
    15601 gggcgtttcg ggtcgtctag ggtgtagctg tcgtgaatgg caacccgaat ttcgtgtgcg
    15661 tcaaagtcat cttctttcaa gaagacaaca tcatttaccg ccactaacgg aattgcattt
    15721 ttttgtgaaa attcgaccgc ttgtttgata tagcgttctt cgtctgcccg tccggtacgg
    15781 caaacggaaa ggtaaaaatg attcgggtaa tattgctgat aaaaagctaa tttttcttca
    15841 gcttcttgtc ggttttcttt gagtaaggct ttacccacat cgcccattcg cccgccggaa
    15901 agaatgatga tgccctcatt cagctctgct aaccattcac gttccaccat cggaaattcc
    15961 acatagcctt gctgataggc tttggacaaa atttgggtaa tattatggta gcctttgttg
    16021 ttcttcgcca gtaatgtcag ctcaaaataa tcttcattgc cgctctcggt tctaacataa
    16081 acatctgccc cgataatcgg cttaatccct gctcccaatg cttcgccata gaatttcacc
    16141 aacccgcaaa agtttataaa atccgttaag cccattgcca ccatattatt agcggcagcg
    16201 gttttaacta aggattttac cttagctaaa ccattaatca ttgagaaatc actgtgaact
    16261 tttaaatgaa cgaaacgaca atctgacata ggaatataat ctaagtaaag aagtttcccc
    16321 tctttagtaa agactgtcag gttctaaaaa gtgaagcctt ctgtgaataa tcccgttggg
    16381 cgaatgttat tcgcccctac aaacgagcat tattcttgct cagagttaca tttaaaatcc
    16441 gaatgtaggg gcgaattaca ttcgcccttt cagaacctaa caaccctgct ttatctaaag
    16501 aagggagtta aaattaatca cgttttttgc ttaacagcca ccaaacgatg atcaaacaga
    16561 gtaggcttgg aattaatgct ccaaccggta taggtaacca agtggcaatt aagcttaaat
    16621 tgccaaacac aatatttgcc acatagaaca taaagccggc aacaatacca atcacaattt
    16681 tcgcccccat cgtactacta cgaagcggcc cgaaaataaa ggagatcgca agtagcatca
    16741 tcaccgccat tgagattggt tggaatactt ttcgccagaa ggtgatctca aaacgtttcg
    16801 gatcttgtcc ggtatctttt aagaagccga cataatctgc caagcctgaa atcgagagcg
    16861 actccggttt gagtgaaaca atgcctaatt tgctaggggt taaactggtt tgccaaactt
    16921 gatctggctg tttagcttgc tggatctgat tttctcccac agtcgatttt tccactttag
    16981 atagcaccca gcctttttca tcactgtaat tcgcagttcg ggcttttaaa acagattgca
    17041 attcacgttt gttttgtcct tcgccgaatt gataaatcag tacgttatct aagctttttt
    17101 catttttaat atgattaata tagataaatg aattgccatc tttcgcccaa aacccgtctt
    17161 ttgtggcaag cattgagccg ccactttggg caatcgaacg catattacgg gcaaactgct
    17221 cggtttgtgg cacgccccat tcgccgataa tcatcgtaaa aatgactaac ggtaaggcag
    17281 ttttcatcac ggctaaacca atgcggaaac gggaaaaacc ggaggcttgc atcaccacca
    17341 attcactaag gctcgctagg ttgcctaaac cgagtaatga gccaagtaat gccgcaatcg
    17401 ggaaaaaggt ttcgatatct cgtggaatag ttaaaaaagt atagtatgcc gcttttaagc
    17461 catcgtaaga tccacgtcct acatcacgaa actcttccac aaatttaata atcgccccaa
    17521 gcccaatcaa cataaacagg gttaaaaaaa tcgcggataa aatcgttttg ccgatgtagc
    17581 gttctaaaat attcattgag aaaaattgca ttatgccacc gccttattgg ttaatttttt
    17641 tgcaccaaat tgatagcgta acttagacat aaatttacta tcccacgcat ttaaaataac
    17701 acctaaaact aaaaaggcaa ctgataccaa cggcattaac acttccgcat tcaacttgcc
    17761 tgatgcccct gacgatttta gcgagctttg tagtaagaaa tagattaaat aaagcaataa
    17821 cgccggcagt agtttagcaa aacgcccttg acgagggttt acactactca ttggcaccgc
    17881 taataatgcc attaacggta cagctaaaat caaagcaagc cgccaatgaa gctcggcttt
    17941 tgcttccggc gttttggttt ccattaattt cttgaaatcg gctcgttgca ctaatttctc
    18001 atcagattca acgtcttgat agcctaaata agcagaataa ttctcaaaat gtgaaatacg
    18061 gaaatcggca ctttgtggtg taccttcaaa acgcttgctc tctgccaagg ttaagacttg
    18121 atccccattt ggcaaacctt gcaacgtgcc ggattcagca acaaccactg aaggtttgtt
    18181 tttcttctgc tgttccggct ggaaaacgta gatatcattt agactgttat tttcaatttt
    18241 atcaataaat aacacatagc caccggcaga cataaattgt ccggccgaaa gagccgcaaa
    18301 acgtgggttg gctttcgctt ccgctaacat ttcactctgt ttattaattg cccaaggcgt
    18361 aagccaaaac acgttataaa ccgctaatgc agtggtaaaa atcgagagaa acatcgccac
    18421 tttaaccaat agcccttgcc cgataccaca agcccgcatt acggtaattt cactttcggc
    18481 ataaaaccgc ccgagggtta ataacaaggc gataaacagt gagagtggca gcattaattg
    18541 tgccattgtc ggcataccta agcctaataa gctcaccact aaatctgccg gtactttacc
    18601 actcacagca gaacttagaa cacgcactaa ttgctgacaa aaaaagatca gtaataagat
    18661 aaacaatatc gccaattggc ttttaaatat ctctttggtt aaatatcggc ttaagatcac
    18721 gttttttctc tataacattt acaaatctga ataccgctaa acacaagcgg tctatttttg
    18781 ttaatttttt gcaaagagcg caaaataact tattcgaatc gctaataata cctttttcat
    18841 acaaaaaaat cacctataga aaatatcacg cacggcaaaa ccgtgcgtaa gtattattgt
    18901 tttttcgatt ttttcgatga tgttgcttta tgagcttcaa gaattaattt cttaccttgg
    18961 ctatcttcaa tttcaatctt aggtggtgct tccgtatttt gatgaaggat agctataata
    19021 ttttcacctt gtgcaatatc ttcaaagttt cctttcacac gtaacttagc cgcatcaaca
    19081 ctagtgtcaa atactaagaa tgtacctaat gcggtaactc taatattttt aagccctata
    19141 ttgtccttcg ttaccgtttt atattgaggt gcttttttcc cttttgcagc cataatcttc
    19201 tcttgattag tcgcaatatt aagaatattt tgaactttag tcgcttctgc tgtagattgt
    19261 gcctgttctg ttaaatttgg ttctccatca aaaataacat ccccaacaaa ttgcacctct
    19321 ttaggctcat tttgcaataa tggtgcaacg tctttagctg aaacaaccaa aaataaccgt
    19381 tcacctattt tttcaaaacg gacatcaata ttggttaatt gtgattcaat ttgttcatta
    19441 attgtcttga tcgcagtttc tgtctcattt tgaagcgata ttttacgtgt aatatcaaca
    19501 tcataagcaa taaaaccaac ttttaaacgt tgtgataact gctgaagtaa attgcccaca
    19561 tttccatcat aagaaagacg taactttgcc tgctcatagc gactaatttg agcatcatca
    19621 ttagcgaaaa tagtgttttg agtccctaag ccgattagac caacaacaaa cgttttaccc
    19681 caaaagcgca tcatttttat ctccaattat tctcttaaat ctaaaaaact cttttagtat
    19741 aaagtaagca aac
//
LOCUS       DANLXD010000046        19368 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.046, whole genome shotgun sequence.
ACCESSION   DANLXD010000046 DANLXD010000000
VERSION     DANLXD010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19368)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19368)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19368
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.046"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            30..980
                     /gene="tal"
                     /locus_tag="PXD18_001325"
     CDS             30..980
                     /gene="tal"
                     /locus_tag="PXD18_001325"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDL6301762.1"
                     /translation="MSQLDTLSKMTVIVADTGDIEAIKLYKPKDATTNPSLILSASAL
                     PQYAPLIEEAINYAKAQSSDKDQQLVDAEDKLAVNIGLEILKLVPGRISTEVDARFSY
                     DTEKTIAKARKLIGLYNDAGISNDRILIKIASTWQGIKAAEQLEKEGINCNLTLLFSQ
                     AQARACAEAGVYLISPFVGRILDWYKAHEGKEYAPAEDPGVISVTNIYNYYKQHGYDT
                     IVMGASFRNVGEIIELAGCDRLTISPPLLKELQESDEKLVCKLDYKGEIKPRPEKMTE
                     AEFYWEHNQEPMAVEKLAEGIRKFAIDQEKLEAMLAEKLQ"
     gene            complement(1042..1315)
                     /locus_tag="PXD18_001326"
                     /pseudo
     CDS             complement(1042..1315)
                     /locus_tag="PXD18_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599987.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
     gene            complement(1346..1810)
                     /locus_tag="PXD18_001327"
     CDS             complement(1346..1810)
                     /locus_tag="PXD18_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HDL6301763.1"
                     /translation="MKKLALAVALMSSFALVGCANTDVFSGSVYSGEQAKEARSIAYG
                     TIVSVRDVKIQARSEGVIGTVGGGVLGGVAGNAIGGGTGQAIATAVGAVAGAVIGNQV
                     EQKASQVSSLEMVIRKDDGKEIVVVQKKEDGFVPGKRVRIVGSNSDLNVSLL"
     gene            complement(1831..2430)
                     /locus_tag="PXD18_001328"
     CDS             complement(1831..2430)
                     /locus_tag="PXD18_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDL6301764.1"
                     /translation="MDKIIAENAKFFEKMTACFGDLSQFEQKIRQIAEIAGIDLAAYE
                     IDHLAVRMNQTETAEQWKILLLDGATLLKESEVNGRPIGLFALIQAVEFCGQFVKIVE
                     LPFPKNKVYLEEGWEHIELVFPMLDNESSEQWVSRALSHFRLADNSEIKLKISQPQVE
                     GERLPNPSIAISLRNVTFCNPYCLKLHPYDIKSVIMSEN"
     gene            2464..4191
                     /gene="argS"
                     /locus_tag="PXD18_001329"
     CDS             2464..4191
                     /gene="argS"
                     /locus_tag="PXD18_001329"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDL6301765.1"
                     /translation="MNIQQILSDKIKQAMVASGADSNVEPLVRQSGKPEFGDYQANGA
                     MGAAKKLGMNPREFAQKILENADLNGIADKLEIAGPGFINIFLNPEWLAENTNSSLQA
                     VNFGIKTANPQTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLAFLGNNVIRANHVG
                     DWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRAAKEHYDSDEAFAEKARNYVVKLQ
                     SGDKYCLTMWKKLVDITMHHNQENYNRLNVTLTEKDVMGESLYNPMLPEIVADLKAKG
                     LAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRAL
                     VFSDSRQAQHMQQAWLITRKAGYVPDSFSLEHPFFGMMLGKDGKPFKTRSGGTVKLKD
                     LLDEAVERADKLIAERSTELTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML
                     TFEGNTAPYMQYAYTRIRSIFARANIDENALSGSIQLNEPKERALAVKLLQFEEALNG
                     VAKEGMPHILCQYLYELAGSFSSFYEACPILNAEETTKNSRLKLAALTAKTLKQGLDL
                     LGIKTVEKM"
     gene            4381..5547
                     /gene="cgtA"
                     /locus_tag="PXD18_001330"
     CDS             4381..5547
                     /gene="cgtA"
                     /locus_tag="PXD18_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Obg family GTPase CgtA"
                     /protein_id="HDL6301766.1"
                     /translation="MKFIDEALIRVEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGD
                     VYLIADENLNTLIDYRFEKRYAAGRGENGRSAGCTGHRGQDITLRVPVGTRAIDNDTQ
                     EIIGDLTRHGMKMLVAKGGYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLKLELLLLA
                     DVGMLGLPNAGKSTFIRSVSAAKPKVADYPFTTLVPSLGVARVGADRSFVVADIPGLI
                     EGAADGAGLGIRFLKHLERCRILIHLVDIMPIDESDPAHNISVIESELYQYSEKLAEK
                     PIWLVFNKIDTIGEEEAAERAKDIAEQIGWEGDYYLISAATGQNVQALTRDIMDFIEA
                     NPREVEEENKAPEEVKFKWEDYHNEAMQNAVEEDWDDDWSEEDDEGIEFIYERH"
     gene            5632..6249
                     /locus_tag="PXD18_001331"
     CDS             5632..6249
                     /locus_tag="PXD18_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate 1-dehydrogenase family
                     protein"
                     /protein_id="HDL6301767.1"
                     /translation="MLSSTSCDLFNIPFFQFAQMKKYCPEEIPRIKAEYKTQWEIWKK
                     LHQEVSRQLGQPFAPPHIEKWCNGWQVRAHFFAYYKYEFNRNSAAILSVILNRRRLQV
                     SLDWHCYRADRSQINVHQYNQWWENLDREKFADFEIWHGSESEYDDFRTVSQMSEQAF
                     TLTNEEDFWCIGKNVEKDDLDNIDVVEFIYQTIRALLPLYEKCHQ"
     gene            complement(6296..8254)
                     /locus_tag="PXD18_001332"
     CDS             complement(6296..8254)
                     /locus_tag="PXD18_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HDL6301768.1"
                     /translation="MIAELGNYTLALALAISILLAVLPLWGAEKQNSTLIALARPMTW
                     AMFLALTVSFGSLFYLFAVNDFTVQYVVNNSNSRLPLQYRLSAVWGAHEGSLLLWVWL
                     LSLWSVGVATFTRKMPEDAVARVLGLMGVIGIGFLMFVIFTSNPFDRTFPNFPIDGKE
                     LNPMLQDVGLIFHPPLLYMGYVGFSVAFAFAIASLMTGRLDTAWARWSRPWTMAAWVF
                     LTLGIVLGSWWAYYELGWGGWWFWDPVENASLMPWLAGTALIHSLAVTEKRGTFKAWT
                     VLLAILAFSLCLVGTFLVRSGILVSVHAFASDPTRGLYILAYLVLVVGGSLLLYAFKG
                     SEIKSLDNYERYSRETMLLINNILLMAFLSVVFLGTLLPLIHKQIGLGTISIGAPFFD
                     QMFLILMVPFSFVLGIGPLVKWRRDQVSAIRKPVIIATILMALLGFGLPYLFRNTITV
                     SVVLGTMMSVFIVLLSLYELHQRATHRHSFLSGIFKLSRSHWGMVLAHLGVAMTVFGI
                     AFSQNFSIERDVRMNVGDKAEILDYQFEFKGIKITDGANYQGGTAELEITRNGKYEAT
                     LNAEKRFYTVSRMGMTEAAIDWGFTRDLYAALGEKLEDNSWAVRLYYKPFIRWIWIGG
                     LFMALGGLLCMLDKRYRLRIENKKEVIA"
     gene            complement(8251..8808)
                     /gene="ccmE"
                     /locus_tag="PXD18_001333"
     CDS             complement(8251..8808)
                     /gene="ccmE"
                     /locus_tag="PXD18_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HDL6301769.1"
                     /translation="MNPRRKSRLKVVVSILLGLSVAAGLTLYALSQNIDLFYTPSEIV
                     NGKNDDPKQKPEVGQRIRVGGMVVEDTVKRDDKSLKVVFDLNDIGPSITVEYEGILPD
                     LFREGQGIVAQGVLIEPTRLKATEVLAKHDENYMPPELGDKLKEQHKKSGVSEQDLKG
                     ESETDRKMKAEAEAEKANNVQGESK"
     gene            complement(8994..9191)
                     /gene="ccmD"
                     /locus_tag="PXD18_001334"
     CDS             complement(8994..9191)
                     /gene="ccmD"
                     /locus_tag="PXD18_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HDL6301770.1"
                     /translation="MTFQFESISDFFAMGGYGFYVWLSYGVSFIAMIGLIWLSRREQK
                     AILAQAKKEIVREEKLKQTSQ"
     gene            complement(9206..9943)
                     /locus_tag="PXD18_001335"
     CDS             complement(9206..9943)
                     /locus_tag="PXD18_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease"
                     /protein_id="HDL6301771.1"
                     /translation="MWKWLHPYAKSETQYHLLGKIQPFLGWLSLIMLAAAFVWGLAFA
                     PKDYQQGDSYRIIFIHVPAAIWSMGVYGSMAVAGLVALVWQIRQANLAMISMAPIGLV
                     FAFISLATGAIWGKPMWGTWWVWDARLTSALVLFFLYIGVMALYSAFQDRQTGAKAAA
                     VLSVVGVINLPIIHFSVEWWNTLHQGATITKFDKPSMAVEMLIPLLLAIFGSLIFTAW
                     FSIWRYRIALLKDERNRPWVKQLAKSV"
     gene            complement(10143..10805)
                     /gene="ccmB"
                     /locus_tag="PXD18_001336"
     CDS             complement(10143..10805)
                     /gene="ccmB"
                     /locus_tag="PXD18_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005565617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HDL6301772.1"
                     /translation="MILLTIIQRELTIAFRKPSEILNPLWFFLMVITVFPILMGPNPE
                     LLGKIAGGIAWVAALLSALLSFERLFRDDYLDGSLEQLMLLPLALPQVALAKVIAHWL
                     LTGLPLILLSPIAAILLSLETHVWWALVLTLLLGTPILSCLGAIGVALTVGLRKGGTL
                     LSLLILPLFLPVLIFAAAVLEAATLNMGYSGQLAIIGAILAVTLTFSPFAIAGALRIS
                     LN"
     gene            complement(10802..11443)
                     /gene="ccmA"
                     /locus_tag="PXD18_001337"
     CDS             complement(10802..11443)
                     /gene="ccmA"
                     /locus_tag="PXD18_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis heme-transporting ATPase
                     CcmA"
                     /protein_id="HDL6301773.1"
                     /translation="MNQTAQYQLKLNQIACERGETRLFEGCSFTVQSGEWVQIEGHNG
                     IGKTSLLRILAGLFLPAEGEVLWNDIAIQKQRDHYYSELFYLGHYSGVKPELTPWENL
                     RFYQKIQQLPQDDDALWHALTKVSLIGREDLPCSHLSAGQQRRVALAKLWLTNAKLWI
                     LDEPFTAIDKKGVADLIAHIEQHCEQGRLVIFTSHQAAESDKVRIISLDQFKV"
     gene            complement(11587..12297)
                     /gene="hda"
                     /locus_tag="PXD18_001338"
     CDS             complement(11587..12297)
                     /gene="hda"
                     /locus_tag="PXD18_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HDL6301774.1"
                     /translation="MQLPLPIHQIDEDTFDNFYSQNSEVLLGSLKRNFTDVQQPFFYI
                     WGGKSCGKSHLLKAVSNHFLLNNQTSSYIPLTKANYFSPLVLDNAELLNVICLDDIQA
                     IAGDAEWELAIFNLFNQIREQQGLFNEGQKTLLLISADCPPHQLNIQLPDLRSRLTWG
                     EVYQLNDLTDEQKCQILQLNAHQKGVELSDEVAHFLLKKAGTDLEQLSKILDKLDKAS
                     LQAQRKLTIPFVKEILSL"
     gene            12567..14168
                     /locus_tag="PXD18_001339"
     CDS             12567..14168
                     /locus_tag="PXD18_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6301775.1"
                     /translation="MKNMTKLSLITLALAASSSVFAAPKTFVYCLEASPSALSPVLST
                     DGASFDVNALPIYNKLTDFEDGTTNVIPSLAEKWDISEDGKTYTFHLRKGVKFHDNKE
                     FKPSRELNADDVVFSINRQFDPNHPFHKVSGGNYEYFIGMDMQNIIDKVEKVDDHTVK
                     ISLKVPNAPFLANLAMDFNAVYSAEYAEQSLKAGKPERIDTNPIGSGPFQFVDYQKDA
                     TVRYKAFENYWQGTAKIDRLVFAITPDASVRLAKLQKGECHAMPYPNPADIEDLKKDP
                     NIELMSQSGMNIGYLALNSSIKPLDNQKVRQALNHAVNKQAIVDAVYQGAGQVAKNPI
                     PPTMWSYNEAVQDYDYNPEKAKALLKEAGFENGFDTELWAMPVSRPYNPNARRMAELI
                     QEDWKKVGVNAKIVSYEWGEYLKRLRQGEAATSMIGWTGDNGDPDNFLNTLLSCSAVE
                     AGSNYAKFCHKPFEEVVLGAAQESDKAKRTELYKQAQVIFKEQAPWITIAHSTVYFPV
                     RKEVKGYVMSPFSLHNFYKVDLADK"
     gene            14440..15444
                     /locus_tag="PXD18_001340"
     CDS             14440..15444
                     /locus_tag="PXD18_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL6301776.1"
                     /translation="MFSFILKRVLMVIPTFIAITLITFALVHFIPGDPIEIRMGERGL
                     SPEVHQQMMEQLGLNRPLFEQYISYIKGVLHGDLGNSFRNNEPVLKEFFTLFPATVEL
                     AFFALLWSLIFGIILGVIAAVKKESWISHTVTTLSLTGYSMPIFWWGLILILYFSTPL
                     GLPASGRLPSEYWIEAETGFMLIDTWNSDEPGAFLAAIKSLILPSIVLGTIPLAVVTR
                     MTRSSMLEVLGEDYIRTAKAKGLNTTRIVIVHALRNALIPVVTVVGLIVGQLLSGAVL
                     TENIFSWPGIGKWIIDAINSRDYPVLQGSVLIIATIIILVNLTVDLLYGIVNPRIRHS
                     "
     gene            15546..16439
                     /locus_tag="PXD18_001341"
     CDS             15546..16439
                     /locus_tag="PXD18_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL6301777.1"
                     /translation="MSGITAVNPPAPKTPLQEFWYYFCQNRGALIGLTFIAIVFVACV
                     FAPWVAPFDPIEQNRSALLLPPAWLEGGNSAHLLGTDDIGRDILSRIIYGSRLSVFIG
                     LVIVLLSCVFGVILGLLAGYYGGTLDIIIMRFVDIMLAIPSLLLTIGVVTILGPSLIN
                     AAIAIAIVSIPSYVRLTRASVLSEKNRDYVTASRVAGASVLRLMFVVILPNCLAPLIV
                     QMTMGISNAILELAALGFLGIGAQPPTPELGTMLAESRGFMQSANWLVTIPGLAILSL
                     VLAFNLMGDGLRDALDPKLKQ"
     gene            16450..17439
                     /gene="dppD"
                     /locus_tag="PXD18_001342"
     CDS             16450..17439
                     /gene="dppD"
                     /locus_tag="PXD18_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HDL6301778.1"
                     /translation="MALLTVDQLSVHFGETKTPFKAVDRISYEVNEGEVLGIVGESGS
                     GKSVSSLAIMGLIDFPGRVMAEKLYFNGNDLLALKPKEKQQIVGADVSMIFQDAMTSL
                     NPSYTVGYQIMEALKVHQGGSKASRRERAIELLTMVGIPDPESRLEVYPHQLSGGMSQ
                     RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIDLLLELQRKENMALILITHDLALVA
                     ESAHRIIVMYAGQVVEEGKAEQIFKAPLHPYTQALLKALPEFAEGKSRLQSLPGVVPG
                     KYDRPQGCLLNPRCPYATEKCRTIEPAMQIINGRQVKCHTPLNAQGEPIRIAV"
     gene            17567..18556
                     /locus_tag="PXD18_001343"
     CDS             17567..18556
                     /locus_tag="PXD18_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6301779.1"
                     /translation="MKENNSLPPFLKAVDLKKYYPVKKGMFAKPKTVKALDGVSFTLE
                     RGKTLAIVGESGCGKSTLGRMLTMIESPTEGELFYNGQNFLVNDKETAQLRRKKIQIV
                     FQNPYSSLNPRKKVGSILEEPLLINTNLSAKERKEKVLEMMAKVGLKPEFYDRYPHMF
                     SGGQRQRIAIARGLMLQPDIVVADEPVSALDVSVRAQVLNLMMDLQEEMGLSYVFISH
                     DLSVVEHIADEVMVMYLGRCVEQGDTKTIFSNPRHPYTQALLSATPRLNPEQRRERIK
                     LTGELPSPLNPPKGCAFNARCRFATDRCYVERPELKTYQDGTRIACFVVEENN"
     gene            complement(18790..19362)
                     /locus_tag="PXD18_001344"
     CDS             complement(18790..19362)
                     /locus_tag="PXD18_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDL6301780.1"
                     /translation="MIHNKISLDISSEQLADIRQQMLKFAQLQLQDIALAEDMVQEAF
                     VNAIKNIDNFQRKAALKTWIFAILKNKIIDYLRKKDRIVLESDLADDDEENHFFDNYG
                     HWKEEYYPSSWQEEAVYSKEFWILFEVCLSNLPAKQARVFMMREYLEATSDEICRVVN
                     ITSDNLYTLIYRARLQLQQCLSRKLTERNR"
BASE COUNT         5846 a         4237 c         4010 g         5275 t
ORIGIN      
        1 tatttcacaa tcaaaaaagg aatcagacta tgagccaact tgacacctta agcaaaatga
       61 ccgttatcgt tgctgacact ggtgatattg aagcaatcaa actttataag ccaaaagatg
      121 caacaacaaa cccgtcttta attttaagtg catcggcatt accgcaatat gctccattaa
      181 ttgaagaagc gattaattac gcaaaagcac aaagtagcga taaagatcaa cagttagttg
      241 atgctgaaga taaattagcg gtaaatattg gtttagaaat cttaaaactt gtacctggac
      301 gtatttctac agaagttgat gctcgttttt cttatgatac tgaaaaaact atcgctaaag
      361 cacgtaaatt aattggatta tataacgatg caggcatcag taatgatcgc attttaatta
      421 aaattgcctc tacttggcaa ggtataaagg cagcagaaca gttagaaaaa gaaggcatta
      481 actgtaactt aacgttatta ttctctcaag ctcaagctcg tgcgtgtgca gaagcagggg
      541 tttacttaat ctctccattc gttggtcgta ttttagactg gtacaaagct cacgaaggta
      601 aagaatatgc tccagctgaa gatccaggtg taatttcagt aaccaatata tacaattact
      661 acaaacaaca cggttatgac actattgtaa tgggtgcaag tttccgtaat gtaggagaga
      721 tcattgagtt agctggttgc gaccgtttaa ccatctcacc accgttatta aaagagctac
      781 aagagagcga tgaaaaatta gtttgcaagc tagattacaa aggtgaaatc aagcctcgtc
      841 cagaaaaaat gacagaagca gaattctact gggagcataa ccaagagcca atggcagtag
      901 aaaaattagc tgaaggcatt cgtaaatttg cgattgacca agagaagtta gaagcaatgc
      961 ttgctgaaaa acttcaatag acaacgcata aaaaaaccgg cattaacgat aattaatgcc
     1021 ggttttaatt tctataaatg attatttaaa ctcataacgt ctaatcgttt ttagatcgct
     1081 atcttcattt ttaatttcat cggcaagatg aacacgagca ccaaccgctg catgtgcatc
     1141 atactcacga gttagagtca cagtttcacc attatctcgt tgaactgtaa gttcaacaac
     1201 atcgtttgat actgctttgc tagataaatg ttgcattacc tttatcagaa taaacatctg
     1261 cagtacaagc tgctaacata agtgaagcta atacagctaa agaaagtttt ttcattaata
     1321 atatatcctc taggaaaaac taaaattaaa gcagagaaac attcaggtct gaattagacc
     1381 ctacgattct cacacgtttg ccaggcacaa aaccgtcttc tttcttttga acgaccacga
     1441 tttctttacc atcatctttg cgaataacca tttccaatga agaaacttga ctcgcttttt
     1501 gttctacttg attaccaatt accgcaccgg caactgcccc cactgcggtt gcaatcgctt
     1561 gccctgtacc accgccaatc gcattaccgg caacgccacc taatacacca ccgccgacag
     1621 taccgatcac accttcactg cgtgcttgaa ttttcacatc acgcactgaa acaatagtgc
     1681 cataagcgat agaacgagct tcttttgcct gctcaccgga ataaacgctt ccgctaaaca
     1741 cgtctgtatt tgcacagcca actaaagcaa aacttgacat taatgcgaca gctaaagcta
     1801 attttttcat tttgtttgtt ctccgaaacg ttaattttct gacataatta cactttttat
     1861 atcataaggg tggagcttta gacaataagg attacaaaaa gttacatttc tcaagctgat
     1921 cgcaatgctt ggatttggca atctctcccc ttctacctga ggttggctga tttttaattt
     1981 aatctcagaa ttatcagcaa gtctaaagtg cgacaatgcc cttgacaccc attgttccga
     2041 actttcgttg tctaacatcg gaaaaaccag ctcaatatgt tcccagcctt cttctaaata
     2101 aaccttattt ttcggaaaag gcaactcgac aatctttaca aattgtccgc aaaattcaac
     2161 cgcttgtatt aatgcaaaca gccctatcgg tctgccgttt acctcgctct ctttaagtaa
     2221 ggttgcccca tcaagcaaaa ggatcttcca ctgttctgcg gtttcggttt ggttcattct
     2281 taccgcaaga tgatcgattt catacgctgc taaatcaatg ccggcgattt cagcaatttg
     2341 tcggattttc tgttcaaatt gcgataaatc gccaaaacaa gcggtcattt tctcgaaaaa
     2401 ttttgcattt tctgctataa ttttgtccat ttttttgtaa atagaattta aataggttaa
     2461 acagtgaata ttcaacaaat tttatcagat aaaattaaac aggcaatggt agcaagcggt
     2521 gcagacagca atgtcgagcc tttagtccgc caatcgggca agccggaatt tggcgattac
     2581 caagccaatg gtgcgatggg tgcagcgaaa aaattgggga tgaatccgcg tgaatttgcc
     2641 caaaaaatct tagagaatgc cgatttgaac ggtattgccg ataaattaga aattgccggt
     2701 ccgggcttta tcaacatttt cttaaaccca gaatggctgg cggagaacac taacagttca
     2761 ttgcaagcgg tcaattttgg cataaaaact gcaaatccgc agacgattgt gatcgactac
     2821 tcctcgccaa acgtagcaaa agaaatgcac gtcgggcatt tgcgttccac cattattggc
     2881 gatgcggtag ttcgtaccct tgcgttttta ggcaataatg tgattcgtgc caaccacgtt
     2941 ggcgactggg gtactcaatt cggtatgctg atcgcttacc ttgaaaaaat ggaaaatgag
     3001 cacgccagcg aaatggagct aagcgattta gaagccttct atcgtgcggc aaaagagcat
     3061 tatgattcag acgaagcatt cgccgaaaaa gcccgtaact atgtggtgaa attacaaagc
     3121 ggcgataaat attgcttaac aatgtggaaa aaattggtcg atattacaat gcaccacaat
     3181 caagagaact acaatcgctt aaatgttacg ctcaccgaaa aagatgtaat gggcgaaagc
     3241 ctctacaatc caatgttgcc tgaaattgtg gcggatttaa aagccaaagg cttagcggtg
     3301 gaagatgacg gtgctttagt ggttttcctc gatgaattta aaaataaaga tggcgaccca
     3361 atgggcgtaa tcgtgcagaa aaaagatggc ggtttcttat ataccactac cgatattgcg
     3421 gcagcaaaat atcgctacga gaccttaaaa gctgaccgag ccttagtctt ttctgacagc
     3481 cgccaagctc aacatatgca acaggcatgg ctcattaccc gcaaagcggg ctatgtgccg
     3541 gacagtttca gccttgaaca cccgttcttc ggaatgatgc taggcaaaga cggcaaaccg
     3601 ttcaaaaccc gtagcggtgg cacagtcaaa ctcaaagatt tattagatga agcggtagag
     3661 cgtgccgata aactgattgc cgaacgttca accgagctaa ctgcggaaga aaaagccgcc
     3721 gtggttgaag cggttgcgat tggttcggtg aaatattctg acttatcgaa aaaccgcacc
     3781 accgattatg tgttcgattg ggacaatatg ctgacctttg aaggcaatac cgccccgtat
     3841 atgcagtatg cctacacccg cattcgctcc atctttgccc gtgcgaacat tgacgaaaat
     3901 gcattgagcg gttcaatcca actcaatgag ccaaaagagc gtgcattagc agtgaaacta
     3961 ttgcaatttg aagaggcatt aaacggcgtg gcaaaagaag gtatgccaca tattttatgc
     4021 caatatttat acgagcttgc aggtagtttc tccagtttct acgaggcttg cccgattctc
     4081 aatgccgaag aaacaaccaa aaacagccgt ttgaaactcg ctgccttaac ggcgaaaacc
     4141 ttgaaacaag ggttggattt actcggtatt aaaactgtag agaagatgta atacaaactc
     4201 tctccccttg tgggagagag accgcttatg agcgttcagc gaaataagca gagagagggg
     4261 acaagcggta atttttatta aaatttttac acattttccc ctctccctga tttttcttct
     4321 gaacgaagaa aaatctgtcc ctctcccaca aggggagagg gcatataaaa ggaaacaaat
     4381 atgaaattta ttgacgaagc cctgattcgt gtagaagcag gcgatggcgg taatggctgt
     4441 gtgagcttcc gccgtgaaaa atttatcccg aaaggcggac ctgacggtgg tgatggtggc
     4501 gatggtggtg atgtgtattt aattgccgat gaaaacctaa acacccttat cgactaccgc
     4561 tttgaaaaac gttatgccgc tgggcgtggc gagaatggtc gcagtgccgg ctgtaccgga
     4621 catcgtgggc aagatattac cctacgagtg ccggttggaa cccgtgcgat tgataacgac
     4681 acccaagaaa ttattggcga tttaacccgc cacggaatga aaatgctggt ggcaaaaggt
     4741 ggttatcacg gtttaggtaa tacccgcttt aaatcctcag taaaccgagc tccacgccaa
     4801 aaaaccaacg gtacgcctgg cgaaaaacgt gatttgaaat tagagctgtt actgcttgcc
     4861 gatgtgggaa tgcttggctt accaaacgcc ggtaaatcca cctttatccg cagtgtctct
     4921 gctgccaaac caaaagtggc ggattacccg ttcacgacgc tggtgccaag tttaggggta
     4981 gcccgtgtgg gggccgaccg cagttttgtg gttgccgata ttccggggtt aattgaaggt
     5041 gcagcagatg gtgcagggct ggggattcgt ttcctaaaac acttggaacg ttgccgtatt
     5101 ttgattcact tagtcgatat tatgccgatt gatgaaagcg atccggctca taatatttcg
     5161 gtgattgaat ccgagcttta ccaatacagc gaaaaactcg ccgaaaaacc gatctggttg
     5221 gtgtttaata aaattgacac catcggcgaa gaagaagctg ctgagcgagc aaaagacatt
     5281 gccgagcaaa tcggctggga aggcgattac tacttgattt ctgccgctac cggtcaaaac
     5341 gtgcaagctc tcactcgtga tattatggac tttattgaag ccaacccacg cgaagtggag
     5401 gaagaaaata aagcacctga agaagtcaaa ttcaaatggg aagactacca caacgaagca
     5461 atgcaaaatg cggtagaaga agattgggac gacgattgga gcgaagaaga tgacgaaggc
     5521 atagagttta tttacgaacg ccattagtgc aataatacaa gcggttgttt ttaaacggag
     5581 atttgcaaat ttccggagaa aaacaaccgc ttgtaggttt aaggagagtt tatgcttagc
     5641 tcaacatcgt gcgatttatt caatattccg ttcttccaat ttgctcagat gaagaaatat
     5701 tgccctgagg agatccctcg aattaaggcg gaatataaaa ctcaatggga aatttggaaa
     5761 aagctacatc aggaagtttc tcgtcagctt gggcagccgt ttgctccacc acatattgag
     5821 aagtggtgca acggttggca agttcgagcc catttttttg cctattacaa gtatgaattt
     5881 aatcgaaatt ctgcggctat tctttccgtg attttaaatc gtcgccgttt gcaagtgagc
     5941 cttgattggc attgttatcg agccgatcgc tcgcaaatta acgtgcatca atacaatcaa
     6001 tggtgggaaa atttagatcg ggaaaagttt gctgattttg agatttggca cggaagtgag
     6061 agtgaatatg atgattttag aaccgttagt cagatgtcag agcaagcgtt caccctaact
     6121 aacgaggaag atttttggtg tatcggcaaa aatgtggaaa aggacgattt ggataacatt
     6181 gatgtagtag aatttatcta ccaaaccatt cgggcattat tgccacttta tgagaaatgt
     6241 catcaataaa cactaaaaag agaggcgaac atcatttgtt cgcccctttc aaaatttaag
     6301 ctatcacttc ttttttattt tcaatgcgta aacggtagcg tttatccaac atacagagta
     6361 aaccaccgag agccataaac agcccgccaa tccaaatcca gcgaatgaac ggtttataat
     6421 acaaacgcac tgcccaagag ttatcttcta atttttcgcc aagtgcagcg tataaatctc
     6481 gggtaaagcc ccagtcaatc gccgcttcgg tcattcccat tcggctcacc gtatagaaac
     6541 gtttttcagc attaagtgtg gcttcatatt taccgtttcg agtaatttca agctcggcag
     6601 tgccgccttg atagtttgcc ccatcggtga ttttaatacc tttaaattca aattggtaat
     6661 ctaaaatctc agctttatca cccacattca ttctgacatc tcgttcaatg ctgaaatttt
     6721 ggctaaatgc aatgccgaac actgtcatcg caacccctaa gtgagccagc accattcccc
     6781 aatgtgaacg ggacagtttg aaaatgccac ttaagaacga gtggcgatgg gttgcacgtt
     6841 ggtgtagctc atacaggcta agtaacacaa taaagacaga catcatcgtg cctaacacca
     6901 cactcacggt aatggtgtta cggaataagt atggcaatcc gaatccaagc aatgccatta
     6961 aaatagttgc aataattacc ggtttacgaa tagcagaaac ttggtctcta cgccatttca
     7021 ctaatggtcc aatccctaat acaaatgaga aaggaaccat taaaattaag aacatttggt
     7081 caaaaaatgg tgccccgatt gaaatcgtcc ctaagccgat ttgtttgtga attaatggca
     7141 gtaaggtccc taaaaacacc accgataaaa atgccattaa taaaatatta ttaatgagta
     7201 gcatcgtttc tcttgaatag cgttcatagt tatctaagct tttaatttcc gagcctttga
     7261 atgcatacag cagtaaagaa ccacctacta ctaacaccaa gtaagccaag atgtataaac
     7321 cacgagttgg atctgaagca aaggcgtgaa ctgacaccaa aatgcctgaa cgcactaaga
     7381 aagtccccac taaacagagc gagaaagcaa gaatcgctaa taagaccgtc cacgctttaa
     7441 atgtgcctcg tttttcagtc actgctaatg aatgaatcag tgctgttcct gcgagccacg
     7501 gcattaatga ggcattctcg acaggatccc agaaccacca gccaccccaa ccaagttcgt
     7561 agtatgccca ccaagaacca agcacgatac cgagcgttaa aaatacccac gctgccattg
     7621 tccacggacg agaccatctt gcccacgcag tatctaaacg ccctgtcatc agtgaggcaa
     7681 tcgcaaaagc aaaggcaacg gagaaaccca catagcccat ataaagcaac ggtgggtgga
     7741 agatcaagcc cacatcttgc agcattgggt ttaattcttt gccatcaatc ggaaaatttg
     7801 ggaaagttct atcaaacggg ttggaggtaa aaatcacaaa catcaaaaag ccgatgccaa
     7861 tgacccccat tagtcctaac actcgagcaa cggcatcttc cggcatttta cgggtaaagg
     7921 ttgctacccc gacagaccaa agcgacaaca accaaaccca aagcaataat gagccttcgt
     7981 gagcgcccca caccgcagat aaacgatatt gcaacggtaa acggctattg gagttgttca
     8041 ccacatattg cacggtaaaa tcattcaccg caaacagata aaacagcgaa ccaaaagaga
     8101 cagtcaatgc caaaaacatt gcccaagtca tcgggcgggc aagagcaatt aaggtgctat
     8161 tttgcttttc tgctccccaa agcggtaaaa ctgccaacaa gatagaaatc gctagggcta
     8221 atgccaacgt ataattgcct aattctgcaa tcatttgctt tccccttgca cattgttggc
     8281 tttttctgct tccgcctcgg ctttcatttt gcggtcggtt tccgattcac ctttcagatc
     8341 ttgttcagac acacctgatt ttttatgctg ttcttttaat ttatcgccta attccggtgg
     8401 catatagttt tcatcgtgtt ttgccagaac ttccgtagct tttaaacggg ttggttcaat
     8461 caacacgcct tgtgccacaa tgccttgccc ttcacggaat aaatccggca aaattccttc
     8521 gtattccacg gtaatcgaag gcccgatatc attgagatca aatactactt ttaaactttt
     8581 atcatcacgc tttaccgtat cttccactac cattccgccc acacggatac gctgaccaac
     8641 ttcaggcttt tgtttcggat catcattttt accgtttaca atttcagacg gcgtgtaaaa
     8701 cagatcgata ttttggctta acgcataaag tgtcaagcct gctgcgacag aaagcccaag
     8761 taatatcgaa accaccactt ttaatcttga tttgcgtctt ggattcatcg taatcaccct
     8821 tcaaaataaa tgcaaaattg cataaaaact caaaaataaa ttagtgtaag aatagcaaaa
     8881 aaccgcaaaa cattcccgat atttcaagga agttttgcga tttctcaaat caaataccta
     8941 taaagaagta tgaggctatc gttgcaaaaa ataaagttat ttcgaccgct tgtttattgt
     9001 gatgtttgct ttaatttttc ttcacgcaca atctcttttt ttgcttgagc caaaatcgct
     9061 ttctgttcac ggcgactaag ccaaatcagc ccaatcattg caatgaaact gacaccataa
     9121 gagagccata cataaaagcc gtagccaccc attgcaaaaa aatcgctgat tgattcaaat
     9181 tgaaatgtca ttgttctctc ctactctaaa ctgattttgc cagttgtttt acccaagggc
     9241 gattacgttc gtcctttaat aaggcaatgc gataacgcca aatgctaaac caagcggtaa
     9301 aaattaagct accgaaaatc gccaatagca acggaattaa catttccacc gccatagacg
     9361 gtttatcgaa tttagtgatg gtcgcccctt gatgcaaggt gttccaccat tccaccgaaa
     9421 agtgaataat cggcaagtta atcacgccaa caactgacag cacagccgcc gctttggctc
     9481 cggtttgtct gtcttggaat gcggaataaa gagccatcac gccgatataa aggaaaaata
     9541 acactaaagc ggaggttaaa cgagcgtccc acacccacca agtcccccac attggtttgc
     9601 cccaaattgc accggttgca agtgaaataa aagcgaatac taagccgata ggtgccattg
     9661 aaatcatcgc caagttagct tggcgaattt gccaaaccaa tgccaccaag cctgccaccg
     9721 ccattgagcc atatacgccc atcgaccaaa ttgctgccgg cacgtgaata aagataatgc
     9781 gatagctatc gccctgttgg taatctttcg gggcaaaagc caagccccaa acaaaagcag
     9841 ccgctaacat aatcaaactt agccaaccta aaaacggttg gattttccct agcaaatggt
     9901 actgcgtttc cgattttgca taagggtgta gccatttcca catatatttc tccaaagtaa
     9961 ataattcccc tcacccgttt acaggagagg gacgatttga gcttcgttca gaagcgaaaa
    10021 tcagggagag gggaaaaagt tgcaaatttt cataataatt cgaccgcttc ccctctctct
    10081 gaaaaacacc tctgaacgag gtgtttttcg gtctctctcc ctcaagaggg agagaggaag
    10141 ttttagttca aactaattct taatgcaccg gcaatcgcaa acggcgaaaa agttaaagta
    10201 accgctaaaa ttgctccgat aatcgccagt tgtccgctat aacccatatt taaggtggcg
    10261 gcttctaata ccgcagcggc aaaaatcagt accggtaaga ataacgggag gattaataaa
    10321 ctcagcaacg taccgccctt gcgtaagccc acagtgagtg ccacgccaat cgctcctaag
    10381 cagcttaaaa tcggggtgcc gagtaataat gtcagcacta acgcccacca aacgtgggtt
    10441 tcaagtgaaa gcaaaatggc agcaatcggt gaaagtaaaa tcaacggtaa gccggtcagc
    10501 agccagtgag caatcacttt cgctaacgca acctgcggca aggcaagcgg cagtaacatt
    10561 aattgctcga gcgaaccgtc taaataatca tcacggaata accgctcaaa ggaaagcaat
    10621 gcagaaagca aagcagctac ccacgcaatg ccgccggcaa ttttgcctaa taattcgggg
    10681 ttaggtccca ttaaaatcgg gaatacggta atcaccatta aaaaaaacca caacggattt
    10741 aaaatctccg agggtttacg aaaggcaatg gtgagttccc gctgaataat agtcaataaa
    10801 atcatacttt aaattgatct aacgaaataa tacgcacttt gtcgctttca gcagcctggt
    10861 ggctggtaaa aatcactaat ctgccttgct cgcaatgctg ttcaatatga gcaatcagat
    10921 ccgccacacc ctttttatca atagcggtaa agggttcatc taaaatccaa agtttggcgt
    10981 tagtgagcca caattttgcc aacgccacac ggcgttgctg accggctgac aaatgcgaac
    11041 aaggcaaatc ttcacgcccg atgagcgaca ctttcgtcaa tgcgtgccaa agggcatcat
    11101 catcttgcgg taactgttgg attttctggt agaaacgcaa attttcccac ggtgttaatt
    11161 ccggttttac ccccgaataa tgccctaaat aaaatagttc agaataatag tgatcacgct
    11221 gtttttgaat tgcaatatcg ttccacagca cctcaccttc cgcaggtaaa aaaagcccgg
    11281 ctaaaatacg taacaggctg gtttttccaa tgccgttatg cccttcaatc tgcacccatt
    11341 caccactttg cacggtaaaa ctgcaccctt caaacaaacg ggtttcgccc cgttcgcagg
    11401 caatctgatt aagtttaagc tgatattggg ccgtttggtt cattattttt catctggttg
    11461 aacattttag ccgaagtgta tcataagcct ttgatttaac gtagcaaata aattacttct
    11521 ttagaggtag caagcggtca aattttcaaa aagttttgca aattttgata agaatcaaac
    11581 cgcttgttac agagagagga tttccttcac aaaaggaatg gttaatttac gctgggcttg
    11641 gagagacgct ttatccaact tatccaatat tttagagagt tgctctaaat ccgttcccgc
    11701 tttttttaac agaaaatgag cgacctcatc ggacaattcc accccttttt ggtgagcatt
    11761 taactgtaaa atttggcatt tttgttcatc ggttaaatcg tttagctggt acacttcgcc
    11821 ccaagttaag cgggaacgta aatccggcaa ttggatattg agttggtgtg gtgggcaatc
    11881 ggcactgatt aacagcaagg ttttttgccc ttcgttaaac aagccttgtt gttctcgaat
    11941 ttggttaaac aggttaaaaa tagcaagttc ccattcagca tctcctgcaa tcgcttgaat
    12001 atcatctagg caaatcacat tcagcagttc ggcattatct aacaccaacg gcgagaaata
    12061 attggcttta gtgagcggaa tataactaga agtttggtta tttaaaagaa agtggttact
    12121 tactgctttc aacaaatgac ttttaccgca gctcttaccg ccccaaatgt aaaaaaacgg
    12181 ctgttgaaca tccgtaaaat ttcgtttgag ggatccaagc aacacttcgc tgttttggct
    12241 ataaaaattg tcgaaagtgt cttcatcaat ttgatgaatg ggtagaggta actgcaaggc
    12301 tttccttaaa tctctaagtt tgatattttt ctaagaatag cggaaaagca ggggtttgag
    12361 aagtaaaaat agtgagaaaa tatccactca tttttctaat gaagagatga caagcggttg
    12421 aatttccaca taattttgtc aatctgaccg aaaacccacc gttttgtgtt aaaaaaagat
    12481 tgcagttagc tcaaaaaatt gtatattcaa agctttctac ttaaaaagta gagtaaaaca
    12541 actattacaa acacaacgga gtgaatatga aaaacatgac taaattatcg ctaataacat
    12601 tagcgctagc cgcttcaagt agcgtctttg ctgcaccgaa aacctttgtt tactgcttag
    12661 aggcttcgcc ttcagcatta agcccagtgc tatcaacaga cggtgcaagc tttgatgtga
    12721 acgccctccc gatttataac aaattaaccg actttgaaga cggtacaact aatgttattc
    12781 cctctcttgc cgaaaaatgg gacatttcgg aagacggcaa aacttacacc ttccacctgc
    12841 gtaaaggcgt aaaattccac gacaataaag aatttaaacc aagccgtgag ttaaatgcag
    12901 acgatgtagt gttctccatt aaccgtcagt ttgatccaaa ccatccattc cacaaagttt
    12961 ccggcggtaa ctacgaatac tttatcggta tggatatgca aaatattatc gataaagtgg
    13021 aaaaagtgga cgatcacacc gttaaaatca gcttaaaagt gccaaatgcg ccgttcttag
    13081 ctaacttagc gatggatttc aacgccgttt actcagcgga atatgcagag caatccttaa
    13141 aggccggcaa gcctgagcgt attgatacca acccaatcgg cagcggcccg ttccagtttg
    13201 tggattacca aaaagatgcc accgttcgtt acaaagcctt tgaaaactac tggcaaggca
    13261 cagcgaaaat tgaccgctta gtgtttgcaa ttactccgga tgcatcggta cgtttagcca
    13321 agttacaaaa aggcgagtgc cacgcaatgc cttaccctaa cccggctgat atcgaagatc
    13381 tgaaaaaaga tccaaatatt gaattaatga gccaatctgg aatgaatatc ggctatttgg
    13441 cattaaattc atcgattaaa ccattagata accaaaaggt acgtcaagca ttaaatcacg
    13501 ctgtaaacaa acaagcgatt gtagatgcgg tatatcaggg agccggtcaa gtagcgaaaa
    13561 acccaattcc accaacaatg tggagctata atgaagcggt tcaagactat gactacaacc
    13621 ctgaaaaagc caaagcattg ttaaaagaag ccggttttga aaatggtttt gatactgaac
    13681 tttgggcaat gccggtatca cgtccatata acccgaatgc tcgccgtatg gctgaactta
    13741 tccaagaaga ctggaaaaaa gtgggcgtga atgcgaaaat cgtcagctat gaatggggcg
    13801 aatatctcaa acgcttacgc caaggtgaag cggcaacctc aatgattggc tggacaggcg
    13861 ataacggtga cccagataac ttcctcaaca ccttattaag ctgctcagcg gtggaagccg
    13921 gttcaaacta cgccaaattc tgccacaaac cgtttgaaga agtcgtgctt ggtgctgccc
    13981 aagaaagcga caaagcaaaa cgtaccgagc tttataaaca agctcaagtg atcttcaaag
    14041 agcaagctcc ttggattacg attgctcact ccaccgttta cttcccggtg cgtaaagaag
    14101 taaaaggtta tgtgatgagt ccgttcagct tacataactt ctacaaagta gatttagcgg
    14161 ataaataatc cgccaacaag cggtagaatt tgcagatttt tttacaaatt tgaccgcttg
    14221 tcctcccctc tttgaactac gaggggcagg ggggaaattt ggcagaagcg attgccgaag
    14281 tgagaggatt gtaaaagagg aaataaattt tctgtcttat tgattatttt cttcgttaat
    14341 tactactgtc aaatctcccc taccccctct ttgctaaaga ggggaatcag atcgagagat
    14401 cagacaactt tgatgaaaat ccaacctaag agattttaaa tgttttcatt tattttaaaa
    14461 cgtgtgctaa tggtgatccc tacctttata gcgattacgt taattacttt tgcccttgtg
    14521 cattttatcc ccggtgatcc aattgagatc cgaatggggg aacgtggatt atcgcctgag
    14581 gttcatcaac aaatgatgga acaactcggg ctgaaccgac cgttgtttga acaatacatc
    14641 agctacatca aaggtgtatt gcacggtgat cttggtaact catttcgtaa caacgaaccg
    14701 gtgctgaagg aattttttac cctattccca gccacggttg agttggcatt ttttgccctg
    14761 ctctggtcgt tgattttcgg cattattctc ggtgtgattg ctgcggtgaa aaaagaaagt
    14821 tggatttcac acactgtaac cacgctttca ctgaccggct actcaatgcc aattttctgg
    14881 tggggcttga ttttaattct ttatttctcc accccgctcg gcttaccggc ttcaggtcgt
    14941 ttaccatctg aatactggat tgaagccgaa accggtttta tgctgattga tacttggaat
    15001 tcggacgaac caggggcatt tttagcggca attaaatctc tgattttgcc gtctatcgta
    15061 ctggggacaa tccctcttgc agttgtgacc cgaatgactc gctcttcaat gttggaagtg
    15121 ttgggtgaag actatatccg caccgccaaa gccaaaggct taaacactac ccgaattgtg
    15181 attgttcacg cattaagaaa tgccttgatt ccggtggtaa cggtcgttgg cttaattgtc
    15241 gggcaactgc tttcaggagc cgttttaacg gaaaacatct tctcgtggcc gggtatcggc
    15301 aaatggatta ttgatgcaat caacagccgt gattaccctg tactacaagg ctcagtgctg
    15361 attattgcta ctattattat tttagtgaac cttacggtag atctactcta tggcattgtc
    15421 aatccgagga ttcgacatag ttagaaaaat tccttcgatt tttcccctct ttagcaacga
    15481 gggagttaca caagcggttc aaattccgca attttttaca agattatttt tagttggagt
    15541 taatgatgtc aggaataacg gcggtaaatc cacccgcacc caaaacaccg ttacaggagt
    15601 tttggtacta tttttgtcaa aatcgggggg cattaatagg acttaccttt attgcaatcg
    15661 tctttgttgc gtgcgtattc gcaccttggg ttgccccttt tgatccaatc gaacaaaatc
    15721 gcagtgcgtt attgctccct cctgcttggc ttgaaggggg gaattccgct catctgctgg
    15781 gtactgacga tattgggcgt gatattcttt cccgtattat ttatggttca agattgtccg
    15841 tctttatcgg cttagtcatt gtgctacttt cttgcgtatt cggcgtgatt ttaggtctac
    15901 ttgctggcta ctatggtggc acactcgaca tcatcattat gcgttttgtt gatattatgc
    15961 tggcgattcc aagcctgctt ttaactatcg gcgtggtcac tattttaggc ccttcattga
    16021 taaatgccgc tattgcgatt gcgattgtct ccattccaag ttatgttcgc ttgacccgtg
    16081 cttctgtatt aagcgagaaa aaccgtgatt atgttactgc ttctcgtgtt gctggtgcga
    16141 gcgtgcttcg cttaatgttt gtggtgattt tacctaactg tttagctccg cttatcgttc
    16201 agatgacgat ggggatctca aacgctattt tagaacttgc cgccctcggc ttcttaggca
    16261 ttggtgcaca gccgccaaca ccggagcttg gcacaatgct tgccgaatct cgtggcttta
    16321 tgcaatcggc aaactggctg gtgaccattc cgggtctagc gattttatcg ttagtattag
    16381 ctttcaactt aatgggtgac ggcttgcgtg acgccctcga tccaaaactg aaacaatagg
    16441 agatctaaaa tggcattatt aacggttgat caactttccg tccattttgg tgaaactaaa
    16501 acaccattta aagcggtgga tcgtatcagt tacgaagtca atgaaggcga agtattaggc
    16561 attgtgggcg aatccggttc aggaaaatcg gtaagttctc tcgctattat gggcttaatc
    16621 gatttccccg gcagggttat ggctgaaaaa ttgtatttta acggcaatga tttattggca
    16681 ttaaaaccaa aagaaaaaca acagattgta ggggctgatg tctcaatgat cttccaagat
    16741 gcaatgacca gcttaaatcc gagctatact gtgggctatc agattatgga agccctaaaa
    16801 gtgcatcaag gtggctcaaa agccagccgt cgtgagcgag cgattgagtt gctgacgatg
    16861 gtcggtattc ccgatcctga atcccgttta gaagtttatc cgcaccagct ttcgggtggt
    16921 atgagccaga gagtgatgat tgcgatggcg attgcctgtc gcccgaaatt attgattgcc
    16981 gatgagccga ctactgcgtt agatgtgacg attcaagctc aaatcattga tttattactt
    17041 gaattacaac gcaaagaaaa tatggcgttg attttaatca cgcacgattt agcgttagtt
    17101 gccgagtctg cccatcgcat tatcgtgatg tatgcagggc aagtcgtgga agagggcaaa
    17161 gccgagcaga tattcaaagc accactgcac ccttacaccc aagcattgct caaagcctta
    17221 ccggaatttg ccgaagggaa atcccgcctg caatcactac cgggcgtagt gccgggcaaa
    17281 tatgaccgcc cacaaggttg cttactcaac cctcgctgcc cgtatgcaac cgaaaaatgc
    17341 cgaaccattg aaccggcaat gcagataatc aacggcagac aggtgaaatg ccacacgcca
    17401 ctgaatgcac agggtgagcc gataaggata gctgtataac gtcataaaga gtagggacgc
    17461 aatgcttcgc gtccgttaca agcggtgatt tttaaccgat ttttgcaaaa taacgatagt
    17521 ggacgcaaag cattgcgtcc ctacattttc cgagaaggaa aacagaatga aagaaaataa
    17581 ttctctccca ccattcctca aagcagtgga cttaaaaaaa tactacccag ttaaaaaggg
    17641 aatgttcgct aaaccgaaaa cggtaaaagc gctggatggt gtctctttta cccttgaacg
    17701 tggcaaaacc cttgcgattg ttggcgaatc cggctgtgga aaatcaactt tggggcgaat
    17761 gctcactatg attgaaagcc caaccgaagg tgaactgttc tacaacgggc agaatttctt
    17821 agtcaatgac aaagaaacgg ctcaactacg ccgtaaaaaa atccaaattg tgtttcagaa
    17881 cccgtatagc tcgctcaatc cacgcaaaaa agtaggtagc attttagaag aaccattatt
    17941 gattaacacc aacttatccg caaaagaacg caaagaaaaa gtgttggaaa tgatggcgaa
    18001 agtcggctta aaaccggaat tttacgaccg ttatccgcat atgttttcgg gcggacaacg
    18061 ccagcgaatt gcgattgctc ggggcttaat gttgcagcct gatattgtgg ttgccgatga
    18121 acccgtttcc gcattagatg tttcggttcg ggcgcaagtg ttgaatttga tgatggattt
    18181 gcaagaagaa atgggcttgt cttacgtttt catctcgcac gatttatccg tagtggaaca
    18241 tattgccgat gaagtgatgg tgatgtattt agggcgttgc gtagaacaag gggataccaa
    18301 aactatcttc agcaatccac gtcaccctta tacacaagcg ttactctccg caacccctcg
    18361 tttgaacccg gagcaacgcc gtgagcggat taaactgact ggcgaactac caagcccgct
    18421 taatccacca aaaggctgtg cctttaacgc ccgttgcaga tttgcaaccg atcgttgcta
    18481 tgtggagcga ccagagctga aaacctatca agacggtact cgcattgctt gttttgtggt
    18541 ggaggaaaat aattaggcaa cgctcgctat ttaaaaggtt aaagtttttc aactttaacc
    18601 tttatttttc atacttaata ctcctcatct tttgtagcaa aatctttcat taatttgctg
    18661 atatgctcac aatggtgttt aaatgacaat acgggcaaat aatcaaatgc gttttaacgc
    18721 caatcttctc ttttaaagtg agttttcgtt cctttgagtc agaaattaac cttgttactt
    18781 gtcggcaatt catctatttc tctccgttaa tttccttgaa agacattgtt gtaactgcag
    18841 ccttgctcga tagattaatg tatataaatt atctgatgta atatttacta ctcgacaaat
    18901 ttcatctgag gttgcctcta aatattccct catcataaat accctagctt gttttgcagg
    18961 taaattgctt aagcaaactt caaataatat ccaaaattct ttggaataaa cagcttcttc
    19021 ctgccagcta gaaggataat attcttcttt ccaatgccca taattatcaa aaaagtgatt
    19081 ctcttcgtca tcatcagcta gatcactttc tagtactata cgatcttttt tacgtaaata
    19141 atcaataatt ttatttttta gaatagcaaa tatccaggtt ttcaatgctg ctttacgctg
    19201 gaaattatca atatttttta ttgcattaac gaatgcttct tgaaccatat cttcagcaag
    19261 agcaatatct tgtaattgta actgagcaaa tttcaacatt tgctgacgaa tatcggcaag
    19321 ctgttccgat gaaatatcta aagaaatctt gttatgaatc atagtgtt
//
LOCUS       DANLXD010000047        19021 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.047, whole genome shotgun sequence.
ACCESSION   DANLXD010000047 DANLXD010000000
VERSION     DANLXD010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19021)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19021)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19021
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.047"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            31..714
                     /locus_tag="PXD18_001345"
     CDS             31..714
                     /locus_tag="PXD18_001345"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011201466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HDL6301781.1"
                     /translation="MQLVFIRHGFSEWNAKNLFTGWRDVNLTERGIEEAKSAGQKLKA
                     AGFEFDIAFTSVLTRAIKTCNIVLEESDQLWIPQVKNWRLNERHYGALQGLDKKETAE
                     KYGDEQVHIWRRSYDISPPDLDPQDPNSAHNDRRYANLPKDLIPNAENLKITLERVLP
                     FWEDHIAPALISGKRVLVTAHGNSLRALAKHIEGISDADIMDLEIPTGQPLVYELDDN
                     LKVISKRYL"
     gene            complement(851..1408)
                     /gene="frr"
                     /locus_tag="PXD18_001346"
     CDS             complement(851..1408)
                     /gene="frr"
                     /locus_tag="PXD18_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HDL6301782.1"
                     /translation="MINEIKKDTQDRMEKSLEALKGHIAKIRTGRAQPSLLDGIQVEY
                     YGSATPLRQVANVVAEDARTLAVNVFDKSLISAVEKAILTSDLGLNPSSAGTTIRVPL
                     PPLTEERRRDLIKIVKAEGEQGKVAIRNVRRDANDQIKALLKDKEISENEQHKAEEDI
                     QKITDTFIKKVDEVLAAKEKELLDF"
     gene            complement(1460..2176)
                     /gene="pyrH"
                     /locus_tag="PXD18_001347"
     CDS             complement(1460..2176)
                     /gene="pyrH"
                     /locus_tag="PXD18_001347"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HDL6301783.1"
                     /translation="MSKPIYKRILLKLSGEALQGSEGFGIDPSILDRMALEIKELLAE
                     GVEVGVVLGGGNLFRGAKLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAEVNAKLM
                     SAFQLNGICDTYNWSEAIKMLREKRVVIFSAGTGSPFFTTDSAACLRGIEIEADVVLK
                     ATKVDGVYDKDPAKYADAKLYNKLTYAQVIEQELQVMDLAAFTLARDHGMPIRVFNMG
                     KPGALRNVVFGTEEGTTISE"
     gene            2268..3830
                     /locus_tag="PXD18_001348"
     CDS             2268..3830
                     /locus_tag="PXD18_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HDL6301784.1"
                     /translation="MKSKQLFGILVAISLATAASCLMLIGSGFFPNPSIFEVILGVFL
                     IIALASSKWTYYLLLLPISIAYAIYTPVGIKFGKPTYEYIASIFATDMMESKEFIAQL
                     PILNIAAGIAIVLAVIFYRKITNRYQIRFLRNKTFVISAFVLMLFSLAPFKFFQEFYN
                     SSLKVKKELEVLNNLTLDSQWGQSTLSSTSNYDDYVLIMGESARKDYHHAYGYPAANT
                     PFMSSAKGTLIDGLTSGGTNTIASLRLMLTKPDTEKWEANYGLTLIDLIKSTGIKTYW
                     ISNQGYLGNYDTPISSIGNKSDVKIFTKAGDSLNTNVSDFELLPHFAKVIEEPAQGKR
                     FIFLHLYGSHPITCDRLTDYPKMFDDDKLPKRYFNVNCYVSSIKKTDELLKRVYDLLV
                     KNQENHQRSFSMVYLSDHGLSHEVSKENIVIHNGKDRSKLHYDIPLFKISSDDTQRNE
                     YKAFKSGLNFTNGIANWIGIENPLLDKEINLFNEQNDKSDYGLKKIIETQSTVEDPAV
                     PIPESYLYKATN"
     gene            complement(3894..4745)
                     /gene="tsf"
                     /locus_tag="PXD18_001349"
     CDS             complement(3894..4745)
                     /gene="tsf"
                     /locus_tag="PXD18_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HDL6301785.1"
                     /translation="MAEITASLVKELRERTGAGMMECKKALVEANGDIELAIDNMRKS
                     GQAKAAKKAGRVAAEGVILARVASGFGVLVEMNCETDFVAKDAGFLELANEVADFAVA
                     NKGTTIEALQAQFEEKRAALVAKIGENMNIRRVQYLEGEVIAQYLHGAKIGVLVAGAG
                     SEDELKKVAMHVAASKPEFVNPEDVSADVVAKEREIQIEIAMNSGKPKEIAEKMVEGR
                     MAKFTGEVSLTGQPFVMDPSQSVGQYLKSVNTSVSNFIRLEVGEGIEKVEEDFAAEVA
                     KITGGNA"
     gene            complement(4841..5560)
                     /gene="rpsB"
                     /locus_tag="PXD18_001350"
     CDS             complement(4841..5560)
                     /gene="rpsB"
                     /locus_tag="PXD18_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005645552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HDL6301786.1"
                     /translation="MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLE
                     KTLPLFNEALAELTRIASNNGKVLFVGTKRAASDAVKAAAVESQQFYVNHRWLGGMLT
                     NWKTVRQSIKRLKDLETQTQDGTFDKITKKEALMRTRELEKLELSLGGIKDMNGLPDA
                     IFVIGADHEHIAIKEANNLGIPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDSAV
                     AAIKEGRGVETVEVAEEASAE"
     gene            5905..6933
                     /locus_tag="PXD18_001351"
     CDS             5905..6933
                     /locus_tag="PXD18_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL6301787.1"
                     /translation="MKKTLSALAIAAATFTSTSTLAANEVNVYSYRQPYLIEPMLKNF
                     EKDTGIKVNIIFADKGLVDRVKQEGELSPADVLLTVDISRVMEIVNADLAQKIDSKVL
                     EKNIPAQFRDSNDQWFGLTTRARVIYTSKDRVGKLPAGFDYLDLAKPEYKGKVCVRSG
                     KNSYNVSLFAAMIEHYGIEKTKAFLEGLKANLARKPQGGDRDQVKAIKEGICDYSIGN
                     SYYYGKMLDDEKQKSWAEAAIINFPSGEHGTHKNISGVVIAKHSPNKANAVKLIEYLS
                     GEKAQGLYAELNHEYPVKEGIEPSAIVKGWGTFKSDTIKLEDIAKNYEAALKLVDEVK
                     FDDFSEKK"
     gene            7056..8702
                     /locus_tag="PXD18_001352"
     CDS             7056..8702
                     /locus_tag="PXD18_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL6301788.1"
                     /translation="MRSQFCWKSIAALTTFIVLLPLIAICYHALQGDNENLAHLWQTM
                     LPIYLKNSTLLVLGTVFLALIFALPTAWIVANYRFWGQRTLQWLLCLPLAMPAYLIAY
                     LYTDLLDYSGAFQGWLRSIFGWTHPQDYWFPQIRTLYGACFVLALVLYPYIFLLVRVA
                     LLEQSENLTHSAKMLGASPSQLFRRITLPLIRPSVAVGIALVAMETLGDFGTVAYFAV
                     PTLTTAIYDSWLGYHDLGTASQIAIFMLLMIFLFLSLEQYSRRKQKSYQRGYEKKSAF
                     KFLTGWKLALALAWCWGLLALAFFIPFGRLLYWAYDYFEQAWNLDFVQFSLNSLKVSI
                     IASVITVLIALLLHFSKRLNTRKILVKNDRLSLQLASLGYAVPGTVLAIGLLSPLTFA
                     DHQLHAWLKSLELSPVGLIFSGSLFALVLAYTIRFLAMAIGSLETSLNKISPSLDMAS
                     QTLGKNGSAMLVKIHIPLIYKGILTAGLMVFIESMKELNASLLLRPFNFDTLATYVFT
                     FTSDEQLERAALPAIVLVLVGLLPVIWLTRSLISQSEKER"
     gene            8712..9722
                     /locus_tag="PXD18_001353"
     CDS             8712..9722
                     /locus_tag="PXD18_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6301789.1"
                     /translation="MSVLTINHLNLNFGSTKVLQNLHLAVNQNEIICLLGASGCGKTT
                     LLKAIAGLLPIEQGDIHLAGECLKSKAVEERQIGLIFQDYALFPHLTVADNIQFGLSK
                     LPKVQQKAITEKMLSVVHLQGFESRFPHELSGGQQQRVAIARALACQPELLLLDEPFS
                     NIDSQTRYAMIQEIKQILKSQNVPAIFVTHSKEEAFAFADKIAVMDQGKIIQFGKPNE
                     LYHSPVNPFVADFLGGTNYLNCNVTEDNVLCSPIGEFRLFPEMNVQKGRYRWLLRPEQ
                     IILKPNELGLGKVVGKLFLGLYYRYQVEIKGIEIVTYQSQELKIGEQVEVGFQVREFI
                     LF"
     gene            9732..10358
                     /locus_tag="PXD18_001354"
     CDS             9732..10358
                     /locus_tag="PXD18_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HDL6301790.1"
                     /translation="MKIEVWSDYACPFCYIGKRHLEQALAQFEGEVEVVFRAFELDPH
                     ANGEPEGDIQQRLMRKYQKTAEQADEMIRYVEQAGKQAGLDLRYRTTQYTRTFEAHRL
                     AKFAESKDLGEAMVERLFKAYFTDNTILAKRTELISLALDIGLERDEIAQLLTGDDFG
                     HEVREDERVAHKYGIHSVPFFVINEKLGVSGAQPPEILLDAIKQALQK"
     gene            complement(10420..11910)
                     /locus_tag="PXD18_001355"
     CDS             complement(10420..11910)
                     /locus_tag="PXD18_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 domain-containing protein"
                     /protein_id="HDL6301791.1"
                     /translation="MSLYQIARTETGKVISLNAKMANRHGLIAGATGTGKTVTLRKLA
                     ESLSDDGVPVFLVDVKGDLSGSVQAGNFSGKIAERILQFNLGGEDYLKGYPVSFWDVF
                     GTSGIPLRITISEMGPMLLSRLLNLNDTQGGLLNLVFRVADDRGLLLIDLKDLRALLK
                     FVADNAKEFQLEYGHISAASVGAIQRALLRLENEGADNLFGEPALDLHDWIQTRNGRG
                     VINMLNAEKLINSPRVYSAFLLWFMAELFENLPEVGDPEKPTFVLFFDEAHLLFDDAP
                     KALVDKIEQVVRLIRSKGVGVYFVTQNPLDIPDSVLGQLGNRIQHALRAFTPRDQKAV
                     KSAAETFRANKEVNVVEAITQLGVGQALVSVLDEKGMPTPVEIAYIYPPKSQLAPLAT
                     GERDSLVKQDDLYHHYSQYVDNESAFELLNAKAEAIKAEQAAAEEANNDFFGGILSSI
                     FGSKKKKDQSITEQVVSQVAHSVGRNLRNQVTKQIMRGILGAITKK"
     gene            complement(11969..13204)
                     /gene="rhlB"
                     /locus_tag="PXD18_001356"
     CDS             complement(11969..13204)
                     /gene="rhlB"
                     /locus_tag="PXD18_001356"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlB"
                     /protein_id="HDL6301792.1"
                     /translation="MSNHLTEHRFIDFPIHANVLNALDSKGFEFCTPIQAKTFPITLK
                     GKDIAGQAQTGTGKTLAFLIATFNHLLNNEIETSKNQPRALILAPTRELAVQIGADAE
                     LFLKHSDLKLALAYGGDGYDKQVQEIEKGVDILVGTTGRVIDYVKQGIINLDKIQVIV
                     LDEADRMFDLGFIKDIRYLMRKAPKPSERLTLLFSATLSAKVRELAYEDMDNAEYIEI
                     EPLQKTGHRIKEELFYPSNEDKMALLLTLLEEEWPERCMIFANTKHKCEEIWQYLSAD
                     GHRVGMLTGDIPQKKRLSLLDNFTKGNLDILVVTDVAARGLHIPDVTHVFNYDLPDDK
                     EDYVHRIGRTGRAGESGHSISFACERYAVNLPAIEEYIGHQIPVSQYDKESLLTLPKV
                     NRSRSKKTFLAKTKKNSRN"
     gene            complement(13292..14014)
                     /gene="recO"
                     /locus_tag="PXD18_001357"
     CDS             complement(13292..14014)
                     /gene="recO"
                     /locus_tag="PXD18_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HDL6301793.1"
                     /translation="MTIDQWQRAFVLHRREYSENSLLVEFFTEHHGRITLLAKGARRA
                     RSPLKAVLQPFTPLLLRWSGKGDLKTLTKAEPAALTLPMETLSLYSGFYINEVLARVL
                     ENQTAYPELFQHYLRCITELATQKQIEPILRTFEFHTLKALGYGVDFTHCAATGLPVD
                     PKMTYQFQENQGFIASLLQNNQSFLGSDLLAFAQLDFSEKSTQQAAKRFTRMALKPYL
                     GSQPLKSRELFQSILPNKLKSG"
     gene            complement(14244..15161)
                     /gene="era"
                     /locus_tag="PXD18_001358"
     CDS             complement(14244..15161)
                     /gene="era"
                     /locus_tag="PXD18_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013525392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HDL6301794.1"
                     /translation="MTEQIQTPAKTYCGFIAIVGRPNVGKSTLLNKILGQKISITSRK
                     AQTTRHRIVGIHTEDQYQAIYVDTPGLHIEEKRAINRLMNRAASSAIGDVDLIIFVVE
                     GTKWTEDDEMVLNKLRSAKAPVLLAINKIDNIKEKEELLPHITELSQKFDFAEILPIS
                     AQRGKNVHILQKFVRQSLRQGEHHFPEEYVTDRSQRFMASEIIREKLMRFTGEELPYS
                     VTVEIEQFKMNERGVYEINGLILVERDGQKKMVIGAGGQKIKTIGIEARKDMERLFDN
                     QVHLELWVKVKAGWADDERALRSLGYMDE"
     gene            complement(15264..15938)
                     /gene="rnc"
                     /locus_tag="PXD18_001359"
     CDS             complement(15264..15938)
                     /gene="rnc"
                     /locus_tag="PXD18_001359"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HDL6301795.1"
                     /translation="MQLERLQKKLGYQFHNLDYLIQALTHRSAATKNNERLEFLGDSI
                     LNFTIGKVLYDKFPKANEGELSRMRATLVREQTLAIIARKFDLGDYLKLGPGELKSGG
                     FRRESILSDCVEAIIAAIYLDQDMAKAMEKVEDWYSDLLKDISPGDSQKDPKTRLQEF
                     LQGRKLPLPEYDVLDIKGEAHNQTFRVTCKVINVEEVFIGIGTSRRKAEQNAAEKALA
                     VVKTKK"
     gene            complement(15984..16943)
                     /gene="lepB"
                     /locus_tag="PXD18_001360"
     CDS             complement(15984..16943)
                     /gene="lepB"
                     /locus_tag="PXD18_001360"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDL6301796.1"
                     /translation="MAQFMPIIFLGIIYGIWQWLDSMQLPNTISIILVALVIICGGFW
                     AFYKFSADPRRKQAIVLQQKRLGRELTAEEIAEIQPKSAVGEFFASLFGILFFVTVLR
                     SFLFEPFQIPSGSMEPTLRVGDFLVVNKFSYGIKEPIWQNTLIETGKPERGDVIVFKA
                     PAQPHVDYIKRVVAVGGDKIKYDFATQQLTVTKANGETKVFEYSEGKPNPEFFYHGEM
                     QVERTEKGNVTHQILNHPMAFNYAPYFYQQEGQAEGEWVVPQGYYFVMGDNRDNSEDS
                     RFWGFVPERNIVGKATFIWLSLDKKANEFPTGLRFSRMFTSIN"
     gene            complement(17030..18823)
                     /gene="lepA"
                     /locus_tag="PXD18_001361"
     CDS             complement(17030..18823)
                     /gene="lepA"
                     /locus_tag="PXD18_001361"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018345454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDL6301797.1"
                     /translation="MQNIRNFSIIAHIDHGKSTLSDRLIQTCGGLSDREMEAQVLDSM
                     DLERERGITIKAQSVTLNYKAKDGEIYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV
                     DAGQGVEAQTLANCYTAIEIDLEVVPILNKIDLPAAEPERVAEEIEDIVGIDAIDAVR
                     CSAKTGLGIEDVLEEIVKKMPAPEGDAEAPLQALIIDSWFDNYLGVVSLVRVKNGVLK
                     KGDKIKVMSTGQSYNVDRLGIFTPKQVDTTELKTGEVGWVVCAIKDILGAPVGDTLTH
                     HHNPATEVLPGFKKVKPQVYAGLFPISSDDYEAFRDALGKLSLNDASLFYEPETSSAL
                     GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVVQTSGETIYVDSPSKLPA
                     INNIAEIREPIAECNMLVPQEFLGNVITLCVEKRGVQTNMVYHGNQIALTYEIPMGEV
                     VLDFFDRLKSTSRGYASLDYGFKRFQTADMVRVDIMINGERVDALAIIVHRANAAYRG
                     RELVEKMRELIPRQQFDIAIQAAIGNHVIARSTVKQLRKNVLAKCYGGDVSRKKKLLQ
                     KQKEGKKRMKSLGNVEVPQEAFLAILHVGKD"
BASE COUNT         5545 a         4066 c         3503 g         5907 t
ORIGIN      
        1 attaatttta ctcaaagcta aggagtcatt atgcaattag tatttatccg tcacggtttc
       61 agtgaatgga atgctaaaaa cttatttacc ggttggcgtg atgttaattt aacagaacgt
      121 gggattgaag aagcaaaatc tgccggtcaa aaattaaaag cagccggttt tgaatttgat
      181 attgcgttta cttcggtttt aacccgtgcg atcaaaactt gtaacatcgt attagaagaa
      241 tcagaccaat tatggatccc tcaagtgaaa aactggcgtt taaacgagcg tcactacggt
      301 gcattacaag gtttagacaa aaaagaaact gctgaaaaat atggtgatga acaggttcac
      361 atctggcgtc gttcttatga catctctcca ccggatttag acccacagga tccaaactca
      421 gcacataacg accgccgtta tgctaactta ccaaaagatt taattccaaa tgcagaaaac
      481 ctcaaaatca cccttgagcg tgtgttacca ttctgggaag atcatattgc acctgcatta
      541 atttcaggta aacgcgtatt agttactgct cacggtaact cattacgtgc attagcaaaa
      601 cacatcgaag gcatttctga tgcagacatt atggacttag aaatcccaac cggtcagcca
      661 ttagtgtatg aactagatga caacttaaaa gtaatcagca aacgttactt ataattggta
      721 aatttccgat aaaaaataac cgcttgtagt gcaacacatt acaagcggtt attttttgtt
      781 aattttttgc aaatggcaaa gaacaaaaat aaaggcgaat catacattcg ccttattgtt
      841 ttaaagtaga ttagaaatct aacaactctt tctcttttgc tgctaatact tcatcaactt
      901 ttttaatgaa ggtatcggtg attttttgaa tatcttcttc agctttgtgt tgttcgtttt
      961 cgctgatttc tttatctttt aataacgctt tgatttggtc attagcatca cgacgaacat
     1021 tacgaattgc cactttgcct tgctcacctt ctgctttaac gattttgatt aaatcacgac
     1081 gacgttcttc cgttaatggt ggaagcggaa cacgaatggt tgtgccggca gaagatgggt
     1141 ttaaacctaa atctgaggtt aaaattgctt tttctaccgc agagattaaa gatttatcaa
     1201 atacgtttac cgctaaagta cgggcatctt cagctaccac gttcgctact tgacgtaatg
     1261 gagtcgcaga gccgtaatat tccacttgaa taccgtctaa taaagaaggt tgggcacgac
     1321 ctgtacgaat tttcgcaata tgccctttta aagcctcaag gcttttttcc atacgatctt
     1381 gggtatcttt cttgatttcg ttaatcattg attttttatc cttttattta gtaactgaga
     1441 gttaaacaga gaaaattaat tattcagaaa tggttgtacc ttcttcagta ccgaatacca
     1501 cattgcgtaa cgcccccggt ttgcccatat taaagacacg aattggcatt ccgtggtcac
     1561 gagcaagcgt gaatgctgct aagtccatta cttgtaattc ttgctcaata acttgcgcat
     1621 acgttaattt attatatagt tttgcatctg cgtattttgc tgggtcttta tcataaacgc
     1681 catcaacttt agttgctttt aataccacat cagcttcaat ttcaatacca cgcaagcaag
     1741 cagctgaatc ggtggtaaag aacgggctac ctgtaccggc agagaaaatc accacacgtt
     1801 tttcacgcaa cattttaatt gcttcagacc agttgtaagt gtcgcaaatc ccatttaatt
     1861 ggaacgcaga cattaattta gcatttacct ctgcacggtg taaggcatca cgcatagcca
     1921 aaccgttcat tacggtggca agcataccca tatggtcgcc cactacacgg ttcattcctg
     1981 ctttggctaa ttttgcacca cggaataagt taccgccgcc aagtaccaca ccaacctcaa
     2041 cgccttcagc aagtaattct ttaatctcta acgccatacg atccaaaata gacgggtcga
     2101 taccaaaacc ttcactgcct tgtagggctt caccacttaa tttgagaaga attcgcttat
     2161 aaataggttt gctcatttta attgcctctt aactgtatgg actaaacaca aaattacgtt
     2221 attatagaac aatccaatat aacgataaac taaaaatatt cactacaatg aaatccaaac
     2281 aacttttcgg cattcttgtc gctatttcgc tggcaactgc tgctagctgt ttaatgctaa
     2341 tcggatcagg cttttttcca aatccgagta tctttgaagt cattttgggc gtattcctca
     2401 tcatcgctct tgccagctct aaatggactt attatttact cttactgcca atcagcatcg
     2461 cttatgcaat ttataccccg gttgggataa aattcggtaa accgacttac gagtatatcg
     2521 cctctatttt tgctaccgat atgatggaaa gcaaagagtt tattgctcaa ctgccgattt
     2581 taaatattgc ggcgggcatt gcgattgtac tagcggtcat tttttatcga aaaattacca
     2641 atcgctatca aatccgtttt ttacgcaata aaacattcgt gatttcggct tttgtattaa
     2701 tgctgttttc ccttgcaccg tttaaatttt ttcaggagtt ctacaattcg agcctaaagg
     2761 taaagaaaga attggaagtg ctgaacaatt taacgctaga ttcacaatgg ggacaatcaa
     2821 ccctcagctc aacttcaaac tacgatgatt atgtactgat tatgggcgaa agtgcgagaa
     2881 aggattatca ccacgcctat ggctatccgg ctgccaatac gccttttatg agttcggcaa
     2941 aaggaacctt gattgacggt ttaacctccg gtggcacaaa cactatcgcc tcattacgct
     3001 taatgctcac taagcccgat acggaaaaat gggaagcaaa ttatgggtta accttaattg
     3061 atttaatcaa atctaccggt atcaagacct attggatctc aaatcaaggc tatttgggca
     3121 attacgatac gccgatttcc tctatcggta ataaaagtga tgtcaaaatt ttcactaaag
     3181 ccggcgattc attaaatacc aatgtgagcg attttgaatt gttaccgcat tttgctaaag
     3241 tgattgaaga acctgctcaa gggaagcgtt tcatctttct gcatttatat ggctcgcatc
     3301 ctattacctg cgatcgtctc accgattacc cgaaaatgtt tgacgatgac aaactgccaa
     3361 aacgctactt taatgtaaat tgctacgtgt catctatcaa gaaaaccgat gaattgctga
     3421 aacgggtata tgatttgcta gtgaaaaacc aagaaaatca ccagcgttca ttctcaatgg
     3481 tttatttgtc tgatcacggt ttatcgcacg aggtttcaaa agagaacatt gttatccaca
     3541 atggaaagga tagaagtaaa ttacactacg atattccgct gtttaaaatt tcaagcgatg
     3601 atacccaacg taatgagtat aaagccttta aatccggctt aaacttcact aatggtattg
     3661 cgaattggat tggtatcgaa aatccgttat tagataaaga aattaatctt tttaacgaac
     3721 aaaacgataa aagtgattat gggctaaaga aaatcattga aacgcagtct actgtagaag
     3781 atccagctgt tcctattcct gaaagctact tatataaagc gactaattag caaaagtaag
     3841 taacaaaaaa gcaggcttta agcctgcttt tttagttttt agtatcagaa aaattaagcg
     3901 ttaccgccag tgattttcgc tacttctgct gcgaaatctt cttctacttt ctcaatacct
     3961 tcacctactt ctaaacgaat aaagttagaa actgaagtat ttactgattt taaatattga
     4021 cctacagatt gagatggatc cattacaaac ggctgaccgg ttaatgaaac ttcaccggtg
     4081 aatttagcca tacggccttc aaccattttt tctgcgattt cttttggttt accagaattc
     4141 atcgcaattt caatttgaat ttcacgttct tttgctacta catcagcaga aacatcttct
     4201 gggtttacaa attcaggttt gcttgcagca acgtgcattg ctactttctt aagctcatct
     4261 tcagagcctg cacctgctac taatacacca attttcgcac cgtgtaagta ttgagcaata
     4321 acttcgcctt ctaagtattg aacacggcga atgttcatat tctcaccgat tttcgcaact
     4381 aatgccgcac gtttttcttc aaattgtgct tgtaatgctt cgatagttgt acctttattt
     4441 gcaactgcaa aatcagcaac ttcgttcgct aattctaaga aaccggcatc ttttgcaacg
     4501 aagtcagttt cacagttcat ttcaactaat acgccaaaac ctgaagcgac acgagcaagg
     4561 attacacctt cagctgcaac acgacctgct tttttagccg ctttcgcttg accggattta
     4621 cgcatattat cgattgctaa ttcaatatca ccgttcgctt caactaatgc ttttttacat
     4681 tccatcatac ctgcgccggt acgttcacga agttctttaa ctaatgatgc tgtgatttca
     4741 gccattttaa attcccctta tttgatatgg taaaacaggc tctcacctgc ctagaaattt
     4801 cattgtttag ggcaggttaa aacctgcccc ctcaactgaa ttattccgca gaagcttctt
     4861 ctgctacttc aacagtttca acaccgcgac cttctttgat tgcagcaact gctgaatcta
     4921 agtaaagttg gatagcacgt gttgcatcat cgttaccggg aatgatgtag ttaacgccat
     4981 ctggagttga gttagtatca acaatcgcaa ataccggaat acctaagttg tttgcttctt
     5041 taattgcgat atgttcgtga tcagcaccga taacaaaaat tgcatccggt aaaccgttca
     5101 tatctttgat accgcctaag cttaactcta atttttctaa ctcacgagta cgcattaacg
     5161 cttctttttt agtgattttg tcaaaagtac cgtcttgagt ttgagtttct aaatctttta
     5221 agcgtttgat tgattgacga actgttttcc agttagtcaa cataccacct aaccaacggt
     5281 ggtttacgta gaattgttgg ctctctactg ccgctgcttt aacagcatca cttgctgcac
     5341 gttttgtacc aacaaataat actttaccat tgttactagc aatgcgagtt aattccgcta
     5401 atgcttcgtt gaataaaggt aaagtttttt ctaagttgat tacgtgaaca ccattacgag
     5461 caccaaagat gaatggtttc atttttgggt tccagtaacg tgtttggtga ccatagtgaa
     5521 cgcctgcgtt aagcatatcg cgcatagaaa cttgtgccat aagaattttc cttcaaagtt
     5581 gtttgttttg ccacttatga acggcaaaac ggggtttagc ctccacatat cctagaaaat
     5641 caatctgtta aagacacccc aattcctagc ttgtgatatg tgtgtgtttt agtgttaaaa
     5701 aataaatgtg tacgttttgc ctgaatagac aaaaacgggg cgtattatgc caaaaaacaa
     5761 acaatttgcc aattatttta ttgctctctt cgcattacta aatcaagctc aaaaataaaa
     5821 accgttctca ttattgacta aaaaaatggg gaggtttaga atgtctttca ttctgttatg
     5881 aaaacctgtc tgaaggagac tatcatgaaa aaaacacttt ctgcacttgc tattgctgca
     5941 gccactttta catcaacttc aacgcttgct gcaaatgaag tgaatgttta ttcttaccgc
     6001 cagccttact taattgagcc aatgctaaaa aactttgaaa aagatactgg cattaaagta
     6061 aacatcatct tcgctgataa agggttggtt gatcgtgtaa aacaagaagg tgaattaagt
     6121 cctgctgatg tgcttttaac agtagatatt tcacgcgtaa tggaaattgt taacgctgat
     6181 cttgcacaaa aaattgactc taaagtgtta gaaaaaaata ttcctgcaca attccgtgac
     6241 tctaacgacc aatggtttgg tttaaccaca cgtgctcgtg ttatctacac gtcaaaagat
     6301 cgtgtaggta aattaccagc aggctttgac tacctagatt tagctaaacc agagtataaa
     6361 ggtaaagtct gcgtgcgttc aggcaaaaac tcttacaatg tctcactatt cgcggcgatg
     6421 atcgaacatt acggcattga aaaaaccaaa gcattcttag aaggcttaaa agcgaactta
     6481 gcacgaaaac cacaaggtgg tgaccgtgat caagtaaaag caattaaaga aggcatctgt
     6541 gattactcta tcggtaacag ctactactac ggcaaaatgt tagatgatga gaaacaaaaa
     6601 tcgtgggctg aagcagcgat tattaatttc ccgagtggtg aacacggcac gcacaaaaac
     6661 atcagcggcg tagttattgc aaaacactca ccaaataaag caaacgcggt gaaattaatt
     6721 gaatacctaa gtggcgaaaa agcacaaggt ttatatgctg aacttaacca cgaatatcca
     6781 gtaaaagaag gcatcgagcc atcagcaatc gtaaaaggtt ggggtacgtt caaatcagat
     6841 accatcaaac ttgaagatat cgcaaaaaat tacgaagccg cattaaaatt agttgatgaa
     6901 gtgaaatttg acgatttctc tgagaaaaaa taatcaaccg ataagcggtc atttttccac
     6961 aaaaatttgc aaaattttgt taaaatacaa ccgcttgcaa aaggacgcat tttgcgtcct
     7021 tttatttttt tatgaaataa caggcttaaa gaaaaatgcg atcacaattt tgctggaaaa
     7081 gtattgctgc cctaacaact tttatcgttt tgcttcctct tattgcaatt tgctatcacg
     7141 cattgcaagg ggataatgaa aaccttgctc acctttggca aacaatgttg ccaatctatc
     7201 ttaaaaactc aactttatta gtattaggaa ccgttttcct tgcactgatt tttgctctgc
     7261 ctaccgcttg gattgtggca aattaccgtt tttgggggca aagaacctta caatggttac
     7321 tttgtttgcc tctcgctatg cctgcttatt taattgccta tttatatacc gatttattag
     7381 attactcagg tgcttttcaa ggctggctgc gtagtatttt tggctggact catccgcaag
     7441 attactggtt tcctcaaatt cgtacattgt atggtgcttg ctttgtgctt gcgttagtac
     7501 tatatccata cattttttta ttagtgcgag ttgccttatt agaacaatct gaaaacttaa
     7561 cacacagtgc aaaaatgctc ggggcttcgc cctctcagtt gttccgtcga attacgctgc
     7621 cattaattcg accttctgtt gccgtaggca ttgcattagt ggcaatggaa acgcttggcg
     7681 atttcggtac tgtggcctat tttgccgtgc caacacttac tacggcaatt tatgattcgt
     7741 ggctaggcta tcacgatctt ggtactgcca gccagattgc gatctttatg ttgctaatga
     7801 ttttcctgtt tttaagttta gagcaatata gtcgccgtaa acaaaaaagc tatcaacgtg
     7861 gctatgaaaa gaaatcagcc tttaaatttt taactggttg gaaattagca ttagcccttg
     7921 cttggtgctg gggtttattg gcgttagcct ttttcattcc gtttggcagg ttgctctatt
     7981 gggcatacga ctatttcgag caagcgtgga atttagactt tgtccaattt tcgcttaata
     8041 gtttgaaagt atcgatcatc gcctccgtga taacggtact gattgctcta cttctgcatt
     8101 tttctaaacg tttgaatacc cgcaaaattt tagtcaaaaa tgaccgcttg tcattacaac
     8161 ttgcctcact gggctatgcg gttcctggca cagtattagc gatcggttta ctttcgcctt
     8221 taacatttgc cgatcatcaa ctccatgctt ggctaaaaag ccttgaatta tcacccgttg
     8281 gattgatttt ttcaggctca ctctttgcat tagtattagc ttataccatc cgatttttag
     8341 caatggcaat tggcagcctt gaaacttcgc taaataaaat ctctccatcg ctggatatgg
     8401 cgagccaaac gcttggtaaa aatggctcag caatgttagt aaaaattcat atccctttaa
     8461 tttataaagg tattttaact gcaggattaa tggtctttat tgagagtatg aaagagctaa
     8521 atgcttctct gctacttcgc ccatttaatt ttgatacact cgcaacctat gtgtttacct
     8581 ttacatcaga cgagcagctt gagcgtgctg ctctgcctgc catcgtattg gtgttagtcg
     8641 gtttactgcc tgttatttgg cttaccagat cccttatttc gcaatctgaa aaagaaagat
     8701 aaaggaattt tatgtctgtt ttaactatta atcatctcaa cctcaatttc ggcagtacaa
     8761 aggttttaca aaatctccat cttgctgtga atcaaaatga aattatctgt ttgctaggtg
     8821 caagtggctg tgggaaaact acactgctca aagccattgc aggtttattg ccaattgagc
     8881 agggagatat tcatttagcg ggtgaatgcc taaaaagtaa agccgtggaa gagcgacaaa
     8941 tcgggctgat tttccaagat tacgctcttt ttccacactt gacggtagcc gataatattc
     9001 aatttggctt atccaaattg ccaaaagtac aacaaaaagc aattaccgaa aaaatgcttt
     9061 cagttgtgca tttacaaggc tttgaaagcc gttttccaca cgaactttcg ggcgggcaac
     9121 aacagcgtgt cgctattgcc cgagcattag cctgccagcc agaattgcta ctgttagatg
     9181 agccgttttc caatattgac agccaaactc gctatgcaat gattcaagag atcaagcaaa
     9241 tcttaaaaag ccaaaatgtg cccgctattt ttgtaaccca tagcaaagaa gaagcctttg
     9301 catttgccga taaaattgcc gtgatggatc aagggaaaat tattcaattt ggtaagccaa
     9361 acgagctata ccattctcca gttaatccat ttgtggcaga ttttttaggt ggcacaaact
     9421 atcttaactg taatgtaacg gaagacaacg tgttatgcag ccctattggc gagttccgac
     9481 tcttccctga aatgaacgtt cagaaagggc gttaccgttg gcttcttcgc ccagaacaga
     9541 ttatcttaaa acccaatgag ctaggtttag gtaaagtggt aggcaaactg tttttaggcc
     9601 tatactaccg ctatcaggtt gaaattaaag gcattgagat agtaacttac caatctcaag
     9661 agctgaaaat tggcgaacaa gtggaagtgg gcttccaagt aagagagttt atcctatttt
     9721 aaggagaata tatgaaaatt gaagtttggt cagattatgc ctgcccgttt tgttacatcg
     9781 gcaaacgcca cttagagcaa gccctagccc aatttgaagg cgaggttgaa gtggttttcc
     9841 gagcctttga gcttgatccg cacgctaacg gcgaaccgga gggcgatatt cagcaacgcc
     9901 taatgcggaa atatcaaaaa accgcagaac aagctgatga aatgattcgt tatgtggaac
     9961 aagccggcaa acaagctggg ctagatttgc gttaccgcac cacccaatac actcgcacct
    10021 ttgaagctca tcgcttggcg aaatttgcag aaagtaaaga cttaggcgaa gcaatggttg
    10081 aacgtttatt caaagcctat tttaccgata acactattct agctaaacgc acagagctta
    10141 tcagtttagc cttagacatt ggcttagagc gtgatgaaat cgctcaactg ctcacaggtg
    10201 atgatttcgg gcacgaagtc cgtgaagatg agcgagtcgc tcacaaatat ggcattcaca
    10261 gcgtaccgtt ttttgtgatc aatgaaaaac tcggggtatc cggggctcaa ccgccagaaa
    10321 tattacttga cgctatcaaa caggcattgc aaaaataatc cgaaaaaaga ccgcttgtta
    10381 agctaaacaa gcagtcttat tcttcttata atttacaatt tattttttgg tgatcgcacc
    10441 taaaatacca cgcataattt gtttggtgac ttggttgcgt aaatttctgc caactgaatg
    10501 cgccacttgg ctaaccactt gttcggtaat cgattgatct tttttcttct tcgagccaaa
    10561 aatggaagag agaataccgc caaagaagtc attgtttgct tcttctgccg cagcctgctc
    10621 tgctttaatt gcttctgctt tcgcattaag taattcaaac gcagattcat tatcgacata
    10681 ttggctgtag tgatgataga gatcatcttg cttcactaaa ctatcacgtt cgcctgtggc
    10741 taatggagct aattggcttt ttggtggata gatataggca atttctacag gcgttggcat
    10801 acctttttca tctagcaccg aaaccaacgc ttgccccaca ccaagttgcg tgatggcttc
    10861 taccacattt acctctttat tcgctcggaa agtttccgct gctgatttta ccgctttttg
    10921 atcacgtggc gtgaaagcac gcaaagcgtg ttggatacga ttgccaagct gccctaatac
    10981 tgaatcaggt atgtccaacg gattttgcgt aacaaaataa acacccaccc cttttgagcg
    11041 aattaaacga accacctgtt caattttatc caccaatgcc ttaggggcat cgtcaaacaa
    11101 taaatgagct tcatcaaaga ataaaacaaa cgtcggtttt tctgggtcgc caacttctgg
    11161 caaattctca aagagctctg ccataaacca aagcaggaat gcactgtaca ctcttggtga
    11221 gttaattaat ttttctgcat tcaacatatt gattacacca cgcccattac gggtttggat
    11281 ccaatcgtgc aaatctaatg caggctcacc aaataaatta tctgcccctt cattttcaag
    11341 ccttaataac gcacgctgaa tagctccaac gcttgctgca gaaatatgcc catattccag
    11401 ttggaattct ttcgcattat ctgcgacaaa tttaagcaac gcacgcaaat cttttaaatc
    11461 aattagcaat aaacctctgt catctgccac acgaaaaacg agatttaaca agcctccttg
    11521 ggtatcgttt aaattgagta aacgagaaag taacatcggt cccatttcgg aaatagtgat
    11581 tcgaagtggg atacctgatg taccaaatac gtcccaaaac gaaactggat agccctttaa
    11641 gtaatcttct ccccctaaat taaactgtaa aatgcgttct gcaatttttc ctgaaaaatt
    11701 acccgcttgt accgagcccg aaagatcacc ttttacatct actaaaaata ctggcacgcc
    11761 atcatcactc aaagattctg ccaatttgcg taaagtaacc gttttacctg tacccgtagc
    11821 cccagcaatt aaaccgtgcc gatttgccat tttggcatta agcgaaataa ctttgcctgt
    11881 ttctgttcga gcaatttgat acaaactcat ctttcattct cttaaaggta aattaatttt
    11941 ttgttctcat catataaaaa tttatcactt aattacggct attctttttc gtttttgcca
    12001 agaacgtttt tttacttctt gagcggttca ctttcggtaa agtcagtaag gattccttgt
    12061 cgtattgact cacaggaatc tgatgcccaa tatactcttc aattgcaggc aaattaaccg
    12121 cataacgctc gcaagcaaaa ctaattgaat ggccgctctc ccctgctcgc cccgttctac
    12181 caatacgatg aacgtaatct tctttatcat caggcagatc ataattgaaa acgtgcgtga
    12241 catctggaat atgcaatcca cgagccgcaa catctgttac cactaaaata tccaaattgc
    12301 ctttggtgaa attatccagc aaagaaaggc gttttttctg cggaatatcg ccggttagca
    12361 ttccaacccg atgtccgtct gccgataaat actgccagat ctcttcgcat ttatgcttgg
    12421 tgttggcaaa aatcatacaa cgctccggcc actcttcctc aagcaatgtc agcaacaatg
    12481 ccattttgtc ttcattcgag gggtaaaata gctcttcttt aatacgatgt ccggtttttt
    12541 gtagtggctc aatttcaata tattccgcat tatccatatc ttcataggca agttcccgca
    12601 cttttgccga aagcgttgcc gaaaagagca aagttaaacg ttctgaaggc ttaggtgctt
    12661 ttcgcattaa ataacggata tctttaataa aaccaagatc aaacattcga tctgcttcat
    12721 ctagcacaat cacttgaatt ttgtctaaat tgataatgcc ttgttttaca tagtcaatca
    12781 ctcgacctgt tgtaccgaca agaatatcta cccctttttc aatttcttga acttgtttgt
    12841 cgtaaccatc accaccgtat gccaaagcta gttttaaatc agaatgtttt aaaaacagct
    12901 cggcatctgc cccaatttga accgccaatt cacgggttgg agcaagaatt aatgctctcg
    12961 gctgattttt tgacgtttcg atttcgttat tcaataaatg gttaaaagtt gcaatcaaaa
    13021 aggcaagcgt tttccctgta cctgtttgag cttgccctgc aatatctttg cctttcagcg
    13081 taatcggaaa ggtttttgcc tgaatcggcg tacaaaattc aaagcctttg ctatcaaggg
    13141 catttagtac attagcgtga atcgggaagt caataaagcg gtgttcggta agatgattag
    13201 acatagtatt tccttgataa ttgtgatgtg acaagcggtc ttttttacac atttttttgc
    13261 aaaatagcat attgggcgtt ttttctcaaa tttaaccgct tttgagttta ttcggcaaaa
    13321 tagattggaa aagctctcgg cttttcagcg gttgtgaccc taaatagggc tttagtgcca
    13381 ttcgggtaaa acgtttcgct gcttgttgag tacttttttc tgaaaaatcc aactgagcaa
    13441 acgctaataa atcactgcct aaaaagctct ggttattctg taataatgag gcgataaagc
    13501 cctgattttc ctgaaattga taggtcattt tcggatcaac tggcaaaccg gttgccgcac
    13561 agtgcgtaaa atccacccca taacccaatg cttttaacgt atgaaattca aaggtgcgta
    13621 aaatcggctc aatctgtttt tgtgtggcaa gctcggtaat gcaacgtaaa taatgctgaa
    13681 ataattcagg gtaagcggtc tgattttcca atactcttgc aagtacctcg ttgatataaa
    13741 acccactata aagtgaaagc gtttccatcg gcaacgttaa tgcagccggt tctgctttgg
    13801 ttaaagtttt cagatcccct ttacccgacc aacgcaacaa caacggcgtg aacggctgta
    13861 aaaccgcttt caacggcgag cgagcccgcc ttgcaccttt agcaagtaaa gtaatccgcc
    13921 cgtgatgttc ggtaaaaaac tccactaata aactgttttc gctgtattca cgccgatgaa
    13981 ggacaaaggc tcgttgccat tggtctattg tcataatttc ttgttaatta tgaggttgta
    14041 atttacttct gccaaatctc cccctcccct ctttgctaaa gaggggagat cttgcagagt
    14101 atattttaaa gtcattttca ctatttaacc ttttatatag ataggaagat gaatttaaaa
    14161 tttctggaga actagtcccc ctctttagaa aagaggggtt aggggagatt tgattacgat
    14221 attaatgcta taacgggagc caactactcg tccatatacc ctaaacttct caatgctctt
    14281 tcatcatccg cccaaccagc ttttactttc acccaaagct caaggtgcac ttggttgtca
    14341 aataggcgtt ccatatcttt tcgagcttca atgccgatgg ttttgatttt ttgccccccc
    14401 gcaccaataa ccattttttt ctgaccatct cgttctacta aaatcaagcc attgatttca
    14461 tacaccccac gctcattcat tttaaattgt tcgatttcta ccgttaccga ataaggtaac
    14521 tcttcacctg taaaacgcat tagtttttca cgaataattt ctgatgccat aaagcgttga
    14581 gagcggtctg tcacatactc ttcaggaaag tggtgctcac cttgacgcag tgattgacgg
    14641 acaaatttct gtaaaatatg cacattttta ccccgttgtg ccgaaattgg cagaatttca
    14701 gcaaaatcaa atttttgtga aagctcggta atatgcggca gaagttcttc tttttccttg
    14761 atgttatcaa ttttattgat tgccaataaa acaggggctt ttgccgaacg caatttgttt
    14821 aacaccattt catcatcttc tgtccatttt gtgccttcca caacaaagat gatgagatct
    14881 acatcgccaa tagcagaact tgctgcacgg ttcattaaac gattaatcgc acgtttttct
    14941 tctatgtgta agcctggggt atctacataa atcgcttggt attgatcttc agtgtgaata
    15001 ccaacaatac gatggcgagt cgtttgagct ttgcgtgagg taatggaaat tttttgtcct
    15061 aaaatcttat ttaataatgt tgatttccct acatttgggc gaccaacaat cgcaataaaa
    15121 ccacaatagg tttttgcagg agtttgaatt tgttctgtca ttttgttttc ctttcattct
    15181 gtggaatgaa tttgatggtg caagcgtcca cgcttgtacc atttaattaa atctttagca
    15241 caagcgagga cgcttgcgct atcttacttt ttcgttttaa ccaccgctaa cgctttttct
    15301 gcggcatttt gttcggcttt tcggcggctg gtgccaatgc cgataaacac ttcctcgacg
    15361 ttaatcactt tacaggttac acggaaagtt tggttatgag cttcgccttt aatatctaat
    15421 acatcatatt caggcaatgg caattttcta ccttgtaaaa actcttgcag gcgggttttt
    15481 ggatcttttt gtgaatcgcc tggactgata tctttaagca aatctgaata ccaatcttcc
    15541 accttttcca ttgcttttgc catatcttga tcgagataaa tggccgcaat aatcgcttca
    15601 acacagtccg ataaaatcga ttctcggcga aaaccaccac tttttagctc tcctggacct
    15661 aattttaggt agtcgcctaa atcaaatttg cgagcaataa tcgctagagt ttgctcacgc
    15721 acaagagttg ctctcatacg gctaagctca ccttcattcg cttttggaaa tttgtcgtat
    15781 aatactttac caatagtaaa atttaaaatt gaatcgccta gaaattcaag acgctcattg
    15841 tttttggttg ccgcactgcg gtgtgttaag gcctgaatga ggtaatcaag gttatgaaat
    15901 tgataaccta attttttctg taatcgttct agttgcatag tttatgtgaa taaaggggcg
    15961 tatctcatac gcccctgtta agattaattg attgaggtaa acattctaga aaaacgaagc
    16021 cccgttggga attcatttgc ttttttatct aaacttaacc aaataaaagt ggctttacca
    16081 acgatgtttc tctcaggcac aaagccccag aaacgactgt cttcactgtt atcacggtta
    16141 tcacccatca caaaatagta tccttgtggc acaacccatt caccttctgc ttgcccttct
    16201 tgttggtaga aataaggtgc atagttaaat gccattgggt gatttaaaat ttgatgagtt
    16261 acattacctt tttcagtgcg ttctacctgc atttcaccgt gatagaaaaa ctcaggattt
    16321 ggcttgcctt cgctgtattc aaataccttt gtttcgccat tggctttagt aaccgttaat
    16381 tgctgagttg caaaatcata tttaatttta tcaccaccta ctgccaccac acgcttaata
    16441 taatcaacgt gtggttgtgc cggtgctttg aatacaatca catcgcctcg ttctggtttg
    16501 cccgtttcaa tcaaggtgtt ttgccagata ggctctttaa tgccgtagct gaatttattt
    16561 acgactaaaa aatcgcctac acgcaaggtt ggctccattg aaccacttgg aatttgaaac
    16621 ggttcaaata agaacgagcg aagtactgta acaaagaata aaatgccgaa aagtgaggca
    16681 aaaaattcgc ctactgcgga tttaggttga atttccgcta tttcttcagc ggttaattct
    16741 ctgcctaaac gtttttgttg tagaacaatc gcctgtttac gtcttgggtc agcactgaat
    16801 ttgtaaaacg cccaaaatcc accacaaata ataaccaagg caactaaaat aatggaaata
    16861 gtatttggca gttgcattga atcaagccat tgccaaatac cataaataat acctagaaaa
    16921 ataattggca taaattgtgc cactgaatgc tcctttttat tcaaaattgc aaagttttct
    16981 caaaatatga ccgcttgcaa gcggtcgtat tttacacgaa tattgacaat taatccttac
    17041 ccacatgaag aattgccaaa aatgcttctt gtggcacttc tacgttaccg agagatttca
    17101 ttcgtttttt accctctttt tgtttttgta gcagtttctt cttacgactt acatcaccac
    17161 cgtaacattt tgctaatacg tttttacgca actgttttac cgttgagcga gcaatgacgt
    17221 ggttaccaat tgccgcttga atagcgatgt caaattgttg gcgtggaata agttcacgca
    17281 ttttttccac taattcacgt ccacgatacg ccgcatttgc acggtgaacg ataatcgcca
    17341 acgcatcaac acgctcgccg ttaatcataa tatccacacg caccatatca gccgtttgga
    17401 aacgtttaaa accgtaatcg agtgaagcat aaccacgaga ggttgatttt aagcggtcga
    17461 agaagtctaa cactacttcg cccattggga tttcgtaagt taaggcgatt tggttaccgt
    17521 gatagaccat attggtctgt acgccacgtt tttccacaca aagggtaatc acgttgccta
    17581 ggaattcttg tggcacaagc atattacatt ctgcaatcgg ctcacgaatt tctgcaatat
    17641 tgttgattgc tgggagtttc gatgggctat ccacatagat cgtttcgcca ctggtttgca
    17701 ccacttcgta aactacggtc ggagcggtag taatcaaatc aagatcgtat tcacgctcta
    17761 aacgctcttg aatgatctcc atatgcaaca agcctaagaa gccacaccgg aagccaaagc
    17821 ccaacgcact tgaagtttct ggctcataga acaatgacgc atcatttagg cttaatttgc
    17881 ctaaagcatc acggaaggct tcgtagtcgt ctgaactaat cggaaataac cctgcataaa
    17941 cctgtggttt tactttctta aagcccggta atacttcagt tgctgggttg tggtggtggg
    18001 ttaatgtatc gcccactggt gcccctaaaa tatctttaat cgcacaaact acccaaccta
    18061 cttcacctgt ttttagctcg gtagtatcca cttgttttgg cgtgaaaata ccaaggcgat
    18121 ctacattgta agactgccct gtactcatca ctttaatttt atcgcctttt ttcagcacgc
    18181 catttttcac acgcactaaa gacacaacgc ctaaatagtt atcgaaccaa gagtcgataa
    18241 ttaacgcttg taatggtgct tccgcatcgc cttctggtgc aggcattttc ttcacgattt
    18301 cttctaaaac atcttcaatg cctaaacctg ttttagctga acagcgtact gcatcaatgg
    18361 catcaatgcc gacaatatct tcaatctctt ctgccacacg ctcaggctcg gctgctggta
    18421 aatcgatttt atttaaaatt ggcacaacct ctaaatctat ctcaattgcg gtataacaat
    18481 tcgccaacgt ctgtgcttcc accccctgcc ctgcatcaac cactaataaa gcaccttcac
    18541 aagcagcaag cgagcgagaa acttcatatg agaaatccac gtgccctggc gtatcaataa
    18601 agttgagctg ataaatttcg ccatctttcg ctttatagtt taaggttaca ctttgtgctt
    18661 taatagtaat tccacgctca cgctcaagat ccattgaatc taatacttga gcctccattt
    18721 cacgatctga taagccacca caagtttgaa ttaagcggtc tgataaagtc gatttgccgt
    18781 gatcgatatg agcgataatc gaaaagttac gaatattttg cattttcatc gggcagttaa
    18841 tgtcctgttt tgttatttgt ttatcaaaaa ttaatcgggg aattgtactt gaaatacaag
    18901 gttttgcaaa gaaaacaaat agcaataagc ggttattttt tcctaaaaat gtgcaaattt
    18961 cttgagaaaa atgaccgctt gcactcaccc taattgcaaa taatttctct aaaatataaa
    19021 a
//
LOCUS       DANLXD010000048        18900 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.048, whole genome shotgun sequence.
ACCESSION   DANLXD010000048 DANLXD010000000
VERSION     DANLXD010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18900)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18900)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18900
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.048"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            63..953
                     /locus_tag="PXD18_001362"
     CDS             63..953
                     /locus_tag="PXD18_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6301798.1"
                     /translation="MDKLNAISLFCKVIETQSFTQAAQQAQISLPMASKLVAQLEEHL
                     NVRLLQRTTRKITPTEAGLLYYQQCLPILNELKEADASVSNINSTLQGKITMSVPMDF
                     GSRFIAPYLGKFMEDYPNLALHIEFSDRRVDVIAEGFDLVLRIGSLADSSIVAKKIAD
                     SHLVLVASPDYLARFGEPKGLEALVERDCLLYEYHPQWQFSQQGQKMQIKPQGKIYSN
                     NGYALVQMAKAGLGIINIPKFLIKHELKNGELIPIMPFLTQEPLQISLLYPNRRYLSP
                     KVRILIDFFTQLMQEQKEYI"
     gene            complement(1003..1263)
                     /locus_tag="PXD18_001363"
     CDS             complement(1003..1263)
                     /locus_tag="PXD18_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005718542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HDL6301799.1"
                     /translation="MGWIAAIIVGAIIGWIASAVMKSEGGLCKNIIIGILGSSLGRWV
                     FGDVLGIGSAYSAGDFNIVGIFFGVLGAALLIFILRKLSIIN"
     gene            complement(1343..2302)
                     /locus_tag="PXD18_001364"
     CDS             complement(1343..2302)
                     /locus_tag="PXD18_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6301800.1"
                     /translation="MKFHKTLLVTLLSSLSVAALAQDKIQNVAITAIVEHPALDSIRK
                     GVIEELAREGFVDGKNIKIDYQSAQGSTATAAQIARKFVGDKADIIIPITTPSAQPVV
                     AATRSIPIVFSGVTDPVAAKLVKSWEPSGTNVTGISDHKAMAPQVKLIQTLVPDLKAV
                     GYVYSAGEVNSAIVLEELKQEAQKQGFTIVPVAVQRSADIGTAARSLNGKVQAIYISE
                     DNAVVSAYEALHKAALEAKIPVIAADRDTVQRGAVAAYAVNQYDIGVATGKVAARVLK
                     GEKAGTIPIQEVSKLELSINTKTAKELGITIPEVLIKEAKQTF"
     gene            complement(2499..2906)
                     /locus_tag="PXD18_001365"
     CDS             complement(2499..2906)
                     /locus_tag="PXD18_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HDL6301801.1"
                     /translation="MKPLRPYLYNAYYNWIIDSDNTPYLLVNAEFPDVDVPVEFVKEG
                     KIILNISPRSIGQYIVADEYISFSARFQGMLRDIYIPFGAMVAIYAQETGDGIMFQEE
                     AYYTEEAYQARVRAVEQPKKIKAKKTSTLKLVK"
     gene            complement(2906..3550)
                     /gene="sspA"
                     /locus_tag="PXD18_001366"
     CDS             complement(2906..3550)
                     /gene="sspA"
                     /locus_tag="PXD18_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stringent starvation protein A"
                     /protein_id="HDL6301802.1"
                     /translation="MTSSINKRSVMTLFSDKNDIYSHQVRIVLAEKGVPYEIENVMLG
                     SISEDLLELNPYGNIPTLVDRELVLFNPRIIMEYLDERFPHPPLMPVYPVSRGQCRLN
                     MYRIEQDWYSQIDIVNKDPESAEGKKALAQLKEDVLALAPIFAAKPYFMSDDFSLVDC
                     YIAPLLWRMQILGVKFSGATAKPINAYMTRVFQRDSFIQSVGGEAPKHLMDDKD"
     gene            3724..4221
                     /gene="purE"
                     /locus_tag="PXD18_001367"
     CDS             3724..4221
                     /gene="purE"
                     /locus_tag="PXD18_001367"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HDL6301803.1"
                     /translation="MPNKAEIAIVMGSKSDWSTMSEATQILDQFGLSYHVEVVSAHRT
                     PDKLFSFAETAETNGYKVIIAGAGGAAHLPGMIAAKTIVPVLGVPVKSSMLSGVDSLY
                     SIVQMPKGIPVGTLAIGPAGAANAGLLAAQILAAFNPDIAEKLRIFRQTQTQMVLDNP
                     DPRVE"
     gene            4236..5201
                     /locus_tag="PXD18_001368"
     CDS             4236..5201
                     /locus_tag="PXD18_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HDL6301804.1"
                     /translation="MSKKLLILHTGGTISMKEGEDGKVSPSNENPLLAALERLNHPAK
                     LAQESLFNIPSPHINIEHWQQLKMRIEKAVNEENVDGVVITHGTDTLEETSYFLDLAL
                     SVNIPVVITGAMRSSNELGADGLINLQSAILVALNEESRDKGVLVVMNDEIHNAKFVT
                     KTHTTNVATFQTPTFGPCGLVTKESVIFFQKLTTYERYPIQQVTKANVQLLKAYAGMD
                     SFLLEQLAKSKCDGVVIEALGAGNLPPSCLAGIEALVNANIPIVIVSRAFNGITQDVY
                     DYVGGGKQLKQKGIIFTKGLSGQKARIKLMVLLSQTLDKPLSDYF"
     gene            5220..6308
                     /gene="purK"
                     /locus_tag="PXD18_001369"
     CDS             5220..6308
                     /gene="purK"
                     /locus_tag="PXD18_001369"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HDL6301805.1"
                     /translation="MQKSAIYPPVYVLGNGQLGRMLRYAGAPLDIEVKPLAFDAPVFD
                     IEPNSIITAEIERWADTPLTQLLGNHPNFVNLNVFGKLADRFTQKSLLDELHLATSKW
                     QLLENAEHWQDIFQHIGEKVVVKRRTGGYDGRGQWIVTQDSIHQITPELFGEVIAEKF
                     IPFEGEISIVGARFRDGSTRFYPISHNLQQNGILRYSVSDVNLPNQALYQQQAEQMLA
                     TVMQKLEYVGVMAMECFVVGDKLLINELAPRVHNSGHWTQLGCAISQFELHLRALLDL
                     PTPALDQIAPSVMVNLIGIEHNKQWLSLPFSQLHWYGKEVRAGRKVGHINLTHTDKNG
                     LIELLEQLRPSLTEDFHSGLDWAINKLK"
     gene            complement(6529..6939)
                     /locus_tag="PXD18_001370"
     CDS             complement(6529..6939)
                     /locus_tag="PXD18_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301806.1"
                     /translation="MISRSLFSKLILFAKIVIFSQLVFMVVIWIAHHIMREYSNPFER
                     FGTLFNNVFLTFIIPMMVSSAVIVYKGYTQKNEDKVFWIYMGFFLIWILGFIYFEPAV
                     YDKSLKISGAGFGAMLSIIICSKLLPKETNKEQL"
     gene            complement(6942..8960)
                     /gene="uvrB"
                     /locus_tag="PXD18_001371"
     CDS             complement(6942..8960)
                     /gene="uvrB"
                     /locus_tag="PXD18_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HDL6301807.1"
                     /translation="MSKQGKPFILHSPFKPSGDQPSAIAKLTEGLNDGLAHQTLLGVT
                     GSGKTFTIANVIAKLNRPAMVLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPE
                     AYVPASDTFIEKDASINEQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDVDAYMQM
                     MLHLQVGAMIGQREILSRLAELQYTRNDQAFQRSTFRVRGDVIDIYPAESDEVALRVE
                     LFDDEIENLSLFDPLTGHSLGKVPRYTIYPKTHYVTPRERILEAIEQIKVELADRRTY
                     FIKENKLLEEQRIAQRTQFDIEMMNELGYCSGIENYSRYLSGRKEGEAPPTLFDYMPA
                     DGILVIDESHVTVPQIGGMYRGDRARKETLVQYGFRLPSALDNRPLRFEEFERLSPQT
                     IYVSATPGAYELEKNPDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIHKRVAVDER
                     VLVTTLTKKMAEDLTDYLDEHGVRVRYLHSDIDTVERVEIIHDLRMGMFDVLVGINLL
                     REGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGKAILYGDRITNSMQKA
                     ITETERRREKQMKYNEEHGITPQALNKKVGELLDIGQSDKPKRGKQAVKKAENSATDY
                     KPKSRKELEKELKTLEQQMRDFAKDLEFEKAAAVRDKLQHLKAYLLEV"
     gene            complement(9199..9435)
                     /locus_tag="PXD18_001372"
     CDS             complement(9199..9435)
                     /locus_tag="PXD18_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HDL6301808.1"
                     /translation="MSRTTSVTLAEPLSQFVNQMVESGRYGSTNEVISAALKILEAQE
                     QQLIQLRALIDEGLESGVSEETVQSIISKAKRNV"
     gene            9598..10443
                     /locus_tag="PXD18_001373"
     CDS             9598..10443
                     /locus_tag="PXD18_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005823485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EfeM/EfeO family lipoprotein"
                     /protein_id="HDL6301809.1"
                     /translation="MFLLKGNFYAFNQTCFCTFALSGFFVATQAAALDLTKETEAYKQ
                     FVVEQIDQLVTDTEKFVGYLNKGDVQKAKKIYPLARMYFERSEPIAESFGDLDPRIDA
                     RLADLAEEGKTEKDWSGFHKIEKVLWQKNTTKGTKATAEQLLKDVKELRAKIPTAEVT
                     PEPMITGAVDLLNEVSTTKVTGEEEIFSKTDLYDFKANIEGAEKIYEIFKTQLEQIDA
                     KLSTEIGSRFAAVNALLAKHNKSKTGYDYVPYNKLSKADIKALAEAVNQLGEPLAQLG
                     VLLNK"
     gene            10454..11650
                     /gene="efeB"
                     /locus_tag="PXD18_001374"
     CDS             10454..11650
                     /gene="efeB"
                     /locus_tag="PXD18_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HDL6301810.1"
                     /translation="MMAETTSRRDFLKHTALVGAGLLSAPAFALESRQISEKSQNQYD
                     FYGKHQAGIVSPAQKHIYFLVLDLDTTDIAKVKTLFQNWTEYSRNLTLGKNVKPYSAN
                     AYVPPADTGEADSLSAQNLTLTFGVSANFFTKLGIEKHKPKELNDLPHFPRDQLQAEY
                     TGGDICIQACADDPQVAFHAVRNLVRVARGEIKMKWSQMGFNSFANQDTPRNLFGFKD
                     GTANAESLKDQENTVWVQQEGWLKGGSYLAVRRVKMFLETWDRTHLQSQEETFGRHRD
                     SGAGIGHQHEFDKLDLAKKDEKGNAVIPEVSHAHLANKTGLKILRRSFSYSSGIDDKG
                     QFDSGLLFVSFQQSPEQFIKIQNALGNVDKMNEYITHIGSGLFACFAGVKDENDYLGK
                     ALFDLI"
     gene            11661..12280
                     /locus_tag="PXD18_001375"
                     /pseudo
     CDS             11661..12280
                     /locus_tag="PXD18_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596976.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+/Pb2+ permease"
     gene            complement(12316..13134)
                     /locus_tag="PXD18_001376"
     CDS             complement(12316..13134)
                     /locus_tag="PXD18_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HDL6301811.1"
                     /translation="MKYDLHAHSTASDGVLSPTELVQRAVEQGVTMLALTDHDTISGI
                     QEAKNFAQNQPLELISGVEISILWQEKSIHLAALNIDENNEELVKFLDNQAQLREERA
                     VEIGEKLAKVGIANAYEGAKALATGEVTRAHYGRFLYEQGYVRNIEHAFKRYLGMGKP
                     AYVKPRWSSLEDAVNVTHTSGGVISIAHPLRYKMTARWIRRLIADFKQAGGDGIEVSG
                     CGQTPDQRQLLARWAKEFDLYGSVGSDFHYPTGWIELGKSLELPQECKPIWTLF"
     gene            complement(13146..13745)
                     /locus_tag="PXD18_001377"
     CDS             complement(13146..13745)
                     /locus_tag="PXD18_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA glycosylase"
                     /protein_id="HDL6301812.1"
                     /translation="MTMDNLPLEQHPFDPILPEQATVVMVGTFPPTSEKRCMEFHYPN
                     FQNDMWRIMGNIFYADPNYFRVGEEKRFDPIRIEAFLREKGVALCSSAKTAIRLKGNA
                     SDKDLKIVDPIDMDELLLKLPKLKWLFTTGGLATDTLLGLLPEKHKAPKTNEWVVYPY
                     SATRELYLYRLPSTSRAYPLSLANKTEAYRQFFRTAGLI"
     gene            complement(13742..15289)
                     /gene="sbcB"
                     /locus_tag="PXD18_001378"
     CDS             complement(13742..15289)
                     /gene="sbcB"
                     /locus_tag="PXD18_001378"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease I"
                     /protein_id="HDL6301813.1"
                     /translation="MSDKFSFFFYDYESFGVSPALDRPAQFAGIRTDADFNIIGEPVM
                     FFCKQTPDYLPSPEAVMVTGITPQQCNAEGVSEPEFAARIHAEFSRANTCTIGYNNIR
                     YDDEMTRYTFFRNFYDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPTDETGMPSF
                     KLENLTKANGIAHENAHDAMSDVYATIAMAKLIKQKQPKLFDFFFNLRSKKEVEKLID
                     TGEMTPLVHVSGMLGNYRGNTAWVVPLAWHSTNQNAVIVCDLSGDMNGLLTENAEVLR
                     QRLYTKRDELAENELPVPLKLVHINKCPILAPAKTLLPENAERLGIDRALCLENLKTL
                     KAQKSLIREKVIEIFNEERTFEPSTNVETTLYDGFFSPADKNNMAILRTLPPEDLANH
                     GLKFEDPRVEALLFHYRARHYPQTLSRAEQIKWQKHCNQQIEAKAAQFAQSIDDLFQQ
                     HHDNPEKVKLLENLTAYAEQISQQQAVIYRQNVAKDEKLLSELNRVAEQPLDKTEKLK
                     MLKELIK"
     gene            15690..17093
                     /gene="asnS"
                     /locus_tag="PXD18_001379"
     CDS             15690..17093
                     /gene="asnS"
                     /locus_tag="PXD18_001379"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012054399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HDL6301814.1"
                     /translation="MSKFPTVSEILSGKIAVGEEATVRGWVRTRRDSKAGLSFLSVYD
                     GSCFDPIQAIINNDLPNYNAEVLHLTAGCSVVVTGKVVESPAEGQAVELQASKVEVLG
                     WVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYW
                     VATPVITASDTEGAGEMFRVSTLDLENLPRGENGKVDFNQDFFGKESFLTVSGQLNAE
                     TYACALSKVYTFGPTFRAENSNTTRHLAEFWMMEPEVAFADLNDNAKLAEDMLKYVFK
                     AVLAERKDDMEFFVKHVDKEAISRLENFINSPFAQVDYTDAIEILLKSGKEFEFPVSW
                     GIDLSSEHERFLAEEHFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEII
                     GGSQREERLEVLDQRMNEMGLNPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQ
                     NIRDVIPFPRAPRNANF"
     gene            complement(17193..18185)
                     /gene="epmB"
                     /locus_tag="PXD18_001380"
     CDS             complement(17193..18185)
                     /gene="epmB"
                     /locus_tag="PXD18_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HDL6301815.1"
                     /translation="MQPIQIKPLWLTELAQAFNNPIDLLQFLELNPNDFEGDIAARKL
                     FALRVPRMFAEKMEKGNPNDPLFLQAMSLQAEFIEAEGFVVDPLEEQQSPAPNILHKY
                     HNRLLFMLKNSCAINCRYCFRRHFPYEEVKSGKAVWQQGLTYIAEHPELEEVILSGGD
                     PLMAKDQDLDWILTQLEQISHIKTLRIHSRLPVVIPNRITTELCERLSKSRLNVVLVT
                     HINHANEIDAVFANKMAQLKKAGVVLLNQSVMLKGVNDNAQTLKRLSDKLFEYGILPY
                     YLHLFDKVAGASHFYIEDEQAGEIYRELQRITSGYLVPKLAREIAKEPNKILKG"
     gene            complement(18239..18808)
                     /locus_tag="PXD18_001381"
     CDS             complement(18239..18808)
                     /locus_tag="PXD18_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301816.1"
                     /translation="MKKLITLSAILAVSVATVAEAKRGGGSFRSVSPSKAVATKPVAS
                     QKSTTNQQTQQKDATFANTPNSATAQPQVRQGSTMANVAMGAAAGYILGDMMSSNAHA
                     NQPSQPADANAQAVNSAQNVANGAVPAIAEFKSIGGQIDPFLVEKTDGYRRYCISGVQ
                     YLVAAQGVQTSPTVMVNPNGTPLQCNLIP"
BASE COUNT         5604 a         4060 c         3772 g         5464 t
ORIGIN      
        1 tttagacact atttttacga tagcaagcct taacacaaat tacaatataa agaagagaga
       61 aaatggataa actaaacgca atcagtttat tttgtaaagt aattgaaacc caaagtttca
      121 ctcaagcagc acaacaagct caaatttcgt tacccatggc aagtaaattg gtggctcagt
      181 tagaagaaca tctcaatgtg cgtttactac aacgaaccac tcgaaaaatt acgccaactg
      241 aggcagggtt gctctactat cagcaatgct tgcctatttt aaatgaacta aaagaggccg
      301 atgccagcgt aagtaatatt aactcaacgc tacaagggaa aataacaatg tctgtaccaa
      361 tggattttgg ctctcgcttc attgcccctt accttgggaa atttatggaa gattacccta
      421 atttagccct tcatattgaa tttagtgacc gtcgggtaga tgtgattgca gaaggctttg
      481 atttggtgct gcgtattggt agccttgcag atagttccat tgtagcgaaa aaaattgcag
      541 attcccattt ggttttagtt gcttctccag attatttagc tcgatttggc gaacctaaag
      601 gcttagaagc attagtggaa cgagactgcc tactctatga ataccatcct caatggcaat
      661 tttctcaaca aggacaaaaa atgcaaatta aaccacaagg taaaatttac agtaacaatg
      721 gttatgcgtt agtacaaatg gcaaaagctg gtttgggcat cattaacatt ccaaagtttt
      781 taataaaaca cgagctaaaa aacggagagt tgattcctat tatgcctttt ttgacacagg
      841 aacctttaca aatcagctta ctctatccaa accgtcgtta tctctctcct aaagtgcgaa
      901 tcctaattga ttttttcaca caactgatgc aagagcaaaa agagtatatt taacaaaaaa
      961 gaagcagtta taaaacaact gcttcctttc tgaaatacga aattagttaa ttatgcttaa
     1021 ttttctcaaa atgaaaatca aaagagctgc ccctaataca ccaaaaaaga taccgactat
     1081 attaaagtct ccggcactat aagcggaacc aatacctaat acatcaccaa atacccagcg
     1141 tccaagtgac gaacccaaaa taccaataat aatatttttg caaagtccgc cttcactttt
     1201 cattacagcc gaagctatcc aaccaattat agcgccaaca ataattgcag caatccatcc
     1261 cataatattc tccttagctg agttgaaatg aatttttact ctacaagatt atgacaaata
     1321 aaacaaattt ttatttttta cactaaaaag tttgtttagc ttctttgatt aatacctctg
     1381 gtatagtaat gcccaattct tttgccgttt tagtattaat tgaaagctct aatttgctga
     1441 cttcttggat tggaattgta cctgcttttt ccccttttaa tacacgagca gcaactttac
     1501 cggttgccac accaatatca tattgattaa ccgcataagc tgccactgca ccacgttgta
     1561 ctgtatcacg gtcagcagca atcaccggaa tttttgcttc taaagccgct ttatgtaagg
     1621 cttcataagc cgaaacaact gcattatctt cagaaatata aatagcctgc acttttccgt
     1681 ttaggctgcg agcagcagtg ccaatatcgg cactgcgttg aacagcaacc ggcactatag
     1741 taaagccctg tttttgagcc tcttgtttta actcttctaa cacaatcgca gaattaactt
     1801 cacctgcact atacacataa ccaacagctt tcaaatccgg tactaatgtt tgaattaatt
     1861 tcacttgtgg agccatcgct ttgtggtctg aaatccccgt cacgttagtg ccacttggct
     1921 cccacgattt tactaatttt gcagcaaccg ggtctgtcac gcctgaaaac acaattggga
     1981 tagaacgtgt tgcagcaaca acaggttgtg ccgaaggtgt ggtgatcggg ataataatat
     2041 ctgctttatc cccaacaaat ttacgcgcaa tttgtgctgc tgttgcagta ctaccctgtg
     2101 cagactgata gtcgatttta atgtttttac catcaacaaa cccttctcgg gctaattctt
     2161 caatcacacc tttacgaatt gaatctaatg cagggtgttc cacaatcgct gtaattgcta
     2221 cattttgaat tttatcttga gctaatgccg ctacagaaag tgaacttaac aaagtcacta
     2281 ataaggtttt atggaatttc attttctctc cttaagatca ttactgtact atcacaacag
     2341 tacaaacaca aaacaaagat aagcaatttt tagtcggagt gcaagtggaa tttgattatt
     2401 tccgtcacaa aacaaacaag cggttaaatt ttgactgata tttgcaaata atcagaaaaa
     2461 tttaaccgct tgtaatgtgt tttgatgaaa tagatctctt atttcaccaa ctttaaggta
     2521 gatgttttct tcgccttgat ttttttaggc tgctctactg ctctaactcg agcttgataa
     2581 gcctcttcag tgtagtaggc ttcttcttgg aacataatac catcaccggt ttcttgcgca
     2641 taaatcgcca ccattgcccc aaaaggaata taaatatctc ttaacattcc ctgaaaacga
     2701 gcgctaaagc taatgtattc atcagccaca atatactgcc cgatggaacg aggcgaaata
     2761 tttaaaataa tcttcccttc tttgacaaac tctaccggca catctacgtc tggaaattct
     2821 gcattcacta ataagtaagg cgtgttatcg ctatcaataa tccagttata gtaggcatta
     2881 taaagataag gtcttaatgg tttcattagt ctttatcgtc cattaaatgt tttggcgctt
     2941 cgccgccaac agactggata aaactatcac gttggaatac acgggtcata tacgcattaa
     3001 ttggttttgc cgttgcaccg ctgaatttaa cgcctaagat ttgcatacgc cataataacg
     3061 gtgcaatata gcaatcaacc aagctgaaat catcgctcat aaaataaggt ttagcggcaa
     3121 aaataggcgc taatgccaat acatcttctt taagctgtgc taacgctttc ttgccttccg
     3181 ctgattcagg atctttattc acaatatcaa tttgcgaata ccaatcttgt tcaatacgat
     3241 acatatttaa acggcactga ccacgagaaa cagggtaaac cggcattaat ggtgggtgag
     3301 ggaaacgctc atctaaatat tccataataa tacgagggtt aaacagcact aattcacgat
     3361 caaccaatgt aggaatatta ccgtaaggat tcaattctaa taaatcttca gaaatactgc
     3421 ctagcataac gttctctatt tcataaggca cccctttttc tgctaacaca atacgcactt
     3481 ggtggctgta aatatcattt ttatccgaaa aaagagtcat taccgaacgt ttgtttatac
     3541 tactcgtcat ttatatctcc gatgattaaa tttataaaaa ataaaatggt tgtcgattat
     3601 atcatatttt aaccagcaga taacagccct aaaaattgct tttcacttct taaatagcta
     3661 cgcaaacgtt tgctttgtat gctatgatta cactgtttta cattagtatc ataaggattt
     3721 aaaatgccaa ataaagctga aattgcgatc gtaatgggat ctaagagtga ttggtctaca
     3781 atgtctgaag caacccaaat attagaccag ttcggtttga gctatcacgt tgaagtcgtc
     3841 tcagcacacc gcacaccgga caaactcttt tcttttgctg aaactgcaga gactaacggc
     3901 tataaagtga ttattgccgg agccggcggt gcagctcact tgcccggaat gatcgctgct
     3961 aaaaccattg tgccggtgtt aggtgtgccg gtaaaaagct caatgttaag tggtgtagat
     4021 agcctctatt cgattgtgca aatgccgaaa ggtattccgg tcggtacgct cgcaatcggg
     4081 ccggcaggtg cagcaaatgc aggcttatta gccgctcaaa ttttagcagc ctttaaccct
     4141 gatattgcag agaaactgcg tattttccgt caaacccaaa ctcagatggt attagataat
     4201 cctgatcctc gtgttgaata actattgtat aaaagatgtc taaaaaatta ttaatcctcc
     4261 acactggtgg tactatttca atgaaagaag gggaagacgg taaggtctcc ccttccaatg
     4321 aaaatcctct cttggctgcc ttagaacgtt taaaccaccc agcaaaattg gcgcaagaat
     4381 cgttatttaa tattccctct ccgcatatca atatcgagca ttggcaacag ttaaaaatgc
     4441 ggattgaaaa ggcagtgaat gaggagaatg tcgatggcgt agtaatcacc cacggcacag
     4501 ataccttgga agaaacctcc tattttctgg atttagccct cagcgtaaat ataccggtag
     4561 taattaccgg agcaatgcgt tccagtaacg aactgggtgc tgatggctta atcaatctac
     4621 aaagtgcgat tttagtggcg ttaaatgaag aaagccgaga taaaggcgtg ttagtggtga
     4681 tgaatgatga aatccacaat gctaaatttg tgaccaaaac ccacaccact aatgtggcga
     4741 ctttccaaac cccaaccttt gggccttgtg gcttagtaac gaaagaatct gtcatttttt
     4801 tccaaaaatt gaccacttac gaacgttatc caattcaaca agtaactaaa gctaacgtgc
     4861 aactactgaa agcatacgcc ggaatggata gttttctgct ggaacaatta gcgaaaagca
     4921 aatgcgatgg tgttgtgatt gaggcattgg gtgcaggtaa tttaccccct agttgtctgg
     4981 ctggtattga ggctttagtg aatgccaata ttccaattgt aattgtttct cgggcattca
     5041 atggtattac ccaagatgtc tatgattatg taggcggtgg aaaacagtta aagcaaaaag
     5101 gcattatttt taccaaaggc ttaagtgggc aaaaagctcg cattaaactt atggtcttac
     5161 tcagccaaac cttagacaaa ccactatcag actatttcta acccattgag aataccacga
     5221 tgcaaaaaag tgcaatctac ccacctgtgt atgtattagg caacggccag ctcgggagaa
     5281 tgctacgcta cgccggagca ccacttgata ttgaagtcaa accgctggct ttcgatgccc
     5341 ctgtgtttga tattgagcca aacagcatta ttaccgcaga aatcgaacgt tgggcagata
     5401 cgcctttaac gcaattactc ggtaaccacc cgaattttgt gaacctgaat gtttttggga
     5461 agttagccga tcgttttacg caaaaatcac tacttgatga actccatctt gcgacttcaa
     5521 aatggcaact gctagaaaat gccgaacatt ggcaagatat ttttcagcat attggcgaaa
     5581 aagtagtggt taaacgccga accggaggat atgacggacg tgggcaatgg attgtaacgc
     5641 aagactcgat tcatcaaatt acacctgaat tatttggcga agtgattgcc gaaaaattta
     5701 tcccgtttga gggggaaatt tccattgttg gggcgagatt ccgtgacggc tcaacccgtt
     5761 tctaccctat ttctcacaat ttacaacaaa acggcattct acgttactcc gtctccgatg
     5821 tgaatttacc gaaccaagcc ctctaccagc agcaagccga acagatgctc gctacggtaa
     5881 tgcaaaaatt agagtatgtc ggcgtaatgg caatggaatg ctttgttgtg ggcgacaagc
     5941 tactcatcaa cgagcttgcc cctcgagtgc ataacagcgg acactggaca caactcggct
     6001 gtgccattag ccaatttgag ttacatttac gggcattatt agatctacct acgccagcac
     6061 tcgaccaaat tgccccaagc gtgatggtta atttaatagg cattgaacat aacaagcagt
     6121 ggctaagcct cccatttagc caactacatt ggtatggcaa agaagtccga gctggtagaa
     6181 aagttgggca tatcaacctc actcacaccg ataaaaacgg cttaattgaa ctactggaac
     6241 aactcagacc gagcctaacg gaagatttcc attcgggatt agattgggca atcaataagc
     6301 tcaagtaagc ggtcggattt tgtaactttt ttgcaaatct gtttacccga tggtgcgagc
     6361 ttcctcgctc gtaccaaaca agcggtcgac ttagtgctaa aatttgcaaa ataattcaac
     6421 ataatggcta cttccggtca tcatcttgat ctgaaaaccc ctcagggtgg atatggctat
     6481 caaaaagcat tttcttcctc cgagaaaaca gatttcttca caagaatctt agagctgctc
     6541 tttatttgtt tccttaggca ataacttcga gcaaatgata atagagagca tagccccaaa
     6601 tcctgcacct gaaatcttca gtgatttatc ataaactgcc ggctcaaaat aaataaatcc
     6661 caaaatccaa attaaaaaga accccatata aatccaaaac actttatctt catttttctg
     6721 ggtataacct ttataaacaa taaccgcact acttaccatc atcggaataa taaaagtcaa
     6781 aaacacatta ttgaacaggg taccaaatcg ttcaaacgga ttactgtact cccgcataat
     6841 atggtgggca atccagataa ccaccataaa aacaagttga gagaaaataa caattttggc
     6901 aaataagatt aattttgaaa ataatgaacg agaaatcata tttaaacctc caacaaatac
     6961 gcctttaaat gctgcaactt atcccttacc gcagccgctt tttcaaattc cagatctttc
     7021 gcaaaatcac gcatttgttg ttccagcgtt ttaagctctt tttccagttc tttacgggat
     7081 ttcggcttgt agtcggttgc agaattttcg gcttttttga ccgcttgttt gccccgtttt
     7141 ggcttgtcgg attgtccgat gtcgagcaat tcacccactt ttttgttcaa cgcttgtggc
     7201 gtgatgccgt gttcttcgtt gtatttcatc tgcttttcac ggcggcgttc ggtctcagta
     7261 attgcttttt gcattgagtt ggtaatgcgg tcgccgtata aaatcgcttt tccgttgagg
     7321 tttcgggcgg cacgtccgat ggtctgaatt aacgagcgtt cggaacgtaa aaatccctct
     7381 ttatccgcat caagaatggc aaccagcgac acttcgggca tatctaagcc ctcacgcaat
     7441 aagttgatcc ccaccagcac atcaaacatt cccattcgta aatcgtggat aatttcgacc
     7501 cgttccaccg tgtcaatgtc gctatgtaga taacgaactc gtacgccatg ttcgtccaaa
     7561 taatcggtga gatcttccgc catttttttg gtgagtgttg tcaccagcac ccgttcgtcc
     7621 accgccactc gtttgtgaat ttcagacagt aaatcgtcca cctgcgtagc aacggggcga
     7681 acttcgataa tcggatcgag caagccggtt ggacgaacta cttgatccac cacatcggga
     7741 tttttctcca attcatacgc ccccggtgtg gcagaaacgt aaatcgtctg tggtgaaaga
     7801 cgttcaaact cttcaaatct caacgggcgg ttatccagtg cagacggcag acggaaaccg
     7861 tattgcacca atgtttcttt tctcgctcgg tcgcctcgat acattccgcc aatttgtggc
     7921 acagtaacgt ggctttcatc aatcaccaaa ataccgtccg ccggcatata atcaaacagg
     7981 gtcggagggg cttcgccctc ttttctgccc gagagatagc gtgagtagtt ttcaatgccc
     8041 gaacagtagc ccagctcgtt catcatctca atatcaaact gcgtacgttg ggcgatccgc
     8101 tgctcttcca gcaatttatt ctctttgatg aaataggtgc gacggtcggc aagctcgacc
     8161 ttaatttgct cgattgcctc caaaatccgt tcccgagggg tcacatagtg agttttcggg
     8221 taaatggtat agcgaggcac cttgcccaag ctatgccctg taagcggatc aaacagcgac
     8281 agattttcga tttcatcgtc aaacagctct acccttaacg ctacttcatc gctttcggca
     8341 gggtaaatat caatcacatc gccccgcact cggaaagtcg aacgttggaa cgcctgatcg
     8401 ttgcgagtat attgcaattc ggcaaggcga gagagaattt cacgctgccc aatcatcgcc
     8461 cccacttgca aatgcaacat catctgcata taagcgtcca catcacccaa gccgtaaatg
     8521 gcagaaacgg acgccactac aatcgtatct cggcgttcca aaaaggattt ggttgcggaa
     8581 agtcgcattt gctcgatctg ctcattgata gaggcatctt tctcgataaa ggtatcgctt
     8641 gccggcacat aggcttcggg ctggtagtaa tcatagtaag agacgaaata ctccaccgca
     8701 ttttccggaa agaacgcttt catctcggca taaagctggg cggcaagggt tttattcggg
     8761 gcaagcacca tcgccgggcg attgagcttg gcaatcacat tagcaatggt aaaggttttc
     8821 cccgagccgg ttacgccaag taaggtttga tgtgccaagc cgtcatttaa gccttcggtc
     8881 aatttggcaa tcgcacttgg ttggtcgccg gagggcttga aaggagaatg gaggataaag
     8941 ggtttgcctt gcttgctcat agaaaatcct gtcttaaaaa atcggtttat tttagcacaa
     9001 gcaagcggtc gtttttatcg ggatttttgc aaatttattg taactgctta tattgatcca
     9061 ttcttggatc taacacccta acaataaaga taccttttgg gattggttta taataaatag
     9121 aatgtgagcg gtggtaatga cagcgtaaca aagggcgaat aaagtaacgc taaatctcgc
     9181 tctgccctaa cagaaagttt atacattacg ttttgccttg ctgataatag attgaacggt
     9241 ttcctcagaa acaccgcttt ctaagccttc atcaattaag gctcttagct gaattagttg
     9301 ctgttcttgt gcttccaata tttttaatgc ggcactgatg acctcgttgg tcgaaccata
     9361 acgcccactt tcaaccattt ggttcacaaa ttggcttaat ggctcagcta aagttacgct
     9421 ggttgttcta ctcattacta ttcctatctt attgattatt gagcagattg taatggctct
     9481 aatttagata agcaagcggt ctatttttag caataatttg caaaacaaaa tgtgatttac
     9541 atcacaaaat cagcattatt ttttgcgaat aattcgcaat aaggatatta tgtcgcaata
     9601 tttttattaa aaggaaattt ctatgcgttt aaccaaactt gcttttgcac ttttgcactt
     9661 tctggctttt ttgtggctac tcaagcggca gctttagact taactaagga aaccgaggct
     9721 tataaacaat ttgtggtaga acagattgac caactggtta ccgatacgga aaaatttgtc
     9781 ggctacttaa acaaaggcga tgtgcaaaaa gcgaagaaaa tttacccgct tgcaagaatg
     9841 tattttgaac gttctgaacc gattgcagaa agttttggcg atttagaccc tcgtattgat
     9901 gcccgtctgg cagatttagc cgaagaaggt aaaaccgaga aagattggtc aggtttccat
     9961 aaaatcgaga aagtattgtg gcagaaaaac accactaaag gcacaaaagc aacggcagaa
    10021 caattattaa aagatgtaaa agagctgcgt gcgaaaattc ccactgcaga agttacccct
    10081 gagccgatga ttaccggtgc ggtagattta ttaaacgaag tttctactac taaagtaacc
    10141 ggtgaagaag aaattttctc taaaaccgac ctttacgatt ttaaagccaa tattgaaggt
    10201 gcagaaaaaa tctatgagat ttttaaaacg caattagagc aaattgatgc caaactctca
    10261 acagaaatcg gctctcgttt tgcggctgtc aatgcgctgt tagcaaaaca caataaatct
    10321 aaaaccggtt atgattatgt gccttataac aaactgtcaa aagcggatat taaagcgtta
    10381 gcagaggctg taaaccaatt aggcgagccg ttagctcaac ttggcgtact tttaaataaa
    10441 tagtggagca aaaatgatgg cagaaaccac ttctcgccgt gattttttaa aacataccgc
    10501 attagtagga gcaggcttat tgtctgctcc tgctttcgct ttggaatcac gacaaatatc
    10561 tgaaaaatct caaaatcaat acgactttta cggcaaacat caagctggta ttgttagccc
    10621 tgcacaaaaa catatctact ttttagtgct ggatttagac accactgaca ttgccaaagt
    10681 aaaaacattg tttcaaaact ggacggaata tagccgtaac ctcacgcttg gcaaaaatgt
    10741 gaaaccttat agtgctaatg cttatgttcc accggcggat accggtgagg cagatagcct
    10801 ttcggcacag aatctcactc ttacttttgg cgtcagtgcc aatttcttta caaagctcgg
    10861 cattgaaaaa cataagccga aagaactgaa tgatttaccg catttccctc gtgatcaact
    10921 acaagcagaa tacaccggtg gcgatatttg cattcaagcc tgtgcagacg atccgcaagt
    10981 ggctttccac gctgtgcgta atttggtgcg tgttgcccgt ggtgaaatca aaatgaaatg
    11041 gtcgcaaatg gggtttaact cctttgccaa tcaagacaca cctcgtaact tattcggttt
    11101 taaagacggc actgccaacg cagaaagttt aaaagatcag gaaaatacgg tatgggtgca
    11161 acaagagggc tggctcaaag gcggttctta tttagccgtt cgccgtgtta aaatgttctt
    11221 ggaaacttgg gatcgcaccc atctccaatc ccaagaagaa accttcggtc gtcaccgtga
    11281 ttccggagcc ggaatcgggc atcagcacga atttgataaa ttagatttag ccaaaaaaga
    11341 cgaaaaaggc aatgcagtaa ttccggaagt ttcacacgct catcttgcca ataaaacggg
    11401 gctgaaaatc ctacgccgtt cattctccta ttcaagcggt attgatgata aagggcaatt
    11461 tgattcaggg ttgttgtttg tctctttcca acaaagtccg gagcaattta tcaaaatcca
    11521 gaacgctctc ggcaatgtgg ataaaatgaa tgaatacatc actcatatcg gcagtggttt
    11581 atttgcctgt tttgccggtg tgaaagatga aaatgactac cttggcaaag cgttgtttga
    11641 tttaatttag ggaaaaggaa atgaaattaa aagcattagt gctaattccg ttactctttt
    11701 cgagtacagg attgcttgcc aaagtgaatg tcagcccctt atttgttcag ctttccgatg
    11761 caatggcaga gagtaaaaaa ggggaatttg caaaatccag ccaaaatttg accgctttac
    11821 agcacgattt tgagcagatt agccagcacg attccctcgc cggagttgaa gtacagaccg
    11881 ctctgaaaaa agcgattgaa acacccaatg ctgaaaactt agagagcctt tctaaaaact
    11941 ctatgcgttt gaaaaagaac aaaaccctag cggttatgct gaaaaacatc aggattttgt
    12001 ggcaaaaatg acgccgcttt atgcagaact tgctcaaacc gtgccaactc aagaaatcgc
    12061 caaaatcaaa tgggcggctt atcagtttgg taagaattgg gtaaaacagg aaaaagcagt
    12121 acgggaaatc agtcttcccc attatggcaa atttgagcgt attcttggtt taatgcgaat
    12181 taatctgaac gctgaaaagc cggatatggc aaaaatcagt gaactggttt ccgaactagg
    12241 tgtggtaatg gcagacttta agcaagttaa agtgaaatag taaaaaatcg gggcaaatta
    12301 tttgccccga taacactaaa ataacgtcca aatcggttta cattcttggg gtaattccaa
    12361 acttttaccg agctcaatcc agccagttgg gtagtggaaa tcagaaccga ccgagccata
    12421 taaatcaaac tcttttgccc aacgggcaag taattgccgt tgatcaggtg tttgtccgca
    12481 gcctgatact tcaatgccat cgcctccggc ttgtttgaaa tctgcgatta aacggcgaat
    12541 ccaacgagca gtcattttat agcgtagcgg gtgagcaatc gaaatcacac cgcctgaggt
    12601 gtgggtaaca ttcaccgcgt cttctaaact actccatctc ggtttcacat aggcaggttt
    12661 ccccattccc agataacgct taaaggcgtg ttcaatattg cggacatagc cttgttcata
    12721 caaaaaacgc ccataatgtg cccgagttac ttcccctgtt gccaacgctt ttgccccctc
    12781 ataggcattt gcaatcccga cttttgctaa tttttcacca atttcgaccg ctctctcttc
    12841 ccttaattgg gcttggttat ccaaaaactt caccagctcc tcgttgtttt catcaatatt
    12901 caacgccgca agatgaatac ttttttcttg ccataaaatc gaaatttcca ccccagagat
    12961 aagctcaagc ggttgatttt gggcaaaatt tttcgcttct tgaatgcccg aaatcgtatc
    13021 gtgatcagtt aaagctagca ttgttacccc ttgctctacc gcacgttgta ccaattcagt
    13081 gggagaaagt acgccatcag aggcggtact gtgggcgtgt aaatcatatt tcattttatt
    13141 tatccttaaa ttaagccggc agtcctgaaa aattggcgat aggcttcggt tttgttggct
    13201 aagctgagtg gataagccct cgacgtcgaa ggcaggcgat ataaataaag ttctcttgtg
    13261 gcggaataag gatagaccac ccattcgttg gttttcggag ctttgtgttt ttccggcaat
    13321 aaaccgagca acgtatcggt tgccaaacca cctgtggtaa atagccattt cagtttgggt
    13381 aatttgagca acagttcgtc catatcgata ggatcaacaa tttttaaatc tttatctgaa
    13441 gcgtttcctt ttaaacgaat cgctgttttt gccgaagaac agagcgcaac gcccttttct
    13501 cgcaaaaacg cctcaatccg aatcggatca aagcgttttt cttcaccaac tcgaaaatag
    13561 ttagggtcag cataaaaaat attgcccata attcgccaca tatcattttg aaaattcggg
    13621 taatgaaatt ccatacaacg cttttccgat gtaggtggaa aagtgccgac cattaccacc
    13681 gttgcttgtt caggtaaaat agggtcaaac gggtgctgtt ctagcggtaa attatccatt
    13741 gtcatttaat caactctttt aacatcttga gcttttcggt tttatctagg ggctgttccg
    13801 ctactctgtt aagctcgctc agcaattttt catcttttgc aacattttga cgataaatga
    13861 ccgcttgttg ttgcgaaatc tgctcggcgt aagcggtcaa attttctaat aattttacct
    13921 tttccgggtt gtcgtgatgt tgttggaaca agtcgtcaat cgattgggcg aactgcgctg
    13981 cttttgcctc aatttgctgg ttgcaatgtt tctgccattt gatctgctcg gctcgactga
    14041 gtgtttgtgg atagtgcctt gctcggtaat ggaatagtaa cgcctctact cgagggtctt
    14101 caaatttcaa gccgtggttg gctaaatctt caggcggtag cgtgcgtaaa atcgccatat
    14161 tatttttatc cgcaggcgag aaaaagccgt catacaaagt ggtttctaca ttggtcgaag
    14221 gctcaaacgt gcgttcttca ttaaaaattt caatcacttt ttcccgaatc agcgatttct
    14281 gtgcttttaa agttttcaaa ttttccaaac ataaagctct gtctatgcct aaacgttctg
    14341 cattttcagg cagtaaggtt tttgccggtg ctaaaatcgg gcatttatta atatgcacta
    14401 attttaacgg cacaggtaac tcattttcgg ctaattcatc tcgtttggtg tataaacgct
    14461 gacgtaaaac ctctgcattt tcagtcaata agccattcat atcgcccgat aaatcacaca
    14521 caattacggc attttgatta gttgagtgcc aagccagtgg cacaacccaa gcggtatttc
    14581 ctcgatagtt gcccagcata ccggaaacgt gcacaagcgg tgtcatttca ccagtgtcaa
    14641 ttaacttctc tacttctttt ttactgcgta aattaaagaa aaaatcgaac aactttggct
    14701 gtttttgctt aattaatttt gccattgcga tggtggcata cacatcagac atcgcatcgt
    14761 gtgcattttc atgggcaatg ccattggctt tggtgaggtt ttccaattta aaacttggca
    14821 taccggtttc atctgttggc cattcaatac catcaggtct taacgcataa caggcacgga
    14881 ctaaatctaa caagtcccaa cgagaatttc cgtttttcca gctatattcg taaggatcgt
    14941 aaaaattgcg gaagaaggta taacgggtca tctcatcatc ataacgaata ttgttataac
    15001 cgatagtaca agtattcgct cggctaaatt cagcgtgaat tcgggctgca aattccggct
    15061 cagatacacc ttcagcgtta cattgttgcg gtgtaatccc ggtaaccatc accgcttcgg
    15121 ggctgggtaa ataatccggc gtttgcttac aaaaaaacat taccggttca ccgataatat
    15181 taaaatccgc atcggttcga ataccggcaa attgtgccgg acgatctaac gccggactca
    15241 cgccgaaact ttcataatcg taaaagaaaa aagagaattt atcgctcatt cgttcaattt
    15301 gttagaaaaa attgggctga ttgtagcaca gtaaggcaga aaggagggaa tacaagcggt
    15361 caatttccgt tagaaatttg caaatgctaa aataaaaaaa gcccctaatc aaaaaagcga
    15421 aaaggggcgg aggtcttacc taaggaaata tgaaaaaaac ttgcataaat ctgttacata
    15481 tactcagact gcctaactga acgaaagttc attaaaaaat aaaaaatttt ttaacaccaa
    15541 gcaaaatcag atttaactac ttgcaatgct tatatagact cacaaatttg caaataattc
    15601 cgtaaaatta ttatatttcc ccctattttc ttgtagaata cggaacgttt cttatattaa
    15661 aactcacaac aaagaatttg aggtattcaa tgtctaaatt tccaacagtt tcggaaatcc
    15721 tatccggcaa gatagcggta ggtgaagaag cgacagtgcg tggttgggtg cgtacccgcc
    15781 gtgattcaaa agccggttta tctttcttga gcgtttacga tggttcttgc tttgacccaa
    15841 ttcaagcgat tattaataac gatctaccaa attataatgc cgaagtatta catttaaccg
    15901 caggttgctc tgtggtggtg accggtaaag ttgtggaatc ccctgctgaa ggtcaagccg
    15961 ttgaattaca agcaagtaaa gtggaagtgc ttggttgggt ggaagatcct gatacctacc
    16021 caatggcagc gaaacgccac tctatcgaat atctgcgtga agtcgctcac ttacgccctc
    16081 gtacgaactt aatcggtgca gttgctcgtg ttcgtcactg tttagctcaa gctatccacc
    16141 gtttcttcca cgagcaaggt ttctattggg tagcaacacc tgtaattacc gcctcagata
    16201 ctgaaggtgc aggtgaaatg ttccgtgttt ctacgctgga tttagaaaat ctacctcgtg
    16261 gcgaaaacgg caaagtggat tttaaccaag atttcttcgg taaagaatcg ttcttaaccg
    16321 tatccggcca gttaaatgcg gaaacctatg cgtgtgcctt aagtaaagtt tatactttcg
    16381 gtccgacatt ccgtgcagaa aactcaaaca caactcgcca tcttgcagaa ttctggatga
    16441 tggagccgga agttgccttt gccgacttaa acgacaatgc aaaattagcc gaagatatgc
    16501 tgaaatatgt gtttaaagcg gtgcttgcag aacgtaaaga tgatatggaa tttttcgtta
    16561 aacacgttga taaagaagcg attagtcgtt tagaaaactt tatcaattcg ccatttgctc
    16621 aagtagatta caccgatgcg attgagatct tattgaaatc cggcaaagaa tttgaattcc
    16681 cggtgtcttg gggaatcgat ctttcctctg aacacgagcg tttcttagcc gaagaacact
    16741 ttaaatcgcc ggtggtcgtg aaaaactatc caaaagacat taaagccttc tatatgcgtt
    16801 taaatgatga cggcaaaacg gttgccgcaa tggacgtttt agctccggga atcggtgaaa
    16861 ttatcggtgg ttctcaacgt gaagaacgtt tagaagtgtt agatcagcgt atgaatgaaa
    16921 tgggcttaaa ccctgaagat tactggtggt atcgtgattt gcgtaaatac ggtacagtgc
    16981 cacactcagg tttcggttta ggtttcgagc gtttaatcgt gtatgtaacc gggttacaaa
    17041 acattcgtga tgtaatccca ttcccacgtg ctccacgcaa tgcgaacttc taatttgcaa
    17101 aaaagtaaga gaatttaacc gcttgcaaca agcggttaaa aaaggcgaaa attttaccat
    17161 tttcgccttt tgtttcttga tttctgttta agctaacctt tcaaaatttt atttggctct
    17221 ttcgctattt ctcttgccag ctttggcaca agatagcctg aagtgatacg ctgtaattct
    17281 cggtaaatct caccagcctg ttcatcttca atatagaaat ggctcgcccc tgccacttta
    17341 tcaaataaat gcaaatagta aggcaaaatc ccatattcaa aaagtttatc acttaacctt
    17401 tttaaggttt gagcattatc gtttacacct tttaacatca ccgattgatt cagcaataca
    17461 acgccggctt ttttcagttg agccattttg tttgcaaaaa cagcatcaat ttcattggcg
    17521 tgattaatat gggtaaccaa cacgacattc aagcgagatt ttgataaccg ttcacataat
    17581 tctgtcgtaa ttcgattggg aataacgacc ggcaagcgtg aatgaatacg cagggttttg
    17641 atatgcgaaa tctgctctaa ttgcgttaat atccaatcta agtcctgatc ttttgccatc
    17701 agcggatcac caccggacag aatcacttcc tccagctcgg gatgctcagc aatataagtt
    17761 agtccctgtt gccacacagc tttaccgctt ttcacttcct cataagggaa atgacggcga
    17821 aaacagtaac ggcagttaat cgcacaactg ttttttagca taaataacaa acggttatgg
    17881 tatttatgta aaatattcgg tgctgggctt tgttgctctt ccaatggatc taccacaaac
    17941 ccttctgcct caataaattc cgcctgtaaa gacattgctt gcaaaaaaag cggatcgttt
    18001 gggttaccct tttccatttt ttcggcgaac attcttggca ctcgaagagc aaataattta
    18061 cgggcagcta tatcgccctc aaaatcattt ggattgagtt caagaaattg taataagtcg
    18121 atagggttat taaaggcttg agccagctcg gttagccaaa gcggtttgat ttgaattggt
    18181 tgcattgaat attgtagata caaggggcag gtttttgcct gcccgcaaat aaaaataatt
    18241 atggaattaa gttacattgt aatggcgtgc catttggatt aaccattaca gttggtgagg
    18301 tttgtacacc ttgtgcagcg actaggtatt gcacgcctga aatacaataa cggcgataac
    18361 catcggtttt ttctactaaa aacggatcga tttgaccgcc aatactctta aattctgcaa
    18421 tagcaggaac tgctccattt gcaacatttt gtgcagaatt gaccgcttgt gcatttgcat
    18481 ccgcaggctg gctaggctga tttgcatgtg catttgatga catcatatca cctaaaatat
    18541 aaccggctgc tgcccccatc gctacatttg ccatcgtgct gccttgacgc acttgtggct
    18601 gggcagttgc actgtttggc gtattggcaa aagtagcatc tttttgttgc gtttgctgat
    18661 ttgtggttga tttttgagaa gctaccggct tagttgctac cgcttttgac gggctaactg
    18721 aacggaagct cccaccgcca cgttttgcct ctgccacggt tgcaacagaa acggctaaaa
    18781 tcgcagaaag agtaatcagt tttttcattc gcattcctta tcaataaagt ttgaaaaatt
    18841 atagcaaaaa tcgcaagaga tctttcgcta attttgtgaa tttaggttat tatatggctc
//
LOCUS       DANLXD010000049        18768 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.049, whole genome shotgun sequence.
ACCESSION   DANLXD010000049 DANLXD010000000
VERSION     DANLXD010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18768)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18768)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18768
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.049"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(65..901)
                     /locus_tag="PXD18_001382"
     CDS             complement(65..901)
                     /locus_tag="PXD18_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HDL6301817.1"
                     /translation="MLPHIYIGTGGYADTDLIGTLYPFGTAKEDFLFVYSQHYDTLEI
                     NSTFHAPIGQKAFEGMVQKAEGRLNFSVKLHQDFSHQRTATLDQAQLFLNALAPFTAE
                     GLLANLFVQFPTQFERMPLNRRYLAELCQWFADYPLAIEFRHPSWHIPAVFDTFAKSS
                     NLIWCNVDYPQNIGLPAFHFFANQRTAYLRLHGRNPNWWKGQSAAERHDYRYSDEELK
                     GLAELLFSRRTEFDRLYLYFENTTKSHAFYNIQTLKGFLAEKGFQIKPVPENLLGQQS
                     LF"
     gene            1009..1884
                     /locus_tag="PXD18_001383"
     CDS             1009..1884
                     /locus_tag="PXD18_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6301818.1"
                     /translation="MWIWFTLLAAVAQAGRNAFQKQLSVNVPVLGVTLARFFYAVPLA
                     SGYLYFLYQYDDNLNIPHFPPLFFVYAIGAGLAQILATSLMVQLFHLKNYAIGVGLAK
                     SEAVWAALLGVLFFGVTISGIGWLGVVLGGVAIFLMTGSGNLRQLSWKTLFLGIASGL
                     CFALTSLWVREASLQLNSHYLLSAAWVLFSVISFEAVILVIYLALLQKETLIKFFRFP
                     KLGMLTSLFSFLGSFGWFNAMSLNHVAFVKTLGQVEIFFILGISYFVFKERLKIQDFI
                     GLILVVIAAILVVLG"
     gene            2020..2460
                     /gene="nudB"
                     /locus_tag="PXD18_001384"
     CDS             2020..2460
                     /gene="nudB"
                     /locus_tag="PXD18_001384"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HDL6301819.1"
                     /translation="MNYKNPHSILVVIYAKNTQRVLMLQRKDDPDFWQSVTGSINIGE
                     TPLEAAEREVSEETGLQTFEQKQPLVDCQKQIEFEIFPHFRYKYAPNITHCVEHWFLL
                     PLDSEQEPILTEHLAYRWVSVEDAVRLTKSPNNAQAIQEYLTSK"
     gene            2473..3213
                     /locus_tag="PXD18_001385"
     CDS             2473..3213
                     /locus_tag="PXD18_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL6301820.1"
                     /translation="MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGGDTS
                     SNPRLRAAVDKALSSNMTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECL
                     SDNANRTISQVRPSFTKCGGNLGTEGSVGYLFSKKGLILVANADEDALTEAAIEAGAD
                     DIQPQEDGSFEIYTAWEDLGSVKDGIEAAGFKIENAEVTMIPSTTVELDAETAPKLLD
                     LINRLEDCDDVQNVYHNGEISDEVAALL"
     gene            3343..3870
                     /locus_tag="PXD18_001386"
     CDS             3343..3870
                     /locus_tag="PXD18_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301821.1"
                     /translation="MKLVKFVPALAATLVLAACSNANTQSAPQQAQDAVTKVAEQATQ
                     QVNEIAGNAPRASGAVKVEKATDGAKSIVYRCQSGKRVTANYVFQGEEAKAVNLLVQS
                     GGKTQKIPTLTRDASNQDSTSFKTDKYSWDLDTGFTLSSNGQSGMLTKYGAKTDTIVA
                     KLCDVDKALTSKLNK"
     gene            3937..4515
                     /gene="ruvC"
                     /locus_tag="PXD18_001387"
     CDS             3937..4515
                     /gene="ruvC"
                     /locus_tag="PXD18_001387"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HDL6301822.1"
                     /translation="MAIILGIDPGSRVTGYGVIRQNGRQLEYLGSGAIRTTAEDLPTR
                     LKRIYAGVSEIITQFQPNMFAIEQVFMAKNPDSALKLGQARGTAIVAAVNHDLPVFEY
                     AARLVKQTVTGIGSADKVQVQDMVTRMLKLSAKPQADAADALAIAITHAHSIQHSLIV
                     AKQSQQNVSSEKEQILALMKTRYSRGRFRLKG"
     gene            complement(4581..5861)
                     /gene="murA"
                     /locus_tag="PXD18_001388"
     CDS             complement(4581..5861)
                     /gene="murA"
                     /locus_tag="PXD18_001388"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDL6301823.1"
                     /translation="MEKFRVYGPFSLNGTVDISGAKNAALPILFAAILAEKTVTLKNV
                     PDLKDVDTTFKILRQLGVTVEKGSDKGVVHIDASKINNYVAPYELVKTMRASIWALAP
                     LVARFQLGQVSLPGGCTIGARPVDMHISGLEKMGAKIELDEGYVKATSNGRLNGARIY
                     MDKVSVGATLSVMMAGTLAKGTTVIENAAREPEIVDTADFLNAMGAKISGAGTDMITI
                     EGVEHLGGCEHSVVPDRIETGTFLVAAAISGGRITCRNTKADTLDAVIEKLREAGMQV
                     DVTENTITLDSLGRRPKAVNIRTMPHPGFPTDMQAQFTLLNTVAEGTSRITETIFENR
                     FMHIPELIRMGAKAEIEGNIAICYGVEQLKSAEVMATDLRASISLVLAGCIATGETIV
                     DRIYHIDRGYEHIEEKLRQIGARIERFSAPFEGE"
     gene            complement(5971..6231)
                     /locus_tag="PXD18_001389"
     CDS             complement(5971..6231)
                     /locus_tag="PXD18_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA/IbaG family iron-sulfur metabolism protein"
                     /protein_id="HDL6301824.1"
                     /translation="MNPSQIEEILKQALSDATEVHAQGENAHFGVIVVSDSIASLSKV
                     KQQQAVYAPLAEYFTTNAIHALTIKVFSVEKWKTERLLNMVG"
     gene            complement(6264..6587)
                     /locus_tag="PXD18_001390"
     CDS             complement(6264..6587)
                     /locus_tag="PXD18_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HDL6301825.1"
                     /translation="MPQKTLQWDIQQNNESLFVKLSGELTRNTLLPLWKQRASFLSPT
                     GKQSLYWDLKEITRIDSAGFTLLAELLNHYHKIIPNSLINTPDSVRTLAALYDLDGWF
                     EQFII"
     gene            complement(6599..7234)
                     /gene="mlaC"
                     /locus_tag="PXD18_001391"
     CDS             complement(6599..7234)
                     /gene="mlaC"
                     /locus_tag="PXD18_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HDL6301826.1"
                     /translation="MLKNIKKIIVTGLVAVSALFSTTAFAETSPYVLMQQTADKLFGD
                     IKANQAKIKSNPEYLRTIVRNDLMPHVHVKYAGQLVLGKNLSAATDAQKEAFFNAFGQ
                     FVEQSYAQVLTQYQDQSVQIESPKSVDGKSIVSIRVNVSGKGAAQPIKLDFKWRKNSK
                     TGEWQAYDMAAEGVSMVATKQNEWAGVIRQKGIDALIAQVAQSAKQPITLK"
     gene            complement(7280..7804)
                     /gene="mlaD"
                     /locus_tag="PXD18_001392"
     CDS             complement(7280..7804)
                     /gene="mlaD"
                     /locus_tag="PXD18_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HDL6301827.1"
                     /translation="MRQSIKYEFWVGLFVLLGLAALVFLGLRVANVQGFSNEKTYTLY
                     ATFDNIGGLKVRAPIKVGGVVVGRVADISLDNKTYTPKVALAVNESFNQIPDTSSLSI
                     KTSGLLGEQYVALNVGFVIEGETAMMKEGDTFVDTNSAMVLEDLIGQFLYGDKKSDKT
                     EDEKASDSAEPKAE"
     gene            complement(7825..8601)
                     /gene="mlaE"
                     /locus_tag="PXD18_001393"
     CDS             complement(7825..8601)
                     /gene="mlaE"
                     /locus_tag="PXD18_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HDL6301828.1"
                     /translation="MVNFISSIGAVVINFIRTLGRSAFMLWGALIGKPEFRKHTPLLI
                     KQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAESSLGTLVSLSLLRELGPVV
                     TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPVLAAI
                     FTAIGIWGGSLVGVDWKGVDGGSFWSVMQNSVNTSDLINGFIKSVIFAFAVVWIALFN
                     GYDCVPTSEGISQATTRTVVNASLVILGLDFILTAIMFGG"
     gene            complement(8594..9397)
                     /gene="mlaF"
                     /locus_tag="PXD18_001394"
     CDS             complement(8594..9397)
                     /gene="mlaF"
                     /locus_tag="PXD18_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid ABC transporter ATP-binding protein
                     MlaF"
                     /protein_id="HDL6301829.1"
                     /translation="MTKTENLVEVKNLTFKRGERVIYDNLNLQVQKGKVTAIMGPSGI
                     GKTTLLRLIGGQILPESGEILFDGRDICKANNKELYEIRQRMGMLFQSGALFTDISTF
                     DNVAFPIREHTRLPEELIRKLVLLKLEAVGLRGAANLMPSELSGGMARRAALARAIAL
                     DPDLIMYDEPFTGQDPISMGVIVELIKELNQALNLTSIVVSHDVKEVLSIADYAYIVA
                     DKRVIAEGTPEILQASEDPQVVQFLAGKADGPVRFHYPAKDYTEELFNG"
     gene            9622..11016
                     /locus_tag="PXD18_001395"
     CDS             9622..11016
                     /locus_tag="PXD18_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HDL6301830.1"
                     /translation="MNKTMKKSFLTAFILGSTIAAMPAYAEATLPTAVNGQAVPSLAP
                     MLEKVRPAVVSIAVEGKTKGDSRRSREIPEEFEFFFGPHADLFGNRSSAPRNFRGVGS
                     GAVINAEKGYVITNNHVIDNADKITVKLEDGREFKAKLVGADPLSDVALIQVEDPKNL
                     TEIKFADSDKLQVGDFTVAIGNPFGLGQTVTSGIISALGRSTGQSDEGYENYIQTDAA
                     VNQGNSGGPLINLNGELIGINTAIISPSGGNAGIAFAIPSNMANSLVTQIIEFGEVKR
                     GMLGIKGGELNADLAKEFNISTQQGAFVSEVLPDSAAAKAGFKAGDVITEINGQKIRS
                     FSELRAKVATSGVGKEIELTYLRDGKEAKAKVTLQSDSEAKVTASNLIPALKGADFNN
                     YNAKGIKGVEISNVEKGSIAEMRSLKKGDIIIGVNRHSVENIADLRKILETKPSVVAL
                     NIVRDGANFYVILQ"
     gene            complement(11068..11829)
                     /locus_tag="PXD18_001396"
     CDS             complement(11068..11829)
                     /locus_tag="PXD18_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C biogenesis protein"
                     /protein_id="HDL6301831.1"
                     /translation="MKTREQLSQENYQQAVKFAQHFADDVRQEFEREAEQRYQFERTQ
                     FEQSVLQNNAQNRPLAKIASLSCVAILLLAMTYYGLSGRYQVVQSGLQQHQDFQQQMS
                     DAHGTSKNERYILSLQNQLRENPNNGDLWYELGQAYALSNDFDSALVCYDNAEKLLGK
                     RAAILGAIATARYYDNGQKMTVEIQAIIEQALQLDKNENASLLLLASDSFLNNNFQQA
                     LDNWRKVLDSNNDSINRRAIIQSMEMARQMLNSQQ"
     gene            complement(11816..12268)
                     /gene="nrfF"
                     /locus_tag="PXD18_001397"
     CDS             complement(11816..12268)
                     /gene="nrfF"
                     /locus_tag="PXD18_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfF"
                     /protein_id="HDL6301832.1"
                     /translation="MRNSIISIGFLQKIRKILPLVFGLLLFVGTVQAEMVDTFQFQNE
                     ADRVRAISLARSLRCLQCQNQNLVESNATAAYNMRIEVYEMVNQGKSNEEIIRIMTER
                     FGSFVNYDPPFTPQTWVLWGLPVGLFSLLFLAILWRTRKNKGNKNENA"
     gene            complement(12258..12791)
                     /locus_tag="PXD18_001398"
     CDS             complement(12258..12791)
                     /locus_tag="PXD18_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HDL6301833.1"
                     /translation="MKKILLLIPLLLLVVIVGFLTVPLMNKDALAPTEDWQGKPFPEF
                     VGKNLLDSNAHLNNNSLPKEPYILNVWVSWCTWCIKEFPILLELKQKGVPIVGLTYSD
                     RPNDALNALKNWGNPFSLIIDDYEKGFLIQTLKVSSAPSSYLIDKHGVVRYQQKGYNP
                     DFAQDFLPKLEALRNEK"
     gene            complement(12788..14692)
                     /gene="nrfE"
                     /locus_tag="PXD18_001399"
     CDS             complement(12788..14692)
                     /gene="nrfE"
                     /locus_tag="PXD18_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfE"
                     /protein_id="HDL6301834.1"
                     /translation="MLPELGYFSLLLAAISAIFQVGFALLGEVRKQYHWLALAPLFTY
                     LQAAFTTFSFSTLAYAFLTDDFSVIYVAAHSNSQLPDFFKFAATWGGHEGSMLFWLTA
                     LVIWSAVFCKFSQKIDRLFANRTLAMLGLIALGFLLFILLVSSPFERGFPPPPEGRDL
                     NPMLQDIGLIFHPPLLYLGYVGFAVSFAMIVAALVSGGMDAAIMRWLRPWTMISWGFL
                     TAGIILGAWWAYYELGWGGWWFWDPVENASLMPWLLGTALVHSLIVSQQRGIFYYWTI
                     LLAIFAFALSLLGTFIVRSGVLTSVHAFAVDPDRGMALLILFFGLSFIALALFAFRAN
                     LWQGKVRFNLLSKETAFLLINGLFSVAASVVLLGTFYPMIFTVMNWGSISVGAPYFNS
                     VFTPLALLLMIVMGFAVVLGWKQISNKQILVKLWLLPIAVGLALGLIYASISQREHFA
                     LQPLPTIFISLAIWIILTHLPYSQKMWQIRPLAMRLAHIGFAVCVIGAMMNSYYGDEI
                     GVRLKPNQAAELAGYTFKYEDYHDLIGPNYTAEQAVFSISRDEQLLATVTPERRYYDV
                     RTMTMAEVGLFHHNLDDIYIVMGDKFGNLEYAFRLHYKPYVQALWLGGMMMVMAALLA
                     LFGYRRENKK"
     gene            complement(14962..15909)
                     /gene="nrfD"
                     /locus_tag="PXD18_001400"
     CDS             complement(14962..15909)
                     /gene="nrfD"
                     /locus_tag="PXD18_001400"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase subunit NrfD"
                     /protein_id="HDL6301835.1"
                     /translation="MNEYVPFQTPNLVWDGTIAIYLFLLGISSGAVQLAIAYRNSGVK
                     MEKPSQNWIIRSAAILGTLPTIIGLLLLIFHLTKPWTFWKLMFNYNFTSVMSMGVMLF
                     QLYMAVLVVWIAIMFKDWIVRYLPVVSGLIDFAEAKLLKPIEFILFVLAAVLGAYTGF
                     LLSALVSYPMLNNPVLPALFLASGASSGIAATFLVILLAGKLSGESHEVHFMHKFEVP
                     IMVTELGLIVAFFVGLHFGGADKSLALTHALNGFWGNVFWIGVMLIGIAIPLVANIFG
                     SHRLKHNVKFIILISVFDLIGVLCLRYFILYAGQLTVAS"
     gene            complement(15909..16586)
                     /gene="nrfC"
                     /locus_tag="PXD18_001401"
     CDS             complement(15909..16586)
                     /gene="nrfC"
                     /locus_tag="PXD18_001401"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase Fe-S protein"
                     /protein_id="HDL6301836.1"
                     /translation="MTCTRRDFVSGAGAIAVVASTGLATSITLATEKEQKKIRYAMVH
                     DETACIGCTACMDACRTTNKVPEGVSRLEIIRSEPFGEFPNVQYEFFRQSCQHCTNAP
                     CVSVCPTGASFIDPETGIIDVHSDLCVGCQYCIAVCPYRVRFIHPEKKSADKCNFCRD
                     TNLAEGKQPACVEACPTKALTFGDMNDPSSDIFHKVKNNPVYRTKTALGTEPNLYHIP
                     FGKGEHR"
     gene            complement(16586..17242)
                     /gene="nrfB"
                     /locus_tag="PXD18_001402"
     CDS             complement(16586..17242)
                     /gene="nrfB"
                     /locus_tag="PXD18_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase pentaheme
                     subunit"
                     /protein_id="HDL6301837.1"
                     /translation="MKKLISKAGRAVALIQAVVFAGFFAISSANALMPEQPKPLWQSE
                     TADDAKVAQDARRDPNKYCTQCHESANATGKPFHHAGKHFQKDVKSPNNGEPLTCISC
                     HGNISESHRKGAKDVMRFNPHGKASNPSLERSVNEQNQVCFACHTAEKLREKFWAHDT
                     HATKIACTNCHEIHPEKDPMKDIPEKDRIKLCTDCHTKIHSGEFKNPEMKATEAKGTK
                     "
     gene            complement(17261..18763)
                     /gene="nrfA"
                     /locus_tag="PXD18_001403"
     CDS             complement(17261..18763)
                     /gene="nrfA"
                     /locus_tag="PXD18_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming nitrite reductase cytochrome
                     c552 subunit"
                     /protein_id="HDL6301838.1"
                     /translation="MKFLIKSLAVATISILGCLQTALAEEAKTESLTDKAVKHEKLGV
                     KIESANHLFAEKYPLQYDSWKSTAKSTDRGSALEADPRYVILWAGYAFAKDYNKPRGH
                     FYAVTDVRDILRTGAPKDENDGPQPMACWTCKGPDVPRLIEEKGERGYFDPKWAKYGA
                     EIVNSIGCADCHDTTSEEFKQGKPALRVARPHVLRALNTVGWKFEDLDKHGKRPAVCA
                     NCHVEYYFKNKTDVTFPWDKGVDVDSIEKYYDEINFTDWTHALSKAPMLKTQHPDFEV
                     WSQGTHGKNGVTCIDCHMPKVKDKDGKVYTDHKIGNPFDQFEATCKTCHEQSKETLEK
                     RVKEYKHEVKEAMIRLEDQLVKAHFEAKAAWEAGATQEEMKEILMAIRHAQWRWDYSA
                     AGHGNHFHAPDVMLRTIATGIDRAADARAKLGVVLAKHGVTTPVAIPDISTKEKAQLA
                     IGLDIPKEQAAKDEFLKTVVPQWEKEARAKGLLPAEEADKPVAAPKAEAK"
BASE COUNT         5518 a         4141 c         3779 g         5330 t
ORIGIN      
        1 taagggctat ccattactaa atggcatggc cctttattta ctcctcaaca atgtaaatta
       61 cccatcaaaa caaactctgc tgcccaagca aattctccgg cacaggtttg atttgaaatc
      121 ctttttccgc caaaaagcct tttagggttt gaatattata aaaggcgtgg cttttagtgg
      181 tgttttcaaa gtagagatag agcctgtcaa attccgttct gcggctaaaa agcaattctg
      241 ccaagccttt taattcctcg tctgaatagc ggtaatcgtg gcgttctgcc gcactctgcc
      301 ctttccacca attcgggtta cgaccatgta agcgtaaata agcagtacgt tggttggcaa
      361 aaaagtgaaa tgccggtaag ccgatatttt gtgggtaatc cacattacac caaatcagat
      421 tagagctttt cgcaaaggta tcaaacaccg ccggaatatg ccagcttggg tggcgaaatt
      481 caatcgctaa cggataatcc gcaaaccatt ggcacaactc ggcaaggtaa cggcggttaa
      541 gtggcatacg ttcaaattga gttgggaact gaacaaataa atttgccaat aacccttcag
      601 cggtgaacgg agctaacgca ttaagaaata attgtgcttg atctaaagtc gccgtgcgtt
      661 gatggctgaa atcttgatgc agtttcaccg aaaaattcag ccgaccttcc gctttctgca
      721 ccattccttc aaaggctttc tgcccgatgg gggcgtggaa tgtgctgtta atttccagcg
      781 tgtcgtaatg ttggctatag acaaagagaa aatcctcttt tgcagtgccg aatgggtaaa
      841 gcgtgccgat taaatctgtg tcggcatagc cgccggtgcc aatataaata tgagggagca
      901 ttgtgtttat tctttcaatt ttttgcaaat tttaatggtt ttttaaccgc ttgcaaactg
      961 agaataaaag agtaagattt ggctatcttt tcttatttca tcatcattat gtggatttgg
     1021 tttactctgc tggcagccgt ggctcaagcc ggtcgcaatg cctttcaaaa gcaattaagc
     1081 gtcaatgtgc ctgtattggg ggtaacgctc gcccgctttt tctatgctgt gccgttggca
     1141 agcggttatc tctatttttt ataccaatat gacgataacc tcaacattcc ccattttcca
     1201 ccgctgtttt ttgtatatgc tatcggggct gggttggctc aaattctggc aacttcgcta
     1261 atggtgcaac tttttcactt aaaaaattat gcaataggtg tcgggctggc gaaaagcgag
     1321 gcagtatggg cggctttact gggcgtgtta ttttttggtg taaccatcag tggcattggc
     1381 tggcttggcg tggtactagg tggagtggcg attttcttaa tgaccggcag cggtaatcta
     1441 cgccaacttt cgtggaaaac actctttctc ggcatagcca gcggtttatg tttcgccctc
     1501 acatcacttt gggtgcgaga ggcaagcctg caactcaaca gccactattt gctttcagcg
     1561 gcgtgggtac tttttagcgt gattagcttt gaggcagtga tattggttat atacctagct
     1621 cttctccaaa aagagacact gattaaattc tttcgttttc caaaattagg tatgttgacc
     1681 agcctgtttt catttctcgg ctcattcggt tggttcaatg caatgagcct gaaccacgtt
     1741 gcctttgtaa aaacgcttgg acaagtggaa attttcttta ttctcggtat ttcctatttt
     1801 gtgtttaaag aacggcttaa aattcaagat tttatagggc tgattttagt agtgattgcc
     1861 gcaatcttgg tggtgctggg ctagatcgga tttttacgtt ttttatctag ctttgtaggg
     1921 tgggcgtaag cccacgcaaa accaataaat catttatccg tgggcttacg cccaccctac
     1981 gatacctaaa aaaattaaat ttcacatctt agtaataaaa tgaactataa aaatcctcat
     2041 agtatccttg tggtgattta tgctaaaaat acccaacgag tattgatgct acaacgcaag
     2101 gacgatcctg atttttggca atcggtgacc ggttcgatca atattggaga aacaccgctg
     2161 gaagcagcag aacgggaagt gagcgaagaa accggtttgc aaacttttga gcaaaaacaa
     2221 ccgcttgttg attgccaaaa gcagatagaa tttgaaattt tcccgcattt tcggtataaa
     2281 tacgcaccta atatcacaca ttgtgtcgaa cattggtttt tgctgccact tgatagtgag
     2341 caagagccta ttttaaccga acatttggca tatcgttggg tttcagtgga agatgcggtt
     2401 cgactgacta aatctcccaa caatgcccaa gcaatacaag aatatttaac atcaaaataa
     2461 ggaaacaaca gaatggcagg ccatagtaag tgggcaaata ttaaacaccg taaagcggca
     2521 caagatgcac aacgcggtaa aatttttact aaattaattc gtgaattggt gactgccgcc
     2581 aaactcggcg gtggtgatac ctcttccaac cctcgtttgc gtgcggcggt ggataaagcg
     2641 ttatccagca atatgacccg tgataccatc aaccgtgcaa tcgagcgtgg tgtaggcggt
     2701 ggcgatgata ccaatatgga aaccaaaatc tacgaaggtt acggcccggg tggtacagca
     2761 gtgatggtgg aatgtttaag tgataacgct aaccgtacga tttcccaagt tcgtccaagt
     2821 ttcacaaaat gtggcggtaa cctaggtact gagggttcgg taggttattt atttagcaaa
     2881 aaaggcttaa ttttagtggc aaatgccgat gaagatgcct taactgaagc tgctattgag
     2941 gccggtgcgg acgatattca accacaagaa gatggtagct ttgaaattta taccgcttgg
     3001 gaagatttag gctcagtgaa agacggcatt gaggctgcag gctttaaaat tgagaatgca
     3061 gaagtaacaa tgattccatc aactaccgtt gaacttgacg cagaaactgc accaaaactt
     3121 cttgatttaa tcaaccgcct tgaagattgt gatgatgtac aaaacgttta tcacaatggt
     3181 gaaatcagtg acgaagtcgc tgcattactg taataaaaaa atcacgcaaa ataagcataa
     3241 tttaggttat gcttattttt tatgaacttt tttcctatat tactgactaa cctaatgtag
     3301 tttatatgct actactttac tataacattt taaggagagt ctatgaaatt agtgaaattt
     3361 gtccctgccc tagcagcaac tttagtatta gccgcttgct ctaatgcaaa cacacaatct
     3421 gctcctcagc aagctcagga cgctgtgact aaagtggctg aacaagcaac acagcaagtg
     3481 aatgaaattg caggtaatgc acctcgtgca agtggtgcag taaaagtaga aaaagcaact
     3541 gatggtgcaa aatcaattgt atatcgttgc caaagtggta aacgtgtaac tgcgaattat
     3601 gtcttccaag gagaagaggc aaaagcagta aatctattag tccaaagcgg cggtaaaaca
     3661 caaaagatcc caacattaac tcgtgatgcc tcaaaccaag attctacttc attcaaaacg
     3721 gataaatatt cttgggattt agacacaggc tttaccttat catctaatgg ccagtcaggt
     3781 atgctaacca agtatggtgc taaaacagat accatcgttg ctaaattatg tgatgtagat
     3841 aaagcattaa cctcaaaatt aaataaataa tctttcttga ttttactact cataagcgag
     3901 aagataatat cttctcgctt attttattgc acaaagatgg ctattatttt aggaattgac
     3961 cccggctcaa gggtaacagg ttacggtgtg attcgccaaa acgggcgaca gctggaatat
     4021 ttaggaagtg gggctattcg aaccacggct gaagatctgc ctacccgctt aaaacggatt
     4081 tatgcaggcg tgagtgaaat catcactcaa tttcaaccaa atatgttcgc catagagcag
     4141 gtatttatgg caaaaaaccc tgattctgcc ttaaagctcg ggcaggctcg aggaacagcg
     4201 attgtagcag cggttaatca cgatttacct gtgtttgaat atgccgcccg attagtcaaa
     4261 caaaccgtta cgggaattgg ttctgctgat aaagtacaag tgcaagatat ggtaacccgt
     4321 atgcttaaac tctccgccaa accacaagcc gatgcggctg atgcattagc cattgcgatt
     4381 acccacgctc attcaatcca acattcactg attgttgcta agcaaagcca gcagaatgtg
     4441 agtagtgaga aagagcaaat tttagcacta atgaaaaccc gttatagccg gggaaggttt
     4501 aggttaaaag gctaactcaa tataaaatga ccgcttggaa ctaatgtttc aagcggtcat
     4561 tttttgagaa aattttacaa ttactcgcct tcaaaaggag ctgagaaacg ttcaattctc
     4621 gccccaatct gacgtaattt ttcttcgatg tgttcatagc cacggtctat gtggtaaatt
     4681 ctatccacaa tcgtttcacc cgttgcaata cagcctgcca acactaagct gatggaagca
     4741 cgcaagtcag ttgccattac ttctgctgat tttaactgct ctacaccata gcaaattgca
     4801 atattacctt caatttccgc tttggcaccc atacgaatca gctcaggaat atgcataaaa
     4861 cggttttcaa aaatcgtttc tgtaatacgg cttgtgcctt ctgcaactgt atttaataag
     4921 gtaaattgag cttgcatatc agttgggaaa cctgggtgtg gcatagtgcg aatgttcact
     4981 gctttcgggc gacgacctag agaatcaagc gtgatagtat tttccgtcac atcaacctgc
     5041 attccagctt cacgtaattt ttcgatcact gcatcaagag tgtctgcttt ggtgttacgg
     5101 caagtaattc gaccaccgga aatagccgct gccactaaaa atgtaccggt ttcaatacga
     5161 tccggcacta cgctgtgttc gcaaccgcct aaatgctcaa ccccttcaat ggtaatcata
     5221 tcggtacctg caccagaaat tttagctccc atcgcattta agaaatcggc agtatctaca
     5281 atttcaggct cacgagcagc attttcaata acagtagtac cttttgctag agtacctgcc
     5341 atcatcaccg ataaagttgc tcctacgctc actttatcca tatagattct tgcaccgttt
     5401 aaacgaccgt ttgaagttgc tttgacatag ccttcatcaa gctcgatttt cgcccccatt
     5461 ttttcaagac cggaaatgtg catatctacc ggtcttgccc cgatagtaca accgcccggt
     5521 aaagaaactt gcccaagttg gaaccgggca actaatggag ctaacgccca aattgaagca
     5581 cgcattgttt tcactaattc gtaaggtgca acgtaattat tgatcttact cgcatcaata
     5641 tgtaccacgc ctttatcgct acctttttca accgttaccc ctaattggcg taagatttta
     5701 aaagtggtgt ccacatcttt taaatcaggc acatttttta acgtaactgt tttttcagcc
     5761 aaaatagcgg caaataaaat agggagtgcg gcatttttcg cacctgaaat atcgacagta
     5821 ccatttaaag aaaatggacc atacacacga aatttttcca tttgggagat cctaaaaaat
     5881 aataatttgt aggggcgaaa aatttttcgc ccaattttcc aacgtttaca aaagagtttg
     5941 ggcgaatagt gattcgcccc tacatttcat ctatccaacc atatttagca aacgctcagt
     6001 tttccatttt tccacgctga atactttaat ggttaaagcg tgaatcgcat tagtagtgaa
     6061 atactcagct aaaggggcat aaacagcttg ctgttgtttt acttttgaaa gagaagcaat
     6121 gctgtcactt actacaataa cgccaaagtg ggcattctcg ccttgagcgt ggacttctgt
     6181 tgcatcagat aatgcttgtt ttaaaatttc ttcaatttgt gatggattca ttctgacttc
     6241 ctaaaatatg attggtaact cactcaaata ataaattgct caaaccaacc gtctaaatcg
     6301 tataatgcag ccaaagttct gacagaatct ggcgtattaa tcaaactgtt tggtatgatt
     6361 ttatggtaat gattcagtaa ttcagcaagt aaggtaaaac cggcagaatc aatccgagtg
     6421 atttctttta aatcccaata taggctttgt ttccctgttg gagataaaaa agaagcacgt
     6481 tgcttccata aagggagcaa cgtgttacga gttaattcgc ctgatagttt cacaaaaaga
     6541 ctttcgttat tttgctgaat gtcccattgt aatgtttttt gaggcataac taaactactt
     6601 attttaaagt gataggctgt tttgcagatt gtgccacttg tgcaattaag gcatcaatcc
     6661 ctttttgacg aatcacaccc gcccattcgt tttgcttggt tgcaaccata cttactcctt
     6721 cagcggccat atcgtatgct tgccattcac ctgttttgct gtttttacgc catttaaaat
     6781 ctaatttgat cggctgtgca gcacctttac ctgacacgtt tacacgaatg cttacgatag
     6841 atttaccatc caccgatttc gggctttcaa tttgcacact ttgatcttga tactgggtta
     6901 acacctgagc ataagactgc tcaacaaatt gaccaaaagc attaaagaat gcctcttttt
     6961 gtgcatcagt cgcagccgat aagtttttcc ctaacactaa ttggcctgca tatttcacgt
     7021 gaacgtgtgg cattaaatcg ttacgcacaa tggtacgcaa atattcaggg tttgatttaa
     7081 ttttcgcttg atttgcttta atatcgccaa ataatttatc tgcggtttgt tgcattaata
     7141 cataagggct agtttcagca aatgcggtgg ttgaaaataa tgcagaaact gccactaagc
     7201 ctgttacgat aattttttta atgtttttta acattattga tgctctccaa aactctaaat
     7261 tagaggttgt tgtacttaat tactctgctt ttggttcagc agaatcactt gctttttcat
     7321 cttcagtttt atctgacttt ttatcaccat ataagaactg accgattaaa tcttctaaca
     7381 ccattgcaga attggtatct acaaaagtat caccttcttt catcattgca gtttcacctt
     7441 cgattacgaa gccaacattt aacgcaacgt attgctcgcc taataagcct gaggttttaa
     7501 ttgagagcga gctggtatcg ggaatttgat taaaactttc atttaccgct aatgccactt
     7561 tcggggtgta ggttttgtta tcaagtgaaa tatcagccac tcggccaact accacaccgc
     7621 caactttaat aggcgcacga acctttagtc caccaatatt atcaaaagtt gcatacaggg
     7681 tgtaagtttt ctcatttgag aagccctgca catttgctac tcttaagcct aaaaagacaa
     7741 gagctgcaag cccaagtagt acaaataagc ctacccaaaa ttcatattta attgattgac
     7801 gcattgtctg ttcctttcaa aaaatcaacc gccgaacatt atcgcagtta aaataaaatc
     7861 caatcctaaa atcaccagtg aagcatttac caccgttctt gtggtcgctt ggctgattcc
     7921 ttctgaagtc ggtacgcaat cgtagccgtt aaataaggca atccagacca ccgcaaaggc
     7981 aaaaatcaca cttttaataa agccgttaat taaatcgctg gtatttaccg agttttgcat
     8041 taccgaccaa aaactgccac catcaacgcc tttccaatct accccgacta atgagccgcc
     8101 ccaaattccg atagcggtaa aaatagcagc taacaccggc attgaaatca cgcctgccca
     8161 aaagcgagga gcgatgatac gtctaagcgg atcaaccgcc atcatttcaa gactggaaag
     8221 ttgctctgtg gctttcatca gcccgatttc tgcggtcaat gccgaaccgg ctcgccctgc
     8281 aaataataat gcagtaacta caggaccaag ttctcgtaaa agcgagagtg aaaccaaagt
     8341 tcccaagcta ctttcggcgg caaaatcgac caataccaca tagccttgta agcctaacac
     8401 cattccgata aataagcccg acagcataat aattaagagc gattgcactc ctaacacata
     8461 aagctgttta atcagtaacg gggtatgttt tctaaattca ggtttaccga ttaatgctcc
     8521 ccataacata aaagcggaac gccctaatgt acggataaaa ttaatcacca ccgccccgat
     8581 agagctaata aaattaacca ttaaatagct cctccgtata atcttttgct ggataatgga
     8641 accgcaccgg accatcagct ttaccggcta agaattgtac cacttgcgga tcttcgcttg
     8701 cctgtaaaat ttccggtgta ccttcagcaa tcactcgttt atctgccaca atataagcat
     8761 aatcggcaat acttaatact tctttcacat cgtgagacac cacaatggag gtcaaattca
     8821 atgcctgatt taactcttta atcagctcga caatcacacc catactaatc ggatcttgcc
     8881 cggtaaacgg ctcatcatac ataatcagat ccggatctaa cgcaatcgct cgagcaaggg
     8941 cggcacgtct tgccataccg ccggaaagtt cggacggcat taaatttgcc gcacctcgca
     9001 acccaaccgc ctcgagcttc aataacacca atttgcgaat tagctcttcg ggtaaacggg
     9061 tatgctcccg aatcgggaaa gccacattat cgaaggtaga aatatcggta aataacgccc
     9121 ccgattgaaa caacatcccc attcgttggc gaatttcata caactctttg ttattggctt
     9181 tgcaaatatc tctgccatca aataaaattt cgcccgattc aggtaaaatc tgcccaccga
     9241 ttagcctcaa cagggtggtt ttaccaatcc cagaaggccc cataatggca gtcactttac
     9301 ctttctgcac ttgcagattc aggttatcgt aaatcactcg ctcccctcgc ttgaaggtca
     9361 agttttttac ttcaaccaaa ttttccgttt ttgtcatcaa ataggactca aattaataaa
     9421 agtgatattt atggtctatc aaatttgcca gaatgtcaaa aaacttttaa taatctgaca
     9481 aaaatctgcc tttacaagcg gtcagatttg ctaaattttt tgcaaaccgg ctgaactgaa
     9541 aaagaaaggt cttgtcttag ccaatacgag cgttttcact cgtagattat aaaaacatag
     9601 gatatgagga acattcacaa tatgaacaaa acaatgaaaa aatcattttt aactgcattc
     9661 attttaggct caaccattgc cgcaatgccg gcgtatgcag aagcaacatt acccacagcc
     9721 gtaaatgggc aagctgtgcc aagccttgca ccaatgctgg aaaaagttcg cccggcggtg
     9781 gtgagtattg cagtagaagg taaaaccaaa ggcgatagcc gccgcagtcg tgaaattccg
     9841 gaagaatttg aatttttctt cggtcctcac gccgatttat tcggcaaccg ctcatcagct
     9901 ccacgcaatt tccgtggcgt tggatcaggt gcagtcatca atgccgaaaa aggttatgtg
     9961 attaccaata accacgtgat cgacaatgcc gataaaatta ccgtaaaact tgaagacgga
    10021 cgtgaattta aagctaaatt agttggtgct gatccccttt cagatgtggc gttaattcaa
    10081 gttgaagatc caaaaaactt aactgaaatt aaattcgccg attccgataa attacaagtg
    10141 ggcgatttta cagttgcaat cggtaacccg tttggcttag gacaaactgt tacttcaggc
    10201 atcatctcgg cacttggtcg ttcaaccggt caatccgatg aaggctatga aaactatatt
    10261 caaaccgatg cggcagttaa ccaaggtaac tctggcggcc cgttaattaa cttaaacggc
    10321 gaattaatcg gaattaacac cgctattatt tctccaagtg gtggcaatgc cggtatcgcc
    10381 tttgcgattc caagtaatat ggcaaacagc ttggtgactc aaattattga gtttggtgaa
    10441 gtaaaacgtg gaatgttagg cattaaaggc ggtgaattga atgctgacct tgctaaagag
    10501 ttcaatattt ccacccaaca aggggcattt gtaagcgaag tcttaccgga ttctgctgct
    10561 gctaaagccg gctttaaagc aggtgatgtg attactgaaa tcaacggtca aaaaatccgt
    10621 agtttcagcg aattacgagc aaaagtagct acttcaggtg taggtaaaga gattgaactt
    10681 acttacctgc gtgacggcaa agaagccaaa gcaaaagtga ccttacaatc ggattctgaa
    10741 gccaaagtta ctgcttcaaa cctcattccg gcattaaaag gggcagattt taacaactac
    10801 aatgccaaag gcattaaagg ggttgaaatt tctaacgtag aaaaaggctc gattgctgaa
    10861 atgcgaagcc tcaaaaaagg cgatattatc atcggcgtga accgccactc ggtagaaaac
    10921 attgccgatt tacgcaaaat attagaaacc aagccatctg tggttgcact caatattgtg
    10981 cgtgacggtg caaatttcta tgtgattttg caataaacct tttgatccac tcaaacaaaa
    11041 gccgatgaca aaaatcatcg gcttttgtta ttgctgggaa tttaacatct gtcgtgccat
    11101 ttccatactt tggataatcg ctctgcggtt gatagaatca ttattgctat ctaacacttt
    11161 acgccaatta tcgagagctt gttgaaaatt gttatttaaa aagctgtcgg aggctagcag
    11221 gagtaaactg gcattttcat ttttatccaa ctgtagggct tgctcgataa tggcttgaat
    11281 ttcaacggtc attttctgcc cgttatcgta ataacgagcg gtggcaatcg cccccaaaat
    11341 agccgctcgt tttccgagta gcttctcggc attatcgtag caaaccagtg ccgaatcaaa
    11401 atcattgctt aacgcataag cctgccctag ttcgtaccat aaatcaccgt tattcgggtt
    11461 ttctcgaagc tggttttgca gactcaaaat atagcgttca tttttcgatg tgccgtgtgc
    11521 atcgctcatc tgttgttgaa aatcttgatg ttgttgcaaa cctgattgca ccacttgata
    11581 acgtccggaa agcccatagt aagtcattgc taacaacaaa atcgccacgc aactcaggct
    11641 tgcgatttta gcaagcggtc gattttgagc attattttgc aaaacgctct gttcaaattg
    11701 cgttcgttca aattggtaac gttgctctgc ctcacgctca aactcttgtc tgacgtcatc
    11761 tgcaaaatgt tgggcaaatt taaccgcttg ttggtagttt tcttggctta attgctcacg
    11821 cgttttcatt tttgttgcct ttatttttgc gagttcgcca caaaatagct agaaataaca
    11881 ggctaaacaa gccaaccggc aagccccata atacccatgt ctgtggcgtg aatggtggat
    11941 cgtaattcac aaaactgccg aaacgctcgg tcataatgcg gataatttcc tcattacttt
    12001 tcccttgatt caccatttca tacacttcaa ttcgcatatt gtaagccgcc gtcgcattgg
    12061 attcgaccaa attttggttc tgacattgca aacatcgcaa cgaacgagcc agtgaaatcg
    12121 cccgtacccg atccgcctca ttttgaaatt gaaaggtgtc caccatttca gcttgaaccg
    12181 tgccgacaaa tagcaacaag ccaaatacaa gcggtaatat tttgcggatt ttttgcaaaa
    12241 agccgatgga aattatgcta tttctcattt ctgagagcct ctaatttggg taggaaatcc
    12301 tgtgcaaaat cagggttgta acccttttgt tggtaacgca ctacaccgtg tttatcaatc
    12361 aaataactgg aaggtgcaga agagactttc agggtttgga tcaaaaagcc tttttcgtaa
    12421 tcatcaataa ttaaactaaa cggatttccc cagtttttca atgcgttgag ggcatcattt
    12481 gggcggtcgc tataagttaa gccgacaatc ggcacgcctt tttgttttag ttccaacaaa
    12541 atcgggaact ctttaatgca ccaagtacac cagctcaccc acacattgag aatataaggc
    12601 tctttcggca agctgttgtt atttaaatgc gcgttactat caagtaagtt cttgcctaca
    12661 aactctggaa acggcttgcc ctgccaatct tcagtgggag caagggcatc tttattcatt
    12721 aacggcacag tcaaaaagcc aacaataact acaagtaaca ggagcggaat aagtaacagg
    12781 atttttttca ttttttgttt tctctacgat aaccgaataa tgccaacagg gcggccatta
    12841 ccatcatcat accacctaac cataaggctt gcacataagg cttatagtgc aaacggaagg
    12901 catattctaa attgccgaac ttatccccca tcacaatata aatatcgtct aaattgtggt
    12961 ggaaaagccc tacttctgcc attgtcatcg ttcttacatc ataatagcgt ctttccggtg
    13021 tgacggttgc cagcaactgt tcatctcggc tgatagaaaa aacggcttgc tcggcggtgt
    13081 agttcggacc gatgagatcg tgataatctt catatttaaa ggtataaccg gcaagttccg
    13141 ctgcttgatt cggctttaac cgcacgccga tttcatcgcc gtaataactg ttcatcattg
    13201 ccccaatcac gcaaaccgca aagccgatat gggctaaccg catcgcaagc ggtcgaattt
    13261 gccacatttt ttgcgaatag ggcaaatgag tgagaataat ccagatcgca aggctgataa
    13321 atatggtggg taacggctgc aaagcaaaat gctctctttg cgagatggag gcataaatca
    13381 accctaacgc taaaccgact gcaatcggca gcaaccaaag ttttaccaat atctgcttat
    13441 ttgaaatctg tttccagccc agcaccaccg caaagcccat tactatcatt aacagtaacg
    13501 ctagtggcgt gaatacgcta ttgaaatagg gggcccccac tgaaatcgat ccccaattca
    13561 tcactgtgaa gatcatcggg tagaaagtcc ccagcaatac cacagaagca gccacactaa
    13621 ataagccgtt aatcaataaa aatgccgttt ctttagaaag taagttgaaa cgcactttgc
    13681 cttgccagag attcgctcgg aatgcaaaca gagcaagggc aatgaaactt aagccgaaga
    13741 ataagatcag cagtgccatt cctctgtcgg gatcgaccgc aaaggcatga accgaggtca
    13801 gtacacccga acgaacaata aacgtgccta ataggcttaa agcaaaggcg aaaatggcaa
    13861 gtagaatcgt ccaataatag aaaatgccac gctgttggct cacaattaaa ctatgcacca
    13921 atgcggtgcc aagtagccaa ggcattaggg aggcattttc caccggatcc caaaaccacc
    13981 agccacccca gccgagttcg taatatgccc accacgcccc taaaataatg ccggcggtga
    14041 gaaatcccca cgaaatcatc gtccacggac gaagccaacg cataatcgca gcgtccattc
    14101 cgcctgaaac gagggcggcg acaatcattg caaagctcac cgcaaagccg acatagccca
    14161 agtagagcaa aggcgggtga aagatgagcc caatatcttg caacattggg ttgagatctc
    14221 gcccttcagg tggtggtgga aagccacgtt caaatgggct ggaaaccaat agaatgaaaa
    14281 gtagaaaacc tagtgcaatt agccctaaca tcgctaaggt tcggttggca aacaagcggt
    14341 caattttttg cgaaaatttg caaaataccg cagaccaaat cacaagagcg gtgagccaaa
    14401 acagcattga gccttcgtgt ccgccccaag tggcggcaaa tttaaaaaaa tcggggagct
    14461 ggctgttgga atgagcggca acgtagataa ccgaaaaatc atcggttaga aaagcataag
    14521 ctaaggtaga aaaggaaaat gtggtaaaag cagcttgcaa ataagtgaaa agcggagcca
    14581 atgccagcca atgatattgc ttgcgaactt cgcctagaag tgcaaaacca acttgaaaaa
    14641 tggcactaat tgcagccaat aaaagtgaaa aatagccgag ttccggtagc ataaaaaatc
    14701 caaaaaatga ccgcttgtga atgtaaaaaa agccctctcc acttgtggga gagggacaga
    14761 tttttcttcg ttcagaagaa aaatcaggga gaggggaatt aaataatttt gctaaaaata
    14821 acaatactcc ctctctctga aaaatatttc tgaacgaaat atttttcggt ctcaatactc
    14881 gctacgctcg ctccttcgga gccgttggca aagccaacgt tcaaatgtaa acatttgtcc
    14941 cacaagggga gagagtatat cctaacttgc aaccgttagt tgccctgcat aaaggataaa
    15001 gtaacgcaag cagagtacac cgattaagtc gaaaacggaa attaagataa taaatttcac
    15061 gttatgtttc aagcggtggc taccaaaaat attggcaaca agcggaatcg caataccgat
    15121 taacattacg cctatccaga acacattccc ccagaagccg ttaagtgcat gggttaaagc
    15181 gagcgattta tctgctccac cgaagtgtaa gcccacaaag aacgctacaa ttaagcctaa
    15241 ttcggttacc ataatcggca cttcaaattt gtgcataaag tggacttcgt ggctttcacc
    15301 ggataacttg cctgcgagta aaatcactag gaaagttgct gcaatacctg acgatgcccc
    15361 tgatgccaag aacaatgccg gtaacacagg gttattcagc attggataac tcactaacgc
    15421 cgagagtaag aaaccggtgt aagcaccaag tacagcagcc aatacgaata agataaattc
    15481 aattggtttt aacagcttcg cttcggcaaa atcgatcaaa ccagagacca caggtagata
    15541 ccgaacaatc caatctttaa acattatggc gatccaaacc accaatactg ccatataaag
    15601 ttggaataac attaccccca tcgacattac tgaggtaaag ttatagttga acattaattt
    15661 ccagaatgtc caaggtttgg ttaagtggaa aatcagtaac agtaagccga taatggttgg
    15721 taatgtgcca agaatagccg cactacgaat aatccagttt tggcttggtt tttccatttt
    15781 gacaccgcta ttacggtaag caatcgctaa ctgaaccgca cctgatgaaa taccaagtag
    15841 gaataagtaa atagcgatag tgccatccca aacaaggttt ggggtttgga aaggtacata
    15901 ttcattcatt atctatgttc tcctttacca aatggaatgt gatataaatt cggctccgtg
    15961 cctaatgccg ttttggtgcg ataaaccgga ttatttttca ctttatggaa aatatcgcta
    16021 cttggatcat tcatatcacc aaaggttaaa gctttagtcg gacaagcctc tacacaagca
    16081 ggctgtttgc cttctgcaag attggtatct cggcaaaagt tacatttatc cgccgatttt
    16141 ttctcagggt gaataaaacg tacacgatac gggcaaaccg caatacagta ttggcaaccg
    16201 acacacaaat ctgagtgtac atcaataatc ccggtttcag gatcgataaa tgaagcaccg
    16261 gtcgggcaaa cactcacaca aggtgcattg gtacagtgtt ggcaagattg gcggaaaaac
    16321 tcatattgta cgttcggaaa ctcaccgaaa ggctcactac ggataatttc taaacgagaa
    16381 accccttccg gcactttgtt ggtggtgcga caagcgtcca tacaagccgt acagccgata
    16441 caggcagttt catcatgaac catcgcatag cggattttct tttgttcttt ctcagtagca
    16501 agagttatgg aggtggcaag ccctgtactt gccacaactg cgatagcacc tgcccctgag
    16561 acgaaatctc tacgggtgca agtcattatt ttgttccttt tgcttctgtg gctttcattt
    16621 caggattttt aaattcgcct gaatgaattt tggtatgaca atccgtacaa agtttaatgc
    16681 gatctttttc aggaatgtct ttcatcggat ctttttccgg gtgaatttca tgacagttgg
    16741 tacaagcaat tttagttgcg tgcgtgtcgt gagcccagaa tttttcacgc aatttctctg
    16801 ccgtatggca agcaaaacag acttgatttt gctcatttac cgaacgttca agtgatgggt
    16861 tacttgcttt accgtgtggg ttaaaacgca ttacgtcttt tgcccctttg cggtggcttt
    16921 cagaaatatt accgtggcaa cttatacaag tgagtggctc tccattattc gggcttttca
    16981 catctttttg gaaatgtttg cctgcgtgat ggaaaggctt acctgttgcg tttgccgatt
    17041 cgtgacattg agtacaatat ttatttggat cacggcgtgc atcttgagct acttttgcat
    17101 catcagccgt ttctgattgc caaagaggtt ttggctgctc aggcattaac gcattcgcac
    17161 tggaaattgc aaaaaaacct gcaaatacga ccgcttgtat gagggcgact gctcgtcctg
    17221 cttttgagat taattttttc atagttcacc tcaagctaca ttattttgct tctgcttttg
    17281 gtgctgctac cggtttgtct gcttcttctg cgggtaataa acctttagca cgagcttctt
    17341 tttcccattg aggaaccaca gtttttaaga actcatcttt tgctgcttgc tctttaggaa
    17401 tatctaaacc aatagcaagt tgtgctttct ctttagttga gatgtccgga atcgccactg
    17461 gcgttgttac accgtgtttc gctaacacta cacctaattt agcacgggca tctgctgcac
    17521 ggtcgatacc tgttgcgatg gtacgtaaca ttacatcagg tgcgtggaag tggttaccgt
    17581 gacctgccgc agagtaatcc caacgccatt gagcgtgacg aattgccatt aagatctctt
    17641 tcatctcttc ttgagttgct ccagcttccc aagcagcttt cgcttcaaag tgagctttca
    17701 ctaattgatc ttctaagcga atcattgcct cttttacttc gtgtttatac tcttttacac
    17761 gtttttccaa tgtttctttg ctttgttcat gacaagtttt acaagtcgct tcaaattggt
    17821 caaacggatt accgattttg tggtcagtat aaactttgcc gtctttgtct ttcacttttg
    17881 gcatatggca atcaatacag gttacaccat ttttcccatg tgtaccttgt gaccaaactt
    17941 caaaatctgg gtgctgcgtt tttagcatcg gagctttcga taaagcatga gtccagtctg
    18001 taaaattgat ttcatcgtag tatttttcaa tgctatctac atctacacct ttatcccaag
    18061 ggaaagttac atctgtttta tttttgaaat agtactccac atggcagtta gcgcacacag
    18121 cagggcgttt accatgttta tctaaatcct caaacttcca accaaccgta ttcaatgcac
    18181 gtaatacgtg aggacgtgca acacgtagtg caggtttacc ttgtttaaac tcttctgatg
    18241 tcgtgtcatg gcagtctgca caacctattg agtttacaat ttcagcacca tatttcgccc
    18301 atttaggatc aaaatatcct cgctcacctt tctcctcaat taagcgtgga acatcagggc
    18361 ctttacatgt ccaacaagcc ataggttgtg gaccatcatt ttcatcttta ggcgcgccgg
    18421 tgcgcaaaat atcacgcaca tcggtaactg cataaaagtg acctcgtggt ttattataat
    18481 ctttcgcaaa agcatagcct gcccacaaaa taacataacg agggtcagcc tctaacgcac
    18541 ttcctcgatc tgtggatttt gcagttgact tccaagaatc gtattgtagc ggatattttt
    18601 ctgcaaatag gtggtttgca gactcaattt tcacgcctaa tttttcatgc ttaactgctt
    18661 tatctgttaa tgattcagtt ttcgcctctt cagctaaagc agtttgtaaa caccccaata
    18721 ttgaaattgt tgccacagct aggcttttta ttaaaaattt cattttgg
//
LOCUS       DANLXD010000050        18097 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.050, whole genome shotgun sequence.
ACCESSION   DANLXD010000050 DANLXD010000000
VERSION     DANLXD010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18097)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18097)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18097
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.050"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            85..1176
                     /gene="ulaG"
                     /locus_tag="PXD18_001404"
     CDS             85..1176
                     /gene="ulaG"
                     /locus_tag="PXD18_001404"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001863918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HDL6301839.1"
                     /translation="MSKIQEITRESWILSTFPEWGTWLNEEIEEEVVPEGNFAMWWLG
                     CVGVWIKTPAGANICMDLWCGRGKSTKKVKDMVRGHQMANMAGVRKLQPNLRAQPMVL
                     DPFAINEVDFILASHYHSDHIDVNVAAAICNNPKLDHVKFVGPWHCAELWKKWGVPEE
                     RIIVVKPGDVVKLKDVEIHALDSFDRTCLVTLPVEGAEERGGELAGLCPSDEEMGRKA
                     VNYVFKTPGGTIYHGADSHYSIQFAKHGKQFDIDVALNNYGENPVGIADKMTSVDLLR
                     MAECLRCKVIIPVHHDIWTNFMASTQEIIDLWRMRKDRLQYQFHPFIWEVGGKYVYPR
                     DKDLIEYHHPRGFDDCFEQEPNIQFKSML"
     gene            1260..2006
                     /gene="ulaR"
                     /locus_tag="PXD18_001405"
     CDS             1260..2006
                     /gene="ulaR"
                     /locus_tag="PXD18_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator UlaR"
                     /protein_id="HDL6301840.1"
                     /translation="MNESYRHKELLALLEERKALSTADIMQLLNISPATARRDISKLD
                     GQGKLKKVRNGAEAILAPTFLQHTKITNNAQEKRRIAEAAGRLCKDGESLILTCGSTM
                     EMLGEVLCGRKLQIITNYLPLANQLIAGCHDDVVIMGGQYNKHKKVMLSINTQNEMTY
                     AATTMFTSGKGLTSEGLFKTDMIIANAEQQMAKHAERYVVLLDSTKLGKKVGMLFKEF
                     DKIDLLITGKEADPTIIQALRNKGLDIILA"
     gene            2061..2921
                     /locus_tag="PXD18_001406"
     CDS             2061..2921
                     /locus_tag="PXD18_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase"
                     /protein_id="HDL6301841.1"
                     /translation="MRKHKLGIYEKALPKNISWQDRLSIAKVCGFDFVEMSIDETDER
                     LARLDWSKKERAKLVKTIINTGVTIPSMCLSGHRRFPFGSCDEATRQKAYEIMEKAIQ
                     LAVDLGIRTIQLAGYDVYYEEQDEGTIQRFQQGLEWAVELAASNQVTIAVEIMDTQFM
                     SSISRWKKWDEIIKSPWFTVYPDLGNLSAWNDNVAEELKLGIDKISAIHLKDTYKVTE
                     TCKGQFRDVPFGDGCVDFAACFKTLAELNYRGAFLIEMWTEKAEEPITEIINARRWIE
                     QKMQEGGFTL"
     gene            2918..3637
                     /locus_tag="PXD18_001407"
     CDS             2918..3637
                     /locus_tag="PXD18_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HDL6301842.1"
                     /translation="MTQLTELTPALQALRERVLKANLELPKYGLVTFTWGNVSEIDRE
                     TGLVAIKPSGVEYDAMTVEDIVLVDLQGNRVYGDKKPSSDTETHLELYRQFTDIGGVV
                     HTHSRNAVGWAQAGRDLLALGTTQGDYFYGAIPCTRKMTAEEIAGSYELETGKVIVET
                     FRTRGIEPKAVPGVLVHSHGPFTWGKDGHDAVHNSVVLEEVAYMNFISHQIRPQIGPM
                     QQELLDKHYLRKHGANAYYGQ"
     gene            3858..6335
                     /locus_tag="PXD18_001408"
     CDS             3858..6335
                     /locus_tag="PXD18_001408"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012311.1,HMM:TIGR02601.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDL6301843.1"
                     /translation="MYLLEGNQKVKNRNYFVAIATILALSPEVNATELSDQLASRTRY
                     YPSATDSYYSYYKYAPIYSGYYTSNSRNGYSSWYYPGSNAGVTTRTVSTTVNGITVTK
                     VYTTHNGRTTVRTTYAPAVNKPIVNKPTPIANKPVVDTPTQPVIDANPIMDPPVQPIV
                     DNKPITDTQPNPITDNKPVIESPIDDTRPVIIRPTTPVNLHPEPVAVGVPNVGIRWND
                     RSRGYNIDDPNNKQNVKLTGEGVKVGILDSGFKNYLMQDDILKKFGNRAVIIETGRTA
                     PASATHGIEVAEMVGGGNSRNGVASKSTLLLADITKTTNAGTGLSATAPIYYDLWNRG
                     ARIFNQSYGIPKPLTYFNNNRNSSYYYLHQFDGNVLQFYKDKVKEGGLFVWAAGNNRG
                     DLDPSLQAGLPHYEADLEKGWISVVAVATRTNQGLGNFEWSNLLPYSQAGVAKNWTVT
                     AMGDYIFNLGGRNIIASGSSFAAPAVTGTAALVKQKYPWMDGNLIKQSILSTATDIGA
                     PGVDDVYGWGLLNIEKATNGPARFGKRLALADNVTVNIPNGSYEFSNNINGDAGLVKN
                     GQGELILSGASTFEGDTTLNEGAVTINGKKYVSKVNVSPSGTLVVNNTTLENGVNNEG
                     TVVNQGYSTIKRAYVASAQSTLVSDLGSNLNVKGEVDLNGSTLSLAAVKEGKAQYVTQ
                     KGLSMSAITSDSAIKGNFAAIETSGLLTATAEKTNENEVKATVSRKNVATALESSFSA
                     LDNQIEGNNGSTNATNDEFAQQAATLQNSIANINTQSVVLDSLSGQIYASAQALTFEN
                     SETVNKDLSNRLVMLGTLDNVGETAGV"
     gene            6345..7160
                     /locus_tag="PXD18_001409"
     CDS             6345..7160
                     /locus_tag="PXD18_001409"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL6301844.1"
                     /translation="MYGNGTLKEIGFGEGKTNTYAGQIGFDKPVTDHVILGAALNYSK
                     AKVNFDRYGGSSKADGIGASLYARIGNKHKTPWYLQGRAGYGSVDSDVERHIILADNN
                     ASTAKINHRDRVFSAYVESGYDFKQGRFALTPFVGFSHDVVRRGAFSEQNSQFGLTAD
                     KATYKQTSGLIGLRTSLEVNLAGMKTTFQGYVNHQKAFNREDLSFKASYTGLQDAKFD
                     VKGIGLAKHKTWVGIGALAEVNKNTSLYVNYDLKLAKNSGHNNVVTAGIRINF"
     gene            complement(7247..8107)
                     /gene="pdxY"
                     /locus_tag="PXD18_001410"
     CDS             complement(7247..8107)
                     /gene="pdxY"
                     /locus_tag="PXD18_001410"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase PdxY"
                     /protein_id="HDL6301845.1"
                     /translation="MKNILSIQSHVVYGYAGNKASTFPMQLLGVDVWALNTVQFSNHT
                     QYGKWGGMVMPKEQIGSIVDGIHNIGELHRCDAVLSGYIGSAEQVAEIIQAFHKVKAE
                     NPNAIYVCDPVMGHPDKGCIVADGVKEGLINLAMAQADIITPNLVELRELTGLTVENF
                     EQAVEAVKVILTKGPKKVLVKHLSRVGKESNKFEMLFANQDGIWHISRPLYQFAKEPV
                     GVGDLTAGLFVANLLNGKSDLEAFEHTANAVNEVMEQTARSGLYELQIIASRDRIVNP
                     QCSYQAVKIA"
     gene            8226..8301
                     /locus_tag="PXD18_001411"
     tRNA            8226..8301
                     /locus_tag="PXD18_001411"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8259..8261,aa:Thr,seq:tgt)
     gene            complement(8396..9349)
                     /gene="accA"
                     /locus_tag="PXD18_001412"
     CDS             complement(8396..9349)
                     /gene="accA"
                     /locus_tag="PXD18_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HDL6301846.1"
                     /translation="MSQEFLDFELPIAELEAKIESLRAVSEQDDKINLDDEIKRLQKK
                     SEELTKKTFANLDAWQISRMARHPNRPYTLDYIEHIFTEFDELAGDRAFADDKAIVGG
                     IARLDGRPVMVIGHQKGRTVKEKVKRNFGMPAPEGYRKALRLMEMAERFNMPIITFID
                     TPGAYPGIGAEERGQSEAIARNLREMSQLSVPVICTVIGEGGSGGALAIGVGDKVNML
                     QYSTYSVISPEGCASILWKSADKASTAAEVMGLTAPRLKELELIDNIVPEPLGGAHRN
                     VEQIAQNLKQRIVEDLAGLDQLNKEDLLERRYQRLMNYGYV"
     gene            complement(9403..10827)
                     /locus_tag="PXD18_001413"
     CDS             complement(9403..10827)
                     /locus_tag="PXD18_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HDL6301847.1"
                     /translation="MKKQITRRQFLQGSALAAGFATVPTPLLAAERPQLNIPPLMDIG
                     RGKPVRLDLRPAQTQFDKGKLVDVWGVNGQYLAPTVRVKSGDFVKLTYLNNLPQKISM
                     NIQGLQASSEMIGTVHRSLDPKSSWSPIVSINQPACTCWYHADTMLNSAFQVYRGLAG
                     LWMIEDEQSKKATLPNKYGVNDIPLILQDQLLNKDGVQVLDKNTSQFFGKRLFVNGQE
                     SPYFNVPRGWVRLRIVNASLSRAYELRLDNEQPLYLIATGLGMLAEPLETESVQLAPS
                     ERVEVLVDLSEGKAVSLISGQKRDIFYKIGQVFADNDELNDNVILELRPEGMAAVLNN
                     KPSLPAFNLEEFNLKISQERRFAIRPADYLINQKRFDPKRIDFTAQKGSVERWYLHST
                     QAVGFTLQGAKFIIETLNRKQYPIKQLAWRDTVWLEAEQEITLLVRFDNTAPEQLPFT
                     FGVSDFMLRDRGTMGQFSVIENGQ"
     gene            complement(10829..11563)
                     /locus_tag="PXD18_001414"
     CDS             complement(10829..11563)
                     /locus_tag="PXD18_001414"
                     /EC_number="2.3.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acylglycerol-3-phosphate O-acyltransferase"
                     /protein_id="HDL6301848.1"
                     /translation="MLKIFRILIVALAAIFISIFGTIYALLRLRHPSSVGVVARWFGA
                     LHKLVGLELITRKKPEINYPVVYIGNHQNNYDMVTISSMVAEKTVSIGKKSLIWIPFF
                     GLVYWATGNIFIHREKRSSAIETMNKAGQIVKERNVSVWMFPEGTRSRGRGLLPFKTG
                     AFHLAISAGVPIVPVVCSNLHNKVDLNRSNNGTVICEMLDPIDTSGYSRENVKELMEK
                     CHQIMLAKFEQLNQEVEQLENTAKNA"
     gene            11710..12207
                     /gene="tpx"
                     /locus_tag="PXD18_001415"
     CDS             11710..12207
                     /gene="tpx"
                     /locus_tag="PXD18_001415"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005578656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HDL6301849.1"
                     /translation="MSKVTLAGSPIDVAGTFPQKGDVVADFTLVNSDLSDVSLSDFDG
                     KRKVLNIFPSIDTGICATSVRVFNQKAADVANTVVLCISADLPFAQARFCGAEGIENA
                     KVLSSFRHRDLHNKLGVDIISGPLAGLTSRSVIVLDENNKVLHSELVPEIKQEPDYEA
                     ALAVL"
     gene            complement(12292..13917)
                     /gene="yidC"
                     /locus_tag="PXD18_001416"
     CDS             complement(12292..13917)
                     /gene="yidC"
                     /locus_tag="PXD18_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HDL6301850.1"
                     /translation="MNNRGLLLMGLFLVSILIFTQWQQDFDPEIQAQKQAQVAAQTQQ
                     AGDLPSASNANNPIADSITQGKTITVESDVLRLTIDTLGGDVIGSDLLKHNAELHSNT
                     PFKLLQQDGDKIYVAQSGLVGKNGIDTNAGRPQYAVTADSFKLAEGQNEISVPLTFEK
                     EGVVYTKTFTLKRGSYDVGVNFNIKNNTAQAIEVQPYGQLKHSIVESSGNLTMPTYTG
                     GAYSSSETNYKKYSFQDMEKANLSVDTKAGWIAVLQHYFVSAWVPNQDADNSLYSRTN
                     NGVATIGYRGPLTTIAPNSEANLNSKLWTGSKDQKEMGESANHLDLTVDYGWAWFIAK
                     PLFWLLTAIQKIVSNWGLAIIGVTIVVKTILYPLTKAQYTSMAKMRMLQPRITEMRER
                     FGDDRQRMSQEMMKLYREEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGW
                     IQDLSAQDPYYILPLLMGGSMFLLQKMSPTPVADPVQQKVMTFMPVIFTVFFLWFPSG
                     LVLYWLTSNLITIAQQWLIYRNLEKKGLHSRKK"
     gene            complement(14070..14495)
                     /locus_tag="PXD18_001417"
     CDS             complement(14070..14495)
                     /locus_tag="PXD18_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog fold thioesterase"
                     /protein_id="HDL6301851.1"
                     /translation="MTIWKQTATCEQLNTLSQKSAVSHLGIEFTAIGEDWIEAQLQVD
                     ERTQQPFGVLHGGVSAALAETTANAGALMVCEPHQIAVGMELNISHLKSIPAGTKAIA
                     KATPLKLGREVQVWNIDIKDEQGNLCAVARLSTKTLDKR"
     gene            complement(14824..17916)
                     /locus_tag="PXD18_001418"
     CDS             complement(14824..17916)
                     /locus_tag="PXD18_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HDL6301852.1"
                     /translation="MIPRLSEVPQLDKATQSYLTELVNQHFSGEIASNYADRLSLATD
                     NSVYQQIPQAILFPKSVSDVVILTKLAQKPEYQHLTFTPRGGGTGTNGQSLNNNIIVD
                     LSRHMNQILELNVEERWVRVQAGVVKDQLNQFLKPHGLFFSPELSTSNRATLGGMINT
                     DASGQGSLQYGKTSDHILAIKSVLINGDILETQAVKSADFFAHIEGLNLSALGKTLHR
                     EIFNRCKTLRPKVLNELPQLNRFITGYDLKNVFNHGESEFNLTRILTGSEGSLAFICE
                     AKLNLLPIPKYRTLINIKYNSFDAALRSAPFMLEAKALSVETVDSKVLNLAKQDIVWH
                     SVSDLLTEDPANPILGINIVEYASSDQTQIETQVKALCQSLDQKMANNEAGIIGYQLT
                     SDVNSIEKIYAMRKKAVGLLGNAKGWAKPIAFVEDTAVPPENLADYIVEFRALLDRYN
                     LPYGMFGHVDAGVLHVRPALDLCDKAQVETFKQISDQVVELTAKYGGLIWGEHGKGMR
                     SYYGERFFGETLWQELRYIKTLFDPYNRLNPGKICTPLESETSLYPIDSQMRADFDRQ
                     IPIQVREEFKGAMNCNGNGLCFNFDVHSTMCPSMKVSGNRLYSPKGRATLVREWLRLL
                     TEQNVSPDDLIFKPRKQAVKLADFVAKIRNTLNKNKEYDFSHEVKAAMDTCLACKACA
                     SQCPIKIDVPTFRSQFNELYHSRYLRPLKDYVVSNLEFIAPLMAKQPRFFNFFSTSTF
                     AEKAANKTIGMTYLPALSVPNLQHQLVEVGYQGESLESLEQQATSGDFSAKNCKTLFI
                     VQDPFTSYYDAKVVADFIALIKKLGFKPIVLPFKPSGKAQHVKGFLHKFAKTAKNQAD
                     FLNRVAKLGLPMVAVDPALTLLYREEYKEILKEARGDFKVLLAHEWLREVIKNGELEN
                     CKKSANSDRLPWYLFAHCTESTALPSSMKEWQAIFTHFGETLLNENVGCCGMAGTFGH
                     ETKHVEMSKAIYQQSWQIKLKNKPLERCLATGYSCRSQVKRFEQQGIKHPIQALLDVI
                     "
BASE COUNT         5167 a         3647 c         3950 g         5333 t
ORIGIN      
        1 aaaaaagatg tacaaatttt tgtgattgtt tatgattggt tttgattgca ttgttcttat
       61 tttagcgtaa atcaggagac tattatgagc aaaattcaag aaatcactcg tgaaagctgg
      121 atcctttcaa ctttccctga atggggtact tggttgaatg aagaaattga agaagaagtt
      181 gtaccggaag gcaattttgc aatgtggtgg ctaggctgtg tcggtgtgtg gattaaaacc
      241 ccagctggtg cgaatatctg tatggattta tggtgcggtc gtggtaaatc caccaagaaa
      301 gtaaaagata tggtgcgtgg tcatcaaatg gcaaatatgg caggggtgcg taagctccag
      361 cctaatttgc gggctcaacc gatggtgtta gatccgtttg cgattaacga agtggacttc
      421 attctcgctt ctcactatca ctcagaccat attgatgtaa acgtggcagc ggctatttgc
      481 aataacccga aattagacca cgttaaattt gtcggccctt ggcactgtgc agaattatgg
      541 aaaaaatggg gcgtgccgga agaacgtatt attgtggtaa aaccgggcga tgtcgtgaaa
      601 ttaaaagatg tagaaattca cgccctagat tcatttgacc gtacctgttt agtgacctta
      661 ccggtagaag gtgcagaaga acgtggcgga gaacttgcag gcttatgccc atcagatgaa
      721 gaaatgggac gcaaagcggt gaactatgtg ttcaaaaccc cgggcggtac gatttatcac
      781 ggtgcagatt ctcactactc aatccaattc gctaaacacg gtaagcaatt tgatattgac
      841 gtagcgctga ataactatgg cgaaaacccg gttggtattg cggataaaat gacttcagtt
      901 gatttattac gtatggcgga gtgtttacgc tgtaaagtga ttattccggt tcaccatgat
      961 atttggacaa actttatggc aagtacgcaa gaaattattg atttatggcg tatgcgtaaa
     1021 gatcgcttac aataccaatt ccacccattt atttgggaag tgggcggcaa atatgtttac
     1081 ccacgtgata aagacttaat tgaatatcat caccctcgcg gctttgatga ctgcttcgag
     1141 caagagccaa atattcaatt taaatccatg ctataggtga gcagtcgcca ctctcactgg
     1201 agagtggcgt tttagcaagt tcattatgga gcagtagtga ttagtaatgg gataaagtag
     1261 tgaacgaaag ttatagacac aaagagttat tagccctgtt ggaagagcgg aaagcactgt
     1321 caacagcaga tattatgcag ctgttaaata tttctccggc aacagcaaga cgtgatatca
     1381 gtaaattaga tggtcaaggt aaattaaaaa aggttagaaa cggagcagaa gcaattctgg
     1441 ctcctacatt tttacagcac acaaaaataa ctaacaatgc gcaggagaaa cgtagaatag
     1501 cggaagctgc cggtcgttta tgtaaagatg gggaaagtct tattctgacg tgtggttcca
     1561 caatggaaat gctcggtgaa gtattatgtg gtagaaaatt gcaaattatt accaattatc
     1621 taccgcttgc aaaccagttg attgcaggtt gccacgatga tgtagtgatt atgggtgggc
     1681 aatataataa acataaaaaa gtgatgctct caattaacac ccaaaatgag atgacttatg
     1741 ccgctaccac aatgtttacc agtggcaaag gcttaaccag cgaaggatta tttaaaaccg
     1801 atatgattat tgccaatgcc gagcaacaaa tggcaaagca cgcagaacgt tatgtggtgt
     1861 tattggatag caccaagctc ggcaaaaaag tcggtatgct gtttaaagag ttcgataaaa
     1921 ttgatttatt gattaccggc aaagaggcgg atccgactat tatccaagca ttaagaaaca
     1981 aaggcctgga tattatcttg gcttagcctg tagcggtcaa atttaatcaa aattttactt
     2041 atcatcttca agggaaaact atgagaaaac ataaactggg tatttacgaa aaggccttgc
     2101 cgaaaaacat ttcgtggcaa gaccgccttt ctatcgccaa agtctgcggt tttgactttg
     2161 tggaaatgtc gattgacgaa acggacgaac gcttagcccg ccttgattgg agcaaaaaag
     2221 aacgtgccaa gctggtgaaa accatcatca acaccggcgt gaccattccg tcaatgtgct
     2281 tgtccggtca tcgccgtttc ccgtttggtt cttgtgatga agcgacccgc caaaaagcct
     2341 atgaaattat ggaaaaagcc attcaactgg cggtcgatct cggtattcgc accattcagc
     2401 ttgccggcta tgacgtctat tacgaagagc aggacgaagg cacaatccaa cgcttccaac
     2461 aaggcttaga atgggcggtg gagctggcgg caagcaacca agttaccatt gcggtggaaa
     2521 ttatggacac ccaatttatg agttcgattt cccgctggaa aaaatgggac gagatcatca
     2581 aatcaccgtg gttcaccgtg tatccagatt taggcaacct ctcagcgtgg aacgacaacg
     2641 tagcggaaga gctgaaactc ggcatcgaca aaatctctgc cattcactta aaagacactt
     2701 acaaagtgac tgaaacctgc aaagggcagt tccgtgatgt gccatttggt gacggttgcg
     2761 tagatttcgc cgcttgtttt aaaacccttg ccgagctgaa ttaccgtggc gcattcttaa
     2821 ttgaaatgtg gacggaaaaa gccgaagagc cgattactga aatcatcaac gcccgccgtt
     2881 ggatcgaaca aaaaatgcaa gaaggaggat ttaccctatg acgcaattaa ctgaattaac
     2941 ccctgcatta caagccttaa gagagcgtgt gttaaaagcc aatttagaat taccgaagta
     3001 tggcttggta actttcactt ggggtaacgt aagtgaaatc gaccgtgaga ccggtttagt
     3061 cgccatcaaa ccttccggcg tagaatacga tgcgatgacg gtggaagaca ttgtattggt
     3121 tgatttacaa ggtaatcgag tttacggaga taaaaaaccg tcttctgata cagaaacgca
     3181 cttagaactt tatcgccaat tcactgatat tggcggtgtg gtacacactc actctcgcaa
     3241 tgctgtaggt tgggcacaag cagggcgtga tttattggca cttggcacca ctcaaggcga
     3301 ttatttctac ggtgcgattc cttgtactcg caaaatgacc gcagaggaaa ttgccggcag
     3361 ttatgagctg gaaaccggaa aggtgattgt cgaaactttc cgaactcgag gtattgaacc
     3421 gaaagcagtt ccaggtgtgt tggtacattc acacggtcca tttacctggg gaaaagatgg
     3481 acacgatgct gtgcataatt ctgtggtatt agaagaggtg gcttacatga attttattag
     3541 ccatcaaatt cgcccacaaa ttggcccaat gcaacaggaa ttattagata agcattatct
     3601 gcgtaagcat ggtgcaaatg cttattatgg gcaatagcta ataacctaaa aattattttc
     3661 caaattatca acagctttcg aggggctttc tataatcgga atagctcctc agtctgtttg
     3721 agtttatgga tagatccaca aataattacc attttccttt tcttgatttt aattttgatt
     3781 tttgttctaa tctctgcctc ttgtttttac aagtctatta aggatccgta gtagatttga
     3841 aataaacaag agtatctttg tatttattag aaggaaacca aaaggtgaaa aatagaaatt
     3901 attttgttgc aatagcaaca atattagcct tatcgccaga ggttaacgca actgaacttt
     3961 cagatcagct tgcaagtaga acaagatatt atccttccgc cacggatagt tattatagtt
     4021 actataaata tgcaccgatt tattcgggct actatacatc gaatagccgt aatggttatt
     4081 cgtcgtggta ttatccaggt agcaatgcag gtgtaacaac cagaactgtt tcgacaacag
     4141 ttaatggcat tacagttaca aaagtttata caacgcataa tgggagaaca accgttcgta
     4201 ccacttatgc tcctgctgtg aacaaaccaa ttgtaaataa accgacaccg attgccaata
     4261 aacccgttgt agatacgcca actcaaccgg ttattgatgc caacccaatt atggatccgc
     4321 cagtccaacc aatagttgat aataaaccca tcactgatac acagcctaat ccaattacag
     4381 ataacaaacc tgtcattgaa tcgccaattg atgacacccg tccagttatc attaggccta
     4441 caacaccggt aaatcttcat cctgaacctg tagctgttgg tgtacccaat gtaggtattc
     4501 gatggaatga ccgctctcgt ggttacaaca ttgatgatcc taataacaaa caaaatgtta
     4561 agttaactgg tgaaggtgtt aaagtcggta tcttagatag tggttttaaa aactatttaa
     4621 tgcaggacga tatactcaaa aaatttggta atcgcgctgt tattattgaa acagggcgta
     4681 ctgccccggc ttctgcaaca catggtattg aggtcgcaga aatggttggg ggagggaact
     4741 ctcgcaatgg agtagcgtct aagtcaacgt tattacttgc ggatattacc aaaacaacaa
     4801 atgcgggtac aggattatcc gcaacagctc caatttatta tgacttatgg aataggggag
     4861 cccgtatttt taaccaatca tacggtattc caaagcctct tacttatttt aataacaata
     4921 gaaattctag ctattactat ttacaccaat ttgatggtaa tgtgttgcaa ttctataagg
     4981 ataaagtaaa agaggggggc ttatttgtct gggctgcggg gaataaccgt ggtgatcttg
     5041 atccatcact ccaagctggg ttacctcatt atgaagctga cttggaaaaa ggttggattt
     5101 ctgttgttgc ggtagcaacc agaactaatc agggattggg taactttgaa tggagcaatt
     5161 tattgccata ttctcaagcc ggtgtggcaa aaaattggac cgttaccgca atgggtgact
     5221 acatctttaa tttaggaggt agaaacatta ttgctagtgg ttcatccttt gcagctccag
     5281 ccgttacggg tacagcagct ctcgtgaaac aaaaatatcc ttggatggat ggtaacctta
     5341 tcaaacaatc tattctctcg acggcaaccg atatcggcgc tcctggagtt gatgatgtat
     5401 atggatgggg tttacttaat attgaaaaag ccactaatgg ccctgcgcgt tttggtaaac
     5461 gactcgcttt agccgataac gtgactgtaa atattccaaa tggaagctat gagttttcca
     5521 ataatattaa cggtgatgca ggcttggtga aaaatggcca aggcgaatta attttatcgg
     5581 gtgctagtac ttttgaaggg gatacaacac tcaatgaagg tgctgtcact attaacggta
     5641 aaaaatatgt gtctaaagta aacgtatctc caagtggtac attggttgtc aataatacca
     5701 cgttagaaaa tggcgtaaat aacgagggta cagttgtcaa ccagggttat tctacgatta
     5761 agagagctta cgttgcttca gcacaaagta cgctagtgtc agatttaggt tcaaacttaa
     5821 atgtaaaagg agaagttgac ttaaacggct ctactttatc actagctgcg gtaaaagagg
     5881 gtaaagctca gtatgtgacc caaaaaggtt tatcaatgag tgctattact tctgattccg
     5941 caattaaggg taactttgct gcaatagaaa cctcagggtt attaactgcg acggcggaaa
     6001 aaaccaatga gaatgaagta aaagcaacag ttagccggaa aaatgtcgcg actgctttag
     6061 agagctcatt ttcggcattg gataaccaaa ttgaaggaaa taatggttct acaaatgcta
     6121 caaatgatga attcgcacaa caagcggcta ctttacaaaa cagtattgca aacatcaata
     6181 cgcaaagtgt ggttttagat agcttatctg gtcaaattta tgcgtctgcg caagcgctta
     6241 cttttgaaaa ctcagaaaca gtgaataaag atctctctaa ccgtcttgta atgttaggaa
     6301 cgctggataa tgtaggtgag actgctggtg tgtgagtaac gggtatttat gggaatggta
     6361 ctctaaaaga aatagggttt ggtgaaggta aaaccaatac ctatgctggc caaataggtt
     6421 ttgataagcc agttacagac catgtgattt taggtgcggc acttaattat tctaaagcaa
     6481 aagtgaactt cgatcgttat ggcggtagtt caaaagcaga tggaataggt gcatcattat
     6541 atgcccgtat aggcaataag cataaaacac cttggtattt acaaggtcga gccggttatg
     6601 gcagtgttga ttcagatgta gagcgtcata ttattttggc ggataataac gcaagtacag
     6661 caaaaatcaa ccaccgagac agagtatttt ctgcttatgt tgaatcaggc tatgacttca
     6721 agcaaggtcg ctttgcgtta actccatttg tcggttttag tcatgatgtt gtcagacgtg
     6781 gcgcattcag tgagcaaaac agtcaatttg gtctcaccgc ggacaaagca acctataaac
     6841 aaacaagcgg attgattggt ttacgaacat ctttagaggt gaatttagct gggatgaaaa
     6901 cgactttcca aggctatgta aatcatcaaa aagcgtttaa tcgagaagat cttagcttta
     6961 aagcaagtta tacaggttta caagatgcaa aattcgacgt aaaaggtatt gggcttgcaa
     7021 aacataaaac gtgggtaggg attggtgcat tggcggaagt aaataaaaat acttccttat
     7081 atgtgaatta cgaccttaaa ctcgcaaaaa atagtggtca caacaacgtt gtgactgctg
     7141 ggattagaat taatttctaa ctgaatcttt ttaaacaaaa cgggcgttta tacgcccgtt
     7201 tttttatagt tatagagata ataatgttat tttatacttc atttaattag gcaatcttta
     7261 cagcttggta actacactgt ggattaacaa tccgatcacg agaagcaata atttgtaact
     7321 cataaagccc tgatctagcg gtttgttcca ttacctcatt gaccgcattt gcagtgtgtt
     7381 caaaggcttc tagatcggat tttccattta ataagttcgc cacaaatagc cctgcggtta
     7441 aatcgcctac accgacaggt tctttggcaa attggtagag tgggcggctg atgtgccaaa
     7501 tgccatcttg gttggcgaac agcatttcaa atttgttgct ctctttgccg actcggctta
     7561 aatgtttaac caatactttt ttcgggcctt tggttaaaat cactttcact gcctcgaccg
     7621 cttgctcaaa attttccacc gttaaaccgg ttaattctct taattccact aaatttggtg
     7681 tgataatgtc ggcttgtgcc attgccagat tgatcaatcc ctcttttacg ccgtctgcca
     7741 caatgcagcc tttgtcgggg tgtcccatta ccgggtcgca tacataaatt gcgtttggat
     7801 tttccgcttt cactttatga aaagcctgaa taatttcggc tacttgttct gccgagccga
     7861 tatagccaga gagtacggca tcgcaacgat gcagttcacc gatattgtga atgccatcaa
     7921 caatgctacc gatttgttct tttggcatca ccataccgcc ccattttcca tattgggtat
     7981 ggttggaaaa ctgtacggta tttaacgccc atacatcaac acctaacagc tgcataggaa
     8041 aagttgaagc cttattgccg gcatagccgt agacaacgtg cgattgtatg gatagtatgt
     8101 ttttcattca ttcactcctt taaaatttca atatgtgttg ttttttagtc atttgaagtt
     8161 gcaaggactt gaagctcatc aagaaatctc tataatcccg cctcgttctc ttatccattc
     8221 aatatgccga cttagctcag taggtagagc aactgacttg taatcagtag gtcaccagtt
     8281 cgattccggt agtcggcacc atcaccttta ttttctgatg agtccccttt aatgtaaaat
     8341 ggcaagattt tgcaaatttt cacaaaaatc ttaccgcttg tagggtgaaa ttgaattaga
     8401 cgtaaccgta attcattaag cgttgataac ggcgttccag taaatcctct ttattaagtt
     8461 gatctaaccc tgccaaatct tcaacaatac gctgtttaag gttttgggcg atttgttcaa
     8521 cattgcgatg agcaccgcct aagggttccg gcacgatgtt atcaatcagc tcaagctctt
     8581 ttaaacgagg ggcagttaaa cccattactt ctgctgccgt tgaggcttta tcggcacttt
     8641 tccacagaat cgaggcacag ccttcaggtg aaattaccga gtaagttgaa tattgcaaca
     8701 tattgacctt atcgcccaca ccgatcgcta atgcaccgcc cgagccacct tcgccaatta
     8761 ccgtacagat tactggcacg gaaagttgag acatttcacg caggttacgg gcaatcgctt
     8821 ctgactgacc acgctcttcc gcaccaatgc ccggataagc tcccggtgtg tcgataaagg
     8881 tgatgattgg catattaaag cgttctgcca tttccattaa acgtaacgct ttgcgatagc
     8941 cttcaggagc aggcatacca aagttacgtt tcactttctc ttttacggta cgacctttct
     9001 gatgaccgat aaccatcacc ggacgtccgt ccagacgggc aataccaccg acaatcgctt
     9061 tatcatcggc aaaggcacgg tcgcctgcca gttcgtcaaa ttcggtgaaa atatgctcaa
     9121 tataatctaa agtgtacggg cgattggggt ggcgtgccat acgggaaatt tgccacgcat
     9181 ctaaattagc aaaggttttc ttggttaatt cctcgctttt cttttgtaaa cgcttgattt
     9241 catcatcaag attaattttg tcatcttgct cgctgactgc tcttaaagac tcgatcttgg
     9301 cttccaattc agcaatcggc aattcaaaat ctaaaaattc ttggctcatt ctattttcct
     9361 ttttatgggc aaaattatgg ggcattatcg cttatcagtc ggttattgtc cattttcaat
     9421 tacgctaaat tgacccatcg tacctctatc acgcagcata aaatcgctca cgccaaaggt
     9481 aaatggcagt tgctcagggg cagtattatc aaagcgaacc aacagcgtga tttcttgctc
     9541 cgcctcgagc caaacggtgt cccgccacgc aagttgtttg atagggtatt gcttgcggtt
     9601 tagggtttca ataatgaatt ttgcaccttg tagcgtaaat ccgaccgctt gtgtgctatg
     9661 taaataccaa cgctcaacgc tgcctttttg cgcggtaaaa tcaatgcgtt ttgggtcaaa
     9721 ccgcttttgg ttgattaaat aatcagccgg acgaatggca aaacgtctct cttggctgat
     9781 tttcaggtta aattcctcta agttgaaagc cggtaaactc ggtttattat tcaataccgc
     9841 tgccattcct tcagggcgaa gctctaaaat cacgttatca ttcaattcgt cgttgtcagc
     9901 aaagacctgc ccgattttgt aaaaaatatc tcttttttga ccgcttatca gcgataccgc
     9961 tttcccttcg cttaaatcga ccaacacttc caccctttca ctcggtgcaa gttgaaccga
    10021 ttcggtttca agtggctctg ccagcattcc taagccggtg gcgattaggt acaacggctg
    10081 ctcgttatct aagcgtaatt cataagcacg ggaaagtgag gcattgacga tccgcaatct
    10141 gacccagcca cgaggcacgt taaaataagg cgattcctgc ccgttgacaa ataatcgctt
    10201 accgaaaaat tgtgaggtgt ttttatctaa cacctgtacg ccgtctttgt tgagcagctg
    10261 gtcttgcaga attaacggaa tgtcgttcac gccatattta ttcggtaaag tggctttttt
    10321 gctctgttca tcttcaatca tccacaagcc ggctaagcca cgatacactt ggaatgccga
    10381 gttgagcatt gtatcggcgt gataccaaca agtacaagcc ggttgattga tagaaacaat
    10441 cggcgaccag ctacttttgg ggtcaaggga acgatgcacc gtgccaatca tctcacttga
    10501 ggcttgcaat ccttgaatat tcattgagat tttttgcggt aaattattga gataagttaa
    10561 tttgacaaaa tcccccgatt ttacccgtac ggttggggca agatattgcc cgttcacacc
    10621 ccatacatca accaatttgc ctttatcaaa ttgggtttgt gcggggcgta aatccaaccg
    10681 aaccggcttt cctcgcccaa tatccattaa aggcggaatg ttcagttgcg gtcgctctgc
    10741 tgctaatagc ggtgttggca ctgttgcaaa tccagccgca agggcagagc cttgtaaaaa
    10801 ttggcgtcgg gtgatctgtt ttttcatatt aggcgttttt tgcagtgttt tctaactgtt
    10861 cgacttcttg attaagttgt tcaaattttg ccaacataat ttgatggcac ttttccatca
    10921 gttctttgac gttttcacgg gaatagcctg aagtatcaat cggatcaagc atttcacaga
    10981 ttactgtgcc gttatttgaa cggttcaaat ccactttatt gtgtaaatta gagcaaacta
    11041 ccggcacaat cggcacgccg gcagaaatgg ctaaatggaa tgcaccggtt ttaaatggca
    11101 gtaaaccacg cccacggcta cgagtacctt ccgggaacat ccacaccgac acattgcgtt
    11161 ctttcacgat ttgccctgct ttattcattg tttcaatcgc actggaacgc ttttcacggt
    11221 gaataaaaat attgccggtt gcccagtaaa ccaaaccgaa aaacggaatc caaatcaggc
    11281 tttttttgcc gatactcacc gtcttttctg ccaccattga ggaaatcgtt accatatcgt
    11341 aattgttttg atgattgccg atatagacaa ccggatagtt aatttccggc tttttgcggg
    11401 taattaattc caacccgact aatttatgca aagcaccaaa ccaacgagct accacaccca
    11461 cgctacttgg gtgacgtaaa cgcagtaacg cataaatagt gccaaaaata gaaatgaaaa
    11521 tagcggcaag ggcaacaatt aaaatacgaa aaatttttaa cataatggaa taaccttaaa
    11581 aataaattgt ctaggagtat agcaaaataa ggttattttc taaaggctat ccacattaaa
    11641 ttgatagttt cctattttgc aaaaaatcgg tatatttaaa ccgcttgttt atttgataag
    11701 gagaaaaaaa tgagtaaagt gactttagca ggaagcccga ttgatgttgc aggcacattt
    11761 ccacaaaaag gcgatgtggt tgccgatttt accttagtca acagtgattt aagtgatgtt
    11821 tcgctttccg attttgatgg caaacgcaaa gtgttaaata ttttcccaag tattgacacc
    11881 ggcatttgtg ccacttctgt gcgtgtgttt aatcaaaaag cggctgatgt agcgaatacg
    11941 gttgtccttt gtatttcagc ggatttacct tttgcccaag cacgtttctg tggagcagaa
    12001 ggaattgaaa atgccaaagt attatccagt ttccgtcatc gtgatttaca caacaaactg
    12061 ggggtagata ttatttcagg tccgttggca ggcttaactt cacgttcagt aattgtgtta
    12121 gatgaaaaca acaaggtatt acacagcgaa ttagtgccgg aaattaaaca agagccggat
    12181 tatgaggcgg cgttagcggt attataattt gcagaattat gctggaaaat aaccgcttgt
    12241 aaagcaacaa aaagcccgtt gattcaattc aacgggcttt gtttttagtg attatttctt
    12301 acgagagtgt aagccttttt tctcaaggtt acggtaaatc aaccattgct gtgcaatcgt
    12361 gattaagttt gaggttaacc agtaaagcac taagcctgat gggaaccata agaagaacac
    12421 ggtaaagata accggcataa aggtcattac tttttgttgt accgggtcag ctaccggtgt
    12481 tggcgacatt ttttgtaaca agaacatcga accacccatt aataaaggca aaatgtagta
    12541 tgggtcttgt gccgataagt cttgaatcca gccgaagaaa ggtgcgtggc gtaattctac
    12601 cgcttccata aatgtccaat ataaagcaat gaaaatcggc atttggatta aaattggtaa
    12661 gcagccaccc attgggttca ctttttcttc tctgtagagt ttcatcatct cttggctcat
    12721 acgttggcgg tcgtcgccga aacgttcacg catttcagta atgcgaggtt gtaacatacg
    12781 catttttgcc atcgaggtgt attgtgcttt ggttaatggg taaagaatgg ttttcactac
    12841 aatagtgaca ccgataattg ccaagcccca gttgcttacg attttttgaa ttgcggttag
    12901 taaccagaaa agcggtttag cgataaacca cgcccagccg taatctacgg ttaagtctag
    12961 gtgatttgct gattcgccca tttctttctg atctttagaa cctgtccaaa gtttgctatt
    13021 taaattagcc tctgaatttg gcgcaatcgt agttaaaggg ccacggtaac cgatagttgc
    13081 taccccatta ttggtgcgtg aataaaggct gttatccgca tcttggtttg gcacccaagc
    13141 agacacgaaa tagtgctgta ataccgcaat ccaacccgct ttggtgtcca cgcttaagtt
    13201 ggctttttcc atatcttgga aactgtattt tttgtagttg gtttctgaag aagaataagc
    13261 cccgccggtg taagtcggca tggttaaatt gccggaactt tcaactatag agtgttttaa
    13321 ttgcccgtaa ggctgaactt caatcgcttg tgcagtatta tttttgatat tgaagtttac
    13381 cccaacatcg tagctaccac gttttagcgt gaaagttttg gtgtaaacca caccctcttt
    13441 ttcaaaggtt aatggtacag aaatttcatt ttgcccttcg gctaatttga agctatctgc
    13501 cgttaccgca tattgtgggc gaccggcatt ggtatcaatc ccgtttttac ccactaaacc
    13561 gctttgagca acgtagattt tgtcgccgtc ttgctgtaat agtttaaatg gcgtgttaga
    13621 gtgtaattca gcattgtgtt ttaacaaatc tgagccgatg acatcaccgc ctaaggtatc
    13681 aatagtcaga cgtaatacat cgctttccac ggtaatggtt ttaccttgcg tgatgctatc
    13741 tgcgattgga ttattggcat tggaagcaga cggaagatca cccgcttgtt gggtttgtgc
    13801 tgccacttga gcttgttttt gtgcttgaat ttcaggatca aaatcttgtt gccattgtgt
    13861 aaaaatcaaa atagacacaa gaaataaacc cattagcagt aagccacgat tattcatgtt
    13921 ggaattctct tgttagtaat ggataaaaag aaaggtattt tataataggt tagcttgttt
    13981 tccaaacgcc ttttatgaac aagcggtcgg attttccaag ttttttgcaa aattttcgga
    14041 gaatttgacc gcttgtggag aataagaaac tagcgtttat ctaaggtttt ggtggaaagg
    14101 cgagcaactg cacacaggtt accttgttcg tctttaatgt cgatattcca aacctgtact
    14161 tcacgcccta atttcagcgg tgtagctttg gcaatcgctt ttgtgcctgc cggaatcgat
    14221 tttaaatggc tgatgtttag ctccattccc accgcaattt gatggggttc acacaccatt
    14281 aacgcccctg cattggcagt agtttccgcg agtgctgccg atacaccgcc gtgcaatacg
    14341 ccaaacggct gttgagtgcg ttcgtccacc tgaagctgtg cttcaatcca atcttcaccg
    14401 atagcggtaa attcaatccc taagtgtgac accgccgatt tttggctgag tgtgtttaat
    14461 tgttcacaag ttgctgtttg cttccaaatg gtcattatta tttcctgtct aataaaaaag
    14521 ctgtctattt agacagcttt cattatctct ttgagcgaaa catactacgc caatagtaca
    14581 ttgtttggtc gcccatatta ccttaagcca tatagcacta aggaggtgat ttatgtgaga
    14641 aaatcagaag ttttctttct ggttgcgttg ctaatattat tagcaacttc cgctagcatt
    14701 aaagtactca ccatacttga tgtgctagtt tggttattcg ctagataacc taaaatcaga
    14761 cagaggcagg ctggttacct gcctcgcttt ttattctaag tacttttagg ttacatttca
    14821 accttaaatc acgtccagca acgcttgaat tgggtgttta atgccttgtt gttcaaaacg
    14881 tttgacttgc gagcggcagg agtagccggt tgctaggcaa cgctcaagcg gtttattttt
    14941 taatttaatt tgccatgatt gctgataaat cgctttcgac atttcaacgt gtttggtttc
    15001 gtgtccgaac gtgcctgcca ttccacagca accgacattt tcattgagta aggtttcacc
    15061 aaaatgggtg aaaatagctt gccactcttt cattgagctt ggcaaggcgg tggattcggt
    15121 gcagtgagca aataaatacc acggcaagcg gtcggaattt gccgattttt tgcaattttc
    15181 cagctcgccg tttttaatca cttcccttaa ccattcgtgt gccaataaga ctttgaaatc
    15241 cccccgagct tctttgagga tctctttgta ttcttcacga taaagcaaag ttaaggcagg
    15301 atcgacagcc accatcggta gccccaattt cgccacacgg tttaaaaaat cggcttggtt
    15361 tttcgctgtt ttcgcaaatt tatgcaaaaa gcctttaacg tgttgtgctt taccgcttgg
    15421 cttgaatggc aacacaatcg gcttaaagcc taatttttta atgagagcga taaagtctgc
    15481 caccactttg gcatcgtaat aagaggtaaa cggatcttgc acaataaaca aggttttgca
    15541 attttttgca gaaaaatcac cgcttgtagc ttgttgttca aggctttcta agctctcgcc
    15601 ttggtagccg acttccacca actgatgttg cagatttggc actgacaatg ccggcaaata
    15661 ggtcattcca atggttttgt ttgcagcttt ttcggcaaaa gttgaggtgc tgaaaaagtt
    15721 aaaaaaacgt ggttgtttcg ccattaaagg ggcgataaat tctaagtttg agaccacata
    15781 atctttcagt ggtcgcaaat agcggctgtg gtaaagctcg ttaaattgcg atctgaacgt
    15841 cggtacgtca attttgattg ggcattggct ggcacaggct ttgcaggcaa ggcaggtgtc
    15901 catcgccgct ttgacttcgt gtgaaaaatc atactctttg tttttattga gcgtgttgcg
    15961 aatttttgca acaaaatcag ctaatttgac cgcttgtttg cgaggtttga agatcaaatc
    16021 gtccggcgaa acgttttgtt cggtaagtaa tctgagccat tcacgcacaa gagtagcccg
    16081 ccctttcggt gagtaaagac ggttgcccga gactttcatt gaagggcaca tcgtgctgtg
    16141 tacatcaaag ttaaaacata gcccgttgcc gttacaattc attgctcctt taaattcttc
    16201 tcgcacttgg attggaattt ggcggtcaaa atcggctcgc atttgtgagt caatcgggta
    16261 gagcgaggtt tcgctttcta atggtgtaca aattttacct gggttcaagc gattgtacgg
    16321 gtcaaataag gttttgatgt aacggagttc ttgccacaaa gtttcgccaa agaaacgttc
    16381 gccgtagtaa gaacgcatac ctttgccgtg ttcgccccaa atcaagccac cgtatttggc
    16441 ggtgagttcg actacttggt cggaaatttg cttaaaggtt tccacttggg ctttgtcgca
    16501 taagtcaaga gcagggcgaa cgtgtagcac gccggcatca acgtggccga acattccgta
    16561 aggcagatta tagcgatcta ataaagctcg aaattccacg atgtaatcgg caaggttttc
    16621 cggtggcaca gcggtgtctt ctacaaaggc gatcggtttt gcccagcctt tggcattgcc
    16681 tagcaggcct acggcttttt tccgcattgc gtagattttc tcgatagaat ttacatcact
    16741 cgtgagttgg tagccgataa tcccggcttc attatttgcc attttttgat caaggctttg
    16801 gcagagtgct ttcacttggg tttcaatttg agtctgatcg cttgaggcat attcaacaat
    16861 gttaatccct aaaatcgggt tggctgggtc ttcggttaat aaatctgaca ccgaatgcca
    16921 gacgatatct tgcttggcaa gattgagcac tttggaatca accgtttcca ccgataaggc
    16981 ttttgcctct aacataaaag gagcggagcg taaggcggca tcaaaggaat tatatttaat
    17041 attaattaag gtgcgatatt tgggaatcgg cagtaaattc agtttggctt cgcaaataaa
    17101 ggcaagcgaa ccttcagaac cggttaaaat acgggtaagg ttaaattcgc tttcaccatg
    17161 gttaaacaca ttttttaaat catagccggt aataaaacgg ttaagctgag gcagttcgtt
    17221 cagcactttg gggcgtaatg ttttgcaacg gttgaaaatt tcacggtgca aggttttgcc
    17281 gagagcggag agatttaacc cttcaatatg tgcaaaaaaa tcggcagatt tgaccgcttg
    17341 tgtctctaaa atatcgccgt taataagcac agatttgatg gcaagaatat gatcagatgt
    17401 tttgccatat tgcaaagaac cttgcccaga ggcatcggtg ttgatcattc cgcctaaagt
    17461 cgctcggtta ctggtagaaa gttcggggga aaagaaaagt ccatgtggtt ttaaaaattg
    17521 attgagctgg tctttcacca cgccagcctg cactcgaacc caacgctctt ccacattcag
    17581 ttccaaaatc tgattcatat ggcgggagag atcaacaata atattattgt taagagattg
    17641 cccgttagtg cctgtgccac cgcctcgtgg agtaaaagtt aaatgttgat attctggctt
    17701 ttgggcaagt ttggttagaa ttacgacatc agaaacggat ttcggaaaca gaatagcttg
    17761 cggaatttgc tgatacacgc tgttgtctgt tgccagtgaa agcctatctg cataatttga
    17821 tgcaatttcc ccactaaaat gctgattgac gagttcagtt aaataggatt gggtggcttt
    17881 atccagttgc ggtacttcag agagtctagg tatcataagc tgtgtttggt tttttataat
    17941 aaaagcacta aattttgctt atcttagcaa tttttctaaa aattgggaat ggaatatcaa
    18001 tttgattaaa tagtgttcga aaaatggttt tttggttaaa atatagacaa attattacgt
    18061 ttctatacat ttcatcagga aaaaacgatt gattttt
//
LOCUS       DANLXD010000051        17481 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.051, whole genome shotgun sequence.
ACCESSION   DANLXD010000051 DANLXD010000000
VERSION     DANLXD010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17481)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17481)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17481
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.051"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..567
                     /locus_tag="PXD18_001419"
     CDS             <1..567
                     /locus_tag="PXD18_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301853.1"
                     /translation="DILERIANMPIIWKNFEENYLYNKKLDGLWSTNTNYIIDYKLLN
                     IPEEQPNVIIEFMVNKDDNSILGEMTSTALCELIPLTWSFRLESPKPTLLNLIFDREL
                     KLSYLVSGGYTELSTFKIKEINSNLGTLTLTTQEDKTGIFPPTIKLINFSSNIEDDIK
                     EIEQSCLNSRKQLWEKRRKMQEEQKIPN"
     gene            684..3548
                     /locus_tag="PXD18_001420"
     CDS             684..3548
                     /locus_tag="PXD18_001420"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012771641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HDL6301854.1"
                     /translation="MTKQFTMEDRFNPSAVEQALYQHWESQGYFKPSEDINAPSYCIA
                     IPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVERKIAA
                     EEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERFTMDEGLSNAVK
                     EVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPLANGAKTAD
                     GLDYLVVATTRPETMLGDTAVAVHPEDERYQALIGKSVILPLANREIPIIADEYVDRE
                     FGTGVVKITPAHDFNDYEVGKRHGLPMVNVMTLNADIRAEAEIIGTDGKPLSDYTAPI
                     PADYQGLERFAARKKIVADFEALGLLDQIKPHDLKVPYGDRGGVPIEPMLTDQWYVSV
                     KPLAEVATKAVEDGEIQFVPKQYENLYFSWMRDIQDWCISRQLWWGHRIPAWYDEQGN
                     VYVARDEAEVRAKHNLPADLPLKQDEDVLDTWFSSGLWTFSTLGWPEQTKELKMFHPT
                     DVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRDEQGQKMSKSKG
                     NVLDPIDMIDGISLDDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIVAHGTDALRFTL
                     TALASNGRDINWDMKRLEGYRNFCNKLWNASRYVLTNDKLDLSEGDVEFSLADRWIES
                     QFNRTVETFRTALSQYRFDLVANAIYEFTWDQFCDWYLELTKPIFFKGTDVQRRGASR
                     TLVNVLEKLLRLIHPVMPFITEEIWQKVKGFVGIEADTIMLQKFPQFDPLAIDETAES
                     QINFIKEVIVAVRNIRAESNIAPSKGLDLIARNFSADEVSILNANEVLLKSMAKLDSV
                     KVLENGENAPLSVAKLVANGEILIPMAGFINKEAELARLTKEMDKLKGEVARIEGKLS
                     NEAFVAKAPEQVIAKEREKMQEYLSGLEKLQVQYQEIEAL"
     gene            complement(3619..4212)
                     /locus_tag="PXD18_001421"
     CDS             complement(3619..4212)
                     /locus_tag="PXD18_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylneuraminate cytidylyltransferase"
                     /protein_id="HDL6301855.1"
                     /translation="MLTDQDIFNRYQTKKSEFEKQADISLIGHSLFDMWGDMENGTPN
                     LAGKTVANLGLSGTSTRQYLDVITRQERIQHVGDNVFIFLGVNDIVKEPDYSPKQVLE
                     WIGEIVDSLRKINPNANFFLLEATPVNNITTTNNAAIKELNAYFEANIPSDLTYVKTW
                     EYFADKEGNLDLTLCHDGLHFTQAGYDRLEAILTKHL"
     gene            complement(4347..5801)
                     /gene="gnd"
                     /locus_tag="PXD18_001422"
     CDS             complement(4347..5801)
                     /gene="gnd"
                     /locus_tag="PXD18_001422"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HDL6301856.1"
                     /translation="MSQKGDIGVIGLAVMGQNLILNMNDNGFKVVAYNRTTSKVDEFL
                     EGAAKGTNIIGAYSLEDLAAKLEKPRKVMLMVRAGEVVDQFIEALLPHLEEGDIIIDG
                     GNSNYPDTNRRVKALAEKGIRFIGSGVSGGEEGARHGPSIMPGGDESAWQYVKPIFQA
                     ISAKTDKGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFLKDGLGLSYDEMH
                     EIFKEWKNTELDSYLVDITTDILAYKDEDGEPLVEKILDTAGQKGTGKWTGINALDFG
                     IPLTLITESVFARCVSAFKDQRVAASRLFNKEIGKVEGDKKVWVEAVRRALLASKIIS
                     YAQGFMLIREASEQFGWDINYGNTALLWREGCIIRSRFLGNIRDAYEANPYLVFLGSD
                     PYFKDILENCLADWRKVVAKSVEIGLPVPCMASAITFLDGYTSARLPANLLQAQRDYF
                     GAHTYERTDKARGEFFHTNWTGRGGNTASTTYDV"
     gene            complement(5884..6573)
                     /locus_tag="PXD18_001423"
     CDS             complement(5884..6573)
                     /locus_tag="PXD18_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HDL6301857.1"
                     /translation="MKTLGILGGMSAESTVSYYLDINRSVNKVLGGNSSAKILISSVN
                     FEEIVQCQKQGNWQAAAEILSEQARLLEQAGAEGILLATNTMHKIADQISSHISVPFL
                     HILDCVAEAISAQGLQKVALLGTKFTMSDNFYKDGLLERGITSIVPDEETQQEIHRII
                     FEELCLGKITESAKAFYLQTIQQLSEQGAEGVILGCTEIGLLINQNDNPLPFFDTAAL
                     HSQMAVEFILG"
     gene            complement(6583..7470)
                     /locus_tag="PXD18_001424"
     CDS             complement(6583..7470)
                     /locus_tag="PXD18_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6N domain-containing protein"
                     /protein_id="HDL6301858.1"
                     /translation="MNPIQLIEPNINSKIFTIRGEQVMLDVHLAELYQVDTRTFNQAV
                     KRNEERFPDIFRFQLTENEWLSLRSQFVILNENSGRGQHRKYLPYVFTEQGIAMLSAV
                     LRSEVAVQVSIKIMQAFVQMRHLLQTNSGLVQRLESVERKQLEMSGQLEQVFQSLEGN
                     KPKMQGVFFEGETFNAYQFVTELVRGAKSSLILIDNYVDDTVLTLFTKRSHNVSVTIY
                     TKQISKQLALDLEKYNSQYAHINVKIFDKSHERFLIIDEKELYHIGASLKDLGKKWFA
                     FSKMDLSMSRILEKLAENQ"
     gene            complement(7646..8344)
                     /gene="pgl"
                     /locus_tag="PXD18_001425"
     CDS             complement(7646..8344)
                     /gene="pgl"
                     /locus_tag="PXD18_001425"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HDL6301859.1"
                     /translation="MNKVIFPTAQAAVEQIAKEFIEYSHQNRPVHISLSGGSTPKLLF
                     KTLAQAPFNTEIQWQNLHFWWGDDRMVAPTDPESNYGEVQKLLFDHIDIPSENIHRIR
                     GEENVEQELARFSAELTACVPNLAFDWIILGMGTDGHTASLFPHQTDFNDQNVAVIAK
                     YPETGQIRISKTASLIEKAKRITYLVTGASKAEILKEIQTTPAENLPYPAAKIQAENG
                     VTEWYLDSEAANLL"
     gene            complement(8484..9971)
                     /locus_tag="PXD18_001426"
     CDS             complement(8484..9971)
                     /locus_tag="PXD18_001426"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HDL6301860.1"
                     /translation="MNAENSCIVIFGASGDLTFRKLIPALYNLYKIGRLGEHFSVLGV
                     SRSELTDESFRQKMRDALVKFEKASGEELDKFCEHLYYQAVNTSDAVDYAKLLPRLDE
                     LHDKYQTAGNTLYYLSTPPSLYGVIPECLAAHGLTTEEFGWKRIIVEKPFGYDIETAK
                     KLDVQIHKCFEEHQIYRIDHYLGKETVQNLLVLRFSNGLFEPLWNRNFIDYVEITGAE
                     SIGVEDRGGYYDGSGAMRDMFQNHLLQVLAMVAMEPPAIINANSMRDEVAKVLYCLHP
                     LTEEDVKHNVVLGQYARGTVDGKEVPAYLEEKGVPADSNTETFMAVKCKIDNWRWAGV
                     PFYVRTGKRLPTRVTEIVIHFKTTPHPVFSQNAPENKLIIRVQPDEGISMRFGLKKPG
                     AGFEAKEVSMDFRYSDLSSSSSLLTAYERLLLDALKGDATLFARTDAVHACWKFVQPI
                     LAYKANRGRVYEYESGTWGPTEADKLIARHGKVWRKPSGTMKKKV"
     gene            complement(10046..10864)
                     /gene="cysQ"
                     /locus_tag="PXD18_001427"
     CDS             complement(10046..10864)
                     /gene="cysQ"
                     /locus_tag="PXD18_001427"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HDL6301861.1"
                     /translation="MQTLTQPLLENIINIAKAAGEQLKQLYARSVAIKIKADCTPVTE
                     ADLIISQFLTERLKQLTPDIPVLSEEFCDIPFAERQQWQEYWIIDPIDGTQQFINRTG
                     QFSVVIALVQKREGRNQPVLGVIHAPILGKTYFSMEGSGSFLQENGEIRPLVKPKRAE
                     NALLIVTVGSDLHAEQAKNAISAPQIECVKYGSGSLKAGLVAEGKADCYIRFGDTGEW
                     DTAVAEVLLSEMGGKIFDFNFSPLTYNQRESLINPYFVMVADGSIDWDKIFLFK"
     gene            complement(10878..11420)
                     /gene="nudE"
                     /locus_tag="PXD18_001428"
     CDS             complement(10878..11420)
                     /gene="nudE"
                     /locus_tag="PXD18_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP compounds hydrolase NudE"
                     /protein_id="HDL6301862.1"
                     /translation="MIKQLPEILNIKTVAKSRIFEVQAVDLRFSNGEERTYERLTPNR
                     RSSVMVIPIQNNELIFVKEYAVGSERYELGFPKGIVDAGEEPIESANRELQEEIGFGA
                     KKLDFLRSLYSSPSHMYGLMHLFLAQDLYPSKLEGDEPEPLEIVRYPLDKIDQLLADP
                     DFAEARNLSALFMLREYLKK"
     gene            11508..11924
                     /gene="hslR"
                     /locus_tag="PXD18_001429"
     CDS             11508..11924
                     /gene="hslR"
                     /locus_tag="PXD18_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated heat shock protein Hsp15"
                     /protein_id="HDL6301863.1"
                     /translation="MKNKHEKEQNDAEVRLDKWLWAARFYKTRSIAKAMIEGGKVHYN
                     GQRAKVSKAVEIGAIIKLRQGNEEKEVEVLALSDQRRGAPEAQLLYSETEKSIKHREA
                     MAFARKANALSMPHPDRRPNKKERRDLIKFKEQEFS"
     gene            12168..13061
                     /gene="hslO"
                     /locus_tag="PXD18_001430"
     CDS             12168..13061
                     /gene="hslO"
                     /locus_tag="PXD18_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HDL6301864.1"
                     /translation="MNYTKDNDKLYRYLFKDRAVRGEWVRLNNTFTETLNTHHYPKAV
                     QNLLGEMLVATSLLTATMKFNGNITVQIQGDSPLKLAVVNGNDQQQLRALARVQADIA
                     DTASLAEMIGNGVLVISIIPTDGERYQGVIALDKPTIRECLEDYFARSEQLQTHLVIR
                     TGEFEGKAVAGGMLLQIMPDGTGSRDDFEHLATLTETVKDEELFGLEAEELLYRLYHE
                     EQVEVYPPQDTEFKCGCSRERSGSALLLVPAEEIEEMLEEKQGVIDMQCECCGTQYFF
                     DKAAIEGFKEETEKLSKLGLN"
     gene            complement(13135..13773)
                     /locus_tag="PXD18_001431"
     CDS             complement(13135..13773)
                     /locus_tag="PXD18_001431"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HDL6301865.1"
                     /translation="MQNKIDWQKVDGLLPVIVQNAQTCEVLMLGYMNQQALEKTLAEK
                     RVTFYSRTKQRLWTKGETSGNFLNVVDMSLDCDNDTLLILANPIGETCHTGAESCFHQ
                     FEQEQPDWIFFSKLERMIAERKNADPESSYTAKLYAKGTPKIVQKVGEEAVESVIAAM
                     KNDREELVGEVADLMYHLTVLLHNADLSWAEINAKLKERHKGIGLHPEGSNK"
     gene            complement(13801..14187)
                     /locus_tag="PXD18_001432"
     CDS             complement(13801..14187)
                     /locus_tag="PXD18_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDL6301866.1"
                     /translation="MIKITALDHLVLTVADMQKTIDFYTTILGMQEITFGDNRKALLF
                     GTQKINLHQKGAEILPNAQNADCGTADLCLLTVTPLQEVIYVLQRHQVEILEGGIVPR
                     TGAVGKIESVYCRDPDGNLIEISLYV"
     gene            complement(14184..14957)
                     /gene="hisF"
                     /locus_tag="PXD18_001433"
     CDS             complement(14184..14957)
                     /gene="hisF"
                     /locus_tag="PXD18_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDL6301867.1"
                     /translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAQRYAQEGA
                     DELVFYDITASSDSRTVDKSWVERVAQVIDIPFCVAGGIKTIADAEQIFAFGADKISI
                     NSPALANPELITELAKRFGVQAVVVGIDSWFEAETGKYWVNQYTGDEKRTRQTEWQLL
                     DWVEEVQKRGAGEIVLNMMNQDGVRNGYDLVQLKKVREVCQVPLIASGGAGEMVHFRD
                     AFIEANVDGALAASVFHKQIINIGELKEYLAKEGVEVRR"
     gene            complement(14939..15688)
                     /gene="hisA"
                     /locus_tag="PXD18_001434"
     CDS             complement(14939..15688)
                     /gene="hisA"
                     /locus_tag="PXD18_001434"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006995165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HDL6301868.1"
                     /translation="MQKSIIIPALDLIDGQVVRLHQGDYAKQTTYADDPIAQFADYLA
                     QGAEQLHLVDLTGAKNPAQRQTALIGKIIRETHCKIQVGGGIRTEQDVADLLAVGANR
                     VVIGSTAVKEREMVKGWFKKYGAEKFVLALDVNIDAIGQKIIAMSGWQEASGVSLEEL
                     IEDYQTVGLQHVLCTDISRDGTLAGSNVDLYREICAKYPEIQFQSSGGIGSLADIKAL
                     CGTGVAGVIVGRALLEGKFNVAEAIECWQNG"
     gene            complement(15858..16703)
                     /locus_tag="PXD18_001435"
     CDS             complement(15858..16703)
                     /locus_tag="PXD18_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor protein"
                     /protein_id="HDL6301869.1"
                     /translation="MNEIKLFENSQIRSVWDSEKEEWFFSVVDIIEVLTQSSNPRRYW
                     SDLKRKIKDEEGGIELYEKIVQLKLKAPDGKMRETDATDLQGIFRIIQSVPSPKAEPL
                     KMWLAEVGKERIDEIIDPELTIDRALATYLKKGYSREWINQRLQAIQVRKELTDTWQD
                     HGVQVGREFAILTNEITQAWSGMTTRQYKDFKGLKKESLRDNMTTTELVLNMLAEAAT
                     KDIAQISHPQGLEENKTVAKRGGNVAKVARESLEAETGKPVITQQNAIDFAAVIEQVA
                     KQVKK"
     gene            complement(16802..17395)
                     /gene="hisH"
                     /locus_tag="PXD18_001436"
     CDS             complement(16802..17395)
                     /gene="hisH"
                     /locus_tag="PXD18_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDL6301870.1"
                     /translation="MTNLTIIDTGCANLSSVKFAFDRLGIRAEISRDLNKIQSADKLL
                     LPGVGTAAAAMAILHDRRLIDTIRNATQPMLGICLGMQLMTDFSHEGDVATLNLMSGK
                     TERLPECGLPLPHMGWNKVQYQADHPLFHDIEQGNHFYFVHSYGVLPNENTIATCDYG
                     VPFSAAIASQNFYGVQFHPERSGEAGAKLLRNFVENV"
BASE COUNT         4872 a         4022 c         3622 g         4965 t
ORIGIN      
        1 gatattttag aacgcatcgc aaacatgcct attatttgga aaaatttcga ggagaattac
       61 ctatataata aaaaactgga tggtttatgg tctacaaata caaattacat tatcgactat
      121 aaattattga acatacctga agagcaacca aatgttatca ttgaatttat ggttaataaa
      181 gatgacaatt cgattttagg ggaaatgact tcaacagctc tgtgtgagtt aatacctcta
      241 acttggagtt ttagattgga aagccctaag ccaacattat taaatcttat tttcgataga
      301 gagttgaaat tgagttatct tgttagtggg ggatataccg agctatcaac atttaaaatt
      361 aaagaaatta acagtaatct aggaacacta acattaacta cgcaagaaga taaaaccggt
      421 atatttcctc cgacaatcaa attaatcaat ttttcatcca atatagaaga tgatattaaa
      481 gagattgagc aaagctgttt aaatagccga aagcaattat gggaaaaacg aagaaaaatg
      541 caagaggaac aaaaaattcc caattaatct tttagttgac cttaatttaa ataactaatt
      601 acctataaaa gcatttacgg caaagatctt ttttataaga ttaagctagt gaaaaaatta
      661 ttaaacaaga gaaaacaaaa ccaatgacaa aacaattcac aatggaagac cgttttaacc
      721 cttccgctgt agagcaagcg ctctaccaac actgggaatc gcaaggctat tttaagccga
      781 gtgaagatat taatgcaccg agctactgta tcgctattcc gccgccgaat gtgacgggga
      841 gtttgcatat ggggcacgct ttccagcaaa ccttgatgga tacgctgatt cgttttaacc
      901 gtatggaggg caacaatacc ctttggcaaa caggaactga ccacgcaggg attgccactc
      961 agatggtggt ggagcgtaaa atcgcagcgg aagaaggtaa aacccgccac gattatgggc
     1021 gtgaagcctt tatcaacaaa atctgggatt ggaaagccta ttcgggcggc acgatcagcc
     1081 agcaaatgcg tcgcttaggc aactcgattg actgggatcg tgagcgtttt acgatggacg
     1141 aaggcttatc caatgcggta aaagaggtgt tcgttcgctt gcacgaagaa ggcttgattt
     1201 accgtggcaa acgcctcgta aactgggatc cgaaactgca tactgcgatt tctgacttgg
     1261 aagtggaaaa caaagaaagc aaaggctcgc tgtggcattt ccgctatccg ctggctaatg
     1321 gtgcaaaaac cgcagacggc ttggattact tagtggtggc aacgacccgt cctgaaacga
     1381 tgttgggcga tactgcggtg gcggttcacc ctgaagatga gcgttatcaa gctctgattg
     1441 gcaaaagcgt aatcctaccg cttgccaacc gtgaaatccc gattattgcc gatgagtatg
     1501 tggatcgtga gttcggtacg ggcgtggtaa aaatcacccc tgcccacgat ttcaacgact
     1561 acgaagtggg caaacgccac ggcttgccga tggtgaatgt gatgacctta aatgccgata
     1621 ttcgtgcaga ggccgaaatt atcggcacag acggtaaacc gctttccgac tacaccgccc
     1681 caattcctgc cgactatcaa ggcttagagc gttttgccgc gcgtaagaaa attgtggcag
     1741 attttgaagc tcttgggctg ttagatcaaa tcaaaccaca cgacttaaaa gtgccgtatg
     1801 gcgaccgtgg tggcgtgccg attgagccga tgctgaccga ccaatggtat gtgtctgtca
     1861 aacctttggc ggaagtcgcg accaaagcgg tggaagacgg cgaaatccaa ttcgtgccga
     1921 aacagtacga aaacctgtat ttctcttgga tgcgtgatat tcaagactgg tgtatctctc
     1981 gccaattatg gtggggacac cgcattccag cgtggtatga cgagcagggc aatgtttatg
     2041 tagcacgaga tgaagcggaa gtgcgtgcga aacacaactt acctgcggac ttaccattaa
     2101 agcaagatga agacgtactg gatacttggt tctcgtctgg tctatggacg ttctcaacgt
     2161 taggctggcc agaacaaacc aaagaactga aaatgttcca cccgaccgat gtgctgatta
     2221 ccggttttga catcatcttc ttctgggtgg ctcgtatgat tatgttcacg atgcacttca
     2281 tcaaagatga aaacggcaaa ccgcaagtgc cgttcaaaac cgtgtatgta acaggcttga
     2341 tccgtgacga gcaagggcag aaaatgtcga aatcgaaagg gaacgtgtta gacccgattg
     2401 atatgattga cggcatcagt ctcgacgatt tgctcgaaaa acgtacaggt aatatgatgc
     2461 agccacaact ggcagaaaaa atcgctaagg caacccgcaa agaatttgcc gaagggattg
     2521 tggcacacgg cacagacgct ctgcgtttca ccctcaccgc ccttgccagc aacggtcgag
     2581 acatcaactg ggatatgaaa cgtttagaag gctaccgcaa cttctgcaac aaactgtgga
     2641 atgcgagccg ttatgtgctg accaatgaca agttggattt aagcgaaggc gacgtggaat
     2701 ttagccttgc cgatcgttgg attgaaagcc aattcaaccg cacggtggaa actttccgca
     2761 ccgcactcag ccaataccgt ttcgacttag tggcaaatgc gatctacgaa tttacttggg
     2821 atcaattctg cgactggtat ttagagctga ccaaacctat tttcttcaaa ggcacagatg
     2881 tacaacgccg tggcgcaagt cgcacgctgg tgaatgtatt ggaaaaactc ctgcgtttaa
     2941 tccacccagt aatgccgttc atcaccgaag aaatctggca gaaagtgaaa ggctttgtag
     3001 gtattgaagc cgataccatt atgttgcaaa aattcccaca atttgacccg cttgccattg
     3061 atgaaaccgc cgaaagtcaa atcaacttta tcaaagaagt gattgtggcg gtgcgtaaca
     3121 ttcgtgcgga aagcaacatc gcaccaagca aaggtttaga tttaatcgct cgtaatttct
     3181 ctgcggacga agtctctatt ctcaacgcta acgaagtgtt gctcaaatcg atggcaaaac
     3241 ttgatagcgt gaaagtgctg gaaaatggtg aaaatgcacc gctatcggta gcgaaactgg
     3301 tcgcaaatgg tgagatcttg atcccaatgg caggctttat caacaaagaa gctgagctag
     3361 ctcgcctcac caaagagatg gataaactta aaggtgaagt ggctcgcatt gaaggcaaac
     3421 tttcaaacga agcctttgtc gccaaagccc cagagcaagt catcgccaaa gagcgtgaaa
     3481 aaatgcaaga gtacctgagt ggattagaga aattgcaggt gcagtatcaa gagattgaag
     3541 cactgtaatt aactaacaag cggtcaggat ttggaaattt tttgctaatt cagaccgctt
     3601 gcttattgaa gcttttcatt ataaatgttt ggttaaaatc gcctctaggc ggtcatagcc
     3661 tgcttgggtg aagtgtaatc catcgtggca taaagttaga tctaaattcc cttctttgtc
     3721 agcaaaatat tcccacgttt ttacataagt caaatcagat ggaatatttg cctcaaaata
     3781 cgcattgagc tcttttattg cagcattatt ggtggtggta atattattaa ccggtgtggc
     3841 ttccaataga aaaaagttgg catttggatt aattttgcga agagaatcca caatttcgcc
     3901 aatccactct aacacttgtt ttggcgagta atccggctct tttacaatgt cattaacgcc
     3961 tagaaaaata aatacattat cgccaacgtg ttgaattcgc tcttgtcggg taatcacatc
     4021 caaatattgg cgggtgctgg tgcctgataa gcccaaattg gcaactgttt ttcctgctaa
     4081 attcggcgtg ccgttttcca tatcgcccca catatcaaac agggaatgcc caataaggga
     4141 aatatctgcc tgtttttcaa attctgattt ttttgtttgg tagcgattaa aaatatcttg
     4201 atcggtaagc ataggttctc cttaaatata aatgaaaaat cgctccatta ttatacaaac
     4261 ttgtaaacat tcactccaag atattttgaa gaaaaatcca ataaaaaagc cacttaatat
     4321 cgaattaagt ggctcaaaaa gattaattac acatcataag tggtcgatgc ggtattaccg
     4381 ccacgtcctg tccagttggt gtggaagaac tcaccgcgag ctttgtctgt acgctcataa
     4441 gtatgagcac caaagtagtc acgttgtgct tggagtaagt ttgccggtaa acgtgccgag
     4501 gtgtagccat ctaagaaggt aatggctgac gccatacaag gtacaggtaa accgatttcc
     4561 accgattttg ccactacttt acgccaatct gccaagcagt tttccaaaat atctttgaag
     4621 tatgggtctg agcctaagaa cactaaatat gggttggctt catacgcatc acgaatgttg
     4681 cctaagaaac ggctgcggat aatacaacct tcacgccata atagggcggt attgccgtag
     4741 ttgatgtccc aaccgaattg ctcagaagcc tcacgaatca acataaagcc ttgtgcataa
     4801 gagatgattt tggaagcaag taacgcacgg cgtaccgctt ctacccatac ttttttgtcg
     4861 ccttcaactt taccaatttc tttgttaaac aatcttgaag ccgcaacacg ttgatcttta
     4921 aacgcagata cgcaacgggc gaataccgac tcggtaatca gtgttaatgg aatgccgaaa
     4981 tcaagggcgt taataccagt ccatttaccc gttccttttt gacctgcggt gtcgagaatt
     5041 ttctctacca atggctcgcc gtcttcgtct ttgtaggcaa gaatatcagt ggtaatatcc
     5101 accaaatagc tgtctaattc ggtgtttttc cactctttaa agatttcgtg catttcatca
     5161 tagcttaaac ctaaaccatc ttttaagaat tggtaggctt cacaaattaa ctgcatatcg
     5221 ccatattcga taccgttgtg aaccattttc acaaaatgcc ctgctccgtc acgaccaacc
     5281 cagtcacaac aaggctcacc tttgtcggtt ttggctgaaa ttgcttggaa aatcggcttc
     5341 acatattgcc acgcagattc atcaccgccc ggcataattg acggcccgtg acgagcaccc
     5401 tcttcgccgc ccgatacacc tgagccgata aagcgaatgc ctttttccgc taacgctttc
     5461 acacggcggt tggtgtccgg atagtttgag ttaccgccat caatgatgat gtcgccttct
     5521 tctaaatgtg gcagaagagc ctcgataaac tgatccacca cctcaccggc acgcaccatt
     5581 agcatcactt tacgcggttt ttccaacttc gccgctaaat cttctaacga gtaagcaccg
     5641 ataatgttcg tgcctttcgc cgcaccttct aagaactcat ccacttttga agtagtgcgg
     5701 ttgtacgcca ccactttaaa gccgttgtca ttcatattca aaattaaatt ttgacccatt
     5761 acggcgagtc caatcacgcc gatatcgcct ttttgtgaca ttgtttgctc ctattgtttt
     5821 tgattctatg caagcggtcg aattggtaaa attttttgca aatttgaccg cttgtaacat
     5881 ttattaacct aaaataaact ccaccgccat ttggctgtgt aatgctgctg tatcgaaaaa
     5941 cggtaacgga ttgtcgtttt ggttaatcag caacccgatt tcggtacaac ctaaaatcac
     6001 accttctgca ccttgttcac taagttgttg aatagtctga agataaaacg ctttggcact
     6061 ttcagtaatc ttgcctaaac agagttcctc gaaaataatg cgatgaattt cttgttgcgt
     6121 ttcctcatct ggtactattg atgtgatacc acgctccaat aaaccgtctt tgtaaaaatt
     6181 atcactcata gtaaattttg tgccaaggag tgctactttc tgcagacctt gagctgaaat
     6241 cgcctcagcc acacagtcca aaatatgcaa aaacggcaca gagatatggc tactaatttg
     6301 atcggcaatt ttgtgcattg tgttggttgc caataaaatg ccttctgctc cggcttgttc
     6361 tagcaatcta gcttgttcag ataaaatttc agcggctgct tgccaatttc cctgcttttg
     6421 gcattgtaca atctcttcaa aattgacact cgaaattaaa atcttggcac tgctatttcc
     6481 acctaatact ttattcaccg agcgattaat atctaaataa taagaaaccg tgctttccgc
     6541 actcattcca cctaaaatgc cgagtgtttt cattaatata ccttattgat tttccgctaa
     6601 cttttctaaa atgcggctca ttgataaatc cattttagaa aaagcgaacc atttcttacc
     6661 taaatcttta agtgatgcac cgatatgata aagctctttt tcatcaataa tcaaaaatcg
     6721 ctcgtgagat ttatcaaata ttttcacatt aatgtgagca tattggctgt tatatttttc
     6781 caaatctaat gcaagttgct tagatatttg tttcgtataa atcgtaactg atacgttatg
     6841 cgatcgtttc gtaaataaag ttaaaacggt atcatctaca tagttatcaa ttaaaatcag
     6901 cgatgatttt gcacctctca ctaattccgt aacaaactga taagcgttaa aggtttcacc
     6961 ttcaaagaaa accccttgca ttttaggctt attgccttca agagattgaa acacctgctc
     7021 taactgccca gacatctcca actgtttacg ctctacactt tctaagcgtt gtaccaaacc
     7081 actatttgtt tgcaaaagat gacgcatttg cacaaaggct tgcataatct taatgctaac
     7141 ttgcaccgca acttcactac gcaatactgc cgaaagcatt gcaatgcctt gctcggtaaa
     7201 gacataagga agatatttcc tatgttggcc acgcccacta ttttcgttta agatcacaaa
     7261 ttgtgatctt aaagatagcc attcgttttc tgttaattga aaacgaaata tgtcaggaaa
     7321 tcgctcttca ttccgtttta ctgcttggtt aaaggttcga gtatctacct gataaagctc
     7381 tgccaaatga acatctagca ttacttgctc gccacgaata gtaaaaattt tagagttaat
     7441 gtttggttca attaattgaa ttggattcat ctttcttcct tattcttcag tgaagatcac
     7501 ttttgtgatc tcaaaataag aaagactatg ccaatttttg gcctatacca cgagcagatt
     7561 tttctgcttt ttcgatgaat atcacaaaaa tactttgcaa catttttcta aaatttaacc
     7621 gcttgtaaag gtcactgatt gtgacctaga gtaagttagc cgcctcacta tccaaatacc
     7681 attccgttac cccattttcc gcctgaattt tggcggcagg ataaggtaaa ttttctgccg
     7741 gagtggtttg gatttctttt aaaatttccg ctttgcttgc tcctgtgacc aagtaagtga
     7801 tccgtttggc tttttcaatt aaagatgccg ttttggaaat gcggatctgc cctgtttctg
     7861 ggtatttggc gatcacggca acgttctgat cattaaaatc tgtttgatgt gggaacagtg
     7921 aggcggtatg cccgtctgtt cccattccta aaataatcca atcaaacgcc aagttcggca
     7981 cacaagcggt caattctgcc gaaaatcttg caagttcttg ttctacattc tcttcaccac
     8041 gaatgcggtg aatattttcg cttggaatgt cgatgtgatc gaacagtaat ttctgcactt
     8101 cgccgtagtt actttcggga tcggttgggg caaccattcg atcatccccc caccagaaat
     8161 gcaggttttg ccattgaatt tcggtattaa acggtgcttg agctaaggtt ttgaataata
     8221 atttgggggt tgaaccaccg gaaagggaaa tatgcaccgg gcggttttga tggctgtatt
     8281 caataaactc tttagcaatt tgttcaaccg cagcttgggc ggtggggaaa ataactttat
     8341 tcataatttg cctcgttaga tcacccctct ttagaaaaga ggggaggggg agatttgatt
     8401 acgatttcaa tatttcgtat gagcgtatat aacttctgcc aaatctcccc tagcccctct
     8461 ttgctaaaga ggggaactga aatttacact ttcttcttca ttgtaccgga cggttttcgc
     8521 catactttgc cgtgtctggc gattaattta tctgcctcgg ttggccccca agtgccggat
     8581 tcatattcat acacacgccc acgattagct ttgtaggcta aaatcggttg cacaaatttc
     8641 caacaagcgt gtacagcatc agtacgggca aataaggttg catcaccttt aagtgcgtct
     8701 aatagtaagc gttcataagc ggtgagtaag cttgatgatg aacttaaatc agaatagcgg
     8761 aaatccattg agacttcttt cgcttcaaag cctgctcccg gttttttcaa gccgaaacgc
     8821 attgaaatgc cttcgtccgg ttgcacacga ataatcaatt tattttccgg agcattttgg
     8881 ctaaataccg ggtgtggtgt agttttaaaa tgaattacga tttccgtcac acgggttggt
     8941 aagcgtttac cggttcgcac atagaacggc acacctgccc aacgccagtt atcgatttta
     9001 cattttaccg ccataaaggt ttcagtgttg gaatcagccg gcacgccttt ttcttccaag
     9061 taagccggca cttctttgcc gtctaccgtg ccacgagcat actgacctaa caccacattg
     9121 tgtttaacgt cttcttcagt taacggatgc aagcaatata gcacttttgc gacttcatca
     9181 cgcattgaat tagcattaat aattgccggt ggctccattg caaccatggc taatacttgc
     9241 aataagtggt tttggaacat atcacgcatt gcccccgagc catcatagta accgccacga
     9301 tcttcaacgc cgatggattc tgccccggta atttccacat aatcaataaa attacggttc
     9361 caaagcggtt caaataagcc gttagaaaaa cgtaaaacga gtaagttttg taccgtttct
     9421 ttacctaaat agtggtcgat acggtagatt tgatgctctt caaagcattt gtggatttgt
     9481 acgtctaatt ttttggcggt ttcgatatcg tagccgaatg gtttttcaac aataatccgt
     9541 ttccagccaa actcttcggt agttaagccg tgagcggcta aacattccgg aatcacgcca
     9601 tataaacttg gtggcgtgga gaggtaataa agcgtgttac cggctgtttg atatttatcg
     9661 tgtagctcat caagacgagg cagcaacttg gcataatcca ctgcatcaga ggtatttaca
     9721 gcttggtaat aaagatgttc gcaaaattta tctaattctt caccgcttgc tttttcaaat
     9781 ttgactaacg catcacgcat tttttggcgg aaagattcgt cggttaattc tgaacgagaa
     9841 acacctagga cggaaaaatg ctcgcccaat ctgccaatct tatataagtt ataaagagca
     9901 ggaattaatt tacgaaaagt taagtcaccg gaagcaccaa aaatgacgat acagctattt
     9961 tcagcattca tttatttatc ctattgctaa ttgttaaaat tttgttgggt gcaagattat
    10021 cataaaaatt gctaatcgga actacctatt tgaataaaaa tattttatcc caatctatcg
    10081 agccgtcagc caccatcaca aaataaggat taatcaaact ttctcgctga ttataagtca
    10141 gcggcgaaaa attaaagtcg aaaattttgc cgcccatttc acttaacagc acttctgcca
    10201 cagcagtatc ccattcgccg gtgtcaccaa aacggatata acaatcggct ttcccttctg
    10261 ccactaaacc ggcttttaga ctgcccgaac catattttac acactcaatt tgtggggctg
    10321 aaatggcatt tttagcttgt tctgcatgta aatcgctgcc tacggtaaca atcaaaaggg
    10381 cattctccgc acgtttcggt ttgacaagcg gtcgaatttc tccattttct tgcaaaaagc
    10441 taccgctacc ttccatacta aaataggttt ttcctaatat cggagcatga ataacgccca
    10501 gcaccggctg atttctaccc tcacgttttt gcactaacgc aatcaccact gaaaattgac
    10561 cggtgcggtt aataaactgt tgtgtgccgt caatcgggtc gataatccaa tattcttgcc
    10621 attgttggcg ttcggcaaac ggaatatcgc aaaactcttc cgataatacc ggaatatctg
    10681 gtgtgagttg cttcaagcgt tcagttaaaa attggctgat aatcagatcc gcttccgtca
    10741 ccggtgtgca atcggctttg attttaattg ccaccgagcg ggcataaagc tgctttaact
    10801 gctcaccggc tgctttggca atattgataa tattctcgag taggggttga gttagcgttt
    10861 gcataatagc tccttgccta tttttttaag tattctcgta gcataaatag agcggacaaa
    10921 ttccgtgctt cggcaaaatc aggatctgcc aataattgat caattttatc caacggataa
    10981 cgcacaattt ccagcggttc aggctcatcg ccttccaatt ttgatgggta cagatcttgt
    11041 gccaaaaaca ggtgcattaa gccgtacata tggcttggcg aactgtaaag cgaccgcaga
    11101 aaatctaatt ttttcgcccc aaaaccaatt tcttcttgta attcacggtt cgcactctca
    11161 atcggctctt cacctgcatc cacaatgcct ttcggaaaac ccagctcgta acgctccgag
    11221 ccgaccgcat actctttcac aaaaatcagc tcgttgtttt gaatcggaat caccattacc
    11281 gaagaacggc gattcggcgt aagtcgttcg taagttcgct cttcgccatt agaaaagcgt
    11341 aaatcgaccg cttgcacctc aaaaatgcga gatttcgcta ctgttttaat gttcaaaatt
    11401 tcaggaagtt gttttatcat tttatctcac ctttttgagt tattttagtt gaaaaatctc
    11461 actttcgctc taatatttcg actattgttt tgattttaag gcagaaaatg aaaaataaac
    11521 acgaaaaaga acaaaacgac gccgaagttc ggctagataa atggctttgg gcggctcgtt
    11581 tttataaaac ccgttcgatt gccaaagcaa tgattgaagg gggtaaagtc cattataatg
    11641 ggcaaagagc taaagttagc aaagcggtgg agatcggtgc catcatcaaa cttcgccaag
    11701 gcaatgaaga aaaagaggtg gaagtgttag ccctcagtga ccaacgccga ggggctccgg
    11761 aagcccaact gctctacagt gaaaccgaaa aaagcattaa acaccgtgag gcaatggcat
    11821 ttgcccgcaa agcgaatgct ctttcaatgc cacaccctga tcgccgtcca aacaaaaaag
    11881 aacggcggga tttaatcaaa ttcaaagagc aagaatttag ctaagccctt gcaatcagaa
    11941 aaataatccc tatattgaat atcctaagta ggggcgaaaa atttttcgcc cctatataat
    12001 tatttcgggc gaacattgat tcgcccctac agcgttcgat ttgcacattt ttagccacaa
    12061 aatgcaatgc attttgaacg ttggctttgc caacggctcc gtaggagcga acaaaattag
    12121 aaataatttt gtgagtaata atcgaccgct tgcaacgagg aatcaaaatg aattacacca
    12181 aagacaatga caaactctac cgctatttat tcaaagaccg agcggtacgg ggcgaatggg
    12241 tgcgtttaaa caacaccttt accgagacct taaacaccca tcactaccct aaagcagtac
    12301 aaaatttact cggagaaatg ttagtcgcaa ccagtttgct gactgcaaca atgaaattta
    12361 acggcaacat tactgtgcag attcaaggtg acagcccgtt aaaattggcg gttgtgaacg
    12421 gtaacgacca acagcaactc cgtgctttag cccgtgttca ggcagatatt gcagacacag
    12481 cctcgttagc ggaaatgatc ggcaatggtg tattagtgat ttctattatc ccaaccgatg
    12541 gtgaacgtta tcaaggggtg attgctctcg ataaaccaac cattcgtgaa tgtttagaag
    12601 attacttcgc ccgctccgag caattacaaa cccacctcgt tatccgcaca ggcgaatttg
    12661 aaggcaaagc agtggcaggc ggtatgttgc tacaaattat gccggacggc acaggctcaa
    12721 gagatgattt tgagcattta gccacgctca ctgaaaccgt aaaagatgaa gagttatttg
    12781 gtttagaggc agaagaattg ctctatcgcc tctaccacga agagcaagta gaagtttacc
    12841 caccacaaga tactgaattt aaatgtggct gctcaagaga gcgttcaggc tccgcattat
    12901 tactggtgcc ggcagaagaa atcgaagaaa tgttggagga aaaacaaggc gtgatcgata
    12961 tgcaatgtga atgctgcggg acacaatatt tctttgacaa agcggcgatt gaaggcttta
    13021 aggaagaaac tgaaaaatta agtaagttag ggttaaatta agctaaacaa gcggtcaagt
    13081 ttcttgtctt ttttgcaatt tgtaaaaaaa cggtgaaatt tgaccgcttg cattttactt
    13141 atttgagcct tctgggtgta acccaatccc tttgtggcgt tcttttagtt tagcattgat
    13201 ctctgcccac gagagatcgg cattgtgcaa taacaccgtt aagtgataca tcagatcagc
    13261 cacttcaccg accaactctt cccgatcatt tttcattgcc gcaatcacgc tttctactgc
    13321 ctcttcccct actttttgga cgatttttgg cgtgcctttg gcgtaaagtt tagcggtata
    13381 agaactttcc ggatcagcat ttttacgttc ggctatcatt cgttctaatt tgctgaaaaa
    13441 gatccaatct ggttgttctt gttcaaactg atgaaaacag ctctccgccc ccgtatggca
    13501 ggtttcgccg atagggttag cgaggattaa cagggtgtcg ttatcacaat ccaaactcat
    13561 atccaccacg tttaggaaat tgcccgaggt ttcgcctttc gtccacagcc gttgtttagt
    13621 acgggagtaa aaagtcactc gcttttcagc cagcgttttt tcgagggctt gttggttcat
    13681 atatcctaac atcagtactt cgcaggtttg ggcgttttgg acgataacgg gcagtaagcc
    13741 gtccactttt tgccagtcta ttttattttg cattttttct tccttttttt gaccgcttgt
    13801 ttagacatat aggcttattt caatcaaatt accatcaggg tcacggcaat aaaccgactc
    13861 aatttttccc actgcccccg tacgaggcac aatcccacct tccaaaatct ccacctgatg
    13921 tcgctgtaac acatagataa cctcctgaag tggagttacc gttaagaggc ataaatctgc
    13981 cgtgccacaa tcggcatttt gggcattggg taggatttct gcaccttttt ggtggaggtt
    14041 gattttctgt gtgccaaaca aaagcgcttt gcgattatcg ccaaaggtga tttcttgcat
    14101 acccaaaatg gtcgtataaa aatcaatggt tttttgcata tcggcaacgg ttaaaaccag
    14161 atgatctaag gcagtaatct taatcatcta cgcacctcaa ccccttcctt cgccaaatat
    14221 tccttcaact ccccaatatt gataatttgt ttatgaaaca cactcgctgc caacgcacca
    14281 tccacatttg cctcaataaa agcatcacgg aaatgcacca tttcgcctgc accgcctgag
    14341 gcgatgagtg ggacttggca aacttcacgc acttttttca gttgcaccaa atcgtagccg
    14401 ttgcgtacgc cgtcttggtt catcatattc agcacgattt cgcctgctcc tcgcttttgc
    14461 acttcctcca cccaatccaa caattgccat tcggtttggc gggtgcgttt ttcatcgccg
    14521 gtatattgat tgacccaata tttgccggtt tctgcctcga accagctatc aataccaacc
    14581 accaccgcct gcacgccaaa gcgctttgcc agttcggtaa tcagctcggg gttggcaagg
    14641 gctggggaat tgatggagat tttgtccgct ccgaaagcga aaatctgctc cgcatcggca
    14701 atggttttga ttccgcctgc cacacagaac ggaatatcaa tcacctgtgc cacacgttcc
    14761 acccagcttt tatccaccgt tctgctgtca cttgaggcgg taatatcgta aaacaccaac
    14821 tcatccgccc cctcttgggc ataacgctgg gcgagtggca caatgtcgcc gatgatttcg
    14881 tggttgcgga actgcacgcc tttcacaact tgcccgtcac gcacgtctaa acaaggaatt
    14941 atccgttttg ccaacattcg attgcctccg ctacattaaa tttaccttcc aacaacgcac
    15001 gaccgacaat cacgccagcc acgcccgtac cacaaagcgc tttgatgtcg gcaagcgagc
    15061 cgataccgcc tgaggactga aattgaatct ctgggtattt ggcacagatt tctcgataga
    15121 gatctacatt tgaacctgcc agcgtgccgt ctcgggaaat gtcggtgcat aaaacgtgtt
    15181 gcaagcccac ggtttgataa tcttcaatca actcctcgag cgacacacca cttgcctctt
    15241 gccagccgct catcgcaatg attttttgac cgattgcatc aatgttcaca tccagtgcca
    15301 gcacaaattt ctccgcaccg tactttttga accagccttt aaccatttca cgctctttta
    15361 ccgcagtcga accaatcacc acacggtttg ctccaacagc aagtaaatcc gccacatcct
    15421 gctcggtgcg gataccgccg cccacttgaa ttttgcagtg ggtttcacga ataattttgc
    15481 cgataagtgc ggtctgtctt tgagccggat ttttcgcccc tgtaagatcg accaaatgta
    15541 actgctccgc cccttgtgcc aagtagtcgg caaattgggc aatcgggtca tcggcataag
    15601 tcgtctgttt cgcataatcg ccctgatgta ggcgaactac ttgcccatcg ataaggtcga
    15661 gggcggggat aatgatggat ttttgcatat tattgttcct gtgtgcctag cacgagccgt
    15721 gctaggctga ataatcccag tcgcgctgcg actgcctctc taagctacgg agtagcttgg
    15781 tttatctagc cccatacggc tcgtatgggg tacaagcggt caaattcttc caaaaacttg
    15841 caaaaaaccg accgcactta tttcttcacc tgtttcgcca cttgttcaat caccgcagcg
    15901 aaatcaatcg cattttgttg cgtaatcacc ggtttgccgg tctctgcctc caaactttcc
    15961 cgagccactt ttgcaacatt tccgccccgt ttggcaacgg ttttattttc ttccaagccc
    16021 tgtgggtggc tgatttgagc gatgtctttg gtggcagcct cagcaagcat attcagcacc
    16081 aactcggtgg tcgtcatatt gtctcgcaga ctttcctttt tcagcccttt gaaatcctta
    16141 tattggcgag tagtcatacc gctccacgcc tgtgtgattt cattggtgag aatcgcaaat
    16201 tctctgccca cttgcacacc gtgatcttgc caagtatccg tcagttcttt tcgcacctga
    16261 atggcttgca agcgttggtt aatccactca cgggaatatc cctttttcaa gtaagtagcc
    16321 aaagctcggt caatggtcaa ttcaggatcg ataatctcat caatccgctc tttgcctacc
    16381 tctgccagcc acattttcaa cggctcggct ttcgggcttg gcacagactg aataatacgg
    16441 aaaatgcctt gtaaatccgt ggcatcggtt tcccgcattt ttccgtctgg ggcttttaat
    16501 ttcaactgta cgattttttc gtacagttca attccgccct cttcgtcctt gattttccgc
    16561 tttaaatcac tccaataacg gcgtggattg ctactttgcg tcagcacctc gataatgtcc
    16621 accaccgaga aaaaccactc ttctttttcg ctatcccaca ccgagcggat ttggctgttt
    16681 tcaaatagtt taatttcgtt catttctcac cttctttcac tggttaaatt aacagtaatt
    16741 ttgtcgaaat aaagcgagaa atcaagccct attttcaaac ttttcgatcg agatcacaaa
    16801 atcagacatt ctccacaaaa ttcctgagca acttcgcccc agcctcgccc gaacgctcgg
    16861 ggtggaactg tacgccgtag aagttttggc tggcaatggc agcggaaaac ggcacgccgt
    16921 agtcgcaggt ggcgatggtg ttctcattcg gtagcacacc gtagctatgc acaaaataga
    16981 aatgattgcc ttgctcaatg tcgtgaaata gcggatggtc ggcttggtat tgcaccttgt
    17041 tccagcccat atgcggcaac ggcaaaccgc attcaggcaa gcgttcggtt ttgccactca
    17101 ttaagttcag tgttgccaca tcgccttcgt gggaaaagtc cgtcattaac tgcattccta
    17161 agcagatgcc aagcatcggc tgggtggcgt tgcgaatggt gtcgataagt cggcgatcgt
    17221 gcaagatcgc catcgccgcc gctgctgttc ccacaccggg gagtagcaat ttatcggcag
    17281 attggatttt gttgagatct cgcgagatct cagcccgaat gccaagacgg tcaaaagcaa
    17341 atttgaccga agacaggttg gcacagcctg tgtcgatgat ggtgaggttg gtcatttagt
    17401 ttcctgagtt aagtatttct tatagtgaag taaaattgac tcaatatatc tgtttccttc
    17461 aaaagctttc ttatcgaatc t
//
LOCUS       DANLXD010000052        17460 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.052, whole genome shotgun sequence.
ACCESSION   DANLXD010000052 DANLXD010000000
VERSION     DANLXD010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17460)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17460)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17460
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.052"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(427..2544)
                     /gene="spoT"
                     /locus_tag="PXD18_001437"
     CDS             complement(427..2544)
                     /gene="spoT"
                     /locus_tag="PXD18_001437"
                     /EC_number="3.1.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional GTP
                     diphosphokinase/guanosine-3',5'-bis pyrophosphate
                     3'-pyrophosphohydrolase"
                     /protein_id="HDL6301871.1"
                     /translation="MYLFEPLDRIIQGYLPPEQIERVKRAYVIARDAHEGQTRSSGEP
                     YITHPVAVASIIAEMKLDQEAVIAALLHDVIEDTPYTEEELAAEFGQSVADIVQGVSK
                     LDKLKFRTRQEAEVANFRKMILAMTKDIRVVLIKLADRTHNMRTLGALRPDKRRRIAK
                     ETLEIYSPLAHRLGIEHIKNELEDLGFEAMHPQRYRVLKMAIASARGHRKELIQRIAD
                     DIRGRLEEVQIEARVYGREKHLYSIYQKMRQKDQHFHSILDIYAFRVVVDNVDNCYRV
                     LGQMHALYKPRPKRVKDYIAVPKPNGYQSLHTSMIGPHGVPVEVQIRTEDMDKMADMG
                     VTAHWRYKEGESHHNTTVQLKAQQWLQSIVELQNSAGNTAEFIDSVKSDLFSDDIFVF
                     TPKGRIVELPANATAIDFAYAVHSGIGDRCVGAMVDRNPYPLSEPLRTGQTVEIITEQ
                     GKRPNASWLNFVVSGKARAKIRQSLKNQQHDEAIALGRRQLVRAMNLRSLDELCSETI
                     QSVLDELRLSSFDELLAEIGLGNQMSNVIAQRLLGEPLLIDTDGNPENNQPLKIEGIE
                     NRLISFANCCLPIPGDEIIAHVSSGKGLAIHNACCGNVKDYATEPSNYLPVEWEIAKE
                     KAIQFETEIVLDIINEPGVLAGITSTLAKLNSNIGSINSEAREGNIYQVRVQISVENK
                     EHSELILRKLLSVKGVVKAARKQ"
     gene            complement(2654..2935)
                     /gene="rpoZ"
                     /locus_tag="PXD18_001438"
     CDS             complement(2654..2935)
                     /gene="rpoZ"
                     /locus_tag="PXD18_001438"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HDL6301872.1"
                     /translation="MARVTVQEAAEKIGNRFDLILIAARRARQLQLHTREPLVPEEND
                     KPTVIALREIEEGLITTDIMDQLENHDSIKQEAAEQEAISFLTEMSNEA"
     gene            complement(3038..3535)
                     /locus_tag="PXD18_001439"
     CDS             complement(3038..3535)
                     /locus_tag="PXD18_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDL6301873.1"
                     /translation="MAHFYEYLEFNSDEDRENQLEVYVEVKLSTDTEEKLQAVGVQGD
                     WLVMAEPYCPDCVEIVAYFQRMAKLNPNIKVKYVARKDNQERKHFDSDEQQQAVISAQ
                     KIPTIFDIRNGKTELVLSEFPQFLKDKMAANPEQFEQLKADFRMGKFGKEVEAELLAI
                     LLNTK"
     gene            complement(3560..4582)
                     /locus_tag="PXD18_001440"
     CDS             complement(3560..4582)
                     /locus_tag="PXD18_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005825060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL6301874.1"
                     /translation="MSVTKKRLTLSDIAELSGVSKTTVSMILNGRGNDFRIKSETCQK
                     VKEIAKKHGYRANVYAKSLQAQRTNVIGLVIPDLTNYGFALTSRTLEKLCRENGLQLV
                     IACSDDTFEGEKKAIERLLDRQVDLLITAPTHNEPTYYQNAAQYTPMLQLDRYISGLN
                     IPSITSNDTQSISMLVENIVRAYHLKEFFYLGGQLSLSPSQNRLKGFREGLEQSHLAL
                     DENWVLHQDYQPESGYQMFAQIVEKLGRLPEAVFTASFTLLEGVMRYLTEHQQMDKLL
                     TQELHLATFDDHHLLNALPFHIHSIKQDHQQIAERTFELIQQKLAQQKIDDVKVDCEI
                     LWRKSI"
     gene            complement(4622..6052)
                     /locus_tag="PXD18_001441"
     CDS             complement(4622..6052)
                     /locus_tag="PXD18_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 32 protein"
                     /protein_id="HDL6301875.1"
                     /translation="MHIFNNGKYKSLHAQSEGELNALRQTVLSDPDFYPTYHLAPETG
                     LFNDPNGLIFDGEKYHIFAQWFPYGALHGMKHWQHFITTDFQTFSKGDLLIPDELFES
                     HGCYSGGAILWQDKIVAFYTGNTRRPSDNARIPHQNIAIFDKSGKLLEKRCIIDQAPA
                     GYTEHVRDPKPYLTAEGKIRFVLGAQRENLTGTALIYEMDDLNATPRLIAELEVHNFD
                     NSNVFMWECPDLFSLGGKDLFVWSPQGKLRESHQFQNNYHATYALGELNGNRLRAEHI
                     EELDYGFDFYAPQTVENSDRILFGWVGLPDLTYPTDKYQWHSMLTLPRKLSLQNGKVI
                     QNPIVNVGELQAVEMSENFAIENLDTAYLQISVENQPLVLDFFSNEQGQKLSLRFENG
                     VLSLDRSQTEQTELMEKFGSVRHCKIEQLETIEIFFDRSVVEIFVNGGEKVLTSRFFI
                     AKRENVVKSSRPIQVKVAKVLPISVE"
     gene            complement(6157..7080)
                     /locus_tag="PXD18_001442"
     CDS             complement(6157..7080)
                     /locus_tag="PXD18_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoimidazole riboside kinase"
                     /protein_id="HDL6301876.1"
                     /translation="MSKIWVTGDAVVDLIPDGEHHYLKCAGGAPANVAVGVSRLGVEA
                     GFIGRVGNDPLGKFMREVLQAENVCTKQMILDAQHRTSTVIVGLDNGERSFTFMVNPS
                     ADQFLEIGDLPEFNQGDFLHCCSIALINDPSRSTTIEGIRRVKKAGGYVSFDPNLRES
                     LWKSLDEMKTVVNSVVAMADILKFSEEELTLLTETETLEQATQAITAQYPEKLIIITL
                     GKDGAIYHFNGKSQVVAGKALKPVDTTGAGDAFVSGLLAGLAQTPNWHDETVLVEVIR
                     KANASGALATTAKGAMSALPNKAELDAFLAE"
     gene            complement(7197..8624)
                     /gene="miaB"
                     /locus_tag="PXD18_001443"
     CDS             complement(7197..8624)
                     /gene="miaB"
                     /locus_tag="PXD18_001443"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HDL6301877.1"
                     /translation="MAKLHITTWGCQMNEYDSSKMADLLNSTHGFELTENPEDADVLL
                     LNTCSIREKAQEKVFSQLGRWKNWKKDKPNLIIGVGGCVASQEGEHIRDRAPYVDIVF
                     GPQTLHRLPEMINQIRGGKSSIVDISFPEIEKFDRLPEPKAEGPTAFVSIMEGCNKYC
                     SFCVVPYTRGEEVSRPVDDVLFEIAQLAAQGVREVNLLGQNVNAYRGETFDGGICTFA
                     ELLRLVAAIDGIDRLRYTTSHPIEFTDDIIEVYRDTPELVSFLHLPIQSGSDRVLTMM
                     KRNHTALEYKAIIRKLRAVRPEIQISSDFIVGFPGETAEDFEQTMKVIEQVNFDMSFS
                     FIYSARPGTPAADLPDNVSDDEKKERLSRLQQRINHQAMQFSRAMLGTEQRILVEGPS
                     KKDLMELTGRTETNRVVNFVGTPDMIGKFVDVKITDVYTNSLRGEVIRTEDQMGLRVV
                     ESAESVIARTRKEDDLGVGKYVVNL"
     gene            complement(8841..9341)
                     /gene="crr"
                     /locus_tag="PXD18_001444"
     CDS             complement(8841..9341)
                     /gene="crr"
                     /locus_tag="PXD18_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005702996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HDL6301878.1"
                     /translation="MGLFDKLFGSKQKESQEIKIYAPLTGEIVNIEDVPDVVFSEKIV
                     GDGVAIRPSGDTIVAPVNGTIGKIFETNHAFSIESEEGVELFVHFGIDTVELKGEGFT
                     RLAQEGQTVKVGEPIIKFDLALLEGKAKSVLTPIVISNMDEISNLSKLNGQVVAGESV
                     VLTLTK"
     gene            complement(9426..11147)
                     /gene="ptsI"
                     /locus_tag="PXD18_001445"
     CDS             complement(9426..11147)
                     /gene="ptsI"
                     /locus_tag="PXD18_001445"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-protein phosphotransferase
                     PtsI"
                     /protein_id="HDL6301879.1"
                     /translation="MITGIAASPGAVFGKALVLKEEPIVLNTRKITESEVEAEKAKFF
                     TGREKAAAQLTAIKEKARRTLGEEKEAIFEGHLMILEDEELEEEILSYLTDNLVTADV
                     AASKVIEMQASMLAEIDDEYLKERAGDIRDIGNRLVRNILNMNIVDLGDIQDEVILVA
                     YDLTPSETAQLNLDKVLGFITDVGGRTSHTSIMARSLELPAIVGTNNVTSLVKTGDFL
                     ILDAVNNEVHLNPSEEKIANFKALQEKLNAEKEELAKLKELPAQTLDGHKVDVAGNIG
                     TIRDVEGVLRNGGEAVGLYRTEFLFMDRTQLPGEEEQFQAYKEIVEAMNGQMVILRTM
                     DIGGDKELPYLDLPKEMNPFLGWRAVRIGFTRREILDTQLRAVLRASAFGNLAVMFPM
                     IISVEEIRLLKSIVAELKDQLRAEGHAFDENLKLGIMVETPSAAVNARHLAKEADFFS
                     IGTNDLTQYTLAVDRGNEIIAHLYNPLSPSVLNLIKQVIDASHAEGKWTGMCGELAGD
                     VRATALLLGMGLDEFSMSGISVPHVKKLIRSINFADAKALADEALAQPTAADIERLVD
                     EFYQKLN"
     gene            complement(11269..11526)
                     /gene="ptsH"
                     /locus_tag="PXD18_001446"
     CDS             complement(11269..11526)
                     /gene="ptsH"
                     /locus_tag="PXD18_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein Hpr"
                     /protein_id="HDL6301880.1"
                     /translation="MYSKDVVITAPNGLHTRPAAEFVKAAKGFASDITVTSGGKSASA
                     KSLFKLQTLGLTQGTTITISADGEDEQKAVDFLVDLIPTLE"
     gene            11787..13361
                     /gene="thiP"
                     /locus_tag="PXD18_001447"
     CDS             11787..13361
                     /gene="thiP"
                     /locus_tag="PXD18_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine/thiamine pyrophosphate ABC transporter
                     permease"
                     /protein_id="HDL6301881.1"
                     /translation="MLSTLTKTTAWFIYFSIIALYVFSLWALMDYHQNDTLFVFSDIT
                     ATVAYSLLQASLSAVISLFLGSLLARSFFYLDFKGKNLLYKTISFIWALPSLVIIFAV
                     IGVFGNSGWLAKLFQQLGWNWQFNLYGLHGIILAHCLFNIPFVMKYYTGGLQLTPSSR
                     FQLAAQLNLTGWNYIQIVELPIIKTLLPYMFMTVFLVCFTSFPIVLMLGGSPKYSTLE
                     VAIYQAVTFEFDFAKALILIGVQFVVGIGLQLVMNYISTSALKKLKQQPNRVEIWKPK
                     PTGLAKLGLQAVIFLQSFAIILPLVSVIWAGLSVSKLSERLLNPTLWQATQYSLYLSL
                     IASIFVITISYLIALEARQLLYTKAKLRYSILTAITLFPLLLPIFLLSVGLFILLMNS
                     ELSSEALLLLVGICNGLTLLPFIYPMLFSAMWNSLTSHDKLAQGLGLKGLRRWWIVEK
                     NQLIRPLVTVFALAMSSSLGSFTVIAFFGNADFSSLPYLLYQQLGSYRTEDAAVTALI
                     LMLFALLPFLFSKDKL"
     gene            13358..14008
                     /gene="thiQ"
                     /locus_tag="PXD18_001448"
     CDS             13358..14008
                     /gene="thiQ"
                     /locus_tag="PXD18_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter ATP-binding protein"
                     /protein_id="HDL6301882.1"
                     /translation="MIELDLHFTYEQMNMHFQLSVKKGERIAVVGESGAGKSTLLNLI
                     AGFEKAESQQSQLWLNQKNHLDTEVAQRPVSMLFQDNNIFPHLTVEQNIGLALVPSLS
                     LNPKQKAQVKQIATQMGIETFLQRQADQLSGGQKQRVALARTLLRDKPILLLDEPFSA
                     LDPQRRAELQQIVFDICQSRNLTLLMVTHQLSESLFLFNRVITVADGEIVSDLSPL"
     gene            14315..15729
                     /locus_tag="PXD18_001449"
                     /pseudo
     CDS             14315..15729
                     /locus_tag="PXD18_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605131.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sucrose transporter subunit IIBC"
     gene            complement(15845..16648)
                     /gene="map"
                     /locus_tag="PXD18_001450"
     CDS             complement(15845..16648)
                     /gene="map"
                     /locus_tag="PXD18_001450"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDL6301883.1"
                     /translation="MNNIPLRNEEEIQKLRVACKLASDVLVMIAPYVKEGVTTGELDK
                     ICHEYILANGATSASLGYHGFPKSVCISLNEVVCHGIPSDDKKLKKGDILNIDVTVIK
                     DGYYGDNSMMYVVGEPSVRDKRLMAVTLESLYVGIRTVKAGVRLKEIGTAIQKYVEKE
                     GFSVVREYCGHGIGTEFHCDPQVVHYATDDGGVVLKEGMVFTIEPMVNAGKKEVRLMG
                     DGWTVKTKDRSHSAQYEHQIVVTKDGCEVLTIRDEEIAEGRISRIMHNS"
     gene            complement(16734..17399)
                     /locus_tag="PXD18_001451"
     CDS             complement(16734..17399)
                     /locus_tag="PXD18_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HDL6301884.1"
                     /translation="MNFTTYFSDENKRRSLILLSLFHIFIIAISNYLVQISFEVQVPL
                     TEFSFPTTWGTLTFPFIFLATDLTVRVFGADLARKIIFVVMFPALVISYVISVLFFET
                     QFQGFSALTEFNFFVFRIALASFAAYLVGQLLDVLVFNSLRQGKRWWLAPTCSTIFGT
                     LIDTFVFFAIAFYKSSDEYMAEHWFTIGSVDYAFKLFVSLLLFLPLYGVILNFIMKKL
                     DLK"
BASE COUNT         4970 a         3864 c         3268 g         5358 t
ORIGIN      
        1 ttataaactt cttcaaattg tacattttcg agaaaatttt cgctaagccc accatcttga
       61 ttaggctttc tagatatatg ccaaaatcca gataaacgat aataccctac ctgagataat
      121 tttttctctg catagctttt atcatttatg agcattcctc tagatatgag tagttctact
      181 aattcgtgat actctttatg tggttttgta ggcataaaat tgaaggcatt ttaagaaagg
      241 caaggacgta gcttgacact ctaagtcgat tacatttagt aaacctcagg gacaggggct
      301 acgccacgat tgcaagggat tatacatttt agctgattaa agtcaaaagg tttcatcaat
      361 taataatagc aatactgtac ttttaaggac tataattgca aaaaactgat aaaattttac
      421 cgcttgttac tgcttacggg ccgcttttac aacacctttt acacttaata gcttacggag
      481 aatcagctca gaatgctctt tattttccac agaaatttgt actctcactt gatagatatt
      541 tccttctctt gcctcgctat taatgctgcc aatgttgcta tttaatttgg caagcgttga
      601 tgtgatcccc gcgagtaccc ctggttcatt gataatatcc agtacgattt ccgtttcaaa
      661 ttgaatcgct ttttctttgg caatttccca ttccacaggt aaataattac tcggctctgt
      721 tgcgtaatct ttcacattac cacaacaagc attgtggatt gccaatcctt tacctgaact
      781 gacgtgagca ataatttcat cacccggtat aggtaagcaa cagtttgcaa aactgataag
      841 gcggttctca atcccttcaa ttttaagcgg ttgattattt tctggattac catcagtatc
      901 aattaatagt ggctccccta ataagcgttg agcgataaca ttactcattt ggttacctag
      961 accaatttca gccagtagct catcaaagct tgataaacgt agctcgtcta atacggattg
     1021 aatagtttct gaacacaatt catcaagtga gcgtaaattc attgcccgaa ctagctgtct
     1081 acgcccaagt gcaatcgcct catcgtgctg ctgattttta agcgattgac gaattttagc
     1141 cctcgcctta ccacttacta caaaatttaa ccacgatgca tttgggcgct taccttgctc
     1201 ggtaataatt tccaccgtct gtcctgttcg tagcggttct gaaagtggat acggattgcg
     1261 atcaaccatc gcacctacac aacgatcccc aatgcctgaa tgcaccgcat aggcaaagtc
     1321 aatagcggta gcattcgccg gcaattcaac aatacgccct ttcggggtaa agacgaaaat
     1381 atcgtcagag aacagatccg atttaacgct atcaataaat tctgctgtat tgccggcact
     1441 gttttgcaat tcaacaatac tttgtagcca ttgctgggct ttgagttgaa cggtcgtgtt
     1501 atggtgcgac tcgccctctt tgtaacgcca gtgagctgtt acccccatat ccgccatttt
     1561 gtccatatct tcggtgcgaa tctgtacctc caccggtaca ccgtgcgggc caatcatcga
     1621 agtgtgtaaa gattgatagc cgttcggttt tggcacggca atataatctt tcacccgttt
     1681 cggacgaggc ttatacagtg cgtgcatctg ccctaataca cggtaacaat tatctacatt
     1741 atcaaccact actcggaaag cataaatatc taaaatcgaa tgaaaatgtt gatctttctg
     1801 gcgcattttt tggtaaatgg aatagagatg tttttcacgc ccatacacac gggcttcaat
     1861 ttgcacctct tctaaccgac cacgaatatc atcggcaatg cgttgaatta gctctttacg
     1921 atgtcctctg gcactggcaa tagccatttt cagtacccga taacgttgcg ggtgcattgc
     1981 ctcgaagcct aaatcttcca actcgttttt aatatgctct attcccaagc gatgtgccaa
     2041 cgggctataa atctctaagg tttctttcgc tatacggcgg cgtttatccg gacgcaaagc
     2101 accaagcgta cgcatattat gggttcggtc ggcaagttta attaacacaa cccgaatgtc
     2161 tttggtcatt gccaaaatca ttttacggaa gtttgccact tctgcctctt ggcgggtgcg
     2221 gaattttaat ttatccagct tagaaacgcc ttgtacaata tctgctacgc tctgtccaaa
     2281 ttccgccgcc agttcttctt cggtgtaagg tgtatcttca atcacatcgt gcaacaaagc
     2341 cgcaatcacc gcttcttgat cgagcttcat ttccgcaata atcgacgcca ctgctaccgg
     2401 gtgagtaata tagggctcac cgctagagcg tgtttgtccc tcgtgagcat cacgggctat
     2461 cacataagca cgttttacac gctcaatctg ctcgggtggc aaatagcctt gaataattcg
     2521 atctaaaggt tcaaaaagat acacgttata cctcaacaac agaaataaaa atggacaacg
     2581 aatttgcaaa ttttgaggaa aatcctaccg cttgcagact caattgtcca ttctctattt
     2641 acgaaaaata aaattacgct tcgttgctca tttcagttaa aaatgaaatc gcctcttgct
     2701 ccgccgcttc ttgcttaata gagtcgtgat tttccagctg atccataatg tcagttgtaa
     2761 ttaaaccttc ttcaatttca cgtaatgcaa tcacggtcgg cttatcgttt tcttcaggca
     2821 caagtggctc acgggtgtga agttgtaatt gtcttgcacg acgtgcagca attaagatta
     2881 aatcaaaacg gttgccaatt ttctccgctg cttcttgtac ggttacacga gccataaatt
     2941 tactccaaag atttattcgg ttttattcat aaaaagattg cgaattatac agaaattccg
     3001 ccaattccgc aatgaaagcg ggctaaattc acaaaattta tttggtattc agtaaaatcg
     3061 ccaataattc agcctcaacc tctttgccga attttcccat tctaaaatcg gcttttagtt
     3121 gctcgaattg ctcagggttc gctgccattt tatcttttaa aaattgcgga aattcagata
     3181 acactaattc tgttttgcca ttacgaatat caaaaatagt tggaattttt tgcgcagaaa
     3241 tgaccgcttg ttgctgttca tcgctgtcaa aatgtttgcg ttcctgatta tctttgcgag
     3301 ccacatattt caccttaatg ttaggattga gctttgccat tcgctggaaa taagccacaa
     3361 tttccacaca atcggggcaa tatggctctg ccattaccag ccagtcccct tgcacgccaa
     3421 cagcttgcag tttttcttcc gtatctgtgg aaagcttgac ctccacatac acttctaatt
     3481 gattttcacg atcttcatcg ctgttaaatt ctaaatattc gtaaaaatgt gccataattt
     3541 tgtcttttcc tatctcatct taaatggatt tacgccataa aatttcacaa tcaactttaa
     3601 cgtcatctat tttctgttgc gctaactttt gctgaattaa ttcaaaggta cgttcggcaa
     3661 tttgttggtg gtcttgctta attgaatgaa tatgaaaagg tagtgcattc agtaaatggt
     3721 gatcatcaaa ggttgctaaa tgcagttctt gagtcaataa tttatccatt tgttggtgtt
     3781 cagtcagata gcgcattact ccctcaagta gggtaaaaga ggctgtgaat accgcttctg
     3841 ggagcctgcc aagtttttca actatctgag cgaacatttg atagcccgat tccggctgat
     3901 agtcttgatg cagaacccaa ttttcatcaa gtgccaaatg tgactgctcc aaaccttcac
     3961 ggaagccttt taaacgattt tgacttggcg agagtgaaag ttgtccacct aagtaaaaaa
     4021 actcttttaa gtgataagcc cgtacaatat tttccaccaa catactgata ctttgtgtat
     4081 cattactggt gatagaaggg atattcaacc cagaaatata gcggtctagc tgtaacattg
     4141 gggtatattg tgccgcattt tgataataag tcggctcatt atgtgtcgga gcagtaatca
     4201 gtaaatctac ctgtctgtct aataaacgct ctatcgcttt cttctcacct tcaaaggtat
     4261 catccgagca agcgatcact agctgtaacc cgttttcacg gcataatttc tctaaggttc
     4321 ttgaggtcag agcaaagcca taattcgtta aatcgggaat gactaaaccg atcacattcg
     4381 tgcgttgagc ctgtaatgat tttgcatata cattagcacg ataaccgtgt tttttagcga
     4441 tctctttcac tttttggcag gtttcggatt tgattctaaa atcattgccc cgcccattta
     4501 aaatcatact gactgttgtt ttagatacgc cgctgagttc cgcaatatca ctgagcgtta
     4561 ggcgtttttt agtcacactt atctcctttt agcataaaaa tgggcattac tgcccattgc
     4621 tttattctac gctaattggc aatacttttg ctactttcac ttgaatcgga cgagagcttt
     4681 ttacgacatt ttcacgctta gcgataaaaa agcgtgaagt cagcactttt tccccgccgt
     4741 ttacgaaaat ttccaccaca gaacggtcaa agaaaatctc gattgtctct aattgttcaa
     4801 ttttgcaatg acgaaccgag ccaaattttt ccatcaattc tgtttgttcg gtttggctac
     4861 gatctaagct caacacccca ttttcaaaac gtaagctgag cttttgcccc tgttcattgc
     4921 tgaaaaaatc caacacaagc ggttgatttt ccacagaaat ttgcaagtag gcagtatcca
     4981 aattctcgat tgcaaaattt tctgacattt cgaccgcttg taattcgcct acattcacga
     5041 ttgggttttg tatcactttg ccgttttgca gggaaagttt acgaggcaat gtcagcattg
     5101 aatgccactg atatttatca gttgggtaag tgagatcagg caagccgacc cagccaaaca
     5161 aaatgcgatc ggaattttcc accgtttgcg gtgcgtaaaa gtcaaagccg tagtccagct
     5221 cttcaatatg ctctgcccgt aatctgttgc cgtttagctc gccaagtgcg taagtggcgt
     5281 ggtagttatt ttggaattga tggctttcac gcagtttgcc ttgtggcgac cacacaaaca
     5341 gatctttacc accaagtgag aacagatccg gacactccca cataaacaca ttgctgttat
     5401 caaaattgtg gacttccagt tctgcgatta aacggggtgt ggcatttaaa tcgtccattt
     5461 cataaattaa cgccgtgccg gtcaagtttt cacgctgagc ccccaacaca aaacgaattt
     5521 tgccctctgc ggtaaggtaa ggtttcgggt cacgcacgtg ttcggtgtag cctgccggtg
     5581 cttggtcgat aatgcaacgc ttttccaata atttgcccga tttatcaaaa atcgcgatat
     5641 tttggtgagg aatgcgggca ttatctgatg ggcggcgtgt attgccggtg taaaaagcga
     5701 caatcttatc ttgccataaa atcgccccac ctgaataaca gccgtgggat tcaaacagct
     5761 catcgggaat cagcaaatcc cctttactga acgtttgaaa atcggtagtg atgaaatgct
     5821 gccaatgttt cattccatgt aatgccccat aaggaaacca ttgggcgaaa atatggtatt
     5881 tttcaccatc gaaaatcaag ccgtttgggt cattaaataa gcctgtttcg ggagcgagat
     5941 gataggttgg gtaaaaatcg ggatcagata aaacggtttg gcgaagagcg tttaattcgc
     6001 cctcgctttg tgcgtgcagg cttttgtatt tgccgttgtt gaaaatgtgc atagagtgtt
     6061 cctgtcattt cagaaattac gatggtgcaa gcgtccacgc ttgtaccctt ttgtaaaaaa
     6121 tgaggcacaa gcgtggacac ttgcgccatc attacattat tccgccaaaa atgcgtctaa
     6181 ctccgcttta ttcggtaatg ccgacatcgc cccttttgct gtggtggcta acgcaccgga
     6241 agcatttgct ttgcggatca cttcaactaa cacagtttca tcgtgccaat tcggcgtttg
     6301 agcaagaccg gctaataatc cgctgacaaa ggcatctccg gcaccggtgg tatccacagg
     6361 tttcaaggct ttgccggcaa cgacttggct ttttccgttg aaatggtaga ttgcaccgtc
     6421 tttgccaagg gtgataataa tcaatttctc cggatactga gcggtaatag cttgtgtggc
     6481 ttgttccaaa gtttctgtct cggttaataa ggtcagctct tcttcggaaa atttgagaat
     6541 atccgccatc gccaccacag aatttaccac tgttttcatt tcatcaaggc tcttccagag
     6601 cgattcacgc aagtttggat caaacgaaac atagccaccc gcctttttca ctcggcgaat
     6661 cccttcaatg gtagtggaac gggatgggtc gttaatcaag gcaatagaac agcagtgtaa
     6721 gaaatcacct tggttaaatt caggtaaatc gccgatttct aaaaattggt cggcactcgg
     6781 atttaccata aaagtaaaac tacgctcacc gttatctaag ccaacaatca cggtggaagt
     6841 gcggtgctga gcgtctaaaa tcatctgttt ggtgcaaaca ttttctgcct gtaacacttc
     6901 tcgcataaat ttacccagag ggtcgttacc cacacgcccg ataaatcctg cctcaacccc
     6961 taaacgagaa acgcctactg caacattcgc cggagcacca ccggcacatt ttaaatagtg
     7021 atgttcgccg tcgggaatta aatccaccac cgcatcgcct gttacccaaa tcttactcat
     7081 ctcatacacc tttaattagt cacaaaacac caagctaaaa cgatttagca tttattcgat
     7141 tatatactaa aagaccgctt gtacatacct acaagcggtc attttttctt taatttttac
     7201 agattaacca cgtatttacc tacacctaaa tcatcttctt tacgagtgcg ggcaatcacg
     7261 ctttctgccg attccaccac acgtaatccc atttggtctt cggtacgaat cacttcgcca
     7321 cggagtgagt tggtataaac atcggtgatt ttcacatcga caaatttgcc aatcatatcc
     7381 ggtgtgccaa caaagtttac tacacggtta gtttcggttc tgccggttaa ttccatcaag
     7441 tctttcttag acgggccttc aaccaaaatg cgttgttctg taccgagcat tgcacggcta
     7501 aattgcattg cttggtggtt gatgcgttgt tgtaaacggg ataatcgctc ttttttctca
     7561 tcatcggaga cattatcagg cagatctgcc gctggtgtac ccggtcgagc cgagtagata
     7621 aagctaaagc tcatatcaaa gttcacttgc tcgatcactt tcattgtttg ctcgaaatcc
     7681 tctgcggttt cgcccgggaa gcctacaata aagtccgaac taatttgaat ctcaggtcga
     7741 acagcacgca atttacggat aatcgctttg tattccaacg ctgtgtggtt acgcttcatc
     7801 attgttaata cacggtctga accactttga atcggtaaat gtaagaaact gaccaattca
     7861 ggtgtatcac gataaacttc gataatatca tcggtaaatt caatcgggtg gctggtggtg
     7921 taacgtaagc ggtcaatacc gtcaatcgct gccactaagc gtaataattc ggcaaaggta
     7981 caaatgccgc catcaaaagt ttcaccacgg taagcattta cgttttgacc gagtaaatta
     8041 acctcacgca caccttgtgc cgcaagttgg gcgatttcaa ataatacgtc atccaccggg
     8101 cgggaaacct cttcgccacg agtgtaaggc acaacgcaga acgaacaata tttattgcag
     8161 ccttccataa ttgaaacgaa tgctgtaggg ccttcggctt ttggctccgg caagcggtca
     8221 aatttttcaa tttccgggaa agaaatatcg acaatcgagc ttttaccgcc acggatttgg
     8281 ttgatcattt caggcaaacg gtgcaaagtt tgtggcccga aaacaatatc tacataaggg
     8341 gcacgatcac ggatatgctc cccttcttgt gaagccacac aaccgccaac accgataatc
     8401 aggttcggtt tatctttttt ccagtttttc caacgcccga gttgcgagaa tactttttct
     8461 tgtgcttttt cacggataga acaagtgttt agcagcaaca cgtctgcatc ttcagggttt
     8521 tcagtcagtt caaaaccgtg agtagagttt aggagatccg ccatttttga tgagtcgtac
     8581 tcattcattt ggcagcccca agtggtaata tgtaatttag ccataacgtt taaaattaat
     8641 aaataattca ataacttaga aaagaaaagc gtaaagcaat ttattatttt tgacttaaaa
     8701 taaacccttt acgcaaaatt tgtggcgtta ttttaccttg ttgcctattt tttatctata
     8761 aataatcgcc atttatccga ttttacctaa aacaaaaaag ccacgatctt ccatcgtggc
     8821 ttccagctaa gtaggaggta ttatttggtt aaggttaaaa ccacgctttc accggcaaca
     8881 acttggccat ttaatttaga taagttgctg atttcatcca tatttgaaat cacgattggt
     8941 gttaatactg atttggcttt gccttcaagt agagctaaat caaatttaat gatcggctcg
     9001 cccactttta cggtttgacc ttcctgtgca aggcgagtaa agccttcgcc ttttaattca
     9061 acagtatcaa taccgaagtg aacaaataat tccacgcctt cttcagattc aatcgaaaaa
     9121 gcgtggttgg tttcaaaaat tttgccgata gtcccattta ctggagcaac gatagtgtct
     9181 ccactcgggc gaattgccac accgtcacct acaatttttt cagagaaaac aacatcaggc
     9241 acatcttcaa tatttacgat ttcacctgtt aatggcgcat agattttgat ttcttgactc
     9301 tctttttgtt ttgagccgaa taatttatca aataaaccca tcttaaaatc tcccttagat
     9361 attagataca aaattctcgt acattttata cgagaatttt gtatttgtat gctaaataat
     9421 taaaattagt ttaatttctg ataaaactca tctactaagc gttcaatatc tgcagcagtt
     9481 ggctgagcaa gcgcctcatc agctaatgct ttagcatcgg caaaattaat tgagcgaatg
     9541 agttttttaa cgtgtggcac agagataccg ctcatactaa attcatctaa tcccataccg
     9601 agcaacaacg cagttgcacg cacgtcaccg gctaattcac cacacatacc tgtccatttg
     9661 ccttcagcgt gtgaagcatc aataacttgc ttgattaagt ttaagactga tgggcttaat
     9721 gggttatata aatgagcaat aatttcatta ccacgatcta ccgcaagtgt atattgggtt
     9781 aagtcattag taccaatact aaagaagtcg gcttcttttg caagatgacg tgcatttacc
     9841 gctgctgatg gggtttccac cataatacct agttttaagt tctcatcaaa agcgtgacct
     9901 tctgcacgta attgatcttt caattccgca acgatggatt ttaataaacg gatttcttcc
     9961 accgaaataa tcatcgggaa cattaccgct aaattaccga acgcagaagc acgtaatacc
    10021 gcacgtaact gagtatctaa aatttcacgg cgggtgaaac cgatacgcac cgcgcgccaa
    10081 cctaagaatg ggttcatttc tttcggtaaa tcaaggtatg gtaactcttt atcacctccg
    10141 atatccatcg tacgcagaat gaccatttga ccattcattg cttcaacaat ctctttgtag
    10201 gcttgaaatt gctcttcttc tcccggtaat tgagtacgat ccataaacaa aaactcagta
    10261 cggtataaac caaccgcttc accaccgttg cgtaatacac cttccacatc acggatagta
    10321 ccgatattcc ctgccacatc aactttatgg ccatctaatg tttgagcagg caactctttt
    10381 aatttggcta attcttcttt ttccgcattt aatttctctt gtaatgcttt gaaattagcg
    10441 attttttctt ccgatggatt taaatgtact tcattgttca ctgcatctaa aatcagaaaa
    10501 tcaccagttt taactaggga agtaacattg ttagtaccaa caatggcagg aagctctagg
    10561 gaacgagcca taatagaagt gtgagaagta cgaccaccga catcggtaat aaagcctaat
    10621 actttatcta aatttaattg agctgtttcg gaaggggtta agtcataagc gactaaaata
    10681 acttcatctt gaatatcacc aagatctacg atattcatat ttaaaatatt gcgtaccaag
    10741 cggttaccaa tatcacgaat atcacctgca cgttctttta aatattcatc gtcaatttcc
    10801 gcaagcattg aagcctgcat ctcaatcact ttacttgctg caacatccgc agtcacaaga
    10861 ttatcagtaa ggtaactcaa aatttcttct tcaagctctt catcttctaa gatcatcaag
    10921 tggccttcga aaatcgcctc tttttcctca cctaatgtac ggcgagcttt ttctttaatc
    10981 gcggttaatt gagcagctgc tttttcgcgg cctgtaaaga attttgcttt ttctgcctca
    11041 acttcgcttt cagtaatttt gcgagtattt agtacaatcg gctcttcttt taaaaccaat
    11101 gcttttccaa atactgcacc aggggaagct gcgatacctg taatcataat tgtgtcctta
    11161 atttaagatg atgtaaaaat catctggatg ttacatagca aaacacttta ttgtagctta
    11221 ttaagctaca ataaagtgac ataaatctta aatccgagaa tagaaaaatt attctaaagt
    11281 aggaatcaaa tcaactaaga aatcaactgc tttttgctca tcttcgccgt ccgcagaaat
    11341 tgtaattgtt gtgccttgag tcaaacctaa tgtttgtaat ttgaataagc tttttgcact
    11401 tgcactttta ccacctgaag tcacagtgat atcagaagca aaacctttag ctgcttttac
    11461 aaattcagcc gctgggcgag tgtgtaaacc atttggagcg gtaataacaa catcttttga
    11521 gtacataaaa tcttcctctt aaatttgaaa gttaaaaaaa tttgttttaa tccatttatt
    11581 ttgcgcacgc aactttacta caaattcaaa ttaaaaacac gctaaaaagc gcaaaaactc
    11641 gtcgtatcac cctgctaaat agggtgtttt ttaagctaac ttaaaaatca tttgtcgaat
    11701 atcaagattc tagcacacac ttaagcggaa atgttacaat aatttcgcta ccacttcttt
    11761 cacttatatt ctaaatttgg agcaatatgc ttagcacatt aaccaaaaca accgcatggt
    11821 ttatctactt tagtattatt gctctctatg tttttagtct atgggcgtta atggactatc
    11881 accaaaatga taccttattt gttttttccg atataacggc cacggtcgct tatagcctac
    11941 ttcaagccag cctctctgcg gtaatttcac tatttttagg cagcctactg gcaagatctt
    12001 tcttttattt ggactttaaa ggaaaaaatt tactctataa aaccatttcg tttatctggg
    12061 cattaccctc actagtaatt atttttgcgg taattggcgt atttggtaac tcaggctggc
    12121 tagccaaact tttccaacaa ctcggttgga attggcaatt taatttatac ggcttgcacg
    12181 gcatcatttt ggctcactgc ctgtttaaca ttccgtttgt gatgaaatat tataccggag
    12241 ggcttcaatt gactccaagc agtcgctttc agcttgcggc tcaattaaac ctaacaggtt
    12301 ggaattatat ccaaattgtg gaactaccga taatcaaaac tttgctgcct tatatgttta
    12361 tgactgtttt tctggtctgc tttaccagtt ttccaatcgt attaatgtta ggcggtagcc
    12421 caaaatacag cacgcttgaa gttgccattt atcaagcggt cacttttgaa tttgattttg
    12481 caaaagccct catcttaatt ggggtacaat ttgtagtggg cattggctta caattagtaa
    12541 tgaattatat ctcgacttct gcactcaaaa agctaaaaca gcaacctaac cgagtagaaa
    12601 tttggaaacc aaagcctacc ggactggcta aactcggctt acaagcggtt atttttttgc
    12661 aaagttttgc aataattcta ccgcttgtca gcgtcatttg ggcaggacta agcgtgtcaa
    12721 aactcagtga gcgtttgctc aaccctactt tatggcaagc tactcagtat tctttatact
    12781 taagtttaat tgcttctata ttcgtaatca caatcagcta tttgattgca cttgaagctc
    12841 gccaattact ctatacaaaa gccaagctca gatatagcat tctcaccgca atcaccctat
    12901 tccccttact tctgccgatc tttttattat cggttggttt gtttatttta ttaatgaata
    12961 gtgaactctc aagcgaggca ttactgctac tggtcgggat atgcaacggc ttaacattac
    13021 tgccatttat ttacccaatg cttttctccg caatgtggaa tagcctcacc tcgcacgaca
    13081 aattagcaca aggacttggg ctaaaggggc ttcgccgttg gtggattgtg gaaaaaaatc
    13141 aactaattcg accgcttgtt accgtatttg cgttagcaat gtcatcgagc ttaggcagtt
    13201 tcaccgtcat tgcttttttc ggcaacgctg atttcagctc actcccttat ttactctacc
    13261 aacaacttgg tagctataga accgaagatg ctgccgttac cgcactcatt ctgatgttat
    13321 ttgcgttact accattctta ttcagcaagg ataaactatg atcgaactgg atctccattt
    13381 cacttacgaa caaatgaata tgcactttca gctttctgtc aaaaaaggcg aacgtattgc
    13441 agtggttggc gaaagtggcg caggcaaaag cacattactt aatctaattg ccggttttga
    13501 aaaggcagaa agtcagcaaa gccagctgtg gctaaatcag aaaaatcatc ttgataccga
    13561 agttgcacaa cgtcctgttt caatgctatt ccaagataac aatattttcc cgcacttaac
    13621 ggtagaacaa aacatcggct tagctttagt accaagtttg tcgctcaatc cgaaacaaaa
    13681 agcacaggtt aaacaaattg ccacacaaat ggggattgaa accttccttc agcgtcaagc
    13741 cgatcagcta tcgggcggac aaaaacagcg agtggcatta gctcgtactt tgttgcggga
    13801 taagccgatt ttattattgg acgaaccctt ctccgccctc gacccgcaac gccgagccga
    13861 attacagcaa atcgtgtttg acatttgcca aagcagaaat ctaaccctgt taatggtaac
    13921 tcaccaacta tccgaaagcc tatttctatt taatcgggtg ataacggtag cagatgggga
    13981 gattgtttct gatctctccc ctctttagca aagcagatct gctaggttct aaatgtaggg
    14041 acgccacgct ggcgtacgca acgatgtcaa ttccaacaat ctaacggtga atgatgttcc
    14101 gcacggatac tagcgttatt catttttttc agaactcgcc ccctacttta gcaaagaggg
    14161 gaactgtaac taatattacc tccctattcc gctattctct tccccaaaat gtgatctact
    14221 tcacaaattt ggaaatattt taaatcttct cttttttagc taaaccgatt tagttaaaat
    14281 gcaaccgatt attttttatg aaaggtaaat tcaaatgaac tatccaaaaa ttgcagaaca
    14341 aacgattgca aaattaggtg gcaaagaaaa cattaccaca cttgcccact gtgcaacccg
    14401 tttacgctta accattgctg atgaatccaa aattgataaa gaggcgattg aaaatattga
    14461 aggcgtgaaa ggtcaattct ctactcccgg tcaataccaa attatttttg gatcaggcac
    14521 ggtaaatgaa gtgtatgccc aaatgcaaaa acaaatgggt atggcagata tgtccacctc
    14581 tgaagtagcg gctgccggtg cagcaaatca gccattacta caacgtttgg taaaaggctt
    14641 agccgatatt ttcgtgccga tcattccggc tattgtggct ggcggtttgt taatgggtat
    14701 tcactcaatg ctaacggcag tcggtttctt ctgggaaggt gaatctgttg ttagccgtta
    14761 tccgaatatt tccgatttag ttgatttcat caacactatt gctaacgcac catttgtatt
    14821 cttacctgta ttactcggtt tctcagctac acgcaaattt ggcggtaatc cattcttagg
    14881 tgcggcactt ggtatgttat tggttcaccc ggcacttgca gacggttgga actatgccaa
    14941 aaccttaatg gaaggtaaca tcaaatactg gaatattttc ggcttagaaa ttgaaaaagt
    15001 gggttatcaa ggcacggtta ttccaactat cgtttcggct tgggtgttag caacccttga
    15061 gaaaactttc cgtaaatttg tgccaagcta tttagataac ttggtgacgc caatgatgtc
    15121 attatttatc gccggtattt tagctttcac tgtaatcgga ccattgggtc gtgaagcagg
    15181 ttcagcgatt tcagcaggct taacgtggtt atatgacagc ttaggcttta tcggtggagc
    15241 aattttcggt acattctacg ctccaatcgt gattaccggt atgcaccaaa cctttattgc
    15301 ggttgaaacc caattattag ctgaagtagc acaaaccggc ggtacattta tcttcccgat
    15361 tgcagcaatg tctaacattg cacaaggtgc agcctgttta ggtgtagctt ttgcaatgaa
    15421 agatgccaaa gtgcgtggtt tagccgtgcc gtcaggtatt tcagccctgt taggtatcaa
    15481 ccggcaatgt tcggagtaaa tttacgctac cgccaagcct ttattgcggc gatgatcggt
    15541 tcaggtttag ccagtgcatt tatcgctttc tttaatgtga aagcaattgc cttaggtgca
    15601 gccggtttct taggtattcc gtcgattaaa cctgacagcc ttgcaatgta ttctgtcggt
    15661 atggtaattt catttgtagt tgcatttacc atttcagcca tttgggtgaa aaaagcacaa
    15721 gcgaaataat caaaaataga tcacaaaaaa gggattaagt gttagcttaa tcccttttgt
    15781 ttttaaacgc cttagcttaa caatgagttt cgcaagcggt catttttcgc taaaaatttg
    15841 caaattagct gttgtgcata attcgagaaa tacgcccttc ggcaatctct tcatcacgaa
    15901 ttgtcagcac ttcacagccg tctttggtaa ctacaatttg atgctcatat tgtgcggagt
    15961 ggctgcggtc tttggttttc actgtccaac cgtcacccat taagcggact tcttttttgc
    16021 cggcattcac cattggctca atcgtaaaca ccattccttc ttttaacact acaccgccat
    16081 catcggtagc ataatgcact acttgtgggt cgcaatggaa ttcagtacca ataccgtgtc
    16141 cgcaatattc tcgtactacc gaaaagcctt ctttttccac atatttttga atcgctgtac
    16201 caatttcttt taaacgcacc cccgctttca cggtgcgaat cccgacataa agggactcta
    16261 gcgtaaccgc cattaagcgt ttatcccgca cacttggctc accgactaca tacatcatcg
    16321 agttatcgcc atagtagcca tctttgataa ccgtcacatc gatgtttaaa atatcgcctt
    16381 ttttcagctt tttgtcatca cttggaatac cgtgacaaac gacctcattt aacgaaatgc
    16441 acaccgattt tgggaagccg tgatagccca aactggctga agttgcccca tttgccaaaa
    16501 tgtattcgtg acaaatttta tctaattcac cagttgttac gccctctttc acataagggg
    16561 cgatcattac taaaacatct gaagccagtt tacaggctac tcgtagtttt tgaatttctt
    16621 cttcgtttct taatggaata ttattcatta cattgctctc tgctatatct gccataaaaa
    16681 gtaaggggat tatacctttt ttcagcacaa tccccaaacc tcagtttaga tttctacttt
    16741 aaatcaagtt tcttcataat gaaatttaat atcacaccat aaagcggtag aaatagcagt
    16801 aggctcacaa agagtttaaa cgcataatcg accgaaccaa tagtaaacca atgctctgcc
    16861 atatattcat cgctactttt ataaaaggcg atagcaaaga atacaaaagt atcgattaaa
    16921 gtaccaaaaa tggttgaaca ggttggagca agccaccaac gcttaccttg tcttaaacta
    16981 ttaaatacta gaacgtctaa taattgccca actaaataag ctgcaaagct agccagtgca
    17041 atacggaaaa caaaaaagtt gaactcagtt aatgcactaa agccttgaaa ttgggtttca
    17101 aagaataaaa cggaaatcac atagcttatg acaagtgccg gaaacatcac aacaaaaata
    17161 atttttctag caagatctgc accaaataca cgcacggtta aatcggtcgc taagaaaata
    17221 aatgggaatg ttaacgttcc ccaagttgtc ggaaagctaa attctgttag tggtacttga
    17281 acttcaaagc taatttgcac taaatagttg ctaattgcga tgataaaaat atggaaaagt
    17341 gaaagtaaaa ttagagaacg acgtttgttc tcatccgaaa aataagtagt aaagttcata
    17401 ttgtatcctt tttcgttaaa tgaaaacttg aggtaaggga actcaagggg gcattattct
//
LOCUS       DANLXD010000053        17444 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.053, whole genome shotgun sequence.
ACCESSION   DANLXD010000053 DANLXD010000000
VERSION     DANLXD010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17444)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17444)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17444
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.053"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(284..1417)
                     /locus_tag="PXD18_001452"
     CDS             complement(284..1417)
                     /locus_tag="PXD18_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis PLP-dependent protein"
                     /protein_id="HDL6301885.1"
                     /translation="MTKFNNIETTLVQIGNRTDPRTGAVAMPIILSTAYGRDGLGEST
                     GWDYTRTKNPTRAVLEQGIADLEGGDAGFAMASGMAAIQLVMSLFKAPDEWIISSDVY
                     GGSYRLFDFSHKNHGTLKPVYVNTADLAAIEAAITPNTKAIFVETPSNPLMEECDVAA
                     IAKIAKKHNLMLIVDNTFLTPALFRPIEHGADIVIHSATKYLSGHNDVLAGLIVAKDS
                     DATKVNGQNLTERLFYFQNCAGAVLSPFDSYLAVRGMKTLALRMERHQSNATELAKFL
                     AEQPEIDSVLYSGKSGMLSFRLQKEEWVAKFLKAIKLITFAESLGGAESFITYPATQT
                     HMDIPEAERITRGITNNLLRFSVGLEHVEDIKADLLQAFKQLK"
     gene            complement(1434..2246)
                     /gene="dapB"
                     /locus_tag="PXD18_001453"
     CDS             complement(1434..2246)
                     /gene="dapB"
                     /locus_tag="PXD18_001453"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005696006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HDL6301886.1"
                     /translation="MTLKIGIVGAGGRMGRQLIQAVHNAQGVELGSAFERKGSSLVGS
                     DAGEVAGVGTLGVVISDDVAQNVAGFDLLIDFTRPEGTLEHLDICVAHHKQMVIGTTG
                     FDDAGKAAIKAASEKIGIVFASNYSVGVNLVFKLLEKAAKVMGDYCDIEVIEAHHRHK
                     VDAPSGTALSMGEHIAKTLGRDLKTHGVFERNGITGERKRDEIGFATIRAGDVVGEHS
                     VWFADEGERVEIAHKASSRMTFANGAVRAAKWLNGKQNGLFDMTDVLDLNNL"
     gene            complement(2297..2674)
                     /locus_tag="PXD18_001454"
     CDS             complement(2297..2674)
                     /locus_tag="PXD18_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301887.1"
                     /translation="MGIKVLFGTKISAELQYLPEKDLVKILQFKQHVEIYGLENLAGR
                     NKSSDDVPTNDPYWAEKVAKAQKYSLWHYHIGIPEYDTSQGFGNYTSEYILHYVKGEN
                     FIQIVDFTSHPPFKLPSESYLQN"
     gene            complement(2664..3137)
                     /locus_tag="PXD18_001455"
     CDS             complement(2664..3137)
                     /locus_tag="PXD18_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301888.1"
                     /translation="MMKNLPLSMADTLAVIYPAFDFAADDKPATEQQISLLNFRITMA
                     NQLLIACIETIEKNPNFWAEIDLNDFKKYLNQNKVVIFDTQQYFTDGSRTMAILDNMK
                     SNIRKIEQQLSQATAFNFDLERMKERLNDTFHEVPKDITNVNEFRNWLKGVANGH"
     gene            complement(3205..4293)
                     /gene="rlmM"
                     /locus_tag="PXD18_001456"
     CDS             complement(3205..4293)
                     /gene="rlmM"
                     /locus_tag="PXD18_001456"
                     /EC_number="2.1.1.186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase
                     RlmM"
                     /protein_id="HDL6301889.1"
                     /translation="MFNKLALYCRAGFEKEVAGEITDKAAQQGIFGFANLKENSGYVI
                     FECYQAGEADRLAQALKFEQLIFVRQMLVVGDLLQNLSENDRISPILAQYAELNPRQS
                     SDVFVETPDTNEAKELLTFCRKFTVPLRSALKKQGWLGKSENMQGSVSLHILFTRPGA
                     CYVGYAYNHNKSPFFMGIPRLKFPAEAPSRSTLKLEEAILTFIPQAEEKKRFNDTMVG
                     VDLGACPGGWTYQLVKRGVFVYAVDHGKMAASLHETGRIEHCPEDGFKFQPPKRKQID
                     WLVCDMVEQPIRISKLIAKWLTNGWCRETIFNLKLPMKKRYQEVQLCLNFLEEELTKH
                     GFWFKMQAKHLYHDREEITVHIAVMGQK"
     gene            complement(4293..4685)
                     /locus_tag="PXD18_001457"
     CDS             complement(4293..4685)
                     /locus_tag="PXD18_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HDL6301890.1"
                     /translation="MKNKFVAIAAFSGLFTVAFGAIASHALSAQLSPKALGWIETGIK
                     YQMFHTLAILALGLFQIANFGQNPPVCRAKAFNIIGSNWALGILLFSGNLYLLALNVP
                     TIHWLTPIGGLCFMLGWIALIYISVRKA"
     gene            complement(4792..5322)
                     /locus_tag="PXD18_001458"
     CDS             complement(4792..5322)
                     /locus_tag="PXD18_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HDL6301891.1"
                     /translation="MAALVAVMIMVSIGTFNWHSLKELKTHPIGFNVVMLVTVAIVVY
                     THNLALGVFSGVLLSALFFANKIGRYMAVKTSAIEKEELRYDVIGQVFFASSDDFIAQ
                     FDFTRSELKKVNIDLTHAHFWDVTAVSALDKVVLKYRKSDVEVEIIGLNEASKTLVDR
                     FGVHDKSEDVDIILNH"
     gene            complement(5273..6193)
                     /locus_tag="PXD18_001459"
     CDS             complement(5273..6193)
                     /locus_tag="PXD18_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HDL6301892.1"
                     /translation="MTTLFQQFSPTVIKQQWFSNVRGDVLSGLVVALALIPEAIAFSI
                     IAGVDPQIGLYASFCIAVIISFVGGRPAMISAATGAMALVLAGLVRDHGLQYMLAATL
                     LTGVLQIIAGWLKLGSLMRFVARAVVIGFVNALAILIFMAQLPELQNTTWHTYALVVA
                     GLAIIYLFPYVPVIGKIIPSPLVTIIALTLFTLWQGIDVRTVGDMGQLPDTLPVFLLP
                     DIPLNLDTLWIILPYSFSLAAVGLLESLMTATIVDEMTETDSDKNRECKGQGIANIIT
                     DFCGLFERYFESDSDGCISCSDDYGLYRHL"
     gene            complement(6348..8705)
                     /locus_tag="PXD18_001460"
     CDS             complement(6348..8705)
                     /locus_tag="PXD18_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HDL6301893.1"
                     /translation="MNTALEKGKFVFLDKPKNTITTAAHWGALNVTVENGKVVKSEGS
                     LAKNHQNELQDVVADQLYSPVRVKYPMVRKGYLEGNKDTTLRGRDKWVRISWDKAFEL
                     VSGEIQRVREQYGSESIFGGSYGWYSSGSLHASRTLLQRYLNVTGGFTNTKGDYSTGA
                     VQVIMPYVLGNIEVYAQQTSWHTIVESTELLVIWSSNPLNTLRIAWTSAEPEGIDYLA
                     KLKASGKRIICIDPVKSETCQFLEAEWLPINTGTDVALILGIAHTLITENKHDHDFLT
                     KYTVGFEQFADYVLGKADNLPKTAEWASQICDIPEEVIKTLANDFVTHRTMLMSGWGL
                     QRLQHGEQSHWALVTLAAMLGQIGLPGGGFGLNYRYSTNGLNVNSGVRLGAINAGKPN
                     PDMPFFPVSRIADALLKPNQPYDYNGQTLHYPNIKLVYWAGGNPFAHHPDTNYLVKAW
                     QQPETMIVNECYWTPTARMADIVLPATTSYERNDLTVAGDYVAKHIIPMKQVVEPQFE
                     AKNDYDIFAELAKRAGKEQAFTEGKSEMEWLKEFYQVAFEAGEKANTPLLDFEAFWAE
                     NKVLSFEAEHQNNTFVRYQDYRTDPIKHKLATPSGKIEIFSETIAKMNYEDCKGHPTW
                     FEHHEYSGKTNEAEPLALVTPHIKYRLHSQLAYSSLRQYYEVNGREPMLIHTKDAADR
                     GITSGDIVRIFNKRGQVLAGAVVTDGIIQGTVALYEGGWYDPQDLGKTDTPLCKNGNP
                     NVLTRNEGSSKLGQGNAPNTTTVQVEKYVGDAPEVTVFKAPFFSE"
     gene            complement(8841..11447)
                     /gene="acnB"
                     /locus_tag="PXD18_001461"
     CDS             complement(8841..11447)
                     /gene="acnB"
                     /locus_tag="PXD18_001461"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014391308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HDL6301894.1"
                     /translation="MENFIENYQQQVDERAALGVVPQPLSAEQTAQLVELLKNPPAEQ
                     AVFLLDLFTNRIPAGVDEAAYVKAAFLADITKGVATSPLISPAHAVKLLGTMQGGYNI
                     ETLLSALDNPELAPIAVEALSKTLLMFDNFHDVKERADQGNPFAQQVLESWANADWFT
                     SRPKLAEKLTVTVFKVTGETNTDDLSPAQDAWSRPDIPLHALAMLKNERDGIFPDENG
                     HTGPIKQLEALKEKGFPLAYVGDVVGTGSSRKSATNSVLWFMGEDIPYIPNKRAGGVV
                     LGGKIAPIFFNTLEDAGSLPIEVDVTNLNMGDVIDIYPYAGKICKHNSDEVLAEFELK
                     TEVLLDEVRAGGRIPLIIGRGLTHKARVALGLPESDVFIKPQSVSESNKGYTLAQKMV
                     GRACGVEGVRPGQYCEPRMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAA
                     YPKPVDVITHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIG
                     ISFPAGSGLVAFAAATGVMPLDMPESVLVRFSGTMQPGITLRDLVHAIPYYAIQQGLL
                     TVEKKGKKNIFSGRILEIEGLEDLKIEQAFELSDASAERSAAACTIKLNKEPIIEYLN
                     SNITLLKWMIAEGYDDKRTLERRIANMQAWLDNPELLEADENAEYAAVIEINLDEIKE
                     PIVCVPNDPDDARLLSQVQGDKIDEVFIGSCMTNIGHFRAAGKLLSQAQGELPTKLWI
                     APPTKMDAGLLTEEGYYSIYGKSGARVEMPGCSLCMGNQARVANNANVVSTSTRNFPN
                     RLGQGANVYLASAELAAVSALLGKLPTPQEYLDYMNNLQKDKDDIYRYMNFDQINSYV
                     KKADNVIVQVAV"
     gene            complement(11467..12714)
                     /gene="icd"
                     /locus_tag="PXD18_001462"
     CDS             complement(11467..12714)
                     /gene="icd"
                     /locus_tag="PXD18_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HDL6301895.1"
                     /translation="MQTQVQIPQGETIQLNQDGSLQVPDNPIIPFIEGDGIGVDVTPA
                     MKAVLDAAVEKAYQGKRKIAWMEIYAGEKANKLYGENTWLPDETLELIRQYHVAIKGP
                     LMTPVGGGIRSLNVAMRQGLDLYNCLRPIRYYDGTPSPVKHPELVDMVIFRENSEDIY
                     AGVEWVAGSPEANKVIEFLQQEMGVKKIRFTEDCGIGIKPVSKQGTQRLVRAALQYVI
                     DNNRKSLTLVHKGNIMKFTEGAFKEWGYQVAEEFGAKLIDKGPWMSLTNPKTGEEIII
                     KDSIADAFLQEILLHPTEYDVIATLNLNGDYISDALAAQVGGIGISPGANIGFEAAIF
                     EATHGTAPKIAGQNKGNPGSLILSGEMMLRHLGWVEAADLVVKAVSKTIANKTVTFDF
                     AEMLEGVTLRSTSEFAQDIIANM"
     gene            12948..14228
                     /locus_tag="PXD18_001463"
     CDS             12948..14228
                     /locus_tag="PXD18_001463"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005762304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HDL6301896.1"
                     /translation="MSKATLTLETGEKLELNMQKGTLGYQTIDIQPFLKHKLFAYDPG
                     LVSTAVCRSNITYVDGDEGVLLYRGYPIDQLAKHSDYLEVGYMLLFGERPTKEEYKDF
                     VQLIKKHTLVHEQLTKFFSGFRRDSHPMAVMCGVSGALAAFYHDAIDVNNQAHRELTA
                     IRLLAKIPTLAAMCYKYSIGQPFMFPQNHLSYAGNFLYMMFATPCEPYEVNPVLERAL
                     DRIFILHADHEQNASTSTVRTAASSGANPFACIAAGIASLWGPAHGGANEACINMLKE
                     IGTVDRIPEFIARAKDKNDPFRLMGFGHRVYKNYDPRAKVMRETCHEVLKELNIDNPL
                     FEVALELERIALSDPYFIEHKLYPNVDFYSGIVLKAIGIPTSMFTVMFALARTVGWIA
                     HWKEMYLQGNIKIVRPRQIYTGHTKRDFEPMDKS"
     gene            complement(14301..15530)
                     /locus_tag="PXD18_001464"
     CDS             complement(14301..15530)
                     /locus_tag="PXD18_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301897.1"
                     /translation="MFQAEPKNGKVTVEVLKQYLIDELKIDEEEIAIVIGNQHELDNI
                     DLFNPQCKINYIITVEALKEGWDCPFAYIFCSVQNVSSSKEAEQLLGRVLRMPYAKHR
                     QIEDLNRAYAPLSSKSFGETARNLQDKLIGMGFEALEVAEMLRIPQQENWIGNEGDLF
                     YTPTTVLALTQLPEMSDLSEAKRSQLKITEQEGHILVQVKGNLSEKLEKALIRTATGK
                     KKEQIEQQLQIHQNRVEILSSPAEKGEIFKVIPQLCMNIQGEFDLADSQVLLDYQSWN
                     LLDYPAKLDGFRLQENSQSFEIDVEDKRVSYHFNQQQLSFSDDWLRNPVKRGFSLPLA
                     HQNFYPDFIVELIDGRILIVEYKGEQLKSNEDSKEKALIGNLWEKLSQGKGLFIMAVK
                     SDENGQDVRTQLLNKLA"
     gene            complement(15497..16486)
                     /locus_tag="PXD18_001465"
     CDS             complement(15497..16486)
                     /locus_tag="PXD18_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDL6301898.1"
                     /translation="MKLKNYQNEALNRVSHYFSACLQSDAKTAFSQIQPEYSYKIPSE
                     HSNLRDVPYVCVRIPTGGGKTLLASHSIARIAKQYLDCDFPVTLWPVPSRTIKTQTTE
                     ALKNPQHPYRAVLDKTFNREVMVIESEDFDLLRPQDFGNKAIVIVSTIQNFRVENQDG
                     RKIYAFNEKLTAHFERLLPHIQANLEKISTTDLQENGLTSKQTGKIKCSFANLLRAYQ
                     PLVIVDEAHNARTSLSFDVLSQLSPSAILEFTATPNTDRKAGSNVLYHVSASHLKAEE
                     MIKLPIVLTEHHNWQQAIDGAVINRGALAQKAQYESEYVRPIYCFKLSRKTAK"
     gene            complement(16502..17020)
                     /locus_tag="PXD18_001466"
     CDS             complement(16502..17020)
                     /locus_tag="PXD18_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL6301899.1"
                     /translation="MNRRYIGIEIGEHAKTHVVPRLKKVIEGEQGGISKAVNWQGGGS
                     FRFCELGEEVFDAFGSLNPNIRFDDLAAHIWYLENHFPLQKNSEKSPLVGTFNGKAYY
                     LLYNGILGDKRPQSGNVLTRKLMAELPYFAEFIQQGMDIVVYGEACRLGEVQLAEKKI
                     TFKQIPYDVMSR"
     gene            complement(17030..17101)
                     /locus_tag="PXD18_001467"
                     /pseudo
     CDS             complement(17030..17101)
                     /locus_tag="PXD18_001467"
                     /inference="COORDINATES: protein motif:HMM:NF013704.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(17108..>17444)
                     /locus_tag="PXD18_001468"
     CDS             complement(17108..>17444)
                     /locus_tag="PXD18_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL6301900.1"
                     /translation="KKTSSITLISELIIEDQWNKNTVEIEGEWRYSQKSIDEQLKNGD
                     YYIIKSLDFRPRRVFERSAEKKKIHNLISRAHYDMATNEDSASEHLELFGEDIAEDSF
                     DYPKPEKLI"
BASE COUNT         5020 a         3936 c         3252 g         5236 t
ORIGIN      
        1 ttgttcgtat gagtgtaatg tgtggctaaa aaatttgaac aaacgaagcg acagcgttag
       61 caaaaactta aaatgatgta cggatttaaa aatctgttcg tttgcttgtt ttataagcaa
      121 actaatttcg cataattatt attatgttaa atagatagtt aaaataacac atttaattaa
      181 atcttttcgt gtttctctcc tcctttatta aaaaagaaaa cggtcagatt ggtaaaatct
      241 atacctaata tgaccgcttg tgaatacaaa aaaattactt caattacttc aactgtttaa
      301 aggcttgcag taaatcagct ttaatatctt caacgtgttc taaaccaacg gaaaaacgca
      361 gtaaattatt cgtaatgcct cgtgtaatac gttctgcttc cggaatatcc atatgggttt
      421 gtgttgcagg ataagtaata aaactttctg caccgcctaa actttccgca aaggtaatca
      481 atttaattgc cttgagaaat ttcgctaccc actcttcttt ttgtaaacgg aaagataaca
      541 taccactttt gcctgaatat aacacgctgt caatttcagg ttgctctgct aagaatttag
      601 ccagttcggt ggcattagac tgatggcgtt ccattcgtaa tgccaaggtt ttcataccac
      661 gcacggcaag gtaagaatca aatggcgaca gcactgcacc ggcacagttt tggaaataga
      721 ataaacgctc ggtcaaattc tgcccgttta ctttggtagc atcagaatct ttcgcaacaa
      781 ttaagccggc taacacatca ttatgccccg aaagatactt ggtcgcactg tgaatcacaa
      841 tatcagctcc gtgctcaatc ggacggaata acgctggggt taagaacgta ttatcaacga
      901 tcaacattaa attgtgtttt ttcgcaattt tagcaatggc agcaacgtcg cactcctcca
      961 tcaatggatt tgacggcgtt tccacgaaaa tcgccttagt attcggtgta atagctgctt
     1021 caatcgctgc taaatccgct gtattaacat aaaccggctt taatgtgccg tgatttttgt
     1081 ggctaaaatc aaacaagcgg taagaaccac cataaacatc gctggaaata atccattcat
     1141 caggtgcttt aaataatgac attactagct gaatcgctgc cattccagat gccatcgcaa
     1201 aaccggcatc accgccttct aaatccgcaa tcccctgctc taatacagct cgagttgggt
     1261 ttttggtacg ggtgtaatcc cagccggtag attcgcctaa gccatcacgc ccgtaagcag
     1321 ttgataagat aatcggcatt gccaccgccc ctgtacgagg atcagttctg ttaccgattt
     1381 gcactaatgt ggtttcaata ttattgaatt ttgtcattgt tattatcctt caattacaga
     1441 ttatttagat ccaatacgtc tgtcatatca aacaagccat tttgtttgcc atttaaccat
     1501 tttgcagcac gcactgcgcc attggcaaac gtcattcgac tagaggcttt atgtgcgatt
     1561 tcgacacgtt cgccttcatc agcgaaccat acactatgct cccctacaac atcaccggca
     1621 cgaatagtag caaagccgat ttcatcacgt ttgcgttcgc ctgtaatacc gttacgttca
     1681 aatacgccat gagttttcaa gtcacgccca agagttttgg caatatgttc tcccattgat
     1741 aaagccgtac ctgatggtgc atcaacttta tggcgatggt gtgcctcaat cacttcaata
     1801 tcacaataat cgcccattac ttttgctgct ttttcgagca gtttaaacac cagattcacc
     1861 ccaacgctgt agtttgaggc aaaaacgata ccgatttttt cactcgctgc tttgattgca
     1921 gctttacctg catcatcaaa accggttgtg ccaatcacca tttgtttatg atgagccaca
     1981 caaatatcca aatgttctag cgtgccttca gggcgagtaa aatcaattag taaatcaaaa
     2041 cctgctacat tttgggcgac atcatcagaa atcaccacac ctaatgtacc aaccccggct
     2101 acttcaccag catcactacc tactaatgat gaacctttac gctcaaaagc agaccctaat
     2161 tctacgcctt gtgcattatg gacggcttga attaattgac gccccattcg cccaccggca
     2221 ccgacgattc caatttttaa tgtcatattt gttcttcctt tttatatttg ttttttacaa
     2281 gcggttacat ttttaattaa ttttgcaaat agctttctga tggcaattta aaaggtgggt
     2341 gagaagtaaa atcaacaatt tgaataaagt tttcaccttt cacataatgt aaaatatact
     2401 cagaagtata attaccaaat ccttgactgg tatcatattc tggaatgccg atatgataat
     2461 gccataaaga atatttttgt gctttagcca ccttctctgc ccaataagga tcattcgttg
     2521 gcacatcatc agaactttta tttcgaccag ctagattttc caatccataa atttcaacgt
     2581 gttgtttaaa ctgcaggatt ttgactagat ctttttcagg caaatattgc aattcggctg
     2641 aaatttttgt accaaataaa actttaatgc ccatttgcaa cacctttcaa ccagtttcta
     2701 aattcattaa cattcgttat atctttaggc acttcgtgaa aagtatcatt taaccgctct
     2761 ttcattcgct ctaagtcaaa attaaatgcg gttgcttgag agagttgctg ttcaattttg
     2821 cgaatattgg acttcatatt atccaatata gccattgtcc ttgagccatc agtaaaatac
     2881 tgttgggtat cgaaaatcac caccttattt tgatttaggt attttttgaa atcgtttaaa
     2941 tcaatttcag cccaaaagtt tggatttttt tcgatagttt caatacaggc aattaataat
     3001 tgatttgcca ttgtaatacg aaaatttaac aatgagattt gctgctctgt tgcaggttta
     3061 tcatcagctg cgaaatcaaa tgccggataa atcactgcaa gcgtgtcagc catagataag
     3121 ggtaaatttt tcatcatctc tccttacgga agaagttgtc attatctact ggattactta
     3181 aaaaaacaac ttattcattt tatgctattt ttgccccatc accgcaatat gtaccgtaat
     3241 ttcctcacgg tcgtggtaga ggtgtttagc ttgcattttg aaccaaaacc cgtgtttcgt
     3301 tagctcttct tccaagaaat tgaggcatag ttgcacttct tgataacgtt ttttcatcgg
     3361 cagttttagg ttgaaaatcg tttctcgaca ccaaccgtta gtcagccatt ttgcaatgag
     3421 tttcgagata cgaatcggct gctctaccat atcacaaacc agccaatcga tttgtttacg
     3481 cttaggcggt tggaatttaa acccatcttc agggcaatgc tcaattcttc cggtttcgtg
     3541 taaacttgct gccattttgc cgtgatcgac tgcatagaca aaaacaccac gtttgactaa
     3601 ttgataagtc caaccacccg gacaagcccc aagatcgacc cctaccatcg tatcattaaa
     3661 gcgttttttc tcctctgctt gcggaataaa agttaaaatc gcctcttcta atttaagcgt
     3721 tgagcgacta ggtgcctcag ccgggaattt taaacgggga atccccataa aaaacggcga
     3781 tttattatgg ttgtacgcat agcccacata gcaagctccc ggacgagtaa ataaaatatg
     3841 caagctcaca ctaccctgca tattttccga tttccccaac caaccttgtt ttttcaatgc
     3901 cgaccgtaat ggcacagtaa atttacgaca gaaagttaat aattctttcg cttcgttggt
     3961 atccggtgtt tcgacaaata catcagaact ttggcgagga ttaagttcgg catattgggc
     4021 taaaatcggc gaaattcgat cattttcaga cagattttgc aacaaatccc caacaaccaa
     4081 catttggcga acaaaaataa gctgttcaaa ctttaacgct tgggctaatc gatctgcttc
     4141 ccctgcttga tagcactcaa aaatcacata gccactattt tctttaaggt tggcaaagcc
     4201 aaaaatgccc tgttgtgcag ctttatccgt gatttcgcct gctacctctt tttcaaaccc
     4261 tgctcggcaa tataaggcta atttattgaa cattaggctt ttctcacact gatataaatt
     4321 aacgcaatcc aaccaagcat aaagcagaga ccaccaatag gcgtaagcca atgaatagtc
     4381 ggcacattta acgccagtaa gtacaggttg ccactaaaaa gcagaatgcc taacgcccaa
     4441 ttgcttccga tgatgttaaa ggctttggct ctacaaacgg gtggattttg cccaaaattt
     4501 gcaatttgga ataaacctaa agctaaaatg gcaagggtgt gaaacatttg atatttaatc
     4561 cccgtctcaa tccagcctaa ggctttaggc gataattgag ccgataatgc gtggctggct
     4621 atcgccccaa atgccacagt aaataagccg ctgaatgcgg caattgctac aaatttgttt
     4681 ttcataagtt gaagataggt atgatgttag atggcttact atatcatatt atcgaaacca
     4741 acaagcggtg aaattttgca aaaaaattac aaaaaatcac cgtttgtatg cttaatggtt
     4801 caagataata tccacatctt ccgatttatc gtgaacccca aatctatcta ctaaggtttt
     4861 gctggcctca tttaatccga taatttctac ctcaacatca ctttttcgat atttcaacac
     4921 aactttatct aacgctgaaa ctgccgttac gtcccaaaag tgagcgtggg ttaaatcaat
     4981 gttgactttt ttcagttctg aacgggtaaa atcaaattgt gcgataaaat catcagatga
     5041 ggcaaaaaat acttgcccga taacatcata acgcaattcc tctttctcta tagcacttgt
     5101 tttaaccgcc atataacgtc caattttatt cgcaaagaat aatgccgaga gcaacacgcc
     5161 ggaaaataca ccaagggcta agttatgtgt ataaaccaca attgcaacag tgactaacat
     5221 cactacatta aagccgattg ggtgcgtttt tagctctttt aaggaatgcc aattaaaggt
     5281 gccgatagag accataatca tcactgcaac taatgcagcc atcggaatca ctctcaaaat
     5341 atcgctcaaa aagaccacaa aaatcagtaa taatattggc aatgccctgc cctttacatt
     5401 cacggttttt atcgctgtct gtctctgtca tttcatcaac aatcgttgcc gtcattaaag
     5461 attccaataa ccctactgcg gccaagctga aagaataagg caaaataatc cataaggtgt
     5521 ctaaattaag cggaatatcg ggtaataaaa acaccggtaa ggtatcgggt aattgcccca
     5581 tatccccaac ggtacgaaca tcaatgcctt gccataatgt gaaaagtgtt aaagcaataa
     5641 tggtcactaa tggtgaggga atgatttttc caatcaccgg tacataagga aaaagataaa
     5701 tgatagcaag ccctgctacc accagtgcat aagtatgcca agttgtattt tgtaactcag
     5761 gtagttgtgc cataaaaatt aaaatggcaa gtgcattaac aaacccaatc actacggctc
     5821 gtgccacaaa ccgcataagc gagccgagtt ttaaccaacc ggcaataatt tgcaacacgc
     5881 ctgttaataa ggtggccgct agcatatatt gtaaaccgtg atccctcact aagcctgcta
     5941 ataccagagc cattgcaccg gttgctgcag aaatcatcgc cggtctgccg cccacaaaac
     6001 tgataattac tgcaatacaa aatgaggcat ataaaccaat ttgtggatca acccctgcaa
     6061 taattgaaaa tgctatggct tctggaatta acgccaaagc caccactaaa ccagagagaa
     6121 catcacctcg tacatttgaa aaccattgtt gtttaattac cgtaggcgaa aattgctgaa
     6181 ataaagttgt cattattacc cttaaataaa aagaaaagcc gagcaaagtc ggctaaaaat
     6241 gaggcgagag agtagcaaat tagtgaaaag tcgtcaaata aacaagcggt cttctttcgc
     6301 tctttttttg caaaaaatag tagaaaaatg accgcttgga ttaattgcta ttcactaaaa
     6361 aaaggggctt taaacaccgt cacttcaggt gcatctccca catatttttc cacttgaacc
     6421 gtggtagtgt tcggtgcatt gccctgcccg agttttgatg aaccctcatt acgggttagc
     6481 acattcgggt tgccgttttt gcatagtgga gtatctgttt tgcctaaatc ttgcgggtca
     6541 taccaaccac cttcgtataa cgctactgtg ccttgaatga tgccatcagt caccactgct
     6601 cctgccaaca cctgccctcg cttgttaaaa attcgcacaa tatcaccgct tgtaatgcct
     6661 ctgtcagcgg catcttttgt gtgaattagc attggttctc tgccgtttac ctcgtaatat
     6721 tgacgtaatg aggagtaagc aagctggctg tgtaaacggt atttaatatg cggtgtaact
     6781 aatgccaacg gctcggcttc gttggttttg cctgaatatt cgtgatgttc aaaccaagtc
     6841 gggtgtcctt tacaatcttc ataattcatc ttggcaatgg tttcggagaa aatctcaatt
     6901 ttgcctgatg gcgttgccaa tttgtgttta atcggatcag tacgataatc ttgatagcga
     6961 acgaaagtat tattttgatg ttctgcctca aagctcaaca ctttattttc cgcccaaaat
     7021 gcctcgaaat ccagcaatgg cgtattagct ttttcccccg cctcaaaggc aacttggtaa
     7081 aattccttaa gccattccat ttcgcttttg ccttcggtaa atgcttgttc tttaccggct
     7141 cgtttcgcta attcggcaaa aatatcgtaa tcattcttcg cctcaaattg cggttcaacc
     7201 acctgtttca tcgggataat atgttttgct acataatcac cggcaacggt gagatcgttt
     7261 cgctcgtagc tggtggttgc gggcaataca atatctgcca ttcgagcggt cggtgtccag
     7321 taacattcat tgacgatcat cgtttccggc tgttgccacg ctttcactaa atagttggta
     7381 tccgggtggt gagcaaacgg attacccccc gcccaataga ctaatttgat gttcgggtaa
     7441 tgtaatgttt gcccgttgta atcataaggc tgattcggtt tgagcaacgc atcggcaatt
     7501 cgagacaccg ggaaaaacgg catatcgggg ttaggtttac ctgcattgat tgcccctaaa
     7561 cgaacaccgg aattaacatt tagcccattg gtagaataac gataatttaa gccgaaaccg
     7621 ccgcccggca agccaatttg cccgagcata gcggcaagag tcactaacgc ccagtggctt
     7681 tgctccccgt gttgcaggcg ttgcaagccc cagccggaca tcaacattgt gcggtgagta
     7741 acaaaatcat ttgctaaggt tttaatcacc tcctccggaa tgtcacaaat ttggctcgcc
     7801 cactctgctg ttttaggtaa attatctgct tttcctaaca cataatcagc aaattgctcg
     7861 aaaccaacag tatatttagt taagaagtcg tgatcgtgct tgttttcagt aataagggtg
     7921 tgggcgatcc ctaaaatcag tgcaacatcc gtgccggtat taataggcaa ccactctgcc
     7981 tctaaaaatt gacaggtctc gcttttcacc gggtcgatac aaataatccg tttaccgctt
     8041 gcttttaatt tggcgagata atcaatcccc tccggttcgg cagaggtcca cgcaatgcga
     8101 agtgtattca gtggattaga cgaccaaatt accaataatt ctgtgctttc tacaattgtg
     8161 tgccaactgg tttgttgagc atacacctca atattgccta atacataagg cataatcact
     8221 tgcaccgcac cggtggaata atcgccttta gtattggtaa agccgcctgt gacgtttaaa
     8281 taacgttgca aaagcgtgcg agaggcgtgc agtgaaccac tgctatacca gccgtaagaa
     8341 ccgccgaaaa tggattcgct gccatattgc tctcttaccc gttggatttc gccggaaacc
     8401 agctcaaagg ctttgtccca agagattctc acccacttat ctcgccctcg caaagtggtg
     8461 tctttattcc cttccaagta gcctttccgc accatcggat atttcacccg aaccgggcta
     8521 tagagctgat ccgccaccac atcttgcaat tcgttttggt gatttttcgc taaactgccc
     8581 tctgatttca ccacttttcc gttttccacc gttacattta atgcacccca gtgggcggcg
     8641 gtggtaatgg tatttttcgg tttatccaaa aagacaaact tccctttttc taatgctgtg
     8701 ttcatttaaa ttaatgcctt ttctgttaca aaattgagag gaatttactg gattaagcca
     8761 aaagttgcaa ccacaagcgg ttgtttttag ccaaaaattt gcaaaacaaa acccacctaa
     8821 aaaggtgggc ttcaaggaag ttaaacggca acttgaacga ttacattgtc cgcttttttc
     8881 acataactat tgatttggtc aaagttcata tagcggtaaa tatcgtcctt atctttctgc
     8941 aagttattca tatagtctag gtactcttgc ggtgtcggca atttacccaa taacgcagaa
     9001 actgcggcta attctgctga ggctaaatac acatttgccc cttgccctaa acggttcggg
     9061 aagtttcggg tagaggtaga aaccacatta gcattatttg ccactcgggc ttggttaccc
     9121 atacagagag aacagcccgg catctctacc cttgctccgc ttttgccgta aatgctgtaa
     9181 tagccctctt cggtcagcaa gcctgcgtcc attttagtcg gcggagcaat ccataattta
     9241 gtcggcaatt cgccctgtgc ttggcttaac agtttacctg ccgcacggaa atgcccgata
     9301 ttagtcatac aagaaccaat aaagacttca tcaattttat cgccctgtac ttgagaaagc
     9361 aggcgagcat cgtcagggtc attcggtacg cacacaatcg gctctttgat ttcatctaag
     9421 ttgatctcaa tcactgcggc atactccgca ttttcgtctg cctctaaaag ctccggatta
     9481 tccaaccacg cttgcatatt ggcgatacgg cgttctagcg tgcgtttatc gtcatagcct
     9541 tccgcaatca tccattttaa aagcgtaata ttagaattca gatactcgat aatcggctct
     9601 ttgttgagct tgatggtaca ggctgcagca gagcgttcag cagaagcatc agaaagctcg
     9661 aaggcttgtt cgattttcag atcttccaac ccttcaattt ctaaaattcg accggagaaa
     9721 atatttttct tacctttttt ctccaccgtc agcaagcctt gctgaatggc ataatacgga
     9781 atagcgtgaa ccagatcccg taaggtaatg cccggttgca ttgtgccgga aaaacgcacc
     9841 aagaccgatt ccggcatatc taacggcatc acccctgttg ccgcagcaaa ggcaactaag
     9901 cccgaaccgg cagggaatga aatcccgatt gggaaacggg tgtgggaatc gccgcctgta
     9961 ccgacagtat ccggcaataa catacggttt agccaagagt gaatcacgcc atcacccggg
    10021 cgaagtgaca caccgccacg gttcataata aaatcaggca aagtgtggtg ggtaattacg
    10081 tccaccggtt tcgggtaagc ggcagtatgg cagaacgatt gcatcacaag atctgccgag
    10141 aagcctaaac aggctaaatc tttcagctca tctcttgtca ttggtcctgt ggtatcttgt
    10201 gaaccgacag acgtcattcg aggctcgcaa tattgccccg gtcgaacgcc ttctacgcca
    10261 caagctcgcc ctaccatttt ttgagcaagg gtgtagcctt tgttactctc tgaaaccgac
    10321 tgcggtttaa taaatacatc actttcaggc aagccaagtg ctactctggc tttatgggtc
    10381 aaaccacgtc cgataatcag cggaattcgc ccgcctgcac gcacttcatc aagcaatact
    10441 tcggttttta gctcaaattc ggctaagact tcatcggagt tgtgtttgca aattttgcct
    10501 gcataagggt aaatgtcgat tacatcgccc atattcaggt tggttacatc cacttcgatc
    10561 ggtaaagaac cggcatcttc taatgtgtta aagaaaatcg gggcaatttt accgcctaac
    10621 accaccccac cggcacgttt gtttggaatg taaggaatat cttcccccat aaaccaaagc
    10681 acggagttgg ttgcggattt acgagaagag ccggtgccga ctacatcacc gacataggct
    10741 aacgggaaac ctttttcttt taatgcttcc agttgcttaa tcgggccggt atgaccgttt
    10801 tcatcgggga aaataccgtc acgttcattt ttcagcattg ctaatgcgtg aagtggaata
    10861 tcagggcgag accaagcgtc ttgagccggg gaaagatcat cggtattggt ttcgcctgtg
    10921 actttaaata ccgttaccgt taatttttcg gcaagtttcg ggcgagaggt aaaccaatcg
    10981 gcattcgccc aagattccaa tacttgttgt gcaaacggat taccctgatc tgcccgttct
    11041 tttacatcgt ggaaattatc aaacatcaat aatgttttag ataaggcttc taccgcaatc
    11101 ggtgcaagct cagggttatc caacgcagac aataaggttt caatgttata accaccttgc
    11161 attgtgccga gtaatttcac tgcgtgagca ggcgaaatga gcggcgatgt ggcaacccct
    11221 ttggtaatat cggctaaaaa ggcggcttta acataagcgg cttcatcaac acctgccgga
    11281 atacgattgg taaaaagatc caataaaaag accgcttgtt cagccggtgg gtttttcaat
    11341 aattcaacca gttgagccgt ttgttccgca gaaagtggct gaggcacaac acccagtgcc
    11401 gcacgttcat caacctgttg ttgataattt tctataaaat tttccatcat cattccctct
    11461 ccaactttac atattggcaa taatgtcttg tgcaaattct gaggttgagc gtagagttac
    11521 cccctccagc atttccgcaa aatcaaaggt gacagtttta ttggcaatgg ttttagacac
    11581 cgcttttacc actaaatcag ccgcttcaac ccaacctaaa tggcgtaaca tcatttcccc
    11641 acttaaaatt aatgacccag gattgccttt attttgccct gcaattttag gggctgtgcc
    11701 gtgtgtggct tcaaaaatag ccgcttcaaa cccaatattc gctcccggtg aaataccgat
    11761 tccgcctact tgtgcggcta aagcatcaga aatatagtcg ccgtttaggt tcagtgtagc
    11821 aatcacatca tattcggttg ggtgtaacaa gatttcttgt aaaaaggcat cggcaatgct
    11881 gtcttttata atgatttcct caccggtttt cggattagtc aagctcatcc aagggccttt
    11941 atcaattaat tttgccccaa attcttccgc aacttggtag ccccactctt taaatgctcc
    12001 ttcggtaaat ttcataatgt tacctttatg cacaagcgtg agcgatttac ggttgttatc
    12061 aattacatat tgcaatgcag cacgcaccaa gcgttgtgtg ccttgcttag aaaccggctt
    12121 aattccgata ccgcaatctt cggtaaagcg gatttttttc acgcccatct cttgttgtaa
    12181 aaattcgatc actttattgg cttcaggcga accggcaacc cattctacac cggcataaat
    12241 atcttccgag ttttcacgga aaatcaccat atccaccagc tcagggtgtt taaccgggct
    12301 tggcgtaccg tcataataac gaattgggcg taagcagttg tataaatcta atccttgacg
    12361 catcgccaca tttaaagaac gaataccgcc acccaccggt gtcattaaag gacctttaat
    12421 cgccacgtga tattggcgga taagctctaa ggtttcatcc ggcaaccaag tgttctcacc
    12481 atataattta ttcgcctttt cgcctgcgta aatttccatc caagcaattt ttcgcttgcc
    12541 ttgataggct ttttctaccg ccgcatctag cactgctttc attgcaggag taacatcaac
    12601 accgatgccg tcaccttcaa taaatggaat aatcggatta tccggaactt gtaaagaacc
    12661 gtcttggttc agttgaatag tttcgccttg tggaatttgg acttgtgttt gcattgattt
    12721 tacccccgta atgacgaaaa agtagtgacg aaaaatgaat gttgacaatc agccaacaat
    12781 ggattaacta taaacagtaa atttctaaat gtaaataaag caaaatgggc tgagagagaa
    12841 tttgtgatct aacgcacatt tatgtaaata aaatgtaaaa aatcgttgtg attcttttgg
    12901 aaatcatcta gtttatctta taaatctcaa ataaatagga gtaagctatg tcaaaagcaa
    12961 cattaacact cgaaacaggt gaaaaacttg aactcaatat gcaaaaagga accttagggt
    13021 atcaaacgat tgatattcag cctttcttaa agcataagtt atttgcttat gatcccggat
    13081 tggtttcgac cgctgtatgc cgatccaata tcacttatgt tgatggcgat gaaggggttt
    13141 tactctatcg aggctacccg attgaccaat tagccaaaca ttctgattac ttagaagtcg
    13201 gttatatgct gttattcggc gaacgcccta ccaaagaaga atacaaagac ttcgttcaac
    13261 tcatcaaaaa acacactctt gtacacgaac aactaaccaa attcttctcc ggtttccgcc
    13321 gagattcgca cccaatggcg gtgatgtgtg gggtaagtgg agctttggct gccttctacc
    13381 acgacgccat tgatgtaaac aaccaagccc accgtgaatt aaccgccatt cgtttgttag
    13441 ccaaaatccc aacccttgcg gcgatgtgtt ataaatactc tatcggtcag ccgtttatgt
    13501 tcccacaaaa ccacttatct tacgccggca acttcttata tatgatgttt gccactcctt
    13561 gtgaaccgta cgaagtgaac cctgtgttag agcgtgcgtt agaccgaatt ttcattttac
    13621 atgcagacca cgaacaaaac gcttcgacct caaccgtgcg aaccgccgct tcatcaggtg
    13681 caaacccatt tgcttgcatt gctgccggta ttgcctctct ctggggacct gcacacggag
    13741 gagcaaatga agcctgtatc aatatgttga aagaaatcgg cactgtggat cgcattcctg
    13801 aatttattgc tcgagccaaa gataaaaatg acccgttccg cttaatgggc tttgggcatc
    13861 gtgtctataa aaactacgac cctcgtgcga aagtaatgcg tgaaacctgc cacgaagtgt
    13921 taaaagaact gaacattgat aacccactat ttgaagtggc attggaatta gaacgtattg
    13981 cgttaagcga cccttatttc attgagcata aactttatcc aaacgtagat ttctactccg
    14041 gaatcgtgct aaaagccatc ggtattccaa cctcaatgtt taccgtaatg tttgccctag
    14101 ccagaaccgt tggctggatt gctcactgga aagagatgta tctccaaggc aatatcaaaa
    14161 tcgttcgtcc acgtcaaatc tacaccggac atactaaacg tgattttgag ccaatggata
    14221 aatcataaga ttggcaaaaa atcgaaaaat tttaaccgct tgtttccaca agcggttata
    14281 ttttgcataa aatttgcaaa tcaggctaat ttatttagca gttgtgttct aacatcttga
    14341 ccattttcat cgctttttac agccataata aataagcctt ttccttgact taatttctcc
    14401 caaagattgc caattaaggc tttttcttta gaatcttcat tactttttaa ttgttcccct
    14461 ttatattcca caattaaaat tcgaccatca ataagctcta caataaaatc agggtaaaaa
    14521 ttctgatgag ctaatggtaa agaaaaccct ctttttacag gatttcttaa ccaatcatca
    14581 gaaaaactca gttgctgctg attaaaatgg taagaaaccc gtttatcttc cacatcaatt
    14641 tcaaaacttt ggctattttc ttgtaatcta aatccatcaa gtttggctgg ataatccaat
    14701 aaattccaac tttggtaatc taatagcact tgtgaatcag ctaagtcgaa ttcgccttga
    14761 atattcatac acagttgagg tattacttta aatatttccc ctttttcggc aggagaagat
    14821 aatatttcaa ctctattctg gtgaatttgt aactgttgct caatttgctc ttttttctta
    14881 cctgttgcag ttcgaatcaa cgctttttct aacttttcac ttaaattacc ttttacttgc
    14941 actaaaatgt gaccttcttg ctcggtaatt ttaagttgag aacgttttgc ttcgcttaaa
    15001 tcagacattt cagggagttg cgttaatgct aaaactgttg tcggtgtata gaataaatct
    15061 ccttcgtttc caatccaatt ttcttgttgt gggatacgaa gcatttcagc tacttctaat
    15121 gcttcaaacc ccattccaat caatttatct tgtaaattac gagccgtttc gccgaacgac
    15181 ttagaggaaa gcggagcata agcacgattt aaatcttcaa tttgacggtg tttagcataa
    15241 ggcattcgca atactcgccc taatagctgc tccgcttcct tgctagagga aacattttgt
    15301 actgagcaaa aaatataagc aaaagggcaa tcccaccctt cttttaatgc ctcaaccgtg
    15361 atgatgtaat tgatcttgca ttgtggatta aataaatcga tattatctaa ttcgtgttga
    15421 ttacctatca caatggcaat ctcttcttca tcaattttta actcatcaat taaatactgt
    15481 tttaagactt ctactgttac tttgccgttt ttcggctcag cttgaaacaa taaatcggac
    15541 gaacgtactc gctctcatac tgtgcttttt gtgctaatgc tcctctattg attacagccc
    15601 catctattgc ttgttgccag ttgtgatgtt cggtcagcac aataggcaat ttgatcatct
    15661 cttctgcttt tagatggctt gccgaaacgt gatacaacac attacttcct gcttttctat
    15721 ctgtgtttgg cgtagcagta aattctaaaa tagctgatgg ggaaagttga gatagcacat
    15781 caaaagagag tgaagtccga gcattatgtg cttcatcaac aatgaccaaa ggctgataag
    15841 ctcgcaacaa atttgcaaaa gaacacttaa ttttgcccgt ttgtttggag gttaaaccgt
    15901 tctcttgtag atcagtagtg gaaatctttt ctaaatttgc ctgaatatgg ggtagtaaac
    15961 gctcaaaatg agctgttaat ttttcattaa aagcatagat ttttcgccca tcttgatttt
    16021 ctacccgaaa attttgaata gtagaaacga ttacaatcgc cttattacca aaatcttgtg
    16081 ggcgaagtaa atcaaaatct tcagactcaa taaccattac ttctcggtta aaagttttat
    16141 caagtactgc acggtaaggg tgttgcggat tttttaatgc ttctgtagtt tgggttttaa
    16201 ttgtacgaga aggcactggc cacaaggtaa ccgggaaatc gcaatccaaa tactgctttg
    16261 caatacgagc aatactatgc gaggctaaca acgttttacc gccaccagtt ggaattcgta
    16321 cacaaacata aggcacatca cgcaaattac tgtgttcact tgggatcttg taactatatt
    16381 caggttgaat ttggctaaat gcggtttttg catcagattg caaacaagcc gaaaaatagt
    16441 ggctgacacg gtttaatgcc tcattttggt aattttttaa tttcattttt ttctcctact
    16501 attaacgaga cattacatca tatggaatct gtttaaatgt aattttcttt tcagctaact
    16561 gcacttctcc taaacggcac gcttcgccat ataccacaat atccattccc tgttgaataa
    16621 attcagcaaa gtatggtaac tccgccatta attttcgtgt cagaacatta ccactctgcg
    16681 gacgtttatc gcctaaaatt ccgttatata acaaatagta ggctttgccg ttgaaagtgc
    16741 cgacaagcgg tgatttttcg ctgttttttt gcaaagggaa atgattttct aaataccaaa
    16801 tatgggcggc taaatcgtca aaacgaatgt tcggattaag tgaaccgaat gcgtcaaata
    16861 cttcctcgcc taactcacaa aagcgaaacg atccaccacc ttgccaattt actgcttttg
    16921 aaataccgcc ttgctcacct tcaattactt ttttcaaccg tgggacaaca tgggttttag
    16981 catgttcgcc aatctcaata ccgatataac gacggttcat tttatgagca actgctgcag
    17041 ttgtacctga gccaagaaag ctatcgagga cgagatcata tggttcagtc gatgcttcta
    17101 atacaaatta gattaatttt tcaggtttag gataatcaaa tgaatcttct gcaatatcct
    17161 ccccaaataa ttctagatgt tcactagcag agtcttcatt tgttgccata tcataatgag
    17221 ctctgctaat taagttatga atttttttct tttccgcact tcgctcaaat actctccttg
    17281 gtcgaaagtc taaacttttt ataatatagt aatcaccatt ttttaattgc tcatcaatac
    17341 ttttttggct ataccgccat tcaccttcaa tttctaccgt atttttattc cattgatctt
    17401 caataattaa ttccgaaatc aacgtaattg aactcgtttt ttta
//
LOCUS       DANLXD010000054        16749 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.054, whole genome shotgun sequence.
ACCESSION   DANLXD010000054 DANLXD010000000
VERSION     DANLXD010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16749
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.054"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..342)
                     /locus_tag="PXD18_001469"
     CDS             complement(<1..342)
                     /locus_tag="PXD18_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL6301901.1"
                     /translation="MPFYAGQVKCIFIDPPYNTKSAFTHYDDNLEHSIWLSMMYPRLE
                     ILRELLAEDGSIWITLDDNESHYLKIMLDEIFGRKNFISNLIWEKKRKPSFLGKVGKV
                     TDNLFCYAKNKN"
     gene            complement(381..619)
                     /locus_tag="PXD18_001470"
                     /pseudo
     CDS             complement(381..619)
                     /locus_tag="PXD18_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252355.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methylase N-4/N-6"
     gene            complement(760..3246)
                     /gene="torA"
                     /locus_tag="PXD18_001471"
     CDS             complement(760..3246)
                     /gene="torA"
                     /locus_tag="PXD18_001471"
                     /EC_number="1.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
                     /protein_id="HDL6301902.1"
                     /translation="MKKQDNIDVSRRGFLKNSSLSLAAGAGLASGTTGVVGALASTSA
                     KAAEMKTVVTAAHWGPLGVVVENGKVVKSDSVFEISVPNELQHVVADQVHGETRVKYP
                     MVRKGYLEGNKDTTLRGRDEWVRVSWDKAFELVANEMKRVREAHGANAIFGGSYGWYS
                     SGALHASRTLLQRYLNVTGGFVGVKGDYSTGAAQVIMPHVLGTIEVYEQQTSWEVILE
                     SSDIVVLWSANPLNTLRIAWTSTDQQGIEYFKKLKESGKRIICIDPVKSESCEFLGAE
                     WVPVNTGTDVALMLGMAHTLVAEGKHDQAFLKKYTTGFEKFEEYLLGKTDNQPKDAKW
                     ASQICGVPEETIKKLATDFQSKRTMLMAGWGIQRQRHGEQGHWMLVTLAAMLGQIGLP
                     GGGFGLSYHYSNGGVPSATGGILGSITANPAVEAGAKTWLDETSKSSFPVARISDALL
                     NPGKTIDYNGTQITYPDIKIVYWAGGNPFTHHQDTNTLVKAWQKPDTIIVNECHWTPT
                     ARMSDIVLPATTSYERNDLTMSGDYSMMNIFPMKQVVEPQFEAKNDYDIFAELAKRAG
                     KEAEFTEGKSEMDWLQSFYQTAFEAARKNRVIMPKFEKFWQENKPLSFKASDKAKKWV
                     RYEEFRNDPLLNPLGTPSGKIEIFSEVIAKMNYDDCKGHPTWMEHEEYSGKTTAEEPL
                     ALVTPHSKWRLHSQLAYSSLRKQYAVNDREPVLIHTEDAAARGITSGDIVRIFNKRGQ
                     VLAGAVVTDGIIKGTLALHEGAWYDPLDLGTSEQPLCKNGNPNVLTRDEGTSKLAQGN
                     SPNTATVQVEKFTGQAPEVTVFKEPKYTQG"
     regulatory      complement(3265..3461)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            complement(3465..4580)
                     /locus_tag="PXD18_001472"
     CDS             complement(3465..4580)
                     /locus_tag="PXD18_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HDL6301903.1"
                     /translation="MAKMKKIAVFVGIMALGAAVLGGTQYAMKATSSTEFCVSCHSMT
                     HPQAEWEGSVHFSNRKGIRAECSDCHLPQDGLHYVKAKIIALKDVWHTVVTNKLPDQE
                     AYEAHRLEMAQRVWAEMKENDSMTCKSCHSFDAMVLSEQTEAAQKMHKLAQETNQTCI
                     DCHKGIAHFMPDVPVDNAAAMGELAKHGAEFSTNDKTLYTLAMTPVQLAQGGEIRLLP
                     YAELHQWTAEGEQVKATVNGWQQEGAESVVYMDLGKRIMVALLPDDAQSKVNVTKTVF
                     DNVTNSNWKEINFEITAPKNAVTANITALNHFGDNLNQTHCSGCHAPIGAEHYTANQW
                     IGVVNSMKDRTSMSADDVRAVTIYLQRNAKDVAGSSH"
     gene            complement(4722..6473)
                     /locus_tag="PXD18_001473"
     CDS             complement(4722..6473)
                     /locus_tag="PXD18_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6301904.1"
                     /translation="MDKRSRWSCLVNEQGEISEWEDKAGADYFAELPQICHYAQALLY
                     SDKNSLQFYYSSNHQWLKISLERHQSFVLTQAEHTDLPYGLSKREIELLTLISSGLSN
                     EDIANELCISKRTVDKHIENIFAKTHTKSRTLLAVFAITEHLICLPTPGKLTQSILAS
                     FNIEQLALQIIAKKQPLVTASTRHEPPIFTINHHHSRPIIIGVPYVEQGIGQIDTREL
                     LNGTQLAVETINQQGGIHGREVQVATAGFYVKDKASILQAYHHLFDQEVDAISTAYAC
                     YLPEVHELIATKGIPYLHIATHSGSNKLAQNLPNQRIENMFQVCASDVTYGLGISHFL
                     QYYRYHYAPWLQNKTVMVVTVSWQKVDIGIESLTLSLREQGWNVDYLELTQEQDNYAT
                     LMAQVHNLAPSIIVFASYFAEDIVQFYQTFIRNPTNAIIYSIYAPSAFLPHEKLCEGV
                     LWSTNSGLSENYLGRQFSQHYERFFGKSPTYSQASIAYDQANILANAWKQSVSPRHFK
                     AVSNAIRLQPHYGVNGTYYFNTDSQIGLTYAETHDLSISLPQLVYQIQQGQSRVIAPE
                     LFANAQFILPPWFSEKA"
     regulatory      6637..6793
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            6782..7807
                     /gene="moaA"
                     /locus_tag="PXD18_001474"
     CDS             6782..7807
                     /gene="moaA"
                     /locus_tag="PXD18_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HDL6301905.1"
                     /translation="MQSIIPIKNVGDDVVSGLVDRFQRQYTYLRLSITDVCNFRCNYC
                     LPDGYKPPSHKQTFLSVDEIQRVAKAFANLGTEKIRITGGEPTLRKDFLEIAHTISQT
                     PGIRKVALTTNGYRLERDVELWQQAGITDINVSVDSLDPRQFQLITGENKLQSILKGI
                     DKAFEIGYPKIKVNAVLMKQYTAPELDKFLTWIKDKPIQMRFIELMETGEMDSFFQAQ
                     HLSGQSVMTRLLQEGWQLQPKAMSDGPAKVLSHPDFKGEIGLIMPYEKNFCASCNRLR
                     VSALGKLHLCLFGEEGIDIRDLLASDEQQLQLETRLKSSLQGKREHHYLHIGDSGVRN
                     NLASIGG"
     gene            8308..8784
                     /gene="moaC"
                     /locus_tag="PXD18_001475"
     CDS             8308..8784
                     /gene="moaC"
                     /locus_tag="PXD18_001475"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HDL6301906.1"
                     /translation="MTTFTHINQNGEANMVDVSMKQETVRIARAEAFVRMNAETLQMI
                     VSGNHHKGDVFATARIAGIQAAKRTWELIPLCHPLLLSKVEVQLEALPESNQVRIESL
                     CKLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMIIENVRLLSKSGGKSGDFKVD"
     gene            8777..9022
                     /gene="moaD"
                     /locus_tag="PXD18_001476"
     CDS             8777..9022
                     /gene="moaD"
                     /locus_tag="PXD18_001476"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005631889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase sulfur carrier subunit"
                     /protein_id="HDL6301907.1"
                     /translation="MIKILFFAQVRELVATDRLDVEPTFTTAEALREHLSQQGKKWQL
                     ALEKGKLLVAINQTICPLETEIKDGDEVAFFPPVTGG"
     gene            9024..9479
                     /gene="moaE"
                     /locus_tag="PXD18_001477"
     CDS             9024..9479
                     /gene="moaE"
                     /locus_tag="PXD18_001477"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase catalytic subunit MoaE"
                     /protein_id="HDL6301908.1"
                     /translation="MFETLIEVQEAEFDQNRIYQWLSEQHSVGAATLFIGKVREMNLG
                     DNVSGLFLEHYPAMTKKALQEIVAQARTRWDLQRVAVIHRIGQLHTGDEIVLVGVSSA
                     HRGDAYHANEFIMDYLKTKAPFWKREQTQAGERWIEGRESDQQAAKKWQ"
     gene            9512..9994
                     /gene="ybeY"
                     /locus_tag="PXD18_001478"
     CDS             9512..9994
                     /gene="ybeY"
                     /locus_tag="PXD18_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HDL6301909.1"
                     /translation="MENLYIDLQIACENTENLPSEQQFYTWVQKALAVEAKTDDFPES
                     EITIRIVDEAESHELNLTYRGKDKPTNVLSFPFEAPEGIEMPLLGDLVICRQVMEKEA
                     EEQGISAESHWAHLAIHGTLHLLGYDHIEEDEAVEMESLETEIMQSLGYEDPYLSEKI
                     "
     gene            10072..12090
                     /locus_tag="PXD18_001479"
     CDS             10072..12090
                     /locus_tag="PXD18_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(Met) cytidine acetyltransferase"
                     /protein_id="HDL6301910.1"
                     /translation="MRTIAIITSPNNADFIQQGYFYIPENHQLKAIPFSNAKTILGQE
                     YPFAIYTMQAENGVNFNLDAFAILAGTIQENGTLFLLCPQWDNLENELDFDALRWNEN
                     QAIACPNFYQHFKQLVAKFGFEVRTNLPKLPATSGQIPSKIYQLTQEQQNILQNLPLD
                     PADIHLITAPRGRGKSTLAGRLAKALPAQNKVLITARSYSALPSFWRSAEQKIPFFAP
                     DNLIEQVKSKNISPNQWLFIDEAASLPLPILHTLCAYFEKVVLTTTTQNYEGTGRGFE
                     LKFPVMLDKPFKHWTLSQPLRWSENDPLEAFVTELLLLSEEKSPLFSKEGKGEIYSLR
                     SHYVPLLKQRSNAKRLWQKQLSKNISYSNKHLQEKIAFYHLLANAHYKTTPTDLRRLF
                     DGENQLLFSQQENEQLIGGIWAMQEGGLDEKLTQAIWLGERRPQGSLVAQYLCFQGNL
                     PQACKLHSIRISRIAVLPEKQNQGVGKRLISQFILQNSVEKRPLDFISVSFGLTTPLH
                     AFWQSCGFQLVQITPNKEASSGYQSAMMIYPISEQGKLFAQQATQAFARDFALQPFFT
                     EICEELQNFEQFRPLATHNLDERDWKNLTAFAHGKRTFSAAYVSLKRLYLSDKARFSE
                     LDIFERKGQKISKMEVENYRKLVLQNLNNKSFKIIYRFYYIFLCFCSC"
     gene            12155..13345
                     /locus_tag="PXD18_001480"
     CDS             12155..13345
                     /locus_tag="PXD18_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000462687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HDL6301911.1"
                     /translation="MFSHIQAAPADSILGLGEAFKADSREGKINLGIGVYMTDEGKTP
                     IVKAVKEAEKRLLETENSKNYLTIDGVQAFNAATQALLFGEGAEVITSGRAKTAQSLG
                     GTGALRIAAEFIKRHTNAKNVWISTPTWPNHNGIFDAVGVNVKGYRYYNKETNGLDWE
                     NLIADLSQAEAGDVVLLHGCCHNPTGIDPTPAQWEQLAALSAEKGWLPLFDFAYQGFA
                     NGLEEDAYGLRAFVKNNRELLVASSFSKNFGLYNERVGAFTLIADNADDANRAFTQIK
                     SIIRVLYSNPSAHGASAVAVALADPDLKAQWIAELDEMRNRIKEMRSQLVQKLKEKGA
                     NKDFSFITEQNGMFSFSGLTPEQVDKLKDEFAIYAVRSGRINVAGITSKNIDALADAI
                     VKVL"
     gene            complement(13452..14753)
                     /gene="folC"
                     /locus_tag="PXD18_001481"
     CDS             complement(13452..14753)
                     /gene="folC"
                     /locus_tag="PXD18_001481"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HDL6301912.1"
                     /translation="MNTLSIPKATDSLETWLSYLEQAHSKPIDMGLDRIRKVATELDL
                     LKPAPYVITVAGTNGKGSTCRLLEVTLLKAGFRVGVYSSPHLIHYNERVRINGEVLPD
                     ADHVQAFAKINAKKTASLTYFEFSTLSAFELFKQNQLDIVILEVGLGGRLDATNIIDP
                     SLAVIISIDIDHVAFLGDNREDIGREKAGIFRENIPVVIGEPDCPHSIKQIADSLNCH
                     AFYRGKDWQFEIKNNLFHWYSEEKSFTDLPIPLIPIPNAGTALAVLMQLPFEIDEKII
                     RQALNEAQMTGRFQTLTDTDFTHFSQPKPAAKVIIDVGHNPHAARYLADKLRELKQPN
                     QKIYAVFSALEDKDLSGIVEPLANIIDEWHCAGLDCWRGQTGEAVLAKLVNVLPNSTA
                     CSYENVAQASRVLFETANENDIVLVFGSFHTVADFMLWLET"
     gene            complement(14763..15659)
                     /gene="accD"
                     /locus_tag="PXD18_001482"
     CDS             complement(14763..15659)
                     /gene="accD"
                     /locus_tag="PXD18_001482"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HDL6301913.1"
                     /translation="MSWLDRILGRDSSSSSNAKSKVPEGVWTKCTSCEQVLYSEELQR
                     NQQVCPKCDHHMRIDARTRLLNLLDKDSAVEIAADLEPEDVLKFKDLKKYKDRLTAAQ
                     KQTGEKDSFIVLAGTLHNMPVVTASFNFEFMGGSMGSVVGAKFVKAAEKALAEKIPFI
                     CFSASGGARMQEALFSLMQMAKTSAILAKMKEQGVPFISVLTDPTLGGVSASLAMLGD
                     VNIAEPKALIGFAGPRVIEQTVREKLPEGFQRAEFLLEHGAVDMIVHRKEMRDTLSRL
                     CAKLTNQPTPFKVAELVVENAE"
     gene            15968..16749
                     /gene="mazG"
                     /locus_tag="PXD18_001483"
                     /pseudo
     CDS             15968..16749
                     /gene="mazG"
                     /locus_tag="PXD18_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600778.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
BASE COUNT         4885 a         3510 c         3478 g         4876 t
ORIGIN      
        1 atttttgttt tttgcatagc aaaataaatt atctgtaact ttaccaactt tgcctaaaaa
       61 agatggtttc cttttctttt cccaaattaa gttagaaatg aaattcttcc gcccaaaaat
      121 ttcatcaagc ataattttca aatagtgact ttcgttatca tcaagagtga tccaaattga
      181 accatcttcg gcaagtaact ctcgcagaat ttcaaggcgt ggatacatca ttgaaagcca
      241 aatggaatgc tctaaattat catcgtagtg ggtaaaggcc gattttgtgt tatagggagg
      301 atcaataaaa atacatttga cttgccccgc ataaaagggc aaaagagatt ttaaggctga
      361 taaattatca ccctgaataa ttaaattttg cttgacttta gataaggttt cagcagaagc
      421 tgagctgtcg gctgtcggct gtcggctgtc ggctgtcggc tgtcggctgt cggctgtcgg
      481 ctgtcggctg tcggctgtcg gctgtcggct gtcgggcaat attatgcgag aagtccggca
      541 actcacgcaa taggcaatat ggggtttgtt ttgctttttt gacggcttct tctttgccgt
      601 accaagtaag ggttgtcata aaatgcacct gaaaagtaaa agtggattat tgtaacaagc
      661 ggtcaaaaaa atagaaagtt ttacaaaaaa ttaagcaaat ttaaccgctt gcaacataga
      721 aaaggcacag ttttatactg tgcctttggt tatatgaaat tagccttgtg tgtatttagg
      781 ctctttaaat actgttactt ctggtgcttg tccggtgaat ttttcaacct gtaccgtagc
      841 ggtatttggt gagttaccct gtgctaattt tgatgtgcct tcatcacggg ttagcacgtt
      901 agggttgccg tttttacata gcggttgctc gctggtgccg agatcgagcg gatcgtacca
      961 agctccttcg tgcaaggcta atgtaccttt gataatgcca tctgtcacca ccgcaccggc
     1021 taatacttga ccacgtttgt taaaaatacg tacaatatca ccgcttgtaa tgccacgagc
     1081 ggcggcatct tcagtatgga tcaacaccgg ctcacggtca ttaaccgcat attgtttgcg
     1141 taatgatgag taagctaact ggctgtgtaa acgccattta gagtgtggag tcaccaatgc
     1201 caacggttct tctgcggtgg ttttacccga gtattcttcg tgttccatcc aagttgggtg
     1261 acctttacag tcatcataat tcattttggc aatcacctca gagaaaatct caattttgcc
     1321 ggacggtgtg cctaatggat ttaggagtgg gtcattacga aattcttcat aacgaaccca
     1381 ttttttcgct ttgtctgatg ctttaaaaga aagtggttta ttctcttgcc agaatttctc
     1441 gaatttcggc ataatcacac gatttttgcg tgctgcctca aatgcagttt gatagaaact
     1501 ttgtagccaa tccatttcag atttgccttc ggtaaattcc gcttctttgc ctgcacgttt
     1561 ggctagttcg gcaaaaatat cgtagtcgtt ttttgcctca aattgcggtt cgaccacctg
     1621 tttcatcggg aaaatattca tcattgaata atcgcccgac atagttaagt cattacgctc
     1681 atagctggtg gttgccggca gcacgatgtc agacatacga gccgttggtg tccaatggca
     1741 ttcattgacg ataatagtat ccggtttttg ccacgctttc accaaagtgt tggtgtcttg
     1801 gtggtgggta aacggattac cccctgccca atagacaatt ttgatatcag gataagtaat
     1861 ttgtgtgcca ttgtaatcaa tggttttgcc cgggttgagc agtgcatcgg aaatacgagc
     1921 caccgggaat gaagattttg atgtttcatc taaccaggtt ttcgctccgg cttctactgc
     1981 cggatttgct gtgatagagc ctaaaatgcc ccctgtggca ctcggcacgc cgccgtttga
     2041 gtaatggtag cttaaaccga aaccaccacc cggtaagccg atttgaccta acattgcagc
     2101 tagggtgact aacatccaat gcccttgttc accgtgtcgt tggcgttgaa tcccccagcc
     2161 tgccattaac attgtgcgtt tagattggaa atcagtcgct aattttttaa tggtttcttc
     2221 cggcacacca caaatttgac ttgcccattt tgcatctttc ggttgattgt ctgttttacc
     2281 gagcagatat tcttcaaact tctcaaaacc ggtggtgtat tttttaagga atgcttgatc
     2341 gtgtttgcct tcagcgacta aggtatgagc cataccgagc attaacgcaa catcagtgcc
     2401 ggtgtttacc ggtacccatt ctgcacctaa aaattcgcaa gattcacttt ttaccgggtc
     2461 aatacagata atgcgtttcc cgctctcttt gagttttttg aagtattcaa taccttgttg
     2521 atcggtagaa gtccacgcaa tgcgtagcgt atttaacggg ttagctgacc aaagcaccac
     2581 aatatctgaa ctttctaaaa tcacttccca actagtttgc tgttcgtaca cctcgattgt
     2641 acccaagacg tgtggcataa tcacttgagc agcaccggta gaatagtcgc cttttacacc
     2701 aacaaatccg ccggtaacat ttaaatagcg ttgtaacagt gtacgggaag cgtgtaatgc
     2761 cccagaacta taccaaccgt aagaaccacc aaaaatagca ttcgccccgt gagcctcacg
     2821 aacacgtttc atttcattcg caactaattc aaatgcctta tcccacgaaa ctcgcaccca
     2881 ttcatcacgc ccacgtagag tagtatcttt attaccttct aagtagcctt tacgcaccat
     2941 tgggtatttt actcgtgttt caccgtgtac ttggtctgct accacgtgtt gcaattcatt
     3001 tggcacagaa atctcaaaaa cagaatcaga tttcaccact ttgccatttt ctaccactac
     3061 acctaaaggc ccccagtggg cggcagttac tactgttttc atctcggctg ctttggcact
     3121 ggtggaagct aatgccccca ctacaccggt agtaccactg gctaaacctg caccggcagc
     3181 taagcttaat gatgaatttt ttagaaaacc gcgacgactt acgtcaatat tgtcttgttt
     3241 tttcataata aacctcgttt gaagttaagt taaaaataga cacctttcta aagtcgagtg
     3301 gataaaccat ttctcgtgta tccattggta aaagcaccga cggtaatttt tgcaaaatgt
     3361 taggaaaaaa tgaccgcttg tagtaggtgc tttacggctt gctaccatat ctctgctctc
     3421 agcagacact taggctcaca agctcggtat cctctaagtt gcaattaatg ggaactgcct
     3481 gctacatctt ttgcattacg ttggagatag atagtcaccg cacgcacatc atcagccgac
     3541 atagatgttc tgtctttcat tgaatttacc accccaatcc attgatttgc ggtgtaatgt
     3601 tctgccccaa tcggtgcatg gcaaccgcta cagtgtgttt ggtttaagtt atcgccaaaa
     3661 tgatttagtg cagtaatatt ggcagtgact gcatttttag gagcagtaat ttcaaaattg
     3721 atttctttcc aatttgagtt ggtgacatta tcaaacactg tttttgtgac attcactttg
     3781 ctttgagcgt catcaggtag aagagcaacc ataatacgct tgcctaaatc catatacacc
     3841 acagattccg caccttcttg ttgccagcca ttaaccgttg ctttaacctg ctcgccttct
     3901 gctgtccatt gatgtaattc tgcataaggt aacaagcgaa tttctccacc ttgagcgagc
     3961 tgcactggag tcattgcgag cgtataaagg gttttatcat ttgtgctaaa ttccgcaccg
     4021 tgtttagcta attcgcccat tgctgcggca ttatctaccg gcacatcagg cataaaatgg
     4081 gcaattcctt tatggcaatc aatacaggtt tgattagttt cttgggctag tttgtgcatt
     4141 ttctgtgccg cttctgtttg ttcagaaagt accatcgcat caaaactatg acagctttta
     4201 caggtcatag aatcgttttc tttcatttct gcccaaacac gttgtgccat ttctagacga
     4261 tgggcttcat aggcttcttg atcaggtaat ttattggtta caacggtgtg ccaaacatct
     4321 tttaatgcga tgattttagc tttgacataa tgcaagccgt cttgtggtag atggcaatcc
     4381 gaacactcgg ctcgaattcc cttacggttg gaaaaatgga cactgccttc ccactctgcc
     4441 tgtgggtgag tcatagaatg gcagctcaca caaaattctg ttgagctggt ggctttcatt
     4501 gcatattgtg tgccacctaa taccgcagca cctaatgcca taataccgac aaatacagca
     4561 atttttttca tcttagccat aaattacccc acttaataca ctaaaaatta aagacagagg
     4621 cattgtatta actcccaaga ggtataaaaa taagtaaaaa tacctattac ctcgaaagag
     4681 tgagaataat ttgatctaag gcaaaaatat gtagtgaaat tttaggcttt ttcagagaac
     4741 cacggcggta agataaattg tgcattggca aacaactccg gtgcaatcac acggctctgc
     4801 ccttgttgga tttggtaaac caactgtggc aagctgatag ataagtcgtg ggtttctgcg
     4861 taagttaatc caatttggct atcggtatta aaatagtaag tgccgtttac cccataatgt
     4921 ggctgtaagc ggatcgcatt ggagacggct ttaaaatgcc gtggtgaaac actctgtttc
     4981 cacgcatttg ccagaatatt cgcttggtca taagcaatac tggcttggga ataagtgggc
     5041 gatttgccga aaaaccgttc gtaatgttgg ctaaactgtc tgcctaaata attttcgctt
     5101 aacccactat tggtactcca aagaacgcct tcgcaaagtt tctcgtgtgg caaaaacgcc
     5161 gaaggtgcat aaatactgta aataatggca tttgttgggt tgcgaatgaa cgtttgataa
     5221 aactgtacaa tatcttctgc aaaataagag gcaaacacaa taatggaagg tgcgagatta
     5281 tgcacctgtg ccattaatgt ggcataatta tcttgctctt gggtgagttc cagataatcc
     5341 acattccagc cttgctcccg caaacttagg gttaaacttt caataccgat atcaactttt
     5401 tgccaactca ccgttaccac catcaccgtt ttattctgaa gccaaggggc ataatggtaa
     5461 cggtaatatt gcagaaagtg agatatacct aagccatagg ttacatcact ggcgcaaacc
     5521 tgaaacatat tttcaattcg ttgattcggt aaattttggg caagtttatt tgagccacta
     5581 tgggttgcaa tatgcaaata aggaatgcct ttagttgcaa ttaattcgtg tacttccggc
     5641 aagtagcagg cataagcggt ggaaatcgca tcaacttctt gatcaaataa atgatggtat
     5701 gcctgaagaa tacttgcttt atctttaaca taaaacccag ccgttgcaac ctgtacttct
     5761 ctgccgtgaa taccaccttg ttgattgatg gtctcaaccg caagttgagt gccgttaagt
     5821 agctctcggg tatcgatttg cccaataccc tgttcaacat aaggcacgcc aataataatc
     5881 ggacgactat gatggtggtt tatcgtaaaa atcggtggtt cgtgtcgagt tgaagccgtt
     5941 acaagcggtt gttttttcgc gataatttgc aatgccagtt gttcaatgtt aaagctggca
     6001 agaatggatt gggttagttt tcccggtgtg ggtaaacaga ttaaatgttc ggtaatggca
     6061 aaaacagcta ataaggttcg gcttttggta tgtgttttcg caaaaatatt ttcgatatgt
     6121 ttatcaacag tccgtttgct gatacaaagc tcattggcga tatcctcatt gctcaaacca
     6181 ctgctaatta gagtgagaag ctcaatctcc cttttactca gtccataagg caaatcggta
     6241 tgctctgctt gagtcaatac aaacgattgg tggcgttcta ggctgatctt aagccattga
     6301 tggtttgaac tatagtaaaa ctgcaagcta tttttatctg aatagagcaa tgcctgtgca
     6361 tagtggcaaa tttgcggtaa ttcagcaaaa tagtctgccc ctgctttgtc ttcccattct
     6421 gatatttcgc cttgttcatt tactaaacaa gaccatcggc tacgtttatc cattctcacc
     6481 tcgaactaaa aacgttagct aaaatagcaa aattatctcg gcattaatat gatataaatc
     6541 aaactaagca acggttgcca gatttttata ggtagagcat acaatttaaa ttatacctct
     6601 tgcctaatta ggtttctcac cataaaatga aaaccaattt attgaagact ccgagcatta
     6661 tttcctaact ctaaaaatta aagacaaatt tttgatatgg aatttatgcc agtaacagca
     6721 taaagctgtt caaaggataa cttagaaatg ggttgtcctc tcgtgtttag aaaggtgtca
     6781 aatgcagtct attatcccaa ttaaaaacgt gggtgatgat gtcgtttcag gtttagttga
     6841 tcgctttcag cgtcaatata cttatttgcg actatccatt actgatgttt gtaacttccg
     6901 ttgtaattat tgcttgcctg atggctataa gccgccttca cataagcaaa cttttcttag
     6961 cgttgatgaa atccagcggg tggctaaagc ctttgccaat ttagggacgg aaaaaatccg
     7021 tatcaccggt ggtgagccaa ctttacgcaa agatttcctc gaaatcgctc acactatttc
     7081 acaaacaccc ggtatccgta aagttgccct aaccaccaac ggctatcgcc tagagcgtga
     7141 tgttgaactg tggcaacaag ccggtattac cgatattaat gtgagtgttg atagccttga
     7201 cccacgccaa tttcaactga ttaccggcga gaacaagttg caatctattt taaagggtat
     7261 tgataaagcc tttgaaattg gctacccaaa aattaaagtc aatgcggtgc taatgaagca
     7321 atataccgcc cctgaattgg ataaattcct cacttggatc aaagacaagc cgattcaaat
     7381 gcggtttatt gagctgatgg aaaccggtga aatggatagt ttcttccaag ctcaacatct
     7441 ttctggtcaa tcggtgatga cccgcttatt acaagaaggc tggcaattac aacccaaagc
     7501 gatgtctgac ggcccggcaa aagtgctttc tcaccctgat tttaaaggcg aaatcggctt
     7561 aattatgccc tacgagaaaa atttctgtgc ctcttgcaac cgcttgcgtg tttccgcact
     7621 tggtaaactg catctttgct tatttggtga agaagggatt gatattcgtg atttactggc
     7681 aagcgatgag caacagttac agcttgaaac ccgcctaaaa tcttccttac aaggcaagcg
     7741 agaacaccac tatttgcata ttggggatag tggggttagg aataatttgg cgagtatcgg
     7801 tggttaaaca accaccgagc gtgttttttc tgttactttt ctttgcttcg ccaaagaaaa
     7861 gtaaccaaaa gaaaggcgac cccagatttt ccttaatcct tcgcttgttg ctaacttttg
     7921 ggacgaactt ttcaaactcg ccaactgcgt tggctcaaac acgaaaagtt gtcctcaaaa
     7981 gtttacgcaa tcgctacggc ggaaaatagg ggcaagcggt acattattta agatttttgc
     8041 aagtttttat ttaaaaataa ccgcttgtaa tgttccagct tctcccttct gaaccgcctg
     8101 agcgactttg aatttatagg aaaaatttag tgtttgagcc aacgaagttg gcgagtttta
     8161 aatttttccg ttaaacaaat tcaaataaaa tgaagatagc ggtgaagtag ggtgtgcttt
     8221 ctttggttac tttctttgca caagcaaaga aagtaacaag aagacgctca atattaattt
     8281 tacaatcaaa tttaaagaga caaacaaatg acaaccttca cccacatcaa ccaaaacggc
     8341 gaagccaata tggttgatgt ttcaatgaaa caagaaaccg tacgcattgc ccgagcggag
     8401 gcatttgtgc gaatgaatgc cgaaacatta caaatgatcg tcagtggtaa tcaccacaaa
     8461 ggcgatgtat tcgcaaccgc tcgaattgcc ggtattcagg cggcgaagag aacttgggag
     8521 ctgattccac tctgccaccc gttattgctt tctaaagtgg aagttcaact ggaggcgttg
     8581 ccggaaagca accaagtgcg aattgaatca ctctgtaaac taaccggcaa aaccggcgtg
     8641 gaaatggagg cattaaccgc agctagtgtt gctgctctga ctatttacga tatgtgtaaa
     8701 gccgtgcaaa aagatatgat tattgaaaat gtaagattac ttagtaaaag tggcggaaaa
     8761 tcaggagatt tcaaggttga ttaagatact ttttttcgcc caagtgcgtg aacttgtggc
     8821 aacggataga ctagatgttg agcctacttt taccactgcc gaagcgttgc gtgaacactt
     8881 aagccaacag ggtaaaaaat ggcaacttgc ccttgaaaaa ggcaaactgc tggttgcaat
     8941 taatcaaacg atctgcccgc ttgaaacgga gatcaaagac ggcgatgaag tggcattctt
     9001 cccaccggta accgggggct aaaatgtttg aaaccctgat tgaagtacaa gaagctgaat
     9061 ttgaccaaaa ccgcatttac caatggctca gtgaacaaca tagcgtgggg gcagccactc
     9121 tattcatcgg taaagtacgt gaaatgaatt tgggcgataa tgtttccggt ttgtttcttg
     9181 aacactatcc ggcaatgact aaaaaagcat tgcaagaaat tgtggctcaa gctcgcactc
     9241 gttgggattt acaacgcgtt gcggtgattc accgcattgg gcaactgcat accggtgatg
     9301 aaatcgtatt agtcggtgtg agttctgctc atcgaggtga tgcctaccac gccaacgagt
     9361 ttattatgga ttatctcaaa accaaagccc cattttggaa acgagaacaa acccaagccg
     9421 gtgaacgttg gattgaaggg cgtgagagtg accaacaagc cgccaaaaaa tggcaataga
     9481 aaaaatggca ataatttgca aaaggtaacg aatggaaaat ttatatattg atttgcagat
     9541 cgcctgcgaa aataccgaaa acttaccaag tgaacaacaa ttttatactt gggtacaaaa
     9601 agccctcgca gttgaggcaa aaaccgatga tttccctgag agtgagatca ccattcggat
     9661 tgtcgatgaa gcagaaagcc acgagctaaa tctgacttat cgtggtaaag acaagccaac
     9721 caatgtgcta tctttcccgt ttgaggcccc cgaaggaatc gaaatgccac tattgggtga
     9781 tttagtcatc tgtcgtcaag taatggaaaa agaggcggaa gaacaaggta tttcagccga
     9841 atcccattgg gctcatttgg cgattcacgg cacacttcat ctgctcggct acgaccatat
     9901 tgaggaagat gaagcagtgg aaatggaaag cctcgaaacc gaaattatgc aaagtttagg
     9961 gtatgaagat ccgtatcttt cagaaaaaat atagtcttgt aggggagggt cctgtgccct
    10021 ccagtactcc attataatcg gacaggcaca ggagctgttc ctacaagtta tatgagaacg
    10081 atcgcaatca taacatctcc taacaatgcc gactttattc aacaaggcta tttttacatt
    10141 cccgaaaatc atcagcttaa agctatcccc ttttccaatg ccaaaacgat tttaggacaa
    10201 gaataccctt ttgccattta tactatgcaa gcagaaaatg gggtgaattt taacttagat
    10261 gcttttgcaa tacttgccgg cactattcaa gaaaacggta ctttattttt gctttgtcct
    10321 cagtgggata atttggaaaa tgaattagat ttcgatgcgt tacgttggaa cgaaaatcag
    10381 gctattgcct gcccgaattt ctatcaacat tttaaacaat tagtcgctaa atttggtttt
    10441 gaagtcagaa ctaatttgcc aaaattaccg gctacaagcg gtcaaattcc ttcaaaaatt
    10501 taccaattaa cgcaagaaca gcaaaatatt ttgcaaaatc taccgcttga tcctgccgat
    10561 attcatttga ttaccgcccc tcgtgggcgg ggcaaatcta cccttgcagg gcgacttgca
    10621 aaagcgttac ccgcacaaaa taaggtatta attaccgcac ggtcttattc tgcattgccc
    10681 agtttttggc gttcggcaga gcaaaaaatc ccttttttcg cacctgacaa tttaatcgag
    10741 caagttaaaa gtaaaaacat ttcacctaac caatggctct ttattgatga ggcagctagc
    10801 ctacccttgc cgatactcca cacactttgt gcctattttg aaaaagtggt tttaaccaca
    10861 acaacccaaa attacgaagg cacggggcga ggatttgagc tgaaattccc ggtaatgttg
    10921 gataaaccgt ttaaacattg gacgttatct caaccattgc ggtggagcga aaatgatcct
    10981 ctcgaagcat ttgtgactga gttgctatta ctttccgaag aaaaatctcc cctctttagc
    11041 aaagagggga agggggagat ttattcgctt cgctcacact atgtgccgtt gctaaagcaa
    11101 cgttcaaacg caaagcgttt gtggcagaag caattatcga agaatataag ttattcgaat
    11161 aagcatttac aggaaaaaat cgctttctac cacttactcg ccaacgccca ttacaaaacc
    11221 actccaactg acttacgccg tttatttgat ggcgaaaatc agcttttgtt ttcacaacag
    11281 gaaaacgagc aacttatcgg cggaatttgg gcaatgcaag agggtggttt agatgaaaaa
    11341 ttaacccaag ccatttggct aggggaacgc cgtccgcaag gcagtctagt ggctcaatat
    11401 ctctgttttc aagggaattt accgcaggct tgcaaattgc attccattcg catttctcgg
    11461 attgcggtat tgcctgaaaa gcaaaatcaa ggcgttggca agcggttgat ttctcagttt
    11521 attttgcaaa attcggtaga aaaacgaccg cttgatttta tctctgtgag ctttgggcta
    11581 actactccac tccacgcatt ttggcaatct tgtggtttcc aacttgtgca aatcacaccg
    11641 aataaagagg caagcagtgg ttatcaaagt gcaatgatga tttacccgat ttcggagcaa
    11701 ggaaagttat ttgcacagca ggcaacccaa gcctttgcca gagatttcgc ccttcagcca
    11761 tttttcacgg aaatttgtga ggaattgcaa aatttcgaac aatttcgacc gcttgccaca
    11821 cacaatttag atgaacgtga ttggaaaaat ttaaccgcgt ttgctcatgg caagcggacg
    11881 ttttcagcgg cgtatgtgag tttaaaacgg ctttatttat cggataaagc acgcttttca
    11941 gagctggata tttttgaacg aaaagggcaa aaaatctcca aaatggaggt ggaaaattat
    12001 cgaaaactcg ttttgcaaaa cttaaacaat aaatcattta aaataattta taggttttat
    12061 tacatttttt tgtgtttttg ctcttgctaa atctgcaatt taatcgtata aattcactgt
    12121 ttatttttca ttttgatgag gaactccaat gtcaatgttt agtcacattc aagctgctcc
    12181 ggcagactca attttaggct taggtgaagc gtttaaagca gatagccgtg aaggtaaaat
    12241 caaccttggt atcggtgttt atatgaccga tgaaggcaaa accccgattg tcaaagcggt
    12301 aaaagaagca gaaaaacgtt tattagagac ggaaaacagt aaaaattatt taaccattga
    12361 cggtgttcaa gcattcaatg cggcaacgca agcgttatta tttggcgaag gggctgaagt
    12421 gattacctca ggtcgtgcta aaactgcaca gagtttaggt gggacagggg cattacgcat
    12481 tgcggcggaa tttatcaaac gtcatacgaa tgcgaaaaat gtatggattt caaccccgac
    12541 ttggccaaac cataacggca tttttgatgc agtaggcgtg aatgtaaaag gctatcgcta
    12601 ctacaataaa gagactaacg gtttagattg ggaaaattta attgccgatt taagccaagc
    12661 ggaagccgga gatgtggtgt tattgcacgg ttgctgccac aacccgaccg gaattgaccc
    12721 aacacctgca caatgggaac agttagcagc attatctgcc gaaaaaggct ggttgccgtt
    12781 atttgacttt gcttatcaag gctttgcaaa cggtttagag gaagatgctt acggtttacg
    12841 agcttttgtg aaaaataacc gtgaattgtt ggtcgcaagc tcattctcga aaaactttgg
    12901 gttatataac gagcgtgtcg gtgcatttac cctaattgca gataatgctg atgatgccaa
    12961 ccgtgctttc actcaaatca aatcgattat tcgtgtactt tactctaacc catctgctca
    13021 cggtgcaagt gcagtagcag ttgcattggc tgatcctgac cttaaagcac aatggattgc
    13081 ggaattagat gaaatgcgta accgtattaa agaaatgcgt agccaattag tgcagaaatt
    13141 aaaagaaaaa ggggcaaaca aagacttctc tttcattact gagcaaaatg gtatgttctc
    13201 attcagtggc ttaacaccgg agcaagtgga taagttaaaa gatgagtttg caatttatgc
    13261 tgtgcgttca ggcagaatca atgtagcagg cattaccagc aaaaacattg atgctcttgc
    13321 cgatgcgatt gtgaaagtgc tttaattaaa ccttaaagat atatagaggc ataagcctga
    13381 gtgcttgtgc ctctttttta tcttttaggt acaagtgtgg acacttgcac caacgttgat
    13441 tattcgtaga actaggtttc caaccaaagc ataaaatctg ctaccgtatg aaatgagccg
    13501 aacaccagca caatatcatt ttcgttggct gtttcaaaca atactcggct tgcctgtgcc
    13561 acattttcat agctacaagc ggttgaattt ggcaaaacgt ttaccaattt cgctaacacc
    13621 gcctcgcctg tttgtccacg ccaacaatct agccctgcac aatgccattc atcaataata
    13681 ttagctaatg gctcgacaat accggataaa tccttatctt ctaacgcact aaacaccgca
    13741 tagatttttt gatttggttg ctttaactcc cgcagtttgt cagctaaata acgtgctgcg
    13801 tgtgggttat gccctacatc aataattact tttgcagccg gtttaggttg agaaaaatga
    13861 gtaaaatcgg tatccgtcag ggtttgaaaa cgccctgtca tttgagcttc atttaaggct
    13921 tgtcgaataa tcttttcatc aatttcaaat ggcagttgca ttaatactgc taatgcggtg
    13981 ccggcgtttg gaatcggaat aagcgggatt ggtaaatcgg taaaggattt ttcttcagaa
    14041 taccaatgaa acagattatt cttaatttca aactgccagt ctttaccccg gtaaaaagcg
    14101 tgacaattta acgaatcagc aatctgttta atcgaatgag ggcaatcagg ctcgccgatg
    14161 acaaccggaa tattttcacg gaaaatgccg gctttctcac gcccgatgtc ttcacggtta
    14221 tcgcctaaaa atgcaacgtg gtcgatatca atcgagataa tcacggcaag gcttggatca
    14281 ataatattag tggcatctaa tcgcccacct aatccgactt ctaaaatcac aatatcgagc
    14341 tgattttgtt tgaatagctc aaatgcagac agcgtactaa actcaaaata agtgagtgaa
    14401 gcggtctttt ttgcattaat ttttgcaaat gcttggacgt ggtcggcatc aggtaatact
    14461 tcgccgttaa ttcgcacccg ttcattatag tgaattaagt gcggtgaaga gtaaacacca
    14521 acccgaaatc cggcttttaa taaggtaact tctaacaaac ggcaggtcga acccttgccg
    14581 ttagtaccgg caacggtaat cacataaggg gcaggcttga gtaaatccag ctctgttgcg
    14641 accttacgaa tacgatctaa gcccatatca atcggtttag aatgggcttg ttctaaatag
    14701 gaaagccacg tttccaaaga atccgtggct ttaggtatgc ttaatgtatt cattcagata
    14761 ttttattctg cgttttctac aaccaattcc gccactttaa acggcgttgg ttgattggtt
    14821 aattttgcac aaagacggga aagggtatca cgcatctctt tacgatgcac gatcatatca
    14881 actgccccgt gttctaataa gaactcggca cgttggaaac cttccggcag tttttcacgt
    14941 acggtttgct caattacacg aggaccagca aagccgatta gggcttttgg ctcagcaata
    15001 ttcacatcgc ccagcattgc caaacttgcg gaaaccccac ctaaagttgg gtcggttaat
    15061 acagaaataa acggtacgcc ctgctctttc attttggcta aaatcgcact ggtttttgcc
    15121 atttgcatta aagagaataa cgcctcttgc atacgagccc cgcccgatgc cgaaaaacag
    15181 ataaacggaa ttttttcagc taaagctttt tccgcagctt tcacaaattt tgcacctact
    15241 acagacccca ttgaaccgcc cataaactca aagttaaagg aggccgtaac caccggcata
    15301 ttatgcaatg taccggcaag cacgataaaa gaatctttct caccggtttg tttttgcgcg
    15361 gcagttaaac gatctttata tttctttaaa tctttaaatt tcaacacatc ttccggctct
    15421 aagtcggcag cgatttcgac cgcagaatct ttatctaaca aattcaataa acgggtgcgg
    15481 gcatcaatac gcatatgatg atcgcatttt ggacaaacct gttggttgcg ttgtaattct
    15541 tcgctataga gaacttgttc acaacttgtg cattttgtcc atacaccttc cggcactttt
    15601 gattttgcat tgcttgatga tgaagagtct ctacctaaaa ttctgtctaa ccagctcatt
    15661 attattcctt ttggattgag ttgttgggtt cactaaatgg ttgctattaa agcataattt
    15721 atcggttttt gatatgtttt cttgacatat cagatcacta actatgtgta taagttcgat
    15781 aaaaaaacgc aatcagaaga atgattaaca tcaccacaat ttgaattaag cgttttttgg
    15841 ttaatttttc cgctgccatt gctctgctca tacttaataa atttccgcat tataagcgaa
    15901 aaagcacggg ctatgtagaa tttgcaaaat tttgatcaaa aataaccgct tgtaaaaagg
    15961 aaatactatg gcaaccattg aacaatttct tgaggttgta aaccaacttc gtcaccctga
    16021 acacggctgc ccgtgggatc tcaaacagaa ttttgacacg atgttcccca cttattggaa
    16081 gaaacctacg aagtagcgga agcgattcac acccaagatc gcactgcctt gcgtgaagag
    16141 ttaggcgatt tattactgca agtggtattt ttaagccaat tagcgaaaga ggaaggcagt
    16201 ttcacttttg atgatgtagt aacggatatt cacgataaac tgatttaccg ccaccctcac
    16261 gtttttggtg atgtgaaagc tactaacagc gaagaggcct tacaaagttg ggaagcacaa
    16321 aaagcgaatg atgcaaaaca ccgtagccaa gattctattt ttagatgatt taccttttgc
    16381 tttgcctgct cttacccgtg caaataagct acaaaaacgg tgtgcaaaag ttggattcga
    16441 ttgggataac cctcacgatg tgctggcaaa agtcgaagaa gaactcgatg aagtcaaagc
    16501 agaaatcgca caatatccgg ctcgctccat cgagcttgct gaagaattag gcgatctctt
    16561 gtttgcgatt gtaaatttat gccgccatta tcataccgat gccgaggaaa ttttacgcaa
    16621 tgcaaatcta aaatttgaac atcgctttcg aaaagttgaa aaatctgtga aaaaatcggg
    16681 aagaactgta aaagaatgta aattagaaga actagatgta atttggcaca aaataaaagt
    16741 ggtaaaata
//
LOCUS       DANLXD010000055        16612 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.055, whole genome shotgun sequence.
ACCESSION   DANLXD010000055 DANLXD010000000
VERSION     DANLXD010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16612
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.055"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(200..715)
                     /locus_tag="PXD18_001484"
     CDS             complement(200..715)
                     /locus_tag="PXD18_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000168322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL6301914.1"
                     /translation="MAGINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNT
                     GARREVTEWHRIVFYRRQAEVCGQYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEIQG
                     DVLQMLGSRQGNDMGGQQGGWGNSAPAGNSYNQGNSNYGYNQTQSAAPQSKPAPQPEP
                     AMNNFDDDIPF"
     gene            870..3698
                     /gene="uvrA"
                     /locus_tag="PXD18_001485"
     CDS             870..3698
                     /gene="uvrA"
                     /locus_tag="PXD18_001485"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDL6301915.1"
                     /translation="MQHIDIRGARTHNLKNINLTLPRDKFIVITGLSGSGKSSLAFDT
                     LYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTVT
                     EIHDYLRLLFARVGEPRCPDHDVPLAAQTISQMVDRVLEEPEGKRLMLLAPVVKERKG
                     EHVKLLENLTASGYLRARIDGEICDLSDPPALELQKKHTIEVVVDRFKVRADLATRLA
                     ESFETALDLSGSTAIIADMDDPNAEEIVFSSSFACPHCGYSLHELEPRLFSFNNPAGA
                     CPTCDGLGVEQFFDAKKVVQNEEVSLAAGAIKGWDRRSFYYFGLLKAVAEHYGFDLET
                     PFGQLPKKYQNIILNGTKEEIEFVYVNDRGDKVKRKHAFEGVLNNMARRYKETESNSV
                     REELAKYINNRPCMDCEGSRLRREARYVFLDKTNLPMVSEKSIGEALTFFEELKLAGQ
                     KEKIAEKILKEIRERLQFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVM
                     YVLDEPSIGLHQRDNERLLNTLVHLRNLGNTVIVVEHDEDAIRAADHIVDIGPGAGVH
                     GGQVIAQGTAAEIMQIEESITGQFLSGKQKIEIPAQRVPYEPTKLLTLSGASGNNLKK
                     VKLEIPVGLFTCITGVSGSGKSTLVNDTLFPLAQNALNRAENSDVAPYESIDGLSHFD
                     KVIDIDQSPIGRTPRSNPATYTGLFTPIREIFAGTQEARARGYNVGRFSFNVRGGRCE
                     ACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYKGKTIHQVLEMTVEEAREF
                     FAPMPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTGKTLYILD
                     EPTTGLHFADIKQLLGVLHRLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI
                     IATGTPEEVAKDKRSHTARFLKEILAKG"
     gene            complement(3790..5523)
                     /gene="dauA"
                     /locus_tag="PXD18_001486"
     CDS             complement(3790..5523)
                     /gene="dauA"
                     /locus_tag="PXD18_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylic acid transporter DauA"
                     /protein_id="HDL6301916.1"
                     /translation="MLNKWFLTKNAFLAVKPFSALKDALNAGYGKQHLIRDIISGLTV
                     GVIAIPLSMALAIASGVPPQHGLYTAIVAGIVIALTGGSRFNISGPTAAFVVILYPVT
                     QQFGLSGLLMATMLSGGILVLMALLRLGRLIEYIPLPVTLGFTCGIGIVIATLQIKDF
                     LGLSIEKMPEHYLGKLEAIFSALPTINWADTLVGVVTLLVLTRWHKLRLPIPGHLPAV
                     FIGTLLSLLLIHFGQNVATIGSAFHYTLSDGTTGYGIPSVLPEFVLPWNLPNAEGNRI
                     DWNLTTIQALLPAAFSMAMLGAIESLLCAVVCDNMTDTKHHSNNELLAQGLGNIASPF
                     LGGITATAAIARSAANVRSGAVSPISSVVHALLVLFALLFLAKALSYLPLSSMAALLL
                     VVAWNMADIPQIIQLTRRSGKNEIAVLLTCITLTVLFDMVIAITVGVLLASLLFIRTI
                     AEMTKSFEMAHPTDLNDVLVYRISGPLFFAAADNLFADLHNKTVHTDHQIKHIVLQCD
                     AVTVLDAGGIHALTRFVQHMLPHQQLHLCNVQFQPMRMLVRSQKTVNEIPQIQFSSDL
                     ESAFDKIRQAN"
     gene            5765..6697
                     /locus_tag="PXD18_001487"
     CDS             5765..6697
                     /locus_tag="PXD18_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6301917.1"
                     /translation="MDSLIHFLSAFLTNITWIGALELGLIYSLVALGVLISYKILDFP
                     DLTADGSFPLGGAVCVISILNQVDPWLATLYGTLAGAVAGMVTASLHIGFKIEKLLAS
                     ILMMIALYSINLRIMGMPNIAILGETTIYDVMPIESDLQLALVRLVMALLVVIIVKGL
                     FDLFFATEIGLAVRATGTNSRMAKAQGIAINKMTILGMAISNALIALGGALYVQSNGG
                     VDISIGVGTIVIGLAAVIIGEAIFSVKRIIWLTFAVIIGSILYRFFIALALNNETLNG
                     IGFGPQDLNLITALLVVIVLAVPRIKHKLLGKRG"
     gene            6699..7496
                     /locus_tag="PXD18_001488"
     CDS             6699..7496
                     /locus_tag="PXD18_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6301918.1"
                     /translation="MIELNNLFITFNKGTAIENPVLRGLSLKVEQGEFVSVIGSNGAG
                     KSTLLNAISGDCAVDSGEILIQGNKVNQSTTWQRANQVARVFQDPMAGTCESLTIEEN
                     MALAYQRGRKRGLGFAIKRQMRELFKDKLALLGLGLENRLTDQMGRLSGGQRQAVSLL
                     MASLQPSNILLLDEHTAALDPKTTDFVLELTNKIVREQKLTTLMVTHSMRQALDYGDR
                     TVMLHQGQVAFDVSGEQRQKMDVPDLLQLFQQSRHEQLSDDGLLLGN"
     gene            7583..7804
                     /locus_tag="PXD18_001489"
     CDS             7583..7804
                     /locus_tag="PXD18_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301919.1"
                     /translation="MLSIFKTPVEKETLDDWAKISVDVAKVAILAIPVILFGKEPTLI
                     KLTNLALLVLSIYVFLTLGRKLRQLKEVL"
     gene            7987..9912
                     /locus_tag="PXD18_001490"
     CDS             7987..9912
                     /locus_tag="PXD18_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HDL6301920.1"
                     /translation="MTKYDDKIQHAFSENGLLSQNISGFRPRQAQLEMAQVVAKAVKF
                     ATPVVVEAGTGTGKTFAYLVPALLSGKKTILSTGSKNLQDQLFNRDLPTIQKALKYKG
                     KIALLKGRANYLCLERLDQVTAMGVLGDKSVLTDLKKVSKWQNATKTGDLSECITIAE
                     DSPILPQLVSTTESCLGSDCPHFKDCYVVQARRKAMEADVVVVNHHLFCADMAVKKTG
                     FGELIPEAELVIFDEAHQLPDIASQYFGQSLSSRQLFDICKDTNIVYRTELKDLSQLG
                     KAADHLTKVVQDFRLLMGGEGQIRGNLRELFRDKKVVDGLVKVAENIDFLSEVAKKSL
                     GRSETLDKIFERLAEVKVQLKKLMDTSVTGYCYWYEANGRSFGLHITPLMVADKFGEQ
                     LKNQQIGWVFTSATLEVGGKFDHFCQRLGIENAEQLVLQSPFDYQHQSLLCVPRYLPD
                     TNKSNTLTALGQLLKPVIEANKGRCFLLCTSYYMMRGLADFLREHSSLNVLLQGETSK
                     SRLLEKFVKEDHSVLVATQSFWEGIDVRGDDLSLVIIDKLPFTSPDEPLLKARMEDCK
                     IQGGDPFNDIQIPEAVITLKQGVGRLIRDVTDRGVVIICDSRLVMRNYGQTFLKSLPP
                     SRRTRDLGNVIQFLKQK"
     gene            9986..10351
                     /locus_tag="PXD18_001491"
     CDS             9986..10351
                     /locus_tag="PXD18_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HDL6301921.1"
                     /translation="MLSTLLRMVASLALLFVMLYLGKLIVYLFPIGIPDSILGMLILF
                     GCLVIGIVKVEWVIPSAKPLTRYITLFFLPICVELIEHLELLRQNLNTFVLATALSTL
                     VSVVAIGVFAQWIFHYKRG"
     gene            10353..11039
                     /locus_tag="PXD18_001492"
     CDS             10353..11039
                     /locus_tag="PXD18_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HDL6301922.1"
                     /translation="MSYLYTVLTVIMFIAGLKISQKLKSSFLNPFLIALALLIGVLLI
                     FNIPYQDYYQGNSPLNNLLGVSVVALAYPFYEQLPHIRKKWRQIVVILLFSTIITMIT
                     GLGFSLLFGASQEILAAILPKSVSMPMAIIITNEINGNVAIAAVGVMIAGLVGSILGF
                     TLLRLAKVRNVMVIGLSMGAASHALGTARCLEHSMKAGSYSSIALVACGVLSSIFAPL
                     IFNVIVTLCY"
     gene            11123..12886
                     /gene="msbA"
                     /locus_tag="PXD18_001493"
     CDS             11123..12886
                     /gene="msbA"
                     /locus_tag="PXD18_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A ABC transporter ATP-binding
                     protein/permease MsbA"
                     /protein_id="HDL6301923.1"
                     /translation="MQEQITQEKDLSTLKTFKRLWPTISPFKAGLITGAVALVLNALV
                     DSSLIYLLKPLLDEGFGQANNDFLKLMAVLVVVFILVRGITNYIASYCLAWVSGKVVM
                     TLRRHIFQHLMYMPVSYFDNNPTGRLLSRVTYDTEMVASSASHSLVTIVREGAYLLSL
                     FVVMIYTSWQLSIVLFVMAPIIGVLISFVSKYFRQLSRNIQSSMGELTVTTEQMLKGH
                     KVVLSFGGQEIEKARFDRVSNDMRRKGMKVVSADGISDGVVQLIASFALSAVLYVATF
                     PEVMSENLTAGSFTVVFSSMMAMLRPLKSLTNVNSQFQRGMAACQTLFEFLDLKTEKD
                     HGLISVAKAEGNVEFKKVSFSYEGKEEKALDNISFTIPKGKTVALVGRSGSGKSTIAN
                     LLTRFYDVTDGQILLDGINIQDYRLKNLREQCSVVSQQVHLFNDTIANNIAYAAIDKY
                     SREEIIAAAKAAHAMEFIEKLENGLDTVIGENGASLSGGQRQRLAIARALLRNSPVLV
                     LDEATSALDTESERAIQSALEVLQKDRTVLVIAHRLSTIEKADEILVVDHGNIIERGS
                     HTELLAQGGAYKQLHSLQFGA"
     gene            12975..13607
                     /gene="lolB"
                     /locus_tag="PXD18_001494"
     CDS             12975..13607
                     /gene="lolB"
                     /locus_tag="PXD18_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein localization protein LolB"
                     /protein_id="HDL6301924.1"
                     /translation="MKKLTKLLSLSALLVLTACNSVLNASTEVQQPTVQIPHDDPQWQ
                     QHLAKLSQIQGYTATGQFGYISPEERFSSHFNWRYTNPIQFGLELSSNLSTKSLKLER
                     NKRGLTVSDNEGNSRSDRDVDALMQEIIGVSFPIDQFAYWVKGLPEKDGNYIVNEKRQ
                     LSQFSYPLNGTLWKASYVEYHEDRVPNLPKLIVLENGTQTLKIRIEKWAY"
     gene            13595..14449
                     /gene="ispE"
                     /locus_tag="PXD18_001495"
     CDS             13595..14449
                     /gene="ispE"
                     /locus_tag="PXD18_001495"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HDL6301925.1"
                     /translation="MGVLMKKVTLPSPAKLNLFLYITNKRADGYHELQTLFQFLDFGD
                     EIEIEITESSEVELINPVEGVATEENLIYRAAKLLQKTTACRQGCRIGIKKNLPMGGG
                     VGGGSSNAATVLVGLNHLWNTELSLEKLAELGLSLGADVPIFVRGMAAFAEGVGEVLT
                     PCDPQEKWYVVLKPEVSISTAAVFTDPNLPRNTPKRPLAELLSLPWENDCEKVVREKY
                     SAVEDLIQELLQYAQFRLTGTGACIFAEFETKAEAEQVFAHKPEAVFGFVAKGQNISP
                     LHQMLFQI"
     gene            14475..15425
                     /locus_tag="PXD18_001496"
     CDS             14475..15425
                     /locus_tag="PXD18_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HDL6301926.1"
                     /translation="MTDIKLFAGNATPELANRIAKHLYTSLGNATVGRFSDGEIQVQI
                     NENVRGGDIFIVQSTCAPTNDNLMELIVMVDALRRASAGRITAVIPYFGYARQDRRVR
                     SARVPITAKVIADFLSSVGVDRVLTCDLHAEQIQGFFDVPVDNVFGSPVLIDDILKKS
                     DLVNPIVVSPDIGGVVRARAVAKLLNDTDMAIIDKRRPKANVSQVMHIIGDVADRDCI
                     LVDDMIDTGGTLVKAAEALKERGARRVFAYATHAVFSGTAAQNLANPALDEIVVTDTI
                     PLSNEIKALNKVRVLTLSGMLAEAIRRISNEESISAMFDA"
     gene            15503..16513
                     /gene="pyrD"
                     /locus_tag="PXD18_001497"
     CDS             15503..16513
                     /gene="pyrD"
                     /locus_tag="PXD18_001497"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HDL6301927.1"
                     /translation="MYSLIRKLLFALDTEKAHQFSIQALALAGKSPFSILPTPDNPTQ
                     VMGLTFKNPIGLAAGADKNGEAIDGFGKLGFGFIEVGTITPLAQDGNPKPRQFRIVDA
                     EGIINRNGFNNKGVDVLVENVKNATYSGILGINIGKNAVTPIEHSFDDYQICLRKVYQ
                     YADYVAVNISSPNTKNLRSLQYGEALDDLLRNLKNEQAQLSQKMGKYRPLVLKIAPDL
                     TDEEIVSVADSLIRYQIDGVIAGNTTLSRESIAGLPYSEQLGGLSGKPLHSLSTRLIS
                     KLSAELGERIPIIGCGGVHSLESGQEKVNAGASLLQVYSAMIYQGPSLIQTLAKHLQL
                     NS"
BASE COUNT         4791 a         3131 c         3837 g         4853 t
ORIGIN      
        1 ataataaatc tgtcaataag ttacttatta atcgaatgaa aagtggattt attaattata
       61 ttaattaata gggaacactt attacttgga agtgttccct attattttga gtaaggtagg
      121 ggcgctttat atgagtagct ttttatttca tcgaaatgcg gtgtatggaa cccatgagct
      181 acttaagtca atactttgat tagaacggaa tatcatcatc aaaattgttc attgccggct
      241 caggctgtgg tgccggttta gattgcggtg cagcactttg ggtttggttg taaccataat
      301 tgctgttgcc ttgattgtag ctattacccg caggagcaga atttccccaa ccgccttgct
      361 gaccgcccat atcattacct tgacggctgc cgagcatttg tagcacatcg ccttgaattt
      421 cggtggtgta acgatcttgc ccgttttggt cttgccattt acgggttttt aaacgtcctt
      481 ctacgtaaac ttgagagcct ttacgtaaat attgcccgca tacttctgct tgacggcggt
      541 agaatacaat acgatgccac tcggttactt cacggcgtgc accggtgttt ttatccgtcc
      601 agctttctga ggttgccaca ctaatatttg caaccgcttc gccatttggc attgtacgca
      661 tttcagggtc gttacctaaa ttaccgacaa taattacttt attgatacca gccataaaat
      721 cctctgtttg ataaattaaa ctaaaatttg ctaagtattc tacctgaaaa tccaaaagat
      781 gaacaccaaa aaactgatat tttgtacagt tttattaaaa tatgcgataa tgatcgaaaa
      841 ttgagaaaat agcactggac attaaaaata tgcaacatat cgatattcgt ggagcaagaa
      901 cacacaactt aaaaaacatc aatttaacct tgccgagaga taaattcatt gtaattaccg
      961 ggctttccgg ctcgggcaaa tcgtctctgg cgtttgatac gctctatgcg gaaggacaac
     1021 gccgttatgt agaatcactg tctgcatacg cccgccagtt tctctcctta atggaaaagc
     1081 ctgatgtgga tcatattgaa gggctttccc ctgcgatttc gattgagcaa aaatcaacct
     1141 ctcacaaccc acgttcgacc gtaggaacgg taacggaaat tcacgactat ttacgtttat
     1201 tgtttgctcg agtgggcgag cctcgttgcc ctgaccacga tgtgccattg gctgctcaaa
     1261 ctatttcgca gatggtggat cgagtattgg aagaaccgga aggaaaacgg ttgatgctac
     1321 ttgcccctgt ggtgaaagag cgtaaaggcg aacacgtaaa attattggaa aatttgaccg
     1381 ctagtggcta tttgcgggct agaattgacg gtgaaatttg cgatttatcc gacccaccgg
     1441 cattagaatt acagaaaaaa cacaccattg aagtggtggt ggatcgcttt aaagtaaggg
     1501 ctgatctagc cacccgtttg gcggaatctt ttgaaacagc gttagattta tccggctcta
     1561 ccgcaattat tgcagatatg gacgacccaa atgccgaaga aattgtgttt tcgtccagct
     1621 ttgcttgtcc gcattgtggt tactctttac acgaattaga accacgcctt ttctcgttta
     1681 acaacccggc aggtgcttgc ccgacttgtg atggtttggg cgttgagcag ttttttgatg
     1741 ccaaaaaagt agtgcaaaat gaagaggttt cattagccgc cggtgcgatc aaaggctggg
     1801 atcgccgcag tttctactat tttggcttat taaaagccgt tgccgagcat tatggctttg
     1861 atttagaaac cccattcggg cagctaccga aaaaatatca aaacattatt ttaaacggca
     1921 ctaaagaaga gattgagttt gtttatgtca atgaccgagg cgataaggtc aaacgtaaac
     1981 acgcttttga aggggtgctg aataatatgg ctcgccgcta taaagaaacc gaatcaaact
     2041 cggtgcgtga agagttggcg aagtatatta ataatcgtcc ttgtatggat tgcgaaggct
     2101 cacggttacg ccgtgaagcc cgttatgtat tcttagataa aaccaatttg ccgatggttt
     2161 cggaaaaaag tatcggcgag gcattaacct tttttgaaga gctgaaatta gccggtcaga
     2221 aagaaaaaat tgctgagaaa atcctcaaag aaattcgtga acggctacag tttttagtga
     2281 atgtcggctt gaattatctt tctctttccc gctcggcaga aaccctttca ggtggcgagg
     2341 ctcagcggat tcgccttgcc agccaaattg gtgcgggttt agtaggggta atgtatgtgc
     2401 tggatgagcc ttccatcggc ttgcaccaac gagacaatga acgcctactg aatactttgg
     2461 tgcatttacg caatttaggc aataccgtga ttgtggttga acacgatgaa gatgcgatcc
     2521 gagccgcaga tcatatcgtg gatataggcc cgggtgccgg tgtacacggt gggcaagtta
     2581 tcgcacaagg tacggcagct gaaattatgc aaattgagga atctattacc ggacaattcc
     2641 tctcaggcaa gcaaaaaatt gagattccgg ctcagcgtgt gccttatgag ccaactaaat
     2701 tgctcacctt atcgggagca agtggtaaca acttgaaaaa agtgaaatta gagattccgg
     2761 ttggtttatt tacttgtatc acgggtgtat caggttcggg caaatcaact ttagttaatg
     2821 acacactatt ccctctggca cagaatgcgt taaaccgagc ggaaaacagc gatgttgctc
     2881 cttatgaatc gattgacggc ttatcgcatt ttgacaaggt aattgatatt gaccaaagcc
     2941 cgattgggag aactcctcgc tcaaatccgg caacttacac cggattattt acgccaattc
     3001 gtgagatttt tgccggcacg caagaagctc gagccagagg gtataacgta gggcggttta
     3061 gctttaatgt gcggggcgga cgttgcgaag cctgtcaagg tgacggcgtg attaaagttg
     3121 aaatgcactt cttgcctgat gtgtatgtgc cttgcgatca ctgtaaaggc aaacgctata
     3181 accgtgaaac cttggaaatt cgctataaag gcaaaactat tcaccaagtg ttagagatga
     3241 cggtggaaga ggcgagagaa ttttttgccc ctatgccgat gattgcccgc aagttgcaaa
     3301 ccttgatgga cgtggggtta tcttatatcc gtttagggca atcttctact acgctctcag
     3361 gcggtgaagc ccaacgggtg aaattggcga ccgagctttc caaacgagac accggcaaaa
     3421 cgctctatat tttagatgaa ccgaccaccg gcttgcattt tgccgatatt aaacagttac
     3481 tcggcgtgct acatcgcctg cgtgatcaag gcaatacgat tgtggtgatc gaacataatt
     3541 tagatgtgat taaaaccgca gactggattg tcgatcttgg ccctgaaggt ggcagtggcg
     3601 gcggtgaaat tattgctacc ggcacaccgg aagaagtggc aaaagacaaa cgttctcaca
     3661 ccgcacgctt cttaaaagag attttggcta aaggctaacg ttcaacacaa gcggtcatat
     3721 tttcggaaaa tgttgcaatt tgcaaaaagt tggaaaatat gaccgcttgt tttatatccg
     3781 gagttattcc tagttagcct gtctgatttt gtcgaaggca gattcaagat cgctactgaa
     3841 ttgaatttgc gggatttcgt ttaccgtttt ttgtgagcgg actagcattc tcatcggctg
     3901 aaattgcaca ttacagagat gaagttgttg atgtggcaac atatgctgta caaagcgggt
     3961 tagggcgtga atgccaccag catctaatac tgtaacggca tcgcattgca gcacaatatg
     4021 tttaatttgg tgatcggtat gtacggtttt attgtgcaga tcggcaaaga gattatcggc
     4081 ggcagcaaaa aataacggac cgctgatccg ataaaccaac acatcgttca aatcggttgg
     4141 gtgagccatt tcaaaggatt tagtcatttc tgcaatagta cggataaata gcaggcttgc
     4201 cagtaacacc cctaccgtaa tggcaattac catatcaaat aataccgtga gggtaatgca
     4261 agtcagtaaa accgcaattt catttttacc tgaacggcgg gtaagttgaa tgatttgtgg
     4321 aatatctgcc atattccaag ctactaccaa taatagtgca gccattgagg aaagaggcaa
     4381 ataggaaagt gctttagcca aaaagagtag ggcaaataaa accaacaagg cgtgaaccac
     4441 actagaaatg ggggaaactg ccccggaacg aacattggca gccgatctcg caatcgctgc
     4501 tgtggcggta attcccccta aaaatggcga ggcaatatta cctaagcctt gggctaatag
     4561 ttcgttgtta gagtggtgct tggtatctgt catattatcg cacactaccg cacataataa
     4621 cgattcgata gccccaagca ttgccattga aaaggcagcc ggtaataagg cttgaatggt
     4681 ggttaagttc caatctatcc gattcccctc tgcattcggg agattccaag gtaacacaaa
     4741 ttcaggtaat acgcttggga taccataccc agtggtgccg tcagagagcg tgtagtggaa
     4801 tgctgagccg atagtggcaa cgttttgtcc gaaatgaatc agcagtaatg ataacagcgt
     4861 gccgataaag acggcgggta aatgcccggg aataggcaac cgtagcttgt gccaacgagt
     4921 taaaaccaac aatgttacga cacccactaa ggtgtcagcc caatttatgg ttggcaatgc
     4981 tgaaaaaata gcctctagct tgccaagata gtgttcaggc attttttcaa tgcttaagcc
     5041 cagaaaatct ttgatttgca aggtggcgat cacaataccg atgccacagg taaaacccag
     5101 tgtgacaggt agaggaatgt attcaattaa gcgtcctaat cggagtaacg ccatcaatac
     5161 taaaattcct ccggaaagca ttgttgccat gagtaatcca cttaagccaa actgctgcgt
     5221 gacggggtat agaatcacca caaaagcggc tgttgggcct gaaatattaa atcttgaacc
     5281 gcctgttagg gcaatcacaa tcccggcaac aatcgccgta tataaaccgt gctgtggtgg
     5341 cacaccgctg gcaatcgcca acgccataga taacggaata gcaataacgc caacggttaa
     5401 gcctgaaata atatctctga ttaaatgttg tttaccataa cctgcattga gagcatcttt
     5461 taatgcacta aaaggcttga cggcaagaaa agcattttta gttaaaaacc atttatttaa
     5521 catagaatgt tcgagtgaag agaatgtttc gcttatttta ctgcaatgaa taaaattaaa
     5581 tttgagctaa cgcaagaaaa agcaggaaag acgaaatatg ttggagacaa gcggttgttt
     5641 taggcgaaaa atttgcaaat acaaataatt agctgatttt attttgaaaa tagcgtaaaa
     5701 tgccacttta atttgtacta ctatagtagt gcatttgtgt gatttcatta actataataa
     5761 acaaatggac agtcttattc attttttgag tgccttttta actaatatca cttggattgg
     5821 ggcgttagag ctggggttaa tttattccct tgttgccctt ggggtattaa tttcttataa
     5881 aattctggat tttccggatc tgaccgcaga cggcagtttc cctttaggag gggcggtgtg
     5941 tgtgatcagc attttgaatc aagttgatcc ttggctggca actttatacg gcacgcttgc
     6001 cggagcagta gccggtatgg ttactgcaag tttgcatatc ggctttaaaa tcgaaaaatt
     6061 gcttgccagt attttaatga tgatcgcact ctattcgatt aatctacgca ttatgggaat
     6121 gccgaatatt gctattttag gcgaaaccac gatttacgat gtaatgccga ttgaaagcga
     6181 tctacagtta gccttagtac gattagtgat ggcattgctg gttgttatta tcgtaaaagg
     6241 tttgtttgac ctcttttttg cgaccgaaat cggtttggct gtgcgggcaa ccggtactaa
     6301 tagtcgaatg gcgaaagcac agggtattgc gattaataaa atgacgattt tagggatggc
     6361 gatttctaat gcgttaattg ccttaggtgg tgctttgtat gtgcaaagca acggtggtgt
     6421 agatatttcg attggggtag gaactatcgt gattggcttg gcggcggtaa ttatcgggga
     6481 agcaattttt tcggtaaaac ggattatttg gcttaccttt gcggtgatta ttggctcaat
     6541 tctttatcgt ttcttcatcg cactagcatt aaataacgaa actttaaacg gcattggctt
     6601 tggcccgcaa gatctgaatt taattacggc gttattggtg gtgattgtat tagcggttcc
     6661 tcgaattaaa cacaaattgc tcggtaagcg aggttaatat gattgaactc aataacttat
     6721 ttattacctt caacaaaggg acagcaattg agaaccctgt gctgagaggc ttatccctaa
     6781 aagttgagca aggcgaattt gtgtcggtaa ttggtagcaa tggggcgggt aaatctacct
     6841 tattaaatgc gatcagtggt gattgtgcgg tggactccgg tgagatttta attcaaggaa
     6901 ataaggtaaa ccaatccacc acttggcaac gggcaaatca agtcgcccga gttttccaag
     6961 acccgatggc tggcacttgt gaaagtttaa cgattgaaga aaatatggca ctggcttacc
     7021 aacgtggacg taaacgtggg ttgggctttg cgatcaaacg ccaaatgcga gagttattca
     7081 aagacaaact tgctttgtta gggctaggtt tggaaaatcg gcttactgat caaatggggc
     7141 gtttatcagg cgggcaacgc caagcggtga gcttgctgat ggcatcactt cagccgtcta
     7201 atatcttatt gttagatgaa cacaccgcgg cactggatcc gaaaaccacc gattttgtgc
     7261 ttgaacttac caataaaatt gtaagagaac agaaattaac cacgctaatg gtaacgcatt
     7321 caatgcggca agcccttgac tatggcgata gaaccgtgat gttacaccaa gggcaagtgg
     7381 cgtttgatgt ttcgggcgag caacggcaaa aaatggacgt gccggatctg ttacaacttt
     7441 tccaacaaag tcgccacgag cagttgagtg acgatggatt attactcggc aattaatttt
     7501 gcgatctgca tcgaaaaaat gaatttctcc ttttgttttt ggctgtcaaa ttttaaataa
     7561 taagcccaaa aggaggtatt caatgttaag cattttcaaa acaccggtag agaaagaaac
     7621 gctagacgat tgggctaaaa tttcggttga tgtagcgaaa gttgcgattt tggcaattcc
     7681 tgttatactt tttggcaaag aaccaacgtt gattaaattg actaacttag cattattggt
     7741 attgagtatt tatgtttttt tgacgcttgg gcgaaaatta cggcagctaa aggaggtgtt
     7801 gtgatggaac taggctggaa tttaaccata ggtttgctaa ttttaaacgt ctttgcgttt
     7861 gcttggcttt atattattaa ccggatttct aaagaacaat tatccaaaaa tcaataatat
     7921 ttaatttttc acaagcggtt gtttttgcaa aatattttgt aaattcgacc gcttgcctgt
     7981 ttttaaatga caaaatacga cgataaaatt cagcatgcat ttagcgaaaa tgggttgctc
     8041 agccaaaata tcagtggatt tcgaccacgc caagcacagc ttgaaatggc tcaagtggtc
     8101 gcaaaagcag taaaatttgc gacacctgtt gtggtagagg cgggaaccgg cacaggcaaa
     8161 acctttgctt atcttgtgcc ggcactactt tcaggcaaga aaactattct ttcgacaggt
     8221 tctaaaaacc tgcaagatca actttttaat cgagatcttc ccactattca aaaagccctg
     8281 aaatacaaag gcaaaattgc gttactcaaa gggcgtgcga actatttgtg tttagagcgt
     8341 ttagatcaag tgaccgcaat gggcgtactt ggggataaat ccgttcttac cgatttaaaa
     8401 aaagtcagta aatggcaaaa tgccactaaa acaggggatt taagtgaatg tattaccatt
     8461 gccgaagata gcccgattct accgcagtta gttagcacca ccgagagttg cttaggctcg
     8521 gactgcccgc attttaaaga ttgttatgtg gtacaagccc gccgtaaagc gatggaggca
     8581 gacgtagtgg tggtaaacca tcacctattc tgtgctgata tggcagtaaa aaagaccggt
     8641 tttggtgagt tgatccctga agctgagctg gtgatctttg atgaagctca ccaactgccg
     8701 gatattgcca gccaatattt tgggcaatcg ctttcttccc gccagttatt tgatatttgt
     8761 aaggatacca atattgttta ccgcactgaa ctcaaagatc tgtctcaatt aggcaaagcg
     8821 gctgatcact tgacgaaagt agtgcaagat ttccgattat tgatgggcgg agaagggcag
     8881 attcgaggca atttgcgaga gttatttcgt gataaaaaag tggtcgatgg cttggtaaaa
     8941 gtggctgaaa atattgattt tttaagtgaa gtggcgaaaa aatcgctggg gcggtcggaa
     9001 acgttggata aaattttcga gcggttagca gaagttaagg ttcaacttaa aaaattaatg
     9061 gatactagtg tgacaggcta ttgttactgg tatgaggcga atggacgatc ctttgggctg
     9121 catattacgc cgcttatggt ggcagataaa tttggtgaac agttgaagaa ccagcaaatt
     9181 ggttgggtgt ttacctcagc cacactcgaa gttgggggca aattcgatca tttttgtcaa
     9241 cggctgggca tcgaaaatgc ggagcagttg gtgttacaaa gtccgtttga ttaccaacat
     9301 caatctttac tctgtgtgcc ccgctacttg ccggatacca ataaatccaa tactttaact
     9361 gctctcgggc aattattaaa accggtgatt gaggcgaata aagggcgttg tttcttgctt
     9421 tgtacttcct attatatgat gcgaggttta gccgactttt tacgcgaaca cagttcgctg
     9481 aatgtgttat tgcaaggcga aaccagcaaa agccgtttat tggaaaaatt tgtgaaagaa
     9541 gatcacagcg tgttggtggc gacccaaagt ttttgggagg ggattgatgt gcgaggcgat
     9601 gatttatcgt tggtgattat tgataaattg ccgttcactt caccggacga accattactc
     9661 aaagcccgaa tggaagattg taagatacag ggcggtgatc cgtttaacga tattcaaatt
     9721 cccgaagcgg tgattaccct caaacaaggt gtagggcgtt taattcgtga tgtgaccgat
     9781 agaggtgtag tgattatttg tgattcccgt ttggtgatgc gaaattatgg gcaaactttc
     9841 ttgaaaagtt taccgccgtc tagacgcact agagatttgg ggaatgttat tcaatttttg
     9901 aaacaaaaat agggttacaa gcggtcagat ttctgcagat ttttgcaaaa aaacggataa
     9961 aaataaccgc ttgttgagga gttatatgtt gtctacattg ctgcgtatgg ttgcttcttt
    10021 ggcattgtta tttgtgatgc tttatttagg caagttaatc gtttatctat tccccatcgg
    10081 gatcccggat agtattttag gtatgcttat cttattcggc tgcttggtta tcggcattgt
    10141 taaagtggaa tgggtgatac cgagcgcgaa accgctcaca cgttatataa cactattttt
    10201 ccttccgatt tgtgtcgaac tcatcgaaca tcttgagctg ttacgccaaa atctgaacac
    10261 ttttgtatta gcaacggcat taagcacctt agtttctgtg gtcgcgattg gcgtgtttgc
    10321 acagtggatt tttcattaca agagagggta aaatgagcta tctttacact gtgttgacgg
    10381 taatcatgtt tattgccggt ttgaaaatca gccaaaaact caagagcagt tttctgaacc
    10441 ctttcttaat tgcactcgct ttgctaattg gtgtattact gatttttaat atcccttacc
    10501 aagactatta tcaaggtaat tcccccttga ataacttact tggcgtttct gttgtggcac
    10561 ttgcttaccc tttttatgaa caattacccc atatccgtaa aaaatggcga cagattgtcg
    10621 tgattttgct gtttagtacc atcattacga tgataaccgg gcttgggttt tcattattat
    10681 ttggggcaag ccaagagatc ttagccgcca ttttgcctaa atcggtatca atgccaatgg
    10741 caattattat tacgaatgaa attaatggaa atgttgcaat cgcagcggtt ggggtgatga
    10801 tcgcaggctt agtgggatct attttaggct ttacgcttct gcgcctggca aaagtaagaa
    10861 atgtgatggt gattgggtta agtatgggag ctgcttccca cgcattaggc acggcaagat
    10921 gcttagagca tagtatgaaa gccggtagct atagttctat cgcattagtg gcttgtggtg
    10981 tgctgtcttc tatatttgca cctttaatat ttaacgttat cgtcacgtta tgttactaaa
    11041 aacagtgaaa tctcaaacct tatttggtaa ctggctgaaa tcaaggtaca ataccgtgat
    11101 ttttcaatga aaatagagaa ttatgcaaga acaaataaca caagaaaaag atctttctac
    11161 gcttaaaacc tttaagcgtt tatggccgac tatcagcccg tttaaagcgg gtctgattac
    11221 aggtgctgtc gctttagtat taaatgcgtt agtggattct agtcttatct atctcctcaa
    11281 acccttgcta gatgaaggct ttgggcaagc taataatgat tttctgaaat tgatggcggt
    11341 gcttgtagta gtttttattt tagtgcgcgg tattaccaat tatattgcca gttactgttt
    11401 agcttgggtg tcaggcaagg tggtaatgac attacgccgc catatttttc aacatttaat
    11461 gtatatgccg gtaagctatt ttgataacaa cccgaccggg cgtttgctct cacgagtgac
    11521 ttacgatacc gaaatggtgg cgagttctgc ttctcattct ttagtgacta ttgtgcgtga
    11581 aggggcttat ctgctgtcat tgtttgtggt gatgatctat accagttggc agctttctat
    11641 tgtgttattt gtgatggctc ctatcattgg ggtactgatc agtttcgttt caaaatattt
    11701 tcgtcaatta agtcgcaata tccaaagttc aatgggggag cttactgtca cgacagaaca
    11761 aatgcttaaa gggcataagg ttgtactttc ctttggtggg caggaaattg agaaagcacg
    11821 ttttgatcga gtcagtaatg atatgcgtcg taaagggatg aaagtcgttt ctgctgatgg
    11881 catttctgat ggtgtggtac agcttatcgc ctcttttgcg ttatctgctg tgctttatgt
    11941 tgcgaccttc cccgaggtga tgagtgagaa tttaaccgca ggttcattca cagtagtgtt
    12001 ttcttcgatg atggcaatgt tacgtcctct aaaatcactc accaatgtga actcgcaatt
    12061 ccaacgtgga atggcagcct gccaaacgtt atttgaattt ttagatttaa aaactgaaaa
    12121 agatcacggc ttaatctccg ttgctaaagc tgaaggcaat gtggaattta aaaaggtaag
    12181 ctttagttat gaaggtaaag aggaaaaagc actcgataat atttctttca ccattcctaa
    12241 aggcaaaaca gtagcattgg ttgggcgttc cggctcgggt aaatcaacta ttgccaattt
    12301 gcttacccgt ttttatgatg tgactgacgg tcaaattttg cttgatggaa ttaatattca
    12361 agattaccgc ttaaaaaact taagagaaca atgctcggtg gtttctcaac aagttcattt
    12421 gtttaacgat actattgcta ataatattgc ttatgctgca atcgacaaat acagccgaga
    12481 agaaattatt gctgctgcaa aagctgcaca cgcaatggaa tttatcgaaa aattggaaaa
    12541 tggcttagac actgtaattg gtgaaaatgg cgcaagtctt tccggtgggc aacgccaacg
    12601 cttggcaatc gctcgtgcat tactgcgaaa ttctcctgtg cttgtgctgg atgaagctac
    12661 ctctgcatta gatacggagt cagaaagagc gatccaatct gcacttgaag tgctacagaa
    12721 agatcgtacg gtgttggtca tagcacaccg gttatcaacg attgaaaaag ccgatgaaat
    12781 tttggtagtc gatcacggaa atattattga gcgtggcagc catacggaat tgttagcaca
    12841 aggtggggct tataaacaac tccatagttt acaattcgga gcctaatttg taggggagaa
    12901 atatgtttct ccccaattaa tgataaaaac agggcgaaaa atatttcgtc cctacaataa
    12961 tttatttgga tactatgaaa aaactgacaa aacttttatc tcttagtgct ttactggtct
    13021 taaccgcctg taattcggta ctaaatgcct caacagaggt gcaacaacca acagtacaaa
    13081 ttccgcatga cgatccacaa tggcagcagc atttagcgaa actgagccaa attcaaggct
    13141 atactgcaac ggggcaattt ggctatattt cgcctgaaga gcgtttttct tcccatttca
    13201 actggcgtta tactaatcca atccaatttg ggttagagct ttcctcgaat ctctcgacta
    13261 aatcactgaa attagagcgt aataaacgag gcttaacggt ttcggacaat gagggtaata
    13321 gccgttctga ccgtgatgtt gatgcgttaa tgcaagagat tatcggtgtt tcgtttccta
    13381 tcgatcagtt tgcctattgg gtaaaaggct tgcctgaaaa agatggcaac tatattgtga
    13441 atgaaaaacg ccagctgtcg caatttagtt atccgcttaa tggcacgctt tggaaagcaa
    13501 gctatgtgga gtatcacgaa gatcgtgtac caaacttacc gaagctgatt gtgcttgaaa
    13561 acggcactca aacgttgaag atccgcattg aaaaatgggc gtattaatga agaaagtcac
    13621 cttacccagc ccggcaaaat taaacctgtt tttatacatt accaataagc gggcagacgg
    13681 ttatcacgag ctacaaacgc tgtttcagtt tttagatttt ggtgatgaaa ttgagattga
    13741 gatcacagaa agttcagagg ttgaattaat taatccggta gaaggggtgg caactgagga
    13801 gaatctcatt taccgagcag caaaactttt gcaaaaaacg accgcttgta ggcaaggctg
    13861 ccgtattggg attaaaaaaa acctaccgat gggcggaggt gttggtggtg gatcttctaa
    13921 tgctgcaaca gtattagtcg gtttaaatca cttgtggaat accgagcttt cattggaaaa
    13981 attggcagaa ttaggcttaa gtttaggggc tgatgtgccg atatttgtta gaggtatggc
    14041 tgcttttgcc gaaggcgtgg gggaggtgtt aactccttgt gatccacaag aaaaatggta
    14101 tgtagtgcta aaaccagaag tgtcgatttc aaccgcagcg gtgtttaccg acccgaattt
    14161 acctagaaat acgccaaaac gccccttagc cgaattatta tctttaccgt gggaaaacga
    14221 ttgcgaaaaa gttgtacgag aaaagtattc tgcggttgaa gatcttatac aagaattgtt
    14281 acaatatgct cagtttaggc taacaggcac aggtgcttgt attttcgccg aatttgaaac
    14341 aaaagcagaa gccgagcagg tttttgcaca taaaccggaa gccgtcttcg gttttgtggc
    14401 gaaagggcaa aatatttcgc cattacatca aatgttattc caaatctaac catcttaacc
    14461 ttaaggatca atccatgaca gatattaaac tgtttgcggg caacgcaact ccggaacttg
    14521 ctaatcgtat tgcaaaacat ctttatacct cattaggtaa tgcaacagtt ggtcgtttta
    14581 gcgatggtga aattcaagta caaatcaatg aaaatgtgcg tggaggcgat atttttattg
    14641 tgcaatccac ttgtgcacca actaatgata atttaatgga attgatcgtg atggtagatg
    14701 cgcttcgccg tgcatcagct ggtcgtatta ccgcagtgat tccgtatttc ggttatgcac
    14761 gccaagacag acgcgtgcgt tcggcccgtg tgccaattac cgcaaaagtg attgctgatt
    14821 tcttatccag cgtaggggta gatagagtct taacctgcga cttacacgca gagcaaattc
    14881 aaggtttctt tgatgtgccg gtagataacg tatttggttc ccctgtgtta atcgatgata
    14941 ttttgaaaaa atccgatttg gtcaacccta tcgtggtttc tccagatatt ggtggggttg
    15001 ttcgtgcaag agcggtggca aaattattaa atgataccga tatggcaatt attgataaac
    15061 gtcgtccaaa agcgaatgta tcacaggtaa tgcacattat cggtgatgtg gctgatcgtg
    15121 actgtatttt agttgatgat atgatcgata ctggtggtac tttagtcaaa gcggctgaag
    15181 cgctgaaaga acgtggcgcc cgtcgtgtct ttgcttatgc cacacacgcg gtattttcag
    15241 gcacagcagc tcaaaattta gcgaatcctg ctttagatga aattgtagta actgatacta
    15301 ttccactgag taatgagatt aaagcattaa ataaagtacg tgttttaaca ttatccggta
    15361 tgttagcaga agcaattcgc cgtattagca atgaagaatc catttcagca atgtttgatg
    15421 cctaatttat gagaaaaaac ccagtcgaaa gattgggttt ttcatatctg ttcactacta
    15481 tatttagttt aagataattt gtatgtattc cctgattcgt aaattacttt ttgcactaga
    15541 tacggaaaaa gcacatcaat tctctattca ggcacttgct ttagccggaa aatcgccttt
    15601 ttcgattctg ccaacacccg ataatccgac ccaagtaatg ggactcacgt ttaaaaatcc
    15661 aatagggctt gcagccggag cggataaaaa cggtgaagcg atagatggtt ttgggaaatt
    15721 aggatttggg tttattgagg ttgggactat tactcctctc gctcaagacg gaaaccctaa
    15781 accgaggcaa tttcgtattg tagatgcaga gggaattatt aaccgcaatg gatttaataa
    15841 taaaggcgtt gatgttttag tagaaaatgt aaaaaatgca acctatagtg gtattttagg
    15901 tattaatatt ggaaaaaatg cggttacacc aattgagcat agctttgatg actaccaaat
    15961 ttgtttgcgt aaggtttacc aatatgctga ttatgtggcg gtgaatattt catcacccaa
    16021 taccaaaaat ttgcgcagtt tacaatatgg tgaggcatta gatgatttgc tgcgaaacct
    16081 caaaaatgag caggcacaac tttcgcaaaa aatggggaaa tatcgaccgc ttgttttaaa
    16141 gattgcgcct gatttaaccg atgaagaaat cgtttctgta gccgatagtc ttattcgtta
    16201 ccaaattgat ggggtgattg ccggcaatac taccttgtct cgtgaaagta ttgccggatt
    16261 accgtattcg gaacaactgg gtggattaag tggcaagcca ttacactcat taagtacaag
    16321 gttaatttca aaattatctg ccgagttggg cgagagaata ccaattatag gttgtggggg
    16381 agtccattcg ttagagagtg ggcaggagaa agtgaatgca ggtgctagtt tattgcaagt
    16441 ctattccgca atgatttacc aaggaccatc attaattcaa accttagcca aacaccttca
    16501 gctgaacagt tagggataga tttctagtta aaaatgattg gttaggttta tttctgtcat
    16561 cttagtggaa tagatggcgg tattagctat ctatcaaaaa tagacaaaat tg
//
LOCUS       DANLXD010000056        16496 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.056, whole genome shotgun sequence.
ACCESSION   DANLXD010000056 DANLXD010000000
VERSION     DANLXD010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16496
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.056"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..516)
                     /locus_tag="PXD18_001498"
     CDS             complement(<1..516)
                     /locus_tag="PXD18_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL6301928.1"
                     /translation="MLDSLKEVNQKLDKKADKVGGGTKEDALVTLDTLIASGTVKAET
                     AMSLLPTLQKGAVATGASSEDMAKIAISSMQQFGIKEEDIGRALDMAVAAGQAGSFEL
                     AYMASWLPQQMAAAKQAGLSSIEGFERLLIANQQARVTAGTSDEAGNNLVNLLGKITA
                     KETNERFKNIEY"
     gene            615..866
                     /locus_tag="PXD18_001499"
     CDS             615..866
                     /locus_tag="PXD18_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6301929.1"
                     /translation="MAPTISDGDQMLVDFSKKEARGDDKIYLVQNGESVWVKRVRKVW
                     DYVELISDNESYRPIRITADEAQNLQIIGQVVHIGHSLV"
     gene            complement(1062..1262)
                     /locus_tag="PXD18_001500"
     CDS             complement(1062..1262)
                     /locus_tag="PXD18_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HDL6301930.1"
                     /translation="MQYVLDLTGYACPLPLLMAKKAMNDLKKGDSLEILLNQQSSLTD
                     FELLAKEQGWLCELQAVENVGY"
     gene            complement(1321..1833)
                     /locus_tag="PXD18_001501"
     CDS             complement(1321..1833)
                     /locus_tag="PXD18_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HDL6301931.1"
                     /translation="MQQLEPQTFASWAEPIDMLYACHSKVKSFCKQLQILPDYLEKNG
                     VNQAVKNDVQQILNYFNISAPLHHEDEEDDFFPELIKVQPQAQAEVDELERQHVHLHK
                     NWDYLSAQLEDLLAGKRENVDRDLIERFVAGYDVHIAIEEPLFELGREHLAQDKLSAM
                     GKVMADRRKL"
     gene            complement(1846..3000)
                     /gene="tgt"
                     /locus_tag="PXD18_001502"
     CDS             complement(1846..3000)
                     /gene="tgt"
                     /locus_tag="PXD18_001502"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HDL6301932.1"
                     /translation="MKYELKTTSGNARRGRLTFNRPKGEFHVETPAFMPVGTYGTVKG
                     MTPEEVKATGAQILLGNTFHLWLRPGQEVMKMHGDLHDFMQWHGPILTDSGGFQVFSL
                     GKLRKIKEEGVTFQNPISGEKIFLSPEKSMEIQYDLGSDIVMIFDECTPYPATFDYAK
                     KSMEMSLRWAKRSRDRFDELENPNALFGIIQGGIYEELRKVSVEKLVEIGFDGYAVGG
                     LAVGEPKEDMHRILEYVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNA
                     RNGHLFVTNGIVKIRNAKYRADTTPLDPECDCYTCKNYTKAYLYHLDKCGEILGARLN
                     TIHNLRYYQRLMAEIRQAIEEDRFDDFVVEFYARIGKEVPPLQSEVKEQK"
     gene            complement(3059..3199)
                     /locus_tag="PXD18_001503"
     CDS             complement(3059..3199)
                     /locus_tag="PXD18_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301933.1"
                     /translation="MKKLLLCVGILVLAACSSTGVGGSIGAGGGSNGVGIGLGVGTDF
                     RF"
     gene            3293..3865
                     /locus_tag="PXD18_001504"
     CDS             3293..3865
                     /locus_tag="PXD18_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1439 domain-containing protein"
                     /protein_id="HDL6301934.1"
                     /translation="MKILRKFAAVCVVSMAMLSANANLLTISEQEINDYLATKLAEKI
                     PLKDKVGIPKLFELDYRLHSLTSQIGRTEEKKVAISGVVDGLLNAKGKKYAASIHLNM
                     DTTPYYDPQKGALFLKDVRLLSWSATPAKYQAELQMFLPVLADGLSSFLNSTPVYTLD
                     ENKTKEAMVKKFGKAIVVENGNIKLETTIF"
     gene            3967..4185
                     /gene="cspD"
                     /locus_tag="PXD18_001505"
     CDS             3967..4185
                     /gene="cspD"
                     /locus_tag="PXD18_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein CspD"
                     /protein_id="HDL6301935.1"
                     /translation="MDIGIVKWFNNVKGFGFITSDVCEGDIFAHFSEIQAEGYRSLKV
                     GQKVQFELVQGERGASASNITPISEKTL"
     gene            4275..5189
                     /locus_tag="PXD18_001506"
     CDS             4275..5189
                     /locus_tag="PXD18_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6301936.1"
                     /translation="MPSSYQLVLINLLYIFGIGLNIVLLRFLSLHFDPLNNNGIRFLV
                     GGFTLLFFILWRFRTSLSQLIKTPKLIAISLFVGLMMSANMYFWLKGVKITNAVTVSI
                     FGVLAMPFGVIIAAIFFQDERERIKSKAFWFGSILTIIGSLGFIWHGKTLSIGEGFIL
                     GSVFLFLSIIIRNIQNLVVKFARELNVLTLSCVTSLTTSLSSLLLSQQAGKFNELFTA
                     PNWLLFSLMVAGIYAIMIGMVLTFHIIQTQGLITYQVLELLMPVSTAIIAYILLDERI
                     SIVQMGFACIVILGSSIALKLVKYPKHY"
     gene            5308..6168
                     /gene="araC"
                     /locus_tag="PXD18_001507"
     CDS             5308..6168
                     /gene="araC"
                     /locus_tag="PXD18_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose operon transcriptional regulator AraC"
                     /protein_id="HDL6301937.1"
                     /translation="MYKNLSLLSPTYPFDLEFIAGLTQCEKGNYLDSIVDRQQGMHGY
                     MLQLTTFGRGSVFDGKHVFTAHRGQLLLFTPNAVQHYHRHPESQYWHYKWVYFQPNPK
                     WNKWLNWSDMEEKIGRITISDDRYFQEISQLFSKIELELKSSKFFKEDIATSLLEYLL
                     MKCISAEKIEVIPVIDQRILTVCDLILTNLAKNESLEAMAEKVFLSPSRLSHLFKQSL
                     GISLVQWRELQRISESKKLLYFSNISISNIAKSLGYEDSLYFSKIFKKHTGLSPSEFR
                     TLERRKDSEM"
     gene            6355..7329
                     /locus_tag="PXD18_001508"
     CDS             6355..7329
                     /locus_tag="PXD18_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDL6301938.1"
                     /translation="MKKPTFKHALFSSILALACYGSAFANDVVNISKIDGMPWFNRMA
                     EGVVQAGKDNNINAYQVGPSNTDAPQQVKLIEDLIAKKVSAISIVPNDANALEPVLKK
                     AKQNGIVVLTNESVGQPSADWDIEIIDNAQFAADYVEEVAKAMGGKGGYVIYVGGLTV
                     PQHNLWADLFVKYQKEHYPDMFEVTSRMPVAENINDARRTTIDLVKAHSDLKAVVSFG
                     SQGPIGAGLAVKEKRLKNKLNVFGMMIPSQAANLIKSGDITMGITYDPANAGYALAAV
                     AAKVLKGEKIEDGLEIPTVGKAKVDSEKKLLQFHNVLKVTKENIDKLY"
     gene            7384..8874
                     /locus_tag="PXD18_001509"
     CDS             7384..8874
                     /locus_tag="PXD18_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL6301939.1"
                     /translation="MAFISMRHISKTFHGIKALNQVNLSLDYGEALCLAGQNGCGKST
                     LIKILSGVYQPDKGAEIQIGATQYTKLTPQESIDKGIQVIYQDLALFPNLTVAENIAI
                     NLHRKFGWVSQDHIHQVALTAIQSINANLDLNAILEDLPIAQQQLVAICRALAQNARL
                     LIMDEPTASLTAKEVKDLLDVVIKLKSKGISIIFVSHKLQEVMSVSDSVLVLKDGNMV
                     GQYPIREMNEKRLGFLMTGLEIDYKRLDLPDFLQRKTVLEVRNLTLPHQYQEINFSLR
                     EGEIVALTGLLGSGRTELCLSLFGITQPQSGDILLNGEKVIFNTNRDAIAKGIAYVSE
                     DRMHTGLIMAESIHHNIISTIFHKITDKLQIIQSSKAYASSQALIDSLKIKVSDSDLP
                     VNTLSGGNAQRVSIAKWLAIDPKIIILDAPTIGVDIANKEGIFQIIKSLAQQGIAVIF
                     VTDEVEETYYNSHRVIVMKKGRIVDEILPAYSSEKSIAEVIYENQQ"
     gene            8858..9817
                     /locus_tag="PXD18_001510"
     CDS             8858..9817
                     /locus_tag="PXD18_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6301940.1"
                     /translation="MKISNNHILSSTLLILILLLTLFTRDFATIENLYDVVNNYAMLM
                     ILACGLFVVLLSGGIDISFPAITIISQYVMVTLIGKYDVGFAGVFVISSTIGILLGFI
                     NALFVNRLSVPSIIITISTLNIFYGGLLYFTKGVWLYEYPEWFTQEIVFFKQITAEGV
                     EFGLSFQALMAILAVILTGLITNKLTIGRKIYALGGNPDATSRIGFNLLFLHLFAYGY
                     MGFMAGLAGIVQSYTVQSVAPDSLLGYELTVLAAVVLGGASLSGGRGTLLGTVMGVML
                     LAIIQNGLNLMNVSSYWQTIITGIIIILSISATALSQRKKQGA"
     gene            9820..10770
                     /locus_tag="PXD18_001511"
     CDS             9820..10770
                     /locus_tag="PXD18_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6301941.1"
                     /translation="MKSKLDPTIFYLLALFAVAVIAFSIFIPDIFWSVSNFQSMASQI
                     PVLGILTLAMALPMLTGGINLSIIAGMNACSLIIAYFITQYTGISWLFIAILLSLCCA
                     LAIGLLNGTLIAIIRVSPILATLGTMTLINGINILVTNGSTIANFPETMLSINASAFL
                     WIPLPILIFLFLAGLIWFFLEKTAMGKAVYFIGNNEKATYYSGINTKKVLIWVYVISS
                     ILCVFAAILMMSKLNSAKASYGDSYLLISILAAVLGGINPDGGKGKLLGIMLALVLLQ
                     VIESGLNMLGISSYITMILWGSLLLFFIFLQKNRLFRLTQ"
     gene            10783..12378
                     /locus_tag="PXD18_001512"
     CDS             10783..12378
                     /locus_tag="PXD18_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HDL6301942.1"
                     /translation="MQNEKQLIEQGNTVIGIELGSTRIKAVLISSDGTILATGGADWE
                     NRLIDGIWTYHQNEIWEKLQAAYMDLSKTVKEKYHTTIRTAKALGISAMMHGYLPFDK
                     HGNPLVAFRTWRNNITLTSSEKLTALFQYPIPQRWSIAHLHQALLNQEPHLPEIDYLT
                     TLSGYVHWQLTDHKVLGIGDASGMFPIDTELKSYNPTMLAQFDRAIADYRMPWKLEAI
                     LPQVRVAGEQAGKLTEKGAKLLDPTDNLQAGIPLCPPEGDAGTGMIATNCIKEKTGNI
                     SAGTSAFAMIVLEKALSKAYSELDIVTTPAGKLVAMAHANNCTSDINAWVNLFGECLS
                     VFGVNICTEELYEMLFLHALQGDADCGGLLSYGFHSGEHNVGLSEGCPVFLHPTNAHF
                     NLANFMRTHLYTAFGAMKLGMDILINQEKVEISRILGHGGIFKTEGVAQKILSSALNI
                     PLATASTASNGGAWGIALLADFLSVSDRYSLEEYLDNCIFNTTKLNLVQPDKTMSEGY
                     ERFMQRYKQGIPVVEKALFLNTD"
     gene            12608..13810
                     /gene="yedE"
                     /locus_tag="PXD18_001513"
                     /pseudo
     CDS             12608..13810
                     /gene="yedE"
                     /locus_tag="PXD18_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005824242.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
     gene            13846..14115
                     /gene="yedF"
                     /locus_tag="PXD18_001514"
     CDS             13846..14115
                     /gene="yedF"
                     /locus_tag="PXD18_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007241376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDL6301943.1"
                     /translation="MAFTVVQKLDKDPKDITPDYTLDTLGEPCPYPAITMLETMPQLQ
                     KGEILELLSDCSQSINNIPIDTKNHGYTLLSVEQNGTKLRYLIQR"
     gene            14215..14559
                     /locus_tag="PXD18_001515"
     CDS             14215..14559
                     /locus_tag="PXD18_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HDL6301944.1"
                     /translation="MNKYALLAIFWFIIGIYALLFRESTNDIPPFPHFDKVSHFALFF
                     IQIWLSANAFIRSKKGIPYFGLIIFALLYAFTSEWAQATFTSTREGSWLDGLADMLGA
                     SLSLLLVKYCKK"
     gene            complement(14622..15569)
                     /locus_tag="PXD18_001516"
     CDS             complement(14622..15569)
                     /locus_tag="PXD18_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HDL6301945.1"
                     /translation="MNRITQILNIKHPIVQAPMSWLTDAHLVASVAEAGGLGFLAPHA
                     GQTTNPTSNEEVLDRMRNEIRKVKALTDKPFGVPFILSYDFSLIPLMVDLFIEERVPV
                     VLDNGWLDPEIYAKFKAAGIKIICRLPNPNLADALKAQALGADILVLTGFDEGGTLPM
                     KEVGSFNVLAEFVGKVDLPIMLAGGIADKKAVQAALTLGAEGVWIGTAFIATEECRAS
                     EKVKNWIVEANANDLLLFRTEPHYYRSLPTGLAKKCFEMSENGATRSEIAKVMNAGTG
                     MRLGMLEGDFDNGYVSVGNGISQINKIKSVKELIDELMA"
     gene            15752..>16496
                     /locus_tag="PXD18_001517"
     CDS             15752..>16496
                     /locus_tag="PXD18_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301946.1"
                     /translation="MSIRWENIKPLQGSQNSAFEELVCQLARQEFKSQGKFTRISAPD
                     GGIEAMCELPDGSVCGWQAKYFLSSFSSSQWQQIEDSFKESLKNYPKLTKYYVCVATD
                     RANANVSGKKSFLTKWEEYTQRWKDFAQSQGREIEFEFWGSFELSDLLSKPENAGKKF
                     FWFNESELSDKWFEQYNQQAINNLGVRYTPEINVDLPIAMQLESLARTQIFKKHLSDE
                     FHKLLVEIKSQYKSLYRYEALENHFEPVYE"
BASE COUNT         4848 a         3325 c         3196 g         5127 t
ORIGIN      
        1 atattcaata tttttaaaac gctcatttgt ttctttagct gtaatcttac caagcagatt
       61 taccagatta ttacctgcct catcgcttgt accggcagtg acacgagcct gttggtttgc
      121 aattaaaagt cgctcaaagc cctcaatact actcaaaccg gcttgttttg cagctgccat
      181 ttgttgaggc aaccaacttg ccatatatgc aagctcaaaa ctacctgctt gcccggctgc
      241 aacagccata tccaatgccc gcccaatatc ctcttctttg atgccaaatt gttgcataga
      301 ggagatcgca atttttgcca tatcctccga gcttgcccct gttgccaccg cccctttctg
      361 caaagtaggt aatagactca ttgcggtttc ggctttgact gtaccggagg caatgagcgt
      421 atcaagcgta actaacgcat cctcttttgt gccaccccca accttatccg cctttttatc
      481 aagtttttgg tttacttctt tgagcgagtc taaaatatcg tccagctttt ccttaagagc
      541 cttattcaga cagcctatta agcctaggcg taaaagccca taattgtggc gtattttggg
      601 ctaatggcac atcaatggcc ccgactatca gcgatggtga tcaaatgtta gtggatttca
      661 gcaaaaaaga agcccgtgga gacgataaga tttatcttgt gcaaaatggt gaaagcgttt
      721 gggtaaaacg tgtaagaaaa gtgtgggact acgttgaatt gattagcgat aatgagtcct
      781 accgcccaat ccgaattaca gcagacgaag ctcaaaactt acaaatcatc gggcaggtag
      841 tccacatcgg acactcttta gtttaaaaca gatttaaaat agttttaaaa ccgatcaaac
      901 ctatgcaaaa aatatcgcaa aaactgccca tttttttcta atcctgctca ttttgttttt
      961 tgcatagccc caaccaaaca ataacggcga acccttgtat tcacggggct cgccgttatt
     1021 tttccgccca aatttttttc tttctctcta tgcaaaaaag atcagtaccc cacattttca
     1081 accgcttgta gctcacaaag ccaaccttgc tctttggcaa gcagttcaaa atcggtaagg
     1141 ctactctgct gattgagtaa aatttccaag ctatcgccct ttttaagatc gttcatcgct
     1201 ttttttgcca ttaataacgg caaggggcag gcatagccgg ttaaatctaa aacatattgc
     1261 atagcgaaat agggaataaa gaaaaagggc gaatattgaa attcgcccaa tcacaaaaga
     1321 ttagagttta cggcggtctg ccatcacttt gcccatagcc gataatttgt cttgagctaa
     1381 atgctctcgc ccaagctcaa agagtggctc ttcaatcgca atatgcacat cataacctgc
     1441 cacaaaacgc tcaattaagt ctctatccac attttcacgt ttacctgcga gcagatcttc
     1501 aagctgtgcc gacaaatagt cccaattttt atgtaaatga acgtgctggc gttccagttc
     1561 gtctacctct gcttgagctt gtggttgcac cttaataagc tcagggaaga aatcatcttc
     1621 ttcatcttcg tgatgtaaag gggcagaaat gttgaagtag ttcaaaatct gctgcacgtc
     1681 attcttcact gcttggttta ccccgttttt ctcaaggtaa tccggcaaaa tttgcaactg
     1741 tttacagaaa ctttttactt tgctgtggca agcataaagc atatcaatcg gctctgccca
     1801 gcttgcaaag gtttgtggtt caagttgttg catatacact ccttgttatt tctgttcttt
     1861 tacttcagat tgtaaaggtg gcacttcttt gccaattcgg gcataaaatt ccactacaaa
     1921 atcatcaaaa cgatcttctt cgatggcctg gcgaatttct gccattaggc gttgatagta
     1981 gcgtaaatta tgaatggtgt ttagtcttgc ccctaaaatc tcgccacatt tgtctaagtg
     2041 atataaatag gctttggtgt agtttttgca agtgtaacaa tcacattcag gatcaagcgg
     2101 tgtggtgtct gcacgatatt tcgcattacg aatttttaca atgccgttgg tcacaaataa
     2161 atgtccgtta cgggcattgc gggttggcat tacgcagtca aacatatcaa taccacggcg
     2221 aaccccttcg actaaatctt ctggcttgcc tacacccatt aaatagcgtg gtttatctgc
     2281 cggaatttgc gggcaaacgt attctaaaat gcggtgcata tcttctttag gttcacctac
     2341 cgccaagcca ccgactgcat agccatcaaa gccgatttca actaattttt ccaccgagac
     2401 tttgcgaagt tcttcataaa taccaccttg aataatgcca aataacgcat tcgggttttc
     2461 aagttcatca aagcgatcac gagaacgttt cgcccaacgt agtgacattt ccatcgattt
     2521 ttttgcataa tcaaaggttg ccggataagg agtacattca tcaaaaatca ttacaatgtc
     2581 tgatccaaga tcgtattgga tctccattga tttttccggc gaaaggaaaa ttttctcacc
     2641 gctaatcggg ttttggaaag ttacgccttc ttctttaatt ttacgcagtt tacctaagct
     2701 aaaaacttgg aaaccgccgg agtcggttaa aatagggccg tgccattgca taaaatcgtg
     2761 caagtcaccg tgcatcttca tcacttcttg ccccggtctt aaccataaat ggaaagtgtt
     2821 gcctaataaa atttgcgccc ctgtcgcttt aacttcttca ggagtcattc cttttaccgt
     2881 gccataagtg ccaacaggca taaatgccgg tgtttcaacg tgaaattcgc ctttcgggcg
     2941 gttaaaagtt aaacgcccac gacgagcgtt accacttgtt gtttttaatt cgtacttcat
     3001 tttaatccac aaataaacag ttcgtgaaag cggtcaaaaa ccaccaaaaa tttaccaatt
     3061 agaatcgaaa gtcggtgccg acccctaagc cgattccaac gccgttagag ccaccaccgg
     3121 ctccaatact gccacccaca ccggttgatg agcaagcagc taacactaaa atgccaacgc
     3181 ataataagag ttttttcatt ttttgctgtc ctaaacgaaa aagagagtct atgatagacc
     3241 caatgtattc taacctgttt aatggattaa acctaatttt aaagggtaaa ttatgaaaat
     3301 tttacgtaaa ttcgctgctg tatgcgttgt ctcaatggct atgctctctg ctaacgctaa
     3361 tttgctcact attagcgagc aggaaatcaa cgactattta gccaccaaat tagctgaaaa
     3421 aattccttta aaagataaag tcggtattcc taaattattt gaattggatt atcgcctgca
     3481 ttcacttacc agccaaattg gcagaaccga ggaaaaaaaa gtagctattt ctggcgttgt
     3541 tgatggactt ttaaacgcaa aaggcaagaa atatgctgcc tctatccatt taaatatgga
     3601 taccacgcct tattatgatc cacaaaaagg ggcattattt cttaaagatg tcagattgtt
     3661 aagttggtct gcaacaccgg ctaaatatca agcagagctg caaatgtttt tgccggtgtt
     3721 ggctgatgga ttaagtagtt ttttaaacag tacgcctgtt tatactttag atgaaaataa
     3781 aacaaaagaa gcaatggtga aaaagttcgg caaagccatt gtagtagaaa atggtaatat
     3841 caagctagaa accactattt tttaaataat tttgtgatct tcgtctaatt tttacacttt
     3901 gatagttgag cttttacgcg ttttatttac aatccaaata tcgccattca ttatttggag
     3961 agttctatgg atatcggtat tgttaaatgg tttaacaatg taaaaggatt tggttttatt
     4021 acatcggatg tatgtgaagg agacattttt gctcattttt ctgaaattca agcagaaggt
     4081 tatcgctctt taaaagtcgg ccaaaaagta cagtttgaat tagttcaagg agagcgaggt
     4141 gcctcagcct caaatatcac gcctataagc gaaaaaacgt tataatccgt cgttaataaa
     4201 attattgtta taaccatact ttattagatt ttaaagctca gcttttacag ctgagccatt
     4261 tttgcttttt gaatatgcct tcctcttatc aattagtctt aattaaccta ctttatatct
     4321 tcggtattgg tctaaatatt gtactgctta ggtttctcag tttgcatttt gacccattaa
     4381 ataataacgg tatacgtttt cttgttggtg ggttcacctt attatttttc attttatgga
     4441 gattccgcac atcgctgtct cagctgatta aaactccaaa attgattgcg atttctctat
     4501 ttgtcgggtt aatgatgtcc gcaaatatgt atttttggct aaaaggggtc aaaattacaa
     4561 atgctgttac cgtctctatt tttggggtat tagctatgcc atttggtgtg attattgccg
     4621 ccatattctt tcaagatgaa agagaacgca ttaaaagcaa agctttctgg ttcggctcaa
     4681 ttttaacgat catcggttca ctcggattta tttggcacgg gaaaacactc tcgattggcg
     4741 aaggatttat tcttggttct gtgttcttat ttttgtcgat cattatccgt aatatacaaa
     4801 acctagttgt aaaatttgct cgagaactga acgtattaac cctaagttgt gtaacatctt
     4861 taactacttc actctcgagt ctattactta gccaacaagc aggtaaattt aatgagcttt
     4921 ttactgcacc aaactggcta ctattctctc tgatggttgc tggtatttat gcgattatga
     4981 tcggaatggt attaaccttt cacattatcc aaacccaagg actgataacc taccaagtat
     5041 tggaactatt aatgccggtt tcaacagcca tcattgctta tattttactg gacgaacgta
     5101 tttccattgt tcaaatgggc tttgcttgta ttgtgatttt aggctcaagt atcgccttaa
     5161 agttagtaaa atatcctaag cactattagg atctttgcta attaatattg gtaaaattac
     5221 atttggttta ctaatctgag cgttcattca ttagtaatga taaacaagcg gttatttttt
     5281 gttatttttt ggtaaatact gatagtcatg tataaaaacc tttctttgct ttcaccgact
     5341 tatccatttg accttgaatt catcgccggt cttactcaat gtgagaaagg taactatctt
     5401 gattctattg tcgataggca acaaggaatg cacggttata tgcttcaatt aaccactttt
     5461 ggtcgtggtt ctgtttttga tggtaagcac gtttttaccg ctcatcgagg gcagttactc
     5521 ctctttacac ccaatgccgt tcaacactac caccgtcacc cggaaagcca atattggcac
     5581 tacaaatggg tctattttca gccgaatcct aaatggaata aatggctgaa ttggtcagat
     5641 atggaagaaa aaataggacg tatcaccatt agcgatgatc gttactttca ggaaattagc
     5701 caacttttca gtaaaattga attagaactt aaatccagta aattttttaa agaagatatt
     5761 gcaacaagtt tgttggaata cttacttatg aaatgtattt ccgccgagaa aattgaggtt
     5821 attcctgtca ttgatcaacg cattttgaca gtttgtgatt taatcttaac gaatttggct
     5881 aaaaatgaga gcttagaagc aatggcagaa aaagtatttt tatcgccatc tcgcctctca
     5941 catcttttca agcaatcgct ggggatcagc ttagtgcaat ggcgggaatt acaacgcatt
     6001 tccgaatcca aaaaattgct ttatttctct aacatctcta tctctaatat tgcgaaatcc
     6061 ttaggctatg aggattctct ctacttttcc aaaattttca aaaagcatac cgggctgtca
     6121 ccctctgagt ttagaacctt agaacggcgt aaagacagtg aaatgtgatc ttgatctcac
     6181 tttactttgc atagcagaat tttccatatc gataacaaaa agttacctgt ttttctctca
     6241 ttcaaaagca taagatacaa acagctttaa tagtgctgtt tctattagag aagggatatc
     6301 aagctctgtg agtgatattc agtgaaataa cttcttatgt atgagggaag aacaatgaaa
     6361 aaaccaacgt tcaagcacgc attattttca agtattttag ctttagcctg ttacggctcg
     6421 gcatttgcca atgatgttgt taatatctcc aaaattgacg gtatgccgtg gtttaatcgt
     6481 atggcagagg gtgttgtgca agcaggcaaa gataacaata tcaatgctta tcaagttggt
     6541 ccatcaaata ccgatgcacc acaacaagta aagttaattg aagatttaat tgcgaaaaaa
     6601 gttagtgcta tttccatcgt ccctaacgat gcaaatgcct tagaaccggt actgaaaaaa
     6661 gcgaaacaga acggtattgt ggtattaacc aatgagtcag tcggacaacc tagtgccgat
     6721 tgggatattg aaattatcga taatgcacaa tttgcagcag actatgtaga agaagtagca
     6781 aaagctatgg gcggaaaagg cggctatgtg atttatgttg gtggtttaac cgtgcctcaa
     6841 cataatctgt gggctgattt attcgtgaaa taccagaaag agcattatcc ggatatgttt
     6901 gaagtgacca gcagaatgcc tgttgccgaa aatattaatg atgcacgccg taccaccatt
     6961 gatttagtga aagcccattc cgatcttaaa gcggtcgttt cttttggttc acaaggtcct
     7021 attggtgcag ggttggcagt gaaagaaaaa cgcttaaaaa ataaattaaa tgtcttcgga
     7081 atgatgattc cttcccaagc agccaattta attaaaagcg gtgatattac aatgggaatt
     7141 acctatgacc cggccaatgc aggttatgct ttagctgctg tcgctgccaa agtattaaaa
     7201 ggcgaaaaaa ttgaggatgg attagagatc ccaacggtcg gtaaagccaa agtagatagt
     7261 gagaaaaaac tacttcaatt ccacaatgtg ctgaaagtca ccaaggaaaa tatcgataaa
     7321 ttatattaat ttgcttgaaa tatgggctga tagccagccc atattttccc tcaggaggca
     7381 cttatggcat ttatttcgat gcggcatatc agtaaaacat tccacggcat aaaagcatta
     7441 aatcaagtca atctctcatt agattatggc gaagcacttt gtcttgccgg tcaaaatggc
     7501 tgtggaaaat caaccttgat caaaattctt tccggcgttt atcaaccgga taaaggggct
     7561 gaaattcaaa ttggtgcaac ccaatatacc aagctgacac cacaggaatc gattgataaa
     7621 ggtattcaag tgatttatca agatttagcc ctcttcccca atttaaccgt ggcagaaaat
     7681 attgccatta acctgcaccg aaaatttggc tgggtgagtc aagatcacat tcatcaggtt
     7741 gccctcactg ctattcaaag cattaatgca aatctagacc tgaatgcaat attagaagat
     7801 ttaccgatcg ctcaacaaca gttagtcgct atttgtcgag cgttagcaca aaatgccaga
     7861 ttattgatta tggacgagcc gactgcctca cttactgcaa aagaggtcaa agatctgtta
     7921 gatgtcgtca tcaaacttaa aagcaaaggc attagcatca tctttgtcag tcataaattg
     7981 caagaagtaa tgagtgtttc cgatagcgta ttagtgctga aagatggcaa tatggttggg
     8041 caatatccta tccgtgaaat gaatgaaaaa cgccttggtt tcctaatgac tgggctggaa
     8101 atcgattaca agcggttaga tttgccggat tttttgcaaa gaaaaaccgt attggaagtc
     8161 cgcaatttaa cgctgcctca tcagtatcaa gagattaact tttcgctacg agaaggggaa
     8221 attgttgccc ttacaggatt gctcggttca gggcgtactg agctttgcct aagtttattc
     8281 ggcattactc aaccacaatc cggcgatatt ttattaaacg gtgaaaaagt gatatttaac
     8341 actaaccgtg atgccattgc caaagggatt gcttatgtat cggaagatag aatgcacacc
     8401 gggctgatta tggcagagtc gattcatcac aatattattt cgactatttt tcacaaaatc
     8461 accgataaat tacagattat tcaatcctcg aaggcttatg caagtagcca agccttgatt
     8521 gattcattaa agattaaagt atccgattca gatttgcctg ttaataccct ttccggaggg
     8581 aacgcacagc gagtttcgat tgcaaaatgg ctggcaatcg accccaaaat tattatttta
     8641 gatgccccga ctattggggt cgatatcgcc aataaagaag ggatcttcca aattattaaa
     8701 tcattggctc agcaaggcat tgcagttatt tttgtgactg atgaagtgga agagacctac
     8761 tacaacagcc atcgggtaat tgtaatgaaa aaaggtcgca ttgttgatga aatcttgccg
     8821 gcatattcca gtgaaaaatc gattgcggag gttatttatg aaaatcagca ataatcatat
     8881 tctttccagt acgttactga ttttaatcct attattaacc ctatttactc gtgattttgc
     8941 aactattgag aacctttatg atgttgtaaa taattacgca atgttaatga ttttagcttg
     9001 tggtttattt gtggtattgc tgtctggcgg cattgatatt tctttccctg ctatcactat
     9061 tatttcccaa tatgttatgg tcactctgat cggtaaatat gatgtaggat ttgccggcgt
     9121 ttttgttatt tcttccacca tcggcatatt attaggtttt attaatgctc tatttgttaa
     9181 tcggcttagt gtcccttcca ttattattac gatctcaaca ctcaatattt tttatggcgg
     9241 actactctat tttaccaaag gtgtatggct ttatgagtat cccgaatggt ttacccaaga
     9301 aatcgtgttc tttaaacaga taactgctga gggagtggaa tttggattat cgtttcaagc
     9361 attaatggct attttggcgg tgatattaac cggcttaatt accaataaac tcactattgg
     9421 tcgaaaaatt tacgctcttg gtggtaatcc ggatgcaacc tcccgtattg ggtttaatct
     9481 cttatttctc catctatttg catacggtta tatgggcttt atggcaggct tggcaggcat
     9541 agtgcaatct tataccgtac aatctgtcgc accggattca ctactgggtt atgaattaac
     9601 cgtcctagct gccgttgtat taggtggtgc tagtttatca ggtggtagag gcaccctgct
     9661 tggtacagta atgggcgtaa tgttactggc gattattcaa aacgggctaa atttaatgaa
     9721 tgtatcgtct tactggcaaa ccattattac cggtatcatc attatcttaa gtattagtgc
     9781 aacagcctta agtcagcgga aaaaacaagg agcataacga tgaaaagtaa actggatcca
     9841 acgattttct atctcttagc actcttcgca gttgcagtta tcgcctttag tattttcatt
     9901 ccggatattt tttggtctgt cagtaacttt caatctatgg catcacaaat tccagtatta
     9961 ggtattttaa ccctagcaat ggcattaccg atgttaacag gtggaataaa tctttccatt
    10021 attgccggaa tgaatgcttg ctcattaatt attgcctact ttattacgca atataccggt
    10081 atttcttggt tatttattgc tattttatta agcctttgct gtgccttagc cattggatta
    10141 ctcaacggca cattaattgc cattattcgt gtttcaccaa ttttggcaac cttaggcaca
    10201 atgactttaa ttaacggcat taatattcta gtcactaacg gttcaaccat tgcgaacttt
    10261 ccggaaacaa tgttgagtat taatgcttca gcctttttat ggattccgct acccattcta
    10321 atctttctct ttcttgctgg gctgatttgg tttttcttag aaaaaactgc aatgggtaaa
    10381 gcggtttatt tcatcggcaa taatgaaaaa gccacctatt attcgggtat taataccaaa
    10441 aaagtgctga tttgggttta tgttatctcc tcaattcttt gtgtatttgc agctattttg
    10501 atgatgtcta aactcaattc tgcaaaagcc tcttatggtg attcctattt gttgatctcc
    10561 attttagccg cagtattggg cggtattaac cctgatggag gtaaagggaa actattaggg
    10621 attatgctcg ccttagtttt attacaagtg attgaaagtg gcttaaatat gctcggcatt
    10681 agcagttaca ttacaatgat tttatgggga agcttattgt tattctttat cttcctccaa
    10741 aaaaatcgcc ttttccgact aacacagtaa tggtggtaga ttatgcaaaa tgaaaaacaa
    10801 ctcattgaac aaggtaatac tgttattggt attgaattgg gctcaacccg aattaaagcg
    10861 gtgttaatta gctcagatgg gacgatttta gcaaccggtg gggcggattg ggaaaatcga
    10921 ctgattgacg gtatttggac ctatcatcaa aatgaaatat gggaaaaact acaagctgct
    10981 tatatggatt taagcaagac agtcaaagaa aaatatcaca caaccattcg cacagccaaa
    11041 gcattgggaa ttagtgcgat gatgcacggc tacttacctt tcgataaaca cggaaatccg
    11101 ctggttgcct ttagaacttg gcgaaacaac attaccctaa cctcatcgga aaaattgacc
    11161 gcactctttc aatacccaat tccgcaacgt tggagtattg ctcatttaca ccaagcattg
    11221 cttaaccaag agcctcactt gccggaaatt gattacctga caaccctctc aggttatgtg
    11281 cattggcaac tgaccgatca caaagtgtta gggattggcg atgcttccgg catgttcccg
    11341 atagatactg agttgaaatc ctacaatcca acaatgctgg ctcaatttga tcgagccatt
    11401 gccgactacc gtatgccttg gaaattggaa gcgattttgc cacaagttcg tgttgctggt
    11461 gaacaagcgg gcaaattaac cgaaaaaggt gcaaaattgt tagatccaac cgataatttg
    11521 caagctggca ttccactttg tccacctgag ggtgatgccg gaacaggtat gattgcaacc
    11581 aactgtatca aagaaaaaac cggtaatatt tctgccggca cctccgcatt tgcaatgatt
    11641 gtgttagaaa aagccctatc caaagcctat tcagagctgg atattgtgac gaccccggca
    11701 ggtaaattag tggcaatggc tcacgctaat aattgcacct ctgatattaa tgcgtgggtg
    11761 aatttattcg gcgaatgctt atcggttttt ggcgtaaata tctgcaccga agaactttat
    11821 gaaatgttat ttctccatgc cttgcaaggc gatgcagatt gtggagggct attatcctac
    11881 ggcttccact ccggtgaaca taatgtcggt ttatccgaag gctgtccggt tttcttgcat
    11941 ccaacgaatg cccattttaa cttagcaaac tttatgcgaa cccatctcta taccgctttt
    12001 ggtgcaatga aattaggaat ggacattctc attaaccaag aaaaagtgga aatttcccgt
    12061 attctcggtc acggtggtat atttaaaaca gaaggtgttg cacaaaaaat tctgtcttcc
    12121 gcactgaata ttccattggc taccgcaagt actgcttcaa atggcggagc ttggggaatt
    12181 gcattactgg cagactttct cagcgtatca gaccgttaca gtttagaaga atatttagat
    12241 aattgcattt tcaacaccac caaactcaat ctggttcaac cggataaaac aatgagtgaa
    12301 ggttatgaac gctttatgca acgttataag caaggcattc ctgtggtaga aaaagcgttg
    12361 tttttaaata cagattaaat aattataatt taagtatcac aagcggttat ttttgcaaaa
    12421 aacgaccgct tgttatttac atttgtacaa aaaataccta ctataaagac gcatttgtaa
    12481 aatgtgcatt gatatatcgc aagttttgtg tataggaaat gaactaatta ctgtgtcaat
    12541 cagtcccttt cttcatcgtt ataccctctt gcaaatccga ttaatctatc cttagttaag
    12601 gtgttttatg ttagcgattt ggcaaagttt taaacaaaat tatctaatca aatattggaa
    12661 tcctgttgca gcagtgatcg cagctggtat tatttcagct tattatttcg gcattactgg
    12721 cacttattgg gcggttacag gggaatttac ccgttggggc ggtcatctgt taaatgcttt
    12781 gggtgttgat gtttcgaact ggagctattt tcaactcatc ggcttagacg gcaccatctt
    12841 tacccgcatt gacggtgtga tgattctcgg tatgtttgcc ggctgtcttt ctgccgcatt
    12901 atgggcgaac aacgtcaaat ggcataatca gccacataaa aaacggatta tccaagcctt
    12961 gattggcggt gcgttagccg gtttcggagc ccgtttagca atgggctgta acctcgcctc
    13021 tctttttacc ggtattccgc aattctccgt ccacgcttgg tttttcacct ttgcgaccgc
    13081 catcggcact tactttgggg taaaagtgac tttattaccg atgtttagag tgaaattaga
    13141 gctgaaaaaa ggggcagcaa aaatcaaaga aaacgatccg aaacaagcta atcgccgttt
    13201 ttgggttggt atgctcattt ttatcactta tctttctgct tccctttatg taatgcaatc
    13261 ctcaatcaaa cttggttttg caatgctttg cggcttagcc tttggcttat tgattgaacg
    13321 agcccaaatt tgctttacct ccgctttccg tgacttatgg attaccggac gggcttatat
    13381 ggcaaaagca attattttcg gcattattgc cggcacaatc ggcgtgttct cttatattca
    13441 attaggtgtt tcacctaaaa ttttgtgggc tggcccaaat gccattatcg gcggattatt
    13501 attcggattt ggcattgtgc ttgccggcgg ctgtgaaacc ggctggatgt accgttcaat
    13561 ggaaggacag gttcatttta tgtgggtcgg cgtaggcaat gtagtcggtt caaccctgct
    13621 ggcttactac tgaggcgact tagctccggt gcttaccctt gattatgaaa aaatcaacct
    13681 actcaaagaa tttgggccgg ttggcggatt attcatcaat tatggcttat taattctttg
    13741 cttaatcgct gtagtttggt gggaaaaacg cttccttgcc aaagcgaaag caaaattagc
    13801 aactgcgtaa tctttttaac ttcaaccaac aagaggaaaa tgactatggc attcaccgtt
    13861 gtacaaaaac tagataaaga tccaaaagac atcacgcctg attacacctt agatacctta
    13921 ggcgaacctt gcccttaccc tgcgattacg atgttagaaa caatgccaca gctgcaaaaa
    13981 ggagagatat tggaactgtt aagcgattgt tcccaatcga ttaataatat tccgattgat
    14041 actaaaaatc acggctatac cctattaagc gtggaacaaa acggcactaa attacgctat
    14101 ttaattcagc gttaattgca aaaaattcgc acaaaacgac cgcttgtcgt aaaatagcaa
    14161 ctatttaaga gccttgtaac gcaaggctct tttattctaa gaggtaaaag aaaaatgaat
    14221 aaatacgctt tacttgcaat attttggttt attattggca tttatgcttt actttttcgt
    14281 gaaagcacta atgatatacc gccttttcca cattttgata aagtaagcca ttttgcctta
    14341 ttctttatcc agatctggtt atctgcaaac gcctttatcc gttcaaagaa agggatacct
    14401 tattttgggc taataatttt tgccttactc tatgctttca ccagcgaatg ggctcaggca
    14461 accttcacct caacccgaga aggttcttgg cttgatgggc tagcagatat gctaggagcc
    14521 tcactttcat tattgctggt aaaatattgc aaaaaataaa gcataaaaga ccgcttgtta
    14581 tatggtttag ccatactaca agcggtcatt ttttaccaaa attatgccat caactcatca
    14641 atcaattctt tcacactttt gattttgttg atttgtgaaa tgccattgcc caccgacaca
    14701 tagccattgt caaaatcccc ttctaacata cccaaacgca ttcctgtacc agcgttcatt
    14761 accttagcaa tctcactacg agttgcccca ttttcgctca tttcaaagca ttttttcgct
    14821 aatccagtcg gcagtgaacg gtagtaatgt ggttcggtac ggaataacag cagatcattg
    14881 gcatttgcct ccacaatcca gtttttcact ttttcgcttg cacggcattc ttcggtggcg
    14941 ataaatgccg tgccaatcca cacgccttca gccccaagcg ttaaggcagc ctgcaccgct
    15001 tttttatcgg caataccacc agccagcatt atcggcaaat ccaccttgcc cacaaattcc
    15061 gccagcacat taaaactgcc tacctctttc atcggcaaag taccgccctc atcaaaaccc
    15121 gtcagcacca aaatatctgc tcccaatgct tgggctttta aagcgtccgc caaattggga
    15181 ttaggcaaac ggcagatgat tttaatgcca gcagctttga atttggcgta aatctctggg
    15241 tcaagccagc cgttatccag caccacaggc acacgctctt caatgaataa atccaccatt
    15301 aacggaatca gcgaaaaatc ataagacaaa ataaatggta cgccaaaagg cttatcggtc
    15361 aatgccttaa ccttacgaat ctcgttacgc atacggtcaa gtacttcttc gttggaagtt
    15421 ggattggtgg tttgccctgc gtgtggggct aaaaaaccaa gcccaccagc ctcggcaacg
    15481 cttgctacca gatgagcgtc cgtcagccaa gacattggcg cttggacgat agggtgcttg
    15541 atatttaaga tttgggtaat gcggttcatt ggattttcct gtttgaataa aaagaattgg
    15601 acgtagttta atggttttgg atttgagagg gaatgcgtga aaatgggaag gtggttttcg
    15661 gatttggaaa attatcaatg ctaaaatact tgaaatacac acgccaatcc tcatatcaac
    15721 aaaattgaat atttaattat ggtaaaagaa aatgtctatt agatgggaaa acatcaagcc
    15781 cttacaaggt tctcaaaata gtgcttttga agagctagta tgccaattgg cacgccaaga
    15841 atttaaatct caaggaaaat ttactcgaat ttctgcacct gatggtggga ttgaagcaat
    15901 gtgtgaattg ccagatggtt ccgtatgtgg ttggcaagcc aaatattttt taagctcatt
    15961 ttcttcatca caatggcaac aaattgaaga ttcctttaaa gaatctttaa aaaactatcc
    16021 taaactaacc aaatactatg tttgtgtggc aaccgataga gcaaatgcca atgtatctgg
    16081 aaagaaatca tttcttacca aatgggagga gtatacccaa agatggaaag actttgctca
    16141 atcacaaggt cgtgaaatag aatttgaatt ttggggaagt tttgaattat ctgacttatt
    16201 atcaaaacct gaaaatgcag gcaaaaaatt cttttggttt aacgaaagcg aattatctga
    16261 caaatggttt gaacaataca atcaacaagc cattaataat cttggtgtgc gttatacacc
    16321 tgaaattaat gttgatttac ctattgcaat gcaattagaa agcttggcaa gaacccaaat
    16381 tttcaaaaaa catctgagtg atgaatttca taaattgtta gtagaaatta aatcacaata
    16441 caaatctctt tatcgttacg aagcgttgga aaatcatttt gaacctgtat atgaac
//
LOCUS       DANLXD010000057        16486 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.057, whole genome shotgun sequence.
ACCESSION   DANLXD010000057 DANLXD010000000
VERSION     DANLXD010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16486)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16486)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16486
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.057"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(164..1402)
                     /gene="pepT"
                     /locus_tag="PXD18_001518"
     CDS             complement(164..1402)
                     /gene="pepT"
                     /locus_tag="PXD18_001518"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HDL6301947.1"
                     /translation="MKQSLLNRLLRYTQIHTTSDPKSQTVPSSQQQWDLLHLLKTEVE
                     AMGLSEIYLDPNGYLFASLPANIDKTLPVLGLIAHVDTSPDFNGENVKPQVIEAYQGG
                     NILLNGSGDYLSPTDFPNLNKLIGDTLVTTDGTSLLGADDKSGIAIILSAIEYLQANP
                     HIPHGKIRIGFTTDEEIGRGADHFDVNAFGADVAFTFDGGPLGELQYENFNADAATVT
                     FFGRSVHPGTAKGKMINALERACEFQHRLPPHLTPATSEGREGFIMLHGIEGGIDKAE
                     IHYILRSFERDELAAFGKMLNDTLAEMQQIYGEHCGKVEIVEQYRNMREVLDDYGYLV
                     EIAENAMREQGIEPNLEPIRGGTDGSRLSFMGLPCPNLFTGGENFHGRFEFISVDTME
                     KATKVVIDICRKFADYDFNK"
     gene            complement(1422..1811)
                     /locus_tag="PXD18_001519"
     CDS             complement(1422..1811)
                     /locus_tag="PXD18_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HDL6301948.1"
                     /translation="MYMLDTNTVSYFFRGNANVVAKLKSINPERLCISSVTAAELVYG
                     VAKRNNGQLSQFLDYFLSSVKVLDWNYRCAELYGKLRAEMEKNGKVMGVQDQMIASHA
                     LAEECILVSSDQAFKMVPDLKLENWLH"
     gene            complement(1812..2072)
                     /locus_tag="PXD18_001520"
     CDS             complement(1812..2072)
                     /locus_tag="PXD18_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HDL6301949.1"
                     /translation="MEKIARLFRNGRNQAVRLPVEFEFDAEQVYVSKKENGDILLSLR
                     SRNTEHWQRLFELLPAVVCDETFLDTKERNQSFEQRDPFEVA"
     gene            complement(2188..2400)
                     /locus_tag="PXD18_001521"
     CDS             complement(2188..2400)
                     /locus_tag="PXD18_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HDL6301950.1"
                     /translation="MRDEYDFSNAVKNPYAKGLKSKSVVTIRIEDDVISYFKQLAEEV
                     NLPYQTLINLYLKDCVEQKRKPTISW"
     gene            complement(2401..2688)
                     /locus_tag="PXD18_001522"
     CDS             complement(2401..2688)
                     /locus_tag="PXD18_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HDL6301951.1"
                     /translation="MEEINGFEWDSEKALRNQQKHGVSFIEAVSVFYDNNAMLIPDPD
                     HSSREERFLLLGRSNKDNLLVVVHCERNTNIRIISARLATKRESGQYKGVH"
     gene            complement(2851..6384)
                     /gene="mfd"
                     /locus_tag="PXD18_001523"
     CDS             complement(2851..6384)
                     /gene="mfd"
                     /locus_tag="PXD18_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HDL6301952.1"
                     /translation="MSLISLNLPKSDGNFQDHQTLGNLVGHSDTLAISQAARAFYGLT
                     VVVTPDTRTALRLEKALPQFAGLPVQLFPDWETLPYDNFSPHQDIISARLSALFELQQ
                     GRQQILLLPINTLMQKVCPPNYLANNVLLIKKGDRFSIQKLRLQLENAGYRAVEQVLE
                     YGEYAVRGSILDLFPMGAEEPFRLDFFDDEIDSIRTFDVDNQRTKTEIAEINLLPAHE
                     FPTDSNGIEHFRAKFREKFGEIRREPEHIYQQVSKGILNAGIEYWQPLFFEEMASLFD
                     YFPAQTLFITFADIQQKAEQFHQDTQNRYESHRVDPMRPLLPPSDLWFAIDEVNRWLK
                     GYPRLTITSEKIRKSAAKMNANVANLPDIAIQSSAKEPFSAFQQFRQKFDGNILFSVE
                     SEGRRETLLDLLAPLGVKPKQVNSLDEAQGLPFSLIISPLDQGFVVETGGHGTRPYDD
                     ELNTNGENDNNYVGAGPVPARNLAIICETDLLGERVQTRREKNRKAVNPDTLIRNLAE
                     LKIGQAVVHLENGVGRYGGLTVLDAGGIKAEYLVLHYANDAKLYVPVASLHLISRYIG
                     GADETAPLHKLGSEAWAKTRQKAAEKIRDVAAELLDVYAKRESQTGFAFAYDKAEFDQ
                     FSATFPYEETDDQKIAINAVISDMCQAKAMDRLVCGDVGFGKTEVAIRATFLAVMNHK
                     QVVILAPTTLLAQQHYENFKDRFANYPVNVEVLSRFKTAKEQKTILQNVAEGKVDILV
                     GTHKLLQDDVAFRDLGLLVIDEEHRFGVRQKEKIKQLRANVDILTLTATPIPRTLNMA
                     LNGMRDLSIIASPPARRLLIKTFVRQSDEMVIREAILREILRGGQVYYLHNDVATIEN
                     CAEKLAELVPEARIVIGHGQMRERELERVMSDFYHQRFNLLVCSTIIETGIDVPTANT
                     IIIERADKFGLAQLHQLRGRVGRSHHQAYAYMLTPHPKTLTKDAEQRLEAMSTIDNLG
                     AGFALATHDLEIRGAGELLGSEQSGQIESIGFSLYMDLLENAVKALQEGREPSLDEIT
                     QHQAEIELRVPALLPDDYLPDVNMRLSFYKRIASSENLQSLNDLKVELIDRFGLLPEA
                     TKNLFAITQLRLSAQTLGIKKIDAGIHGGYLEFKPTAQPDPMKFIALIQKQPAVYSFE
                     GAVKFKFRLALEDNRKRLEFVENLLREVVGG"
     gene            6545..7762
                     /locus_tag="PXD18_001524"
     CDS             6545..7762
                     /locus_tag="PXD18_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine transporter"
                     /protein_id="HDL6301953.1"
                     /translation="MKNKILGSALMIAGTTIGAGMLAMPLTSAGMGFGATALLLVGLW
                     ALLAYTGLLFMEVYQTAPQKDVGVASLAEQYFGLIGRVLATFSLLVLLYALLAAYITG
                     GGSLLAGVMPEMADADMKLKISILIFTAVLGTFVVVGVKSVDGLTRVLFLGKIVAFIA
                     VLLMMLPKAKLENLTAIPLDNLLIISAIPIFFTAFGFHVIMGTINSYLDADIGKIRKS
                     IYIGTAIPLVAYLLWQLATHGVLSQNEFTTILTQDPTLNGLVKATSQITGSTILGEMV
                     RLFSVLALITSFLGVSMGIFEGVGDLLKRLNLPTNRLWLTIATFTPPILFALFYPNGF
                     IKALGYAGLLFAFYGMILPIGLAWKARRQYPNLPYRVIGGNLALVVALIAGIIIMVIP
                     FLIQAGYLPQAVG"
     gene            complement(7842..8348)
                     /gene="hutX"
                     /locus_tag="PXD18_001525"
     CDS             complement(7842..8348)
                     /gene="hutX"
                     /locus_tag="PXD18_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization cystosolic carrier protein
                     HutX"
                     /protein_id="HDL6301954.1"
                     /translation="MISIEQQTALRNELAENPGQILEMLAAKYQCTLEEVMLNLPAEM
                     LKVTEGERFAEVLQQIHEWDDAITLISHTEDTIIEFVGKLPSGSISRGFYNFEHKEGG
                     GLQGHLRYENCAKIYLLDRPFMGKRTVSLIFINKKGNAMFKIFVGREKIGGALKEHQI
                     KALYQLIG"
     gene            complement(8403..10481)
                     /locus_tag="PXD18_001526"
                     /pseudo
     CDS             complement(8403..10481)
                     /locus_tag="PXD18_001526"
                     /inference="COORDINATES: protein motif:HMM:TIGR01786.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
     gene            complement(10448..10831)
                     /locus_tag="PXD18_001527"
     CDS             complement(10448..10831)
                     /locus_tag="PXD18_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDL6301955.1"
                     /translation="MVFTSYSIKSKKLCPTILALSVSSILSSQATYAEETTAELSEVN
                     VVAKEDVKASIEKKNKEIIQQELIQNNRDLVRYSPDVGIVNQGRHQKGFAIRGVEDNR
                     VGISIDGVSLFLIQKKIPFINAMVI"
     gene            10986..11504
                     /gene="hutZ"
                     /locus_tag="PXD18_001528"
     CDS             10986..11504
                     /gene="hutZ"
                     /locus_tag="PXD18_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization protein HutZ"
                     /protein_id="HDL6301956.1"
                     /translation="MTTNRQEVLQNRLGPEIEELKQQIKTIMLATIDKDGVPNVSYAP
                     FVINNGEYQVLITTIARHARNLQEVPKVSLMLIEDESKSRQIFARRRLTFDATVRMIE
                     RTDEEWNNSIAALKARHGDLVDELSNMQDFKLFSFKPTAGLFVKGFGKAFDVGVDDLI
                     NVVHLDQGHQTA"
     gene            11654..14266
                     /gene="pepN"
                     /locus_tag="PXD18_001529"
     CDS             11654..14266
                     /gene="pepN"
                     /locus_tag="PXD18_001529"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HDL6301957.1"
                     /translation="MQPKAKLRKDYRAPDFTITDIYLDFQLDPDRTFVTSKLTVVRKN
                     PEATTLRLDGHSFDFLSLKYNGEPFSAFQKDDESLTLNLADVPAERFELEIETALNPA
                     QNTSLQGLYKSGDGFCTQCEAEGFRQITYMLDRPDVLAKYTTKITASKSKYPYLLSNG
                     NHIAQGDLHDGRHWVEWQDPFFKPSYLFALVAGDFDLLQDKFITKSGREVTLEIYVDR
                     GNLDRAPWAMESLKRSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKF
                     VLAKPETATDTDYLDIEAVIAHEYFHNWTGNRITCRDWFQLSLKEGLTVFRDQEFTSD
                     LWSRSAKRIEDVRLLRTVQFAEDASPMAHPIRPEKVIEMNNFYTVTVYEKGAEIIRMI
                     HTLLGEEKFQQGMQLYVARHDGSAATCEDFVKAMEDASGVNLEQFRRWYSQSGTPELT
                     ISDEYDETRKAYRLHISQMTPATHDQMDKLNLHIPLKVALYGEQDGKRIPLQYELLTV
                     SDVLDVTAEHQTFEFHNVTQRPVPALLCDFSAPVRLDYNYTTEQLLTLLKHAENDFVR
                     WDAAQMLYTNELRENLSRYQQHQPLSFSEGLVNALTFVLDNSASLPELTALTLTLPKE
                     TEFAESFKTIDPQGIAVVREFMQHSIAHALQDKLLAVYHQNQCGEYQVVAEDIAKRAL
                     RNACLSYLAFTDLGNALVHKHYNNADNMTDTLAALQAATKAQLSCRDALLADFEQKWK
                     HDGLVMDKWFMLQATRPDDDVLSIVQNLMEHPSFNFNNPNRLRSLVGAFCGQNPKAFH
                     AIDGSGYRFLVDTLIKLNESNPQVAARLIEPLIKLSRYDNQRQTLMRRGLERLRELDN
                     LARDLFEKIEKALD"
     gene            complement(14326..14598)
                     /locus_tag="PXD18_001530"
     CDS             complement(14326..14598)
                     /locus_tag="PXD18_001530"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HDL6301958.1"
                     /translation="MVAKLFSVYGRVQGVAFRFFTLQEANRLGIKGYVRNRDDGSVEV
                     VAEADEQTIAQLENWLQQGSPAAKVERVIVSDYLGSERFKRFEVRY"
     gene            complement(14652..16286)
                     /locus_tag="PXD18_001531"
     CDS             complement(14652..16286)
                     /locus_tag="PXD18_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005700110.1"
                     /note="is involved in the transport of the murein peptide
                     L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein OppA"
                     /protein_id="HDL6301959.1"
                     /translation="MQSKFSLSLLTTSLVLGLSANVFAAKVPEGTTLAEKQEITINNG
                     FEPSSFDPHKIEGVPESQVAYQLFEGLVTKDSDGNIQPGVAESWENTPDYKTWTFKLR
                     QDAKWSNGDAVTAHDFVFAWQRLVNPLTASPYSSYLTYLNVENAQDIIDGKKKPEELA
                     VKAIDDHTFQVQLSQPVPYAVELATHSSLLPVHKATVEKHGDAWVQKGNLVGNGAYTL
                     ADHVINEKIVFERNKNYWNDKETVINKATFLAIANAATDVSRYRAGDLDMTNYALPPE
                     QFATLKKEIPNEVFTARTLSTYYYEINHKRAPFDNVKVREALNLALDRTIITDKVLGQ
                     GQTPTYVFTPPYIHEGEKIQQPAYSKDSMADRKAKALKLLEEAGYSKANPLKFTILYN
                     TNDNHKKIAIAVSSLWKQGTDGIVDVKLENQEWKTFLDTRRNANYDVSRAGWSADYNQ
                     ATTFVNYFLSNSSNNTAFYKSQAYDDAVAESYKATDAAGRAAAYAKAEEQLAKDYAII
                     PIYNYVNPRLVKPYVKGYEGKDPQDDILLRNLYIVK"
BASE COUNT         4609 a         3674 c         3272 g         4931 t
ORIGIN      
        1 ttaaaaacgc tacgaacctc gtagagtctc aacaggtgca tattctatgg atttcagatt
       61 taatgtcaaa taaatttgta ggaaatctgt aaaaaatcgt ttaattggtg aaaaataacg
      121 ctttttgcaa atttttcatc aaatttgacc gcttgcagcc gccttatttg ttgaaatcat
      181 aatcagcaaa tttccgacaa atatcaatta caacttttgt ggctttttcc atcgtatcaa
      241 ccgaaataaa ctcaaatcgt ccgtggaaat tttcgccgcc ggtaaataaa ttcgggcaag
      301 gcaagcccat aaatgaaagg cgtgagccat cagtaccgcc acggatcggt tctaaattcg
      361 gctcaatgcc ttgttcacgc attgcgtttt cggcaatttc aaccaagtag ccgtaatcgt
      421 ccagcacttc acgcatattg cgatattgct cgacaatctc gacttttccg caatgttcgc
      481 cgtaaatctg ttgcatctct gccagcgtat cattcagcat tttgccgaat gcagctaatt
      541 catcacgctc aaagctacgt aaaatatagt gaatttccgc tttatcaatt ccaccctcaa
      601 tgccgtgcaa cataataaag ccttcacgcc cttcgctggt ggcaggggtt aaatggggag
      661 gcagacggtg ttggaactcg caagctcgct ctaaggcgtt gatcatcttg ccctttgccg
      721 tgccggggtg aacgctacgc ccgaagaacg taacggtcgc tgcatcggca ttgaaatttt
      781 catattgcaa ttcgcccaga ggcccgccat caaaggtaaa ggcgacatcg gcaccgaatg
      841 cgtttacatc aaaatgatct gcgcctcgac cgatctcttc atcggtggta aagccgatgc
      901 ggatcttgcc gtgcggaata tgcggattgg cttgtaaata ctcgatagcc gagagaataa
      961 tcgcaatgcc ggatttgtcg tctgcgccaa gcaaagaggt gccgtcagtg gtgactaagg
     1021 tgtcgccaat cagcttgttt aaattcggga aatccgttgg cgaaagataa tcgccactgc
     1081 cgtttagcaa aatattgccg ccttgataag cctcaatcac ctgtggtttc acgttttcac
     1141 cattaaaatc gggcgaagta tcaacgtggg caatcagccc aagcaccggc agggttttgt
     1201 caatattggc aggcaagctg gcgaacagat agccgttggg gtcaagataa atctcgctta
     1261 gccccatcgc ctctacttcc gttttcagca gatgaagcaa atcccactgc tgttgcgagc
     1321 ttggcacagt ttggcttttc ggatctgaag ttgtgtgaat ttgggtgtaa cgtagtaaac
     1381 ggttaagaag ggattgtttc attgtttttc cttactatag tttagtgtaa ccaattctcc
     1441 aatttcagat caggtaccat tttaaatgcc tgatcactag aaactaaaat acactcttca
     1501 gcaagagcgt gactagcaat catttgatcc tgcacgccca ttactttgcc atttttctcc
     1561 atctctgccc gtaactttcc ataaagttca gcacaacgat aattccaatc taaaaccttt
     1621 acactcgata aaaaataatc taaaaattga gaaagctgcc cattatttct tttcgccaca
     1681 ccataaacca attcagcagc agttacagat gaaatacaaa gcctctcagg attaatggac
     1741 ttcaatttcg ccaccacatt tgcatttcca cgaaaaaaat agcttacagt attcgtatct
     1801 aacatataca tttaagctac ctcaaaagga tcccgttgct caaaggattg gtttctctct
     1861 tttgtatcta aaaatgtttc atcacataca acagcaggca atagctcaaa caatcgttgc
     1921 caatgctcgg tatttctcga tctcaatgat aataaaatat cgccattttc ttttttagaa
     1981 acatagactt gctctgcatc aaactcaaat tcaaccggta aacgcactgc ttggttccgc
     2041 ccgttacgga ataatctcgc aattttttcc atcttacttt accctccgat agatagtgta
     2101 tatgccaaag tatatgccta ttttatacaa ctggcaagat aacccattct caaatactca
     2161 ataacatact gatttcaaat cataatatta ccaactaata gtcggtttac gtttctgctc
     2221 aacgcaatct ttcaaataaa gattgatcaa cgtttggtaa ggcaaattca cctcttcggc
     2281 aagttgttta aaatagctga taacatcgtc ttcaatccga atagtaacca cacttttgct
     2341 ttttagccct tttgcgtaag ggtttttcac tgcattagaa aaatcgtatt catctctcat
     2401 ttaatgtact cctttatatt gcccactttc gcgttttgtt gccaaacgtg ctgaaataat
     2461 ccgaatgttg gtatttctct cgcaatgcac aaccacaagt agattatctt tattgctacg
     2521 cccgagtagc aaaaaacgct cttccctaga tgagtgatct ggatccggga ttaacatcgc
     2581 attattatca taaaatacgc ttaccgcctc gataaaacta actccgtgtt tttgttgatt
     2641 acgaagagct ttctcactat cccattcaaa accattaatt tcttccattg ccagtttact
     2701 cctttttaat tgtaaataaa atatatttac atctattttt ttaagttata aacagcctag
     2761 atgaaattac tggattcgca ataaacaaaa acgattttta cgatacagat cgcaaaaatc
     2821 gtttttcaag attgacaacc ttaggaggct ttatccgccc acaacctccc ttagcaaatt
     2881 ttccacaaat tctaaccgct tgcggttgtc ttcgagtgct aagcggaatt tgaacttcac
     2941 cgccccttca aaactgtaca ccgctggttg tttttggatt aaggcgataa acttcattgg
     3001 gtcgggctgg gctgtcggtt taaattcaag ataaccgccg tgaatgccgg catcgatttt
     3061 cttaatcccg agcgtttgtg ccgacaagcg aagttgggtt atcgcaaaca ggtttttggt
     3121 tgcctctggg agcaagccga agcgatcgat cagctccact ttcaagtcgt tcaggctttg
     3181 cagattttcc gagcttgcga tccgcttgta gaacgacaga cgcatattca cgtcaggcag
     3241 ataatcgtcc ggcaataagg ccggtacacg caattcaatc tccgcttggt gttgggtgat
     3301 ttcatcgagg ctcggttctc gcccttcttg caaagctttg accgcatttt cgagcaagtc
     3361 catatagagc gaaaaaccga tgctttcaat ctgtccgctc tgctccgaac cgagcaattc
     3421 gcctgcacca cgaatttcta aatcgtgggt cgccaacgca aaaccggccc cgagattatc
     3481 aatggtactc atcgcctcca agcgttgctc ggcatctttg gtgagcgttt tcgggtgcgg
     3541 tgtgagcata taggcgtagg cttggtggtg cgagcgtccg acccgtccac gcagttggtg
     3601 cagttgtgcc agcccgaatt tgtccgcccg ttcgataata atggtattgg cagtcggcac
     3661 gtcaatcccc gtttcaataa tggtggagca aaccagcagg ttaaagcgtt gatgatagaa
     3721 atcgctcatc acccgctcca attcacgctc acgcatctgc ccgtgtccga tcacaattct
     3781 tgcctctggc acgagttcag ccaatttctc ggcacaattt tcaatggttg ccacatcgtt
     3841 atggaggtag taaacctgcc caccacgcag aatttcacgc aaaattgcct cacggattac
     3901 catttcatca ctttgtcgca caaaggtttt gattaaaagt cggcgagccg gcgggctggc
     3961 gataatcgag agatcacgca ttccgttgag tgccatattc agcgttcttg gaattggcgt
     4021 ggcggtgagg gtcagaatat ccacattggc acgcagttgt ttgattttct ctttttggcg
     4081 tacgccgaaa cggtgttctt catcaatcac taaaagccca agatcacgga acgctacatc
     4141 gtcttgcaac agtttgtgcg tgccgaccaa aatatccact ttgccctccg ccacattttg
     4201 caaaatcgtt ttctgctctt tggcggtttt aaagcgagac agcacttcca cattcacagg
     4261 gtaattggcg aaacggtctt tgaaattctc ataatgctgt tgggcgagca aggtagttgg
     4321 ggcaagaata accacctgtt tatggttcat cactgccaag aaagtcgctc gaatggccac
     4381 ttcggttttg ccgaagccga catcgccaca caccaatcta tccatcgctt tggcttggca
     4441 catatcgcta attacggcat tgatggcaat tttctgatcg tccgtttcct cataagggaa
     4501 agtggcacta aactgatcaa attccgcttt atcgtaggca aacgcaaaac cggtttggct
     4561 ttctcgtttg gcataaacat caagcaattc tgccgccaca tcacggattt tttccgctgc
     4621 tttttggcgg gttttcgccc acgcttcact gcctaattta tgtagcggcg cagtttcatc
     4681 cgccccaccg atataacggc tgattaaatg gagcgaggca accggcacat agagtttggc
     4741 atcgttagca taatgtagca cgagatattc ggctttgatc ccaccagcgt ccagcacggt
     4801 taagccaccg taacgcccca cgccgttttc caaatgcacc accgcctgtc cgattttgag
     4861 ttctgctaaa ttacggatta aggtatcagg attgacggct ttgcggtttt tctcacgccg
     4921 tgtttgcaca cgttcgccca gcaggtcggt ttcgcagatg atggcaaggt tgcgggcggg
     4981 cacaggaccc gcccctacgt agttattatc attttcgcca tttgtattta attcatcatc
     5041 gtagggacgg gtcccgtgcc cgcccgtttc caccacaaac ccttgatcaa gcggtgaaat
     5101 aatcagggaa aatggcaaac cttgtgcttc atctaatgaa ttgacctgct tcggcttcac
     5161 cccaagcgga gcaagcaaat ccagcaaggt ttctcttcgc ccttcgctct ccaccgaaaa
     5221 cagaatgttg ccgtcaaatt tttggcggaa ttgctggaaa gcagaaaacg gctctttggc
     5281 agaggattga atagcaatat ccggcaagtt agccacattt gcattcattt tcgctgctga
     5341 tttacggatt ttctccgaag ttatcgttaa acggggatag cctttcagcc agcgatttac
     5401 ctcatcaatc gcaaaccaga gatcactcgg cggcagtagc ggtcgcatcg gatccactcg
     5461 gtggctttca tagcggtttt gggtatcttg gtgaaattgt tcagcttttt gctgaatatc
     5521 ggcgaaagtg ataaacagcg tttgggcagg gaaatagtca aacagacttg ccatttcctc
     5581 aaaaaacaac ggctgccaat actcaatccc tgcatttaaa atgcctttgc tgacttgctg
     5641 ataaatatgc tccggctcac ggcggatttc accgaatttt tcacggaatt tggctctaaa
     5701 atgctcgatc ccgttgctat cagtcgggaa ctcgtgtgcc ggcagtaaat taatttcggc
     5761 aatttccgtt ttggtgcgtt ggttatccac atcaaaagtg cggatactgt cgatctcatc
     5821 atcgaaaaaa tcgaggcgaa acggctcttc tgctcccatc gggaataggt ctaaaatcga
     5881 gccacgcacg gcgtattcac catattccaa cacctgttcc accgcccgat agccggcatt
     5941 ttccagttgt aaccgcagtt tttgaatcga aaaacggtcg ccttttttaa tcaacagcac
     6001 attgttagcg agataattcg gcgggcagac cttctgcatt aaggtgttga tcggcaacag
     6061 caaaatctgc tgtcgccctt gttgcagttc aaacagggca gaaagtcggg cggagataat
     6121 gtcttggtgc ggcgaaaaat tgtcataagg caaggtttcc caatcgggga acagttgcac
     6181 tggcagccct gcaaactgag gcaaggcttt ttccaagcgt aacgccgtgc gggtgtcggg
     6241 tgtgacaacc accgtcaagc cgtaaaaggc tcgggcagct tggctgatcg caagggtatc
     6301 ggaatgcccg acaaggttac cgagggtttg atgatcttga aaattgccgt cagatttcgg
     6361 cagattaagt gaaattaaag acatacaagc ggtctgtttt aaataaaaaa ttgcaaattg
     6421 ttgcttagtt tactaaagca cggctgattg tgcaaaataa gcggagaaat tatgttatct
     6481 agatcgcatt gcgaaaaaat tctgataaaa tgttcccctt ttttaactct tactcacaca
     6541 tattatgaaa aataaaattt taggaagtgc attaatgatt gcaggcacta ccattggtgc
     6601 aggaatgctt gcaatgccac tcacctctgc aggaatgggt tttggggcaa ccgcattact
     6661 cttagtcgga ttatgggctt tattggccta caccggttta ttatttatgg aagtttatca
     6721 aaccgctccg caaaaagatg ttggagtggc aagccttgcc gagcaatact ttggcttaat
     6781 cgggcgtgta ttagccactt tcagtttgct cgtactactt tatgccctac ttgcggctta
     6841 tattaccggt ggtggttcac tgttagccgg tgtaatgcct gaaatggcag atgctgatat
     6901 gaaactgaaa atcagcattt taatcttcac tgcggtatta ggtacatttg tggtagtcgg
     6961 cgtgaaatcg gttgatggtt taacccgagt actgtttttg ggaaaaattg ttgcttttat
     7021 tgccgtgttg ctgatgatgc tgcctaaagc gaagctggaa aacttgacag caattccatt
     7081 agataactta ctcattattt ctgctatacc cattttcttc actgcgttcg gtttccacgt
     7141 tattatggga acaattaata gctatttaga cgcagatatc ggcaaaattc gtaaatctat
     7201 ttatatcggg acggcaattc cgctagtggc ttatttattg tggcagctcg ctacacacgg
     7261 ggtattaagc caaaatgaat tcaccacaat tttgacacaa gatccgacct taaacggctt
     7321 ggtgaaagcc actagccaga ttaccggtag tacgatttta ggcgaaatgg ttcgcttatt
     7381 ctcagtgctt gcattgatta cctcattttt aggggtttcg atgggaattt ttgaaggcgt
     7441 gggcgatttg ttaaaacgct taaatctacc gactaaccgt ttatggctga ccatcgccac
     7501 ctttacaccg ccaattctgt tcgctttatt ctatccgaac ggctttatta aggcattagg
     7561 ttacgccggt ttactctttg cgttctatgg tatgatttta cctatcggct tagcgtggaa
     7621 agcacgtcgc caatatccga atttacctta ccgtgtgatt ggtggtaatt tggcattagt
     7681 ggttgcgtta attgccggta ttatcattat ggtcattccg tttttaattc aggctggcta
     7741 tttaccgcaa gcggtaggct aatattgaaa agggctacga ttcaatatcg tagccctttc
     7801 tataagttac aagcggtcat ttttcgatga ctttttacag attagccaat caactgatac
     7861 agcgccttaa tttgatgctc ttttaatgcc ccgccaattt tctctctgcc gacaaaaatc
     7921 ttaaacattg cgttgccttt tttattaatg aaaatcagtg aaacagtacg ttttcccata
     7981 aaaggacgat ccaacaaata aattttggca caattttcgt agcgtagatg cccttgtaag
     8041 cctccgccct ctttatgttc gaaattgtaa aatccacgag aaattgaacc gcttgggagc
     8101 tttcccacaa actcaataat ggtatcttcc gtatgcgaaa tcagcgtaat cgcatcgtcc
     8161 cattcgtgga tttgctgtag cacttcggca aaacgttccc cttcggttac ttttagcatt
     8221 tcagccggta aattcagcat tacctcttcc agcgtgcatt gatattttgc cgctaacatt
     8281 tctaaaattt gccccggatt ttcggctaat tcattgcgta aggcggtttg ttgttcgatt
     8341 gatatcatta aatgttcctt taagtaaaga gagtttctta gctctctaag taaatttgta
     8401 aattagaaac ggtattcaaa attagccgag aagttacgtc caggttcata atagcgttgt
     8461 aatccaggat agccaccgta agttgcattt tcacgtactc caacagaatt aacgattcca
     8521 cctgttgtat ttaaaccacg taaagtatcc caagtatggt atttacggtt aaacaaatta
     8581 taaataccgg cacgtaatgt aatattctca gttggtttat agaaaccgta taaatccaca
     8641 acaaaggctt tagcatttaa gtgcttccag gtatctaaac ctgtctcgtg agaatattca
     8701 gtacaacgaa tgtcatattc atccccccaa taagggtaat acggatttgg cgttctatcc
     8761 tctttaaggc atttttccgg taatgttttt aaatattttg catctttcgc ctttttagcc
     8821 cccaagaatg tgaagcgaga aaatactccc catttacctt caggttgttc ataatctaag
     8881 ccaactacgg ctttaatcgg ctgaatagaa agtaaatctg ccccgttaga catactacct
     8941 ttgctgtaac cgaaggctcc aaatagcttc cagccttcag gtattggcat agctgaattt
     9001 aaattccatt taccactcac ttctagcccg tagattttcg cagaatcaat attttgcatt
     9061 tgctgtaccg ggcgccaaaa ctctctacca tatgcttggt aaacatccca ggtttcttgc
     9121 tcccataaaa aatctttata tttagtatgg tggaaattaa ctgagagcag cccaacattg
     9181 ccactacctt gcaaacttaa attttggctt aaactacgtt ccgcttttag gtttggattg
     9241 gacatccaag ctcctgcagc attatcacgg taatcaaaat acatttctga tgcatttgga
     9301 atacggaagc ctgtcccaat gttatatcct actttccatg cctcagtcag atgtttttct
     9361 aaaccggtaa cccaagttag ttgattaaat ttcgcattgt cagtttttac gcagttacga
     9421 caaacaagac cattgagttc ttgttgttca tacttcgccc aatcataacg aatgcctagc
     9481 gttgcaatcc aatcatgcgt taaatcaatc ttatcgtgca atgaaaaagt gtgctgtttc
     9541 gttttaattg ggtacatcat cgtagaatcg ggagaattta cccaaacacc ggataaataa
     9601 accgagtcct tatgtaatac atcgaaatct ctctctgcag tagaggcttt gaaagatagc
     9661 tgatgagtcc atttaccaaa ttctaatgct tggctgtcta aacggaaatt taagcgtttc
     9721 aattcagtat taaaaatacg aatattattg tcacttggtt ttctttgttt agcagggctc
     9781 cagtctgttg catcttcagc gcgtgtacct tcatagttat aagcagatgt ttcagtatct
     9841 tgataatctg catctatctt cgctagagat atccattttg actctgggaa atactcataa
     9901 aaaacattta ctgtatcacg tttactacgg tcttccgctt cacgccaaaa agaagtaata
     9961 gtaacggctg aatcttcgat aatataattt ttattatttt gcccactgta agaaacacca
    10021 acgcggtgat tatcattaaa tcgataagca aatttggcta aataattatg atgattatga
    10081 gtagaatcat caggagtttg tttactactg cgtaaagagc gagtttgtag agaatcttca
    10141 ggaagtgtat aacctcctgc acttttcatt tcatgcccat ggcgatttga ataaaccaat
    10201 atcgcctcag ctttctcacc taaatatcca acaccgaatg tattcaacca ttcattatta
    10261 cgagtaccat atcctgtgcg ataaaaagca ccaaatttat taccgttacg aacaatatca
    10321 taaggctcaa gcgtccgata attaactccg ccgcctaaat taccactacc ttgattgaaa
    10381 gaatctgcac ctttagatac ttcaatagta cgagctaatt ccggatctat agattggcga
    10441 gatgtattta aattaccata gcgtttataa agggaatttt cttctgaatc aggaaaagcg
    10501 agacaccatc aatacttatt cctacacggt tgtcttccac tccacgaata gcaaatcctt
    10561 tttgatgtct accttggtta acaatgccaa catcagggct ataacgaact aaatctcgat
    10621 tattttgaat caactcttgc tgaattatct ctttattttt cttttctata gaagccttca
    10681 catcttcttt agcaacaaca tttacttcag ataattccgc tgttgtttct tccgcatagg
    10741 tagcttgtga agacaaaatg ctactaacgc ttaaagccaa tatagtcggg cacaattttt
    10801 tagactttat tgaataagag gtaaacacca tgattctccc tagatagatt tttaatatac
    10861 tttattatta ataagatgta ttatcagtta catcacattt atagtcaata atgattctca
    10921 tatggattga aagttttcac tctttatagt aatctaaaaa aacactattt aaattgaggt
    10981 attttatgac aaccaaccgt caagaggtct tacaaaaccg tttaggtcca gaaattgaag
    11041 aattaaaaca acaaatcaaa actataatgc ttgcaaccat agataaagat ggtgtaccga
    11101 atgtgagcta tgcccctttt gtaattaata acggcgaata tcaagtctta atcactacta
    11161 ttgcccgtca cgctcgtaat ttacaagagg tgccaaaagt ctctttaatg ctaattgagg
    11221 atgaaagtaa gagccgtcaa atttttgccc gtcgtcgctt aacctttgac gcaacagtgc
    11281 gaatgattga acgtactgat gaggaatgga ataatagcat tgcagcactt aaagctcgtc
    11341 acggcgattt agttgatgaa ctgtcaaata tgcaagattt caagctcttt agctttaagc
    11401 caacggcagg cttatttgta aaaggatttg gtaaagcctt tgatgttggt gttgatgact
    11461 taattaatgt cgttcattta gaccaaggcc accaaactgc ctaattgcga aataaactca
    11521 cggctataaa taatcctatt tatagccgtt tttattgcga caagcggtca aattttttgg
    11581 aaaatttacc gctattttag tacaataacg acactattct atgagctaaa cgcaactaaa
    11641 aaaaggaaat cctatgcaac ctaaagcgaa actcagaaaa gattatcgag ctcccgattt
    11701 cactattact gatatttatc ttgacttcca acttgaccca gatcgcactt ttgtcacctc
    11761 aaaactaact gtcgtgcgta aaaatcctga ggcgacaaca cttcgtttag acggtcatag
    11821 tttcgatttc ctttcgctta aatataacgg cgagccgttt tccgcctttc aaaaagatga
    11881 tgaatcttta accttaaatt tagccgatgt gcctgccgag cggttcgagc ttgaaattga
    11941 aaccgcatta aatccggcac aaaacacctc gttacaaggt ttgtataaat cgggcgacgg
    12001 gttttgcacc cagtgtgagg ctgaaggttt ccgccagatt acctatatgc tcgaccgccc
    12061 tgatgtactt gcaaaatata cgacaaaaat caccgctagt aagagcaaat acccgtatct
    12121 gctttctaac ggcaaccaca ttgcccaagg cgacttgcac gatggcagac actgggtgga
    12181 atggcaagat ccgttcttta aaccaagcta tttatttgcc ttggttgcgg gggattttga
    12241 cttactccaa gataaattca tcaccaaaag cggacgtgaa gtcacgcttg aaatttatgt
    12301 cgatcgtgga aatttagacc gtgcaccttg ggcgatggag agcttaaaac gttcaatgaa
    12361 atgggatgaa gagcgtttcg gtttggaata cgatttagat atttatatga ttgttgccgt
    12421 tgatttcttc aatatgggag caatggaaaa caaagggtta aatattttca attccaaatt
    12481 tgtattggca aaaccggaaa ccgcaaccga tacggattat ttagatattg aagcggtgat
    12541 tgcccacgaa tacttccata attggacggg caaccgcatt acctgccgtg attggttcca
    12601 actaagctta aaagagggct taaccgtctt ccgtgatcag gaatttacct ccgatttatg
    12661 gtctcgttcg gcaaaacgga ttgaagatgt gcgtttactg cgtaccgtac aatttgccga
    12721 agatgccagc ccgatggctc acccgattcg cccggaaaaa gtgattgaaa tgaataattt
    12781 ctacaccgtg actgtgtatg aaaaaggggc ggaaattatt cgtatgattc acaccctgtt
    12841 aggcgaagaa aaattccagc aaggtatgca actttatgtg gcaagacacg atggttctgc
    12901 ggcaacttgt gaagatttcg ttaaagcaat ggaagatgct tcaggcgtta atcttgaaca
    12961 attccgccgt tggtatagcc aatccggcac gcctgagctc accatttccg atgaatatga
    13021 tgaaacccgc aaggcatacc gcttgcatat ttcacaaatg acaccggcaa cccacgatca
    13081 gatggataaa ctcaatctgc atattccgct taaagtagcg ttatatggtg aacaggacgg
    13141 taaacgcatt ccgttacaat atgaattatt gaccgtaagc gatgtgttag atgtaaccgc
    13201 agaacaccaa acctttgagt ttcataatgt aacacaacgc ccggtgcctg cattactgtg
    13261 tgatttctct gcaccggtac ggttagatta caactatacc accgagcagc ttttaacctt
    13321 actcaaacac gctgaaaatg attttgtacg ctgggatgca gctcaaatgc tctataccaa
    13381 tgaactgcgt gaaaatttaa gccgttatca gcaacatcaa ccactcagct tctcagaagg
    13441 gttggtgaat gccctaacgt tcgtgttgga taactcagca agcctgccgg aactaactgc
    13501 attaaccctc acattgccaa aagaaaccga gtttgcagaa tcgttcaaaa ccattgaccc
    13561 acaaggtatt gcggttgtgc gtgaatttat gcagcattcc attgctcacg ccttgcaaga
    13621 taagttatta gcggtatatc accaaaacca atgcggggaa tatcaagtcg tggctgaaga
    13681 tattgctaaa cgagccttgc gtaatgcttg cttaagctat ttagccttta ctgatttagg
    13741 caacgcgttg gtgcataagc attacaataa tgccgataat atgactgata cgcttgctgc
    13801 attacaagcc gcaaccaaag cccagctaag ttgccgtgat gcattattag ccgattttga
    13861 gcaaaaatgg aaacatgatg gtttagtgat ggataaatgg tttatgctac aagccacccg
    13921 accggacgac gatgtgttat ccatcgtgca aaatttaatg gaacacccaa gttttaactt
    13981 taataacccg aaccgtttac gttcattagt aggtgcattc tgcggtcaaa acccgaaagc
    14041 cttccacgcc attgacggtt caggctatcg tttcttggta gatacgctga ttaaacttaa
    14101 cgaaagtaac ccacaagttg ctgctcgact tattgagccg ttaattaaac tctcacgcta
    14161 cgataaccaa cgccaaacct tgatgcgtcg tggtctagaa cgcctgcgtg agctggataa
    14221 tttagcacga gatctgtttg agaaaattga aaaagcgtta gattaaacca agcaatacaa
    14281 gcggtgtcgt ttgcaaattt ttttacaaat gacaccgctt gttagttaat accttacctc
    14341 aaacctttta aacctttctg agccaagata atcgctcaca attacccgtt ccacctttgc
    14401 agcaggtgag ccttgttgta accaattttc cagttgagcg attgtctgtt catccgcttc
    14461 agctaccact tctaccgagc cgtcatcacg atttctgaca tagcctttta tgcctaatcg
    14521 attcgcttcc tgcaaggtaa aaaaccgaaa agcgacacct tgaacccgtc cgtaaaccga
    14581 gaataatttt gcgaccattc ttcccccata aaaataggct gcttattttt caataaacag
    14641 cccataatgt cttatttcac gatgtagagg ttacgcagta aaatatcatc ttgcggatct
    14701 ttaccctcat agcctttcac gtaaggtttc accaaacgtg ggtttacata gttataaatc
    14761 ggaataatcg cataatcttt ggctaactgc tcctctgctt ttgcataagc agctgcacga
    14821 ccagctgcgt ctgtcgcttt gtaagattct gctaccgcat catcataagc ttggctctta
    14881 taaaacgcag tattgttgct ggagttcgat aagaaatagt tcacaaaggt ggttgcttgg
    14941 ttatagtctg ccgaccaacc tgcacgagaa acatcataat ttgcattgcg gcgggtatct
    15001 aagaatgttt tccactcttg gttttctaat ttcacatcaa caatgccgtc tgtgccttgt
    15061 ttccataatg atgaaactgc aatcgcaatt ttcttgtggt tgtcgttggt attataaaga
    15121 atagtaaatt ttaacgggtt cgctttactg taaccggctt cttccaataa tttcaacgct
    15181 ttggcttttc tatctgccat tgaatctttg gaataagcag gttgctggat tttttcaccc
    15241 tcgtgaatat aaggcggtgt aaatacataa gttggtgttt gaccttgtcc tagcacttta
    15301 tcggtaataa tggtgcgatc taaagctaag tttaacgcct cacgcacttt cacattatca
    15361 aacggtgctc gtttatggtt aatttcatag taataagtag aaagggttct tgccgtaaac
    15421 acttcgtttg gaatctcttt tttcaaggtt gcaaactgct ccggtggaag agcatagttg
    15481 gtcatatcca aatcaccggc acggtaacgt gaaacatcag ttgcggcatt agcaatggct
    15541 aagaaagtcg ctttattaat cacggtttct ttatcattcc aataattttt attacgctca
    15601 aacacgattt tttcattaat aacgtgatcg gctaaggtat aagccccgtt tccaaccaga
    15661 ttgccttttt gcacccacgc atcgccgtgt ttctcaacgg ttgctttgtg tacaggtaat
    15721 aaagaagagt gtgttgccag ctcaactgca tacgggacag gttggcttaa ctgcacctgg
    15781 aaagtatgat catcaatcgc tttaactgct agttcctccg gttttttctt gccgtcaata
    15841 atatcttgag cattttctac attgagataa gttaaatagc ttgaataagg tgaagccgta
    15901 agtggattaa ccaaacgctg ccaagcaaat acgaaatcgt gagcagttac ggcatcaccg
    15961 tttgaccatt tagcgtcttg gcgtaatttg aacgtccacg ttttgtaatc cggtgtattt
    16021 tcccaacttt ctgccacacc cggctgaata ttgccgtcag aatctttcgt taccaatcct
    16081 tcaaataact gataagcaac ttgcgattcc ggcacgccct caattttatg tggatcaaaa
    16141 cttgatggct caaaaccatt attaatcgta atttcttgtt tttctgcaag cgttgttcct
    16201 tcaggcactt tggctgcaaa cacatttgcc gataagccta acactaatga ggttgttaat
    16261 aaggaaagcg agaattttga ctgcatattt gatctccatt gatgaatatt ggcttgcaac
    16321 cagccgattt gttctaatta atttttttaa gtctaggcat tattattttg attgcaagga
    16381 atttttttaa aaaatgtgat agatatcacc tttcaatgca aaaattgcat aaaaaaatcc
    16441 cgaagaaaat agctctataa actctgataa tggctagata acttgc
//
LOCUS       DANLXD010000058        16398 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.058, whole genome shotgun sequence.
ACCESSION   DANLXD010000058 DANLXD010000000
VERSION     DANLXD010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16398)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16398)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16398
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.058"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(41..2230)
                     /gene="yccS"
                     /locus_tag="PXD18_001532"
     CDS             complement(41..2230)
                     /gene="yccS"
                     /locus_tag="PXD18_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HDL6301960.1"
                     /translation="MNKFLRYLQHSWLSENVIKTLPMFISLNIAAVSIWQLGISDFAM
                     PLMLGIIAGGLVDLDNSLIGRAKNLIISLVAFSLSSIGASVSLHLGWLFVPVAVVCTF
                     LLVMLGAIGQRYSTIAFGTLIVAVYNSLAYTPEVLWYHNVVMILLGTLLYGLVGILVY
                     LIFPNRTVQENLASAYLALSHYLLAKSAYFDPDDDDLAAKQLALAKANSEVMAAFDKT
                     RVALFYRLSRQHKQQRTQRMLRYYFTAQDILERASSSHYQYHELFQQLSNSDLMFRFQ
                     RVLELQAAACQKIAMSLRHREVYEHGVRGEKALQGLLNSLNYHQERGLKSAYRWRAIA
                     ENLGNIERQLAQIEQGSSSGEHIEPLSKNFTKSHRLIAENITGLSNISQAIKAHLTFE
                     SQLFRHAVRLSIVVLLCSAIVPILGFDSKGYWILLTAIFVCQPNYTATKTRLIQRVIG
                     TIFGVLVGGSFELFNVALSLEAQLGLIVLTGSLYTFFRLVHYGFSTFYITVLVMISLD
                     IAGVSLESGILMRMLDTLLGTAIAWLAVAFLWPDWKYLNLQRNLHNGLKASGQYLRHI
                     IAQLQFGYNEQLPYRIARRDVHNHLSALSNAITNMYSEPQKYANDLTFAPKLLGIAYT
                     LLGYISTLGAYRIASREINQQVDFSAMFFSHAREVANIIGQIASESRSFAKLSEKLTA
                     IDQDLTQFEQENQQKQNDLALVLIQQLRLIVQLLPQLNSILQLKSVR"
     gene            complement(2274..2732)
                     /locus_tag="PXD18_001533"
     CDS             complement(2274..2732)
                     /locus_tag="PXD18_001533"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HDL6301961.1"
                     /translation="MKTTVRTIAKQKQIALVAHDSCKQDLIRWTQTHQAQLASHKLYA
                     TGTTGHLLARETGLEITSLLSGPMGGDQQLGGLIAEKKIDLLVFFWDPMNAAPHDPDV
                     KALMRIATVWNIPVAINETTANFLLNADLFNQAISVNVPDYDGYLAERLG"
     gene            2858..4132
                     /gene="thrC"
                     /locus_tag="PXD18_001534"
     CDS             2858..4132
                     /gene="thrC"
                     /locus_tag="PXD18_001534"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HDL6301962.1"
                     /translation="MNLYNIKHPEEQVNFAQAVRQGLGKNQGLFFPEVLPKLDSIDEL
                     LDLPLVKRSQKILSALIGEELPQETLNAMVKNAFTFPAPLAKVNDDIYALELFHGPTL
                     AFKDFGGRFMAQALANVRGDGKITILTATSGDTGAAVAHAFYGLENINVVILYPKGKI
                     SPLQEKLFCTLGGNIRTVAIESDFDACQALVKQAFDDAELRQAIGLNSANSINISRLL
                     AQICYYFEAVAQLPKEKRDNVVVSVPSGNFGNLTAGLIAKTLGLPIKRFIASTNANDT
                     VPRYLQSGKWEPNATVATLSNAMDVSRPNNWPRVEELFKRNGWSLSELGSAALNDAET
                     EAALKAQYAEGYLCEPHGAIAYQSLKDQLQQGETGIFLCTAHPAKFKESVEHILAIEL
                     PLPEALDKHNKLPLLSDEMAADFATLRAYLLK"
     gene            complement(4211..4945)
                     /locus_tag="PXD18_001535"
     CDS             complement(4211..4945)
                     /locus_tag="PXD18_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HDL6301963.1"
                     /translation="MSFKDMTGQKVPSVTFRTRQNDAWVDVTTDELFNNKTVVVFSLP
                     GAFTPTCSSTHLPRYNELACEFKALGVDDIICMSVNDTFVMNAWKADQESENITVIPD
                     GNGEFTEGMGLLVDKNDLGFGKRSWRYSMLVKNGIVEKMFIEPQEPGDPFKVSDADTM
                     IKYLSPNWTAKESVSIITKPGCLFCAKAKALLKEQGYTFEEIVLGRDASTISVRAITG
                     KTSVPQVFIGGKYIGGSDELAAYFAK"
     gene            5060..5944
                     /gene="oxyR"
                     /locus_tag="PXD18_001536"
     CDS             5060..5944
                     /gene="oxyR"
                     /locus_tag="PXD18_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator OxyR"
                     /protein_id="HDL6301964.1"
                     /translation="MNIRDLEYLIALAEHKHFRRAAESCNVSQPTLSGQIRKLEGELG
                     TILLERTSRKVLFTQAGLTLVEQAKVVLREVKILKEMASNQGKEMSGPLHVGVIPTLG
                     PYISPIIVPALKAEFADLELYIYELQTNQLLDQLESGQLDCGIISFVKESESFIEVPI
                     FNEEMYLVVPEQHEWAALKKFDMNLLKNRELLFLDSGHCLRTNTLDYCLSIGAKENPH
                     FKATNLETLRNMVAANVGLALIPKLAAKPIKGVHYIPLENPKPFRAVGMVYRPGSPLR
                     ARYERLAQAITKIMQSEA"
     gene            5947..6579
                     /gene="fabR"
                     /locus_tag="PXD18_001537"
     CDS             5947..6579
                     /gene="fabR"
                     /locus_tag="PXD18_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor FabR"
                     /protein_id="HDL6301965.1"
                     /translation="MANGMSVRAIQKEKTRRALVEAAFNQLSSEKNFSNLSLREVARE
                     AGVAPTSFYRHFKDMDELGLAMVDESGLLLRQLMRQARKRIANGGSVVVVSVETFFEL
                     IADRPNVFQLLLRESSGTSQAFRTAASREIQHFVAELADYIMSKDNHSNRELAYIQSE
                     GLVTLVFTAGSHALDMNNQEREKLKQRVIMQLRMLIRGSTYYANKQASST"
     gene            complement(6606..6905)
                     /locus_tag="PXD18_001538"
     CDS             complement(6606..6905)
                     /locus_tag="PXD18_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HDL6301966.1"
                     /translation="MKKADIQKMQDCYNQWVELLPELEKGIEQWKRASALLEPLSRFY
                     ASPEWRELHDSFDEQLDTKGNYSILSEDALWNALSEHHQLALEWLKLSTAYITKE"
     gene            complement(6994..10809)
                     /locus_tag="PXD18_001539"
     CDS             complement(6994..10809)
                     /locus_tag="PXD18_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HDL6301967.1"
                     /translation="MKGSGLATVGAPETGDNGQTIYTVDVAKAGAPTVTRGNVADAIN
                     NSEKTSSVVAGSKAVTVKAGKEDDKGNTEYTVDVATDKSIGRDNDGNMTVNTDNVTIV
                     KDPTTGEVKANTTTLNNSPEGKVTEPTGDDAKKLVTAGDIANAINNSGFNVTAGDGVD
                     GGETKGKKTQLIKPSETVTFDAGKNMTLTQADGKFTYTTKDNVAFNSIDMSNGKPDTT
                     GSITNLKSGVGGTFADKAAPTDAERKAIADNINNATGDTLNNAVNVGDVQAAMKAATT
                     KVEGDKGVTVTSKTNDDGSTTYTVEAKTDGTTIKVNDKGEITANTSELTNNPDGKVEE
                     PTEPNALVTAKTVADAINNAGFNIKANGDEKSLVKTGDTVQFLNGKNIEITRDGNNIT
                     VSTAKNVNFDSVQFGNEGPKITNNGGNINVGDKDGNAVKVTNVAAGDVNADSKDAVNG
                     SQLYTFAMASREEVKSTDKSVTVNTTKNADGANVFDLSVNTDDVTIVKDPTTGAIKAN
                     TTALNDANNDGRIDEPTADDAKKLVTAGDITNAINNSGFTLKTSAVEGGEKLSGGDEL
                     INPGKAVEMVAGKNLTVKQEADGKVIYATKDDVKFSSVTSNTVTVPTDEADPANNPIT
                     INKDGINAGNKAISNVASNLIPVTADDKVQPADNNPTNLADKLSNAATLGDVLNAGWN
                     LQGNGKAVDTVVHNDTVDFINGKGTTVTVENKDGKNTIKVDSPIEFVNQDPTDSSTPS
                     NTAKFTGEAPVQLGNVASSVRNEDGSTPEGKDRAEAIKNAEGDKLNNVVNLGDLQAAT
                     NAATTKVGGNRGVTITPSTNADGSTTYNVEAKTDGTTIKVDNEGNITANTSELGNNED
                     GTVKAPTQPNALLIAQTVADAVNNAGFNIKSAGNKAAGDQAATKLVKTGEEVVFEAGD
                     NLTVKRDGNQFTFATAKDVSFNSVQFSENGPKITNDGDNIKVGDKDGKPTKITNVADG
                     DISPVSTDVINGKQLNNYAKVNGNNIGTDEDGSINIVNGNGTTITSDKAGEVKVNVNI
                     TDLTVADNGKINVQDPNGTGSRFVNATTVANAVNNVSWNVDSKAVGTGAVEGDKAPAK
                     VKAGSTVSVNAGNNIKVTRKGSDVTVAVSDTPEFTSKTGDTLVNNNGVTINNGSAGKA
                     VSLTKDGLNNGGNRITNVKAGEADTDAVNVGQLKGAVNHLNNKIHRNNREARAGIAGS
                     NAAAALPQVYIPGKSMVAAAGGTFKGENALAVGYSRSSDNGKLILKLQGNANSRGDFG
                     GGVGVGYQW"
     gene            complement(10772..11257)
                     /locus_tag="PXD18_001540"
     CDS             complement(10772..11257)
                     /locus_tag="PXD18_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301968.1"
                     /translation="MDTGSITVDNTTGAVTTPAEEDKVATTKTVSEAIQKAGWNAKSG
                     GNKADGDQEAAELINPGEKVIFAAGDNLKVKRVGTIFTYETAKDVKFDSVTFGDNGPK
                     ITNKDGNVNIAGNDGNPTKITGVKAGEADTDAVNVSQLKQAAASQNRSERFRFSNCWC
                     T"
     gene            complement(11266..13425)
                     /locus_tag="PXD18_001541"
     CDS             complement(11266..13425)
                     /locus_tag="PXD18_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL6301969.1"
                     /translation="MGARATSANAIALGTDTAATGNRATAFGAGALATGNRSTVMGWR
                     SAASGTRSFAMGSGAMGDKSVANATYSLALGSSANANATSTATRGTAIGYNATVSGVN
                     ATALGVSAVSSNQSTVAIGDSAKASAGFAIALGSGANVALNNSVALGSNSTVSNAVAV
                     PSATVNGITYSGFAANTTAAGNVVSVGSNTIKRQIQNVAAGQISATSTDAINSSQLYM
                     AMNATGNLANSTKNILGGNATVKPDGSVTYTNIGGTNKNTIEEALKAVKTEVVAGSNV
                     NITNATGANGQTIYTVNAYNTTANSSSPDYITVTGKAATAANTTNYEIGLTKKAIDDF
                     TKDTQATVVSNDGTVTVKSTERNANGTVIYDLSVNIPAQASQIQYFSVNSTVPENQAN
                     DGAKSRNSIAIGPNATATGGEQAAVALGTNSNANGNGALSLGVATVSKGIQATAVGHS
                     ANATANGTTALGRQTNATAGDATAVGSNANATAEKASAFGVAANASANASLAVGANSI
                     ASAQSAVAVGTRANATAQFATALGMGAQATLNSSVALGSESVVRAATPTENATVGGIT
                     YNGFAGVNKDTNYVVSVGSAGKERQIQNVAAGQISATSTDAINGSQLYMAMNATSNLA
                     NSTANNFGGGSVVNPDGSVTQPKYNVTNAAGTQYGNTATNVGDAITNLNNYVNQGFNI
                     KDNAGETKGTVTPNESVQFVNGKGTVSNVTQEADGVK"
     gene            complement(13654..13854)
                     /locus_tag="PXD18_001542"
     CDS             complement(13654..13854)
                     /locus_tag="PXD18_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ESPR domain-containing protein"
                     /protein_id="HDL6301970.1"
                     /translation="MNQIFKVIWNQATQSWVAVSELQRAKGKTKSVSSASKATLALLA
                     GASAVLGANDAVAVVSYRFNNK"
     gene            14218..15372
                     /locus_tag="PXD18_001543"
     CDS             14218..15372
                     /locus_tag="PXD18_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDL6301971.1"
                     /translation="MNQFFPLIFSLTLFSGVTLALEKAPRTMPTEGINKPLLGQILFF
                     DNMLSHNGSQNCSSCHNPDYAFIDNRTTPAKGVVSQGDTPTKFGKRNSPTMLYAKYSP
                     EFHFDEQSQEYIGGQFWDGRAKNLAEQAGMPPIDPNEMGMPNKLEVAKRLYNVPMYQR
                     FLGQFYGEKVWESYESVYAAMEDAIATFQQENKLLAPFDSKYDLFLKGEVQLTALEEK
                     GRALFFNKAQTNCSSCHQLQSAANHQEETFSNYHYYNVGVPGNPDLIAVNGFAPDFVD
                     LGLFENPNVKGDETQKGKFKTPTLRNVAVTALYMHNGVFKELKTVLLFLDSYNNPERK
                     INPETGTAWQQAEFEPTIAHQKLKAKPLSDEEIDALEAFLKTLTDERYRK"
     gene            complement(15420..>16398)
                     /locus_tag="PXD18_001544"
     CDS             complement(15420..>16398)
                     /locus_tag="PXD18_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HDL6301972.1"
                     /translation="IIYNTEDGKSNVALLVVENEAWLTQNQLAELFDTSVQNISEHIK
                     NILKDKELDENSVIKDYLITAQDGKNYQVKHYSLEMILAIGFRVRSPRAVQFRKWANS
                     TLRTYLEKGFLIDSERLKNPQGRLDYFDELLEQIREIRASELRFYQKVRELFKLSSDY
                     DKTDKNTQMFFAETQNKLIYAITKHTAAELICQRADATKMNMGLTSWKGKVVRKGDIV
                     IAKNYLDNNELDSLNRLVMIFLESAELRVKNNQDLTLGFWRRNVDMLIEFNGFSVLGN
                     GGTITHKQMESFVREQYEKFDIQRKCLKQKEADWEDLQALEKLESELTR"
BASE COUNT         4653 a         3714 c         3022 g         5009 t
ORIGIN      
        1 tgtgaagcat gtcacatttt atgatttaat tataggctca ctaccttaca ctcttgagct
       61 gtaatatact atttaactgc ggtaataact gcacgatcag tctgagttgt tgtatcaaca
      121 ctaaggcgag gtcattttgc ttttgctgat tttcttgctc aaattgggtg aggtcttggt
      181 cgatagcggt caatttttcc gataattttg caaatgaacg gctctctgag gcaatttgcc
      241 cgatgatgtt tgccacctct ctggcgtgtg agaagaacat tgcggaaaaa tccacttgtt
      301 gattaatctc tcggctagca atacggtaag cccctaaggt ggaaatataa cccagcaagg
      361 tgtaagcaat acctaacaat tttggggcga aggttaaatc gttcgcatat ttttgtggtt
      421 cgctgtacat attggtaatc gcattactca gtgccgataa atggttatgc acatcacggc
      481 gggcaatacg gtaaggcagt tgctcgttat aaccaaactg caactgggcg ataatatggc
      541 gtaaatattg cccactggct ttcaagccgt tatgtaagtt acgttgtaaa tttaaatact
      601 tccaatccgg ccataagaat gccactgcca gccacgcaat cgctgtacct agtaaggtat
      661 caagcattcg cattaagatg ccgctttcaa ggctcacgcc tgcaatatca aggcttatca
      721 ttaccaacac agtgatataa aaggttgaaa agccataatg taccaagcgg aaaaaggtat
      781 aaagcgaacc ggtcagtacg attagcccaa gctgggcttc gaggctgagc gccacgttaa
      841 acagttcaaa agagccacca accagcacgc cgaaaattgt gccgatcaca cgctgaatca
      901 gtcgggtctt agtagcagtg taattcggtt ggcagacaaa aatggctgtg agtaaaatcc
      961 agtagccttt gctatcaaag cctaaaatcg gcacaatcgc actgcacaac agcaccacta
     1021 tcgacaaccg aacggcgtgt cgaaacagtt gggattcaaa ggttaaatgg gctttaattg
     1081 cttggctgat attgcttaag ccggtaatat tttcggcgat caagcggtga gattttgtga
     1141 aatttttact taacggttca atatgctcac cactgcttga gccttgttca atctgggcta
     1201 gttgccgctc aatattgcct aaattttctg caatagcacg ccagcgataa gcacttttca
     1261 agccccgttc ttgatgataa ttcaatgaat taagcaagcc ctgcaaggct ttttcgccac
     1321 gaacgccgtg ttcatatact tctctatggc gtaacgacat tgcaattttt tgacacgccg
     1381 cagcctgtaa ttccagcacc cgttgaaagc ggaacattaa atcactgtta cttaattgtt
     1441 ggaacagttc gtgatattga taatggctgg aacttgcccg ctctaaaata tcttgagcgg
     1501 tgaaatagta acgcaacatt cgctgtgtcc gttgctgctt gtgctggcgg cttaggcggt
     1561 agaatagggc aactctggtt ttatcaaagg cagccatcac ctcactattg gctttcgcca
     1621 aggctagttg tttggcagct aaatcgtcat catcagggtc aaaataggca gatttcgcca
     1681 gtaaataatg gctcaacgca aggtaggcgg acgctaaatt ctcctgcacg gttcgattcg
     1741 ggaaaatcag gtacaccaaa ataccgacca aaccatagag taaggtgcca agtaagatca
     1801 tcaccacatt gtgataccac aatacttcgg gcgtataagc caggctgtta taaaccgcca
     1861 caatcagcgt gccaaaagca atggtactat agcgttgccc gattgcccct aacattacca
     1921 gcaaaaaggt gcaaaccacc gccaccggca caaacagcca gcccaaatgg agcgacacac
     1981 tcgccccaat cgaggaaagc gagaacgcca ctaggctgat aatcagattt ttcgctcgtc
     2041 cgattaggct gttgtctaaa tccaccaaac cgccggcgat aatgcctaac atcaacggca
     2101 tcgcaaaatc agaaataccg agctgccaaa tgctgaccgc cgcaatgttt agcgaaataa
     2161 acatcggcag ggttttaatt acattttccg aaagccaact gtgttgtaga tatcttaaaa
     2221 atttattcat atttgctcat ttcgggcagg cacaggacct gcccctacct acactacccc
     2281 aaacgttctg ccaaatagcc atcataatcc ggcacattca cgctgattgc ttgattgaac
     2341 aaatccgcat ttaacagaaa attagcggtg gtttcgttaa tcgccaccgg aatattccaa
     2401 acggtcgcaa tccgcatcag ggctttcaca tcaggatcgt gcggagcggc attcatcgga
     2461 tcccaaaaga acaccagcag atcaattttc ttttctgcga tcagcccgcc taattgctga
     2521 tcgcccccca tcgggccgct taacaatgaa gtaatttcaa gccctgtttc tctggcgagc
     2581 aaatgcccgg tagtgccggt ggcatatagc ttatgcgagg caagttgggc ttgatgagtt
     2641 tgtgtccaac gaattaaatc ttgtttacag ctatcgtgag ccactaaggc aatctgtttt
     2701 tgttttgcga tggttctgac ggtggttttc atttttagct cctttgcaaa atttttcaca
     2761 aatcataccg cttatttttc gcttttgcat tgactaatca cggcttatgg ctaaaatcag
     2821 gtaaaaattc gcattttaaa acaaaggatt aaccgcaatg aacttataca acatcaaaca
     2881 ccctgaagaa caagtcaatt tcgcccaagc ggtacgccaa ggcttaggca aaaatcaagg
     2941 gctatttttc cctgaagtgt tacctaaatt agatagcatt gatgaattat tggatttacc
     3001 tttggttaaa cgcagccaaa aaattctttc agccttaatc ggcgaagagt taccgcaaga
     3061 aaccttaaat gcaatggtaa aaaatgcgtt cactttcccg gcaccgcttg ccaaagtcaa
     3121 tgatgatatt tatgcgttag aattatttca cggtccgact ttagccttca aagattttgg
     3181 tgggcgcttt atggctcaag ccttagccaa tgtacgagga gacggcaaaa ttactatttt
     3241 aaccgctacc tcaggtgaca ccggtgcggc ggtggctcat gctttctatg gtttggaaaa
     3301 tatcaacgtg gtcattcttt acccgaaagg caaaatcagc ccattacaag aaaaattatt
     3361 ctgtacctta ggcggtaata ttcgcactgt tgcgattgaa tccgactttg atgcttgcca
     3421 agccttagtg aaacaagcct ttgatgatgc cgagctacgc caagcgattg gtttaaattc
     3481 cgcaaattcc atcaacatta gccgtttact ggctcaaatt tgctactact ttgaagcagt
     3541 tgctcagtta ccaaaagaaa aacgagataa cgtagtggtt tcagtaccaa gcggtaattt
     3601 cggtaactta accgccggct taattgccaa aacattaggt ttaccgatta aacgttttat
     3661 tgcctcaacc aatgccaatg acaccgtgcc acgctattta caatcaggca aatgggaacc
     3721 aaacgcaacc gttgcaaccc tttctaatgc aatggacgta agccgcccga acaactggcc
     3781 acgagttgaa gaattattta aacgcaatgg ctggagtttg tctgaattgg gttctgccgc
     3841 attaaacgat gccgaaaccg aagcggcttt gaaagctcaa tatgcagaag gttatctgtg
     3901 tgagcctcac ggtgctattg cttaccaaag cttgaaagat cagctacaac aaggcgaaac
     3961 cggtattttc ttatgcaccg ctcacccggc aaaattcaaa gagtcggtgg aacacatttt
     4021 agcgattgaa ttgccgttac cggaagcatt agataagcac aacaaactgc cactgttatc
     4081 cgatgaaatg gcagcagatt ttgcaacatt gcgtgcatat ttgttgaaat aaatattcaa
     4141 taatagaaaa gggattaagt attaaactta atccctcttt ttatgcatta caagcggtta
     4201 tatttgccta ttattttgca aaataagcag ctaactcatc actaccgcca atatatttac
     4261 cgccgataaa tacttgtggc acagaggttt tacctgtaat tgctcgtaca gaaattgtgc
     4321 ttgcatcacg acctaacaca atctcctcaa aagtatagcc ttgctctttt aataatgctt
     4381 ttgcttttgc acagaacagg caacccggtt tagtgataat cgaaacagac tctttagctg
     4441 tccaatttgg acttaaatat ttaatcattg tatcggcatc tgatacttta aacggatcgc
     4501 ccggttcttg tggctcaata aacatttttt ccacaatacc gtttttcacc agcatcgaat
     4561 aacgccaaga acgtttacca aacccaaggt catttttatc aactaatagc cccatacctt
     4621 ctgtgaactc accattacca tcaggaataa cagtaatatt ttcagattct tgatctgctt
     4681 tccaagcgtt cattacaaag gtatcattaa ctgacataca gatgatatca tctaccccta
     4741 atgccttaaa ttcacaagct aattcattat agcgaggcaa atgtgttgat gaacaagtcg
     4801 gtgtaaatgc tccgggtaat gaaaacacaa ccaccgtttt gttattaaat aactcatcgg
     4861 ttgtgacatc aacccaagca tcgttttgac gtgtacgaaa tgttacactg ggtactttct
     4921 gacccgtcat atctttaaaa gacatattaa tgttctccta tagaattata tattacaaaa
     4981 atcttaggca ttatactcac aaatatggca taattcagcc tatcagaaca ataggaaaaa
     5041 tttaaattgg aggaatcaag tgaatattcg agatttagaa taccttattg cacttgcaga
     5101 acataagcat ttccgtcgtg cagcagaatc ttgtaatgtt agccaaccta ctttaagcgg
     5161 gcaaattcgc aaattagaag gcgaactagg cactattctg cttgaaagaa ccagtcgcaa
     5221 agtcctcttt acgcaagcag gcttaacatt agttgaacaa gccaaggtag ttttacgtga
     5281 agtaaaaatt ctaaaagaaa tggcaagcaa ccaaggtaaa gagatgtctg gcccgcttca
     5341 tgttggtgta atcccaacct tggggcctta catttcgcca attattgtgc ctgcattaaa
     5401 agcagaattt gcagatttag agctgtatat ttacgaatta caaaccaacc aattattaga
     5461 tcaacttgaa tccggccagc ttgattgtgg cattatctca tttgtaaaag agagtgaatc
     5521 ttttattgaa gtgcctatct ttaatgaaga aatgtacttg gtagttccag aacaacacga
     5581 atgggcagcg cttaaaaaat tcgatatgaa tttattaaaa aaccgtgagt tgctcttttt
     5641 agacagtggc cattgtttac gcactaatac gctagactat tgtctatcca ttggagcaaa
     5701 agaaaatcca cactttaaag ctaccaacct tgaaacctta cgcaatatgg tagcagcaaa
     5761 tgttggccta gcattgattc ctaaattagc cgctaaaccg attaaaggag tacattatat
     5821 tccacttgaa aacccgaaac cgtttcgagc tgtgggaatg gtgtatcgac caggttcacc
     5881 attacgcgcc cgctatgagc gtttagctca agccattact aaaattatgc aatccgaggc
     5941 gtaaaaatgg caaacggtat gagtgtgcgc gcaattcaga aagaaaaaac acgcagagca
     6001 ttagtagaag ccgcctttaa tcaattaagc tcagaaaaaa atttctctaa tctcagtttg
     6061 cgtgaagttg cacgtgaagc tggagtcgca ccgacttcgt tttaccgcca ctttaaagat
     6121 atggacgaac taggcttagc aatggtggac gaatccgggc tactattacg ccaattaatg
     6181 aggcaagctc gaaaacgaat tgcaaatggc ggaagtgttg tcgtggtttc agtggaaaca
     6241 ttcttcgaac tgattgccga ccgccctaac gttttccagc tattactacg cgaaagctcc
     6301 ggtacatcgc aagcgtttag aaccgcagca tcacgcgaaa ttcaacattt tgtagctgaa
     6361 ttggcggact atattatgag caaagataat cacagtaacc gagaacttgc ttatattcaa
     6421 tcggaaggtt tagtcacgct agtatttact gccggttctc atgctttgga tatgaacaat
     6481 caagaacggg aaaaactaaa gcaacgtgtc attatgcagc taagaatgct gattcgtggc
     6541 tccacctatt atgccaataa acaagcttca tcaacataaa aaaacagacg cctaagcgtc
     6601 tgtttttatt ctttcgtaat atatgcagtc gatagcttta accattctag tgctaattga
     6661 tgatgttcag ataacgcatt ccataacgca tcttctgaca agatactata attgccttta
     6721 gtatctaact gttcatcaaa actatcatgt aattcacgcc attccgggct agcataaaac
     6781 cgacttaagg gttccaaaag tgcagaagct cgtttccatt gctcaatccc cttttccaat
     6841 tctggtaata gctctaccca ttggttataa caatcctgca ttttctgaat atctgctttt
     6901 ttcattcttt accgcttaca ccataaattt tagcctcaat ataacataaa aatccccttc
     6961 cgaagaaggg gatttcaact caattaggct aaattaccac tggtatccaa cgcctacacc
     7021 gccaccaaag tcgcctcggc tattcgcatt accttgtaat ttcaagataa gcttaccgtt
     7081 atcacttgaa cgtgaataac ctactgcaag cgcgttttca cctttaaatg taccacctgc
     7141 tgcagccacc atagatttac ctggaatgta aacctgcggt aacgctgctg ctgcatttga
     7201 accggcaata ccagcacggg cttcacggtt attacgatgg atcttgttat ttaagtgatt
     7261 aacagcacct tttaactgac caacattaac agcatcggta tctgcctcac ctgctttaac
     7321 attagtaata cggttaccac cattatttaa gccatctttc gttaagctta ccgcttttcc
     7381 tgcagagcca ttattaatgg ttacgccatt attgttcacc aatgtatcac cagtcttgct
     7441 agtaaattca ggggtatctg aaacggctac agttacatca gaacctttac gtgtcacttt
     7501 gatattatta cctgcattca cgctcactgt actacctgct tttactttcg caggggcttt
     7561 atccccttca accgcacctg taccaactgc tttagaatct acgttccagc ttacgttgtt
     7621 tacggcattt gctactgttg ttgcattcac aaagcgtgaa ccggtaccgt taggatcttg
     7681 aacattgatt ttgccgttat cagcaacggt taaatctgtg atgtttacgt tcactttcac
     7741 ctcaccagcc ttatcactgg taatagttgt accattacca tttacgatat tgatagaacc
     7801 atcttcatca gtaccaatgt tattaccatt cactttcgca tagttgttca gctgtttacc
     7861 gttgataaca tctgtgctta ctgggctaat atcgccatct gctacattag tgatcttagt
     7921 tggtttaccg tctttatcac cgactttgat gttatcacca tcattagtga ttttcggacc
     7981 attctcactg aactgtacgc tattgaagct cacatctttt gctgtcgcaa aagtaaattg
     8041 attaccatca cgtttaacag ttaagttatc acctgcttca aacacaactt cttcgcccgt
     8101 tttcactagc ttagtcgcag cttggtcacc ggcagcctta ttacctgcag atttaatatt
     8161 aaagcctgca ttattcactg catctgcaac agtttgagca atcaataacg catttggctg
     8221 agttggtgct ttcaccgtac catcttcgtt gttacctaac tcactggtat ttgcagtgat
     8281 gttaccttca ttatctactt taatagtagt accgtcagtt ttcgcttcaa cgttataagt
     8341 agttgaacca tcagcattcg tgctaggtgt gatagttaca cctcggttac cgcccacttt
     8401 cgtagtagct gcattagttg ccgcttgtaa atcacctaag ttcactacgt tgtttagctt
     8461 gtcgccttca gcatttttaa tcgcttctgc acggtcttta ccctctgggg ttgagccatc
     8521 ttcgttacga acactacttg ccacattgcc taattgaaca ggggcttcac ctgtgaattt
     8581 agccgtattg cttggcgttg agctatcagt aggatcttgg tttacaaact caatcgggct
     8641 atctacttta atcgtattct taccgtcttt gttttcaacc gtgaccgttg tacctttacc
     8701 gttaataaaa tcaaccgtgt cattatgtac cacagtatca accgctttgc cgttaccttg
     8761 taaattccag cctgcattta atacatcacc taatgttgct gcattactta acttatcagc
     8821 taagttggtt ggattattgt ctgctggttg aaccttatca tctgcagtca caggtatcag
     8881 attagacgca acattgctaa tcgctttatt acctgcattg ataccatctt tattgatagt
     8941 aattggatta tttgcaggat ctgcttcatc agttggtaca gttacagtgt tagaggttac
     9001 gctgctaaac ttaacatcat ctttagtcgc ataaatgact ttaccatcag cttcttgctt
     9061 cacagttaag tttttacctg caaccatttc aactgcttta cccggattaa tcagttcatc
     9121 accacctgaa agcttctctc caccttctac agccgacgtt ttcaacgtaa agcctgagtt
     9181 attgatggcg ttggtaatat cacctgctgt cactaatttc ttagcatcat cagcggttgg
     9241 ttcatcaatt ctaccgtcat tatttgcatc atttaatgcc gtagtgttag ccttgatcgc
     9301 accggttgta ggatctttta caattgttac atcgtccgta ttcacagaaa gatcgaacac
     9361 attcgcgcca tcagcatttt ttgtcgtgtt aaccgtaact gatttatcag tcgacttcac
     9421 ttcttcacga gatgccatag cgaaagtata aagctgacta ccatttactg catctttact
     9481 atctgcattt acgtcaccgg cagctacatt agttactttg actgcattac cgtctttgtc
     9541 accaacattg atattaccac cattgttagt aatcttagga ccttcatttc cgaactgtac
     9601 actatcaaaa ttcacatttt ttgcagttga aacagtaatg ttattcccat cacgggtaat
     9661 ctcaatgttt ttaccattta agaactgaac cgtatcacct gttttcacca ggctcttctc
     9721 gtcaccgttt gctttaatgt taaaacctgc attgttaatt gcatctgcaa cggttttagc
     9781 tgttactaat gcatttggtt ctgtaggctc ttccacttta ccatcagggt tatttgttaa
     9841 ctcgctggtg tttgccgtga tttcgccctt atcgtttacc ttaatggttg taccatccgt
     9901 ttttgcttca acggtataag tggttgagcc gtcatcgtta gttttagatg ttacagtaac
     9961 acctttatca ccttccactt tggtggttgc tgctttcatt gctgcttgta catcacccac
    10021 attcacagca ttattcaacg tatcacctgt tgcgttgtta atattatccg caatcgcttt
    10081 acgctctgca tctgttggtg ctgctttatc tgcaaatgta ccacccacgc cgctcttcag
    10141 attagtgatt gagcctgttg tatctggttt accattgctc atatcaatgc tgttgaatgc
    10201 aacattatct ttcgttgtgt aagtgaattt accgtcagct tgggtaagtg tcatattttt
    10261 acccgcatca aaggtaactg tttcacttgg cttgattagc tgtgttttct tacctttggt
    10321 ttcaccacca tcaacaccat cacctgctgt tacattaaag cctgaattat tgattgcatt
    10381 agcaatatca cctgccgtca ctaatttctt agcatcgtca cctgtaggct cagtaacttt
    10441 accttcagga gaattattta atgttgtggt attcgcttta acttcgcctg ttgtcggatc
    10501 tttcacgata gtaacgttgt cagtattcac tgtcatatta ccgtcattat cacgaccgat
    10561 agatttatcc gttgcaacat ctaccgtata ttcagtattg cctttatcat cttcctttcc
    10621 ggctttaaca gttacggctt tagaaccagc tactacagat gaggttttct ctgaattatt
    10681 aattgcatca gccacattac cacgagttac tgtaggagca cctgctttcg ctacatctac
    10741 cgtatagatt gtttgaccat tatcacctgt ttcaggtgca ccaacagttg ctaaacctga
    10801 acctttcact tcggttttgt gacgctgctg cttgttttaa ctgacttaca ttcaccgcat
    10861 cagtatcagc ttcacctgct ttcacgcctg taattttggt tggattacca tcattacctg
    10921 caatattaac attaccatct ttattcgtga ttttcgggcc attatcacca aatgttacgc
    10981 tatcaaattt cacatctttc gctgtttcgt acgtgaatat agtgccaaca cgtttaactt
    11041 ttaagttatc gcctgctgca aaaatcactt tttcgcccgg attaatcaac tctgctgctt
    11101 cttgatcacc atcagcttta ttgccaccag attttgcatt ccaacctgct ttttgaatcg
    11161 cttcagaaac tgtttttgta gttgcaactt tatcttcttc tgcaggtgta gttactgcac
    11221 ctgttgtgtt atcaaccgtg atagaaccgg tatccacatc aaaggttact ttacgccatc
    11281 agcttcttgt gtaacatttg aaactgtacc tttaccgttt acaaattgta cagattcatt
    11341 tggggtcact gtgcctttgg tttcacccgc attatcttta atattgaaac cttggtttac
    11401 atagttattt aagttcgtaa ttgcatcgcc aacgtttgtt gcagtattac catactgagt
    11461 tccagctgca ttcgttacat tatatttagg ctgagtcaca gagccatccg gattcacaac
    11521 agaaccgcca ccaaaattat ttgcagttga atttgcaagg ttactggttg cattcattgc
    11581 catataaagt tgtgaaccat taatcgcatc ggttgatgta gcagaaatct gacccgctgc
    11641 cacattttgg atttgacgct ctttacctgc agagcctaca gaaacaacat agttagtatc
    11701 tttatttacc ccggcaaagc cattataagt aataccccct accgttgcat tttcagttgg
    11761 tgttgctgcc cttacgactg attcgctacc caaagcaaca gaactattca gagtagcttg
    11821 agctcccata cctaatgctg tagcaaattg agctgttgca ttagcacgtg taccaacagc
    11881 cactgctgat tgtgctgagg caattgaatt tgcacctacg gctaaagagg catttgcact
    11941 cgcatttgct gcaacaccaa aggcagaagc tttttcagcc gttgcattag cattagaacc
    12001 taccgctgta gcatcacctg ctgtcgcatt tgtttggcga ccaagtgcgg ttgtaccatt
    12061 agccgttgca tttgctgaat gaccaactgc cgtagcttga ataccttttg aaaccgtagc
    12121 aacacctaaa gataacgctc cgttaccatt tgcatttgag tttgtgccta atgctactgc
    12181 cgcttgctct ccacctgttg ccgttgcatt cgggccgatc gcaattgagt ttctgctctt
    12241 cgcgccatca ttagcttgat tctcaggtac ggttgaattc acagagaaat attgaatttg
    12301 gcttgcttgc gcaggaatat tgacagaaag atcataaata accgtgccat ttgcatttct
    12361 ctctgtactt tttacagtta ctgtaccatc gtttgaaaca acagtagctt gggtatcttt
    12421 cgtaaagtca tcaatggctt tcttagttaa accaatttca tagttagttg tattcgcagc
    12481 agttgcagct ttacctgtta cagtaatgta atcagggcta gaagaatttg ccgtggtgtt
    12541 atacgcattt actgtataaa tagtttgccc atttgcaccg gttgcatttg taatattaac
    12601 attgctacct gcaacaactt ctgtttttac cgcttttaat gcttcttcaa tcgtattttt
    12661 atttgttcca ccaatattag tataggtaac agaaccatca ggctttactg tagcattacc
    12721 acctaaaata tttttagttg aattagcaag gttacctgtt gcgttcattg ccatataaag
    12781 ctgtgaacta ttaattgcat cggttgatgt agcagaaatc tgacccgctg ccacattttg
    12841 gatttggcgt ttgatcgtgt ttgagccaac agaaacaaca ttccctgctg ccgtagtatt
    12901 agccgcaaag ccggaataag taataccatt taccgtcgca gaaggaactg ccacagcgtt
    12961 ggaaacggtt gaattactcc ctaaagcaac cgaattattt agcgctacat tagcacctga
    13021 gcctaaggca atagcaaaac cggcacttgc tttagcacta tcaccaattg caaccgtaga
    13081 ttggttggaa gatactgcac ttacccctaa agctgtcgca ttaacacctg aaactgtcgc
    13141 attataacca atcgctgtac ctctagttgc agtagaagtt gcattagcat tagcacttga
    13201 acctaaagct aaagaataag tagcatttgc aacagactta tcccccattg cacctgaacc
    13261 cattgcaaat gaacgagtgc cactagcggc agatctccat cccattactg ttgaacggtt
    13321 accagtagct agagctcctg caccaaaagc tgttgcacgg ttacctgttg cagcagtatc
    13381 cgtacctaat gcaatagcat ttgctgaagt cgctctagcc cccataccaa tagcaataga
    13441 aggaactaat gcccaattct gaccagtgtt attgagactc tctacaccaa tattatagta
    13501 atgtaagaag tatcttctgg atccactaaa tttgttctat gcgttgcatt cgtatctgta
    13561 ccaattgcaa tagtagatct gccagttgag attgaatccg caccaatagc aattgcgttc
    13621 tccgatgatg cagttgcttg tgttgaaata taattacttg ttgttgaacc tataagatac
    13681 aacagccaca gcatcattag ctcccaacac ggcactagct ccagccaata aagccaatgt
    13741 tgccttactt gcagaactaa cagatttcgt tttacctttc gctcgttgta attcagatac
    13801 tgcaacccaa ctttgtgttg cctgattcca aataacttta aaaatttgat tcataatcga
    13861 ccctatataa aaataaaaaa gattacgtag aacctatgtt caacataatc ttcaccaata
    13921 taaaaaaccg ccacctattt aagtgaaata acttacttat agactcagaa atttaagtgc
    13981 gcgtatttta cgctatttgt aatataattc atcttctgga gtgtaaattt attgtaaata
    14041 atacgaggaa tctaaccgct tgttataacg caaaacacct tgacttaaat caagccacta
    14101 cctcattttg aggggagatt tatacgcagt gaaattttaa aataagctaa ggtttacgga
    14161 taatcgttca acactattga attatcactg tagttatcgt taaaaaggta tgcttttatg
    14221 aaccaattct tccctctaat ctttagctta actctatttt ccggcgtaac tttggcacta
    14281 gaaaaagcac ctcgaactat gccgacagaa ggaataaata agcccctact tggacaaatt
    14341 ctattctttg acaatatgct gtcacacaac ggttcacaaa actgctccag ctgccataat
    14401 ccggattatg cctttattga taaccgcact actccggcaa aaggggtggt ttcacaagga
    14461 gatactccaa ccaaattcgg caaacgcaac tccccgacca tgctttatgc gaaatactcg
    14521 cctgagttcc actttgatga gcaaagtcaa gaatatatcg gcgggcagtt ctgggacgga
    14581 cgagccaaaa atctcgccga gcaagccggt atgccgccta tcgacccaaa tgaaatggga
    14641 atgcctaaca aattagaagt agccaaaaga ttatataatg tgccgatgta tcagcgattt
    14701 ttagggcaat tttacggtga aaaggtatgg gaaagttatg aaagcgttta tgcggcaatg
    14761 gaagatgcga ttgcgacatt ccaacaagaa aacaaacttc tcgctccatt tgattcaaaa
    14821 tatgatctat ttttaaaagg cgaggtacaa ttaactgcat tggaagaaaa aggcagagct
    14881 ttatttttca ataaagctca aactaattgt agtagttgcc accaattaca gagtgctgca
    14941 aaccaccaag aagaaacctt tagcaactat cactattaca atgtaggcgt acccggtaac
    15001 ccagacttga tagcggttaa cggcttcgca ccagacttcg tcgatttagg cttatttgaa
    15061 aacccaaatg ttaaaggtga tgaaacacaa aaaggcaaat tcaaaacccc aacattgcgt
    15121 aatgttgccg tgactgcact ttatatgcac aacggtgtgt ttaaagaatt aaagactgtt
    15181 ttgctgtttt tagacagcta caataacccg gagcgaaaaa tcaaccctga aaccggcacg
    15241 gcgtggcaac aagcagaatt tgaacccact atcgcccacc aaaaactcaa agccaaaccc
    15301 ttaagcgatg aagaaattga tgccctcgaa gcatttttaa aaaccttgac ggatgagcgg
    15361 tatagaaaat aaggctacaa gcggtaaaat tttggggaaa ttttaccgct tgcgtttaac
    15421 taccgtgtta gctcactttc taacttttcc aatgcctgca aatcttccca atctgcctct
    15481 ttctgtttta aacatttacg ctgaatatca aatttttcgt attgctctct gacaaagctt
    15541 tccatttgtt tatgcgtgat tgttccacca tttcctaata cagaaaagcc gttaaactca
    15601 atcaacatat ctacatttct tcgccagaaa cctaacgtaa gatcttggtt gttcttcaca
    15661 cgtaattcgg cactttcaag aaagatcatt accaagcgat ttaaagaatc cagctcatta
    15721 ttatctaaat agtttttcgc aatcacaata tcgcctttac gcacgacttt tcctttccag
    15781 ctagttaatc ccatattcat cttagtcgca tcagcacgtt gacaaatcaa ctcagcggca
    15841 gtgtgtttgg ttattgcata aatgagctta ttttgcgttt ctgcaaaaaa catttgcgta
    15901 tttttatctg ttttgtcgta atcgctagag agtttgaaaa gctctcgtac tttttgatag
    15961 aaacgcaatt cacttgcccg aatctcacga atctgttcaa gtaattcatc gaaataatct
    16021 aaacgaccct gcggattttt caaacgctcg ctatcaatta aaaaaccttt ttcgagataa
    16081 gtgcgtaatg tgctgtttgc ccattttcta aactgtactg ctcttgggct acgaactcga
    16141 aaccctatcg ccagaatcat ttcaagtgaa taatgtttta cttgataatt cttgccatct
    16201 tgagcagtta tcaagtaatc cttgataact gaattctcat ctaactcttt gtcttttaag
    16261 atatttttaa tgtgttcgga tatattttgc acagaggtgt caaaaagttc tgcaagttga
    16321 ttttgtgtca gccaagcttc attttcaacc actaacaagg ctacattgct tttgccgtct
    16381 tccgtattat aaataatt
//
LOCUS       DANLXD010000059        15730 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.059, whole genome shotgun sequence.
ACCESSION   DANLXD010000059 DANLXD010000000
VERSION     DANLXD010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15730)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15730)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15730
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.059"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(52..1092)
                     /locus_tag="PXD18_001545"
     CDS             complement(52..1092)
                     /locus_tag="PXD18_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL6301973.1"
                     /translation="MQTTLSPQQIAKKHRTIEKKRSFLLLFFLLICLLSLIFDIMTGP
                     SLLPFNEVWKALFQLGEIEETTKVIVYELRLPMAIMALVVGAALGVGGAEIQTLLNNP
                     MASPYTLGLAAAAGFGASIVIAFGGFGLPTEISVPVGAFVMTLFSSAILFAFSSLGRF
                     SSAILVLVGIALLFLFQSLLSLVQFISAPEVSQQILFWLFGNLTKATWQTISIAFGVT
                     TVCILLLFKDAWKLTALRLGEARALSLGINLTWLRMKTLLIVSVMTATCISFVGIIGF
                     IGLVAPHIARMLLGEDQRFFLPGSMLVGAAFLSMSSVLSKSLVPGALFPVGIITALVG
                     VQFFFWIVLAKR"
     gene            complement(1181..1771)
                     /locus_tag="PXD18_001546"
     CDS             complement(1181..1771)
                     /locus_tag="PXD18_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein phosphodiesterase"
                     /protein_id="HDL6301974.1"
                     /translation="MNFLTHSLISLEIDTQTKQQTLYGNFAGDFYKGLIPHLNLADNL
                     KSGVVLHRSIDKISDRPDSLTTQLLQGTFGRYKGIVSDIMIDHFLAKHFQRLFAKDLN
                     EVQAQIFQQIEQQRTIFPEQFVPMFNWLQSRKALTHYADLDFLEQVFLGMSSRVKKGE
                     ILRNAVTEIWQNYTLLEEAAIQEFFTVKDRATRELS"
     gene            complement(1772..3145)
                     /gene="modF"
                     /locus_tag="PXD18_001547"
     CDS             complement(1772..3145)
                     /gene="modF"
                     /locus_tag="PXD18_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter ATP-binding protein
                     ModF"
                     /protein_id="HDL6301975.1"
                     /translation="MVVDGNGSGKTTFSLALQGKISLYSGDYGNSFQHIQLLSFEQQQ
                     KMLEQIFKDRNNDSVSPDDFGLTARQVILNGSPKEALCEEYAHKLHIQHLLERPFMHL
                     STGESRKVLFCQMLVSEPDLFILDEPFEGLDQQSVQYWQQLIAELQSKMALVLIVNRF
                     NDIPDAANHIELLDNLSLILQGERAEIEQQAVYSQLKFAEENVNVPLPDSAAPLLSLP
                     ENINPFELENVNIQYGEKKILDNLSWTVQPKQHWWIKGPNGAGKSTLLSIITGDHPQS
                     YANKVRLFGKQRGSGETIWDIKKNIGYVSSQLHMDYRVNCSAMEVILSGFFDSIGVYQ
                     QVPNALQLKAMEWLERLNLSNVAKKPFRSLSWGQQRLLLITRAMVKHPSILILDEPLQ
                     GLDGINRKLVKQFIEQLVTNSQTQLLFVSHQDSDAPNCITHLFEFVPKGETNEFGFEY
                     HQTALGA"
     gene            complement(3263..4216)
                     /gene="fmt"
                     /locus_tag="PXD18_001548"
     CDS             complement(3263..4216)
                     /gene="fmt"
                     /locus_tag="PXD18_001548"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDL6301976.1"
                     /translation="MSKLNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAGRGK
                     KLQASPVKQLAEAHNIPVYQPKSLRKEEAQAELKALNADVMVVVAYGLILPEAVLNAP
                     KYGCLNVHGSLLPRWRGAAPIQRSIWAGDTETGVTIMLMDVGLDTGDMLHKVTTPIEP
                     NETSASLYAKLAELAPLALLEVLNGLANHTFKAEKQDEALSNYAEKLSKEEAKLDWQL
                     PAVQLERNIRAFNPWPFSFLTLTVDGVEQSIKIHQATVLPHQEKAAGTVINVDKTGIQ
                     IATQQGVLNITQLQPAGKKPMSVQDFLNGRADWFVSGTQLS"
     gene            4331..4942
                     /locus_tag="PXD18_001549"
     CDS             4331..4942
                     /locus_tag="PXD18_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HDL6301977.1"
                     /translation="MEFFIPKADTIFEEEIKKSRFITYLRHTEGMEQAKAFWQELKIQ
                     HPHARHWCWATVAGLPNDSQQYGFSDDGEPSGTAGKPMLNYLLGSGLGEITAVVVRYY
                     GGIQLGTGGLVKAYGNGVQQALLQLERIRKVLRKNYRLQCEYEQFNTISHLISEKDIV
                     IVEQLFSDKVDLLLAFNPSEVEAFADELTQRFSGKLALIKEEI"
     gene            4946..6430
                     /locus_tag="PXD18_001550"
     CDS             4946..6430
                     /locus_tag="PXD18_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter"
                     /protein_id="HDL6301978.1"
                     /translation="MQFFSIIRIVGILVMCFSFTMLVPATVALIYGDGGGRAFLEAFA
                     LNFMVGTLLWWLCRDNKNELRSREGFLIVVLFWVVLGLLGAVPFIILENPDLNVAESI
                     FESFSGLTTTGATVITGLDSLPKAILFYRQFLQWLGGMGIIVLAVAIIPLLGIGGMQL
                     YRAEMPGPLKEQKMRPRIAETAKALWLIYLSLTILCAVAFWLAGMTVFDAISHSFSTV
                     SIGGFSTHDASIGYFNNAAISYITVFFLLLSACNFALHFAVIDRIRDAQSRKKGGILS
                     RLYWGDYEFRFFLMVQLGLFLVCTLVLVGYGYFDNTSVTIEQALFQSVSISTTAGFTT
                     NDFSQWSSFLPTLLVLSSFIGGCAGSTGGGLKVIRVLLLYLQSKREIHRYIHPNVIQP
                     IKLGNHVLSERVVDGIWAFFSAYFFVFVICWLATIACGMETFDALNAVIASLNNLGPA
                     LGSVSSNFTQVPDSAKLVLTFAMVCGRLEVFTLLVILSPVFWKD"
     gene            6431..6958
                     /gene="hemG"
                     /locus_tag="PXD18_001551"
     CDS             6431..6958
                     /gene="hemG"
                     /locus_tag="PXD18_001551"
                     /EC_number="1.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone-dependent protoporphyrinogen IX
                     dehydrogenase"
                     /protein_id="HDL6301979.1"
                     /translation="MKTLILYFTTDGQTKKIAERLADVITHEVELISLKDQAVDFAEK
                     IANADQIVIGASIRYGHFNPLVYQFVEQHYPALNAKKTAFYGVNLTARKDNRNTPETN
                     TYVRKFLAKVKWKPTHIEVIAGALLYLRYKPFDRLMIRFIMKITKGETDTSKEYEYTD
                     WQQVENFGKLLANQL"
     gene            7090..7485
                     /gene="mscL"
                     /locus_tag="PXD18_001552"
     CDS             7090..7485
                     /gene="mscL"
                     /locus_tag="PXD18_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HDL6301980.1"
                     /translation="MSILKEFREFAVKGNVVDMAVGVIIGGAFGKIVSSLVSDVVMPP
                     IGWLIGGVDFKDLAIEIAPAKEGAEAVMLKYGAFIQNVFDFLIIALAVFGMVKVINSL
                     KKAPVVEEAPAEPTAEEKLLTEIRDLLKK"
     gene            complement(7598..7861)
                     /gene="rpsT"
                     /locus_tag="PXD18_001553"
     CDS             complement(7598..7861)
                     /gene="rpsT"
                     /locus_tag="PXD18_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HDL6301981.1"
                     /translation="MANIKSAKKRAVQSEKRRQHNASQRSMMRTFIKKVYAAVAAGDK
                     AAAQTAFVEMQKVVDRMASKNLIHANKAANHKSKLAAQIKKLA"
     gene            8125..9699
                     /gene="murJ"
                     /locus_tag="PXD18_001554"
     CDS             8125..9699
                     /gene="murJ"
                     /locus_tag="PXD18_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HDL6301982.1"
                     /translation="MSKKLLRSGMIVSFMTLISRILGLIRDIVVATILGTGVSADIFL
                     FANRIPNFLRRLFAEGAFSKAFVPVLAEYNADNDPNKTREFIAKVSGTLGGLVTVVTL
                     VAMIASPVVAALFGTGWFLDWLYDGPNAEKFTQASFLLKITFPYLWFITFVALSGAVL
                     NTIGKFGVMAFSPVLLNVAIIAVALWGRDYFDSPDIALAWGVFLGGLLQFLFQIPFMK
                     KEGLLVKPKWAWKDEGVTKVRKLMIPALFGVSVTQLNLLLNQVIASFLITGSISWMYY
                     ADRLIEFPLGLFGIAISTVVLPSLSRIAKNKELTEIQRGEHFQNTMDWGVRMVLLLGI
                     PAMIGMAVLAQPIIMTMFMRGKFGFEDVLATSYPLWVMCLGLNSYMLISVLANGFYAN
                     QNTKTPVKVGIIAALSNICFGLAFAPFLGYIGLALASACSALVNVSLLYVNLSKNGYY
                     KVSHKTVLFVLKLFIAACVMGALVAYFTPEIELWALMTMWQKVYWLIWLMILAGGSYF
                     ASILVLGIRKKDFRSA"
     gene            9701..10168
                     /locus_tag="PXD18_001555"
     CDS             9701..10168
                     /locus_tag="PXD18_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HDL6301983.1"
                     /translation="MKSLKLKIPPPAWFLLCAALMWLVAQYVPVSLPNYQHTAIFFSG
                     LAVAIIGGAVAVSALWVIHQAKTTYSPFRPQHTAKLVTWGIYRKSRNPMYLSLLLGLI
                     AWALWLGAMLAWLVLPLFVWLITYFQIKPEEQILAQKFGTHYAKYCNQVRRWL"
     gene            complement(10233..12242)
                     /locus_tag="PXD18_001556"
     CDS             complement(10233..12242)
                     /locus_tag="PXD18_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDL6301984.1"
                     /translation="MDLIKKLNTGSTFRVPIFLPSLLFVSFVAVFCIIFPQQAQTSLD
                     TIKNSLFQHFSWFYIFAGSIFFLFLIFLSFSRLGDIKLGADTDEPEFGFGSWIAMLFA
                     AGMGIGLMYFGVAEPILHYLKPVQQNLTEPERMKEAMMTTFYHWGIHAWAIYGVIALA
                     LAYFGFRYKLALTIRSGFYPLLKHRISGFWGHLIDIIALCSTIFGLTTTLGFGVMQVS
                     AGFNNLGLIEQSNFTVLAIIVTVAMALAVLSAVSGVGKGVKILSEINLTLAGLLLIFV
                     IITGPTLLLFSSFTENLGYYFSSLLEMSFRTFAYEPEHQGWLSGWTVLYWAWWASWAP
                     FVGLFIAKISKGRTIREFILGVLFVPSLFNILWMTSFGSSAIWFDQQTAGALAEVSGN
                     TEQLLFTFFEQLPFGSIASFVAVIVISIFFITSADSGIFVLNSIASQGEENAPKWQSV
                     LWGALLAILALSLLYSGGLASLQTMTLIIALPFTFIMLILCIGLWKGLMVDNQYFNKK
                     FSQGSQHWAGKDWKQRLEKIINPSNKQDVRHFFIKVARPAFLELIEEFESYGLIAKMN
                     FTNEQNPKLEFEVVKENLRNFIYGIESVPRELSDLVVGDDNLPNIEQNTIYEPITYFL
                     DGRKGYDVQYMTKEELIADVLQQYERFINLAMDNSHDLMTADFNH"
     gene            12434..12969
                     /locus_tag="PXD18_001557"
                     /pseudo
     CDS             12434..12969
                     /locus_tag="PXD18_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251153.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            12997..13608
                     /locus_tag="PXD18_001558"
     CDS             12997..13608
                     /locus_tag="PXD18_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6301985.1"
                     /translation="MKYEAKPLIISPNHIQQRLHGKLLARALLIIALLMLAKFIYIAS
                     LSNYFTFYLMEKFQLNIAMAQLSLFTFLGAVALGAFVGGPIGDKIGRNAVIWFSFLGM
                     APFALLLPHADLFWTIVCAIFAGFIMSSAFSAMVVYAQEAVPGRVGLISGTMFGLMFG
                     IGGLSAAVLGFFADEYGLESIFKACAYLPLLGFAALGLPKRNI"
     gene            complement(13619..14509)
                     /gene="rarD"
                     /locus_tag="PXD18_001559"
     CDS             complement(13619..14509)
                     /gene="rarD"
                     /locus_tag="PXD18_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDL6301986.1"
                     /translation="MNISGKLQGWHYALLCYLTWGTFPIYWYPINQSGMPAEQILAQR
                     VLWSALFAVFLLLIFQQGRAVINAFKQPKVLGLFVLSSFMIGVNWLVYLWAIVNEHIL
                     DASLGYFINPIFNVFVGRLILKEQLNKAQLLALLFAISGILWLAIPAGQIPWVALILA
                     ASFCIYGLIRKLAPMEPLSGLALETLLMSPFAITYLCFCYHQNILVFSELNPLQMAVL
                     LCSGIATTLPLLWFAMGARRISMSLLGMLQYISPTLQFLCGVLIFNETLSAERAVGYI
                     LVWIGVGVFLLGMKKAGVKR"
     gene            complement(14591..15574)
                     /gene="epmA"
                     /locus_tag="PXD18_001560"
     CDS             complement(14591..15574)
                     /gene="epmA"
                     /locus_tag="PXD18_001560"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HDL6301987.1"
                     /translation="MNNLQLDNIDWQPTASIPHLIQRSKIITEIRKFFTDRGLLEVET
                     PILSEFSVTDVHLSTFNTQFQSPFSPEAKTLHLMTSPEYHMKRLLAAGSGPIFQLCKV
                     FRNEEAGKRHNPEFTMLEWYRPHFDMYRLINEVDDLLQQILDCEPAESFSYQFVFQTY
                     VGLDPLSATKAQLVEKARKHGLQCDDDEQRDTLLQFLFSEVVEANIGQERPTAVYHFP
                     STQAALAQISSEDHRVAERFEFYYKGLELCNGFHELDDADEQIHRFEQDNLQREKMGL
                     EPQQLDVRFLAALKAGFPNCSGVALGVDRLLMLAMDAEKIEEVISFGIEKA"
BASE COUNT         4411 a         3149 c         3479 g         4691 t
ORIGIN      
        1 taagtttcca cgcttaatag ttacatcgtt taagttgagc atagaaaatc cttatcgttt
       61 cgccaataca atccagaaaa agaactgcac accgactaat gccgtaataa taccgaccgg
      121 aaataatgcg cccggcacaa ggctttttga tagcacggat gacatcgata aaaatgccgc
      181 acccactaac attgaaccgg gcaggaaaaa gcgttggtct tcgcctagca acattcgggc
      241 aatatgcggg gcaactaagc caataaagcc gataatgcct acaaagctaa tgcaggtggc
      301 cgtcattaca gacacaatca gcaatgtttt cattcgtaac caagttaagt taatgcctaa
      361 gctcaatgct cgagcttcgc ccaaacgcaa ggcagttaat ttccacgcat ctttgaataa
      421 taataaaata cagactgtag ttacgccaaa ggcaattgag atagtctgcc aagtagcttt
      481 agttaaatta ccgaatagcc aaaacagaat ttgttgggat acctcaggtg cagaaataaa
      541 ttgcaccaat gacagtaaag actgaaataa aaacaataag gcaattccta ccagcactaa
      601 tattgccgag ctaaaacgtc ctaaagagga aaaggcaaat aaaatggcgg aagaaaatag
      661 tgtcatcaca aaagccccga caggtacaga aatttcggtg ggtaaaccaa atccaccaaa
      721 ggcaatcaca atcgaagcac caaagccggc tgcagctgct aaacccaatg tataagggct
      781 tgccattgga ttattaagca aagtttgaat ttcagctccg ccaacaccaa gtgctgctcc
      841 aaccaccaat gccattattg ccattggtaa gcgtagctca tagacaatca ctttggtggt
      901 ttcttcaatt tcgcctaatt ggaataaggc tttccaaact tcattaaacg gaagcaggga
      961 agggcctgtc ataatatcga aaatgaggct gagtaaacaa atgagtaaga aaaagagtaa
     1021 taaaaaactg cgtttctttt caatagttcg gtgcttttta gctatttgtt ggggagagag
     1081 cgttgtttgc ataaaaatgt aatgtttgag aattattatc agacaggata agagaaaaga
     1141 tcgataaatt caagaatatc caagataccg actaaagtat tcaactaagt tctcgagtag
     1201 ccctgtcttt tacagtaaaa aactcctgaa tagcggcttc ttctaaaaga gtataattct
     1261 gccaaatttc ggttacagca tttcttaaaa tctcaccttt cttaactctt gatgacattc
     1321 ccaagaatac ctgttctaag aaatctaaat cggcataatg agttaatgct tttcgtgact
     1381 gtaaccagtt aaacatcggc acaaattgtt caggaaaaat cgtgcgttgt tgttcgattt
     1441 gctgaaagat ctgtgcttgt acctcattta aatctttagc aaataaccgt tggaaatgtt
     1501 tagcgagaaa atggtcgatc ataatatccg acacaatgcc tttataacgc ccgaatgtgc
     1561 cttggagtaa ttgggttgtg aggctgtccg gtcggtccga aatcttatca atcgagcggt
     1621 gtaacaccac accgcttttt aagttatccg ctaaattgag atgcggaatt aaacctttat
     1681 agaaatcacc ggcaaagttg ccatataggg tctgttgctt ggtttgggtg tcaatttcaa
     1741 gtgaaatcag cgaatgggta agaaaattca tttatgctcc aagtgcagtt tggtgatact
     1801 caaacccaaa ctcgttggtt tcgcctttcg gtacaaactc aaataaatgc gtaatgcaat
     1861 ttggagcatc gctgtcttgg tgcgaaacaa aaagtagttg cgtttggctg ttagtcacta
     1921 attgttcaat gaactgtttg actaatttgc ggttaatgcc gtctaaacct tgtaacggtt
     1981 cgtctagaat cagaattgat gggtgtttca ccattgctcg ggtaatcaaa agtaagcgtt
     2041 gttgccccca cgagagagag cgaaacggct ttttggcaac attgcttaaa ttgaggcgtt
     2101 ccaaccattc cattgctttt aattgcaagg cattcggcac ttgttgatac acgccgatgc
     2161 tgtcaaaaaa gccagaaaga atgacctcca ttgcggagca atttacccga taatccatat
     2221 gcaactggct gctgacatag ccgatatttt tcttaatatc ccaaatggtt tcgccacttc
     2281 cccgttgttt gccaaatagt cggactttat tggcataaga ttgtgggtga tcgccggtga
     2341 taatcgaaag caaggtcgat ttcccagctc cattcgggcc tttaatccac cagtgttgtt
     2401 taggctgaac cgtccaactt aggttatcta aaatcttctt ctccccatat tgaatattca
     2461 cattttccaa ctcaaacgga ttgatgtttt ccggcaggct gagtagcgga gctgcactat
     2521 caggcagtgg cacattgaca ttctcttctg caaattttag ctgagaatag accgcttgtt
     2581 gttcaatttc tgctcgctct ccttgcagaa ttaatgataa attatctaat aactcaatat
     2641 gattggcagc atcaggaata tcgttaaaac gatttacaat cagcactaac gccattttgc
     2701 tttgtagttc ggcaatcagt tgttgccaat attgcaccga ctgctgatcc agcccttcaa
     2761 acggttcgtc taaaatgaat aaatccggct cgctcactaa catttggcaa aatagcactt
     2821 tgcggctttc accggtggaa aggtgcataa acgggcgttc aagcagatgt tgaatatgca
     2881 atttgtgggc atattcctca cataacgcct cttttggact gccatttaaa attacttgtc
     2941 gtgcggttaa gccgaaatca tcgggcgaga cactatcgtt gttccgatct ttgaaaatct
     3001 gctccaacat tttttgttgt tgctcgaaag agaggagctg aatatgttgg aacgaattac
     3061 catagtcgcc ggaatagagc gagattttac cctgtaaagc gagtgaaaaa gttgttttgc
     3121 ctgaaccgtt tccgtctacg accacctaaa agtcattggg ttggatctgt aaggcgtcaa
     3181 tcgtgagttt atgttgttta accagtgaaa atcgggcatt ggttattgta agtgaaggct
     3241 gtgtttgcat atatttcccg ttttaactta gttgtgtccc gctgacgaac caatccgctc
     3301 gaccgtttaa gaaatcttgc accgacattg gttttttacc cgccggttga agttgggtaa
     3361 tattcagcac gccctgttgg gtggcaattt gaatcccggt tttatccaca ttaattaccg
     3421 tgccggctgc tttttcttgg tgaggtaaca ccgtggcttg gtgaattttg atactttgct
     3481 caacgccatc aacggttaag gttaaaaaac taaacggcca agggttaaaa gctcggatat
     3541 tgcgttccag ttgaactgct gggagttgcc aatccaattt agcttcttct ttggaaagtt
     3601 tctcggcgta attggacagt gcttcatctt gtttttccgc tttgaatgtg tggttggcta
     3661 aaccgtttaa cacctcaagc aatgccagag gggcaagttc tgccagtttg gcatacaagg
     3721 aggcggaggt ttcattcggc tcaatcgggg ttgtgacttt atgtaacata tcaccggtgt
     3781 ctaagccaac gtccattagc ataatggtta cgccggtttc tgtatcacct gcccaaatcg
     3841 aacgctgaat cggagctgct ccacgccagc gaggtagtag cgaaccgtgt acgtttaggc
     3901 aaccatattt aggagcattc aatactgctt caggtagaat taagccgtaa gctaccacca
     3961 ccatcacatc ggcatttagg gctttcagtt cagcttgagc ctcttcctta cgcagggatt
     4021 tgggttggta aacaggaatg ttgtgagctt cggccagctg ttttaccggg ctggcttgca
     4081 gttttttgcc tcgcccggca ggtttatccg gctgagtata aaccgcaatc acgttatgct
     4141 cggaatctaa taaggcttgt aaatgttgag cggcaaaatc aggcgtgccg gcaaaaataa
     4201 tattgagttt tgacatattt tttattcgtt caagttatca atgaaagact tattaaacca
     4261 ttaaacagca caaataaaaa gtggcttgaa tatggtatca ttgccacatt caagataaga
     4321 gaatcaaaca atggaatttt ttatccccaa agcggataca atttttgaag aagagattaa
     4381 aaaaagccga tttatcacct accttcgcca tactgagggt atggagcagg ccaaggcatt
     4441 ttggcaggag ctgaaaattc agcatccgca cgcacgccat tggtgttggg caacggtggc
     4501 aggcttgccg aatgattcgc aacaatacgg cttttcggat gatggagaac cgtctggtac
     4561 agcaggtaag ccaatgctca attatttgct tgggtcaggc ttgggggaaa ttacagcggt
     4621 ggtggttcgc tactacggtg gtatccagct tggcaccggc ggcttggtga aagcctatgg
     4681 caatggggtg caacaggcgt tattgcagtt ggagcggatt cgcaaagttt tgcgaaaaaa
     4741 ctaccgcttg caatgtgaat atgagcagtt taataccatt tctcatctca ttagcgagaa
     4801 agatattgtg attgtcgagc aactttttag cgataaagtg gatttgttgc tggcatttaa
     4861 cccgagcgag gttgaggcct ttgcagatga attaacccaa cgcttttcgg gcaagctcgc
     4921 attaataaaa gaagaaatct agtctatgca atttttttcc attattcgta ttgttggcat
     4981 tttggtgatg tgtttttcat tcacaatgct tgtgccggca acggtcgccc taatttatgg
     5041 cgatggcggt gggcgggcgt ttttagaagc cttcgctctg aattttatgg tcggtacgct
     5101 gctttggtgg ctgtgccgtg acaacaaaaa cgagctacgt tcccgtgagg gctttttgat
     5161 tgtagtactg ttttgggtgg tgctgggttt gctcggggct gtgcctttta ttattttgga
     5221 aaaccccgat ttaaacgtgg cggaatccat ttttgaatcc ttttccggct taactacaac
     5281 gggtgcaacc gtcatcaccg gcttagatag cttgcccaaa gcgattttat tctaccgcca
     5341 atttttgcaa tggctagggg gaatggggat cattgtgtta gcggttgcga ttattccgct
     5401 gttaggcatt ggtggaatgc aactttatcg tgcggaaatg cccggaccgc tcaaagagca
     5461 gaaaatgcga cctcgcattg cggaaacggc aaaagcgttg tggctgattt atctcagcct
     5521 gacgattctg tgtgcggtcg cattttggct cgccggaatg acggtgtttg atgccatttc
     5581 gcatagcttt tccacggttt cgattggcgg attttctacc cacgatgcca gcatcggcta
     5641 ttttaataat gcggcaatta gctatattac cgtgtttttc ctgctacttt ctgcctgcaa
     5701 ctttgcattg cattttgcgg tgattgatcg catacgagat gcacaatcac gcaaaaaagg
     5761 gggtatttta agccgcttgt attggggcga ttacgagttt cgttttttct tgatggtgca
     5821 gttagggctt ttcttggttt gtaccttggt gttagtgggt tacggttatt tcgataatac
     5881 ctctgttacg attgagcaag cgttgtttca atcggtgtcc atttccacca cggccggctt
     5941 tactaccaat gattttagcc aatggagttc gtttttaccc acgctgttgg tgctgtcttc
     6001 atttatcggt ggttgtgccg gctcaaccgg tggcggcttg aaagtgattc gggtgttgct
     6061 gctttattta caaagtaaac gtgaaatcca ccgctacatt caccccaatg tgattcaacc
     6121 gattaaatta ggcaaccacg ttttatcgga acgggtggtt gatggtattt gggcgttttt
     6181 ctcggcgtac tttttcgtgt tcgtgatctg ctggcttgct accatcgctt gtggaatgga
     6241 aacctttgat gctctaaatg cggtaattgc ctcactaaat aatctaggtc ctgcattagg
     6301 gagcgtgagc agcaatttca cccaagtgcc ggacagtgcc aagttagtgc tgacttttgc
     6361 aatggtatgc ggacgtctgg aagtgtttac cttgctggtg attttaagcc ctgttttttg
     6421 gaaagattaa atgaaaacct taattctcta ttttacgacc gatggtcaaa ccaaaaaaat
     6481 tgccgaacga ttggcggacg tgattactca cgaagtcgag ctgatttcgc taaaagatca
     6541 agcggtcgat tttgccgaaa aaattgcaaa tgccgaccaa attgtcatcg gtgcttcaat
     6601 tcgctatggg cattttaacc cgttggttta tcagtttgtg gaacagcatt atccggcatt
     6661 aaacgccaag aaaactgcct tttacggtgt gaatttgacc gctcgcaaag ataatcgaaa
     6721 cacgcctgaa accaatactt atgtgcgtaa atttttagct aaagtgaaat ggaaaccaac
     6781 ccacattgag gtaattgctg gggcattact ttacctacgc tataagccat tcgaccgatt
     6841 gatgattcgc tttattatga aaattaccaa aggcgaaacc gatacctcca aagaatatga
     6901 gtacaccgat tggcagcagg tggagaattt tggcaaatta ttagccaatc agttataatc
     6961 aaactgatct aaatcaaaaa aatgtaaatt tatttaaatg ttgtagaaat tttaaagatt
     7021 ttgattataa tcgccagccc acgttcttgc gaagaccgtg tttaatcatt gaatgaaagg
     7081 aaagccccct tgagtatttt aaaagagttc cgtgaatttg cggtaaaagg taatgttgtt
     7141 gatatggctg tcggtgtgat tatcggcggt gcattcggta aaattgtttc ttcattagtt
     7201 agcgatgttg taatgccacc tatcggttgg ttaatcggtg gcgtggattt caaagattta
     7261 gccattgaaa tcgccccggc aaaagaaggt gcggaagcag tgatgttaaa atacggtgca
     7321 tttatccaaa acgtatttga tttcttaatt atcgcacttg cggtattcgg tatggtgaaa
     7381 gtgattaact cactgaaaaa agctccagtt gtagaagaag ctcctgcaga gccaacagcg
     7441 gaagagaaat tattaactga aatccgtgat ttattgaaaa aataattaac tgattttgaa
     7501 acaagggcta ttttagaata tctagaatag ccctttgtgt tatggttaaa aagaaaaaaa
     7561 ccaacataaa gtcggttttt ttcatatctg ttcgatatta cgctaatttt ttgatttgcg
     7621 ctgctaattt agatttgtgg ttagccgctt tgttagcgtg gattaagttt ttagatgcca
     7681 tacggtctac aactttttgc atttcaacga aagccgtttg agctgctgct ttatcgcctg
     7741 ctgctactgc tgcatatact tttttgatga atgtacgcat cattgagcgt tggcttgcgt
     7801 tgtgttggcg gcgtttttca gattgaaccg cacgtttttt tgctgacttg atattagcca
     7861 aggtcaaact cctaaaatat ctgtgtaaaa attagatata aacaaaatcg ttgtttatat
     7921 tgcctatcga tagtttttaa ttcattttca acgagacacg tgcttgaaaa taacaccgtt
     7981 tttctgatag aaaacgatag ggcgagattt taacagtttt tttctgattt tcctataaca
     8041 aactgctaaa attatgatcg atttttagga tcagactaca agcggtctga tttttcaata
     8101 attttactaa tattactctt tattatgagc aaaaaacttt taagatcagg aatgatcgta
     8161 agctttatga ccttaatttc tcgcatactc ggtttgattc gagacattgt ggtggcaacc
     8221 attttaggca caggcgtgag tgccgatatt ttcctgtttg ccaaccgtat tcccaatttt
     8281 cttcgccgtt tgtttgccga aggggcattt tctaaagcct ttgtgccggt gttggcggaa
     8341 tataatgcgg ataacgatcc aaacaaaacg agagaattta ttgccaaagt atcgggtaca
     8401 ttaggaggtt tggtaactgt tgttaccctt gtggcaatga ttgcctcgcc tgtggttgcc
     8461 gctctttttg gtacaggttg gtttttagat tggctttacg acgggccaaa tgccgaaaaa
     8521 ttcacccaag cctctttttt gctcaaaatc actttccctt atttgtggtt tattaccttt
     8581 gtggcgttat ccggtgcggt gttaaatacc atcggtaagt ttggggtgat ggcattttcc
     8641 ccggtgttgc tgaatgtggc gattatcgcg gtagcgttat ggggcagaga ttatttcgat
     8701 tccccggata ttgccttagc gtggggggta tttttaggcg gcttattgca atttttattc
     8761 caaattccat ttatgaaaaa agagggctta ctggttaagc caaaatgggc gtggaaagac
     8821 gaaggtgtca ctaaagtccg taaattaatg attccggctt tatttggcgt ttccgttacc
     8881 cagctaaatt tactgctaaa ccaagtgatt gcctcgtttt tgattaccgg ctcgattagt
     8941 tggatgtatt atgccgaccg cttaattgaa tttccgctcg gtttatttgg aattgcgatt
     9001 tccaccgtcg tgctgccaag cctttcccgt attgcgaaaa acaaagaact cactgaaatc
     9061 caacgtggag aacactttca aaacacaatg gattgggggg tgagaatggt gctgttgctc
     9121 ggcattccgg caatgatcgg tatggcagtg ctggctcagc cgattattat gacaatgttt
     9181 atgcggggta aatttggttt tgaagatgtg ctggcaacct cttatccact ttgggtaatg
     9241 tgcttggggt taaacagcta tatgttgatt agcgtgctgg caaacggttt ttatgccaac
     9301 caaaacacca aaacaccggt aaaagttggg attattgccg ccttaagtaa tatttgcttt
     9361 ggcttggcgt ttgctccgtt tttgggatac attggtttag cgttagcttc tgcgtgttcg
     9421 gcattagtga atgtgagctt gctgtatgtg aatctctcaa aaaatggtta ctataaagta
     9481 agccataaaa ccgtgctttt tgtgttgaaa ctattcatcg ccgcttgtgt aatgggggcg
     9541 ttggttgcct atttcacgcc tgagattgaa ctttgggcat taatgacaat gtggcagaaa
     9601 gtgtattggc tgatttggct gatgatctta gccggcggta gttattttgc ctctattttg
     9661 gtattaggca ttcgtaaaaa agatttccgc tcggcataaa atgaaatcat taaaactgaa
     9721 aatcccgccg ccggcttggt tcttgctttg tgccgcttta atgtggctgg tagctcaata
     9781 tgtgccggtg agcttgccga attatcagca tacagccata ttttttagcg gtttagctgt
     9841 ggcgataatt ggcggagcgg ttgccgtctc ggcactttgg gtcatacacc aagcgaaaac
     9901 gacatacagt ccttttcgac cacaacatac cgctaaattg gtcacttggg gcatttaccg
     9961 caaaagccga aacccaatgt atctttcgtt actattaggt ttgattgcgt gggcattatg
    10021 gttgggggca atgttggcgt ggctggtttt accgctgttt gtatggttga taacctattt
    10081 ccaaatcaag ccggaagagc aaattttagc ccaaaaattc ggcacacatt atgccaaata
    10141 ttgcaaccaa gtaaggcgtt ggctttaaat gcaagcggtg agattttgtt ggaaatttgc
    10201 aaatttttcc gaaaatctca ccgcttgtgg ggttagtgat tgaaatcagc cgtcattaag
    10261 tcgtgcgagt tgtccatcgc taaattgata aagcgttcat actgttgcag cacgtcggca
    10321 atcaactctt ctttggtcat atattgcaca tcataacctt tccgcccgtc taagaaataa
    10381 gtaatcggct cgtaaatggt attttgctca atgttcggta ggttgtcgtc acctaccacc
    10441 aaatccgata attcccgtgg cacactttca atgccgtaaa tgaaattgcg taaattttct
    10501 ttcaccactt caaactctaa tttcgggttt tgttcgttgg tgaaattcat tttagcgatt
    10561 aagccatagc tttcaaattc ctcgataagt tctaaaaatg ctggtctggc aactttaata
    10621 aagaagtgac ggacatcttg cttattgctt gggttgatga ttttctccaa gcgttgtttc
    10681 caatctttac ccgcccaatg ttggctacct tgcgagaatt ttttgttgaa gtattggtta
    10741 tctaccatta atcctttcca taagccgata cagagaatca gcataatgaa ggtaaatggt
    10801 aaggcgataa tcagtgtcat tgtttgcaga gaagccaagc cacccgaata gagtagtgat
    10861 aacgctaaga tggctaataa tgctccccaa agcacgcttt gccatttcgg tgcattttct
    10921 tcgccttgtg aagcaatgct gttgagaaca aaaatccccg agtcggcaga ggtgataaag
    10981 aaaatactga taacaatgac ggcaacgaaa gaggcaatag agccaaacgg taattgctca
    11041 aaaaaggtaa ataacagttg ttcggtattg ccgctgactt cagctaaagc accggcagtt
    11101 tgttgatcga accaaatggc agagctgccg aagctggtca tccataaaat gttaaacagc
    11161 gatggaacaa atagcacccc taaaataaat tcacgaatgg ttctgccttt agagatcttg
    11221 gcaataaaca aaccaacaaa tggcgcccaa gatgcccacc atgcccaata aaggaccgtc
    11281 cagccgctta gccagccttg atgttccggt tcataagcga aggtacggaa actcatctca
    11341 agcagcgagc taaaataata gcctaaattt tcggtgaagc ttgagaaaag taatagagtt
    11401 gggccggtga ttatcacaaa aataagtagc aatccggcta atgtgagatt gatttcactt
    11461 aagattttaa cccctttgcc tacgcccgaa acggcagata acacggcaag agccattgct
    11521 actgttacga taatcgcaag aacagtaaaa ttgctctgtt caattaaacc tagattgtta
    11581 aagccagcac tgacctgcat caccccaaag ccaagtgtag tcgttaaacc gaaaatcgtg
    11641 ctacaaaggg caataatatc aattaaatgc ccccagaagc ctgaaatacg atgttttagt
    11701 aagggataaa atccggaacg aatagtgagt gctaacttat atctgaagcc aaaataagca
    11761 agagctaagg caatcacacc ataaattgcc caagcgtgaa taccccaatg atagaacgtt
    11821 gtcatcatcg cttctttcat acgctccggc tcagttaaat tttgttggac gggtttaagg
    11881 taatgcaaaa taggttctgc taccccaaaa tacattaacc cgatccccat tccggcggcg
    11941 aataacatcg caatccaaga gccaaaacca aattcaggct catcggtatc tgcccctaat
    12001 ttaatatcac ccaatcggct gaaagagaga aaaattagaa acaggaaaaa gatagagcct
    12061 gcaaaaatat agaaccagct aaaatgttgg aagagactat ttttgatggt atcaagtgag
    12121 gtttgtgctt gctgtggaaa gatgatacag aaaacggcaa caaagctgac aaagagtaaa
    12181 ctcggtagga aaatcggtac cctaaaggta cttcctgtgt ttaatttttt gattaaatcc
    12241 aatgctattt cctctatttt tgaatggtta gaggcttgaa tatagcaaaa agatataaaa
    12301 ataacaaatt taagacgtat tggtaataat attgcaacct aatgggtttg gtaaaaaaat
    12361 cgggaaattt gaccgcttgc acattcatta tttgcgagta gaatattttt catttataaa
    12421 aaacgaataa agaatgcaca cacaacataa cgctcaaaaa atggttttgc ccattttact
    12481 gctgatttcc ctttctcatt tgttgaatga tttagttcaa gcagtaatgg tttcgatcta
    12541 tccaatgcta aaagaaaatt accaactgag ttttgctcaa attggtatga tttcactcat
    12601 ttatcaaatt accgcatcta ttattcagcc gggtattggg ctttataccg atacccaaaa
    12661 ccgaatttat tgcccgtcag tatgctgatt acgcttcttt ccgtgatttt acttgccttt
    12721 tcgccgaatt ttggcgtgtt actgatagcc gctgcgttaa tggggatagg ctctgccatt
    12781 tttcaccctg aagcctctcg ggtggctcga atggcatcgg gcggtaaatt tggtacagct
    12841 cagtcgcttt tccaagtagg tggaaacagt ggatcggcgt taggtccgct cttagttgca
    12901 ttatttattg tgccgttagg gcaaagtgcg gtgatttggg ttgttgcatt tgtattattg
    12961 gcattatgat gggttttata taaagtaagc cgttgggtga aatatgaagc caaaccgctc
    13021 attatttcac caaaccatat tcaacaacgc ttacacggta aattattagc cagagcatta
    13081 ttaattatcg ctttattgat gttagcgaaa tttatttata ttgcgagcct cagtaactat
    13141 ttcacctttt atttaatgga aaaattccaa ctcaatatag caatggcaca gctctctcta
    13201 tttacctttt taggtgcagt tgctttaggc gcttttgtcg gcgggccgat tggcgataag
    13261 attggacgaa atgcggtgat ttggttctct ttcttaggta tggcaccttt tgctttgttg
    13321 ttgcctcacg cagatctctt ttggacgatt gtgtgtgcga tttttgccgg ttttattatg
    13381 tcatcagcgt tctccgctat ggtggtttat gctcaagaag ccgtaccagg cagagtaggg
    13441 ctgatttccg gcacaatgtt cggtttaatg tttggtattg gcggcttaag tgccgccgta
    13501 ttgggttttt ttgcggatga atatggcttg gagagtattt ttaaagcctg tgcctatttg
    13561 ccactacttg gttttgctgc attagggcta ccaaaacgaa atatttaacg ttttattttt
    13621 agcgtttgac accagctttt ttcataccca ataagaaaac ccccacccca atccaaacca
    13681 gaatgtagcc tacagcacgt tcggcggaaa gtgtctcatt aaaaatcagc acaccgcata
    13741 aaaattgcag ggtaggtgaa atatattgca gcataccgag tagcgacatt gaaatgcgtc
    13801 ttgcacccat tgcaaaccat agcaatggta aggtagtggc aatgccggag cagagtagca
    13861 ctgccatttg taaaggattg agttcactga ataccaaaat gttttggtgg taacaaaagc
    13921 agagataggt gatggcaaaa ggcgacatca gcaaagtttc taacgccaaa ccagacaaag
    13981 gttccattgg ggcaagttta cgaatcagcc cgtaaataca gaaactggcg gctagaatca
    14041 atgcgaccca cggaatttgt ccggcaggaa tagcaagcca taaaatgccg ctaattgcaa
    14101 acagcagagc caataattgg gctttattca gctgctcttt tagaataagc ctaccgacaa
    14161 acacgttgaa aatggggttg ataaaataac ctagactggc atctaaaata tgctcattga
    14221 cgattgccca taagtaaacc agccagttca cgccaatcat aaaagaagaa agcacgaaca
    14281 gcccgagtac ctttggctgt ttaaaggcat taataaccgc tcgcccttgt tggaaaatca
    14341 gcagcagaaa cacagcaaat agggcagacc aaagcacccg ttgagccaaa atttgctcgg
    14401 caggcattcc cgattggttg atcggatacc aataaatcgg aaaggttccc caagttaagt
    14461 agcacagtag ggcatagtgc caaccctgta atttgcctga aatattcatt ttgctttcct
    14521 aaacgagtgt acaagcggtc atatttgtcg atttttttgc aaattgcaaa tcacaaaacg
    14581 gcataaaaaa ttaggctttt tcaatgccga aagaaataac ctcttcaatt ttttccgcat
    14641 ccattgccag cattaacagc ctatcaaccc caagggcgac acctgagcag tttggaaaac
    14701 ccgctttgag tgcggcaaga aaacgcacat ctagttgctg tggctccagc cccatttttt
    14761 cacgttgcag attatcttgc tcgaagcgat gaatttgctc atcagcatcg tctaattcgt
    14821 ggaagccgtt acagagttcc aagcctttgt agtaaaactc aaaacgttcg gcaacacggt
    14881 gatcttccga gctaatttga gctaatgccg cttgggtgga agggaaatga taaacggcag
    14941 ttggtctttc ttgcccgata ttggcttcga caacctcgct gaataaaaat tgtaacaagg
    15001 tgtcacgctg ttcatcatca tcacattgca agccgtgttt tcgggctttt tccacaagtt
    15061 gtgctttggt ggcagaaagc ggatctaatc cgacataggt ttggaacaca aattgatagc
    15121 tgaatgattc tgccggttcg cagtccaaaa tttgttgcag taaatcatcc acttcattga
    15181 ttaagcgata catatcaaaa tgcgggcgat accactccag catcgtaaat tcagggttgt
    15241 gtcgcttacc ggcttcctcg ttgcgaaata ctttacacag ttggaaaatc ggtccactcc
    15301 cagcagcaag tagtcgcttc atatgatatt ccgggctggt catcagatgg agtgttttcg
    15361 cctcagggga aaaaggcgat tgaaactgcg tattgaaagt cgaaagatga acgtctgtca
    15421 ccgaaaattc gcttaaaatc ggggtttcta cctctaaaag ccctcgatcg gtaaagaact
    15481 tgcggatttc cgtaatgatt tttgaacgtt ggatcaggtg aggaatagag gctgttggtt
    15541 gccaatcaat attatcgagt tgtaaattgt tcataaaaaa tgaccgcttg aaaatgtgag
    15601 gctattttag cctaaaaaag tgagttgccc tagttaccga tcaagaaaaa taaagagagg
    15661 gttttaactt ttttgcaaca aattaaattt tctcatttta aacattagaa attttctttc
    15721 tatcactgtc
//
LOCUS       DANLXD010000060        15642 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.060, whole genome shotgun sequence.
ACCESSION   DANLXD010000060 DANLXD010000000
VERSION     DANLXD010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15642)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15642)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15642
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.060"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(199..1074)
                     /gene="ubiA"
                     /locus_tag="PXD18_001561"
     CDS             complement(199..1074)
                     /gene="ubiA"
                     /locus_tag="PXD18_001561"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HDL6301988.1"
                     /translation="MNNETLFSKQKWIAYAQLMRFDKPIGTLLLLHPTLWALFIAAEG
                     MPPVAILAIFTLGVIVMRAAGCVINDYADREIDGHVKRTSQRPLATGRVTTTEAKVIF
                     AILLLFAFLLDLMLNRYAFLLSFVAVFLAVIYPFMKRFTHLPQVVLGMAFGWSIPMAF
                     GAVTETLPLECWLLFFANLAWTVAYDTQYAMVDRDDDLRIGVKSTAILFAQYDNKIIA
                     LLQFITLILLGLLGVVKDYHIGYFVVLALSATLFIYQCWLTKKRERSECFKAFLNNHY
                     FGLGVFVAILVGIYF"
     gene            complement(1067..1828)
                     /locus_tag="PXD18_001562"
     CDS             complement(1067..1828)
                     /locus_tag="PXD18_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family transcriptional regulator"
                     /protein_id="HDL6301989.1"
                     /translation="MKQANRHKKIIELVNQLGYVSTEQLVAELNVSPQTIRRDLNEMA
                     ENNLIRRHHGGAAAPSNTENSDYTHRKQFFSHEKNAIAQQVAKLIPNGASLFLDIGTT
                     SEAVALALLSHKNLKVVTNNLNAAHILMQNEDCQITVAGGGLRSDGGLIGEETVRFIN
                     QFRLDFGILGISAVDMDGSMLDYDYHEVQVKRALMECSRQVVLVTDHSKFTRTAIARL
                     GNVKEVNYLFTDQDLPLELQTHLSQSDVIVKICNE"
     gene            complement(1895..3262)
                     /gene="purB"
                     /locus_tag="PXD18_001563"
     CDS             complement(1895..3262)
                     /gene="purB"
                     /locus_tag="PXD18_001563"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDL6301990.1"
                     /translation="MELTALTALSPIDGRYQDKVASLRPIFSEFGLLKFRVTVEVRWL
                     QKLASHTQINEVPVFSEKANDYLNQIVADFSLEDANRIKTIERTTNHDVKAVEYFLKE
                     KCEALPELQAVNEFIHFACTSEDINNTSHALMLKTAREEVLLPEWKKVIDAVAELAKC
                     YQHIPLLSRTHGQPASPTTMGKEMANVAYRLQRQYKQLENLEILAKINGAVGNYNAHL
                     SAYPEIDWHTFSQEFVESLGVTWNPYTTQIEPHDYIAEFFDCVARFNTILIDFDRDMW
                     GYIALNHFKQRTIAGEIGSSTMPHKVNPIDFENSEGNLGLANAVMAHLGQKLPISRWQ
                     RDLTDSTVLRNLGVGLGYALIAYASTLKGISKLEVNEQHLRDELNQNWEVLAEPIQTV
                     MRRYGIEKPYEKLKELTRGKRVDETAMREFIDKLEIPENEKNRLKEMTPASYIGYAVE
                     LVDKL"
     gene            complement(3296..3925)
                     /gene="hflD"
                     /locus_tag="PXD18_001564"
     CDS             complement(3296..3925)
                     /gene="hflD"
                     /locus_tag="PXD18_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high frequency lysogenization protein HflD"
                     /protein_id="HDL6301991.1"
                     /translation="MADYHDITLAYAGVCQAATLVQQFAHKGMADREAFKCALESLLI
                     TQPESTLSVFGDDLSHLKMGLETALAQTGGGNGKLDTEVGRYWISLLALSQKLNKNPE
                     AKQQLAQRLQQVERQLALYEDNVMADQMIANLAAIYSDIISPLGTKIHVMGMQDYLVR
                     PDIQNKIRASLLAGIRAGILWQQVGGSRWQFLFSRKKIFNQAQKFYRQI"
     gene            complement(4057..5721)
                     /gene="cydC"
                     /locus_tag="PXD18_001565"
     CDS             complement(4057..5721)
                     /gene="cydC"
                     /locus_tag="PXD18_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter ATP-binding
                     protein/permease CydC"
                     /protein_id="HDL6301992.1"
                     /translation="MKSLFPFFALYQTHFGRLLLGVVLAILGLAASIGLLSLSGWFLA
                     ASFLAGNALIFNFFYPSSGVRGLAVGRTISRYFERLVTHDATFRVLANLRASVFKKLI
                     PLSPSGLNRFRNSELLNRLVADVDTLDTLYLNLVSPFVSAVMIIAFMAIGLSFVSVPL
                     MLIICGTLLVLLAVIPTVFYRLGLKLGRNAIQSRANYRSQFIEWVQLNAEFLLFGNLN
                     QMSEKLQQTEQQWLNAQSKESRLSGLSNSLIMLSNGILTCVVIYLVSTSINVPTAKYP
                     EALIALVIFCVMASAEILSPIGIAFLHLGQVITAAERISEITEQQPNVTFGSKAEWQN
                     LSQNQPLVRCENVSFAYYGEQNVLNNLSFKVLKGQKVAILGKTGSGKSTIFQLLNRNY
                     DPTSGQIWLNNCKIDEYSEPMLRSKLVTLSQRVHIFSQTLKDNLLMGNAQATDEQMQE
                     AVRKVGLGHLLETDGLNLWLGEGGRPLSGGEQRRLGLARLLLSTAELVLLDEPTEGLD
                     RETEQQILNLILTHCCDRTLIMITHRQSGLDKFDVVYRIDNGRLVG"
     gene            complement(5721..7487)
                     /gene="cydD"
                     /locus_tag="PXD18_001566"
     CDS             complement(5721..7487)
                     /gene="cydD"
                     /locus_tag="PXD18_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter
                     permease/ATP-binding protein CydD"
                     /protein_id="HDL6301993.1"
                     /translation="MEKQRQRELQKWLKSQQKVIKKYMHLNILLGSFSSLCMIGQMWL
                     IATMLDKMLIGKQSPNSFLVEIMLLFCCFAARAFFIFLRERVGFKAGQTLRLHLRRQI
                     LAKMEAVGPMSIQQKPAGSWATLMLEQVENLHNFYARYLPQQFLSLIVPLLILCFVFP
                     INWAAGAILFATMPLLPLFMILAGMKAVEANQRNIGILSRISGQFLDKLKGLETIRLF
                     GQAEKQTEQIYQSTEDFRISTMDVLKMAFLSSAVLEFFTAVSIAVTAVYFGFIFLGEL
                     DFGYYGTGVTLFIGFFCLMVAPEFYQPMRELGVFYHDKAAAISAADNIETFLKEKVKT
                     QGGNLQENVENQPLVIQAKDCVIFSPQGKALTQALNFELNAHQHIALVGQSGAGKSSL
                     MNMLLGFLPYEGSVTINGTELRDLNLSQWRAKLAWVGQNPQLMHGSLKENILIGNPNA
                     TDSELAKALQLSKADEFVARLGLEHQVQDSNIGISGGQAQRIAIARALLRPYELLLLD
                     EPTASLDMDSEQQVLAALHNLSREQTTLMITHRVEDLTQCDEIWVMKQGQIIQKGRFT
                     ELEHTGFFAELIHNELVHQGEI"
     gene            complement(7602..11699)
                     /locus_tag="PXD18_001567"
     CDS             complement(7602..11699)
                     /locus_tag="PXD18_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB"
                     /protein_id="HDL6301994.1"
                     /translation="MTDENKQTATNQTDSAQEPQATQPKKSKWRFLKHGFCLTFILLL
                     LAILFLCTGYGQRKVLSWVDKFVEPLQLGQVQGSLQDGLQLSDARFVMDGVNVTVGQA
                     DLHIGFSCLLHYEMCLNNLSLKDTEVLIDTTKLPPSQPKEETEPFTELNLPLGISAQN
                     INLENIKVKVDDMDIHLNHFHTALSGKGRAITVHPTQLEGLNLLLALKLDETDTEQAV
                     DFAQKNAKTEALSATNPQEIADKVIQEAVEKTSEKVVEGFHQLQRKTVAQAEQVDNKV
                     DWAAIKAQLAQPLLDKNIRFSLPLDLNIEQIDIANVAIAQKAKDEKGNLIEPISLLNV
                     ASLQLQAQAKDQHINLKSLDFKSDQGDLTASGSLSLQDNYPLSWTLSGHEAKTAKVKL
                     PFNQIEASLSGELYDKTSLKVKTAGAISASLEGNVALAQAKTPFDLSLKSESMRYPFA
                     PQQNGDVLSLENIAMRLNGNLLDYALEAKVSAKGMGVPASSASLTGKGELTHFNIQDL
                     SLNTLEGTAKIDGLVDWSEGVAWRSNLKLQHINTKSLLADWPAVLSGSLSSEGYAGRG
                     NSASGWKADVSNIDIKGSLLQKNLHLSGNLKADHQQLLDVPGLSLVYGENKIDLKGVL
                     GEKSDFYADIKAPNLQGLVPNLKASVNGNAKLSGKVSEPNIDLDLVASNVGYEQFKLQ
                     NLTAKGKITTEKTIQGDLTLGLRQFAYNEIKVGNATLLLKGNEENHSLKLSAKGNPVG
                     ADLQISGKFDRLKEIWEGQLSQVSIQSTEFGQFQADKAVNVKYDNKAINANISAHCWH
                     NRKINLCFPTAFNAGVEGKVPFEIRNFDLAVLQQFLEKNSQLSGIVNAKGDAAWFKNK
                     QPQVNLDLTSNAIKFIQKMEGGKSFPLTVSPLKIDLKMSDNNLTLKSDLRVENNGRLS
                     TDLVMKDLSKARALSGNIHLDQLSLKLIRPLLERGDSVDGNVNARLTVSGTATSPLLH
                     GNLNVTELKARSVTMPFDITGGNLAMNFHGATSTLSGKLQTKQSELRLEGDADWRDLN
                     AWKTRVHAQANRFQVDIPNIAKVAVSPDIQVTATPTLLTLSGNVDIPWARIEVEQLPE
                     SAVSVSGDEVIMDGSVKNKVPFSQRNIPAQTSGGMAINADIKINIGNDVKLKAYGLNS
                     NVNGLLSVRQGKQGLGLYGQVHLREGRFAAYGQDLLIRKGDISFAGSPSQPTLDIEAI
                     RNPEAMEDPTITAGVRVTGLADNPTVKVFSDPAMSQNEALSYILTGRSLESSGDTSSS
                     NAVAAALLSMSLSKSSKLVGDVGSTFGLKDLSVTTAGIGDNTKVEVSASLAPKFRVKY
                     GVGIFAPLTELTLRYNLTPRLYLQWVSSINQAVDLMYRFEFDELF"
     gene            complement(11780..13615)
                     /locus_tag="PXD18_001568"
     CDS             complement(11780..13615)
                     /locus_tag="PXD18_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor"
                     /protein_id="HDL6301995.1"
                     /translation="MNTKLHFLTFCCLVAFASMAQANQEQRLSDVDRERVENLQEKLA
                     EDSDDEPEIEPLVTLEVKGIQGKDAKKNVELYLDQIANEYADGSERYQYLVQTTVDKA
                     LRALGYYNSRYQFVQLPQEGKKPLLVLNVELDKETVKIDETDIVLQGDAKTDEDFAHL
                     VSKAPKQGSRLNHKTYDNFKGDIESTAFSKGYFDGHWLYHRLEVYPTDHKADWRLGYD
                     SGKRYHYGQIRFVDSQIKEEYLQNILKIHSGEPYLANDLSILTQDYLSSNWFSSVMVE
                     PHLNEQDKLVDLNVLFQPKKRNEVEIGIGYETEVGPRLQLNWKKPWLNSRGHSIESRT
                     YVSKPEQTFEFGYNIPLREDPLHYYYQLSGTLENEDQNDTKSTAATLGLQRFWTHETG
                     WSFSVGLKARYDSFTQANDRFKTLLVYPTASLNRTRTDGKPYPLWGDTQKLTVNWGSR
                     AVGSDVNFYSYKASTSWARTYFDNHRFYLRAELGYLKANQFERIPPALRYFAGGDMSV
                     RGFGYKDISPRDPSNGKRVGGSHLATGTVEYQYQVYPNWWGAIFYDAGLASNKFKTQD
                     LYYGTGLGVRWASPIGAIKFDVATPVKSPDNSKGIQIYIGLGSDL"
     gene            complement(13627..14472)
                     /locus_tag="PXD18_001569"
     CDS             complement(13627..14472)
                     /locus_tag="PXD18_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HDL6301996.1"
                     /translation="MFKQINKRLNFNIFLQMFVLFTPLVQAAQMAIVIDDVGYRIKED
                     REILALPKAVSVAIIPVAPYATERAKDAYNQKRDILIHLPMEPKSKQPIEEGGIHIGD
                     NEEKIRKLIHTSRGQVPYAIGLNNHMGSGATSDSATMQHLLKVLKENTLFFLDSKTIG
                     SSVAAKTARQFGINTLERDIFLDDSDLLADVQKQFAHAINHARKNGVAVVIGHPRKNT
                     ISVLKQNLAQLPQDIELVSVGNLWRNEKTVPDKPFIMLFEQEPALSSVPPYDSIPLLR
                     GIPKE"
     gene            complement(14473..15636)
                     /locus_tag="PXD18_001570"
     CDS             complement(14473..15636)
                     /locus_tag="PXD18_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDL6301997.1"
                     /translation="MLVKRINSYCWTAIFSGVISFSTPFSFANNLNQIQQKIQQQTSK
                     INEQKQKRNALQSTLKNQEVEMGKVLDKLQKTEMSLTEVRQTIKATETEIARLEKLEK
                     QQKEKLKEQLDSAYRSGVNPSVLERLMSEEAKNAERMTAYYQHMNNIRIDAIVEIRKT
                     QADLKARRDELKGQQKDHQTQLNEQKKQEKDLKKVQSQRESTLRLIDKTLEQDQSRLE
                     NLRSNEQALKQQLEQAQREAQQAEKREQQREKQAKSGQSKTTENVERTPIKAGRYTMP
                     VSGNIITPFGNNWHGVVIGASAGTSVRAMASGRVIMAQWLAGYGNMVAIDHGNGDISL
                     YGYNQSISVSKGSRVQGGQVIAKVGNSGGQSRSALYFGVTRKGTPINPLNLVK"
BASE COUNT         4375 a         3518 c         2930 g         4819 t
ORIGIN      
        1 gtaatgtccc ttttttgaat gtctactaca aaatgggata ttttacaaac cgattgacta
       61 atgaagcaag aatataatta actacaactg gatatatttt gcaaatttcc cgataaattt
      121 caccgcttgt agataaaaac cgtagataaa aaccatagat aaaaaatagg agctaaacat
      181 ttttagcccc taccgtcatc agaaataaat cccgactaaa atcgccacga acacacctaa
      241 gccgaaatag tggttattta gaaacgcttt aaagcattcg ctacgttctc tttttttggt
      301 cagccaacat tggtagataa acagcgtggc acttaaggct aatacgacaa aatagccgat
      361 gtgataatct tttaccacgc ccaataaccc caataaaatc aaggtgataa actgtaataa
      421 cgcaataatt ttattatcgt attgagcgaa taaaattgca gtggatttaa ctccaattcg
      481 taaatcatcg tcacgatcaa ccattgcata ttgggtgtcg taggcgactg tccacgctag
      541 attggcaaaa aacagcagcc agcattcaag tggaagagtt tccgttaccg caccaaatgc
      601 catcggaatc gaccaaccga atgccattcc aagcactact tgtggcaagt gggtaaaacg
      661 cttcataaag ggataaatca ccgccagaaa aactgccaca aaggaaagca gaaacgcata
      721 gcggtttagc attaaatcga gcagaaaagc gaacaacagc aagatggcaa aaatgacttt
      781 tgcctcagtg gtggtcactc tgccggtagc taatgggcgt tgagaggtgc gtttaacgtg
      841 tccgtcaatt tctctatcgg cataatcatt aatcacacaa cctgccgcac gcataacgat
      901 taccccaagg gtaaaaatgg ctaaaatcgc aacaggcggc attccctctg cggcaataaa
      961 taacgcccat agtgtggggt gtaataataa taacgtgccg atgggtttat cgaaacgcat
     1021 taactgggcg taggcaatcc atttttgttt agaaaaaaga gtttcgttat tcattacaaa
     1081 ttttgacgat aacgtccgat tggcttaaat gagtctgtaa ttctaacggt aaatcttgat
     1141 ctgtaaacaa ataatttact tctttaacat ttcctaaacg tgcaatagct gtacgggtaa
     1201 actttgaatg atcggtcact aaaaccactt gtcgggaaca ttccattaat gcacgcttta
     1261 cctgcacttc gtggtaatcg taatcgagca tagagccgtc catatccacc gcactaatgc
     1321 ctaaaatccc aaagtccaaa cggaattggt taataaagcg aaccgtttct tctccgatta
     1381 gcccgccatc acttcttagc cctccgcctg ctaccgtaat ttggcaatct tcattttgca
     1441 tcagaatatg agccgcattt aaattattgg taactacttt taaattttta tgcgaaagta
     1501 aggctaatgc cactgcttct gaagtcgtgc caatatctaa aaataatgat gctccatttg
     1561 gaatcagttt tgccacctgt tgggcaatcg catttttctc gtgtgagaaa aattgcttgc
     1621 ggtgggtgta atcactattc tccgtattgg aaggagcggc tgccccaccg tgatgacggc
     1681 gaatcagatt attttctgcc atttcattca gatcacggcg aatggtttgc ggactcacat
     1741 tcaattcagc cactaattgc tcggtactca catagccaag ctgattaacc agctcaatga
     1801 tctttttgtg tctgtttgcc tgtttcatat ttcctctttt gcaaataatt tgcagaaaaa
     1861 gaccgcttgc aagcggtctt ttttcagtta aattttacaa tttatcaaca agttcaaccg
     1921 catagccgat atagcttgcc ggtgtcatct ctttcaaacg atttttttca ttttccggaa
     1981 tttccaactt atcgataaac tcacgcattg cggtttcatc aacccgtttg cctcgagtca
     2041 gctctttaag tttttcatac ggtttttcaa tgccataacg acgcataaca gtttgaattg
     2101 gctctgccaa tacttcccag ttttggttga gttcatcacg caagtgttgt tcattcactt
     2161 ctaatttgct aatacctttt aaggtggacg cataagcaat taacgcataa cctaaaccta
     2221 cacctaaatt acgcaacacg gtggagtcag ttaagtcacg ctgccagcga gaaatcggca
     2281 atttttgccc caaatgagcc attaccgcat ttgccaagcc aagattgcct tcggaatttt
     2341 caaaatcaat cgggttcact ttatgtggca ttgtgctaga gccgatttca ccggcaatag
     2401 tgcgttgttt gaagtgattt aaggcaatgt agccccacat atcacgatca aaatcaatta
     2461 aaatcgtatt aaaacgagcc acgcaatcaa agaactccgc aatataatcg tgcggttcaa
     2521 tttgggtggt gtatgggttc cacgtcacac ctaacgattc cacaaattct tggctgaaag
     2581 tgtgccaatc aatctccgga tatgctgata aatgtgcgtt atagttgccc actgctccat
     2641 tgattttagc gagaatttct aaattttcta actgtttata ttggcgttgt aaacgatatg
     2701 ccacatttgc catctcttta cccattgtgg tcgggcttgc cggctgaccg tgtgtgcgag
     2761 aaagcaacgg aatatgttgg taacatttcg ccagctctgc tacagcatca atcacttttt
     2821 tccattcagg taataatact tcttcacgag cggttttaag cattaaagcg tgcgaagtat
     2881 tattgatatc ttcagaagta caagcaaaat gaataaattc attcaccgct tgtaattcag
     2941 gcaacgcttc acatttctct tttaggaaat actccaccgc ttttacatcg tggttggtgg
     3001 tacgttcaat cgttttaatc cgattggcat cttctaacga aaaatcagcc acaatttggt
     3061 ttaggtaatc gtttgctttt tcagaaaaca ctggaacttc attaatttgt gtatgcgatg
     3121 ccaatttttg taaccagcga acttccaccg tcacacggaa ttttaataag ccaaattcac
     3181 taaaaatcgg acgaaggctc gcaactttgt cttgataacg tccatcaatc ggggataacg
     3241 cagttaaagc ggtaagttcc attgttttat attctccaaa taggtaaatg ttcggttaga
     3301 tttgacgata aaatttctgt gcttggttaa aaattttctt gcgtgaaaat aaaaattgcc
     3361 aacggcttcc gccgacttgc tgccacaaaa taccggctcg aataccggct agtagcgagg
     3421 ctcgaatttt attctgtata tccgggcgaa ccaagtaatc ttgcattccc atcacgtgaa
     3481 ttttcgtacc taacgggctg ataatatcgc tataaatagc ggctaaattg gcaatcattt
     3541 gatctgccat cacattatct tcatacaggg ctaactggcg ttccacttgc tgtaaacgct
     3601 gggctaactg ttgttttgct tcagggtttt tattgagttt ttggctaagg gcgagcaggc
     3661 ttatccaata acgtccgact tcggtatcta atttgccgtt accgccgcca gtttgagcta
     3721 atgcggtttc taagcccatt tttaaatggg aaagatcatc gccaaataca cttaacgttg
     3781 attccggctg agtgattaac aggctttcta aagcacactt aaaagcctct ctgtctgcca
     3841 tgcctttatg tgcaaattgt tgcactaacg tcgccgcttg gcaaacgccg gcataagcaa
     3901 gggtaatatc gtggtaatcc gccatctctg taaaattcaa tatgataaaa cattagtggg
     3961 aatatagcat tttttcagct tcttttgaat ggcaaaaggc atttattcta ttgaaaaata
     4021 aatgcctttt cattaatacg caatttgctg caaaaactat cctaccaatc gcccattatc
     4081 tattcgataa accacatcaa atttatccag tccgctttgg cggtgagtga tcataattaa
     4141 ggtgcgatca cagcagtgag tcaaaattag gtttaaaatc tgctgttcgg tttctctgtc
     4201 cagtccttct gttggctcat caagtaagac taattcagca gtactcagga gcaaacgggc
     4261 aagccctaaa cggcgttgtt cgccaccaga aagcggtctg ccgccctcgc ctaaccataa
     4321 atttaagccg tctgtttcaa gcaaatgccc taagcctact tttcttactg cttcttgcat
     4381 ttgttcgtct gtagcttgag cattccccat taataaatta tcttttaggg tttggctaaa
     4441 aatatgcact cgttggctta aggtaactaa ttttgagcgt aacatcggct ctgaatattc
     4501 gtcaatttta caattattca gccaaatttg accgcttgta gggtcgtagt tgcggtttaa
     4561 cagttggaat atggtcgatt ttccgctacc cgttttacct aagattgcca ctttctgccc
     4621 ttttaatacc ttaaaggaaa gattatttag tacgttttgc tcgccgtaat aagcaaagct
     4681 cacgttttca cagcgtacaa gcggttgatt ttggctcaaa ttttgccatt ctgccttgct
     4741 accaaatgtt acattaggct gttgttcggt aatttcacta atccgctcgg cggcggtaat
     4801 cacttgccct aaatgcaaaa aggcgatacc aatcggggaa agaatctccg ccgatgccat
     4861 tacacagaaa atcactaacg caattaaggc ttcagggtat tttgcagtgg gcacattaat
     4921 cgaagttgaa accaaataga tcaccacaca agtcaaaatg ccgttggata acattatcaa
     4981 gctatttgat aagccggaca gtcggctttc tttgctttga gcgttcagcc attgttgttc
     5041 agtttgctgt agtttttcgc tcatttggtt caagttgcca aagagtaaaa attctgcatt
     5101 taactgtacc cactcaataa attggctgcg gtaatttgct cggctttgta ttgcattacg
     5161 ccctaatttc aaacccaatc gataaaatac ggtaggaata acggcaagca ataccaatag
     5221 tgtgccgcaa atgatcagca ttaatggcac ggaaacaaaa gaaagcccga ttgccataaa
     5281 tgcaataatc atcactgcac tgacaaaagg cgagactaaa ttcagatata gggtgtctaa
     5341 cgtatccaca tctgccacca agcggtttaa caattcgctg tttctaaagc gatttagccc
     5401 gcttggactc agtggaatca attttttaaa gacgctagca cgcaaattcg ccaatacccg
     5461 aaaagtcgca tcgtgggtga ctaaacgttc aaagtaacgt gaaattgtcc gccctactgc
     5521 caaccctctc acccccgatg aagggtagaa aaagttaaaa ataagcgcat tgccggctag
     5581 aaatgaggca gctaaaaacc aaccggaaag gctgagcaaa ccgatacttg ccgctaatcc
     5641 taaaattgcc agcacaacac ctaataatag tcgcccaaaa tgggtttggt agagagcaaa
     5701 aaacgggaac aacgatttca ttagatttct ccctgatgca ctaattcatt atgtattaat
     5761 tccgcaaaaa agccggtgtg ttctaattca gtgaaacgac ctttctgaat gatttgccct
     5821 tgtttcatca cccaaatttc atcgcattgg gttaaatctt ccactcgatg agtaatcatt
     5881 agcgttgttt gctctcggct gagattatgc agagcggcta acacttgctg ttccgaatcc
     5941 atatcaaggc ttgcagtcgg ctcgtctaac agtaataatt cgtacgggcg aagcaacgct
     6001 cgtgcaatcg caatccgctg tgcttgcccg ccagagatac cgatattact gtcttgcact
     6061 tgatgctcca accctaaacg tgccacaaat tcatcggctt ttgaaagctg taatgccttg
     6121 gctaattcag aatctgtcgc attagggttg cctattaaaa tattctcttt caaactgcca
     6181 tgcattaatt gcggattttg ccccacccac gctaatttcg ctcgccattg gcttaaattt
     6241 aaatctcgca gttcggtgcc gttaatcgta accgaccctt cataaggcaa gaaaccaagt
     6301 aacatattca ttaatgaact ttttcctgca ccactttgcc caaccaaagc gatatgttgg
     6361 tgtgcattca actcgaaatt taacgcttgg gttaaggctt tgccttgtgg tgagaagatc
     6421 acgcaatctt tggcttgaat cacaagcggt tgattttcaa cattttcttg caaattgcca
     6481 ccttgcgttt tcaccttttc ttttaagaaa gtttcgatat tatctgcggc actaatcgct
     6541 gctgccttgt cgtgataaaa cacgccaagt tcacgcatcg gttggtaaaa ctcaggtgcc
     6601 accattagac aaaagaagcc gataaataag gtcacgcccg taccataata gccaaaatcc
     6661 agctcaccta aaaaaataaa gccaaaatag accgccgtca ccgcaatcga taccgccgtg
     6721 aaaaactcca ataccgcaga ggataaaaac gccattttta gtacgtccat cgtactgatt
     6781 cggaaatctt cggtgctttg gtagatttgt tcagtctgct tttccgcttg cccaaataag
     6841 cgaatggttt ctaaaccttt taatttatct aagaactgtc cgctaatacg ggaaagaatg
     6901 ccgatattac gctgatttgc ctccactgct ttcattccgg ctaaaatcat aaataaaggt
     6961 aataatggca ttgttgcaaa taaaatagcc cctgctgccc agttaatcgg gaatacaaaa
     7021 cagaggatca gtaatggcac tatcagcgat aaaaattgct gtggcaaata gcgtgcgtag
     7081 aaattatgta gattttccac ctgctcgagc attaaggttg cccagctgcc cgccggtttt
     7141 tgttgaatgc tcatcggccc gactgcttcc attttggcta gaatttggcg gcgaagatgt
     7201 aaacgcaagg tttgccctgc tttgaaaccg acacgctcac gcagaaaaat gaagaatgct
     7261 ctggcagcaa aacaacagaa taagagcata atttcaacca gaaagctatt cggtgactgc
     7321 tttccgataa gcattttgtc taacattgtg gcaatcagcc acatctgtcc aatcatacat
     7381 aaactactga aactccctaa cagtatgttt aagtgcatat attttttgat gactttttgc
     7441 tgacttttaa gccatttttg taattcgcgt tggcgttgtt tttccataat tttgtcaatt
     7501 tttttgtttt ttcaaccgct tgtaaatcgg gtttgccatt ctactataaa gcaaaaaggt
     7561 tgttaatggc gaaacattaa caacctttca ttcagcctta actagaatag ctcgtcaaat
     7621 tcaaagcgat acattaaatc taccgcttgg ttaatacttg agacccattg taagtacaat
     7681 cttggcgtta aattatagcg taaggttaat tcggtaagcg gtgcaaaaat gcccacgcca
     7741 tacttcactc tgaatttagg ggcaaggctg gcacttactt ctactttggt gttatcgcca
     7801 atacctgcgg tggtcacgct taaatctttg agtccgaaag tgctaccaac atcacccacc
     7861 aatttactgc tttttgataa gctcatactg agtaatgccg ctgcgactgc attactggag
     7921 ctggtatcgc cactgctttc caatgaacga ccagttaaaa tataggaaag tgcttcattt
     7981 tgcgacattg ccggatcaga gaatactttt accgttggat tgtctgccaa accggtcact
     8041 cttaccccag ctgtaatggt cggatcttcc attgcctccg gattgcgtat agcttcaata
     8101 tctaaggttg gctgagacgg tgagccggca aaactaatat cacctttacg aatcagcaag
     8161 tcttgaccat aagcggcaaa tcgtccttca cgcaaatgaa cttgcccgta aagccctaaa
     8221 ccttgtttgc cttgcctgac agacaataag ccattcacgt tactgtttaa accataggct
     8281 ttgagtttga catcattacc gatgttaatc ttaatatctg cattaattgc cattccacct
     8341 gaggtttgag ccggaatatt acgttggcta aacggcactt tatttttcac agagccgtcc
     8401 ataatcacct catctccact tacactgacc gcactttcag gtaactgctc gacttcaatt
     8461 cttgcccaag ggatatctac atttccactt aaggttaaaa gagttggcgt tgccgtcact
     8521 tgaatatccg ggctaactgc cacttttgcg atattaggaa tatccacttg gaaacggtta
     8581 gcttgagcgt gaacccgtgt tttccacgca tttagatctc gccagtctgc atcaccctcc
     8641 aaacgcagtt cgctttgttt ggtttgtaat ttaccgctta aagtcgatgt tgccccgtgg
     8701 aaattcattg ctaaattccc acctgtaata tcaaacggca ttgtaacaga gcgagctttt
     8761 aactctgtaa cgtttagatt tccgtgcaat aacggagagg ttgcggtgcc gctcacggta
     8821 agacgagcat tcacattgcc atcaaccgaa tcgccccgtt caagtagcgg tcgaatcagc
     8881 tttaagctta attggtcaag atgaatattg ccggataacg cacgagcctt acttaaatct
     8941 ttcatcacta aatcagtcga aagtctgccg ttattttcga cccttaaatc agatttaagg
     9001 gttaaattat tgtcagacat tttcagatca attttaagcg gtgaaacggt gagtgggaaa
     9061 ctttttcccc cctccatttt ttgaataaat ttaatcgcat tagaggttaa atccagattc
     9121 acttgaggct gtttgttttt aaaccaagct gcatcgcctt tggcattcac aatccctgaa
     9181 agctggctgt ttttctccaa aaattgttgc aataccgcta aatcaaagtt acggatttca
     9241 aaaggcactt taccctcaac accggcatta aatgcagtcg ggaaacaaag attaattttc
     9301 cggttatgcc aacaatgtgc ggaaatattg gcgttaatgg ctttattgtc atatttcaca
     9361 ttcactgctt tatctgcttg gaattgacca aactcggtgg attgaatcga aacttggctt
     9421 aattgccctt cccaaatttc tttcaaacgg tcaaattttc cagaaatttg caaatcagca
     9481 ccaaccggat tgccttttgc acttaatttc aagctatgat tttcttcatt tccttttagc
     9541 aataaagtgg catttcccac tttgatttca ttataggcaa attgacgtaa ccccaaggtt
     9601 aaatcccctt gaatggtttt ctcagtggta attttgcctt ttgcggttaa attttgcagt
     9661 ttaaattgct catagcctac atttgaggcc actaaatcta aatcaatgtt aggttctgaa
     9721 accttacccg ataatttggc attaccattc acgctggctt ttaaattcgg cactaaccct
     9781 tgcaaattag gggctttaat atccgcatag aaatcagatt tttcgcctaa cacgcctttt
     9841 aaatcgatct tattttcacc atacaccagc gataagcccg gaacatctaa aagttgttga
     9901 tgatcggctt ttaaattacc gcttaagtgt agatttttct gtaataacga acctttaata
     9961 tcaatattcg agacgtccgc tttccatccg ctagctgaat tgccccgtcc tgcataacct
    10021 tcggaagata aagaaccgga caataccgcc ggccagtctg ccagtaggga tttagtgtta
    10081 atatgctgaa gtttcaaatt tgaacgccac gcaacgccct cgctccaatc cactaaaccg
    10141 tcgatcttcg ccgtaccttc cagcgtattg agacttaaat cttgtatatt aaaatgggtt
    10201 aattcccctt tgccagttaa actagccgag cttgcaggca cgcccattcc tttggcactg
    10261 actttagcct ccaaagcgta atccaggaga ttgccattaa gcctcatggc gatattctct
    10321 aaactcagca catcaccatt ttgctgagga gcaaacggat aacgcattga ctcactcttc
    10381 agcgataaat caaagggagt tttcgcctga gccagtgcaa cattgccctc caacgaggcg
    10441 ctaattgcac cagccgtctt cacttttagg ctggttttgt catatagctc accggaaaga
    10501 gaggcttcaa tttgattgaa cggcaatttt actttcgccg tttttgcctc gtgaccactt
    10561 agcgtccaac ttagcggata attatcttgt aacgataaag aaccgcttgc ggttagatcc
    10621 ccttggtcgc ttttgaaatc taaacttttt aggttgatat gctgatcttt tgcttgagcc
    10681 tgaagctgta aagaggcaac atttaacaat gagatcggct caatcaaatt ccctttttca
    10741 tctttagctt tttgagcaat cgctacattc gcaatatcaa tctgttcaat attgagatca
    10801 agaggcaaac taaagcgaat atttttatcc aataacggct gtgctaattg tgctttaatc
    10861 gctgcccaat ccactttatt atccacctgt tcggcctgtg caacagtttt tctctgtaat
    10921 tggtgaaagc cctctacgac tttttcactg gttttttcca ccgcctcttg aatcacttta
    10981 tcagcaatct cttgtggatt tgtcgctgat aacgcctctg tttttgcatt tttttgtgca
    11041 aaatcgaccg cttgttcagt atcagtttcg tctaacttta aggctaaaag cagatttagc
    11101 ccctctaact gtgtcgggtg aacggtaata gcccgccctt taccagaaag tgcagtgtgg
    11161 aaatgattaa gatgaatatc catatcatca actttgacct tgatattctc taaattgata
    11221 ttttgagctg aaatccccaa tggcaaattt aattcggtga aaggttcggt ctcttctttt
    11281 ggctgagaag ggggtaattt agtcgtatca atcaacacct ctgtatcttt aaggctgaga
    11341 ttattcaaac acatttcata gtggagcaag cagctaaaac caatatgcag atctgcttgc
    11401 ccaaccgtta cattcacacc gtccatcaca aatcgggcat cagaaagctg taacccatct
    11461 tgcaggctac cttgcacttg cccaagttgt aatggctcta cgaatttatc tacccagctt
    11521 aacactttac gttgcccgta acctgtgcat agaaagagaa tggcgagtaa aagtagaata
    11581 aacgtcagac aaaagccgtg cttcaaaaac cgccactttg attttttagg ctgtgttgct
    11641 tgtggctctt gtgctgagtc cgtttgattt gtggctgttt gtttattttc gtcagtcata
    11701 atcgtgcata tttatgaggt gataaaaagt aaacaagcgg tatgcgaaat tttactgaaa
    11761 ttcgaccgct tgttttcatt tacagatcgg aacctaaacc aatataaatt tgtattcctt
    11821 tggaattatc tggtgatttt accggcgtgg cgacatcaaa tttaatcgcc ccgataggtg
    11881 atgcccaacg cacccctaag cccgtaccgt agtagagatc ctgagttttg aatttattcg
    11941 atgccaagcc tgcatcataa aaaattgcac cccaccaatt agggtaaacc tgatactgat
    12001 attctactgt gcctgtggct aaatgagagc ctccgacacg tttgccatta ctcggatcac
    12061 ggggggaaat atccttatag ccaaagcccc gcacactcat atcgccaccg gcaaaatagc
    12121 gtaacgccgg tggaatacgt tcaaattgat tggctttcaa ataccccaac tccgccctta
    12181 aatagaaccg atggttatca aagtaagttc tcgcccaaga tgtcgaggct ttataactat
    12241 aaaagtttac atctgaacct actgcacgac tcccccagtt taccgttaat ttttgtgtat
    12301 ccccccataa tgggtaaggc ttgccatctg ttctggttcg attcaatgat gccgttgggt
    12361 aaactaataa ggttttaaat cgatcattag cttgagtaaa agaatcgtaa cgggctttta
    12421 aaccaacaga aaatgaccaa ccggtttcgt gagtccagaa acgttgtaag ccaagggtgg
    12481 cagcggttga ttttgtatcg ttttgatctt cgttttctaa agtgccggat aattggtaat
    12541 aataatgtag cggatcttct ctaagtggaa tattataacc aaattcaaat gtctgctccg
    12601 gcttagaaac gtacgttcgg ctttcaatac tatgacctcg gctatttaac caaggtttct
    12661 tccagttaag ctgtaacctt gggccaactt cagtttcgta gcctatccca atttccactt
    12721 cattgcgttt tttaggctga aataacacat ttaaatccac taatttatcc tgttcattta
    12781 aatgtggctc aaccatcact gatgaaaacc aattactgga aaggtaatct tgggttaaaa
    12841 tcgaaagatc gttagctaaa tatggctcac cggaatgaat tttaagaata ttttgcaaat
    12901 attcttcttt gatttggcta tcaacaaacc ggatttgtcc ataatggtat cgttttccgc
    12961 tatcatagcc taaacgccaa tccgctttat gatcggtcgg ataaacttcc aaacggtgat
    13021 aaagccaatg accgtcaaaa taccctttac taaaagcggt actttcaata tcacctttaa
    13081 aattatcata ggttttatgg tttaaacgac taccttgttt tggggcttta ctgactagat
    13141 gagcgaaatc ttcgtccgtt tttgcatcgc cttgcaaaac aatatcggtt tcatcaattt
    13201 ttaccgtctc tttatctagc tcaacattta atactaagag cggtttcttt ccctcttgag
    13261 gtagctgcac aaattggtat cggctattat aatagcccaa ggctctcaga gctttatcta
    13321 ctgtggtttg caccaaatat tgataacgct ctgaaccatc tgcatattca ttggcaattt
    13381 gatctaaata tagctccaca tttttcttgg catctttacc ctgaatgcct ttgacttcta
    13441 aagtgactaa tggctctatt tctggctcat catcactatc ttccgctaat ttttcttgca
    13501 gattttcaac tcgctcacga tctacgtcag acagcctttg ctcttgattt gcttgtgcca
    13561 ttgaagcaaa agccactaaa cagcagaatg ttaaaaaatg tagttttgta ttcattagta
    13621 acctttttat tcttttggaa tgccacgcaa aagcggaata ctgtcataag gcggaacaga
    13681 acttaacgct ggctcttgct caaagagcat aatgaatggt ttgtcaggca ctgttttttc
    13741 attacgccac aagtttccaa cactcaccaa ttcaatatct tgaggtagtt gtgctaaatt
    13801 ttgcttcagt acactaatcg tattcttgcg agggtgtcct atcaccaccg ctaccccgtt
    13861 ttttcgtgcg tgattaattg catgtgcaaa ctgtttttgt acatcagcaa gcagatcgct
    13921 atcatctaaa aaaatgtctc tctccagcgt attaatacca aattgacgag ccgttttagc
    13981 cgccacacta ctgccaatag ttttactgtc taaaaagaaa agcgtatttt cttttaacac
    14041 tttcaacaaa tgttgcattg tagcagagtc tgaagttgct ccactgccca tatggttatt
    14101 taaaccaata gcatatggta cttgaccacg agaagtatga ataagtttcc gaattttctc
    14161 ttcgttatca ccaatatgaa tacccccctc ttcaattggc tgtttcgatt taggttccat
    14221 tggcaaatga atcaaaatat cccgtttttg gttataagcg tcctttgccc gttctgttgc
    14281 atagggtgca acaggaataa tcgccacgct taccgccttg ggtaaggcta agatttctcg
    14341 atcttctttt attcgatagc ccacatcatc aattacaatc gccatttgag ctgcttgtac
    14401 aagcggtgta aaaagcacaa acatttgcaa aaaaatgtta aaattcaacc gcttgttaat
    14461 ttgtttaaac atctatttca ccaaatttag aggattaatc ggcgtgcctt tacgggtaac
    14521 accaaaatag agtgcagaac ggctttgtcc cccactgtta ccaaccttcg caataacctg
    14581 tccgccttgc actcggctac ccttgctgac tgaaatagat tggttatagc cataaaggga
    14641 aatatcacca ttgccgtggt caatcgcaac catattgcca taccctgcaa gccattgagc
    14701 cattatgact cgcccgctcg ccattgctct aaccgaagta ccggcagaag caccaatcac
    14761 tacaccgtgc caattattac caaaaggagt gataatattg ccagacaccg gcatcgtata
    14821 tcgaccagcc ttgatcggtg ttctctcaac attctcagtt gttttggact gaccggattt
    14881 tgcctgtttt tcccgctgtt gttcacgttt ttctgcttgc tgagcctctc tttgcgcttg
    14941 ttctaattgt tgttttagtg cctgttcatt gctgcgtaaa ttctctaatc ggctttgatc
    15001 ctgctcaagc gttttatcga ttaaacgtaa ggtactttca cgctggcttt gtactttctt
    15061 taaatctttc tcttgtttct tttgttcatt aagttgcgtt tgatgatctt tttgctggcc
    15121 tttcaattca tcacgtctgg ctttaagatc agcttgggtt ttacgaattt caacgatcgc
    15181 atcaatgcga atattattca tatgctgata ataagcggtc attctttccg cattttttgc
    15241 ctcttcagac attaaacgct ctaagaccga agggttcacc ccagaacggt aggcagagtc
    15301 caactgctct tttaattttt ctttctgctg tttttccaac ttttctaaac gggcaatttc
    15361 agtctcagtc gctttaatgg tctggcgaac ttccgttaaa gacatttcgg ttttttgtaa
    15421 tttatccaac accttcccca tttctacttc ttggtttttt agggtagatt gcaacgcatt
    15481 acgtttttgc ttttgttcat taatttttga ggtttgctgt tggatttttt gctgaatctg
    15541 attaagatta tttgcaaaag aaaaaggggt agaaaagctt attaccccac tgaaaatagc
    15601 agtccaacag taagaattta ttcgtttcac cagcatacct tt
//
LOCUS       DANLXD010000061        15639 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.061, whole genome shotgun sequence.
ACCESSION   DANLXD010000061 DANLXD010000000
VERSION     DANLXD010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15639)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15639)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15639
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.061"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            96..482
                     /locus_tag="PXD18_001571"
     CDS             96..482
                     /locus_tag="PXD18_001571"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301998.1"
                     /translation="MTNQKFINSSLTLAFFTLISFSTAYCYAWGIAAFHGYPWWHVEV
                     GNAGIARALAYVFGTFLTIFLFYLIGYALVNKVFKLHYFKYLGWLRVSVLVTIFSLPV
                     MISFYLFIGKVPMYLHLLYLGTTTSI"
     gene            557..826
                     /locus_tag="PXD18_001572"
     CDS             557..826
                     /locus_tag="PXD18_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6301999.1"
                     /translation="MLSEERFGFFYIFIFIYFSLLSLSIGYIRPELRTTYDYLEIENK
                     RYYVLSIHRNNIYVLGEKTKDNDEFLFFNQDTLKYYRINITKMPN"
     gene            complement(880..2025)
                     /gene="lldD"
                     /locus_tag="PXD18_001573"
     CDS             complement(880..2025)
                     /gene="lldD"
                     /locus_tag="PXD18_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent L-lactate dehydrogenase LldD"
                     /protein_id="HDL6302000.1"
                     /translation="MIISSANDYRRAAKRRVPPFMFHYADGGSYAEQTLRRNVSDLED
                     IALRQRVLKDMSQLDTGIELFGEKLSMPVTLAPVGALGMYARRGEVQAAKAADNKGIP
                     FTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPT
                     PGARYRDMHSGMSGPYKDIRRVLQAMVHPFWAWDVGIHGKPHTLGNVSNYMGKPIDLN
                     NYIGWLTDNFDPSISWKDLEWIREFWDGPMVIKGILDPEDAKDAVRFGADGIIVSNHG
                     GRQLDGVLSSAKALPSIADAVKGEIKILADSGIRNGLDVVRMLALGADCTMIGRSFVY
                     ALSAAGQAGVENLLDIFLKEMKVAMTLTSNAKISDIGRDALVDLSNL"
     gene            2637..3281
                     /gene="rppH"
                     /locus_tag="PXD18_001574"
     CDS             2637..3281
                     /gene="rppH"
                     /locus_tag="PXD18_001574"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HDL6302001.1"
                     /translation="MIDFDGYRPNVGIVICNKHGQVLWAKRFGQNSWQFPQGGINEGE
                     NIEAAMYRELYEEVGLSKKDVRLLWASKYWLKYKLPKRLVRNEGSGPVCIGQKQRWFL
                     LQLIGDESLINLKTTKNPEFDGWRWVSFWYPVRQVVSFKRDVYRKAMKEFAQVLQNNI
                     QKATDDKTGEKPRIERGETSPHTYKKTSQDSAKAYKREARKPYRPWHQHNQKGK"
     gene            3283..4071
                     /locus_tag="PXD18_001575"
     CDS             3283..4071
                     /locus_tag="PXD18_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDL6302002.1"
                     /translation="MTILLSCLFLGVFVGFLAGLFGIGGGLIIVPSLVFLLPMAGVPP
                     EYIMSTALGTSFSTIIITAFASAQRHHKLGNVDIQTSKYFIPALMVSVFLSGLVVSRL
                     DPQLMSRIFAVMVLYLAGKMIFSIKRAPKNKPLTVQTTIIGGSIIGALASMAGIAGGA
                     FIVPFLNDRGLEMKRAIGTSSFCGAFLGLSGTISFIVSGWGLEGMPDYSLGYVYLPAL
                     FGITATSFFTSKMGASAANALPVPMLKKAFAVLLVCIAINMFLK"
     gene            4079..4876
                     /gene="lgt"
                     /locus_tag="PXD18_001576"
     CDS             4079..4876
                     /gene="lgt"
                     /locus_tag="PXD18_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HDL6302003.1"
                     /translation="MNEQFIQFPQISPIVFEIGPIALRWYGLMYLAGFAFAYWLGMRR
                     AKNSNGVWTTEQVDSLVYTCFWGVVLGGRIGDVFFYSFDRFLQDPLYLFRIWEGGMSF
                     HGGLIGVIVAMIWVSYRQKRNFWQTADFIAPLVPFGLGMGRIGNFINDELWGRVTDVP
                     WAVLFPSGGYLPRHPSQLYEAFLEGVVLLFILNWFIQKPRPAGAVSGLFLIGYGTFRF
                     IVEYFREIDHNVNTTADLITRGQLLSLPMIIGGILIMAWAYKVNKVK"
     gene            4963..5631
                     /locus_tag="PXD18_001577"
     CDS             4963..5631
                     /locus_tag="PXD18_001577"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HDL6302004.1"
                     /translation="MSKKYKVIGFDLDGTLINTLPDLTLVANSMFLEAGLPTVTQEKV
                     LTWIGKGADIFFQNAVAHTGRIFQADELVKMRVSFDKYYATYVCEESTLFPNVKETLE
                     ILKANDYPLVVITNKPTKLVEPVLSAFGIYHLFDETLGGQSLPKIKPHPDPMFFICEK
                     FGITPSELLFVGDSENDVIAAKAAGCDVVGLTYGYNYNVPIEQSNPTFVTSEFKDVLK
                     IVGL"
     gene            5701..5961
                     /locus_tag="PXD18_001578"
     CDS             5701..5961
                     /locus_tag="PXD18_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HDL6302005.1"
                     /translation="MPTIALRQVGGSVAMVIPPAFLEALKLSVGSKVDLSLNDNQLVI
                     NPARPKVKYSLEELLRQSDFEAARNEESQSWLSEPAIGKEIL"
     gene            5958..6290
                     /locus_tag="PXD18_001579"
     CDS             5958..6290
                     /locus_tag="PXD18_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HDL6302006.1"
                     /translation="MKRGDIYWLDLDPTLGHEQSGFRPVVIVSVTAFNLASKLPVVVP
                     ITNGGAFAERLGFAVSLKDAGLKTTGIIRCDQPRTVDIAQRHGKFIEALPESLLDEIM
                     ARVSVIFE"
     gene            6417..7448
                     /gene="trpS"
                     /locus_tag="PXD18_001580"
     CDS             6417..7448
                     /gene="trpS"
                     /locus_tag="PXD18_001580"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HDL6302007.1"
                     /translation="MSKPIVFSGVQPSGELTIGNYLGALRNWVKMQDDYDCVYCIVDQ
                     HAITVRQDPESLRKSTLDVLALYLACGIDPNKSTIFIQSHVPEHAQLAWVLNCYTYFG
                     EMGRMTQFKDKSARYEENVNVGLFTYPVLMAADILLYQANQVPVGDDQKQHLEITRDI
                     ANRFNALYGKKDSEGNLIEPVFAVPEVFIAKSGARVMSLLEPTKKMSKSDDNRNNVIG
                     LLEDPKAVAKKIKRAMTDGDEPPVVRYDVQNKAGVSNLLDILSAITGKTIAELETEFE
                     GKMYGHLKTEVADKVSELLTNLQERYHHYRQDEALLEKIYREGAEKARAQAKATLDKV
                     YELVGFVRY"
     gene            complement(7512..8267)
                     /locus_tag="PXD18_001581"
     CDS             complement(7512..8267)
                     /locus_tag="PXD18_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDL6302008.1"
                     /translation="MKFIKKLSYSVFLATVITACATTESINQEAAQSYAQVKTQARQQ
                     NAIDNSSATAKRIHTVFHKMKPYAERANQTGVPFHWEITVLKSDELNAWAMPGGKMAF
                     YTGLVERLNLSNDEIAVVMGHEMAHALKEHGKSDRTVSAITSIVGAIADVAVTASTGV
                     STEGLLSTGVDLIATKPFSRSQETEADEVGLILMAESGYNPSAAPNVWVKMSKANGDS
                     GLSIFSTHPSNADRQENLARLVPEAMKIYNARK"
     gene            complement(8323..8850)
                     /gene="ppa"
                     /locus_tag="PXD18_001582"
     CDS             complement(8323..8850)
                     /gene="ppa"
                     /locus_tag="PXD18_001582"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HDL6302009.1"
                     /translation="MGLELVPAGKELPDDIYVVIEIPANSDPIKYEVDKETGALFVDR
                     FMATAMFYPANYGYVNNTLSSDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGG
                     DAKVVAVPHTKLSKEYDHIKDVGDLPALLKAQIQHFFESYKALEAGKWVKVEGWGDVN
                     EARQEILESFERAKK"
     gene            9067..9142
                     /locus_tag="PXD18_001583"
     tRNA            9067..9142
                     /locus_tag="PXD18_001583"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9100..9102,aa:Lys,seq:ttt)
     gene            9165..9240
                     /locus_tag="PXD18_001584"
     tRNA            9165..9240
                     /locus_tag="PXD18_001584"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9198..9200,aa:Lys,seq:ttt)
     gene            9262..9337
                     /locus_tag="PXD18_001585"
     tRNA            9262..9337
                     /locus_tag="PXD18_001585"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9295..9297,aa:Lys,seq:ttt)
     gene            9430..10464
                     /gene="mltG"
                     /locus_tag="PXD18_001586"
     CDS             9430..10464
                     /gene="mltG"
                     /locus_tag="PXD18_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HDL6302010.1"
                     /translation="MLKKILIALGLAGVIACGGLFYGYQKLTSLAEHPITVQPNQLFV
                     LEKGVSSQKLAALLEEQGIVTHDDADLIPYLMRLYPELSKFKAGAYSLAGLTTVKDLL
                     AHLSSGKEVQLNVQFIEGKTFKIWREQLAKADYLQHTLQGKSEKEIADLLGIPHEKIE
                     GWIAPDTYNYTPNSTDLALLKRAYQKQKTALEQAWKNRAENLPLATPYEMLILASIVE
                     KETGIATERPQVASVFINRLRNNMRLQTDPTVIYGMGDRYNGNIRRKDLEEATPYNTY
                     QIDGLPPTPIAMPSEASIKAVANPDNTPYLYFVADGTGGHKFSKTLNEHNKAVAEWIQ
                     IERKRKNEQK"
     gene            10475..11095
                     /locus_tag="PXD18_001587"
     CDS             10475..11095
                     /locus_tag="PXD18_001587"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HDL6302011.1"
                     /translation="MRGKFIVIEGLEGAGKTTAHQVILKELEQAGINDVVMTREPGGT
                     PLAEKLRHLIKHETEEAINDKAELLMLYAARVQLVENVIKPALAEGKWVLGDRHDMSS
                     QAYQGGGRKLDRHLLETLKESVLGTFEPDLTIYLDLDPVIGLERARGRGELDRIEQQS
                     LDFFYRTRERYLELTQHNDKAVIINAEQPIEQVTADIQQVIRNWLK"
     gene            11095..12072
                     /locus_tag="PXD18_001588"
     CDS             11095..12072
                     /locus_tag="PXD18_001588"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HDL6302012.1"
                     /translation="MYPWLESTYQQLTDSFLQGRGHHALLFKTDVGLGTDTLIYKVAE
                     WLLCSQKLRHQPCLECKSCLLMQSNNHPDFHILEPIEDKDIGIDQVRELIYKLQNFAQ
                     QGGNTVVYIRGVDRLTEASSNALLKTLEEPRENVYFLLEAPLQATVLATIQSRSQTWV
                     LYAPQASEVMAWLQTQFPAISTDDLEIALRLCHSRPLICKNFIENDRLQQRKTFLQTF
                     WRFYKSHDVFLLFQAFAQEKELILQQLEWLESFFSDALKAKMAISHGWLNPDLQNGIL
                     PFSQQLTTHGLLKGHQILQQTQRDLTEINAVNPELMLLDCLTKLVLVFE"
     gene            12203..12445
                     /locus_tag="PXD18_001589"
     CDS             12203..12445
                     /locus_tag="PXD18_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HDL6302013.1"
                     /translation="MARTTSVTLGEPLNDFVNEMVASGRYGSTSEVVRTALRMLEEKE
                     QYLAQLRQAIDDGDASGYATETIDEMMLRVKAELNV"
     gene            12438..12722
                     /locus_tag="PXD18_001590"
     CDS             12438..12722
                     /locus_tag="PXD18_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6302014.1"
                     /translation="MYKLSAQALRDQEKLFRYSISQFGVQQTESYFADLKHILNLLAD
                     FPTMGTSAEYIRGGLRMHTHQSHTIYYRIKADHIFIVRILHNQMNHKRYI"
     gene            12727..13515
                     /locus_tag="PXD18_001591"
     CDS             12727..13515
                     /locus_tag="PXD18_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchF/TatD family DNA exonuclease"
                     /protein_id="HDL6302015.1"
                     /translation="MKDLFIIDSHCHLDSLDYETRHKNVDEVIENAKARGVHHFISVC
                     TTVGRFEAMKNLTAHRNDVSLSCGVHPLNVEDEPFDYDKLFQFAQDPKVVAIGETGLD
                     YHYTPETKALQQSLFVQQIEIANKLNKPLIIHSRSARQDTMDMLEQNNAEKCGGVLHC
                     FTEDWAMAKRALDIGFYISISGIITFRNAEELREVVRKVPLDRLLVETDSPYLAPIPY
                     RGKPNQPAYVRETCEYVATLKGVSTEELARITTENVQHLFNIKL"
     gene            13525..14046
                     /locus_tag="PXD18_001592"
     CDS             13525..14046
                     /locus_tag="PXD18_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1523 family protein"
                     /protein_id="HDL6302016.1"
                     /translation="MRAILKYFLILVSLSFFIVLGGAVNYAMPSYEDTVVTGMEVRRM
                     DKDGIISKANPADGEVRDVYFLFTEDPETKKVMVYRNEDTGWGLPPYFKFGSADIQAK
                     AQAYANEKQRVQIKYYGWRINWLNEFRNIVSIKPLEEAETVSKPIMSYVLYAVLAFLF
                     FLSVQFIRGIFKD"
     gene            14121..14822
                     /gene="lpxH"
                     /locus_tag="PXD18_001593"
     CDS             14121..14822
                     /gene="lpxH"
                     /locus_tag="PXD18_001593"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HDL6302017.1"
                     /translation="MTYYFIADLHLNENQPEITHLFLQFMQEKALLAEAVYILGDLFD
                     FWIGDDEQSELISTVKQAIKTLTTSGTKCYFICGNRDFLIGKRFSEQTGMVILPDYHV
                     IDLFGTSTLLCHGDTLCTDDVKYQQFRKKVHQKWRQAIFLMFPLSWRIRIAEKIRSKS
                     KQEKRDKSAEIMDVNAEVTAQIVAKYNTTQLIHGHTHRQAIHQHNGFTRIVLGDWKEN
                     YASILSVTEQGAEFI"
     gene            14819..15609
                     /locus_tag="PXD18_001594"
                     /pseudo
     CDS             14819..15609
                     /locus_tag="PXD18_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618283.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
BASE COUNT         4609 a         3347 c         3232 g         4451 t
ORIGIN      
        1 gttctcctct aaacaaagga gttgggtgga agctaaactc agtctgcttt cttgtgtttc
       61 atctttaact aagtaggtgc aatctattta ctgttatgac taatcagaaa ttcatcaact
      121 cttctcttac tctcgctttc tttactttaa tctctttttc taccgcttac tgttatgctt
      181 ggggtattgc tgcttttcat ggctacccgt ggtggcatgt tgaggttggt aatgccggta
      241 tagctcgcgc actagcctac gtttttggca catttttaac tatctttctt ttttatttga
      301 taggatacgc tttagttaat aaagttttta agctgcatta ctttaaatac cttggctggc
      361 tacgggtgag tgttcttgtt actattttta gcttgccagt aatgatcagt ttctatctgt
      421 ttattggcaa agtgccaatg tatttacacc tactctatct agggacaact acctctatct
      481 agggacaact accctatcag tattattatt tcacaaacat tggggccacc gcgtattcca
      541 cttagatatt caaaaaatgt taagcgaaga acgcttcggt tttttctata tttttatttt
      601 catctatttt agcttacttt ctttgagtat tggctacatt cgccctgagc tgagaacaac
      661 gtatgattat cttgaaattg aaaataagcg atattatgtc ttatctattc atcgcaataa
      721 catttatgtg ctgggcgaaa aaactaaaga taacgatgaa tttctctttt tcaaccaaga
      781 tacattgaaa tattaccgca ttaatattac caaaatgcca aattagccta tctaaaataa
      841 caatccgcac ctaaaacgtg cggattgtgg ctatttgagc taaagattac ttaaatctac
      901 caaagcatct ctgccgatgt cgctaatttt agcattgctg gtaagtgtca tcgccacttt
      961 catttcttta aggaagatgt cgagcaggtt ttccacaccg gcttgaccgg cggcgctaag
     1021 agcgtaaaca aaggaacgcc cgatcatcgt acaatctgcg ccgagagcca gcattctcac
     1081 cacatctaag ccgttgcgga taccagagtc ggcaaggatt ttgatctccc cttttactgc
     1141 atcggcaatg cttggcaggg ctttggcaga agaaagtacc ccatctaact gacgaccacc
     1201 gtggttggag acgatgatac cgtccgcacc aaatcttacg gcatctttag catcttctgg
     1261 gtcgagaatg cctttgatca ccatcgggcc gtcccaaaat tcacgaatcc actctaaatc
     1321 tttccacgaa attgatgggt cgaaattatc ggtcagccag ccgatgtagt tgttcagatc
     1381 aatcggttta cccatatagt ttgacacatt gcctaacgtg tggggtttac cgtgaatgcc
     1441 cacgtcccac gcccaaaacg ggtgaaccat tgcctgcaac acacggcgaa tgtctttgta
     1501 tgggccgctc attccggagt gcatatcacg ataacgtgcg ccgggggtcg gcatatctac
     1561 ggtaaacact agcgtggaac aaccggcggc tttggctcgt tccaatgcat ttttcataaa
     1621 gccccgatct tttaacacat agagctgaaa ccacatcggg cgtttgattg ccggtgcaac
     1681 ctcttcaatc gggcaaatag agacagtgga aagggtaaac ggaatacctt tgttatctgc
     1741 ggctttggcc gcttgcactt cgccacggcg ggcatacatt cctaatgcac cgacaggggc
     1801 gagggtcacc ggcatagaca gtttttcgcc gaacagctcg atgccggtgt ctagttgcga
     1861 catatctttt aacacacgtt gacgcagggc gatgtcttcc aaatcgctca cattacgacg
     1921 taaggtctgc tcggcgtaag aaccgccatc cgcataatgg aacataaaag ggggaacacg
     1981 acgttttgcc gcacggcggt aatcgtttgc agatgaaatg atcatttaaa acctcataaa
     2041 tcattaagaa aaaagtgcgg ctattctact ttaaaataaa aataagaatt actactattt
     2101 gcaaaatatg agaaatagat cacatttttg ttacaaacca attagcataa aaatacaatt
     2161 gcacaaaaag caaccaacaa aacaattgat tattcacaga ttgaaaagat gacactaact
     2221 atttgattta attataattt atggaaatag caaaaggctg atttgagtta ttcacgccta
     2281 atttgaaaaa ctatcacatc tttatccaca aatggtgggg ataactctgc tttatttgcg
     2341 aagcaaaaat tgccctgctt attcatttta aaatttaaac ttattttgac gagaaaaaac
     2401 gcaacaactt gatctttatc cagatcattg cttaagaaaa agatcgcatt tttagatctg
     2461 attaattgct ctgttttaca acgttccgcc tgtttatcct caacttatac cacttatatt
     2521 caatagttat ccacaaagtt attcacaagc ggttatattt tatggttttt ttgcaaatca
     2581 acccaaagta tgaaacaatt ctcccattct agaattttta tcaattaggt ggtcgagtga
     2641 tcgatttcga tggctaccgc ccaaatgttg gaatcgttat ctgtaataag cacgggcaag
     2701 ttctgtgggc aaaacggttt ggtcaaaact cttggcaatt tccgcaaggt ggaattaatg
     2761 agggggaaaa cattgaagca gcaatgtacc gtgagcttta tgaagaggtc ggcttaagta
     2821 aaaaagatgt acgattgctt tgggcgtcta aatattggct aaaatataaa ctgccaaaac
     2881 gcttggtacg taatgaaggc tctggtcctg tctgtatcgg gcaaaaacag cgttggtttc
     2941 tactgcaatt aatcggtgat gaaagcctga ttaatttgaa aaccacgaaa aatccggagt
     3001 ttgacggctg gcgttgggtc agcttttggt atccagtccg ccaagtggtc tcttttaaac
     3061 gagatgttta tcgcaaagcg atgaaagagt ttgcacaggt tttgcaaaac aatattcaaa
     3121 aagcgactga cgataaaacc ggtgagaaac cacgcattga gcgtggcgag acttcgcccc
     3181 atacttataa aaaaacctct caggattctg ccaaagccta taaacgagaa gctcgtaagc
     3241 cttatcgtcc ttggcatcaa cataatcaaa aaggaaaata agatgactat tttattaagc
     3301 tgcctttttt taggggtgtt tgtcggcttt ttagccggct tgttcggcat tggtggtggg
     3361 ttaatcatcg tgccgagttt ggtcttccta ctgcccatgg caggtgtacc gccggaatat
     3421 ataatgtcca ccgcactcgg cacatcattt tcaaccatta ttattaccgc ctttgcatcg
     3481 gcacaacgcc atcataagtt aggcaatgtc gatatccaaa ccagtaaata ttttattcca
     3541 gcgttgatgg tttcggtttt tctatcgggc ttggtggtaa gccgcctcga tccgcaactg
     3601 atgtctagaa tttttgcggt aatggtactt taccttgcag gtaaaatgat tttttcaata
     3661 aaaagagcac cgaaaaataa accacttacc gttcaaacga cgataatcgg aggttcaatc
     3721 atcggtgcgt tagccagtat ggcagggatc gcaggtggag cctttattgt accattttta
     3781 aacgatcgag gcttagaaat gaaacgtgcc atcggcactt cctcattttg cggagcattt
     3841 ttaggtttat ctggcacaat cagctttatt gtaagtggct ggggcttaga aggaatgcct
     3901 gattattctc tcggttatgt ttatttaccg gctctgtttg gtattacggc aacttcattt
     3961 ttcacctcaa aaatgggggc aagtgccgcc aacgctctac ctgtgccgat gctgaaaaaa
     4021 gcctttgcgg tgcttttggt ctgtatcgcc atcaatatgt ttttaaaata aggacactat
     4081 gaacgaacaa tttatccaat ttccacaaat tagcccgatt gtgtttgaaa tcggtccgat
     4141 tgccctgcgt tggtatgggc taatgtattt agccggcttt gcctttgcct actggctggg
     4201 aatgagacgg gcgaaaaatt ccaatggagt ttggacaacc gagcaagtgg atagcttagt
     4261 ctatacttgc ttctggggcg tagtattagg tgggcgtatc ggcgatgtgt tcttttatag
     4321 cttcgaccgt ttcttacaag atccgctcta cctctttcgc atttgggaag gcggaatgtc
     4381 ctttcacggc ggtttaatcg gcgtcattgt agcaatgatt tgggtttcct accgccaaaa
     4441 acgcaatttc tggcagacag cagattttat cgcaccgcta gtaccgttcg ggctaggtat
     4501 ggggcgtatc ggcaatttca ttaacgatga actttggggg cgtgtaaccg atgtgccttg
     4561 ggcggtgtta tttccaagcg gtggctatct tccccgccac ccgtcacagc tttatgaagc
     4621 ctttttagag ggtgtggtgt tactctttat cctcaactgg tttattcaaa agcctcgccc
     4681 ggcaggtgcg gtttcagggt tatttttaat cggctacggc acattccgct ttattgtgga
     4741 atacttccga gaaatcgacc ataacgtcaa taccaccgca gatttaatca ctcgtgggca
     4801 actactctct ttaccgatga ttatcggcgg catactgatt atggcgtggg cgtataaagt
     4861 aaacaaagtg aaataaacgt aggggcaagt caatatttgc cctcattaca aaaattgcaa
     4921 aaaatttgca gaaaacgacc gcttgtgttt gaaggatata ctatgagtaa aaaatacaaa
     4981 gtcatcggtt tcgacttaga cggaacgcta atcaacaccc tccccgatct cactcttgtc
     5041 gccaattcaa tgtttctaga agccggtttg ccaacggtta cacaagaaaa agtgctgact
     5101 tggatcggta aaggggcaga tattttcttc caaaatgcgg ttgctcacac cggcagaatt
     5161 ttccaagccg atgagttggt gaaaatgcga gtgagctttg ataaatacta cgccacctat
     5221 gtgtgcgagg aaagcaccct tttcccaaat gtgaaagaaa ccttagaaat cctcaaagca
     5281 aacgactacc cgctggtggt gattaccaac aaaccgacca aattagtcga gccggtgctt
     5341 tccgctttcg gcatttatca tttattcgat gaaacccttg gtgggcaatc gctccccaaa
     5401 atcaaaccgc accctgaccc gatgtttttt atctgcgaaa aattcggcat taccccatca
     5461 gaattacttt ttgtcggcga ctcagaaaat gacgtgattg ccgccaaagc cgccggttgt
     5521 gatgtggttg gactaactta cggctataac tacaatgtgc cgattgaaca atctaacccg
     5581 acttttgtga catctgaatt taaagatgtg ttgaaaattg tggggttata aagaaaacat
     5641 ttgttttctt ttgatgtttg ctttagactt tccgaaccta aagatttaaa ggagtaaagt
     5701 atgccaacaa tcgcattacg tcaggtcggt ggctcggttg caatggtgat tccgcctgct
     5761 tttttagagg cactcaagct ctccgtcggt agcaaagtgg atttgtcttt aaacgacaac
     5821 caactcgtga ttaatcctgc ccgcccaaaa gtgaaataca gcttagagga attattaaga
     5881 caatccgatt ttgaggcagc aaggaatgaa gaaagccaat cgtggttatc cgagccggca
     5941 ataggaaaag aaattttatg aaacgtggcg atatttactg gctcgatctt gatccaacct
     6001 taggacacga acaatcaggc ttccgccccg ttgtaattgt ttccgtaact gcatttaatc
     6061 tagccagtaa actgcctgtg gttgtgccga ttactaacgg tggagctttt gctgaaagac
     6121 tgggctttgc cgtttcatta aaagatgccg gcttaaaaac aacagggatt attcgatgcg
     6181 atcaacctcg cacagtcgat attgcacaac gccatggaaa atttatcgaa gccttacccg
     6241 aaagcctact tgatgaaatt atggcaaggg tttcagtgat ttttgagtaa gatacaagcg
     6301 gtctgatttg ctctattttt tgcaaaatca tcaataaatc tgaccgcttg tacttttatc
     6361 ccttcccaat aaccgttaag ataacctata tttttcaaat caaacgagaa gataaaatga
     6421 gcaaacctat tgtatttagt ggcgtgcagc cctcaggtga attgactatc ggtaactact
     6481 taggggcgtt acgcaactgg gtgaaaatgc aagatgatta tgactgtgta tattgcattg
     6541 tcgatcaaca cgccattacc gttcgtcaag atccggagtc gctacgcaaa tcaactttag
     6601 atgtgttagc cctgtattta gcttgtggca ttgatccaaa caaaagcact atttttattc
     6661 aatcccacgt gccggaacac gcccaattag cttgggtgct gaactgttac acctatttcg
     6721 gtgaaatggg gcgtatgacg caatttaaag ataaatcagc acgctatgaa gagaatgtca
     6781 atgtgggctt atttacttat ccggtattaa tggcggcaga tattctgctt taccaagcca
     6841 accaagtgcc ggtaggcgat gaccaaaaac aacatttgga aatcacccgt gacattgcca
     6901 accgtttcaa tgccttatac ggcaaaaaag attccgaagg caacctgatc gagcctgttt
     6961 ttgcagtgcc ggaagtcttt attgcgaaat ccggggcaag agtgatgtcg ctacttgagc
     7021 cgaccaaaaa aatgtcaaaa tcggacgata atcgtaacaa tgtgattgga ctattggaag
     7081 atccgaaagc ggtagcgaag aaaatcaaac gggcaatgac cgatggcgat gaaccgccag
     7141 tagtgcgtta tgacgtacag aataaagccg gtgtctcgaa tttattggat attctctccg
     7201 ccattaccgg caaaaccatt gccgaattag aaaccgaatt tgaaggcaaa atgtatggtc
     7261 atttgaaaac agaagtagca gataaggttt ccgaactatt aaccaatctg caagaacgtt
     7321 atcaccacta ccgccaagat gaagcattat tggaaaaaat ctaccgtgaa ggggcagaaa
     7381 aagctcgagc tcaagccaaa gcaacgttag ataaggtata tgaattagtc ggttttgtgc
     7441 gttactaaca cttaatgaaa aatgctcttg aggattcaag agcatttttg caaaaaagaa
     7501 ccgattgtca attatttacg ggcgttataa atcttcattg cttccggcac aaggcgggct
     7561 aagttttctt gacggtcagc atttgatggg tgagttgaga aaatggacaa gcctgaatcg
     7621 ccattggctt tactcatttt tacccaaaca ttcggcgctg ctgatgggtt gtagcctgat
     7681 tctgccatta aaattaaccc aacttcgtcc gcctcagtct cttggctgcg agagaatggc
     7741 ttggtggcaa tcaaatccac gccagtgctg agtaaacctt cggtgcttac gcctgttgag
     7801 gcagtcacag ccacatctgc aatagcacct acaatactgg taatagcgct aaccgtacgg
     7861 tctgatttac cgtgttcttt cagtgcgtga gccatctcgt gtcccattac cactgcaatt
     7921 tcatcgttcg ataaattaag tctttccact aaccccgtgt aaaacgccat tttaccgccc
     7981 ggcatcgccc acgcattgag ttcatccgat ttcaatacgg taatttccca atgaaaaggt
     8041 acaccagtct ggttggctct ttccgcataa ggcttcattt tatgaaaaac agtgtgaatc
     8101 cgcttagcgg tggcagacga attgtcaatc gcattttgct gacgagcttg ggttttcact
     8161 tgagcataac tttgagccgc ttcttggtta atgctttctg ttgtggcaca agcggtaatc
     8221 actgttgcta aaaaaactga ataacttaat tttttgatga atttcatttt atatcccaca
     8281 aaaaatgcca aacaaatttg cttggcattc aaaaataaat aattatttct tagcacgctc
     8341 gaatgattct aagatttctt ggcgagcttc gtttacatcg ccccaacctt ctactttcac
     8401 ccatttgccc gcttctaatg ctttatagct ttcgaagaag tgctggattt gtgcttttaa
     8461 taacgccggt aagtcaccta catctttgat gtggtcatac tctttactta atttggtgtg
     8521 tggaacagca accacttttg catcaccgcc ggcttcatcg gtcattttta acacaccgac
     8581 aggacggcaa cgaatcaccg aacccggttg taacggatat ggtgttggca ctaatacatc
     8641 aaccgggtca ccgtctgatg ataaggtgtt attcacataa ccatagtttg ccggatagaa
     8701 cattgcggtt gccataaagc gatccacaaa taatgccccg gtttctttgt ccacttcata
     8761 tttgattgga tcagagtttg ccggaatttc aattacaaca taaatatcgt ccggtaattc
     8821 tttaccggca ggaactaatt ctaagcccat tttggtttcc ttctataata ggtgaaataa
     8881 acggcgtgat tatagcctat tttcagaaaa agataaaagc ccgtttctct tttcattttc
     8941 cgccaacaaa tccggctaat tttttgctaa attgcttaca aaccgcacac tcaaccattt
     9001 ttcgataaaa aaaacttgcc aaagttttaa aaatccgtaa gatatgccct cgttacgcaa
     9061 gattatgggt cattagctca gccggtagag cagcggactt ttaatccgtt ggtcgaaggt
     9121 tcgaatcctt catgacccac cattaatctt caaaacacct ctaagggtca ttagctcagt
     9181 cggtagagca gcggactttt aatccgttgg tcgaaggttc gaatccttca tgacccacca
     9241 ttaatttcaa aactcctctg agggtcatta gctcagtcgg tagagcagcg gacttttaat
     9301 ccgttggtcg aaggttcgaa tccttcatga cccaccattt actcaaatcc catttgcaaa
     9361 tttttctgaa aaaacaaccg ctttatagta gaattcagtc aatttttatc acttttattt
     9421 tattcatcaa tgctaaaaaa aatccttatt gcattaggct tagccggcgt tattgcttgc
     9481 ggtggactgt tttacggcta ccaaaaactc acctctttag ccgaacaccc gatcacggtt
     9541 cagccgaatc aacttttcgt attggaaaaa ggcgtttcca gccaaaaatt agcggctctg
     9601 ttagaagagc aaggcattgt cacccacgat gacgccgatc ttatccctta tttaatgcga
     9661 ttataccctg agttaagcaa attcaaggct ggtgcttatt cactcgcagg cttaacgaca
     9721 gtaaaagatt tgctcgctca tttaagctcc ggcaaagaag tgcaacttaa cgtgcaattt
     9781 attgagggca aaacttttaa aatttggcgg gaacaactag cgaaagccga ttatttacag
     9841 cacacgctac aaggcaaatc ggaaaaagaa atcgctgact tactcggcat tccacacgaa
     9901 aaaatcgaag gttggatagc cccggatact tacaactaca cgcccaattc caccgattta
     9961 gccttgctta aacgggctta tcaaaagcag aaaacggcgt tggaacaggc ttggaaaaat
    10021 agagcggaaa atctaccgct tgcaacacca tacgaaatgc tgattcttgc ctcgattgtg
    10081 gaaaaagaga ccggcattgc gaccgaacgc ccacaagtgg catcggtctt tattaaccgt
    10141 ttacgcaaca atatgcgact gcaaaccgat ccaaccgtca tttacggaat gggcgatcgt
    10201 tataacggca atatccgccg caaagattta gaagaggcaa cgccatacaa tacttaccag
    10261 attgacggct taccgccaac gccgattgcc atgccgagtg aagcttcgat taaagcggtt
    10321 gccaacccgg ataatacacc ctacctctat tttgtggcag acggcacggg cggtcataaa
    10381 ttcagcaaaa cactgaatga gcataataaa gcggtggcag aatggattca aattgaacgc
    10441 aaacgcaaaa atgaacaaaa atagtgagaa caatatgcgt ggaaaattta ttgtaattga
    10501 aggcttagag ggcgcaggca aaacgactgc tcaccaagtg attctcaaag agttggaaca
    10561 agccggcatt aatgacgtag taatgacccg agaacccggc ggcacccccc ttgccgaaaa
    10621 gttacgccat ttaattaaac acgaaaccga agaagccatt aacgataagg ctgagctgct
    10681 aatgctctac gctgctcgtg ttcaattagt cgaaaatgtg atcaaacctg cccttgccga
    10741 aggcaaatgg gttctgggcg accgccacga tatgtcttcc caagcctatc aaggcggtgg
    10801 acgtaagttg gatcgtcact tactcgaaac cttaaaagaa tcggtactcg gcacattcga
    10861 gccagattta acgatttatc tcgatctcga tccggtgatt ggtttagaaa gagccagagg
    10921 cagaggcgaa ttagaccgca tcgaacagca aagccttgac ttcttctacc gcacacgaga
    10981 gcgttattta gaattaaccc aacacaacga taaagccgtg atcatcaatg ccgaacaacc
    11041 catcgaacag gtgactgcgg atattcaaca agtaattaga aactggctga aataatgtac
    11101 ccttggctcg aaagcactta tcaacaactt accgattcat ttttacaggg tcgaggtcat
    11161 cacgccttac tgttcaaaac agatgttggt cttggtacag acaccttaat ctacaaggtg
    11221 gctgaatggt tgctttgcag ccaaaaactc cgccatcaac cttgtcttga atgcaaaagt
    11281 tgcctgctta tgcaaagcaa caaccacccc gatttccaca ttcttgagcc gattgaagac
    11341 aaagatattg gtatcgacca agtgcgtgag ttgatttata aactccagaa tttcgcccaa
    11401 caagggggaa atacggtcgt ttatattcga ggagttgatc gtttaaccga ggcaagcagt
    11461 aatgccctgc tcaaaacctt ggaagagcca cgtgaaaacg tctatttctt gctcgaagca
    11521 ccgcttcaag caacagtttt agctaccatt caaagccgca gccaaacttg ggtactttac
    11581 gccccacaag cctcagaagt aatggcttgg ctacaaacac aatttccggc aatctcaacc
    11641 gacgacttag agattgcact ccgcctttgc cactcacgcc cactaatttg caaaaatttt
    11701 atcgaaaatg accgcttgca acagcgaaaa acctttttgc aaaccttctg gcgtttctac
    11761 aaaagccacg atgtcttctt gttattccaa gccttcgccc aagaaaaaga gctgatttta
    11821 cagcaactcg aatggctgga aagtttcttt agcgatgccc taaaagctaa aatggcaatc
    11881 agccacggtt ggctaaaccc ggatctccaa aacggcattc tcccttttag ccaacaacta
    11941 acgacccacg gcttacttaa agggcatcaa attctccaac aaacccagcg ggatttaacc
    12001 gaaattaacg ccgtcaatcc ggaattgatg ttgctagatt gcctgacgaa gttggttttg
    12061 gtgtttgagt aaaagccctc tctcatagaa ggtagctttc aattagccgt aaaaagaggc
    12121 ttctagccct agaatatagt ttataacttg caaaattatc tatctttgtt attgtatgaa
    12181 taattcacac aaggagaata ttatggcaag aacaaccagc gtgactttag gcgaaccttt
    12241 aaatgatttt gtaaatgaaa tggtggcaag tgggcgttat ggctctacca gtgaagtagt
    12301 gagaaccgct ttacgaatgc ttgaggaaaa agagcaatac ttagctcagt tgcgacaagc
    12361 cattgatgat ggtgatgcta gtggttatgc aaccgaaacg attgatgaaa tgatgttgag
    12421 agtaaaggcg gaacttaatg tataaacttt ctgctcaagc actccgagat caagagaaac
    12481 tttttcgtta cagtatctct caatttggtg ttcaacaaac agaatcttat tttgcagatc
    12541 taaagcatat tttgaattta ttagctgatt ttccaacaat gggaacttct gcggaatata
    12601 ttcgtggtgg cttgcgaatg cacacacatc aatctcatac aatttattat cgaataaaag
    12661 cagatcatat atttattgtt cgcatcttac ataaccaaat gaatcataaa cgctatattt
    12721 agaaaaatga aagacttatt tatcatagac tcacattgtc atctagattc tctagactac
    12781 gaaactcgtc acaaaaacgt ggacgaagta attgaaaatg ccaaagcccg aggggtgcat
    12841 cattttatct cggtttgcac tacagttggg cgttttgaag caatgaaaaa cttaaccgcc
    12901 catcgtaatg acgtttcact ttcttgtggc gttcacccgt tgaatgtgga agatgaacct
    12961 tttgattacg ataaattatt tcagttcgct caagatccga aagtggttgc cattggggaa
    13021 actggtttgg attatcacta cacaccggaa accaaagcgt tgcaacaatc gcttttcgtt
    13081 caacaaattg aaattgcaaa caaactcaat aagccactca ttatccattc tcgttcggca
    13141 cgccaagata cgatggatat gttggaacaa aataatgccg aaaaatgcgg tggggtgttg
    13201 cattgcttta ccgaagattg ggcaatggca aaacgggctt tagacatcgg cttttatatc
    13261 tcaatttcgg gcattattac tttccgcaat gcagaagaac tccgagaagt cgtgcgaaaa
    13321 gtgccgttag atcgcttatt ggttgaaaca gattcccctt atcttgcccc gattccttat
    13381 cgtggtaagc cgaaccagcc ggcgtatgtg cgggaaactt gcgaatatgt ggcgacatta
    13441 aaaggcgttt caactgaaga attagctcgc attacaaccg aaaatgtgca acacttattc
    13501 aacattaaat tataaggaac taatatgaga gcaatactta agtattttct gattcttgtc
    13561 tcactatcat tttttattgt attaggcggt gcagttaatt atgcaatgcc aagttatgaa
    13621 gataccgtag taacaggtat ggaagtacgc cgaatggata aagatggtat tatcagcaaa
    13681 gcgaatcctg ctgatggcga ggtgcgcgat gtttatttct tattcacgga agatcctgaa
    13741 accaaaaagg taatggttta tcgtaatgaa gataccggct gggggttgcc tccttatttc
    13801 aaattcggat ctgccgacat tcaagccaaa gctcaagcct acgctaacga aaaacaacgt
    13861 gtgcaaatta aatattacgg ctggcgaatc aattggctaa atgaatttag aaatattgtt
    13921 tcaatcaagc cattagaaga agcagaaaca gtcagcaaac caattatgag ctatgtactt
    13981 tatgccgtat tggcgttctt gttcttcctc tcagtacaat ttattcgtgg catttttaaa
    14041 gattaatgcc gattaacctt tgacaaacgg ttcgattttg taaaaaattg aaccgttttc
    14101 ttttttatca acaatatcaa atgacgtact attttattgc cgatctccac ttaaatgaaa
    14161 atcagcctga aattacccac ctctttttgc aatttatgca agaaaaagca ctacttgcag
    14221 aagcggttta tatcttaggt gatctgtttg atttctggat tggcgatgat gagcagtctg
    14281 aactcatttc aaccgttaaa caggcaatca aaaccctcac tacaagcggt acaaaatgct
    14341 attttatttg cggaaatcgt gattttttaa ttggcaaacg attcagcgaa caaacgggta
    14401 tggttatttt gcctgattat cacgttatag atttattcgg cacatctacc ttgctttgcc
    14461 acggcgatac gctttgtact gatgatgtga aatatcaaca atttcgtaaa aaagtccacc
    14521 aaaaatggcg acaagctatc tttttgatgt ttccgctttc ttggcgaatt cgtattgcgg
    14581 agaaaattcg atccaaaagc aaacaagaaa agcgtgataa atccgctgaa attatggacg
    14641 taaacgctga agttaccgct caaattgtcg caaaatacaa tacaactcaa cttatacacg
    14701 ggcatacgca tcgacaagca atccatcagc ataatggatt tacccgcatt gtattaggcg
    14761 actggaaaga aaattacgcc tctattttaa gcgtaaccga gcaaggagct gaatttatat
    14821 gattaatgtg attattcctt gctataacgc cgaaaacacc cttgttcgtg cagtgcaaag
    14881 tgtattaaat cagtctggat taaatctatt gtggcttatt gatgatgctt caacggataa
    14941 tacgcttgcc ttagctaaac atttacaagc ccaagtgcct gataaaatta gagtggaaca
    15001 aatgcctcaa aatggcggtg ttgccaaagc acgcaactgg ggagcattac aaagtgaaac
    15061 agatttaatt gcctttttag atgctgatga tgcttatgaa aacggggcat tgcaagttgc
    15121 tgaaaagatt tttgagttta aaccggaaac cggcttggtt cggttagcat taaaaccggt
    15181 aacttagatc aacgttacag ctctcaccct aattttgagt tagcttggca atatatgcaa
    15241 atgactggtg caggcaacac tgtatttcgg cgtagtttct tcctcgcttg tggcggcttt
    15301 ccacaacatc agctcttcca agaattaggt ggagaagatg gtgctttagg catagccact
    15361 acacaaatta gctctgtagc tactgcattt aatgatgtcg gtgttttaca ttactgccga
    15421 gagggtatgc acgcagaaag attattaaat gcgattttat tcaacgaaaa agatcccaat
    15481 gttactgaag aaaaagttaa acaagccaac ctaattaccg aaaatattgt taataatatt
    15541 agaaatctac aagactgtct taatagtaaa gggattggta ttaagcctta tacgcttgaa
    15601 tggagctaaa aaagcatttg cagattttcc ctaaaaaaa
//
LOCUS       DANLXD010000062        15271 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.062, whole genome shotgun sequence.
ACCESSION   DANLXD010000062 DANLXD010000000
VERSION     DANLXD010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15271)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15271)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15271
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.062"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..482)
                     /locus_tag="PXD18_001595"
     CDS             complement(<1..482)
                     /locus_tag="PXD18_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302018.1"
                     /translation="MADPHIQSPMDFWDYLTVIIYRSGFVLATLMLLLLPYYPQTAQY
                     GLLVSGTMLASSLHLYAKSFRLIFQFSVWIGLLGAVFNFPLLAFGAMLLVIGGLSYKE
                     YFCFRVFGLNFQPLLVAVLWIAFALEWSLLVQILSLVCGLLLLVLSIQKWRMPLHFDI
                     G"
     gene            complement(505..1482)
                     /gene="dusA"
                     /locus_tag="PXD18_001596"
     CDS             complement(505..1482)
                     /gene="dusA"
                     /locus_tag="PXD18_001596"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HDL6302019.1"
                     /translation="MTNEIQPFYRGRFSVAPMLDWTTRHCRYFHRQFSRQALLYTEMI
                     TAPAIIHAKYDLLEYDPSENPVALQLGGSDPAQLAHCAKLVAERGYAEINLNVGCPSD
                     RVQNGMFGACLMAKADLVADCIKAMQDAVEIPVTVKHRIGIDDLDSYEFLCDFIEKVQ
                     PYSNDFIVHARKAWLTGLSPKENREIPPLDYDRVYQLKRDFPHLKISINGGIKTIEEI
                     KQHLQFVDGVMVGREAYQNPSMLGEIDSQIFNENRPLVTAKEAVEKMFPYIERELAKG
                     VYLNHIVRHMLGAFQHCKGARQWRRHLSENATKSGAGVEVVEQALAFIG"
     gene            1833..2810
                     /locus_tag="PXD18_001597"
     CDS             1833..2810
                     /locus_tag="PXD18_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDL6302020.1"
                     /translation="MSRNLFQKRLNIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQ
                     DYRTTINDHERHVLTRAMLAISQVEVNVKRFWGELYCYFPKPEMDDVGGTFAESEVRH
                     KDAYSFLLEKLGLNEMFSQIHEIEPLMNRIRYMESFMKDKDAGKGEFVLSLVLFSLFV
                     EHISLFGQFIIMMSFNKHKNLFKGISNAVEATSKEEEIHGKFGIALYEILRDEHSELF
                     TPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFITKATVENYIKNRYNNSLSILGLE
                     PPHDIDPELLKETEWFDIEILSTKETDFFNKRSTDYSKKMKQITADDLF"
     gene            2797..4464
                     /locus_tag="PXD18_001598"
     CDS             2797..4464
                     /locus_tag="PXD18_001598"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDL6302021.1"
                     /translation="MTYFNTDRPDFHWLNEDSRLFLQRGYLLEGTTALDRIRFIAEHA
                     ERKLGIEGYADKFYHYMARGYFSLSSPIWSNFGLDRGLPISCFGSYIGDSIHEIMVTT
                     AEVGMMSKIGGGTSAYFGDIRPRGSLIKNNGKSDGSFNFSKLFDTVIDVISQGTSRKG
                     QFAGYIDIEHGDIDEWLDIHTEGNPIQLMYYGVCVGHDWLESMKAGDPYKRQLWAKLL
                     QRKTETGIPYLFFKDNANAGRPDVYKDKNMTIHASNLCTEIMLPSSNEESFVCCLSSM
                     NLLYFDEWKDTDAPETLTYFLDVVMSEFIEKSQSIPFLDRANRFARRHRALGLGVLGW
                     HSYLQANNIAFDSFQAMQKNNEIFKTLQAKTLKASQELAQRFGEPEILEGYGRRNTTL
                     MSIAPTKSSSFILGSVSPSVEPFKSNYYVKDLAKIKTVYKNPFLEKLLQEKGLDTEEI
                     WTSILQNDGSVQHLEQLSEHEKEVFKTFAEISQLSVIQQAAQRQKYIDQGQSINVMIH
                     PATPARDLNQLYLTAEELGLKSIYYQNSMSAAQVFNRNLLSCSSCEG"
     gene            4468..4887
                     /locus_tag="PXD18_001599"
     CDS             4468..4887
                     /locus_tag="PXD18_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302022.1"
                     /translation="MGNLSHTSPNTIVEVVGEFPEITSSGYTFDKGPIQLRIGKHTAP
                     NKGFGVKHIEAEHMQEILNLGFTSVNEFVKAIIVENAKIFCEFSDLKGNHRPIILKAS
                     IGIVVLERKFLESGTIYSVVTAYRRTNPHGIQIGTMK"
     gene            complement(5122..5883)
                     /gene="nudC"
                     /locus_tag="PXD18_001600"
     CDS             complement(5122..5883)
                     /gene="nudC"
                     /locus_tag="PXD18_001600"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HDL6302023.1"
                     /translation="MNKGYWIIVSDFDIALEAGEIPFGSAEELGLSGREKLTIGQYQG
                     SPAYLVKALESDNQREFAYLRSQINRPPELSHLLHRAVSLNHFFQTHQFCGKCGEKTI
                     LASDEIAIYCNACGNRAYPTISPSIIVAVRKGRQILLANHLRHKGTIYTTLAGFVEAG
                     EAVETAVHREVFEETGIKVKNVRYFGSQPWAFPNSLMLGFLADYESGEIQLQEEEICD
                     AKWFDCEESLPEIPQQGTIAFELIQATLKLCRESK"
     gene            complement(5876..6559)
                     /locus_tag="PXD18_001601"
     CDS             complement(5876..6559)
                     /locus_tag="PXD18_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HDL6302024.1"
                     /translation="MKQPTFKRMTNKRSNFAKNLQKNPQKRPLTFAETTLVLLNKPYD
                     VLTQFTDEQGRKTLKDFITMPNIYPVGRLDRDSEGLLLLTNNGEIQHRLAHPKFDKQK
                     TYWVQVEGVPQPEDLAKLAKGVELKDGLTKPAKVRAIATPDFAWNIAPQIRERKTIPT
                     SWIELIISEGKNRQVRRMTAHIGFPTLRLIRVGIGQFRLGNLGCGEFQVLSENEKRKL
                     FTQLGLKDE"
     gene            complement(6556..7404)
                     /locus_tag="PXD18_001602"
     CDS             complement(6556..7404)
                     /locus_tag="PXD18_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6302025.1"
                     /translation="MEKRTLALLKVHGTAVLFGASGIFGALIQSSAETIVLGRVMIAF
                     AIISLYFLWKKQPLVKLNLQQMAQLAFSAALLAAHWVTFFVAVKVGGVAVATLGFASF
                     PAFVALFESLFFREKLRFREVVLLIAITVGLILVTPEFTFGNQATQGLLWGVLSALVY
                     GILAVANRRTMSKISGVQASWWQYIFATLFLLPLSITEFPSVSTQDWFWIFCIGFLCT
                     TLAYTLFISSLDTINARTASMIISLEPVYAIVIAWLCFNEVPTLKMIIGGLIILLSVA
                     WANLKK"
     gene            complement(7404..7889)
                     /locus_tag="PXD18_001603"
     CDS             complement(7404..7889)
                     /locus_tag="PXD18_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HDL6302026.1"
                     /translation="MPILAILFGIFFYIYCEISLLVNIGSIIGVLPTILLLVVISFLG
                     LWIVKLRGVYTLFSIKQDLSQGKIPTEAVGNSVMFIVAGILLIIPGFLSDILAILCVL
                     PFSRKWIQAFVINSVKNKVFMHFTAQTSSFSVTSAQDSNTFDAEFERKPDEQDQHNRI
                     K"
     gene            complement(7891..9213)
                     /gene="pepQ"
                     /locus_tag="PXD18_001604"
     CDS             complement(7891..9213)
                     /gene="pepQ"
                     /locus_tag="PXD18_001604"
                     /EC_number="3.4.13.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidase"
                     /protein_id="HDL6302027.1"
                     /translation="MKNLFSTHLARLQQTVQSLLENAFLDGLWIYAGKAKTLFLDDQT
                     APFKINPYFNYFFPYPQAENCWLFLDGKNKPKIYFYAPEDYWVSTLKVPTEAFFAAEF
                     EWVLLRAENEIATFIQNPTACAFIGEDVELAKKLGFSHINPQKVLNSLNFARSIKTEF
                     EIESIYQAQFSALKGHQVAKEAFFAGKSEFEINLEYLKATQQSDLNVPYGNIVAINQN
                     GAVLHYTALDFDTHAKRHSFLIDAGTTVNGYASDLTRTYAFDSGSEFAELVAKMEQLK
                     LQIIAELSIGVNYLHYHTRMQQMISQLLAEHQFIHLSAEQIFEQGISRTFFPHGLGHL
                     LGIQVHDVGGFQQNARGSHKAPPEVYPSLRCTRELQENMVLTIEPGFYFIEMLLKPWK
                     NSALSSAFNWQKIEAFKAFGGIRTEDNIVMRANGAENLTANAAATLGG"
     gene            9224..9466
                     /gene="tusA"
                     /locus_tag="PXD18_001605"
     CDS             9224..9466
                     /gene="tusA"
                     /locus_tag="PXD18_001605"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA"
                     /protein_id="HDL6302028.1"
                     /translation="MTQLTVNKELDTLGLRCPEPVMLTRKTIRNMEEGEILHIIADDP
                     ATTRDIPSFCEFMDHQLIQKEVDSTPYHYWIKKGLE"
     gene            complement(9533..9964)
                     /gene="rraB"
                     /locus_tag="PXD18_001606"
     CDS             complement(9533..9964)
                     /gene="rraB"
                     /locus_tag="PXD18_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HDL6302029.1"
                     /translation="MYNLDELRTETDETISSLLADGSDPEALYIIEHHVAHHDFDKLE
                     KLVVDAYKLGYEISEAEEVEDENGKVIFVCDIVSEIHLNADLITAQQKELLPLIEKAG
                     AEYEGWGTYFEDPNADEDEYGDDGEFFDDENDDFEDEPRRH"
     gene            complement(9979..10590)
                     /locus_tag="PXD18_001607"
     CDS             complement(9979..10590)
                     /locus_tag="PXD18_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HDL6302030.1"
                     /translation="MKLNYHKTHFLTSAPDIRHLPEDTGVEIAFAGRSNAGKSTALNA
                     LTNQKSLARTSKTPGRTQLINLFKVETNCKLVDLPGYGYAAVPEQMKIQWQKALGEYL
                     QKRECLGGVVILMDIRHPLKDLDQQMIEWAVSANLPVLLLLTKADKLSQSARSKQVKM
                     VREAILPFQGDIQVEAYSALNKIGIDKLSNKLDSWFAPKLITE"
     gene            complement(10592..11008)
                     /locus_tag="PXD18_001608"
     CDS             complement(10592..11008)
                     /locus_tag="PXD18_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HDL6302031.1"
                     /translation="MSWYKALFSFNGRLNRRGFWIGFGIHFLFLFMVAMWINLAELSL
                     LSVLPLIITGFSLSAIIIKRLHDRNRSAKALLMALVPIICYLAAPYSQGIMQILLGQV
                     MPAFIGMLLFLEWGVFAGNPEPNQYGEQGLSFKFRE"
     gene            complement(11012..11842)
                     /locus_tag="PXD18_001609"
     CDS             complement(11012..11842)
                     /locus_tag="PXD18_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HDL6302032.1"
                     /translation="MFEYFLSLSPIWQAFLAGLFTWGCTIFGSSFVYFFKSVNRKLLD
                     SMMGFAAGVMIAASFWSLLAPSLEYAEADYGSLAWLPAAIGFLAGGAFIRLIDYVVPH
                     LHLSKPIEQAEGNDQLKQGLSKSTLLFLAITIHNIPEGLAIGVAFGALATQVSGVDAS
                     IMGAIGLAIGIGLQNIPEGSSLVLPIRGEGHSRKKAFWYGSMSAVVEPIAAVIGAVFV
                     LSMTAILPYALAFAAGAMIFVVVEELIPESQSSGNTDIATLSLMLGFVVMMVLDVALG
                     "
     gene            complement(12179..12294)
                     /gene="rrf"
                     /locus_tag="PXD18_001610"
     rRNA            complement(12179..12294)
                     /gene="rrf"
                     /locus_tag="PXD18_001610"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(12456..>15271)
                     /locus_tag="PXD18_001611"
     rRNA            complement(12456..>15271)
                     /locus_tag="PXD18_001611"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT         4508 a         3583 c         2900 g         4280 t
ORIGIN      
        1 ccaatatcaa aatgcagcgg cattcgccat ttttgaatac tcagcacaag aagcaacaag
       61 ccacagacaa ggcttaaaat ttgcaccaat aaagaccatt ctagtgcaaa agcaatccac
      121 aataccgcca ctaaaagcgg ttggaaattt aagccgaata ctctaaaaca gaaatattct
      181 ttatagctta atccgccgat caccagtagc attgccccga acgcaagcaa agggaaatta
      241 aacacagcac caagtaagcc aatccaaaca gaaaattgga aaatcaggcg aaacgatttg
      301 gcataaagat gcaaagaaga tgccaacatt gtgccagata ctaataaacc atattgtgcc
      361 gtttgcggat aataaggcaa taaaagcaac atcaatgtag ctaacacaaa accgctgcgg
      421 taaatgatga cggttaaata atcccaaaaa tccattggcg attgaatatg tggatctgcc
      481 ataactgcct ccttaaacaa taaattagcc aataaacgca agggcttgtt ccactacttc
      541 tacaccggct cccgacttag tggcattttc acttaaatga cgacgccact gcctcgctcc
      601 tttgcaatgt tgaaacgcac caagcatatg gcgaacgata tgatttaaat agacaccttt
      661 ggcaagctca cgttcaatat aagggaacat cttttccacc gcttcttttg ccgttacaag
      721 cggtcgattt tcattaaaaa tttgcgaatc gatctcgcct agcattgacg ggttttgata
      781 ggcctcacgc cctaccatta ccccatcaac aaactgcaaa tgctgtttaa tttcctcaat
      841 ggttttaatg ccgccattga tgctaatctt taaatgcgga aaatctcgct tgagctgata
      901 aacccgatca taatctaaag gcggaatttc acggttttcc ttcgggctta accctgtcag
      961 ccacgccttg cgggcgtgta cgataaaatc attgctataa ggttgcactt tttcgataaa
     1021 atcacacaaa aattcatagc tgtctaaatc atcaatccca atacgatgtt taaccgtgac
     1081 cggaatttcc accgcatctt gcattgcttt aatacaatcc gccactaaat ctgcttttgc
     1141 catcaaacaa gccccaaaca taccgttttg cactcggtct gacgggcaac cgacatttag
     1201 attaatctcg gcatagcctc gctctgccac caatttggca caatgagcca actgtgccgg
     1261 gtcgcttcca cccagttgca aagccaccgg attctcgctc ggatcatatt ccaacaaatc
     1321 atatttggcg tgaataatcg ccggggcggt gatcatttcg gtataaagca aggcttgacg
     1381 actaaattgg cgatgaaaat agcggcagtg acgggttgtc caatctaaca ttggagcaac
     1441 cgaaaaacgt ccacggtaaa aaggttgaat ttcgttagtc ataaaaatat caaaataaag
     1501 cggtaaaaaa tcagtaaaaa ataaccgctt gtaagcgatt caaaacaagc agccatcata
     1561 ctcgaaaaag ccagataaac atagtttcct caaggcttcc ccatctatct gcgcactttt
     1621 aaaacaacct taaaacacaa tatatagtgt ttcaacatca aatcacacac aacatattga
     1681 agcaaaaatt tacaaaatta tttttcttta taaatcaata agctaccaaa gaccaataaa
     1741 aaagagtgtt tgtcaagact tgtcttgaaa ctttttttgc atacaatcat ctaccagttc
     1801 caaacataaa ctttaagata gagcctacga atatgtctag aaacctcttc caaaaacgct
     1861 taaatattaa gccgtatgag tatcctgagc ttcttgaatt taaagatgca attcgccatt
     1921 cttactggtt acacaccgaa tttaacttca ccggcgatat tcaagactat cgcaccacca
     1981 ttaacgatca cgaacgtcac gtgttaaccc gagcaatgct tgcgatttca caagtagaag
     2041 tgaatgtaaa acgtttctgg ggcgagctat actgctattt cccaaaaccg gagatggacg
     2101 atgtaggcgg tacttttgct gaaagtgaag ttcgccataa agatgcttac tcgttcctat
     2161 tggaaaaatt aggcctaaat gaaatgttca gtcaaattca tgaaattgaa ccattaatga
     2221 accgcattcg ttatatggaa agttttatga aagataaaga tgctggcaaa ggcgaatttg
     2281 ttttatcgtt agtgctgttc tctttatttg ttgagcatat ttcattgttt ggacagttta
     2341 ttatcatgat gtcgttcaac aagcataaaa acctgtttaa agggatttcc aatgcggttg
     2401 aagccacctc aaaagaggaa gaaattcacg gtaaattcgg aattgcgtta tacgaaattt
     2461 tacgtgacga acacagtgaa ctattcacac cagaattttt tgaagatttg caaaccttgg
     2521 caaatcaagc gtttgaagca gaacgtggca tcttagactg gattttcgaa gaaggtgatt
     2581 taagctttat caccaaagcg acggtagaaa attacattaa aaaccgttac aacaattctt
     2641 taagcatttt agggttagag ccgccacacg acatcgaccc tgaattatta aaagagactg
     2701 agtggtttga tattgaaatt ctttcaacca aagaaaccga tttctttaac aaacgtagca
     2761 ccgattattc taaaaaaatg aaacagatta ccgcagatga cttattttaa tacagaccgc
     2821 ccggacttcc actggcttaa tgaagacagc cgtttattct tacaacgtgg ctatttattg
     2881 gaaggaacaa ccgcattaga ccgcattcgt tttattgccg aacacgcaga gcgaaaactc
     2941 ggcattgaag gctatgccga taaattctat cactatatgg caagaggcta cttctcgctt
     3001 tcttcgccaa tttggtcaaa ctttggctta gatcgtggct taccgatttc ttgtttcggt
     3061 agctacatcg gcgactctat ccatgaaatt atggtgacta ccgctgaagt gggcatgatg
     3121 agtaaaattg gcggtggtac ttcggcctac tttggcgata ttcgtccgcg tggctcgtta
     3181 attaaaaaca acggtaaatc agacggctca tttaacttca gtaaattatt tgacactgtg
     3241 attgacgtga tttcacaagg aacatcacgc aaaggtcagt ttgccggtta tattgatatt
     3301 gagcacggcg atattgacga atggctggat attcacaccg aaggcaaccc aattcaatta
     3361 atgtattacg gtgtgtgtgt cggtcacgat tggttagagt caatgaaagc cggcgatcca
     3421 tacaaacgtc agctttgggc aaaattgtta caacgtaaaa ccgaaaccgg tatcccttat
     3481 ttattcttta aagacaatgc caacgcaggt cgtcctgatg tatataaaga taaaaatatg
     3541 acgattcacg cctctaactt atgtactgaa attatgttgc cttccagcaa cgaagaaagt
     3601 ttcgtatgct gtttatcgtc tatgaaccta ctctactttg atgagtggaa agataccgat
     3661 gcaccagaaa cattaaccta tttcctcgat gttgtaatga gtgaatttat tgagaaaagt
     3721 caatcaattc cattcttaga ccgtgcaaac cgctttgccc gtcgccatcg tgcattaggt
     3781 ttaggcgtgt tgggctggca cagctatcta caggcaaata atattgcctt tgacagcttc
     3841 caagcgatgc aaaaaaacaa cgagattttc aaaacgcttc aagcaaaaac cttgaaagcc
     3901 tcgcaagaat tggctcaacg cttcggcgag ccggaaattt tagagggcta tggtcgccgt
     3961 aatactacat taatgagtat tgctccgact aaatccagta gctttatttt aggcagtgtg
     4021 tcgccatcgg tagagccgtt taaatccaac tactatgtaa aagatttagc gaagatcaaa
     4081 accgtgtata aaaacccgtt cttagagaaa ttactccaag aaaaagggct agacaccgaa
     4141 gaaatttgga cgtctatttt acaaaatgat ggctcggttc agcatttgga acagctttcc
     4201 gagcacgaaa aagaagtatt taaaaccttt gccgaaatca gccaattaag cgtgattcag
     4261 caagctgctc aacgtcaaaa atatattgac caagggcaaa gtattaatgt gatgatccac
     4321 ccagccacac cggctcgtga tcttaaccaa ttatacttaa cagcagaaga gctgggctta
     4381 aaatccatct actaccaaaa ctcaatgagt gcagcacagg tatttaaccg taacctatta
     4441 agctgctcaa gttgcgaagg gtaaataatg ggaaatttat cgcatacttc acctaatact
     4501 attgttgaag ttgttggtga atttcctgaa ataacatcta gtgggtatac ctttgataaa
     4561 ggtcctattc aattaagaat cggcaaacat actgctccaa ataaaggctt tggtgtaaag
     4621 catattgaag ccgagcatat gcaagaaatt cttaatctag gatttacatc agttaatgaa
     4681 tttgtcaaag ctatcatagt agaaaacgct aaaatttttt gcgaattctc agatttaaaa
     4741 ggcaatcatc gccctattat tctgaaagca agtattggca ttgtggttct agagcgtaag
     4801 tttttggaaa gcggtacgat atattcagtt gtaaccgctt atagaagaac aaatcctcac
     4861 ggaatacaaa taggcactat gaaataaagt acgttagtgt tataatcagt tccacgcaag
     4921 agcatttgta gaaaataaca ggcggatttg gttttctact gtgggcggca ggtttccgct
     4981 aacctgtaat agctatttaa tttttatatt aaatcctgaa cttgaaacag actaagggat
     5041 tgctgcggta gctaagaata caaacctctc tataatcata tagagaggtt ttttcttatt
     5101 gatgagcaca agttaagata attatttact ctcccgacat aacttcaagg tagcttgaat
     5161 cagctcaaaa gctattgtgc cttgttgtgg gatttcaggt aagctttcct cacagtcgaa
     5221 ccattttgca tcgcagattt cttcttcctg tagctgaatt tcaccgcttt cataatccgc
     5281 taaaaaacct agcattaatg aattgggaaa cgcccaaggt tggcttccaa aataacgcac
     5341 atttttcact ttaatgcccg tttcttcaaa cacttcacga tgcaccgcag tttctaccgc
     5401 ctcaccggct tcgacaaaac cggctaaagt ggtataaatt gtgcctttat ggcgtagatg
     5461 attggctagt aggatttgtc tgccttttcg caccgccaca ataattgacg ggctaatcgt
     5521 tgggtaagct cgattgccac acgcattgca gtaaattgca atttcatcgc ttgccagtat
     5581 ggttttctcg ccacattttc cgcaaaattg gtgagtctga aagaaatggt taagcgaaac
     5641 agctcgatgc aacaaatgag acagttcggg tggtcggtta atttggcttc ttaaataagc
     5701 aaactctcgc tgattatccg attctaacgc cttcaccaaa taagccggcg agccttgata
     5761 ttgcccgatg gttaatttct cacgtccact taagcccagc tcttccgcac ttccgaatgg
     5821 aatttcccca gcctccaagg caatatcaaa atcgctgacg ataatccaat atcctttatt
     5881 catctttcaa tcctaattgt gtaaacaact tacgtttttc attttcagat agcacttgaa
     5941 actcaccaca gcctaaattg cctaatctaa actggcctat cccaacacga attaaccgta
     6001 aagtcgggaa accgatatgt gcagtcattc ttctgacttg gcgatttttc ccttcagaaa
     6061 taatcaattc tatccagctg gtcggaatgg ttttccgctc acgaatttgc ggggcgatat
     6121 tccaagcaaa atcgggcgtt gctattgctc tgactttcgc gggcttggtc aaaccatctt
     6181 ttaactccac cccttttgct aatttggcaa gatcttccgg ttgtggaaca ccctccactt
     6241 gtacccaata ggttttctgc ttgtcaaatt tcgggtgagc taaacggtgc tggatttcgc
     6301 cattattagt caaaagcaac aatccttcac tgtctctatc tagccgcccg accgggtaaa
     6361 tattgggcat cgtaataaaa tcttttagcg tttttcgccc ctgttcatcg gtaaattggg
     6421 ttagtacatc ataaggctta ttgagtaaca caagggtggt ttccgcaaag gtaagcggtc
     6481 gtttttgcgg atttttttgc aaatttttag cgaaatttga ccgcttgttt gtcattcttt
     6541 taaaggttgg ttgtttcatt ttttcaggtt cgcccacgca acagaaagta aaataattaa
     6601 gccaccgata atcattttaa gggttggcac ttcattaaag caaagccacg cgatcacaat
     6661 cgcatacacc ggctcgaggg aaataatcat tgaggcagta cgggcgttga tggtatcaag
     6721 gcttgaaata aacagcgtat aggcaagggt tgtacataaa aaaccgatac agaaaatcca
     6781 aaaccaatct tgggtggaaa cgcttggaaa ttcagtgatg gagagaggca acagaaaaag
     6841 tgtagcaaaa atatactgcc accagcttgc ttgcacaccg gaaattttgc tcatggtacg
     6901 gcgattcgct accgccaaaa taccatacac caaagcagat aacacgcccc acaataaacc
     6961 ttgagtggct tgattaccaa aagtaaattc aggggtaact aaaattaaac caaccgtgat
     7021 ggcaattaat agcaccactt cacgaaagcg taatttttca cggaagaaca ggctttcaaa
     7081 taacgccaca aatgccggaa agctggcaaa gcctaaggtt gctaccgcca caccacctac
     7141 tttaaccgcc acaaaaaaag taacccagtg ggcagctaat aaagctgcag aaaatgcaag
     7201 ttgagccatt tgctgtaagt tgagctttac aagcggttgt tttttccata aaaaatacaa
     7261 agagatgata gcaaaagcaa tcatcactcg cccaagcaca atggtttcag ccgagctttg
     7321 aattaatgct ccgaagatcc ccgaggcacc aaataaaacc gctgtgccgt gtactttaag
     7381 tagtgcaagt gttcttttct ccactatttg atcctattat gttgatcttg ctcgtccggc
     7441 ttgcgttcaa attctgcatc aaacgtgttg ctatcttgcg cagatgtaac agaaaaagac
     7501 gaagtttggg cggtaaaatg cataaacacc ttattcttta cgctattaat tacgaaggct
     7561 tgaatccatt ttcggctaaa gggtaacacg cataaaatcg ctaaaatatc acttaaaaag
     7621 ccgggaataa tcagcaaaat gccggctaca ataaacatca ccgagttgcc gactgcttca
     7681 gtcggtatct tgccttggct taaatcttgc ttgatggaaa agagggtata aacgcccctt
     7741 aacttcacaa tccataaccc taaaaatgaa atcacgacca gtaacaaaat cgtgggtaac
     7801 acgccaatga tcgagccaat attcaccagc agcgaaattt cgcaatagat ataaaagaaa
     7861 ataccaaaca gaatcgctaa aataggcata ttatcctccc aacgttgcgg cagcgtttgc
     7921 cgtcagattt tctgccccat tggctcgcat gacaatattg tcttcggtac gaatcccgcc
     7981 aaaggctttg aaagcctcaa ttttctgcca gttaaaggca gaagataagg cactgttttt
     8041 ccaaggctta agtagcatct caataaaata aaaacccggc tcaatggtaa gcaccatatt
     8101 ttcctgtagc tcacgggtac aacgcaaact tgggtaaacc tctggaggag ctttatggct
     8161 gcctcgggca ttttgctgaa aaccgcccac atcgtgcact tgaataccca ataaatgccc
     8221 tagtccgtgt gggaagaacg tacggctaat cccttgttca aaaatttgct cggctgaaag
     8281 atgaataaat tgatgttccg ctaataattg cgaaatcatc tgctgcattc gggtgtgata
     8341 atgcaggtag ttcaccccaa tactcagctc agcaataatc tgcaacttca actgttccat
     8401 tttcgccacc agctcggcaa attcagaacc gctgtcaaag gcataggtgc gggtgagatc
     8461 ggaggcataa ccatttaccg ttgtgccggc atcaattaaa aaactgtggc gttttgcgtg
     8521 ggtgtcaaaa tctaacgccg tataatgtag caccgcacca ttttgattaa tcgccacaat
     8581 attgccataa ggaacattga gatcagattg ctgcgtcgct ttcaaatatt caaggttgat
     8641 ttcaaattcg cttttgccgg caaaaaatgc ctcttttgct acttgatgcc cttttaaggc
     8701 tgaaaattgg gcttggtaaa tactttcaat ttcaaactcc gttttgatgg agcgggcaaa
     8761 attcaggcta ttcagcactt tctgcggatt aatatggcta aagcctaact ttttggctag
     8821 ctcaacatct tcaccgataa aggcacaagc ggtcggattt tggataaagg ttgcaatttc
     8881 attctctgct ctcaacaaaa cccactcaaa ttccgcagcg aaaaaggcct ccgttggcac
     8941 ttttagagtg gaaacccaat aatcttcagg ggcataaaaa tagattttcg gcttattttt
     9001 gccatctaaa aataaccagc aattttcagc ttggggatat gggaaaaagt aattaaaata
     9061 agggttaatt ttaaacgggg cggtttgatc gtctaaaaat aaggtttttg ccttgccggc
     9121 ataaatccat aaaccgtcta aaaaggcatt ttccagcaag ctttgcactg tctgttgcaa
     9181 acgtgcgaga tgcgtagaga atagattttt cataaggaat aaaatgactc aattaactgt
     9241 aaataaagaa ttagatacct tggggctacg ttgcccagag ccggtgatgc tcacccgtaa
     9301 aacaatccgt aatatggaag agggagaaat tttgcatatc atcgccgatg acccggccac
     9361 tacccgtgat attccgagtt tctgcgaatt tatggatcac caattaattc aaaaagaggt
     9421 ggactccacc ccataccatt actggattaa aaaaggcttg gaataaacca caagcggtcg
     9481 attttagcca taaaattgca aatttatgca caaaatcgac cgcttgtttt aattaatgac
     9541 ggcgaggttc gtcctcaaaa tcgtcatttt catcatcgaa aaattcaccg tcatcgccgt
     9601 actcatcttc atcagcattc ggatcttcaa agtaggttcc ccagccctca tactccgcac
     9661 cggctttttc aattaatggc agtaactctt tttgttgtgc ggtaatgaga tccgcattca
     9721 agtgaatttc gctcacaatg tcgcatacaa aaatcacttt accattttcg tcttccactt
     9781 cttccgcttc ggaaatttca tagcccagct tataggcatc aactactaat ttttccaatt
     9841 tatcaaaatc gtggtgggca acgtggtgtt caataatata aagggcttca gggtctgaac
     9901 catcggctaa taatgatgaa atggtttcat cggtttctgt gcgtaattca tcgagattgt
     9961 acatattgaa ttccttactt attctgtgat taattttggt gcaaaccagc tatctaattt
    10021 gttcgacagc ttatcaatac cgattttatt cagtgcggaa taagcctcta cttggatatc
    10081 accttggaat ggtaaaatcg cttctcttac catttttacc tgcttagagc gtgccgattg
    10141 gcttaactta tccgctttgg tcaacagcag taacaccggc aagttggctg acactgccca
    10201 ttcaatcatc tgttgatcta aatctttcaa cgggtggcga atatccatta aaatcaccac
    10261 accgcctaaa cattcacgct tttgtaaata ctcgcctaat gctttttgcc actggatttt
    10321 catctgttca ggtactgctg catagccata gccaggtaaa tccactaatt tacaattcgt
    10381 ttcaacctta aacaagttaa tcaactgcgt tcgccccggt gttttggaag ttcgggctaa
    10441 acttttttgg ttagttaaag cgttcaaagc agtcgattta ccggcatttg aacgcccggc
    10501 aaaagcaatc tccacacctg tatcttcagg taaatgacga atatccggtg ctgaagttaa
    10561 aaaatgggtt ttatgatagt ttaatttcat tttattctct aaatttaaaa gataagcctt
    10621 gctcgccata ttgattcggt tcaggattac cggcaaatac accccattct aaaaagagca
    10681 acattccaat aaatgccggc atcacctgtc caagcaatat ctgcataatt ccttgtgaat
    10741 aaggagctgc aagataacaa ataatcggca ctaatgccat taacagggct tttgccgaac
    10801 gatttcggtc gtgtaatcgt ttaataataa tagcagacag gctaaatcct gtaattataa
    10861 gcggtagcac actcaataaa gacaattcag ccaaatttat ccacatagca accataaaca
    10921 ggaaaagaaa gtggattcca aatccaatcc aaaaacctcg tctatttagc ctaccgttaa
    10981 aactaaaaag tgctttatac caactcattt tctaccctaa agctacatca agtaccatca
    11041 ttactacaaa gcctaacatc aggcttaaag tcgcaatatc agtatttccc gaactttgcg
    11101 attccggaat cagttcttct acgaccacaa aaatcatcgc tccggcagca aaggcaagag
    11161 cataaggtaa aatagccgtc atcgacagca caaaaaccgc cccaatcacc gccgcaatag
    11221 gctcaaccac tgctgacata gagccatacc aaaatgcttt cttccgacta tgcccttcgc
    11281 ctcgaattgg caatacaagt gacgagcctt cgggaatgtt ttgtaaccct attccgattg
    11341 ccaaaccgat agctcccata atggaagcat ctacgcctga aacttgggtt gccaaagcac
    11401 cgaaagccac ccctatggct aatccttctg gaatattatg aatggtaatc gcaagaaaaa
    11461 gcaaagtaga ttttgataag ccttgtttaa gttgatcatt tccttcagct tgctcaatcg
    11521 gcttactcaa gtgcaaatgc ggcacaacat agtcaattaa tcgaataaaa gctccaccgg
    11581 caagaaagcc aatcgctgca ggcagccaag ctaaagagcc ataatccgcc tcggcatatt
    11641 ctaaagaagg tgcaagcaaa gaccaaaacg aggctgcaat cattacacct gcggcaaagc
    11701 ccatcatact gtctaataat tttcgattaa ccgatttaaa aaaatagaca aatgacgaac
    11761 cgaaaatcgt acaaccccaa gtaaataaac ccgctaaaaa agcttgccat attggagaaa
    11821 gtgaaaggaa atattcaaac aagaaatagt accagctaaa ataaatattg gctcattcta
    11881 tcaaagattc agggttatta atatagtgta gccaaaggct caacgaagat ttcacttgta
    11941 aaacttagca agaaaataac cgcttgcatt tccctttcat aaatacaatg aaaatcctaa
    12001 caagcggtca ttttccgtga gttttttacc tttaccacaa caacaaaaaa ccgcctgtat
    12061 ctctacaggc ggctctttct tggattactt gtactttgtt tatttgtact tattttgctt
    12121 ttgcttaagt tttcgctttt gtaactttta gctttcgctt aagctcgctt aaattaaaac
    12181 ccgacgatgc tctactctca catggcgaat caccacacta ccatcgacgt tactgcgttt
    12241 tacttctgag ttcggtatgg ggtcaggtag gaccacagca ctcttgtcgt cgggaaaatt
    12301 cttttctatt tttgaatttc tttaagttaa cttcctaatc taactcttag ttcactttaa
    12361 tagttagatt aacttcctta acttcgattg atttcttctc tagtttcgtt cttcttctca
    12421 atacaaaaac aagcctaaaa acatttgagc gttgtatagt taagcctctc gggcaattag
    12481 tactggttag ctcaatgtct cacaacactt acacacccag cctatctacg tcgtagtctc
    12541 caacaaccct tacacactta tagtgtggga gaactcatct cgaggcaagt ttcgtgctta
    12601 gatgctttca gcacttatct cttccgcatg tagctaccca gcaatgcctc tggcgagaca
    12661 actggaacac cagtgatgcg tccactccgg tcctctcgta ctaggagcag cccctctcaa
    12721 ttctccaacg cccacggcag atagggaccg aactgtctca cgacgttcta aacccagctc
    12781 gcgtaccact ttaaatggcg aacagccata cccttgggac ctacttcagc cccaggatgt
    12841 gatgagccga catcgaggtg ccaaacaccg ccgtcgatat gaactcttgg gcggtatcag
    12901 cctgttatcc ccggagtacc ttttatccgt tgagcgatgg cccttccatt cagaaccacc
    12961 ggatcactat gacctgcttt cgcacctgct cgacttgtct gtctcgcagt taagcttgct
    13021 tataccattg cactaacctc acgatgtccg accgtgatta gcaaaccttc gtgctcctcc
    13081 gttactcttt gggaggagac cgccccagtc aaactaccca ccagacactg tccgagaccg
    13141 cgttccgcaa tcttcgttag aacatcaaac gttaaagggt ggtatttcaa ggacgcctcc
    13201 acaatcactg gcgtgactgc ttcaaaggct cccacctatc ctacacatca aaattcaatg
    13261 ttcagtgtca agctatagta aaggttcacg gggtctttcc gtctagccgc gggtacaccg
    13321 catcttcacg gcgatttcaa tttcactgag tctcgggtgg agacagcctg gccatcatta
    13381 tgccattcgt gcaggtcgga acttacccga caaggaattt cgctacctta ggaccgttat
    13441 agttacggcc gccgtttact ggggcttcga tcaggagctt ctcttgcgat aacaccatca
    13501 attaaccttc cagcaccggg caggcatcac accctatacg tccactttcg tgtttgcaga
    13561 gtgctgtgtt tttaataaac agttgcagcc agctggtatc ttcgaccggt tcaaccttca
    13621 tccgcaaggg actacaatct acgccggcgc accttctccc gaagttacgg tgctattttg
    13681 cctagttcct tcacccgagt tctctcaagc gcctgagtat tctctacctg accacctgtg
    13741 tcggtttata gtacggttta taataacctg aagcttagtg gcttttcctg gaagcgtggt
    13801 atcgattact tcatctccgt agagactcgt catcacttct cggtgttaag gaagaccgga
    13861 tttgcctaat cttcccacct accggcttaa acagacatcc aacagtctgc taacctaacc
    13921 ttctccgtcc ccacatcgca gttattacaa gtacgggaat attaacccgt ttcccatcga
    13981 ctacgctttt cagcctcgcc ttaggggccg actcaccctg ccccgattaa cgttggacag
    14041 gaacccttgg tcttccggcg aacgagtttt tcactcgttt tatcgttact tatgtcagca
    14101 ttcgcacttg tgatatctcc agcagacttc tcaatccacc ttcatcgact tacacaacgc
    14161 tcccctaccc aacagacttt cgtctgatgc cgcagcttcg gtgctatatt tgagccccgt
    14221 tacatcttcc gcgcaggccg actcgactag tgagctatta cgctttcttt aaatggtggc
    14281 tgcttctaag ccaacatcct agctgtctaa gccttcccac ttcgtttccc acttaatata
    14341 gactttggga ccttagctgg cggtctgggt tgtttccctc tccacgatgg acgttagcac
    14401 ccaccgtgtg tctcctgagt atcactcttc ggtattcgca gtttgcatcg ggttggtaat
    14461 ccgggatgga cccctagccg aaacagtgct ctacccccga aggtgtccgc tcaaggctct
    14521 acctaaatag atttcgggga gaaccagcta tctcccggtt tgattggcct ttcaccccca
    14581 gccacaagtc atccgctaat ttttcaacat tagtcggttc ggtcctccag ttagtgttac
    14641 ccaaccttca acctgcccat ggctagatca ccgggtttcg ggtctatacc ttgcaactac
    14701 acgcccagtt aagactcggt ttccctacgg ctcccttatt cagttaacct tgctacaaaa
    14761 tataagtcgc tgacccatta tacaaaaggt acgcagtcac aagattactc ttgctcccac
    14821 tgcttgtacg cacaaggttt caggttctat ttcactcccc tcgccggggt tcttttcacc
    14881 tttccttcac agtactggtt cactatcggt caatcaggag tatttagcct tggaggatgg
    14941 tccccccatc ttcaaacagg atatcacgtg tcccgcccta cttgttgtta gcctagtacc
    15001 acaatggagt tttaaggtac gggattatca ccctctacga ttgtccttcc cagaacattc
    15061 ccctaacttt actgctatca ctaactggct ctttcgcgtt cgctcgccgc tactaacgaa
    15121 atctcggttg atttcttttc ctcggggtac ttagatgttt cagttctccc ggtttgcctc
    15181 acacagctat gtattcactg ggtgatagta ggttcttcac ctactgggtt tccccattcg
    15241 gacatcttgg attaaacgcc tcttatcgac t
//
LOCUS       DANLXD010000063        15045 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.063, whole genome shotgun sequence.
ACCESSION   DANLXD010000063 DANLXD010000000
VERSION     DANLXD010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15045)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15045)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15045
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.063"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            65..484
                     /locus_tag="PXD18_001612"
     CDS             65..484
                     /locus_tag="PXD18_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005704641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS sensor domain-containing protein"
                     /protein_id="HDL6302033.1"
                     /translation="MVPSNEAVLKAVHDTLVISTTDLQGVITYANDLFCKLTGFTREE
                     LIGQPHNIVRHPAVPKEVYKDMWDTIQAGKIWTGIVPNCGKGGVVYVVDTTVQPMFDE
                     TGKITGYISVRRVINDLMTNFEAVESAKEIFDDFYGE"
     gene            555..2111
                     /locus_tag="PXD18_001613"
     CDS             555..2111
                     /locus_tag="PXD18_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite reductase flavoprotein subunit alpha"
                     /protein_id="HDL6302034.1"
                     /translation="MSLIPHIHIAYGSESGNAEKLAQQLAIQPFLLPYSPTLSTLNET
                     DLSQLSAESLLLIVTSSFGDGEPPENADEFAEKLENLTACNLQYAIFGLGDITYDKFC
                     GYSKQLDSLLQQKQAKAVIARVDADLNYQEIFKQWLPLVEQALHSTNKETIQHSLSVQ
                     AYGEEMAYQAEVLEIKHLANSSPAVYHIRLSLKESGIFYQAGDLIYVKVQQPDRLLNE
                     YAEWFNDQNAVALLRHKELRLLSKNVLRDIQKICGSNELKDLTKISNKKALEQYVYGR
                     DLLDVLRDFDPNKSVTLADLEPILSNLAARAYSISSCGKTHPDYVDLCIRHVSYHLNG
                     RDYQGTASGYLSELQAGDFVSIFANANPNFRLPETLTAPVVMIGSGTGIAPHIAFLQA
                     LEQQYQGVESYLFFGERYRDKDFLYQTELENYLAKGTLTQLFTAFSRDQAEKFYVQDA
                     LSQQAELVWHLIQQGAYFYICGSKAMSKAIDAELIKIADQIGGDPYIDDFNNIIAKLV
                     AEGRLMRDVY"
     gene            complement(2169..2426)
                     /gene="rpsQ"
                     /locus_tag="PXD18_001614"
     CDS             complement(2169..2426)
                     /gene="rpsQ"
                     /locus_tag="PXD18_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005759643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HDL6302035.1"
                     /translation="MTDKIRTVQGKVVSDKMDKSFVVAIERTVKHPLYGKFIRRTTKL
                     HVHDENNEAKLGDVVEIKECRPISKTKSWTLVRVVEKAVVA"
     gene            complement(2426..2617)
                     /gene="rpmC"
                     /locus_tag="PXD18_001615"
     CDS             complement(2426..2617)
                     /gene="rpmC"
                     /locus_tag="PXD18_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HDL6302036.1"
                     /translation="MKAQELRNKSVEELNGELVNLLGEQFKLRMQAATGQLQQTHQLK
                     QVRRSIAQVKTVLTEKAGE"
     gene            complement(2617..3027)
                     /gene="rplP"
                     /locus_tag="PXD18_001616"
     CDS             complement(2617..3027)
                     /gene="rplP"
                     /locus_tag="PXD18_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HDL6302037.1"
                     /translation="MLQPKRTKFRKVHKGRNRGIAGGTEVSFGSFGLKAIGRGRLTAR
                     QIEAARRAMSRAVKRQGKIWIRVFPDKPITEKPLEVRMGKGKGNVEYWVALIQPGKVL
                     YEMDGVSEEVARNAFALAAAKLPFKTTFVTKTVM"
     gene            complement(3041..3748)
                     /gene="rpsC"
                     /locus_tag="PXD18_001617"
     CDS             complement(3041..3748)
                     /gene="rpsC"
                     /locus_tag="PXD18_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HDL6302038.1"
                     /translation="MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLN
                     KELANASVSRITIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQIN
                     IAEVKKPELDAKLVADSIASQLERRVMFRRAMKKAVQNAMKLGAKGIKVEVSGRLGGA
                     EIARSEWYREGRVPLHTLRADIDYSTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESE
                     KEPAAQPKKAPRGKGRK"
     gene            complement(3768..4100)
                     /gene="rplV"
                     /locus_tag="PXD18_001618"
     CDS             complement(3768..4100)
                     /gene="rplV"
                     /locus_tag="PXD18_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000447526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HDL6302039.1"
                     /translation="METIAKHRYARTSAQKARLVADLIRGKKVSVALEILTFTNKKAA
                     TLVKKVLESAIANAEHNDGADVDDLKVAKIFVDEGPSMKRVMPRAKGRADRILKRTSH
                     ITVVVSDR"
     gene            complement(4111..4386)
                     /gene="rpsS"
                     /locus_tag="PXD18_001619"
     CDS             complement(4111..4386)
                     /gene="rpsS"
                     /locus_tag="PXD18_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HDL6302040.1"
                     /translation="MPRSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSM
                     IGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHAADKKAKK"
     gene            complement(4417..5238)
                     /gene="rplB"
                     /locus_tag="PXD18_001620"
     CDS             complement(4417..5238)
                     /gene="rplB"
                     /locus_tag="PXD18_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HDL6302041.1"
                     /translation="MAIVKCKPTSAGRRHVVKVVNAELHKGKPFAALLDTKSKTGGRN
                     NLGRITTRHIGGGHKQHYRLIDFKRNKLDIPGVVERLEYDPNRSANIALVLYKDGERR
                     YILAPKGLTAGDQIQAGASAPIKVGNALPMRNIPVGTTVHNVELKPGKGGQIARSAGA
                     YVQIIAREGNYVTLRLRSGEMRKVLAECTATIGEVGNSEHMLRVLGKAGANRWRGIRP
                     TVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRHNKRTDKFIVRRRGK"
     gene            complement(5257..5562)
                     /gene="rplW"
                     /locus_tag="PXD18_001621"
     CDS             complement(5257..5562)
                     /gene="rplW"
                     /locus_tag="PXD18_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HDL6302042.1"
                     /translation="MIQQERLLNVLKAPHISEKATNNAEKGNTIVFKVALDANKVEIA
                     NAVEELFEVKVDSVRTVVVKGKTKRRGAKVGRRSDWKKAYVTLQEGQSLDFVEGAAE"
     gene            complement(5559..6161)
                     /gene="rplD"
                     /locus_tag="PXD18_001622"
     CDS             complement(5559..6161)
                     /gene="rplD"
                     /locus_tag="PXD18_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010304939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HDL6302043.1"
                     /translation="MELQVVGANALTVSETTFGREFNEALIHQVVVAYAAGARQGSRA
                     QKTRAEVSGSGKKPWRQKGTGRARSGDIKSPIWRSGSVTFAAKPQDHSQKVNKRMYRG
                     AIKSILSELVRQDRLVVVEKFEIDAPKTKVLAQKLKDMALNDALIITANVDENLFLAA
                     RNLYKVDVRDVQGIDPVSLIAFDKVVVTVDAVKQIEEMLA"
     gene            complement(6177..6806)
                     /gene="rplC"
                     /locus_tag="PXD18_001623"
     CDS             complement(6177..6806)
                     /gene="rplC"
                     /locus_tag="PXD18_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000579825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HDL6302044.1"
                     /translation="MIGLIGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDG
                     YSAIQVTTGSKKASRVTKPEAGHFVKAGVEAGRGLWEFRTTEGEEFTLGQEINVDIFT
                     DVKKVDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKK
                     MAGHLGAERVTVQSLEVVRVDVERKLLLVKGAVPGATNGDVIVKPAVKA"
     gene            complement(6832..7143)
                     /gene="rpsJ"
                     /locus_tag="PXD18_001624"
     CDS             complement(6832..7143)
                     /gene="rpsJ"
                     /locus_tag="PXD18_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014268624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HDL6302045.1"
                     /translation="MQNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPT
                     RKERFTVLISPHVNKDARDQYEIRTHKRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
                     G"
     gene            7587..8087
                     /locus_tag="PXD18_001625"
     CDS             7587..8087
                     /locus_tag="PXD18_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HDL6302046.1"
                     /translation="MQTINEIKEEIYPIFEPIIGTIRLKTYFSYYAVFKDGLMIALYQ
                     NGATYLRIAKKDIEYIRQYPKTCILCDEKIGIQSRKFHYIPQVLIDDTPKFSSLLFGI
                     IEELRTEKYKISQKRATQIRNLPNMNLKLERMLKKIGIHSIHDFTQEGYMSTFIKLIL
                     HRRLTV"
     gene            8375..9769
                     /gene="fumC"
                     /locus_tag="PXD18_001626"
     CDS             8375..9769
                     /gene="fumC"
                     /locus_tag="PXD18_001626"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005567406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HDL6302047.1"
                     /translation="MEFRIEKDTMGEVQVPADKYWAAQTERSRNNFKIGPEASMPAEI
                     IEAFGYLKKAAAYANHDLGVLAVEKRDLIAKACDEILANKLDDQFPLVIWQTGSGTQS
                     NMNVNEVVANRAHVLNGGKLGEKSIIHPNDDVNKSQSSNDTYPTAMHIAAYKKVVEHT
                     LPCVKRLQKTLAEKAEAFKDVVKIGRTHLMDATPLTLGQEFSAYAAQLAFGIKALENT
                     LPHLRELALGGTAVGTGLNTPQGYDVKVAEYIAKFTGLPFVTAQNKFEALATHDAIVE
                     THGALKQLAVSLYKIANDVRLLASGPRSGIGEILIPENEPGSSIMPGKVNPTQCEAMT
                     MVCAQVLGNDVTISFAGTQGHFQLNVYKPVMAYNFLQSAQLLGDACVSFDEHCAVGIE
                     PNYPRIKQQLDQSLMLVTALNTHIGYENAAKIAKTAHKNGTTLKEEAINLGLVTAEQF
                     DEWVRPEDMVGSLK"
     gene            9896..10006
                     /locus_tag="PXD18_001627"
     CDS             9896..10006
                     /locus_tag="PXD18_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005696979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDL6302048.1"
                     /translation="MKKLILIALVTTLGLSACGVKGPLYFPEQAPKHEQK"
     gene            10111..11361
                     /gene="lysA"
                     /locus_tag="PXD18_001628"
     CDS             10111..11361
                     /gene="lysA"
                     /locus_tag="PXD18_001628"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDL6302049.1"
                     /translation="MNHFEYKNNQLFAEEVAIADIIEQYGTPAYVYSRSTLERHWHAF
                     NNAFGSHPHLVCFAVKSNSNIALLNVMARLGSGFDIVSQGELERVLAAGGEASKVVFS
                     GVAKSHSEIKRALEVGIRCFNIESVSELHRINQVAGELGKIAPISLRVNPDVDAHTHP
                     YISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLTELQPFLDATDRLI
                     ILMEQLREDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKGYENLEIIIEPG
                     RAITANAGILVTKVEYLKQNEDRNFAIVDTGMNDMIRPALYEAYMQITEVDKTLNRDK
                     AVYDVVGPICETSDFLGKQRELAISEGDLIAIRSAGAYGAAMSSTYNSRPQAAEIMVD
                     GNQAHLIKARATFADLWRLEKLLP"
     gene            11375..12004
                     /locus_tag="PXD18_001629"
     CDS             11375..12004
                     /locus_tag="PXD18_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HDL6302050.1"
                     /translation="MKLYGLTGACSFVPHVALEWVKLRANQDYAFQAVSREFIKSAEY
                     LALNPRGNVPLLVDGDLALTQNQAIVHYLDELYPEAKLFGSKTARDKAKAARWLAFFN
                     SDVHKSFVPLFRLPSYAEGNETLTKTIRQQSAEQILEQLAFANAHLENHIFFGEEISV
                     ADAYLYIMLNWCRLLGLDFSHLSQLSAFMQRVEADQGVDNVREQEGLKG"
     gene            12075..13520
                     /gene="tldD"
                     /locus_tag="PXD18_001630"
     CDS             12075..13520
                     /gene="tldD"
                     /locus_tag="PXD18_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HDL6302051.1"
                     /translation="MLNQVSNSLLAPSGLELSHLTQVLDHFSGRHIDYADLYFQLSQD
                     ESWSLEDSIIKEGGFYIDRGFGVRAISGEKTGFAYADQITLKQLEQCAAAARSISPTS
                     GQLSVKNFKKTTACSRYPAINPLETISREQKVELLHLVDKTARMADPRVIQVNANLSA
                     VYEEMLVAATDGTLAADIRPLVRLSVSVLVEQNGKRERGSAGAGGRFGLDWFLAPSET
                     GFSRAESLTKEAVRQALVNLTAIPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRK
                     ESSLFSGKIGQMVTSELCTIVDDGTVPNMRGSITVDDEGVPSQRNVLIENGILKGYMQ
                     DKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYLTEGNHEFEEMIESVEYGLYAPHFS
                     GGQVDITSGKFVFSTAEAYLIEKGKITKPVTGATLIGSGIEAMQQVSMVGKKMELDPG
                     IGTCGKEGQSVPVGVGQPTVKLDKITVGGRG"
     gene            13584..14465
                     /gene="prmA"
                     /locus_tag="PXD18_001631"
     CDS             13584..14465
                     /gene="prmA"
                     /locus_tag="PXD18_001631"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HDL6302052.1"
                     /translation="MAWVQIRLNSTDKQAEEISDFLTEIGAVSVTFMDSQDTPIFEPL
                     PGETRLWGNTDVVGLFDAETDMNLIVEALKTSKLVDENFAHKIEQIEDKDWEREWMDN
                     FHPMQFGKRLWICPSWREVPDPNAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLEGK
                     TVIDFGCGSGILAIAALKLGAKQAIGIDIDPQAILASQNNAEANGVAEKLQLFLAKDQ
                     PRELQADVVVANILAGPLKELAPNIITLVKPNGNLGLSGILATQAESVCEAYSEAFTL
                     DPVVEKEEWCRITGRKI"
     gene            complement(14640..14715)
                     /locus_tag="PXD18_001632"
     tRNA            complement(14640..14715)
                     /locus_tag="PXD18_001632"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14680..14682),aa:Trp,seq:cca)
     gene            complement(14781..14857)
                     /locus_tag="PXD18_001633"
     tRNA            complement(14781..14857)
                     /locus_tag="PXD18_001633"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14821..14823),aa:Asp,seq:gtc)
     gene            complement(14868..14983)
                     /gene="rrf"
                     /locus_tag="PXD18_001634"
     rRNA            complement(14868..14983)
                     /gene="rrf"
                     /locus_tag="PXD18_001634"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT         4449 a         3262 c         3031 g         4303 t
ORIGIN      
        1 tttatactga taaacacata acaaaattca tttatattaa tggagattca acacggctga
       61 acaaattgtt ccttcaaatg aagctgtttt aaaagcagtc cacgatactt tagttatttc
      121 aacaactgat ttacaaggtg ttattactta cgctaacgac cttttctgca aattaaccgg
      181 ttttacccgt gaagaattaa ttggacaacc gcataatatc gtacgccacc cagctgtacc
      241 aaaagaagtt tataaagata tgtgggatac aatccaagcc ggtaaaatct ggacaggtat
      301 cgtaccaaac tgcggtaaag gcggtgtagt ttatgtggtt gataccaccg ttcaaccaat
      361 gtttgatgaa acaggcaaaa ttacaggcta tatcagcgtt cgccgtgtaa ttaatgattt
      421 aatgaccaac tttgaagcag tagaatcagc aaaagaaatc tttgatgact tctacggtga
      481 ataattaaaa aacaatgatt gcgtgtaaaa gatgatctct tttacacgca attttttatt
      541 ttcgaggagt ttgtatgtct ctcattcccc atatccacat tgcttatggt tcggagtctg
      601 gtaacgcaga aaagcttgcc caacaattag ctatccaacc ctttttactt ccctactcac
      661 ccacactttc tacattaaac gaaaccgatt taagccaatt atctgccgag agtttattgc
      721 ttattgtaac cagctccttt ggtgatggcg aaccacctga aaacgccgat gaatttgcag
      781 aaaaattgga aaatttgacc gcttgtaatc tgcaatatgc gatattcggg ctaggtgata
      841 ttacttatga taaattctgt ggctatagca aacaactaga ttcattatta caacaaaaac
      901 aagctaaagc tgtgattgca agggttgatg ccgatttaaa ctatcaagaa atttttaaac
      961 aatggctacc cctagtggag caggcattac attcaacaaa caaagaaacg atccaacatt
     1021 ccctttctgt tcaagcttac ggcgaggaaa tggcatacca agcagaagtg ttggaaatta
     1081 agcatttggc aaactcaagc cctgcggtgt atcacattcg tttatcatta aaagagagcg
     1141 gtattttcta tcaagcaggg gatttaattt atgtcaaagt gcagcaacca gacagactat
     1201 taaatgaata tgcagaatgg tttaacgatc aaaatgcagt tgcattacta cgccataaag
     1261 aactccgact actaagtaaa aatgtactgc gtgatattca aaaaatttgc ggcagtaatg
     1321 aactcaaaga tttaactaaa atttccaata aaaaagcatt ggaacaatat gtctatgggc
     1381 gggatttatt agacgtatta cgcgattttg acccaaacaa aagcgtgaca ttagccgatt
     1441 tagagccaat tttatctaac ttagccgcac gagcctattc aattagctct tgcggtaaaa
     1501 ctcaccctga ttatgttgat ttatgtatcc gccacgtttc gtatcattta aacggtagag
     1561 attatcaagg gactgcaagt gggtatttat ccgaattaca agcgggcgat tttgtctcga
     1621 tttttgcaaa tgccaatccg aatttccgtt tacccgaaac attaaccgct ccggtggtga
     1681 tgattggctc aggtactggc attgctccgc atatcgcatt tttacaagcg ttagagcagc
     1741 aatatcaggg ggttgaaagc tatttattct tcggcgagcg ttatcgtgat aaagattttc
     1801 tgtatcaaac ggaactggaa aattacttag caaaaggcac cttaactcag ctgtttactg
     1861 ctttttcacg tgatcaggca gagaagtttt atgtgcaaga tgccctatcg caacaagcag
     1921 agttagtttg gcatttaatt cagcaagggg cttatttcta tatttgtggt agcaaagcaa
     1981 tgagtaaagc aatagatgcg gaactcatca aaattgcaga tcaaattgga ggcgatcctt
     2041 atattgatga tttcaataat attattgcaa aattggtcgc agaaggccga ttaatgcgag
     2101 atgtatatta gcaaatgaaa aaaactaaaa acccagcaaa agctgggttt ttatttaatc
     2161 atagttcatt aagcaacaac tgctttctca actacacgaa ctaaagtcca agatttagtt
     2221 tttgaaatag gacgacattc cttaatttca acaacatcac ctaatttagc ttcattgttt
     2281 tcatcgtgta catgaagttt agtagtacga cggataaact taccgtataa cggatgttta
     2341 actgtacgtt cgatagcaac aacaaatgat ttatccattt tgtcgctaac cactttacct
     2401 tgtactgtac gaattttatc agtcattatt cacccgcctt ttcggttaat acagttttaa
     2461 cttgtgcaat actacgacgc acttgtttta actggtgggt ttgttgaagc tgaccggtgg
     2521 ctgcttgcat acgcaatttg aattgttcac ctaaaaggtt cactaactca ccattcagct
     2581 cttcaacact tttattacgt agttcttgag ctttcattac atcaccgtct tagttacaaa
     2641 tgtggttttg aacggaagtt tagctgccgc taatgcaaac gcattgcgtg caacttcttc
     2701 agaaacacca tccatttcat agagaacttt acccggttgg attaaggcta cccagtactc
     2761 aacgttacct ttacctttac ccatacggac ttctaatggt ttttcagtaa ttggtttgtc
     2821 tgggaacaca cggatccaga ttttaccttg acgtttaacc gcacggctca tcgcacgacg
     2881 agcagcttca atttgacgag ctgttaaacg accacggcca atagctttta aaccaaatga
     2941 accgaagctc acttctgtgc cacccgcgat accacggtta cggcctttgt gtactttacg
     3001 gaattttgtg cgttttggtt gtaacattca gtgattctcc ttatttacga cctttgccac
     3061 gtggcgcctt tttaggctgt gccgctggtt ctttttcaga ttcaatcact gcagccattc
     3121 caccaagaat ttcacctttg aagatccaca cttttacgcc gattacgccg taagtagtgt
     3181 gagcttcagc agtactataa tcgatgtctg cacgaagcgt atgtagaggt acacgacctt
     3241 cacgatacca ttctgagcga gcaatttctg caccacctaa acgaccgcta acttcaactt
     3301 tgataccttt agcacctaat ttcatcgcgt tttgaactgc ttttttcatt gcacgacgga
     3361 acatcacacg acgttcaagt tgagaagcga tgctatctgc gactaatttc gcatctagct
     3421 ctggtttttt cacttcagcg atgttgattt gagctggaac gccagcgatt ttcgcaactg
     3481 cgttgcgtaa tttttcaaca tcttcacctt ttttaccgat aacgataccc gggcgagctg
     3541 tgtgaatagt tacacgaatg ctttttgcag gacgctcaat agtgatgcgt gatacagaag
     3601 cgttcgctaa ctctttgttt aaaaatttac gtactttgaa gtcgccgtct aagttatcag
     3661 cgaaatcttg tgtattcgcg aaccaagtag agttccaagg tttaacaata cctaggcgaa
     3721 taccattagg atgtactttc tgacccattt gttattctcc tacttaatta acgatctgac
     3781 acaaccacag tgatgtggct tgtacgtttt aaaatacgat ctgcacgacc ttttgcacgt
     3841 ggcattacac gtttcatgct tggaccttca tcaacgaaga ttttagcaac tttaagatca
     3901 tcgacatctg caccgtcatt atgctctgcg tttgcaatag ctgactctaa tactttctta
     3961 acaagcgtcg ctgctttttt gttagtgaaa gttaagattt ctaatgctac agaaactttt
     4021 ttaccgcgaa ttaaatcagc aactaagcga gctttttggg cagaagtacg agcgtaacga
     4081 tgtttagcaa tagtttccat cttttacctc ttatttctta gctttcttat ctgcggcgtg
     4141 accgcggtat gtacgagtcg gtgcaaattc acctaattta tgaccgatca tttcgtcgga
     4201 aacataaaca ggaacgtgct gacgaccatt atggactgcg atggtcaaac caatcattga
     4261 tggaatgatc attgaacgac gggaccaagt tttaattggt tttttatccc cgctttccac
     4321 cgccttctct accttcttca acaagtgtag gtcaaggaaa ggacctttct tgagggaacg
     4381 tggcattggt gtttaccttt tagttaatga attaaattat ttgccacgac gacgtacgat
     4441 gaatttatca gtacgtttgt tgtgacgagt tttcttacct ttggtttgaa cgccccaagg
     4501 tgtaacagga tgtttaccga agttacgacc ttcaccacca ccgtgtgggt gatctaccgg
     4561 gttcattgca gtaccacgaa cagttggacg aatacctctc caacggtttg cacctgcttt
     4621 accaagaacg cgaagcatat gctctgagtt acctacttca ccaatggttg cagtacactc
     4681 agctaatact ttacgcattt cgcctgaacg aagacgtaaa gttacatagt taccttcacg
     4741 ggcaatgatt tgaacgtaag caccagcaga acgtgcaatt tgaccacctt taccaggttt
     4801 taattcaacg ttgtgtacag ttgtacctac tgggatgtta cgcattggta atgcgttacc
     4861 tactttaatc ggagctgaag cacccgcttg aatttgatca ccagcagtta aaccttttgg
     4921 tgctaaaata tagcgacgtt caccatcttt ataaagtact aatgcgatat tcgcagaacg
     4981 atttggatcg tattctaaac gctcaacaac acccggaatg tctaatttat tacgtttaaa
     5041 atcaattaaa cggtagtgtt gtttgtgacc gccaccaatg tgacgagttg tgatacgacc
     5101 taagttgtta cgaccaccag ttttagattt agtatctaaa agtgctgcaa aaggtttacc
     5161 tttgtgaagc tcagcgttta caactttaac aacgtgacga cgaccagcgg aggtcggctt
     5221 acatttaacg atagccattt attttatctc ctctgattac tctgccgcac cttcaacgaa
     5281 gtcaagcgat tgaccttctt gaagagttac ataagctttt ttccagtcac tacgacgacc
     5341 aactttagca ccacggcgtt tagttttacc tttaactact acggtacgaa cagaatcaac
     5401 ttttacttca aaaagttctt caactgcatt tgcaatctca actttgtttg catctaatgc
     5461 aactttgaat acgattgtat tgcctttttc tgcgttgttt gtcgcttttt cagagatatg
     5521 tggtgcttta agcacgttta gcaaacgttc ttgttgaatc atgctaacat ctcctcaatt
     5581 tgttttactg catctacggt tacaaccact ttatcgaaag caattaagct aactgggtca
     5641 ataccttgca catcacgcac atcaacttta tataagttgc gtgctgctaa gaataaattc
     5701 tcatctacgt ttgcagtaat gataagagcg tcatttaacg ccatatcttt taatttttgt
     5761 gctaatactt tagtttttgg tgcatcgatt tcgaatttct caacaaccac taaacggtct
     5821 tgacgaacta attcagaaag aatgcttttg attgcaccac ggtacattct tttgttcact
     5881 ttttggctgt gatcttgtgg tttcgcagca aaagttacac tacccgaacg ccaaattggt
     5941 gatttaatat caccagaacg tgcacggcct gtaccttttt gacgccaagg ttttttacct
     6001 gaaccagaca cttcagcacg agttttttga gcacgagatc cttgacgagc acctgctgca
     6061 taagcaacaa ctacttggtg gattaatgct tcattgaact cacgtccgaa ggtagtttca
     6121 gaaacagtta gtgcgtttgc acctacaact tgtaattcca tctctatctc ctagacttat
     6181 gctttaactg ccggttttac gataacatca ccattagttg caccaggaac ggcaccttta
     6241 actaataata atttacgctc aacatctaca cgaacaactt caagtgattg aacggttaca
     6301 cgctctgcac ctaagtgtcc tgccattttt ttacctttaa acacacgacc tggagtttgg
     6361 ttttgaccaa tagaaccaag tacacgatgt gataaagagt taccgtgagt tgcatcttga
     6421 gtacggaagt tccaacgttt aacaccacct tggaagcctt taccttttga tgtaccagta
     6481 acatcgactt ttttaacatc agtaaagatg tcaacattga tttcttgacc taaagtgaat
     6541 tcttcacctt cagtagtacg aaattcccat aaaccgcgtc cagcttcaac acctgctttc
     6601 acgaaatgac ctgcttctgg tttagttaca cggctagctt ttttagagcc agtagtaact
     6661 tgaattgcag agtagccatc gttttcaagg gttttaactt gagtaacacg gttggcttcg
     6721 atttcgataa cggtaactgg aatagacacg ccgtcttcag tgaaaacgcg ggtcatacca
     6781 actttacgac cgattaaacc aatcattgta ataacctctt aaaattccca attaacctag
     6841 actaatctga acgtcaacgc cagcagctag atctaaacgc attaatgcat caacagtttt
     6901 ttctgttggt tcaacaatat caactaaacg tttgtgagta cggatttcat attggtcacg
     6961 tgcatcttta ttcacgtgtg gagaaatcaa tacagtgaaa cgttctttac gagttggtaa
     7021 aggaattgga ccacgaactt gtgcaccagt acgtttagct gtttctacga tctccgcagt
     7081 agattgatca attaaacgat gatcaaatgc ttttaagcgg atacggattc tttggttctg
     7141 cattagacca gagctccaat taaaaaattt agctaataaa aaaaccaaac taccacttaa
     7201 caaattagtt aagggagctc agttaaacct atatagttcc aaaattagga acattgtata
     7261 cactacaata tctgtagtgc catttgataa atgattacat caaatgtctt tagataccta
     7321 aagctttgct atcatactcg tttcatttcc cttatgcaag taatttttgt tttttatatt
     7381 gacaataatt tgattcgata aaacttctaa agatacacaa tatttccaat acttcatttg
     7441 aagtggctca aataaattgt atttatgcat ttttttattc aaacttttcg agccacttca
     7501 caaatctaaa aaatcctagt tgaaatttaa tccataagag tatttattat taaataagtt
     7561 tcatgacctt acatcggagt acatatatgc aaacaatcaa tgaaattaaa gaagaaatct
     7621 accctatatt tgagcctatc attggaacaa ttcggctaaa aacctacttt tcctactacg
     7681 cagtttttaa ggatggattg atgattgcat tgtatcaaaa tggagcaact tatttacgta
     7741 ttgcgaaaaa agatattgaa tacattcgtc agtatcctaa aacctgtatc ttatgcgatg
     7801 aaaaaattgg tatacaaagt agaaaatttc attatattcc gcaagttctc atagatgata
     7861 caccaaaatt tagctcgcta ctctttggaa ttatagagga actccgaacg gagaagtaca
     7921 aaataagcca aaagcgagct acacaaatcc gaaacctacc aaatatgaat ttaaagttag
     7981 aaagaatgtt gaaaaaaata gggattcatt ccattcatga ttttactcaa gaagggtata
     8041 tgtcaacttt tatcaaactg attctccacc gaagacttac tgtttaagct aaacggagct
     8101 ttaaatcacc aatatattta caccttcaca gatcaacaaa aaagggaact aatgcaagaa
     8161 gcaaatcaag cgctatataa ttcaggccta agaaaaagat ttaacgccct gtagttaaat
     8221 aatgtgatcc aaatcataaa atataaaaaa accaataagg aattgcaatt cgcagttcct
     8281 ttctttttct tttatatgct agtatcacct tatacctcta aattattagt gcctactgat
     8341 tttcaattaa tccaacaatt taggagagcg catcatggaa ttccgtatcg aaaaagacac
     8401 aatgggcgaa gtgcaagttc ctgccgataa atactgggcg gcgcaaaccg agcgttcacg
     8461 caataacttc aaaatcgggc cggaggcatc aatgccggcg gaaattatcg aggcgtttgg
     8521 ctatctgaaa aaagcggctg cctatgctaa tcacgattta ggcgtactag cggtcgaaaa
     8581 acgggattta attgcaaaag cctgtgatga aattttggcg aacaaactcg atgatcaatt
     8641 cccgctggtg atttggcaaa ccggctcggg tacgcagtca aatatgaacg tgaatgaagt
     8701 cgtggcaaac cgtgcacacg tgttaaacgg cggcaagctg ggtgaaaaat cgattattca
     8761 cccgaatgat gatgtgaata aatcccaatc ttctaacgac acctacccaa ctgcaatgca
     8821 catcgctgct tacaaaaaag tggtggaaca caccctacct tgtgtgaaac gtctgcaaaa
     8881 aaccttagcg gaaaaagccg aagcctttaa agatgtggtc aaaatagggc gtactcactt
     8941 aatggatgct accccgctca cgctcggtca agagttctct gcctatgcag cacagttagc
     9001 attcggcatc aaagcattgg aaaacaccct gccacacctg cgtgagctgg cactcggcgg
     9061 cacagcagtc ggcaccggct tgaatacccc gcaaggttac gatgtgaaag tggcggaata
     9121 cattgcgaaa ttcaccggtt taccgttcgt taccgcccaa aacaaatttg aggcattagc
     9181 gactcacgat gcgattgtcg aaacccacgg tgcattaaaa cagcttgcgg tgtcgctcta
     9241 caaaattgcc aacgatgtcc gtttattagc ctccggtcct cgttcaggca ttggcgaaat
     9301 tctgattccg gaaaacgagc cgggttcatc aattatgccg ggtaaagtaa acccaaccca
     9361 atgcgaagca atgacaatgg tatgtgccca agtattaggc aacgatgtaa ccatctcttt
     9421 tgccggcacg caagggcatt tccaactgaa tgtctataaa ccggtgatgg cgtacaactt
     9481 cctgcaatcg gctcaactgc taggcgatgc gtgcgtgtcg tttgacgaac actgtgcagt
     9541 cggcattgaa ccgaactacc ctcgcattaa acaacagctc gaccaatcgc tgatgttagt
     9601 gaccgcatta aatactcaca ttggttatga aaatgcagcg aaaatcgcca aaactgccca
     9661 caaaaacggc acaacactga aagaagaggc gattaactta ggcttagtca cggcagaaca
     9721 gttcgatgaa tgggttcgtc cggaagatat ggttggcagc ttgaaataag cccaaccctt
     9781 ctcttgtaat ctgatttaca cctcaatcta ccggtaagat tgaggtgtaa ttttttatag
     9841 cgagggtact gattttgttt tagaatgaag catcattttt taagcggaaa aacctatgaa
     9901 aaaactcatt ttaatcgcat tagttactac tttaggctta agtgcttgtg gggtcaaagg
     9961 cccactctac ttccctgagc aagcccctaa acatgaacaa aaataagcat tgcaagcggt
    10021 ctgttttggc taaaattttg caaatttttg tgaaaaaatg accgcttgtt gcctcttttc
    10081 tttcaaaatc ccaaacacaa cggactttca atgaaccatt ttgaatataa aaacaaccaa
    10141 ctttttgctg aagaagtcgc tattgccgat attatcgagc aatacggcac gccagcttat
    10201 gtttactcca gatctaccct tgaacgccac tggcacgcat tcaataatgc gtttggctcg
    10261 cacccacatt tagtttgctt tgcagtcaaa tccaactcta acattgcctt gttaaatgta
    10321 atggctcgtc tcggttcagg ctttgatatt gtctctcaag gcgagttgga gcgtgtctta
    10381 gctgccggcg gcgaagcctc taaagttgtc ttttccggtg tggcaaaatc gcacagcgaa
    10441 atcaaacgag cattggaagt cgggattcgt tgctttaaca ttgaatcggt ttccgaactt
    10501 caccgcatta accaagttgc cggtgaacta ggcaaaatcg caccgatttc actgcgggta
    10561 aacccggatg tggacgccca cactcaccca tacatttcca ccggtttaaa agaaaacaaa
    10621 ttcggcgtga gcgttactca agcccgtgaa gtgtatcgct tagccaaaac cttaccgaat
    10681 gtgaaaatta ccggtatgga ttgtcacatc ggttcgcaat taaccgaatt gcaacctttt
    10741 ttagatgcaa cggatcgctt aatcatctta atggagcaac tgcgtgaaga cggcattgag
    10801 ctacaccact tagacttagg tggcggttta ggcgtgcctt acaacggcga agagcctccg
    10861 catccgaccg aatatgccaa agccttgctg gaaaagctca aaggctatga aaacttagaa
    10921 atcattattg aaccggggcg tgccattacc gcaaatgccg gtattttagt gacgaaggtg
    10981 gaatacttga aacaaaatga agatcgtaat tttgcgattg tcgataccgg tatgaacgat
    11041 atgattcgcc cggctctgta tgaagcctat atgcaaatta cggaagtgga taaaacctta
    11101 aaccgtgaca aagctgttta cgatgtggtc ggtccgattt gcgaaacctc ggatttctta
    11161 ggcaaacaaa gagaattggc aatttctgaa ggggatttaa tcgctattcg ttctgccggt
    11221 gcttatgggg cggcgatgtc ttcaacctac aactctcgcc cacaagcggc agaaattatg
    11281 gttgatggca accaagccca tttaattaaa gcccgagcca cttttgctga tttatggcgt
    11341 ttagaaaaat tattacctta atgaggaaga aaagatgaaa ttatatggat taaccggtgc
    11401 ttgttcattt gtaccacacg ttgccctaga gtgggtgaaa ttgcgtgcca atcaagatta
    11461 tgcgtttcaa gctgttagcc gtgaatttat taaatcggcg gaatatctgg ctttaaaccc
    11521 tcgtggtaac gtaccattgt tggttgatgg cgacttggcc ctcacgcaaa accaagctat
    11581 cgtccactat ttagacgagc tttatccgga agctaaatta ttcggcagca aaaccgctcg
    11641 tgataaagcc aaagcggctc gttggttagc ttttttcaat tcagatgtgc ataaatcatt
    11701 cgtgccactg ttccgcttgc caagttatgc ggaaggcaat gaaacgctca ccaaaactat
    11761 tcgccaacaa tcggctgagc aaattttaga acaactggct tttgcgaatg ctcatttaga
    11821 aaatcatatt ttctttggcg aagaaatttc ggttgccgat gcgtatctct acattatgct
    11881 caactggtgt cgcctactag ggttggattt ctctcatctt tcccaacttt ctgcctttat
    11941 gcaacgagtg gaggcagacc aaggcgtaga taatgtgcgt gagcaagaag gcttaaaagg
    12001 ttaattcacc attgttcatt taagacggta gattttatgt taaaatctac cgtcttttat
    12061 ttttaggaat caccatgcta aatcaggttt caaacagctt gcttgctcca agtgggcttg
    12121 aattatcgca cttaactcaa gtgttagatc acttctccgg ccgtcatatt gattatgccg
    12181 atctctactt ccaactcagc caagacgaaa gctggagctt ggaagacagc atcatcaaag
    12241 aaggcggttt ttatatcgac cgagggttcg gtgtgcgagc catatcaggc gaaaaaaccg
    12301 gctttgccta cgccgatcaa atcacgttaa aacagcttga gcaatgtgcc gctgccgcac
    12361 gttcaatcag cccaacaagc ggtcaattat cggtaaaaaa tttcaaaaaa acgaccgctt
    12421 gttctcgcta cccggcaatc aacccgctag agaccatcag ccgtgaacaa aaggtcgaat
    12481 tgctccattt ggtggataaa accgctcgaa tggcagatcc gagagtgatt caagtgaatg
    12541 cgaatctctc agcggtatat gaagaaatgt tagtggcagc gactgacggc acactggctg
    12601 cggatattcg cccgttagtg cgtttatctg tgtcggtact ggtggaacaa aatggcaagc
    12661 gtgaacgagg ttcagcaggt gccggtggtc gctttggttt agattggttc ttagcaccaa
    12721 gcgaaaccgg ctttagccgt gcggaatcgc ttaccaaaga agccgttcgc caagccctcg
    12781 ttaatctcac agccattcct gcaccggcag gcacgatgcc gattgttctc ggtgctggct
    12841 ggccgggcat tttgctccac gaagcagtcg gacacggctt ggagggtgat tttaaccgta
    12901 aggaatcttc gctcttcagt ggtaaaatcg ggcaaatggt cacctctgag ctttgcacca
    12961 ttgttgatga cggtacggtg ccgaatatgc gaggctcaat cacggtagat gacgaaggcg
    13021 tgccttcgca acgtaatgtg ttaattgaaa acggcattct aaaaggctat atgcaagaca
    13081 aactcaatgc ccgcctgatg ggagttgccc caaccggcaa cggcagacgg gaatcttacg
    13141 ctcatttgcc gatgccacga atgaccaaca cctacctcac cgaaggcaat cacgaatttg
    13201 aagagatgat tgaatcggtc gaatacggtt tatatgctcc tcacttcagt ggtggacaag
    13261 tggatattac ctccggcaaa tttgtgttct ccaccgccga agcctactta atcgaaaaag
    13321 gcaaaatcac caaacctgtt accggtgcaa ccctgatcgg cagcggcata gaagcaatgc
    13381 aacaagtttc aatggtcggc aaaaaaatgg aactcgaccc cggcatcggc acttgtggca
    13441 aagaagggca atccgtacca gtcggcgtag ggcagcctac agtgaagttg gataaaatta
    13501 cggtgggggg aagagggtaa tctctccccg tttgcaaaat ataaagaaaa tatcaccgct
    13561 tgtagcgata aaaggaaaac aaaatggctt gggtacaaat tcgtttaaac agtacagata
    13621 aacaggctga ggaaatcagc gattttttaa ccgagattgg agcggtgtca gtgactttta
    13681 tggatagtca agatacccca atttttgaac ctcttccggg ggaaacccgt ctttggggaa
    13741 ataccgatgt ggttgggctt ttcgatgcgg aaactgatat gaatcttatc gtagaagcac
    13801 taaaaaccag caaattggtg gacgaaaact ttgctcacaa aatcgagcaa atcgaagaca
    13861 aagactggga acgggagtgg atggataatt tccacccaat gcagtttggc aaacggttat
    13921 ggatctgccc aagctggcgt gaagtaccag acccgaatgc agtgaatgtt atgttagacc
    13981 ctggtttagc atttggcacc ggcacacacc caacgacctc gctttgctta caatggttag
    14041 atagcttaga tttagaaggc aaaacggtta tcgacttcgg ctgtggctcc ggtattttag
    14101 ctatcgctgc acttaaactc ggtgcaaaac aagccatcgg gattgatatc gacccacagg
    14161 cgattttagc tagtcaaaac aatgctgagg cgaacggcgt agcagaaaaa ctacaactat
    14221 tcttagccaa agatcagcca agagagttac aagccgatgt cgttgttgcg aatattctag
    14281 ccggcccact caaagagtta gcaccgaata tcatcacgct ggttaaacca aacggcaatt
    14341 taggcttatc cggcattctt gctactcagg ctgaaagtgt gtgtgaggct tatagcgaag
    14401 cctttacgct agaccctgtt gtagaaaaag aagaatggtg tcgtattaca ggccgcaaaa
    14461 tctaatataa gaagccctgt tttaaacagg gcttactttt tgataaattc tactactctt
    14521 tacctgtctt gggaatcgtt ctccctaaat taattaacac aagcggtaga aataacagga
    14581 aaatttacaa attacataaa tgaaaaaagc cgactgaaat cagtcggctt tctaaataat
    14641 ggcaggggcg gagaggctcg aactcccaac acccggtttt ggagaccggt gctctaccaa
    14701 ttgaactacg cccctattga taggtattca ttttgcactt ataggggcga attactattc
    14761 gcccctgcat taaagattat tggcggaacg gacgggactc gaacccgcga ccccctgcgt
    14821 gacaggcagg tattctaacc agctgaacta ccgctcctaa attaatagat tgataatgcc
    14881 ctactctcac atggcgaatc accacactac catcggcgtt actgcgtttt acttctgagt
    14941 tcggtatgga gtcaggtaga gccacagcac tctggttatc aatcaaattc tttcatttag
    15001 tcagtttact aaaatatagt ttatactttc taataaactc actaa
//
LOCUS       DANLXD010000064        15008 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.064, whole genome shotgun sequence.
ACCESSION   DANLXD010000064 DANLXD010000000
VERSION     DANLXD010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15008)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15008)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15008
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.064"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..167)
                     /locus_tag="PXD18_001635"
     CDS             complement(<1..167)
                     /locus_tag="PXD18_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL6302053.1"
                     /translation="MKAQQLKNAILQLAIQGKLVPQDPNDEPASELLCKIQAEKDRLI
                     AEGKIKKNKKTA"
     gene            complement(373..2034)
                     /locus_tag="PXD18_001636"
     CDS             complement(373..2034)
                     /locus_tag="PXD18_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA binding domain-containing protein"
                     /protein_id="HDL6302054.1"
                     /translation="MLTWEHIEKMIAHQQFIREKAEIEYKEAKNSVPKDLWHTYSAFA
                     NSNGGFILLGIKENEQGHFPELLISGVNDPDKVIDELFSQSRSEKVSKSLLKDNDVKI
                     FQVENKSVIAIYVKAADILDRPIHLNGDYRLSYVRLNSGDHKLTSSELRSFISSYSQK
                     DADGRIVPYASIDDISLSTLDKYRNLLKAHNSTSKLLTLSDEKLLQEIGAYKKDLAQN
                     SEGITNAGLLMFGKHYAITSIFPHFFFEYYEEAGDVKRYTLRITDFDLEEGNLFEFYL
                     KIVPLIQELGKDKHFKLDNLTRTEENEITDGLREALINAITHADYFNNVRHLKVIKTK
                     DNKLIFENAGVMLVDIPTAIAGQRSECRNSIIHNLFHRLGLCERQGQGVRDIYSYWQS
                     RNFNSPLLESEIDYTKLTLTFQSGMIADFEEKFTACFGENFSELQPIQKDCLLFIAFN
                     QGKAMFAELAQKLPQYPRRNITLALARLKEKGLLTSSGSPRKQLYTLVNLEWIITEKS
                     QDDYFNPPFDQLDKASESKGAPPKKSKVKQVKQLPQNKANKLPPK"
     gene            complement(2047..3516)
                     /locus_tag="PXD18_001637"
     CDS             complement(2047..3516)
                     /locus_tag="PXD18_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HDL6302055.1"
                     /translation="MSLNNIVKRLQDVMRNDAGINGDAQRIEQIVWILFLKIYDAKEQ
                     EWELENDEYHSILPNFLRWQNWAEDKKDGKAMTGDELLSFVNNELFPTLKNLPISADT
                     PMNQRIIRAAFEDNNNYMKNGVLLRQVINIIDEIDFAHYQERHAFGDIYENILKSLQS
                     AGNAGEFYTPRAVTDFMVQAIKPKLGERIADFACGTGGFLTSALKVLESQIQTLSDRT
                     LFNNSVYGIEKKALPHLLCITNLLLHDIDNPNVHHDNALEKSVKDYTENDKFDVILMN
                     PPYGGSEIEQIKKNFPTALQSSETADLFMSVIMYRLKQNGRAAVVLPDGFLFGTDNAK
                     VAIKKKLLEEFNLHTIIRLPHSVFAPYTSITTNILFFDKTEPTRETWVYRLDMPQGYK
                     NFSKTKPMKLEHFNEVVEWWGNRQVIEVEGFDKAKSFTLKEMSDRQYNLDLCGFPHEE
                     EEILPPDELIADYQRKRTAYNADIDKILAEITDILGIKL"
     gene            complement(3564..5915)
                     /locus_tag="PXD18_001638"
     CDS             complement(3564..5915)
                     /locus_tag="PXD18_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDL6302056.1"
                     /translation="MYTLQELKQMNEQEIRSRLISPAIRNAGWSDRQIGEEYTFKTNK
                     RFTDGQVVVDPKTTQTKRIEAKRVDYLLYTSANQKIAVVEAKDNHHSSRHGLQQAMTY
                     ARLLDVPFAYSSNGDEFVEHDFITGVQRTLPMSAFPTPDELHQRWAKQYTTEELKIIQ
                     QPYYTSSTDTFKEPRYYQEIAINRTVEAVAKGQQRILLVMATGTGKTYTAFQIIHRLK
                     TSGAKKKILFLADRNVLVDQPMMQDFKPFKDKMVKVSNKKLDSAYEVYLALYQQLDGE
                     TDNELFKQFQPSFFDLIVIDECHRGSAKEDSDWRAILKYFKDATHIGMTATPKETDDA
                     SNITYFGEPIYTYSLKQGIEDGFLAPYRVIRVDLDCDLKGWRPTKGLKDHQGNEIEDR
                     LYTVKDFDYNIVLNDRTRLVAERICEFLRKTDRLQKTIVFCANINHAERMVAELSRLN
                     ADMLKHNSKYVCQITGDQSGKGVDLEEFCDVANEGKDYPVIAVTSKLMTTGVDSKTCK
                     LVVLDANIQSMTEFKQIIGRGTRLRPDFGKEFFTILDFRGVTRLFADPAFDGEPVVIL
                     DVPENKPLVEQPLPKPSDKDIIKDPELKPYKIPVVVDFGTLKLRILDEKVQYLNEQGE
                     LVSEDIDLFSKREMQKEFGSYEQFQQQWTTSGEIFSKFYTDPKWLAALRQTRQFSHDV
                     EDFDVLSHISFGKKPLTKTERAEKVKQSGYVEQYSPENQQVLGLLLNEYVKSGNQDLT
                     KTEILKTPQFSRFGGLVSIIKNFGGKELYQKAVKGLEKMIYSE"
     gene            complement(5987..6880)
                     /gene="psd"
                     /locus_tag="PXD18_001639"
     CDS             complement(5987..6880)
                     /gene="psd"
                     /locus_tag="PXD18_001639"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251643.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDL6302057.1"
                     /translation="MQLKKYPVPTYFQRVKIALHYLLPQLAITRAAGWLAEQKWGVVT
                     HLIIKLFAKQYKVNLSEAKKTEPSDYATFNEFFIRELKENARPINQDPNTLCLPAEGK
                     VSESGEISDNRLLQAKGHHFTLETLLANDEEMAAKFKDGTFITTYLSPTDYHRVHMPC
                     DGTLRKMIYVPGELFSVNPFLAEHVPNLFARNERVICEFDTAFGPMLQILVGATVTAS
                     MSTVWAGVINPPRADEVVVWNYETEGEKAIKLQKGEEMGAFRLGSTVINLFPKGKVHL
                     NPALIAGMQTRMGEELGRIIN"
     gene            complement(7045..7383)
                     /locus_tag="PXD18_001640"
     CDS             complement(7045..7383)
                     /locus_tag="PXD18_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HDL6302058.1"
                     /translation="MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQI
                     TNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRTKNGNFKNIEQLAEVSGIGQATV
                     EKNRANIILE"
     gene            7676..8995
                     /locus_tag="PXD18_001641"
     CDS             7676..8995
                     /locus_tag="PXD18_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="opacity-associated protein A"
                     /protein_id="HDL6302059.1"
                     /translation="MTQNNFRKEPVFGESSVTSQDAEATKTDTAQAPYVSLRSTKAPG
                     HTFTPIMKRPDAKVEDHTADVFSAKQAKEFQFTPSSEATEAVEPDNTIHSVEESVSTA
                     SFNAVEAQENVEKEVVKPAPESFTTERIIPNAATAAAAATAAAAATKTKEIKAKMPPK
                     TRRLLLVALLALALLVLFFLLKPSTPETVEELQSQQGGSLPIEFRPVDEAEAKRAEEQ
                     ARAEQEAAEAAKAQEQAQAAQQESVTVAPAQTEQTMAKPSQDSQSQTQSQAVVEQPVA
                     VKPVENKPVVAQPAIKPKTENSVVFQPETTVKQQPKAPAKTEVKTERATLAAKETAKT
                     AAKPVEKAPTKTEAVKAAPAAESANAVATKTMTVPKGVSLMQVFRDNNLNISDVNAMS
                     KVNNVVSNLKVGERVTVRLDKNNRVVEMSIGSGGKFTRQANGSYTFK"
     gene            9113..9475
                     /locus_tag="PXD18_001642"
     CDS             9113..9475
                     /locus_tag="PXD18_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HDL6302060.1"
                     /translation="MLVACSTVVTPVEQIHQVQKEKESVKKVTKLIAQAPKVSLYRCE
                     NDKKVEVERQGRTKKALKKEIVTVSYQGTTHQLSPSVTRDGKKYTNIRWTWHETRSGK
                     AFLYNNTKKTLAANCIKQ"
     gene            9586..10623
                     /gene="waaF"
                     /locus_tag="PXD18_001643"
     CDS             9586..10623
                     /gene="waaF"
                     /locus_tag="PXD18_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HDL6302061.1"
                     /translation="MNILVIGPSWVGDMMMSHALYQQLKIQYPNCQIDVMAPDWCCPL
                     LARMPEVRNAISMPIGHGSFRLCERYRLGKSLRNQYDMAIVLPNSLKSAFIPLFAKIA
                     RRRGWKGESRYFFLNDLRSNKNDYPMMVQRYVALAFEKATVPTAQQLPIAYPYLTTDS
                     EQIEQTKAKFEKQLAYAENRPAIGFCPGAEFGPAKRWPHYHYAILAKMLIEQGYSVRL
                     FGSKKDEAAGEQIRLALPENLQRYCLNLAGQTDLNQAVDLIADCNAVVSNDSGLMHIA
                     AALNKPLVALYGPTSPQYTPPLSQNAEIMRLIEGGLIKIRKGEGAEGYHQSLIDIQPE
                     MVMDKLAELLV"
     gene            10690..11649
                     /gene="rfaC"
                     /locus_tag="PXD18_001644"
     CDS             10690..11649
                     /gene="rfaC"
                     /locus_tag="PXD18_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase RfaC"
                     /protein_id="HDL6302062.1"
                     /translation="MKILIVKTSSMGDVLHTLPAITDMQNAIPDLKVDWVVEENFTEI
                     PAWHSAVNKVIPVAIRRWRKNLCQRQTWVEWQQFLKQLKSEQYDAVIDAQGLIKSAVL
                     VTRQAKGKKFGYDKNSAREGLSSLFYDETFNIPYQQHAVERIRKLCAKSLGYALPTER
                     GDYCIAQHFAKNPQKTTAYIMLIHATTRADKHWQEAYWAELIQALDKHNLAVRLPWGN
                     QAEKERAERLASVANNAKVLPKMSLTDIATQLAGAAAVVSVDTGLSHLAAALDKPNVI
                     LYGATDPKLIGAYGQNQFYLKADKMENITSSQVLEKLLPLINK"
     gene            11770..12144
                     /gene="rpsL"
                     /locus_tag="PXD18_001645"
     CDS             11770..12144
                     /gene="rpsL"
                     /locus_tag="PXD18_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HDL6302063.1"
                     /translation="MATINQLVRKPRVKKVVKSNVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCRIRLTNGFEVTSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGAL
                     DCAGVKDRKQGRSKYGVKRPKA"
     gene            12275..12745
                     /gene="rpsG"
                     /locus_tag="PXD18_001646"
     CDS             12275..12745
                     /gene="rpsG"
                     /locus_tag="PXD18_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HDL6302064.1"
                     /translation="MPRRRSIEPRKILPDPKFGSELLAKFINVLMVDGKKSTAEKIVY
                     GALETLTQRSGKEALEAFEIALENVRPTVEVKSRRVGGSTYQVPVEVRPTRRNALAMR
                     WIVEAARKRGDKSMALRLANELSDAADNKGSAVKKREDVHRMAEANKAFAHFRW"
     gene            12847..14949
                     /gene="fusA"
                     /locus_tag="PXD18_001647"
     CDS             12847..14949
                     /gene="fusA"
                     /locus_tag="PXD18_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020455498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDL6302065.1"
                     /translation="MARTTPISLYRNIGISAHIDAGKTTTTERILFYTGVSHKIGEVH
                     DGAATMDWMEQEQERGITITSAATTAFWSGMSQQYPQHRINVIDTPGHVDFTIEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRTGANFLRVVEQIKT
                     RLGGNSVALQLPIGAEDSFKGVVDLIKMKAINWNEADQGMTFTYEDIPADMLEACEEH
                     RAMLVEAAAEASEELMEKFFSGEELTEDEIKAALRQRVLAGEVIPVCCGSAFKNKGVQ
                     AMLDAVIDYLPAPTDIPAIKGINEDETEGERHASDDEPFASLAFKIATDPFVGNLTFF
                     RVYSGVINSGDTVYNSVKQKRERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVGTG
                     DTLCAIDAPIILERMEFPEPVISVAVEPKTKADQEKMGLALGRLAQEDPSFRVHTDEE
                     SGETIISGMGELHLDIIVDRMKREFKVEANIGKPQVSYRETIRTRVNDVEGKHAKQSG
                     GRGQYGHVVIDLYPLDAEGPGYEFVNEIKGGVIPGEYIPAVDKGIQEQLKSGPLAGYP
                     VVDLGVRLHFGSYHDVDSSELAFKLAASLAFKAAFAKASPVLLEPIMKVEVETPPDYV
                     GDVIGDLSRRRAMVNGQEANEFVVKINAEVPLSEMFGYATDLRSQTQGRASYSMEPLK
                     YAEAPKNVADAIIEARRK"
BASE COUNT         4441 a         2923 c         3158 g         4486 t
ORIGIN      
        1 gcagtttttt tgtttttttt gatctttcct tctgcaatca agcggtcttt ttctgcttgg
       61 attttgcaaa ggagttcgct tgccggttca tcatttggat cttgtggaac gagcttgcct
      121 tggattgcta gttgtaggat tgcgtttttt agctgttggg ctttcatttt ttattctcaa
      181 taatcggttg ttatttctta aagtatcttt gattacggtg ttttgggttt tctgggaatt
      241 gcatttcgat cacaccaagc gttagtgcag gttttaaata ctgcatacgg aaatgcttat
      301 catcttttaa cctgagtttt ttcataattt ctttgctctt catcggctca agcaacactg
      361 aaagtaagcg atttacttcg ggggtaattt gtttgctttg ttctggggta attgtttgac
      421 ttgcttcact ttgcttttct tcgggggggc gcccttactc tcactagctt tatcaagttg
      481 gtcgaaaggt ggattaaaat aatcatcttg tgatttctct gtgattatcc attctaaatt
      541 cactagggta tagagttgtt ttctcggact ccccgaactg gttagtaagc ctttttcttt
      601 cagtcgtgct agtgccaaag taatatttct gcgtggatat tggggcagtt tttgtgctaa
      661 ttctgcaaac attgctttac cttgattgaa ggcgataaag agtaagcaat ctttttgaat
      721 aggctgtaac tcagagaaat tttcgccaaa gcaagcggta aatttttcct caaaatctgc
      781 aatcatacct gattgaaaag ttaaggtgag tttagtgtaa tcaatttcac tttctaaaag
      841 cggtgaattg aaatttcggc tttgccaata tgaataaata tcccgaacgc cttgtccttg
      901 tcgctcacat agccctaaac ggtggaataa gttatgaata atagaattac ggcattccga
      961 tctttgccct gcaatagccg tgggaatatc aaccaacatt actcctgcat tttcaaaaat
     1021 cagtttgtta tctttggttt taatgacttt tagatggcga acattgttaa agtaatctgc
     1081 gtgagtaatt gcattgatta gagcttcccg tagcccgtca gtaatttcat tttcctcagt
     1141 acgggttaaa ttatctaatt tgaaatgttt atctttacca agctcttgaa taagtggcac
     1201 aattttcaag taaaattcaa agagattgcc ttcttcaaga tcaaaatcgg taatccgtaa
     1261 tgtatagcgt tttacatcac cagcttcttc gtaatattca aaaaagaagt ggggaaatat
     1321 gcttgtaatg gcatagtgct taccaaacat caataagcct gcattggtaa tgccctcgct
     1381 attctgtgct aaatcttttt tataagcccc aatttcttgc agcaatttct catcggataa
     1441 cgtaagtaat tttgatgtgc tgttatgggc tttcagcaga tttctgtatt tatccaatgt
     1501 gcttaaactg atatcatcaa tagaagcata aggcacaatt ctcccatcag catctttttg
     1561 gctatagctt gaaatgaaag aacgcagttc agaggaggtg agtttatgat cgcctgaatt
     1621 taaacgaaca taagaaagtc gataatcacc atttaaatgg ataggacggt ctaaaatatc
     1681 agctgctttc acataaattg caatcacgct tttattttca acttgaaaga ttttcacatc
     1741 attatccttt aataaggatt tactgacttt ttcactacga gattgggaaa ataattcatc
     1801 aatgacttta tcaggatcat taacaccaga aattagcagt tcaggaaaat gtccttgttc
     1861 attttccttt attcctaata aaataaagcc accattgctg tttgcaaaag ccgaataagt
     1921 atgccaaaga tcttttggca cactattttt tgcctcttta tattcaattt ctgccttttc
     1981 tcggataaat tgctgatgtg caatcatttt ttcgatatgt tcccaagtca gcattttatg
     2041 ctcctattac agtttaatgc ctaaaatatc ggtaatttct gctagaatct tatcaatatc
     2101 agcattgtaa gcggtgcgtt ttcgctgata atctgcaatt agttcatcag gcggaaggat
     2161 ttcctcttct tcgtgaggaa agccacataa atcgaggttg tattgacggt cggacatttc
     2221 ctttaatgta aaacttttcg ctttgtcaaa cccttcgact tcaatcactt ggcgatttcc
     2281 ccaccattca acaacttcgt tgaaatgttc caatttcatc ggtttagttt tggagaaatt
     2341 tttataaccc tgtggcatat caaggcgata aacccaagtt tcacgggttg gctcggtttt
     2401 atcaaaaaac agaatattag tcgtaatcga ggtataaggg gcaaagacac tatgcggtaa
     2461 gcggataatc gtatgcagat taaactcttc taatagcttt ttcttaatcg caactttggc
     2521 attatctgtg ccgaacaaaa atccgtcagg cagcaccacc gcagcccgtc cattctgttt
     2581 taggcggtac ataattaccg acataaacag atcagcggtt tcactgctct gtaaagccgt
     2641 agggaaattc tttttaattt gctcaatttc tgaacctccg taaggtggat tcatcaaaat
     2701 cacatcaaat ttatcatttt cggtgtaatc tttgaccgat ttttctagag cattatcgtg
     2761 atgtacattc ggattatcaa tatcgtgcaa caataaattg gtaatacaaa gcaggtgagg
     2821 aagggctttt ttctcaatgc catacacaga attattgaat aaagtgcggt cagaaagggt
     2881 ttgaatttga ctttccaata cctttaacgc cgaagttaaa aaaccacccg tcccacaggc
     2941 aaaatcggca atgcgttcgc caagtttcgg tttgattgct tgtaccataa aatcggttac
     3001 agcgcgaggg gtataaaatt cccctgcatt acctgcactt tgtaaacttt tgaggatatt
     3061 ttcataaata tcgccaaagg cgtgtcgttc ttggtaatgg gcaaaatcaa tttcatcaat
     3121 gatattgata acctgacgta ataacacccc atttttcata tagttgttat tatcttcaaa
     3181 agcagcacgg ataatccgtt ggttcatcgg cgtatcggct gaaataggca gattttttaa
     3241 agtcgggaaa agttcgttat tgacgaaaga gagtaattca tcaccagtca tcgctttgcc
     3301 gtctttttta tcttccgccc aattttgcca gcgtaaaaaa ttcggcaaaa ttgagtgata
     3361 ttcatcgttt tccagttccc actcttgttc tttagcatcg taaattttca agaataagat
     3421 ccagacgatc tgttcaatgc gttgggcatc accgttaatc cctgcatcgt tacgcattac
     3481 atcttgcagg cgttttacta tgttgttgag gctcattgtg atccttgttt atctgtaaaa
     3541 ttttgttgta aaataaccgc ttgttattcc gaataaatca tcttttctaa gccttttacc
     3601 gctttctggt agagttcttt accgccgaaa tttttaataa tagacactag acctccaaaa
     3661 cggctgaatt gcggtgtctt taaaatttcg gttttagtca gatcttgatt gccggatttg
     3721 acatattcat taagcagcaa ccctaaaact tgctggtttt cgggcgaata ctgctccaca
     3781 tagccacttt gtttcacttt ttctgctcgt tcggttttag tcagtggttt tttgccaaag
     3841 gagatgtggc ttaatacatc aaagtcttca acatcgtggc tgaattggcg tgtttggcga
     3901 agggctgcca gccattttgg atcggtgtaa aatttcgaga aaatttcacc gcttgttgtc
     3961 cattgctgtt ggaactgttc gtaactgccg aactcttttt gcatttcccg ttttgagaac
     4021 agatcaatat cttcagaaac cagctcgccc tgctcattca gatattggac tttctcgtct
     4081 aaaatgcgta atttgagtgt gccgaaatcg acaactaccg ggattttata tggctttagc
     4141 tcggggtctt taatgatgtc cttatcactg ggtttaggaa gcggttgttc gacaagtggc
     4201 ttattttccg gtacatctaa aatcaccacc ggctcaccat caaatgccgg atcagcaaac
     4261 aggcgagtaa cgcctcgaaa atctaaaatg gtgaaaaatt ctttgccgaa atcagggcga
     4321 agacgagtgc ctcgtccgat aatttgttta aattccgtca ttgattgaat gtttgcatca
     4381 agtacaacca gcttacaggt tttgctatct acacctgttg tcatcaattt agaggttacg
     4441 gcaatcacag ggtaatcttt cccttcattt gctacatcac aaaattcttc taaatcaacg
     4501 cctttgcctg attggtcgcc tgtaatttgg cagacatatt tggaattgtg tttcaacata
     4561 tcggcattga ggcgtgaaag ctctgccacc attcgctctg catggttgat gttggcacag
     4621 aagactattg ttttctgcaa gcggtcggtt ttgcgtaaaa attcgcaaat tctctccgca
     4681 accaagcggg tgcgatcatt tagcacaatg ttgtaatcga aatctttgac tgtatagagg
     4741 cgatcttcaa tctcattacc ttgatgatct tttaaacctt tggttggtcg ccagcctttt
     4801 aaatcacagt ccagatcaac acgaatcact cgataagggg caagaaagcc gtcttcaata
     4861 ccttgtttga ggctataggt ataaatcggc tcgccaaaat aggtaatgtt gctggcatca
     4921 tcggtttctt tgggggttgc agtcataccg atatgggtgg cgtccttgaa atacttcaaa
     4981 atagcacgcc agtcagaatc ttcttttgct gaaccacgat gacattcatc gatcacaata
     5041 agatcaaaga aagagggttg gaactgctta aacagttcgt tatcggtttc accgtcaagc
     5101 tgttgataaa gtgcaagata gacttcataa gcactgtcga gctttttatt gctgactttc
     5161 accattttgt ctttaaacgg tttgaagtct tgcatcattg gctgatcgac tagtacattg
     5221 cgatcggcaa gaaataaaat tttctttttc gcaccactgg tttttaaacg atggataatt
     5281 tggaaagccg tataggtttt acccgtgcct gttgccatta ccaataaaat cctctgctga
     5341 ccttttgcta cagcttcaac agtacggtta atcgcaattt cttggtagta acgaggctct
     5401 ttaaaggtgt cagtgctact ggtgtaataa ggctgttgaa taattttcag ctcttcggtg
     5461 gtatattgtt tcgcccaacg ttggtggagt tcgtcgggag taggaaatgc tgacatcgga
     5521 agggttcgtt gtacgccagt gataaaatcg tgttccacaa actcatcacc atttgagcta
     5581 tatgcaaaag ggacatcaag caatcgagcg tatgtcattg cttgctgtaa gccgtgtcgg
     5641 gaagagtgat ggttatcttt ggcctcgacc acggcaattt tttgatttgc ggaagtatag
     5701 agcagataat caacccgttt tgcttcgatg cgtttagttt gcgtcgtttt tggatcaaca
     5761 actacttgcc catctgtaaa tcgtttattg gttttaaatg tgtactcttc gccaatttgt
     5821 ctatccgacc atcctgcatt tctaattgca ggagagatta atcgagagcg aatttcttgc
     5881 tcgttcatct gctttaattc ttgaagtgtg tacatatttt tccttccgat aagagtttct
     5941 tatcggaaga ttatagcaaa cagtttaggt aaaattaact caggatttaa ttgataattc
     6001 tacccaactc ttcccccatt cgggtttgca ttcctgcaat aagtgcaggg ttgagatgta
     6061 ctttaccttt cgggaagagg ttaattacgg ttgagcctaa acggaaagct cccatttctt
     6121 cgcctttttg gagtttgatg gctttttcgc cttcggtttc gtaattccaa actaccactt
     6181 catcagcgcg aggcggatta attacgccag cccaaaccgt actcatactt gcggtaaccg
     6241 ttgcaccgac caaaatctgt agcattggtc cgaatgcggt gtcaaattca caaatcacac
     6301 gctcattgcg agcgaataag tttggaacgt gttcggctaa aaacggattg acggagaaca
     6361 attcgcccgg cacataaatc attttacgca atgttccatc gcacggcata tgtacacgat
     6421 ggtaatcagt tggcgataag taggtggtaa taaatgtgcc gtctttaaat tttgccgcca
     6481 tttcttcatc atttgccaat aaggtttcta gcgtaaaatg atgccctttt gcttgtaata
     6541 aacggttatc cgaaatttcg cctgattcgc tgactttacc ttctgccggt aagcaaagtg
     6601 tatttggatc ttgattaatc gggcgtgcgt tttcttttaa ttcacggata aaaaattcat
     6661 taaaagtagc ataatctgac ggctcggttt ttttagcttc agataaattg actttatact
     6721 gttttgcaaa cagtttgatg ataaggtgag taactacgcc ccatttttgc tctgctaacc
     6781 aacctgccgc acgggtaatt gccagttgtg gcagtaaata gtgcagagcg attttcacac
     6841 gttggaaata ggttggaact ggatattttt ttaattgcat tgcgttttcc ttttatttaa
     6901 aaacgagaat ttgcgtttaa ttgggggcga agtatagcaa atacaatgca aaatagataa
     6961 aaaatcttta aggtgttgaa gtggctacaa agaaaaaaac agataggggc tttgtaggaa
     7021 ttccacttca acaatttggt tgtcttattc taaaataata ttggctcgat ttttttctac
     7081 cgttgcttgc ccaattccgg agacttcagc aagttgctca atgtttttaa aattgccgtt
     7141 tttagtacgg taatcgacaa tcgcttgagc ttttttctgc ccaattccca ctagcttgtc
     7201 ttgcaattca gcagcactag cagtattgat atttaccgca ttagcgttgg tgatttgtgt
     7261 ttgctgtacg ggttgagtga ctgcattttg ttcaacaggc attgtagttg gcggtgtttg
     7321 ggcaaaagcc attgcattta agccaaacaa gaatgttaga ccaagttgtt tgattttctt
     7381 cataggattt ccttattagt tgttgaaagg tcgaaaggaa gattaagagg gaataaaata
     7441 gaactcaacc ggcaaaaata aatttttcga cacagatcga aaaaatagaa aatggctaaa
     7501 cttctagacg tgcatttggt ctgaaattca atgaaagtaa atagatttgc aaaaaattag
     7561 gcaaaaatga ccgctagttg cgtaaattta gttaaataaa ttcaaatagc ggctgaattg
     7621 ctttagaata tcgccatttt tatactcatt aacaacgcta ttatttggaa ttaatatgac
     7681 acaaaataat tttcgcaaag aaccggtttt tggtgaatct tcggttacct ctcaagacgc
     7741 tgaagcaacc aaaacagata cagctcaagc cccttatgtt tcgttgcgtt caaccaaagc
     7801 accggggcat acgtttaccc caattatgaa aagacctgat gctaaagtag aagatcatac
     7861 ggctgatgtc ttttcggcta agcaggcaaa agaattccaa tttactccaa gttcagaagc
     7921 tacagaagca gtagagccgg ataataccat tcattcggtt gaagaaagtg tatcaaccgc
     7981 atcttttaac gcggttgaag cacaagaaaa tgtggaaaaa gaagtggtta aacctgcacc
     8041 cgagagtttc actactgagc gtattattcc aaatgcggca acagctgccg cagcagccac
     8101 tgcggcagct gcagccacta aaaccaaaga gattaaagct aaaatgccac ctaaaacccg
     8161 ccgtttatta ttagtggcat tgttggcgtt agcattattg gtactgtttt tcttgttaaa
     8221 accaagtacg ccggaaactg tcgaagagct acaatctcag caaggtggta gcttgccgat
     8281 tgaattccga ccggttgatg aagctgaagc gaaacgtgcg gaagaacaag ctcgtgcaga
     8341 acaagaagcc gctgaagctg caaaagctca agaacaagct caagccgctc aacaagagtc
     8401 tgtaacagtt gctccagccc aaaccgagca aacaatggct aaaccgtcac aagatagcca
     8461 gtcgcaaaca caatcacaag cagtagttga gcaacctgtt gcggtgaaac cggtggaaaa
     8521 taaaccggtt gttgcacaac cggcgattaa gcctaaaacg gaaaatagcg tggtgttcca
     8581 acctgaaaca acggtaaaac aacagcctaa agcccctgct aaaactgaag tgaaaaccga
     8641 acgtgctaca ctggcagcaa aagaaacggc aaaaacagca gctaaaccag ttgagaaagc
     8701 tccgacaaaa actgaagcgg taaaagcagc accggctgcc gagtcggcaa atgcggtagc
     8761 aaccaaaaca atgactgtgc caaaaggtgt atcactaatg caagtgttcc gtgataacaa
     8821 tttaaatatc tcagacgtta atgcgatgag caaagtcaat aacgtggtga gtaatttaaa
     8881 agtaggcgag cgagtaaccg ttcgtttaga taaaaataac cgtgtggttg aaatgagcat
     8941 tggctcaggc ggcaaattta cccgtcaagc aaacggtagc tatactttta aataaataaa
     9001 atgaagaaaa agagcaacgc tacaaacgtt gctcttttat ttaaaaagga gataaaggat
     9061 gaatttattt tgcccctctt acaaacttat ctacttaacg ctaagctcag cgatgttagt
     9121 tgcttgtagt acagtggtta cccctgttga gcaaattcat caagtacaaa aggaaaaaga
     9181 gtcagtaaag aaagtgacta aactgatagc acaagcacct aaagtgagtt tatatcgttg
     9241 tgagaatgat aagaaggttg aagttgaacg ccagggacga acaaaaaaag cgttaaaaaa
     9301 ggaaatagtc acagtgagtt atcaagggac aacgcatcag ctttcacctt ctgtaacgag
     9361 agatggtaaa aaatacacta atatccgttg gacttggcat gaaacccgta gtggtaaagc
     9421 atttttgtat aacaacacta aaaaaacgtt agcggcaaat tgcataaagc agtaacaagc
     9481 ggacacaaaa agtatcgctt tttgaacgtt ggctttgcca acggcagcga agctgtgaac
     9541 aatccttaca aggattgtga ataaattttt aagagaattt tgcaaatgaa tattttagtt
     9601 ataggaccgt cttgggtggg tgatatgatg atgtcgcacg cactttatca acagcttaaa
     9661 atacagtatc cgaattgcca aattgatgta atggcacccg attggtgttg tccgctttta
     9721 gcccgtatgc ctgaggtgcg taatgcgatt tcaatgccga ttggacacgg ttcatttcgt
     9781 ttgtgtgaac gctaccgact cggaaaatcc ctgagaaatc aatatgatat ggcgattgta
     9841 ttgcctaatt cattaaagtc tgcctttatt ccactgtttg cgaaaattgc gagacgtcgt
     9901 ggttggaaag gggaaagtag atattttttc ttaaatgatc ttcgcagtaa taaaaacgac
     9961 tacccaatga tggtgcaacg ctatgtagcc ttggcgtttg aaaaggctac tgttccaacc
    10021 gcacaacagt tgccgattgc ttatccatac ctcacaactg atagcgaaca aattgagcag
    10081 accaaagcga aatttgaaaa acagttggct tatgcggaaa accgtcctgc catcggcttt
    10141 tgtccagggg ctgaatttgg accggcaaaa cgttggccgc attatcatta tgcaatattg
    10201 gcaaaaatgt tgattgagca aggctattcg gtacggttat ttggctcgaa aaaagatgaa
    10261 gccgccggtg agcaaattcg cttggcatta cctgaaaatt tacaacgcta ttgcctgaat
    10321 ttagccgggc aaaccgattt aaaccaagcg gtagatttga ttgcagattg taatgcagtc
    10381 gtgagcaatg actccggctt aatgcacatt gccgcagcac taaataaacc gctggtcgcc
    10441 ttatatggac cgaccagccc acaatatacg ccgccgttat cccaaaatgc cgagatcatg
    10501 cgcttaattg aaggcggttt gattaaaatc cgcaaaggcg aaggggcaga gggctatcac
    10561 caaagtttaa ttgatattca gcctgaaatg gtgatggaca aattagctga actgttagtt
    10621 taaatggata acaagcggtt gaatttgcca attttttgca aaaaaagacc gcttgtttgt
    10681 ttataaaaga tgaaaatttt aatcgttaaa acctcatcaa tgggagatgt attacatacg
    10741 cttccagcca taaccgatat gcaaaatgct attcccgatt taaaagtaga ttgggtggtg
    10801 gaggagaatt ttaccgaaat tcctgcgtgg cattcagcgg taaataaagt aattccggtg
    10861 gctattcgcc gctggcggaa aaacctttgc caaagacaga cttgggtaga atggcagcag
    10921 tttttaaaac agctaaaaag tgagcagtat gatgcggtaa ttgatgctca agggctgatt
    10981 aaaagtgcgg tgttagtaac tcgccaagcc aaaggcaaaa aatttggcta tgataaaaac
    11041 tctgcccgag aagggttaag tagtctgttt tacgatgaaa cgtttaatat cccctaccaa
    11101 caacacgctg tagaacgcat cagaaaatta tgtgcaaaat cattaggtta tgctttgcca
    11161 accgaacggg gcgattattg cattgcacaa cattttgcaa aaaatcctca aaaaacgacc
    11221 gcttacatta tgctgattca cgccactacc cgagcggata aacattggca agaagcctat
    11281 tgggcggagt tgattcaagc gttggataag cacaatctgg cagtcagatt gccttgggga
    11341 aaccaagccg aaaaagaacg ggcggagcgt ttagcgagtg tggcgaataa tgctaaggta
    11401 ttgccaaaaa tgagcttaac cgatattgct actcaacttg cgggagcagc ggcagtggtg
    11461 tcggtggata ccggcttgag ccatttggcg gctgcgttag ataagccaaa tgtgatttta
    11521 tatggggcaa ccgatccaaa acttatcggg gcttacgggc aaaatcagtt ttatctaaaa
    11581 gcagataaaa tggaaaatat tacctcttca caagtgctag aaaaattact tccattgatt
    11641 aacaaatgat cattgttgtt ctcttactgt gcttgacttt tatccacgtt caatttagaa
    11701 ttcaccgtcc tttcgtgtga aaggatgttt ttaattttat ttttaataat tttaactgga
    11761 gcttttttaa tggcaactat caaccagcta gtacgcaaac cgcgtgtgaa aaaggttgta
    11821 aaaagtaacg ttcctgcatt agaggcttgc ccgcagaaac gtggcgtgtg tactcgtgta
    11881 tacactacta cacctaaaaa accgaactca gcattacgta aagtatgtcg tattcgttta
    11941 acaaatggct ttgaagtaac ttcatacatc ggtggtgaag gtcacaacct tcaagaacac
    12001 agtgttgtat taatccgtgg tggtcgtgtt aaagacttac cgggtgttcg ttaccatact
    12061 gtacgtggtg cacttgactg tgcaggcgtt aaagatcgta aacaaggtcg ttctaaatac
    12121 ggcgttaaac gtcctaaagc ttaatggttc tccgttgagt aaggccaaac gtctaaattt
    12181 taatatttaa accataaact ccagtcaaga tgccttaagg cagattagat gagttttgga
    12241 tatcctgaag atttaatata cggagaaatt tccaatgcca cgtcgtcgta gtattgaacc
    12301 acgcaaaatt cttccagatc cgaagttcgg ttcagaatta cttgcaaaat ttattaacgt
    12361 gttaatggta gatggtaaaa aatctactgc agaaaaaatc gtttacggtg cattagaaac
    12421 tttaacacaa cgttctggta aagaagcgtt agaagctttc gaaatcgcat tagaaaacgt
    12481 acgtccaact gttgaggtta aatctcgccg tgtgggtggt tctacttacc aagttcctgt
    12541 agaagttcgc ccaacccgtc gtaatgcttt agcaatgcgt tggatcgtag aagccgctcg
    12601 taaacgtggt gacaaatcaa tggcattacg tttagctaac gaattatcag atgcagcaga
    12661 caacaaaggt tcagcagtga agaaacgtga agacgttcac cgtatggctg aagctaacaa
    12721 agcgtttgct cacttccgtt ggtaatcgtt taagcaaact tatcaaaggc ttcatctcag
    12781 tttgcggtga agccttaccc ttattaagaa ttttaattta aaccccaaac aaggtaataa
    12841 ataaaaatgg ctcgtacaac ccctatttca ctttaccgta acatcggtat cagtgcgcac
    12901 atcgatgcgg gtaaaacaac tactacagag cgtatcttgt tctatacagg tgtaagtcac
    12961 aaaatcggtg aagttcacga tggtgctgca acaatggact ggatggaaca agaacaagag
    13021 cgtggtatca cgatcacatc tgctgcaaca acagcattct ggtctggtat gtcacaacaa
    13081 tatccacaac accgtatcaa cgttattgat actccgggac acgttgactt tactatcgaa
    13141 gtagaacgtt caatgcgtgt acttgatggt gcggtgatgg tttattgtgc agttggtggt
    13201 gttcaaccac aatctgaaac tgtatggcgt caagctaaca aatataaagt gccacgtatc
    13261 gcgttcgtaa acaaaatgga ccgtacaggt gcaaacttct tacgtgttgt tgagcaaatc
    13321 aaaacgcgtt taggtggtaa ctcagttgca ttacaacttc caatcggtgc agaagacagc
    13381 ttcaaaggtg ttgttgattt aatcaaaatg aaagcaatca actggaacga agctgatcaa
    13441 ggtatgacct tcacttatga agatattccg gcagatatgc ttgaagcttg tgaagaacac
    13501 cgtgcaatgc ttgttgaagc agcagctgaa gcttctgaag aattaatgga aaaattcttc
    13561 tctggtgaag aattaactga agatgaaatc aaagcagcat tacgtcaacg tgtattagca
    13621 ggtgaagtaa tccctgtttg ctgtggttct gcatttaaaa acaaaggtgt acaagcaatg
    13681 cttgatgcgg taatcgatta cttaccggca ccaactgata ttcctgcaat taaaggtatc
    13741 aatgaagatg aaactgaagg tgagcgtcac gcaagcgacg atgagccatt tgcttcatta
    13801 gcattcaaaa ttgcaacaga cccattcgta ggtaacttaa ccttcttccg tgtttactct
    13861 ggtgtaatta actctggtga tacagtttac aactcagtaa aacaaaaacg tgaacgtttt
    13921 ggtcgtatcg tacagatgca cgcaaacaaa cgtgaagaga tcaaagaagt tcgtgcgggc
    13981 gatatcgctg cagcaatcgg tttaaaagat gttggtacag gtgacacatt atgtgcaatc
    14041 gatgcaccaa tcattcttga gcgtatggaa ttccctgagc cggtaatctc tgttgcggtt
    14101 gaaccaaaaa ccaaagctga ccaagagaaa atgggcttag ctttaggtcg tttagcacaa
    14161 gaagaccctt cattccgtgt tcacacagat gaagaatctg gtgaaacgat catttcaggt
    14221 atgggtgagt tacacttaga catcatcgtt gaccgtatga aacgtgagtt taaagtggaa
    14281 gcaaatatcg gtaaaccaca agtatcttac cgtgaaacta tccgtactcg tgttaatgat
    14341 gttgaaggta aacacgcaaa acaatctggt ggtcgtggtc aatatggtca cgttgtgatc
    14401 gacttatacc cattagatgc tgaaggtccg ggttatgagt ttgtaaacga gatcaaaggt
    14461 ggtgtaatcc ctggtgaata cattcctgcg gttgataaag gtatccaaga acagcttaaa
    14521 tctggtccgt tagcaggtta cccggtagta gatttaggtg tgcgtttaca cttcggttca
    14581 taccacgatg ttgactcatc tgaacttgcg tttaaacttg ctgcatcatt agcatttaaa
    14641 gcggcgttcg caaaagcaag cccggtatta cttgagccaa tcatgaaagt ggaagttgaa
    14701 actccaccgg attacgtggg tgatgtaatc ggtgacttaa gccgtcgtcg tgcaatggtt
    14761 aacggtcaag aagcgaacga gttcgttgtt aagatcaatg ctgaagttcc actttcagaa
    14821 atgtttggtt atgcaacaga cttacgttca caaactcaag gtcgtgcatc atactctatg
    14881 gaacctttaa aatatgctga agcaccgaaa aacgttgctg atgcaattat tgaagctcgt
    14941 agaaaataat ttgtttaacc tgagccatag caatagggct atggctcatt ttttaggaag
    15001 atattaaa
//
LOCUS       DANLXD010000065        14510 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.065, whole genome shotgun sequence.
ACCESSION   DANLXD010000065 DANLXD010000000
VERSION     DANLXD010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14510)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14510)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14510
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.065"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            7..1515
                     /locus_tag="PXD18_001648"
     CDS             7..1515
                     /locus_tag="PXD18_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDL6302066.1"
                     /translation="MSNQSSNAPQRETFSGRGAFIMAAIGSAVGLGNIWRFPYTTYEN
                     GGGAFILPYIIALLTAGLPLLFLDYSIGHKYRGGAPLAFRRFSSKFETFGWWQVLINV
                     IIGIYYAVVLGWAASYTYFSFSGAWGDKPVDFFIGEFLKMGDITQGVSFEFVGMVTGP
                     LIAVWLIAIAVLAMGIKKGISAASNLLMPQLIVMFLVLVGYSLTLPGAAKGLDALFTP
                     NWEKLADPSVWIAAYGQIFFSLSICFGIMITYASYLKKETDLTGSGLVVGFANSGFEL
                     LAGIGVFAALGFMATAAGQEVNEVAKGGIGLAFFAFPTIINQAPMGALVGVLFFGSLT
                     FAALTSFISVIEVIISAVQDKLNSGRVKATLLVGIPMMVVSVLLFGTTTGLPMLDVMD
                     KFVNQFGIVAVAFVSLIAIVTSEKLSTLEKHLNEVSSFKVGFIWRLCIVITSGVLAFM
                     LFSEIAKVYREGYEGYPSWFVNTFGWGMAIGLVVVAYLLSKMAWKNEPKGDE"
     gene            1515..1613
                     /locus_tag="PXD18_001649"
     CDS             1515..1613
                     /locus_tag="PXD18_001649"
                     /inference="COORDINATES: protein motif:HMM:NF028261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HDL6302067.1"
                     /translation="MSSAAIITMVVAMTIIWGGLLFAIKRLPKEEQ"
     gene            complement(1661..1924)
                     /locus_tag="PXD18_001650"
     CDS             complement(1661..1924)
                     /locus_tag="PXD18_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrxA family glutaredoxin"
                     /protein_id="HDL6302068.1"
                     /translation="MFVEIYGRLSCPYCVRAKTLAEKMKQELSDFDFKFIDMIAENIS
                     KQDLEPRVGKPVATVPQIFVDNNHVGGCTDFQAFVEEKFGITV"
     gene            2084..3418
                     /gene="srmB"
                     /locus_tag="PXD18_001651"
     CDS             2084..3418
                     /gene="srmB"
                     /locus_tag="PXD18_001651"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase SrmB"
                     /protein_id="HDL6302069.1"
                     /translation="MTQLMTFEELDLSPQLLKALAHKGYNRPTAIQQATIPAALEGRD
                     LLGSAPTGTGKTAAFLLPAIQHLLDYPRRKPGAPRILILTPTRELAMQVAEQAQALAK
                     FTQLSIATITGGVAYQNHGEVFNKNQDIVVATPGRLMQYIKEENFDCRAVEVLIFDEA
                     DRMLQMGFGQDAEKIAAETRWRKHTWLFSATLEGELLEDFAERLLNDPIKVDAEPSRR
                     ERKKIQQWYYHADNVEHKTKLLARIISEFSVERAIVFVRRREDVRELSETLRKRGIRS
                     TYLEGEMAQTQRNQAINRLKEGVVNVLVATDVAARGIDIDDIDFVLNYDLPYSADTYL
                     HRIGRTARAGKKGSAISLVEAHDYKLLGKIKRYTEEVLKPRIIEGLEPRTKAPKDGEL
                     NVTSKKEKARIKKKKEAKKEAAKPKVKVRHKDTKNIGKRRKPSSESAAVKQA"
     gene            complement(3487..3780)
                     /locus_tag="PXD18_001652"
     CDS             complement(3487..3780)
                     /locus_tag="PXD18_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HDL6302070.1"
                     /translation="MSKTMQQKAAEAHNMCRLKGDSMLDNADRQIAFEAVYESEELAQ
                     QAVEFFAQKAKSVETEPCEIQSEITQIAEGFLMKMWITFSCQAEVILFQMAVR"
     gene            complement(3782..4444)
                     /locus_tag="PXD18_001653"
     CDS             complement(3782..4444)
                     /locus_tag="PXD18_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDL6302071.1"
                     /translation="MPFPDEISELKGYFDGTNPVSAYPAQGLNVPFYILGSSPESAYL
                     AAERGLPYAFASHFAPRFMDDAIRIYRSHFKPSDVLDKPYVILGVNAIVAETDEEATQ
                     LATTQTQFFLNVVTNAQQNLQPPLESDDKVWENFVKAEIVPHFGPVAFEQNALYRQEK
                     TVVRQMTECSLIGSPQSVEQQLKALKARVEIDEIMAVNYIFDEQKQHQSYTWLKQITD
                     KV"
     gene            complement(4428..4880)
                     /locus_tag="PXD18_001654"
     CDS             complement(4428..4880)
                     /locus_tag="PXD18_001654"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MsnO8 family LLM class oxidoreductase"
                     /protein_id="HDL6302072.1"
                     /translation="MVLQVLNSKAIQPFLYANSENKMTNLSILNLVPIREGQTAKQAV
                     DSMVKLAKHAENIGIERYWIAEHHNMKNLASSATQLLIQHALSHTEKLRVGSGGVMLP
                     NHSPYIVAEQYGTLETLYPNRVELGLGRAPGTDMRTASALRPEFAFPR"
     gene            complement(4900..5538)
                     /locus_tag="PXD18_001655"
     CDS             complement(4900..5538)
                     /locus_tag="PXD18_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDL6302073.1"
                     /translation="MKKFALKTVLVALSALFAFNATAVAADPTAGKEYIEVRKAPSAQ
                     KEVVEFFSFYCPHCYDFELNYKIPSQIKAKLPADSKLVQYHVNFLGRQSENLTRAWAL
                     AMALGAEDKVKTALFEAAQKDAFKSMDDIRAVFIANSISAEQFDSGINSFAVNGLVNK
                     QVQLAEDFQIRGVPAFFVNGQYQLNLEGFSDSSSTNDFIQRYIDAVVFLSKK"
     gene            complement(5582..5851)
                     /locus_tag="PXD18_001656"
     CDS             complement(5582..5851)
                     /locus_tag="PXD18_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihD family protein"
                     /protein_id="HDL6302074.1"
                     /translation="MKCKRLEELLELLGEHWRKNPDLHLIDILQQLSVEVSEPDNFHA
                     LRDEVLIYQLKMRNADKFEPIPGIKKDYEDDFKTALLRARGILND"
     gene            5943..7052
                     /gene="mobA"
                     /locus_tag="PXD18_001657"
     CDS             5943..7052
                     /gene="mobA"
                     /locus_tag="PXD18_001657"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HDL6302075.1"
                     /translation="MEEKISAVILAGGLARRMNGAEKGLQLLDQKPLISHLLARLSPQ
                     IEDIWLNINRSVEQYQQLYPELPYYQDSLPDFQGPLSGMLSGFEQIESDYLLFVPCDT
                     PFIPTQLLHKLHTALRINQAQIAYAHDGDRPHPTVALVHRSVAENLRAYLASGERRLL
                     WFFQTQKSVAVDFSAYKAAFRNFNCLEDLTAFNPYPIKTLAITGYSGTGKTTLLEKLI
                     PKLTACGIRVGLIKHSHHNVDIDKKGKDSYRLREAGANPTMVVCDERWALMTETKQAA
                     ETKQAVEFSQLIAKFDPETVDLVLVEGFKHETMPKIQLHRKEIEKPLPALDQWTIATA
                     TDYPLERENRLDINDVEQLADFIRQWLEASKEPAN"
     gene            complement(7107..11618)
                     /locus_tag="PXD18_001658"
     CDS             complement(7107..11618)
                     /locus_tag="PXD18_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL6302076.1"
                     /translation="MINKNFPLSYLASFVAFAVSLSATASVFRDDIDLQYYRDFAENK
                     GKFTVGASNIEIKDKSGNTLDALFPNVPMPDFSAANRNLGIATLVAPQYLVSVAHNTQ
                     YNTVEFGAPGTNADAHHYTYKVVDRNDYGIVEGGQHQDYQVPRLNKLVTEVAPATVTD
                     LGNNASAYQDSSRFTHFARLGSGRQIVKNTEHKDNQISTSYQYLTGGVHLPIAVHNSD
                     YWLDFRGNALNNSPYGALTAFGTRGDSGSGVYGYDQKTKRWLLLATYTFGTPANNYYN
                     RAGIIRQDYHDKQFAEDIAGTLTNAQQNAVFEWSAQGKDSSIGNKGKNLTVSLADRSI
                     KDNSASPLGYGGTPQLQLPQDNTGKTLNIEGQDSTIVLKTDIDQGAGALNFNANATVR
                     PENDQSWVGAGIVVAKGKQVNWQVKNPQGDRLSKLGEGTLHINGKGENLGDISVGQGT
                     VILTQQAGENGKKSAFNQVGIVSGRSTVVLNSADQVDPNKIYFGFRGGRLDLNGNNIA
                     FNRIQNSDDGARIVNNHLQKAATLTINGPKPPEATDLKWGTWKENSADIYEYINPHAN
                     NRTDYFTLKGNPNQYMPTNGASNAHWTFLSSNKDAAVKQVLAQKGLEHRYNSFNGFIG
                     ETDNTQHNGRLNVVYDPKASTPPATASEVTWGKGLVAGADIYLFTNPKTKIREYFALK
                     GDPKQPVPRGGLSSEHWEFLAADRNQAINKVLARKNAPIEQEKLNSIYTFSGGLNLNG
                     DLTVKGGKVLLSGRPTPHAYDAINKQDVVYADDWQNRQFKADNMQLNQYAQLYVGRNV
                     SNLQANLSANDHAQLHLGFINEQTPSCYYSEYTGKTSCDTQAVVSNEIFATLPTTQIN
                     GDVSLAEQSQLHIGKANLIGTIQAAATTSIRLANQASWTNTGDSRTGNLVAENGSTIN
                     LNEKFVTGEIPTRFNTLIIDGNFQGNAKINYLTDIAAGKGDHLQVNGLAEGTFTLALR
                     NSGKEAEVVSPLSLLTLTHQAQADKAKVSLENGYVDLGAYRYVLANRSNGYRLYNPLK
                     DAKDRNQSIATAKAELDHAIAEADKQKQEISRLNAEAEKERQAEKNAKQAAANAQSQL
                     SQANSELTRLQQYADYYRRYYPTYYRQIQGQITVAKQKVTQASAALTTAENNAKASAA
                     QIANVEQAVETAQNIAKQVEAKLATLRITAGNSEAILNAEALKLCQENGANCEHLQAH
                     ADTDSSNIQQSDWVSQYANTALSELSAQANSALQIGQDLDRQLFAKHDKFHVWSSIEH
                     QKTEHQSDLYRPYEQQTNLTQLGIELPLANGINAGVMLSRNHANAEFDEGVNGKSNLL
                     MASLYGKWHSENGTFVSLDGSYGKAKNRIDLFGENRFNRHIMAIGANLGHNFDLAGVQ
                     VQPAVGTRYYRFSAQNYKLGEVEVRSPKAHFMAYQAGVKVSKAFDLSSWKVEPSLAAH
                     YVDASSKRLSVAVNDNTFSQRFGRYLKTEVGVGVTKGQWQLSSHLGLLKGNEIGKQHF
                     AGFKLGYSW"
     gene            complement(11802..12806)
                     /gene="fbp"
                     /locus_tag="PXD18_001659"
     CDS             complement(11802..12806)
                     /gene="fbp"
                     /locus_tag="PXD18_001659"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HDL6302077.1"
                     /translation="MKTLGEFIIEKQAEYPGAKGELSGILSSIRLAAKIIHREINRAG
                     LSQDILGTAGSENVQGEAQMKLDVFANETMKKALLAREDVAGFASEEDDNFVAFDNER
                     GRNAKYILMTDPLDGSSNIEVNVSVGTIFSIYRRVSPIGTPVTQEDFLQEGRKQVAAG
                     YVTYGSSTMLVYTTGNGVNGFTYDPSLGLFILSHPDLKTPTEGKYYSINEGQYVTFPQ
                     GVKRFIKYCQETDEAIKRPYSSRYIGSLVSDFHRNLLKGGIYIYPTSTVYPKGKLRLL
                     YECNPIAFLAEQAGGMATDGINPILDIKPTELHQRVPFFVGSTSMVKQAGEFMQEFAK
                     "
     gene            12930..13721
                     /locus_tag="PXD18_001660"
     CDS             12930..13721
                     /locus_tag="PXD18_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HDL6302078.1"
                     /translation="MNNLRIKMISPEIALAKYNELDVLEINHSKVKAKIALQGAQLLS
                     WQPKNTQQDVLWLSEIEPFQTGVAIRGGIPICHPWFGTDKKPAHGTARIQAWNLLEHT
                     SSADGIRVVLGLENQAKLEMILGEVCELYFTHLAPEPAQAALHTYFQVGDITKTEVQG
                     LATQCFDKLTNQEIEVPSPRKISENVDCIYPAQAVNFIQDFANQRTIKVEHINATETV
                     LWNPWHNTVSAMTETAYQNMVCVETARINTLLQQNETLGVRILVR"
     gene            complement(13789..14478)
                     /locus_tag="PXD18_001661"
     CDS             complement(13789..14478)
                     /locus_tag="PXD18_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HDL6302079.1"
                     /translation="MLQLRKANERGDGSFSWLKSYHTFSFANYYDLKHIHFSHLRVIN
                     EDFIAPNHGFGKHPHDNMEILTYMLKGRVAHEDSMGNKTEVKAGEFQIMSAGTGVFHS
                     EINPDPNETLHLYQIWIIPNQKDVTPRYNQDRFAPKEGATLILSPNAEEGSFKIYQDM
                     KLWRYQYPTAKSEQLALEPNRSYWLQVVKGNLNINGVELSTSDALGIRQEKALEINTQ
                     DDVEFLLFDLV"
BASE COUNT         3895 a         2977 c         3243 g         4395 t
ORIGIN      
        1 tttaccgtgt ctaatcaatc atcaaacgca ccgcaaagag aaacgttctc cggacgtggt
       61 gcatttatta tggcggctat tggttccgct gtcggcttag ggaacatctg gcgtttccct
      121 tatactactt atgaaaacgg cggtggggct tttattctgc cgtatatcat tgcccttttg
      181 accgcaggtt taccgctgct gttcttagat tattctatcg ggcataaata tcgtggtggt
      241 gcaccgctcg ctttccgccg tttcagctcg aaatttgaaa ccttcggttg gtggcaagtg
      301 ctgatcaacg tgatcatcgg gatttattat gcggtggtac tcggctgggc agcaagttac
      361 acctacttct cattcagcgg agcgtggggc gataaaccgg tggatttctt tatcggtgaa
      421 ttcttaaaaa tgggcgatat tactcaaggc gtgagctttg aatttgtcgg tatggttaca
      481 gggccgttaa ttgcggtatg gctgattgct attgctgtgt tggctatggg gatcaaaaaa
      541 gggatttctg ctgcctcaaa cctgctaatg ccgcagttga tcgtgatgtt cttagtgttg
      601 gtcggctatt cattaaccct accgggtgct gcgaaaggct tagatgcgtt atttacccca
      661 aactgggaaa aattggctga tccaagtgtg tggattgccg cttacggtca aatcttcttc
      721 tcactctcta tctgcttcgg gattatgatt acctatgctt catacctgaa aaaagaaacc
      781 gatttaaccg gttcaggctt agtggtgggt tttgcgaaca gtggttttga attattagcg
      841 ggtattggcg tatttgcggc actcggcttt atggcaacgg ctgcagggca agaagtgaac
      901 gaggtagcaa aaggcggtat cggcttggca ttcttcgctt tcccaaccat tattaaccaa
      961 gcaccaatgg gggcattagt tggcgtgctg ttctttggtt cactcacctt tgcggcatta
     1021 acctcattta tctcggtaat tgaagtgatt atttcagcgg tgcaagacaa actcaattca
     1081 ggtcgtgtga aagccacgct actagtcggc attccgatga tggtggtatc tgtcttgcta
     1141 ttcggtacaa ccaccggttt accaatgctt gatgtgatgg ataaattcgt aaaccaattc
     1201 ggtattgttg cggtggcgtt tgtttccttg attgcgattg tcaccagcga gaaattaagc
     1261 acccttgaaa aacacctgaa cgaagtttct tcattcaaag tcggctttat ctggcgttta
     1321 tgtatcgtta ttacctccgg cgtactggca tttatgttat tcagcgaaat cgccaaagtg
     1381 tatcgtgaag gttatgaagg ctacccaagc tggtttgtaa acaccttcgg ctggggaatg
     1441 gcaatcggct tagtggtggt ggcttatttg ctatcaaaaa tggcgtggaa aaatgaacca
     1501 aaaggagatg agtaatgagt tcagcagcaa ttattaccat ggtggtggca atgacgatta
     1561 tctggggcgg tttacttttt gcgattaaac gtctgccgaa agaagaacaa taatttgcaa
     1621 atttttgtat aaaaaagccc gcttgttagc gggcttttgg ctatacggta atcccaaatt
     1681 tctcttccac aaaggcttgg aaatcggtgc aaccgccaac gtggttatta tccacaaaaa
     1741 tttgtggtac agttgcaacc ggcttgccaa cacgaggctc taggtcttgt tttgaaatat
     1801 tttcagcgat catatcaata aatttaaaat caaaatcgct taattcttgt ttcattttct
     1861 cggctaatgt ttttgcacgc acgcagtatg ggcaagataa acgtccataa atttcaacaa
     1921 acatataatg ttccttctat aaagtaaaag tgagcgaatt gtccgttaaa cggctctgtg
     1981 taagtgtaac aattttttca accttttagg ataaatttct tcaccatcac ggcaagcagt
     2041 taatgtgata tactggggca aatttacaag tagagaaaca gagatgaccc aattaatgac
     2101 gtttgaggag cttgatttaa gccctcaatt acttaaagcc ttagcacaca aaggctataa
     2161 ccgcccaacc gctattcaac aagccacgat tccggctgcg ttagaaggac gtgatctgct
     2221 cggttcagcc cctaccggta ccggcaaaac cgccgctttt ttactgccgg caattcagca
     2281 tttattagat tatcctcgcc gcaaaccagg ggctcctcgc attttaattc ttaccccaac
     2341 ccgagagctg gcaatgcagg tggcggagca agcccaagca ctggctaaat ttactcagtt
     2401 gagcattgcg actattaccg gtggggtggc gtatcaaaat cacggtgaag tctttaataa
     2461 aaatcaagat attgtggttg ctaccccggg tcgtttaatg caatacatta aagaggaaaa
     2521 ttttgactgc cgagcggtgg aagtgctgat ttttgatgaa gcagatagaa tgttgcaaat
     2581 gggcttcggg caagatgcgg agaaaattgc ggcagaaacc cgttggcgta agcatacttg
     2641 gttgttttca gcgaccctcg agggcgagtt attagaggat tttgccgagc gattattaaa
     2701 tgatccgatt aaagtcgatg ccgaaccaag tcgccgtgag cgtaaaaaaa ttcagcaatg
     2761 gtattaccac gccgataatg tagagcataa aaccaaatta ttagctcgta ttatcagcga
     2821 attttcggtg gaaagagcga ttgtgtttgt ccgccgccga gaagatgtgc gagaactcag
     2881 cgaaaccttg cgtaagcggg gaattcgttc tacttatctc gaaggtgaaa tggctcagac
     2941 ccaacgtaac caagctatta accgtttaaa agaaggcgta gtgaatgtgt tagtggcaac
     3001 cgatgtggcg gctcgaggca ttgatataga cgatattgat ttcgtgctga actacgattt
     3061 accttatagt gcggatactt acttgcaccg tattgggcgt accgctcgtg ctggcaaaaa
     3121 aggttcggca atttcattgg tggaagctca cgattataaa ttactcggca aaattaaacg
     3181 ttacaccgaa gaagtactaa aacctcgcat tatcgagggc ttagagcctc gcaccaaagc
     3241 cccgaaagat ggcgagctaa atgtgaccag caagaaagaa aaagcacgca ttaagaagaa
     3301 aaaagaggcg aaaaaagaag cggcaaaacc aaaagtaaaa gtccgccaca aagataccaa
     3361 aaatatcggt aaacggcgta aaccaagtag tgaatcggct gcggttaaac aggcataatg
     3421 atacaagcgg ttattttctg aagatttttt gcaaaaattt catcaaaaat aaccgtttgt
     3481 ttatatctac cttactgcca tttggaacag aatcacttct gcttggcagc tgaaagtgat
     3541 ccacattttc atcagaaacc cttctgcaat ttgtgtaatt tcgctttgaa tttcacaagg
     3601 ttcggtttcg accgattttg ctttttgtgc gaaaaattcg accgcttgtt gagccagttc
     3661 ttcgctctca tacaccgctt caaaggcaat ttggcggtct gcattatcca acatagaatc
     3721 gccttttagc cggcacatat tatgtgcctc agccgctttt tgttgcatcg ttttgctcat
     3781 attacacctt atccgtaatt tgttttaacc aagtgtagga ttgatgctgt ttttgctcat
     3841 cgaaaatgta gtttaccgcc ataatttcat caatttccac tcgtgctttt agggctttaa
     3901 gttgttgttc aacgctttgc gggctaccaa ttaaggagca ttcggtcatt tggcggacaa
     3961 cggttttctc ttgtcggtat agagcatttt gctcaaaggc aaccggcccg aaatgcggca
     4021 caatttctgc tttcacaaaa ttttcccaca ctttgtcgtc agattcgagc ggtggttgca
     4081 gattttgttg ggcattggtc actacattta agaaaaactg ggtttgggtg gtcgccagtt
     4141 gtgttgcttc ttcatcggtt tctgccacaa tggcattcac acctaaaatc acataaggtt
     4201 tatctaacac atcagagggc ttaaaatgtg agcggtaaat gcggattgca tcgtccataa
     4261 agcgaggggc aaagtgtgaa gcgaaggcgt aaggcaagcc tcgttcagcc gctaaatagg
     4321 cactttcagg gcttgagcct agaatataaa acggcacatt tagcccttgt gccggatagg
     4381 cggaaacagg gtttgtaccg tcaaagtagc cttttaattc gctgatttca tcggggaaag
     4441 gcaaactctg ggcgtaaggc agaggcggtt cgcatatcgg tgccgggggc tcgcccaagc
     4501 cccagttcta ctcggtttgg gtagagtgtt tcaagcgtgc cgtattgttc tgccacaata
     4561 taagggctgt ggttgggtaa catcacgcca ccggagccga ctcttaattt ttcggtgtgg
     4621 gagagggcgt gttgaatcaa taattgcgtg gcggaactgg caagattttt catattatgg
     4681 tgttcggcaa tccaatagcg ttcaatgccg atattttctg cgtgttttgc taatttcacc
     4741 atagaatcga ccgcttgttt ggcagtttgc ccttcacgaa tcggcacaag gttgagaatg
     4801 gataagtttg tcattttgtt ctccgagttt gcatataaaa aaggctgaat agctttacta
     4861 ttcagcactt gtaaaaccat ctccttaata tggggacgat tatttcttac tcaagaagac
     4921 cacagcgtca atatagcgtt ggataaaatc attggtcgag cttgaatcgg aaaatccttc
     4981 taggttaagc tggtattgac cattcacgaa aaacgccggt acaccacgaa tttggaagtc
     5041 ttcagctaat tgaacttgtt tattgactaa accgtttact gcaaagctgt tgataccgct
     5101 gtcaaactgt tctgcactaa tgctgttagc gatgaagacc gcacgaatat cgtccattga
     5161 tttaaacgca tctttttgag cggcttcaaa caaggcggtt tttactttat cttccgctcc
     5221 taatgccatt gccaatgccc aagcacgggt taagttttca gattggcgac ctaagaaatt
     5281 gacgtgatat tgcactaatt tgctgtctgc aggcaatttc gctttgattt ggcttggaat
     5341 tttgtaattt agctcaaaat cgtaacagtg ggggcagtag aatgagaaaa attccaccac
     5401 ttctttttga gccgatgggg ctttacgcac ctcaatatac tctttgccgg cagttggatc
     5461 tgctgcaact gcggttgcgt taaatgcaaa aagggcagaa agagcaacca gtacggtttt
     5521 taatgcaaat tttttcataa tgattccttc aaaaatatga taagtgagaa ataagacaaa
     5581 cttaatcgtt taaaattcca cgagctcgga gcaatgcggt tttaaaatca tcttcataat
     5641 cttttttaat gcccggaatc ggctcaaatt tatcggcgtt tcgcattttg agctgataaa
     5701 tcaaaacctc gtcacgcagg gcatgaaaat tatccggctc gcttacttcc accgaaagct
     5761 gttgcagaat atcaattaag tgaagatcgg ggtttttccg ccaatgttcg ccaagcagtt
     5821 ccaatagctc ttctaaacgt ttgcatttca tagtatgcct cttaaaaaac ttgttgaata
     5881 gtaagcggaa taatatactt ttagccctca tttggcaaaa aaattcaggt ttggagaggg
     5941 aaatggaaga gaaaatttca gcggtaattt tagccggagg tttggctcgg cgaatgaatg
     6001 gagcggaaaa agggttgcaa ctgttagatc aaaaaccgtt gatttcgcac ctgttagccc
     6061 gactttcgcc acaaatcgag gatatttggc tcaatatcaa tcgttcggtg gaacaatatc
     6121 aacaacttta ccctgaatta ccttattacc aagacagctt gcccgatttt caaggcccac
     6181 taagtggaat gctttccggg ttcgagcaga ttgagagcga ctatttactg tttgtgcctt
     6241 gtgacacgcc gtttattcca acccaactat tgcacaagtt acacacggca ttacgcatta
     6301 atcaggctca aattgcctat gctcacgatg gcgaccgccc acacccaacg gttgccttgg
     6361 tgcatcgttc ggtggcggaa aatttaagag cgtatttagc ctccggcgaa cgccgattat
     6421 tgtggttttt tcaaacccaa aaaagtgtgg cagtggattt ctcggcatat aaagccgcat
     6481 ttcgcaattt taattgttta gaagatttaa cggctttcaa tccatatccc atcaaaaccc
     6541 tggcgattac tggctatagc ggcacaggca aaaccacctt attggaaaaa ttaatcccaa
     6601 aattgaccgc ttgcggtatt cgggttggct tgattaagca ttcccaccac aatgttgata
     6661 ttgataaaaa aggaaaagac agctatcgct tgcgagaagc aggagcaaac ccgactatgg
     6721 tcgtgtgtga tgaacgttgg gcattaatga cggaaactaa gcaggcagca gaaactaaac
     6781 aagcggtcga attttcacaa ttaattgcaa aatttgaccc agagacggta gatttagttt
     6841 tagtggaagg ctttaagcac gaaacaatgc cgaaaattca actacaccgt aaagaaattg
     6901 aaaaaccgtt gccggcgtta gaccagtgga caatcgcgac cgcaaccgat tatccgcttg
     6961 agcgggaaaa tcggttggat attaatgatg ttgaacagct tgctgatttt attcggcagt
     7021 ggctagaggc aagcaaagag ccggctaatt aattgactaa aaagccccta aagtaagcga
     7081 ttgcttagtt taggggctaa tagcaattac cagctatatc ccagtttgaa gccggcaaaa
     7141 tgttgtttgc cgatttcgtt acctttcaat agaccaaggt gagagcttaa ttgccattga
     7201 ccttttgtaa cacccacgcc cacttcagtt ttcagataac gtccgaaacg ttggctaaag
     7261 gtattgtcat tgactgccac actcaagcgt ttgctgctgg catcgacata atgtgcggca
     7321 aggctaggct caactttcca gctggagagg tcaaaggcct tgctgacttt cacacctgct
     7381 tggtaggcca taaagtgtgc tttcgggctg cggacttcta cttcacccag tttgtaattt
     7441 tgtgcgctga agcgatagta acgtgtacca acagcaggct gaacttgtac gccggctaag
     7501 tcgaagttat gtccaagatt tgccccaatc gccataatat gacggttaaa gcggttctcc
     7561 ccgaacaggt cgatacggtt tttcgcttta ccgtagctac cgtctaggct gacgaaagtg
     7621 ccgttttccg aatgccattt accatatagg cttgccatca gtaagttgga tttaccgttc
     7681 actccctcat caaattccgc attagcgtgg ttgcgggata gcatcacacc ggcattgata
     7741 ccgtttgcaa gcggtaattc tatgcctaac tgagtgaggt tggtttgttg ctcatacggg
     7801 cgatataaat ccgattggtg ttcggttttt tgatgttcga tactgctcca aacgtggaat
     7861 ttatcgtgtt ttgcgaacag ttggcgatct aagtcttgcc cgatttgcaa cgcagaattt
     7921 gcctgtgccg atagctcgga aagagcggta ttggcatatt ggcttaccca gtcgctttgt
     7981 tgaatattac tactgtcagt gtctgcgtgt gcttgtagat gctcacaatt tgcaccattc
     8041 tcttggcaaa gttttagtgc ctcagcgttt aaaattgctt cactatttcc agcagttata
     8101 cgtaaggtag ctaattttgc ttctacttgt tttgcaatat tttgtgcagt ttcaaccgct
     8161 tgttctacgt tagcaatttg cgcagcggat gctttagcat tgttttctgc tgtagtgagt
     8221 gcagcactcg cttgtgtgac tttctgtttt gctaccgtaa tttgcccttg gatttggcgg
     8281 taatacgttg gatagtaacg gcggtagtaa tcagcatatt gttgcaaacg ggttaattcg
     8341 ctatttgctt ggctaagctg agattgtgcg tttgcagcgg cttgtttagc atttttctct
     8401 gcttggcgct ctttctcggc ttctgcgttc aaacggctga tttcctgttt ttgtttatcc
     8461 gcttctgcaa tagcatggtc taattccgct ttcgccgttg caatcgactg attccgatct
     8521 ttagcatctt ttaacggatt gtataagcga tagccgttgc ttcgatttgc cagcacataa
     8581 cgatatgcac ctaaatcaac ataaccgttt tccagtgaaa ctttagcttt atcagcctga
     8641 gcctgatggg ttaaggttaa taaacttaac gggctaacca cttcagcttc tttgccactg
     8701 ttgcgtaatg caagagtgaa agtcccctcg gcgagaccat ttacttgtag gtgatcgcct
     8761 ttgccagcag caatatcggt taagtagttg attttggcat taccttggaa attaccgtca
     8821 ataatcaacg tattaaaacg agtcggtatc tcgcctgtta caaatttttc attcaggttg
     8881 atggttgaac cgttttctgc cactaaattg ccagtacggc tatccccagt gtttgtccag
     8941 cttgcttggt tagctaaacg aatgctcgtt gttgctgctg cttgaatggt gccaatcagg
     9001 ttcgctttgc cgatgtgtaa ttggctctgt tctgccaagc tgacatcacc attaatttgt
     9061 gttgtgggca gtgttgcaaa aatttcatta gaaacgaccg cttgtgtatc acagcttgtt
     9121 ttaccagtgt actcagaata gtagcaactt ggagtttgct cgttgataaa gcctaaatgt
     9181 agctgagcat ggtcattcgc tgacaagttt gcttgcaggt ttgagacatt acgaccaaca
     9241 taaagctgag cgtattggtt tagctgcata ttatcagcct taaattgacg attttgccaa
     9301 tcatcggcat aaactacatc ttgcttattg atcgcatcat aagcgtgagg ggtcggtctg
     9361 ccggaaagta gcactttacc tcctttcaca gttagatcgc cgtttaagtt caaaccacca
     9421 gagaaggtat aaatactatt gagcttttct tgctctattg gtgcgttttt acgggctaat
     9481 actttgttga tcgcttgatt gcgatctgca gctaaaaatt cccaatgctc gctgcttaag
     9541 ccaccgcgag gaacaggttg ttttggatca ccttttaatg caaagtattc ccgaattttc
     9601 gttttcggat tggtgaacag ataaatatct gcaccagcta ctagcccctt accccaagtt
     9661 acttcagagg cagttgccgg tggtgtagag gcttttggat catacaccac attcaaacga
     9721 ccgttatgct gggtgttatc tgtttcgcca ataaaaccat taaagctatt gtagcgatgc
     9781 tccagacctt tttgcgcgag tacttgtttt actgctgcat ccttgttaga agacaggaag
     9841 gtccaatggg cattacttgc gccattcgtt ggcatatatt ggtttggatt gcctttgagc
     9901 gtaaagtaat cggtacggtt attagcatgt gggttgatat attcataaat atcagcactg
     9961 ttttctttcc acgttcccca ttttaagtcc gttgcttcag ggggcttcgg gccattaatg
    10021 gtgagtgttg cagctttttg taggtgatta ttaacaatac gcgcaccatc atcactattt
    10081 tgaatacgat taaacgcaat gttgttgccg ttgagatcta aacgaccacc acggaagcca
    10141 aagtaaatct tatttggatc gacttgatca gcactgttta atacaacggt tgaacggccg
    10201 ctcacaatac caacttggtt aaatgcagat tttttgccat tttcacccgc ttgttgggtc
    10261 aaaatgacag tgccttgtcc aacactaatg tcaccaaggt tttcgccttt accgttaata
    10321 tgtagtgtcc cttcgcccaa tttagataaa cggtcacctt gtgggttttt gacttgccaa
    10381 ttaacttgtt taccttttgc cactacaatt ccagctccta cccagctttg atcattttca
    10441 gggcgaactg ttgcattagc attgaaattt aatgcgccag caccttggtc aatatcggtt
    10501 tttaatacga tagtgctatc ttgtccttca atgtttaggg tttttccggt gttatcttgc
    10561 ggaagttgta gctgaggtgt gccaccatag cctaatggag aagcgctatt gtctttaatt
    10621 gaacgatcag caagcgaaac cgttaagttt ttccctttat taccaatgct actgtcttta
    10681 ccctgtgcag accattcaaa aacggcattt tgttgcgcat tggttaatgt gccggcaata
    10741 tcttcggcaa attgtttatc gtgataatcc tgacggataa taccggcacg gttgtagtag
    10801 ttgtttgcag gcgtaccaaa ggtgtaagta gccagtagta gccagcgttt cgttttctga
    10861 tcgtagccat acacacctga accgctatca ccacgagtac caaatgcagt taatgctcca
    10921 tatgggctat tgtttaatgc atttcctcta aaatctagcc agtaatcgga attatgtacc
    10981 gcgattggta aatgaactcc cccggttaaa tattggtaag atgttgaaat ttggttgtct
    11041 ttatgctcgg tatttttgac tatttgacga ccagagccta agcgagcaaa gtgagtaaaa
    11101 cgactactat cttggtaggc tgaagcatta ttacccagat cagtcactgt tgcaggtgcg
    11161 acctcagtga ctaatttatt gagacgtggc acttgataat cttgatgttg cccaccttca
    11221 acaattccat agtcgttacg atcaacgact ttgtaagtgt agtggtgtgc atcggcatta
    11281 gtgcctgggg cgccaaattc cacagtattg tattgtgtat tatgggcaac gctgactaaa
    11341 tattgcggtg caactagagt tgctatccct aagttacggt ttgcagcact aaaatctggc
    11401 atcggtacat ttgggaagag tgcatctaat gtattgccac ttttatcttt aatttcaata
    11461 ttgcttgcac ctacggtgaa tttaccctta ttctccgcaa aatcacggta gtattgaaga
    11521 tcgatatcat ctctgaaaac agaggctgtt gcagataaac taacagcaaa tgccacaaag
    11581 ctggcaaggt aagaaagtgg aaagttttta tttatcataa aatgttaata aattgctaat
    11641 attaatggag taaaaaggtg gggtattcta tagataatta tttatttggc aagaggtctt
    11701 acctgttttt tatacaaatt tacaatctta agataggcaa aagcagctac ggaatacgca
    11761 gctgctttgt tgaaagtttt attgagtgat aagcaggagc attattttgc aaattcttgc
    11821 ataaattcgc ccgcttgttt gaccattgag gttgaaccga caaagaacgg tacacgctgg
    11881 tgtagctctg ttggcttaat atctaaaatc ggattaatac catctgtcgc cattcctccg
    11941 gcttgttcgg caagaaacgc aatcgggttg cattcataga gtaaacgcaa tttccctttt
    12001 ggatatacgg tggaggttgg gtaaatataa ataccgcctt ttaataaatt gcggtggaaa
    12061 tcggacacca gcgagccgat atagcgtgaa gagtatggac gtttgatggc ttcatcggtt
    12121 tcttggcaat acttaataaa gcgtttcaca ccttgtggga aagtaacata ctgcccttca
    12181 ttgatggagt aatattttcc ttcggtaggg gtttttagat cagggtgtga aagaataaat
    12241 aagcctaatg acggatcata ggtaaaaccg ttcacgccat tgcctgtggt gtaaaccagc
    12301 atggttgaag aaccataagt aacataaccg gcggcaactt gtttacgccc ttcctgcaag
    12361 aaatcttctt gtgttactgg ggtgccgata ggggagacac ggcggtaaat agagaagatt
    12421 gttcccacag aaacattcac ttcaatattg gaggagccat caagcggatc ggtcattaaa
    12481 atatattttg catttctccc acgctcatta tcaaaggcaa caaaattatc atcttcttcc
    12541 gatgcaaagc cggcaacatc ttcacgtgca agtaacgctt ttttcatcgt ttcgttggcg
    12601 aatacatcaa gtttcatttg ggcttcaccc tgtacatttt cagaacctgc agtacctaaa
    12661 atatcttgac ttaaaccggc acggttgatt tctcgatgaa taattttagc ggctaaacga
    12721 atagaagata aaatcccact taattcccct tttgcccctg ggtattctgc ttgtttttca
    12781 ataataaatt cgccgagtgt tttcattttt ttctccttcg ctatgttaga atgcccttat
    12841 tataacgatt acctttaaag aggtagcggt ttaagcttta attctgtgat ccacttcaca
    12901 ttttatcttt caagatgagg agcaatacga tgaataatct acgaatcaaa atgatcagcc
    12961 ctgaaatagc attagcaaaa tataatgaat tggatgtttt agagattaat cactccaaag
    13021 tgaaggctaa aattgcattg caaggtgcgc agttactgag ttggcaacct aaaaatactc
    13081 agcaagatgt attatggtta agtgaaattg aacctttcca aacaggtgtg gcgattcgtg
    13141 gcggcattcc gatttgccac ccttggtttg gtacagacaa aaagcctgct cacggcacag
    13201 cccgtattca agcgtggaat ttgctggaac atacttcctc agcagatggg attcgtgttg
    13261 ttttggggtt agaaaatcag gcaaaactcg agatgatact aggcgaagtc tgtgagttgt
    13321 attttactca cttagcaccg gagccggcac aggctgcatt gcatacttat tttcaggtcg
    13381 gtgatattac gaaaacggaa gtacaaggct tagcaacaca atgttttgat aaattgacaa
    13441 atcaagaaat tgaagtgcca tcacctcgca agataagtga aaatgtggat tgtatttatc
    13501 cggcacaagc ggtgaatttt attcaagatt ttgcaaatca gcgcaccatt aaagttgagc
    13561 atattaatgc taccgaaacc gtactttgga atccttggca taataccgtt agtgcgatga
    13621 cagaaacggc gtatcaaaat atggtatgtg tggaaacagc acggataaat accttacttc
    13681 aacaaaatga aacgctagga gtgagaattt tggtgcgata atgtttaatg agagcaagca
    13741 gctgaattag taatattttt tacaaattta accgcttgtc tcttgtattt acactagatc
    13801 aaacagtaaa aattccacgt catcttgagt gtttatttca agtgctttct cttgacgaat
    13861 gcctaaggca tcgctggtgg aaagttcaac gccattgatg tttagattcc ctttcaccac
    13921 ttgtagccag taactgcggt ttggctctaa tgccagttgc tctgatttgg ctgttgggta
    13981 ttgataacgc cacagcttca tatcttggta aattttaaat gaaccttctt ctgcgtttgg
    14041 cgaaagaatc aaggttgctc cctctttcgg ggcaaatcta tcttggttgt agcgaggggt
    14101 cacatctttt tggtttggga taatccaaat ctggtaaagg tgtaaggttt cattcggatc
    14161 tggattaatt tctgaatgga aaaccccggt tccggcagac ataatttgaa attcgccagc
    14221 ttttacttcg gttttattac ccatactgtc ttcgtgagcc acacgtcctt ttaacatata
    14281 agttaaaatt tccatattat cgtgcgggtg cttgccaaaa ccgtgattag gtgcaatgaa
    14341 atcttcgtta attacccgta aatgtgaaaa atggatatgt tttaggtcgt aataattggc
    14401 aaaggaaaaa gtgtggtagc ttttaagcca gctaaaagaa ccatcgcctc gttcattggc
    14461 ttttctcagt tgtaacatta tctattcctt atgtaagtgt taagttgtgc
//
LOCUS       DANLXD010000066        14324 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.066, whole genome shotgun sequence.
ACCESSION   DANLXD010000066 DANLXD010000000
VERSION     DANLXD010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14324)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14324)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14324
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.066"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            86..1168
                     /gene="serC"
                     /locus_tag="PXD18_001662"
     CDS             86..1168
                     /gene="serC"
                     /locus_tag="PXD18_001662"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HDL6302080.1"
                     /translation="MTEIYNFSAGPAMMPKKVLEKAQQELLNWLDQGTSVMEVSHRGK
                     LFMELAAQSEADLRKLYNVPDNYRILFLQGGARGQFAAIPMNLIGKKGKALYLNSGHW
                     SATAAKEARNFAEIDEINILETEPQLKVSRLDFSDIAEQYDYIHYCTNETISGVEIFD
                     IPNVGNTPLVADMSSNILARGIDINKFGVIYAGAQKNLGPAGITIVIIRDDLIGNARK
                     DTPSIWNYATQRDADSMINTPPTFAWYLCSLVFQHLLAEGGLKATEERNLAKATLLYE
                     YLDSSTFYYNTVAHENRSLMNVTFTTGNDELNAKFVAEATACGLQALKGHKVLGGMRA
                     SIYNAMPIDGVKALIEFMKVFEQRNA"
     gene            complement(1225..2202)
                     /locus_tag="PXD18_001663"
     CDS             complement(1225..2202)
                     /locus_tag="PXD18_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HDL6302081.1"
                     /translation="MTLAVAAIIGGLIILVWSADRFVEGAASTARHFGMTPLLIGIVV
                     IGFGTSAPEMLVSASSALSGSPGIALGNAYGSNITNIALILGLTAIIKPLSVNSDVLK
                     KELPILLAVTLLSAYLVYDANVTQLDAIILLAVFFVYMAWTIITAMKSKNDALSLDVD
                     AELTNSAKMGLGKSILWLIIGLVSLVISSQFLVWGAVEVAKFFGVSDLVIGLTIVAVG
                     TSLPELASSIAAARKGEVDLALGNIIGSNLFNTLAVVGIAGAIEPMQVSAEVFSRDVL
                     MMSALTFLLFIFGINLYRRTEGGRINRLEGLLLFAAYVGYNFYLFKTAG"
     gene            2314..4881
                     /gene="glnD"
                     /locus_tag="PXD18_001664"
     CDS             2314..4881
                     /gene="glnD"
                     /locus_tag="PXD18_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     uridylyltransferase/uridylyl-removing protein GlnD"
                     /protein_id="HDL6302082.1"
                     /translation="MMKNSNELKTLLSAFTEQQRQAFQSENVLSLLAQRSQFYDQLLQ
                     ALWQDFGLAQYEHITLLAVGGYGREEMFPLSDLDILVLTEKPLEEAIQQRLNELFALL
                     WDSKLQLGTSVRTLEECIQIGKAEISVATNMLEGRFLLGNKSLWLRLKEALYQPDFWD
                     IKAFFRAKMAEKNERYARYHNTSYNLEPDLKHSPGGLRDLHLISWIMLRHYGVSSFVD
                     LLNKGLLYPEEYKELIAAQAVLFRMRFALHLQLKRYDNRLRFDRQLQLSEILGYQGEA
                     NQAVELMMRDYFQATKSISQLSQLLLNSFEQAYVNELQKNAQKQPLDQYFYRQEQQLF
                     VVERKIFKTQPTTMLDLFFHLTNDPTLIANADTLRQLRLCLQQQHEPMCFLPEMREKF
                     VQLFAQPKVISRAIVPMHQLGFLSAYLPQWKGIEGLMQFDLFHIYTVDEHTVRVMLNL
                     ENFSEDPSRAFFPLCHQLFATLSEKPLLYLAALFHDIGKGREGEHAQVGALDMREFAE
                     LHGFSQAQINDMVWLVAEHLTMSITAQRRDIHDPQIISEFAKKVQNQTALSSLLCLTV
                     ADICATSESLWNDWKASLFTQLYQFTLQQLAQNLNYQAVAQEHRLQALELMKFVLSAD
                     ERIALNAFWQPCPERYFLHHTPTQLVWHALHYVKTRRLPMVLISNEYARGGTEIFVCC
                     QDQPQLFARIAQLLSQKRISIHDAQIITTENGVVLDSFIVSERDGDDDLTDERCMQIQ
                     QAMMKMLSLTETGIKFTKKPVKHLSFKRKTRLRFLPPSSKQQTEFELFTLDREGLLAQ
                     IGYIFNRLRLNLINAKITTIGERVEDFFVVSNDQGKALSEQEQLELKAILITELDSE"
     gene            complement(5058..5816)
                     /locus_tag="PXD18_001665"
     CDS             complement(5058..5816)
                     /locus_tag="PXD18_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005567524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL6302083.1"
                     /translation="MITVKNLHHKIGNATILNNINLTIPNGGITALIGANGAGKSTLL
                     SLIARLQPIQQGEIHLNELNIANTASQTIARQLAILTQDNVIHSRITVKDLLLFGRYP
                     HHQGRITSHDNAIVEEALVRFDLSTFSHRFLNELSGGQRQRALIAMTFCQQTDHILLD
                     EPLNNLDMFHARELMKLLRKLTDELALTTIMVVHDINIAAAYADTIIAMKDGGIKMIG
                     TPKEIITTENLKTVFNLDAEVLECQGKPLVIHHI"
     gene            complement(5836..6712)
                     /locus_tag="PXD18_001666"
                     /pseudo
     CDS             complement(5836..6712)
                     /locus_tag="PXD18_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607611.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
     gene            complement(6765..7733)
                     /locus_tag="PXD18_001667"
     CDS             complement(6765..7733)
                     /locus_tag="PXD18_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDL6302084.1"
                     /translation="MFSFFRLNLFLLILLIPISASVGVADFHWSEIFHSSEQSQIFFI
                     SRLPRTLAVILVGATLAVAGMVLQIVLKNRFIEPSMIGTSQSAAIGILLASLLFPTSA
                     LLLKMSIATLSALMGMGLFMLLIRQLPPHQQLMLPLIGIVFGNVIEAISTFIAYETDS
                     LQVLSIWFSGDFSGILAGRYELLWITAILAVVVYVMADQLTIAGLGENISTNLGINYK
                     QMTWLALIVVAMITAIVVVTVGQIPFIGLVVPNIVSRIAGDRLRKNLPAVVVLGANLV
                     LICDILGRAINAPYEVPISTIFGIIGTVIFLYLLLKEKRAEEKARG"
     gene            complement(7827..8726)
                     /locus_tag="PXD18_001668"
     CDS             complement(7827..8726)
                     /locus_tag="PXD18_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005700892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL6302085.1"
                     /translation="MIKKALFALTATAVFAASAFAKDVTIPTARGEVTFKETPSKIAV
                     FDTGSLDTLQALGVKIDGMPEFKVLSYLKPSADKAVNVGTVFEPDLEALNSLNPDLII
                     VGTRTAKKFDEVSQIAKTIDMTDNGDKLIESGLQRLDSFGKLFNKEAETEKLKAEINT
                     LLDQTKAAVKGKGNGLIILVNGGKISAFGSGYRLSWIHDNLGIPMADSSIKNTGHGQP
                     VSFEFIQKLNPDWLFVLDRIAAIGQEGQSAQQVLDNELVRQTKAWKNGNIVYLSAASY
                     LAPGGYEQMKTDLTNIKTAFEKK"
     gene            8900..10363
                     /locus_tag="PXD18_001669"
     CDS             8900..10363
                     /locus_tag="PXD18_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDL6302086.1"
                     /translation="MAEYSGTTQEKMKDKQVEQINISPHSIEAEQAVLGGIMLSNDHW
                     DNVAERVQPHDFYNYAHRIIFEQMAELVRHNKPIDIITLDQALKDKGVLQDVGGFAYL
                     AELSKNTPSAANILAYADIVRDRSDLRSVISAGNQIAEMGYKTKGRNSKEVLDEAERI
                     VFEIAEKRNNANEGPQRIDDILLKTLARMDTLSKNRHNGGVTGVSTGFVDLNKKTAGL
                     QPSDLIIVAARPSMGKTTFAMNLCENASLVDIEDKDDLDEQGNPKKKPAKPVLIFSLE
                     MPADQIMMRMLASLSRVDQTKIRTGQISDDEDTAKISSTMAILQERNNIYIDDSSGLT
                     PTELRSRARRIYRENGGLSLIMVDYLQLMRAPGFADNRTLEIAEISRSLKALAKELEV
                     PVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSDLKGIAE
                     IIIGKQRNGPIGRVRLTFQGQYSRFDNYTGGHYDDEY"
     gene            10353..10658
                     /locus_tag="PXD18_001670"
     CDS             10353..10658
                     /locus_tag="PXD18_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgL domain-containing protein"
                     /protein_id="HDL6302087.1"
                     /translation="MNTKPTQPITLCAIYRSKAKEGMYLYVPKRDQFEQVPETLRQLF
                     GKPEFVMMFNLTGEKPLVRAKNEEVLQLLIEQGYYLQMPPPPENLHKAFIAQQKGEK"
     gene            10658..11107
                     /gene="nrdR"
                     /locus_tag="PXD18_001671"
     CDS             10658..11107
                     /gene="nrdR"
                     /locus_tag="PXD18_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HDL6302088.1"
                     /translation="MRCPFCSTEETKVIDSRLAASGYQIRRRRECISCKERFTTFESA
                     ELVVPYVIKNNGSREPFDAEKLRTGLRRALNKRPVSADDVEKAISQIIIQLQAMGERE
                     VPSRHIGTLAMNALKQLDKVAYIRFASIYLSFSDIEEFIKEIEKLKE"
     gene            complement(11181..11363)
                     /locus_tag="PXD18_001672"
     CDS             complement(11181..11363)
                     /locus_tag="PXD18_001672"
                     /inference="COORDINATES: protein motif:HMM:NF015431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6302089.1"
                     /translation="MALLADSTVDRLVAENGLVEVLGETENPKFDLTMIYAAHRYPSS
                     IVRAFVGFVLEQVKAN"
     gene            complement(11332..12042)
                     /locus_tag="PXD18_001673"
     CDS             complement(11332..12042)
                     /locus_tag="PXD18_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6302090.1"
                     /translation="MNLNTLRLFVAVIQHGSLSKASERLNVPIATISRQIADLEKELN
                     IQLFDRQKSGVKPTMAGQRLYEQVHLSIEQLATAKEVLFEEQGNLKGKLRLSASPACE
                     PVLAWIADFQAAYPQVQVHCTLTDRLLDLSADGIDVAFRIGQLHGEQFIAKKVGQIGS
                     KWVAHPKFLARFGTPSTVKDLKNFPIAAWAKNEASVITLGTGRQAVEIPYLFSSNDSY
                     AIEYMAKSSGSACRQHGG"
     gene            complement(12039..>14324)
                     /locus_tag="PXD18_001674"
     CDS             complement(12039..>14324)
                     /locus_tag="PXD18_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302091.1"
                     /translation="NYERIGDYQKANLILKNIHNQDDFVQWLSTEQGKKLYSRVGYDK
                     GVWEALSVLLPERFDFEVFEVIDYSKEWSWFEIIVENLFWRQPEKINMQKLHQFFKNS
                     PYFNQATWINILYQLATEINHPLNIKYLHNKLYSFSLADRDEIWTAFIALESDQCPAI
                     ERLLTWCQKSSGQENIEPEALLLGAIAVSWLFTSTDKRSRNGYINALAHLLWNRLEIA
                     LALFKEFIEVNDPYVMEGILSAIHGAVAYSENSSGLKALALEIDNQIFNQPETEEIYP
                     NVLVRDYARHIIEYSLQKDEYSSDDIEIIRERITPPYRSSFPQNLPTNEEIDKKYHSD
                     GQRIIIRSMTTEYGRGMCGYGDFGRYTFEAKFRNWESYKFGNLINVDLLSNYACQMIF
                     EQFGYDDKKHLEFDKETRSRYWRRDDTNKIERIGKKYQWLALYEILARVMDNFPTFSN
                     RYADEIGLEYITNLDNFYLPKTQIKIVPPTKTDVFFQYINQKQCKTKHYFTIQNDELI
                     DDWVKINDFPDVSNLLEVTINDEQWLVLERHDDFRELAKFGQKETYDRQMWLQIRSYL
                     VKESQFSKAKNWLAQQDFMERWMPEGNEHYGMNIHQFFAENTLNEWQEIYRHRENKSP
                     SFKVIPSVDSHTWESTYGNDGISFYAPIPMLYHGMKMKNAIKDGYWVDLQNNLVCFNP
                     EINEKFQNSLLVKKDKFLDFLKEHKLKLVWTVLGEKHAYKESKFLQELSGVYYLYGKN
                     QQVQGSIKHFIQEIEHWGEKQ"
BASE COUNT         4590 a         2806 c         2778 g         4150 t
ORIGIN      
        1 taaaataatt tttctgtttt tattctacca ttacgctttt tttcagatag aatagaatca
       61 atattattac tatacgaggt gaaaaatgac agagatatat aacttcagtg ccggcccggc
      121 aatgatgccg aaaaaagtac tcgaaaaagc gcaacaagaa ttattaaatt ggctagacca
      181 aggcacatca gtgatggaag tcagccaccg tggaaagcta tttatggagc tggcggcaca
      241 atctgaagca gatttacgca agctgtataa tgtgccggac aattatcgta ttctatttct
      301 tcaaggtggt gcaagggggc aatttgcagc cattccaatg aatttaatcg gtaaaaaagg
      361 caaagcgctt taccttaatt cagggcattg gtcggcaaca gcagcaaaag aagcacgtaa
      421 ctttgcggaa attgatgaaa tcaatatttt agagactgaa ccgcaactta aagtgagtcg
      481 tttagatttc agcgatattg cagagcaata tgattatatc cattattgca ccaatgaaac
      541 catcagtggg gtagaaattt tcgatattcc gaatgtcgga aataccccgt tagtggcaga
      601 tatgtcgtct aatatcttag cccgagggat tgatatcaac aaatttggag taatttatgc
      661 cggagcgcaa aaaaatctag ggcctgctgg cattacgatt gtgattattc gtgatgattt
      721 aattggcaat gcacgcaaag ataccccatc tatttggaat tatgcaactc agcgagatgc
      781 tgattcgatg attaataccc cgccaacttt tgcttggtat ttatgttctt tagtgttcca
      841 acatttactg gcagagggtg gtttgaaagc tactgaagaa cgtaatcttg ctaaagctac
      901 attgctttat gagtatttgg atagttcaac attctattac aatacggtag cacacgaaaa
      961 ccgttcctta atgaatgtaa cctttaccac gggtaatgac gagctaaatg caaaatttgt
     1021 ggcagaagcg accgcttgtg gtttacaggc attgaaaggc cataaagtat taggtggaat
     1081 gcgtgcctca atttataacg caatgccgat tgatggggta aaagcactca ttgaatttat
     1141 gaaggtattt gaacaacgta atgcttaatt caagcttaag aatataaatt aaagagccac
     1201 gtttgtggct ctttgaattt ggcactagcc cgcagtttta aacaaataga aattatagcc
     1261 tacataagcg gcaaagagta ataagccctc taaccgatta attctgccac cttctgtccg
     1321 acgatagagg ttgatcccga aaatgaataa taagaaggtg agagccgaca tcatcaagac
     1381 atcgcgagaa aacacttccg ctgaaacttg cattggttct atagcaccgg caatccccac
     1441 cacggctaac gtattaaata agttagaacc gataatgtta cctaaagcta aatccacttc
     1501 tcctttacga gcagctgcaa tagaagaggc taattcaggt agtgaggtgc ctaccgccac
     1561 aatagtaagc ccgattacca aatcactcac accaaaaaat ttagccactt caactgctcc
     1621 ccagactaag aattgggaac taattactag cgatactaaa ccaataatta gccaaagaat
     1681 ggattttcct aatcccatct tagcactatt ggttaattct gcatcaacat ctaagcttaa
     1741 tgcatcattt ttacttttca ttgcggtaat aattgtccac gccatatata caaaaaacac
     1801 agcaagtaaa ataatcgcat caagttgagt gacgtttgca tcataaacca aataagcaga
     1861 aagcagggtg acagccagta aaatcggcaa ctcttttttt aacacatcgg aattaactga
     1921 tagtggttta attattgcgg ttaaacctaa aatcagcgca atattggtaa tgttagaacc
     1981 gtaggcatta ccgagagcga tacccggcga tccgcttaat gcagaagatg cagatacgag
     2041 catctccggt gcagatgtac caaaaccaat gaccacaata ccgattaaca atggtgtcat
     2101 accaaaatgg cgagccgtag aggctgcccc ttccacaaaa cgatccgcac tccaaactaa
     2161 tataattaag ccaccgataa tagcggcaac agcaagtgtc ataaactatc cttttagatg
     2221 aaaaacataa aggcattata agcattttag ccaaaataaa tataggcaaa cgaaaataaa
     2281 tgacctatta ttttgccagt ttaggaagag attatgatga aaaacagcaa cgaattaaaa
     2341 acgcttttat cagcatttac ggagcaacag cggcaagcat ttcaatccga aaatgtactc
     2401 agcttacttg cacaacgtag ccaattttat gaccaactac tgcaagcact ttggcaagat
     2461 tttggactcg ctcaatatga acatattacc ctattagcgg taggggggta cggacgtgag
     2521 gagatgtttc cgctttcgga tctggatatc ttagtgttaa ctgaaaaacc gctagaagag
     2581 gctattcagc agcgtttaaa cgaactattt gccttgcttt gggacagcaa actgcaactt
     2641 ggcaccagtg tgcgtacgct cgaagaatgt attcagattg ggaaagcaga aatttcggtt
     2701 gccactaata tgttggaagg gcgattttta ttgggtaata aatcgctttg gctaagatta
     2761 aaagaagcac tttatcagcc ggatttctgg gatattaaag cgttttttag agcgaaaatg
     2821 gcggaaaaaa atgagcgtta tgcacgttat cataatacta gctataacct tgagccagat
     2881 ctcaaacata gcccgggagg attgcgagat ctgcatttaa tctcttggat tatgctacgg
     2941 cattatggtg tatcttcttt tgtcgatctc ctcaataaag ggctacttta cccggaagaa
     3001 tataaggagc tgatcgcagc acaagcggta ctttttcgga tgcgttttgc acttcatttg
     3061 caactgaaac gttacgataa tcgccttcgg tttgacagac aattacaact gagtgaaata
     3121 ttaggctacc aaggcgaagc aaatcaagcg gtggaattaa tgatgcgaga ttattttcaa
     3181 gccacaaaat ctatttcgca actgagccaa ttattgttaa acagttttga acaagcctat
     3241 gtaaacgagt tgcaaaaaaa tgcacaaaaa caaccgcttg atcagtattt ttatcggcaa
     3301 gaacagcaat tgtttgtggt cgaacgcaaa atatttaaaa cccaacccac aacaatgttg
     3361 gatctctttt ttcatcttac taatgaccct acgttaatag cgaatgccga caccttacgt
     3421 cagttgagac tgtgtttaca gcaacaacac gagcctatgt gctttttgcc tgaaatgcga
     3481 gagaaattcg tacagctttt tgctcaaccg aaagtcataa gccgagcaat agttccaatg
     3541 caccaactgg gttttttaag tgcttatcta ccgcaatgga aggggatcga agggctaatg
     3601 caattcgacc tattccatat ttatacagtc gatgagcata cggtcagagt catgttaaat
     3661 ttagaaaatt ttagcgaaga tccaagtcgg gcgtttttcc cactatgtca tcagctattt
     3721 gcaacgcttt ctgagaaacc gttgctctat cttgcggctc ttttccacga tattggcaag
     3781 ggtagagagg gcgaacacgc tcaagttggt gcgctggata tgcgagaatt tgcggaacta
     3841 cacggttttt ctcaagcaca aatcaatgat atggtttggc tggtggcaga gcatttgaca
     3901 atgtcgatca ccgcacaaag acgagatatc cacgatccgc aaatcatcag cgaatttgca
     3961 aaaaaagtgc aaaatcagac cgctttatct tcactacttt gtttaacggt tgcagatatt
     4021 tgtgcaacca gtgagagcct ctggaatgat tggaaagcct cgctgtttac ccaattatat
     4081 caatttacgc tacagcaact ggctcaaaat ttgaattatc aagcagtggc acaagagcat
     4141 cgcttgcaag cattagaact gatgaagttc gtgctttcag ctgatgagcg aatagcatta
     4201 aacgcatttt ggcaaccttg cccggagcgt tattttcttc accatacacc gactcagttg
     4261 gtatggcacg ctctgcatta tgtaaaaact cgccggttgc cgatggtttt aatcagtaat
     4321 gaatatgccc gtggtggtac agaaattttt gtatgttgcc aagatcaacc tcaactgttt
     4381 gctcgaatcg cccaattact cagccaaaaa cgcattagca ttcacgatgc acaaattatt
     4441 actactgaaa atggtgtagt gttagacagc tttattgtaa gtgagcgtga tggtgatgat
     4501 gatttaaccg atgagagatg tatgcaaatt cagcaggcga tgatgaaaat gttaagctta
     4561 actgaaacag gcataaaatt taccaaaaaa ccggtgaaac atttgtcatt taagcgtaaa
     4621 actcggctgc gttttcttcc tccgtcatca aagcaacaaa ccgaatttga actttttacc
     4681 ttggatagag aagggttgtt ggcacaaata ggctatattt ttaaccggct ccgattaaat
     4741 ttaattaatg cgaaaattac gactattggt gaaagggtag aggatttctt tgtggtcagt
     4801 aatgatcaag gaaaagcttt atcggaacaa gaacagttag aactaaaagc cattctaatt
     4861 accgaactag atagtgaatg aaaacaaccg cttggagtga agactgcaag cggtaaattt
     4921 ttcaacgttt taggtaaatt aaatcacgag ttaagagagg ttgagaattc aagaaattag
     4981 aaactaaata taagtttcta tcgtttagat taataaatta agacgcaatt tttattaatt
     5041 accatgatct tcaaacgtta aatatgatga ataactaaag gtttgccttg gcattctaac
     5101 acttcggcat caagattaaa cactgttttt aaattttcag tggtgataat ctcttttggg
     5161 gtgccgatca tcttaattcc accatctttc attgcaataa tagtatctgc gtaagcagca
     5221 gcaatgttga tgtcgtgtac caccattata gtagttaagg cgagttcatc ggttaatttt
     5281 cgtaataatt tcattaattc ccgagcatgg aacatatcta aattattcag tggttcatct
     5341 aataagatat gatcggtttg ctgacagaag gtcattgcaa ttaatgcccg ctggcgttgc
     5401 cctccggata attcatttaa gaatcggtgg gagaaagtcg ataaatcaaa tcgtaccaga
     5461 gcctcttcta caatggcatt atcgtgcgaa gtgattctgc cttgatgatg agggtaacgc
     5521 ccaaataaca gcagatcttt gacggtaata cggctatgaa tcacattatc ttgggtcaag
     5581 atagccagtt gtcgagcgat agtttgagaa gctgtgttgg ctatattcag ctcatttaag
     5641 tggatttcac cctgttggat aggttgcaag cgtgcaatta aagagagcag ggtggatttg
     5701 cccgcaccat ttgctccgat taaagcggta ataccaccat ttggaatggt taaattgata
     5761 ttattcagaa tcgtggcatt cccgattttg tggtgaagat ttttaaccgt tatcattttc
     5821 ttccttaatt tatggttatt ttttccgttt taaaatgaga taaataaaga caataccgcc
     5881 aataaattca ataacgacac tcagaacccc ttgcattttc agcacttgct cgaagattgc
     5941 ctgccctaaa attaaggtga tggcagagat taaaaaagtc attggtattc gcacgctatg
     6001 gcaaacagtc gggctaattg cattaacaat ggcacaaaca agtagcccta gaaatagaat
     6061 cgggccaaca agtgcggttg aaacagacac caacaatcca caacagatta gtaattgacg
     6121 tgaaaattga tgatattcta acccaagccc aattgcctta tctttgccaa gtaacaaaat
     6181 atctaattta tgccgttgta accagaccca aatggcagag agaatagcga tacagcctcc
     6241 aatccaaagt aatgtggggg tagtcaggtt aaatgaggca aagaagagcc ttgagcaacg
     6301 gcaaactctg ttgggtcgac attcgttgca acaaattatt taggcttcta aataagacac
     6361 caaagatgac accgattaaa agcattcggg ttaaatcgga tcgatttcga ttcagtgaac
     6421 taaatagtaa tattgatgcc cctagcatta acaaggtttc aaagaaaaac ttatagcttg
     6481 ggtctaactg agtaaagcct aaaccgccaa ataaaaatac taacgaggtt tgcaatagca
     6541 agtagagcga atcgaacccc aaaatacttg gagttaaaat aggattatgt gtgagtgttt
     6601 ggaatagcag ggtcgaaata ccaatcgtat aagcaatagt acagagcaaa ataagctttt
     6661 tgccacgcag ttgcaatata aagtcccaat tacctttcgc attataggtc atataaaaca
     6721 gaatacttgc taataagatt aagcttaaaa cgataaagcg tgatctaacc acgagccttc
     6781 tcctcagccc gtttctcttt gagcaataaa tagaggaaaa tcactgtccc aataatccca
     6841 aaaatagtag aaatcggcac ttcataaggg gcattgatgg ctcgccctaa aatgtcacaa
     6901 atcaggacta aattcgcacc taacaccacg accgcaggca gatttttacg caatcggtca
     6961 cctgctatgc gagagacaat attagggacg accaagccga taaacggaat ctgtccaacc
     7021 gtcaccacga caatagcggt aatcatcgcc accacaatta aggcaagcca agtcatttgt
     7081 ttgtagttaa tgcctaagtt ggtactaata ttttcaccaa ggcctgcaat ggttaattga
     7141 tctgccatca cataaaccac aacagccaga atagcggtaa tccagagcag ttcataccga
     7201 cctgccaaaa taccggagaa gtcgccggaa aaccaaatcg aaagcacttg taggctgtca
     7261 gtttcataag caataaaagt gctgatagct tcaataacat tgccaaaaac gatcccgatt
     7321 aatgggagca ttaattgttg atgaggcggt aattgacgaa tgagcaacat aaaaagcccc
     7381 attcccatta atgcacttaa tgtggcaata gacattttta acagtaatgc tgatgttggg
     7441 aaaagtaaac tagcaagtaa aataccaatt gccgcacttt ggctagtgcc aatcatacta
     7501 ggctcaataa agcggttctt cagcacaatt tgtaatacca tacctgcaac ggctaaggtt
     7561 gcaccgacta atatcactgc gagcgttctt ggtaaacggc tgataaaaaa gatctgactt
     7621 tgttcggaag aatgaaaaat ttcactccaa tgaaaatctg ccacacccac actggcactg
     7681 attggaatga gcaatattaa aagaaataga tttaatctaa aaaaagagaa catagtgata
     7741 aatagcaagc ggtcatattc tctctctttt ttacaaatgc aggcacttgc aaaaatagga
     7801 ggaaatctga ccgcttgtaa ggttaattat tttttctcaa atgctgtttt aatgttagtt
     7861 aggtcggttt tcatctgctc ataaccaccc ggcgctaaat atgaggcagc acttagataa
     7921 acgatattac cgtttttcca agctttagtt tgacgaacta attcattatc caacacttgt
     7981 tgggctgatt gaccttcttg tccgatagcc gcaatacggt ctaacacaaa caaccaatcc
     8041 ggattgagtt tttggataaa ttcaaacgaa acaggctgac cgtgaccggt atttttaatg
     8101 ctagaatctg ccattggaat ccctaaatta tcgtgaatcc aacttaaacg ataacctgaa
     8161 ccaaatgcag aaattttgcc accattgact aaaataatca gtccgttacc tttacctttt
     8221 actgctgctt tggtttggtc taataaagta ttaatttctg cttttagttt ttcggtttcc
     8281 gcttctttat taaataattt gccgaaagaa tcaagacgct gtaatccgct ttcgattaat
     8341 ttatcgccat tatccgtcat gtcgatggtt ttcgcaattt ggctgacttc atcaaatttt
     8401 tttgctgtgc gtgtgccaac aatgatcaaa tccggattta aagaatttaa cgcttctaaa
     8461 tccggctcaa ataccgtacc gacattcacc gctttgtctg cactcggttt aagataagaa
     8521 agcaccttaa attcaggcat accgtcaatt tttacaccta aggcttgtaa agtatccaaa
     8581 cttccggtgt caaacacggc aattttagac ggggtttctt tgaaagtaac ctctccacgt
     8641 gcagttggaa tagtaacatc tttggcaaat gcagaagcag caaacacagc agttgcggtc
     8701 aatgcaaaca aggctttttt aatcattgga taactccatt tatattgaaa ataattctca
     8761 aagattttaa cgaaaattga ttttaagtaa agcggaaaat aacaagcggg cgaattttgc
     8821 ctaaaatttg caaatttcaa tttaattaaa attccgatac actatgtaca tcaatacgtc
     8881 attatagcaa gagaaaaata tggcagaata tagcggaaca acccaagaga agatgaaaga
     8941 taagcaggtt gagcaaatta atatctcacc acattcgatt gaggcagagc aagcggtgct
     9001 tggtggcatt atgctcagta atgatcactg ggataatgtt gctgagcgtg tacaaccgca
     9061 cgatttttac aactatgcgc atcgaattat ttttgaacaa atggcggagt tggtgcgcca
     9121 caataaaccg attgatatta ttacgctgga tcaagcctta aaagacaaag gggtgctgca
     9181 agatgtagga ggttttgcct atttagccga gctttctaaa aataccccga gtgcagcaaa
     9241 tattttagcc tatgcggata ttgtgcgaga tcgttccgat ttaagaagtg taatcagtgc
     9301 cggcaatcaa attgcggaaa tgggctacaa aacgaaaggg cgtaactcca aagaagtgtt
     9361 agacgaggca gagcgaattg tgtttgaaat tgcagaaaaa cgcaataacg ccaatgaagg
     9421 tccacaacgt attgacgata ttttgcttaa aacactcgct cgaatggata cgctatctaa
     9481 aaatcgccat aacggcggag ttactggtgt ttctaccggg tttgttgatc tcaataaaaa
     9541 aaccgcaggg ttacagcctt cggatttaat cattgtggca gcccgtcctt caatggggaa
     9601 aactactttt gcaatgaact tatgtgaaaa tgcctcatta gtggatattg aagataaaga
     9661 tgatttagac gaacagggta atccgaagaa aaaaccggca aagccagtgc taattttcag
     9721 cctggagatg ccggcagacc aaattatgat gcgtatgctt gcctcacttt ctcgggtcga
     9781 tcaaaccaag atccgaaccg gtcagatttc agatgatgaa gacactgcta aaatctccag
     9841 cacaatggca attttacaag aacgtaataa tatctatatt gatgatagct ccggtttaac
     9901 accgaccgaa ttacgttctc gagcgagacg gatttatcgt gaaaatggcg gattaagctt
     9961 gattatggtg gactatctcc aattaatgcg agcgccggga tttgcagata atcgtacttt
    10021 agaaatcgca gaaatttccc gttctttaaa ggcactagcg aaagaattag aagtgccagt
    10081 agtcgctctt tctcagctaa accggagttt ggaacaacgt gccgataaac gtccggtaaa
    10141 ctcggatttg cgtgagtcag gttctattga gcaagatgca gacttaatta tgtttattta
    10201 tcgtgatgag gtctataacg acaattccga tctgaaaggc attgcggaaa ttattatcgg
    10261 aaaacaacgt aacggcccga ttggtcgggt gcgtttaacg ttccaagggc agtattcccg
    10321 ttttgataat tacacaggag ggcattatga tgatgaatac taaaccaacc cagccaatca
    10381 cactttgtgc gatttatcgc agtaaggcaa aagaaggaat gtatttatat gtgcctaagc
    10441 gtgaccaatt tgagcaagtg ccggaaacat tacgccagtt atttggtaag cctgaatttg
    10501 tgatgatgtt taatttaacc ggtgaaaagc cattggtgcg tgctaaaaac gaagaagtgt
    10561 tacaattact tatagagcaa ggctactatt tgcaaatgcc acctccgccg gagaatttgc
    10621 ataaagcctt tatcgcacaa cagaaagggg aaaaataatg cgctgcccat tttgttccac
    10681 tgaagaaact aaagtgatcg attcacggct tgcagcaagc ggttatcaaa ttcgccgccg
    10741 ccgtgaatgt ataagctgta aagaacgttt tactaccttt gaatcggccg aattagttgt
    10801 gccttatgtg atcaaaaata atggtagccg agagccgttt gatgccgaaa aattaagaac
    10861 agggttaaga cgtgcattaa ataaacgccc tgtcagtgct gatgatgtcg aaaaagcaat
    10921 tagccaaatc attattcagc tgcaagcgat gggcgaacga gaagtgccga gtcgccatat
    10981 cggtacattg gcaatgaacg cacttaaaca attagacaaa gtagcatata tccgctttgc
    11041 ctctatttat ttaagcttta gtgatattga agagttcatt aaagaaattg aaaaattaaa
    11101 agagtagttg caaaaaaaca taaaaaaatg accgcttgtg agtttaaaat ccacaagcgg
    11161 tcatttttct ttaaaaatac tcaattagct tttacttgtt ccaacacaaa ccctacaaac
    11221 gcccgcacaa tgctagacgg ataacgatgg gcggcataaa tcatcgtcaa atcaaatttg
    11281 gggttttctg tctcacccaa gacttccacc aagccatttt ctgccaccaa tctatccacc
    11341 gtgctgtcgg caagcagagc cactgctttt tgccatatat tcaatggcat agctgtcatt
    11401 gctggaaaaa agatagggaa tttctaccgc ttgtctgcca gtgcctagcg tgatgacgct
    11461 tgcttcattt tttgcccaag cggcaatggg gaaatttttc aaatctttga cggtgctggg
    11521 cgtgccaaag cgtgccaaaa atttagggtg tgccacccat ttactgccga tttgccccac
    11581 ttttttggcg ataaactgtt cgccgtgtag ttgcccaatc cgaaacgcca catcaatgcc
    11641 atctgccgac aaatccaaaa gacggtcggt cagcgtgcaa tgcacttgta cttgtggata
    11701 agctgcctga aaatcagcta tccacgccaa aacaggctcg caggcagggc ttgccgacag
    11761 gcgtaattta ccctttaaat tgccttgctc ttcaaacaac acttctttgg cagtggcaag
    11821 ctgttcaatg gacaaatgca cctgttcata caggcgttgc cctgccattg tgggtttaac
    11881 gcctgatttt tggcggtcaa agagttgaat gttaagctct ttttccaaat cggcaatttg
    11941 acggctaatg gttgcaatcg gcacattgag tcgctcggag gctttggaga gactgccgtg
    12001 ctggataacg gcgacaaaga ggcggagggt gttgaggttc attgtttttc tccccaatgt
    12061 tcaatttctt gaataaaatg tttaatactg ccttggactt gttgattttt accatataga
    12121 taataaacgc ctgaaagttc ttgtaaaaat ttactttctt tataagcgtg tttttcaccc
    12181 aacacagtcc aaactaactt taacttatgc tcttttaaaa aatccaaaaa tttgtctttt
    12241 ttaaccagta agctattttg aaatttttca tttatctctg gattaaagca aaccaaatta
    12301 ttttgtaaat caacccaata accatcttta atcgcatttt tcattttcat tccgtgataa
    12361 agcataggaa ttggcgcata aaatgaaatg ccgtcattgc cataagtaga ttcccaagtg
    12421 tgagaatcga cactaggtat taccttaaat gaaggcgatt tattttccct atgtcgataa
    12481 atttcttgcc actcatttaa tgtattttcg gcaaaaaatt gatgaatatt cattccatag
    12541 tgttcattac cttctggcat ccatctttcc ataaaatctt gttgtgccaa ccaatttttt
    12601 gcttttgaaa attgagattc tttaactaaa taacttctaa tttgtaacca catttgccta
    12661 tcataagttt ctttttgccc aaattttgct aattcacgaa aatcatcgtg tctttctaga
    12721 acaagccact gttcatcatt aatcgttact tccaaaagat tactaacatc aggaaaatca
    12781 tttattttta cccaatcatc aattaattca tcattttgaa tggtaaaata gtgttttgtt
    12841 ttacattgtt tttgatttat gtattgaaaa aatacatctg ttttagttgg cggtacaatt
    12901 ttaatttggg ttttgggtag ataaaagttg tccaaattag taatatattc aagccctatt
    12961 tcatcggcat agcgattaga aaaagtagga aaattatcca tcacccttgc caagatttca
    13021 tacaaagcca accattgata tttcttgcca attcgctcaa ttttattagt atcatctctt
    13081 cgccaatatc ttgaacgagt ttctttatca aactcaaggt gcttcttgtc atcatagcca
    13141 aattgctcaa aaatcatttg gcaagcataa ttacttaata aatcaacatt gatgagattg
    13201 ccgaatttat aactctccca atttcggaat ttggcttcaa aagtatatct gccaaaatca
    13261 ccatatccac acataccacg accatattca gttgtcattg aacggataat gattctttgt
    13321 ccatcagaat gatatttttt atcaatttct tcattggttg gtaagttttg gggaaatgaa
    13381 cttctataag gtggcgtaat tctttctctg attatctcaa tatcatctga tgaatattca
    13441 tctttttgca aagagtattc aataatatgg cgagcataat cacgaaccaa aacattggga
    13501 taaatttctt ctgtttcagg ttgattaaat atttgattat ctatctctaa tgcaagtgct
    13561 tttaagccag atgaattttc agaataagca acagctccgt gaatggcaga taaaatacct
    13621 tccataacat aagggtcatt aacctctata aattccttga ataacgccaa tgcaatttcc
    13681 aatctattcc ataataaatg agccagtgca ttaatatagc catttctact tcgtttatcg
    13741 gtagaagtaa atagccaact aacagcaatt gcacccaata atagtgcttc gggttcaata
    13801 ttttcttgac cacttgattt ctgacaccaa gttagtaatc gttcaattgc tgggcattga
    13861 tcagactcca aagcaataaa agctgtccaa atctcatctc tatctgccaa agaaaaagaa
    13921 taaagtttgt tatgtaaata ttttatattt aatgggtggt taatttcggt agccagttga
    13981 tataaaatat taatccaagt tgcttgatta aaatatggac tatttttgaa aaattgatgt
    14041 agtttttgca tattgatttt ttcaggctgc ctccaaaaga gattttctac aataatctca
    14101 aaccaagacc attcctttga ataatcaatc acttcaaata cttcaaaatc aaatcgttct
    14161 ggcaacaata cacttaatgc ttcccatacg cccttatcat agccaactct actatatagc
    14221 ttttttcctt gttcagtgct taaccattga acaaaatcgt cttgattatg aatatttttt
    14281 aatattaaat tggccttttg ataatcccca attcgttcat aatt
//
LOCUS       DANLXD010000067        14280 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.067, whole genome shotgun sequence.
ACCESSION   DANLXD010000067 DANLXD010000000
VERSION     DANLXD010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14280)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14280)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14280
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.067"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            166..597
                     /locus_tag="PXD18_001675"
     CDS             166..597
                     /locus_tag="PXD18_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3577 domain-containing protein"
                     /protein_id="HDL6302092.1"
                     /translation="MTTQTSTQKNYFNLHTTGIGYLNDIRLVEPKKGNPFYACRIAAL
                     VGESDSPEYRYFDMNVVGKETETLIKRCQKAVSEEKKVLVSFVMADLWFDTFTYSTDS
                     KFHKKGDTGVSVKGRLIRIKMIKIDGEIAYQEKPKSDEQSE"
     gene            615..1607
                     /locus_tag="PXD18_001676"
     CDS             615..1607
                     /locus_tag="PXD18_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005588345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6302093.1"
                     /translation="MLCWALLLDVQDLRVTFKTPDGDVTAVNDLTFSLNAGETLGIVG
                     ESGSGKSQTAFALMGLLADNGRISGSAKFNGQEILNLPETQLNRLRAEQIAMIFQDPM
                     TSLNPYMKIGEQLMEVLMLHKGMDHKTAFEESVRMLDAVKMPESRKRMNMYPHEFSGG
                     MRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKSEFNTAIIMITHDLG
                     VVAGICDNVLVMYVGRTMEYGTAEQIFYTPSHPYSIGLIGAVPRVDGQEEELITIPGN
                     PPNLLRLPSGCPFQPRCVHATKQCLKAPALTLLNDQRLRACFVPAEQLIRGNAS"
     gene            1604..2593
                     /gene="oppF"
                     /locus_tag="PXD18_001677"
     CDS             1604..2593
                     /gene="oppF"
                     /locus_tag="PXD18_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000994906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppF"
                     /protein_id="HDL6302094.1"
                     /translation="MNTEKKVILEVKDLSVHFNIKDTKSLFFAKHQTLKAVNHVSFQL
                     YEGETLGVVGESGCGKSTLARAIIGLVESSGGNILWLGKELTQQSAKEWKTIRSDIQM
                     IFQDPLASLNPRMTIGSIIAEPLKIYQPHLTAEEVKEKVRAMMMKVGLLPNLINRYPH
                     EFSGGQCQRIGIARALIVEPKLIICDEPVSALDVSIQAQVVNLLKSLQREMGLSLIFI
                     AHDLAVVKHISDRVLVMYLGNAVELGDYEQVYHDTKHPYTKALMSAVPIPDPQLERNK
                     QIQLLEGDLPSPINPPSGCVFRTRCPLADQHCIADKPLLKGRDNHVVACFKAE"
     gene            complement(2697..3455)
                     /locus_tag="PXD18_001678"
                     /pseudo
     CDS             complement(2697..3455)
                     /locus_tag="PXD18_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014326384.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
     gene            complement(3585..4226)
                     /gene="bioD"
                     /locus_tag="PXD18_001679"
     CDS             complement(3585..4226)
                     /gene="bioD"
                     /locus_tag="PXD18_001679"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HDL6302095.1"
                     /translation="MAKVFFITGIDTDIGKTIATGWYAKKLMQQGASVITQKMIQTGC
                     RGIAEDLLIHRKIQGIELTEEDKQGITCPYVFDYPCSPHLAAKLEPRTIERKKIETCT
                     ALLCEKYDYVLLEGAGGLCVPYNEEETTLDYLCQHQYPVILVTSGKLGSINHTLLSLQ
                     VLNSKRVSVHAVIYNLYPETDQVISQETQHFLRRYLEKYSPNTLFEIMDLISV"
     gene            complement(4244..4999)
                     /gene="bioC"
                     /locus_tag="PXD18_001680"
     CDS             complement(4244..4999)
                     /gene="bioC"
                     /locus_tag="PXD18_001680"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005755527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HDL6302096.1"
                     /translation="MDRIDKGRIKQRFSAAVSNYDQQARAQQQIHQRLLSLLSYIDRQ
                     AFQRALEIGCGTGGLTKQLMSQLQVEHWELNDLCDMREHLQSVLPQPFHFHCGDAEQL
                     PFPQQYDLIASASVVQWFEDKAGFIARCKVRLKKHGFLLFSTFTPENLTQIKHLTGVG
                     LTYPRLEDWQKWLVPEFEILALEHEEIVLHFDDPLAVLKHLKQTGVTATQQQRWTKGQ
                     LHAFCQQYQQHYRNAQHKVELTYTPMYVLARLT"
     gene            complement(5003..5650)
                     /locus_tag="PXD18_001681"
     CDS             complement(5003..5650)
                     /locus_tag="PXD18_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005758126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HDL6302097.1"
                     /translation="MKTQHISQQGDNLIVYFAGWGTPPSVVEHLILPENYDLCLCYDY
                     RDLHCDVDFSAYQHIRVVAWSMGVWVAERVMQGYPLLSATAINGTGLPCDDQYGIPEA
                     IFAGTLSGLNEDNRTKFERRICGSKTLLRDYQHYSMRPTLQEIHAELTALYTFLQQDH
                     RTDLISWSKAIVGSKDKIFPAQNQRAYWQDRCAITEIAGEHLLFPHFTHWETCWL"
     gene            complement(5647..6810)
                     /gene="bioF"
                     /locus_tag="PXD18_001682"
     CDS             complement(5647..6810)
                     /gene="bioF"
                     /locus_tag="PXD18_001682"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005719374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HDL6302098.1"
                     /translation="MIRYYQQQLADLKAQNQFRQLPQLIHRGRFIQREDNTMLNMSSN
                     DYLGLANNEALRQAFFTQYQDQLPALTSSSSRLLTGSFPIYDELESLMAQAFGRETAL
                     LFNSGYHANIGILPALADKKTLIVADKLVHASMIDGIRLAQCEFVRFRHHDYVHLEQI
                     LQKNDRTFERIIVVTESVFSMDGDCADLTQLVALKQRYPQVMLYVDEAHAIGVLGEKG
                     LGLAEQQGCINQIDILVGTFGKALGSMGAYVICDQVIRDYLVNKMRPLIFSTALPPFN
                     VAWTHFVFQQLPHLQAERAHLAQLSQHLRQAIVDIFQVPMPSESCIVPYILGDNELTV
                     RTAQRLQQQGYYCLPIRPPTVPKGTSRIRFSLTADMQVAEVEQFIACLRELAE"
     gene            complement(6807..8108)
                     /locus_tag="PXD18_001683"
     CDS             complement(6807..8108)
                     /locus_tag="PXD18_001683"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDL6302099.1"
                     /translation="MNEQQLLECDRQHIWHPYAALNADFPLFAVERAEGVYIQLKNGQ
                     QLIDGMSSWWSAIHGYNHPRLNHAATQQLSQMSHVMFGGLTHQPAVELAQQLVNILPE
                     SLDKIFFADSGSVAVEVAMKMAVQYQHAKGETQRYKFATIRSGYHGDTWHAMSVCDPV
                     TGMHSLFAKGLPVQYFLPQPPVKFGQAWQPEAMQPLQDLLAQHGDEIAGLILEPVVQG
                     AGGMYFYSPEYLVQAKALCEPYGILLIFDEIATGFGRTGKLFACEHANVVPDVMCIGK
                     ALTGGYLTLSATITNQAVADVICSGEAKCFMHGPTFMANPLACAVAAESIKLLLASPW
                     QQRIQQIEQQLRQELRQAEALDCVAEMRVLGAIGVIEMKAPVNMASLPPRFVQNGVWV
                     RPFGKLVYLMPPYIISSDQLSQLIHGTIRTLQEEYAHKESL"
     gene            8250..9137
                     /gene="psd"
                     /locus_tag="PXD18_001684"
     CDS             8250..9137
                     /gene="psd"
                     /locus_tag="PXD18_001684"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005755522.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDL6302100.1"
                     /translation="MNILEKKAQLSYWQRIKIAFQYVMPQLYLTRLAGWFAKQQWGAV
                     THFVIKLFAKKYHVDMSEAAKPNFSDYASFNEFFIRPLADNARPINQNPTALCLPADG
                     RISQLGHIEQDLLLQAKGHYFSLNDLLAGDEALAHHFKDGEFATTYLSPRDYHRVHMP
                     CDATLCKMIYVPGDLFSVNPFLAEHVPNLFARNERVICVFDTEFGKMVQILVGATITA
                     SMSTVWAGVINPPRPEKITTWTYEGESAVKLLKGQEMGAFQLGSTVINLFEKDRVQLA
                     SHLQVDSPVRMGEILAHQK"
     gene            9162..9716
                     /locus_tag="PXD18_001685"
     CDS             9162..9716
                     /locus_tag="PXD18_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL6302101.1"
                     /translation="MSQQFFDQVSLESQLEVSAEAVAKGIFDVLNQNPPALELNEVSH
                     ALQTLQQQAKFKEIEAVGAQFLAENAQKAGVNTTESGLQYEVLVAGEGQIPAREDKVR
                     VHYTGTLIDGTVFDSSVKRGQPAEFPVNGVIAGWIEALSMMPVGSKWRLTIPHNLAYG
                     ERGAGASIPPFSTLVFEVELLAIL"
     gene            complement(9776..10099)
                     /locus_tag="PXD18_001686"
     CDS             complement(9776..10099)
                     /locus_tag="PXD18_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005755520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302102.1"
                     /translation="MNWKAVLIFSVLGSLVSCASYSEHAVQRIEAGKSFAVTGNTKRI
                     NTMACQDNDDWYLDGYRVGKSFREHQQKMLIQRTAYCEEQTGKAVPDKFRHSWNSGYQ
                     QGLKR"
     gene            complement(10123..11226)
                     /gene="proB"
                     /locus_tag="PXD18_001687"
     CDS             complement(10123..11226)
                     /gene="proB"
                     /locus_tag="PXD18_001687"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005719361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDL6302103.1"
                     /translation="MKIDKTLVVKFGTSTLTQGSAKLNLPHMIDIVRQLAQLHQAGFR
                     LVIVTSGAIAAGRHYLNHPQLPPTIASKQLLAAVGQSQLIQTWEKLFAIYDIHIGQIL
                     LTRADIEDRERFLNARDTLRALLDNQIIPVINENDAVATSEIKVGDNDNLSALVAILV
                     QAEQLYLLTDQQGLFDRDPRKHPDAKLIADVDKITDHIRAIAGGSGTSLGTGGMSTKI
                     SAADVATRSGIETIIAPGNRPNVIVDLAYGQAIGTKFSVQADRLESRKQWLYAAPSAG
                     IITIDAGAENAMLIQHKSLLPAGIVNVEGRFSRGEVVKIRTQQGKDVALGMPRYNSDA
                     LHLIQGKHSQDIEQVLGYEYGAVAVHRDDMIVL"
     gene            11392..12380
                     /locus_tag="PXD18_001688"
                     /pseudo
     CDS             11392..12380
                     /locus_tag="PXD18_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252470.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
     gene            12455..13102
                     /locus_tag="PXD18_001689"
     CDS             12455..13102
                     /locus_tag="PXD18_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3560 domain-containing protein"
                     /protein_id="HDL6302104.1"
                     /translation="MTINTYAKFAPTVFVAKCSESHTKGEIITLTSKYGNETEVQVHN
                     LVKQDGEHYFYSFTRCDGMDSQSFAQQKAERYQGYADNAAKRSQDWVNAANEGCDFLS
                     LGEPIKIGHHSEKRHRNLIERNARRMDNAVAEMNKAASYESRIAYWEKMAGKIDLSMP
                     ESLEYFKFELDKAKTKHKELKDNPEKREHGYSLTYAKKAVNELEKKVKLAELLWA"
     gene            13126..13533
                     /locus_tag="PXD18_001690"
     CDS             13126..13533
                     /locus_tag="PXD18_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization protein"
                     /protein_id="HDL6302105.1"
                     /translation="MNRQGIYINGKQVFDSQGEDIQSIGFFGCNIQTVVGINKGSILV
                     SSNSNQLLVNGQSIELGSEPVLKIEVLGNVQKLSAGAADVSITGDAGSVDTVSGDVSI
                     KGNVASYVKTVSGDVRCRAITGSVETVSGDIYR"
     gene            13631..13981
                     /locus_tag="PXD18_001691"
     CDS             13631..13981
                     /locus_tag="PXD18_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302106.1"
                     /translation="MTTINLSQQERELVEFVWNNRNTPWFFHCSVSNVSRNNTSRQIA
                     VCVIKDNQLISLDELIAKLCGYKLRQNGLYVTVHNMDAVFDTLYRFMCKLNDEMEANE
                     NVCPYLSLAHYEVF"
BASE COUNT         4115 a         3116 c         2962 g         4087 t
ORIGIN      
        1 agcattctga aagggaacgc cacttttgtg ggaatgccac ctaaaccctc taccatctca
       61 gtgaagcatc attgagattt cattttactt ccacctcgcg gggaacattt ttcccgtgtt
      121 gggcaaggat gtttctccgc ttttttacat ttggagaaac aaactatgac aactcaaact
      181 tctactcaaa aaaattactt caaccttcat acaacaggca ttggctatct aaacgatatt
      241 cgtttggtag agcctaaaaa aggaaatcct ttttatgcct gccgtatagc agctctggtt
      301 ggcgaatctg actctcctga gtacagatat tttgatatga atgtagtcgg taaagagact
      361 gaaacactta tcaaaagatg ccaaaaagca gttagtgaag agaaaaaagt gcttgtgtca
      421 tttgtaatgg ctgatttgtg gttcgataca tttacttact caacagatag taaattccac
      481 aaaaaaggcg ataccggtgt atctgtaaaa ggtcgcttaa tccgcatcaa aatgattaaa
      541 attgatgggg aaatagccta ccaagaaaag ccaaaatcag atgagcaatc tgagtaattt
      601 tacctaagcc cgacatttta tgttgggctt tattactcga tgtacaagat ttgcgcgtaa
      661 cttttaagac cccagatggc gatgttactg ccgtcaatga tctgactttt tctttaaatg
      721 ccggtgaaac cctcggcatt gtcggcgaat ctggctcagg aaaatcgcaa accgcttttg
      781 ctctaatggg gctattagca gataacgggc gaatttcagg atcagcaaaa tttaatggac
      841 aagaaattct caacttgcct gaaacacaac ttaaccgctt gcgtgctgaa caaattgcga
      901 tgatcttcca agatccaatg acctcgctga acccttatat gaaaatcggc gaacagctaa
      961 tggaagtact gatgttgcat aaaggcatgg atcataaaac tgcgtttgaa gaatcggtac
     1021 ggatgttaga tgcggtgaaa atgccggagt cacgtaaacg tatgaatatg tatccgcatg
     1081 aattttccgg cggtatgcgt cagcgtgtga tgattgcgat ggcattactt tgccgtccga
     1141 aactcctcat tgcggatgaa cccacaactg cgctcgatgt gacggtgcaa gctcaaatca
     1201 tgaccttatt aaacgaatta aaaagcgagt ttaataccgc cattatcatg attactcacg
     1261 atctcggtgt ggtcgcagga atttgcgata atgtgttggt gatgtatgta ggcagaacca
     1321 tggaatacgg caccgctgag caaattttct ataccccaag ccacccttat tctatcggct
     1381 taattggtgc agtgcctcgc gttgacggac aggaagaaga actcattact attccgggta
     1441 atccacctaa cttattacgc ttaccgagtg gctgtccttt ccaaccacgt tgcgttcatg
     1501 caactaaaca gtgcctcaaa gcaccggcgt taaccttgtt aaatgatcaa cgtttacgcg
     1561 cttgttttgt ccctgccgag caattaatcc gaggtaacgc atcatgaaca cagagaaaaa
     1621 agtgatccta gaagtgaagg atttaagcgt tcatttcaac atcaaagata cgaaatcttt
     1681 attctttgct aaacaccaaa ctttaaaggc cgtcaatcat gtctcttttc agttatacga
     1741 aggcgaaacc ttaggtgtgg tcggtgaatc gggctgtgga aaatcaactc tcgcacgcgc
     1801 gattattggc ttagtggaaa gctctggcgg taatatttta tggctaggta aggagttaac
     1861 tcaacaaagt gcgaaagaat ggaaaacgat ccgtagcgat attcaaatga ttttccaaga
     1921 tcctttagcc tccctgaatc cacggatgac cattggcagt atcattgccg aaccattaaa
     1981 aatttaccaa ccccatttaa ccgcggaaga agtgaaagaa aaagtacgcg cgatgatgat
     2041 gaaagtgggc ttattaccta acttaatcaa tcgctatcca catgaatttt cgggtggaca
     2101 atgtcagcgt atcgggattg cgcgcgcctt gattgtggaa ccaaaactca ttatttgcga
     2161 tgagccagtg tccgccttag atgtttcaat ccaagcacaa gtagtgaatt tattgaaatc
     2221 tttacaacgc gaaatggggc tatcattgat tttcattgca cacgaccttg ctgtggtgaa
     2281 acacatttcc gatcgtgttt tggtcatgta tcttggtaac gcggtggaat taggtgacta
     2341 tgaacaagtc tatcacgata ctaagcatcc ttataccaaa gctttgatgt ctgcggtacc
     2401 gattcctgat ccgcaattag aacgcaataa acaaattcaa ttgcttgaag gcgatctccc
     2461 ttccccgatt aatccgccgt cgggctgtgt gttccgcacc cgttgcccac tggcagatca
     2521 acactgtatt gcagacaaac cgctcctcaa aggacgagat aatcacgttg ttgcttgttt
     2581 taaagccgag taatacacac aaccgcacaa aaaagtgcgg ttgttttttt gcgaatattc
     2641 acagtcagac tttcgtgata ctttcgctct gagataagga ttacgataca gagaagttat
     2701 tcaacaatca cacgtgcatt gatcggttgc actggacgat tattgtgtcc tttcatcaag
     2761 gtcgcaaacg cctcaacttg agattggcta atgttgtcat agtgttttaa cactaaccaa
     2821 tttacacctt cagaacaagg tggtgtagtt aatgacccgc tgaaacgata gtaatcgcgt
     2881 tttttcggaa ttaatgttgc tgggtcaaaa gcggtactaa gcgtatattt ctcccctgct
     2941 ttttgcggga agttttgcca aattggggct aaccattggt tttcacttga taatacatag
     3001 agcacgccaa gcacagcaag attcccttca ttgtctgcgt gtacaaaatg tgcttccatc
     3061 gggaaggatt tacctcaaat taagttttca ctcggcacat ggaaatggaa ttgtttaagg
     3121 gtaaaagtct ttccattaag ctgcatgcga ttacttgcct ctttgaaatc cacttgaata
     3181 gtatgcccat tattgacaat ctccacattg gaaggtcgat aatccagctt aatcggcgct
     3241 aacttaccat caatcgtatg cttgatatct attggtgttt ggtttttacc ttcgccacaa
     3301 atacggaatt tgggtgaaag ttcagcccaa tgttctggcg attcgtgtcc ggtgtatccc
     3361 caatgcgtgt gcgtttcttc tttcttaagg gggcttgtac acgctgtcaa tgctaatgca
     3421 cctaacgtaa gcacaaaaag gtttgatttt ttcatagcct agctcctgat taaaagagat
     3481 gaattgatga gacaacctaa actcaatgat gccttaatcc gagacgcttt catcttaggc
     3541 aaaacaacac tccatttcaa gtataacttg ctcaagaata tatcttagac cgaaatcaaa
     3601 tccattattt caaataaggt attaggcgag tatttctcta aataacgacg taaaaaatgt
     3661 tgtgtttctt ggctaatgac ttgatctgtt tccggataca agttgtatat cacagcatgc
     3721 acacttactc ttttggagtt gagtacttgt aaactcaata aggtatgatt aatactacct
     3781 agcttgccag aggtaactaa aatcacgggg tattgatgct gacaaagata atcaagggtg
     3841 gtttcttcct cattataagg tacacacaag ccgcccgccc cttccaataa tacataatca
     3901 tatttttcac acaaaagtgc ggtgcaggtt tcaatttttt tacgttcgat cgtgcgcggt
     3961 tctaatttcg cggctaaatg cggtgagcaa ggataatcaa acacgtaagg acaagtgata
     4021 ccttgcttat cttcttctgt aagctcaata ccttgtattt ttcggtgtat gagtaaatct
     4081 tcggcaattc ctcggcagcc tgtttggatc atcttttgcg tgatgacact tgcgccttgt
     4141 tgcatcagtt tcttggcgta ccaacctgtg gcgatggttt tgccaatatc ggtgtcgatg
     4201 ccagtgataa aaaaaacctt tgccatactt tttccttcta agattaagtt aaacgcgcca
     4261 gcacatacat cggcgtgtaa gtgagttcta ctttgtgttg tgcgttacgg taatgttgtt
     4321 gatattgttg gcaaaaggcg tgcaattgcc cttttgtcca cctttgctgc tgtgtggcag
     4381 taacgcctgt ttgtttcaaa tgttttaaca ccgctaaggg atcatcaaag tgcaacacaa
     4441 tctcctcgtg ttcgagggct aaaatctcaa attcaggcac tagccacttt tgccagtcct
     4501 caagacgtgg ataagttaac cccacaccgg tgaggtgttt gatctgtgtt aaattctcgg
     4561 gcgtgaaagt actgaataac aaaaatccgt gcttttttaa gcgcacttta caacgcgcaa
     4621 taaaacccgc tttatcttca aaccattgca ccacggaagc actggcaatc aaatcatact
     4681 gctgcggaaa gggaagttgt tccgcatcgc cacaatggaa gtgaaaaggt tggggcaaca
     4741 ctgattgcag atgctctcgc atatcgcaaa ggtcattcag ctcccagtgt tcaacctgca
     4801 actgtgacat taattgcttc gttaatccac cagtaccaca tccaatctct aatgcacgtt
     4861 ggaatgcttg tctgtcgata tacgacaata aactaagcaa acgttggtga atctgctgtt
     4921 gtgctctcgc ttgctgatca tagttcgata cagcggcaga aaaacgctgt ttaatgcgtc
     4981 ctttatcaat acgatccatg tgctacaacc aacaagtttc ccaatgggtg aagtgaggaa
     5041 acaacaaatg ctcccctgcg atttctgtta ttgcacaacg atcctgccaa taagcccgct
     5101 gattttgtgc agggaaaatt ttatcttttg agccgacaat cgccttgctc cacgagatta
     5161 aatctgtacg gtgatcttgt tgtaaaaagg tataaagtgc ggtcagttca gcatgaattt
     5221 cctgtaatgt gggacgcatg gaatagtgct gataatctct taacagcgtt tttgaaccac
     5281 aaatacgacg ttcaaattta gtccgattat cttcatttaa accagataac gtgccagcaa
     5341 aaatggcttc gggaatacca tattggtcat cacaaggtaa gcccgtgcca ttgatcgccg
     5401 tagcagatag cagtggataa ccttgcatca cacgctccgc tacccacacg cccattgacc
     5461 atgccaccac gcgaatatgt tgataagcgg aaaaatcaac atcgcaatgc agatctcgat
     5521 aatcatagca aaggcataaa tcataatttt ccggcagaat caggtgctcg accacgctcg
     5581 gcggtgtgcc ccaccctgca aaatagacga tcagattgtc gccttgctgt gaaatatgtt
     5641 gtgttttcat tcagcaagct cccgtaaaca agcaataaat tgttccactt ccgccacttg
     5701 catatctgca gtcagtgaaa aacgaatacg agaggttcct tttgggactg tcggcgggcg
     5761 aatcggtaag caataatagc cttgttgttg caaacgttgc gccgttctta ctgtcagttc
     5821 gttatcgccc aaaatataag gtacgataca actttcactt ggcatcggga cttgaaaaat
     5881 gtcaacaatc gcttggcgta aatgttgact aagctgagca agatgtgcgc gttcggcttg
     5941 caaatgtggt aattgttgaa agacaaaatg cgtccatgcc acattaaacg gcggaagtgc
     6001 cgtggaaaaa atcaatgggc gcattttatt aaccaaataa tctcggatca cttgatcgca
     6061 aatcacataa gcccccatag agcccaacgc cttgccaaac gtaccgacta aaatatcaat
     6121 ttggttgata cagccttgtt gttctgctaa ccctagcccc ttctccccca atacgcctat
     6181 cgcatgggct tcatctacat ataacatcac ttgcggatag cgctgtttta atgcgaccaa
     6241 ctgggtgagg tctgcacagt caccatccat actaaacacg gattccgtga ccacgataat
     6301 ccgctcaaaa gtgcgatcat ttttttgcaa aatttgttca aggtggacgt aatcatgatg
     6361 acgaaaacgc acaaactcac attgtgccaa gcgaatgcca tcaatcatac tggcatgtac
     6421 cagtttatcc gccacaatca gcgttttttt gtccgctaaa gcaggcaaaa tcccaatatt
     6481 agcatgataa ccgctattaa atagcaaggc agtttctcgt ccaaatgcct gcgccattaa
     6541 gctttctagc tcatcataaa tcggaaaaga gcctgttaat aaacgggagg aagaagaagt
     6601 caatgcaggg agttgatctt ggtattgcgt gaaaaatgcc tgacgcaagg cttcgttatt
     6661 ggctaaacct aaataatcat tggaggacat attcagcatc gtattgtcct cacgttgaat
     6721 aaaacgccct cggtgaatta gttggggcag ttggcgaaat tgattctgcg cctttaaatc
     6781 agctaactgc tgctgataat acctgatcat agagattcct tatgtgcata ttcttcttga
     6841 agggtgcgaa ttgtgccatg aattaattga gacaattgat ccgatgagat gatatacggt
     6901 ggcatcaaat acactaattt gccaaatgga cgcacccaaa cgccattttg cacaaagcgt
     6961 ggtggtaaac ttgccatatt gacaggcgcc ttcatttcaa tcaccccaat cgctccaagt
     7021 actctcattt cagcgacaca atctaaggct tccgcttggc gcaattcttg acgtaattgc
     7081 tgttcaatct gttgaatacg ttgttgccaa gggcttgcca ataacaattt gatactttct
     7141 gctgctaccg cacacgccag tggatttgcc ataaacgtcg gaccgtgcat aaaacatttt
     7201 gcctcgccag aacaaatcac gtctgctacc gcttggttgg taatggtagc ggatagagtt
     7261 aaataccccc ccgttaaagc tttaccgata cacatcacat ccggcacgac attggcatgt
     7321 tcacaagcaa ataatttgcc tgtacgccca aatcctgtgg caatttcatc aaaaatcagc
     7381 aaaatgccgt acggttcgca taaggctttt gcttgcacca aatactcagg ggaataaaaa
     7441 tacataccac ccgccccttg cactaccggt tctaaaatta aacccgcaat ctcatcacca
     7501 tgttgtgcca ataaatcctg taacggttgc atcgcttcgg gttgccaagc ttgcccaaat
     7561 tttaccgggg gttgcggtaa aaaatattgc acgggtagcc ctttggcaaa caagctgtgc
     7621 atgccggtca cgggatcaca cacggacatc gcatgccaag tatcaccatg atagcccgaa
     7681 cgaatcgtag caaatttata gcgctgtgtt tcgcctttag catgttgata ttgcactgcc
     7741 attttcatcg ccacttccac ggcgaccgaa ccactatcgg caaagaaaat tttatccaaa
     7801 ctttccggca agatgttgac cagttgctgc gccagttcta ccgctggttg gtgcgttaat
     7861 ccaccaaaca tcacatgact catttgactc agttgttgcg tggcagcgtg gtttaaacgg
     7921 gggtgattat agccatgaat cgctgaccac cacgatgaca tgccatcaat caactgctga
     7981 ccgtttttta actggatata cacaccttcg gcacgttcta ctgcaaataa gggaaaatcc
     8041 gcatttaacg ccgcataagg gtgccaaata tgttgtcgat cacattctaa aagttgctgc
     8101 tcattcatcg tttcacctcg gttgtgaatc gccctttcaa ctggcgtaaa ttcacgcaaa
     8161 tacttacata aacggaataa cttgttataa tcgccaagca tttggctttt caagcccatt
     8221 attctaactt aaaaagatga tttattacta tgaatatatt agaaaaaaaa gcacaactga
     8281 gttactggca acggattaaa attgcctttc aatatgtgat gccacaactt tatttaacac
     8341 gtcttgcagg ctggtttgca aaacagcaat ggggtgctgt cacacatttt gtgattaaat
     8401 tattcgcgaa aaaataccat gtggatatga gtgaagctgc aaaaccaaat ttcagcgact
     8461 atgcgagctt taatgaattt tttatccgtc cattagcgga caatgcccgt ccaattaatc
     8521 aaaatcctac cgcactttgt ttaccggcag atggtcgtat tagtcagtta ggacacattg
     8581 agcaggattt attgctacaa gccaaaggac attatttcag cttgaacgat ttgttagctg
     8641 gcgacgaggc gctcgctcat cattttaaag atggcgaatt tgccaccacc tacctctcac
     8701 cacgcgatta ccaccgtgtg catatgcctt gtgatgccac cttatgcaaa atgatttatg
     8761 tgccaggtga cttattctca gtcaatccat ttttagccga acacgtgcca aacttatttg
     8821 cacgtaatga acgcgtgatc tgcgtattcg ataccgaatt tggtaaaatg gtccaaattt
     8881 tagtcggcgc aaccattacc gcgagtatga gcaccgtgtg ggcaggtgtg atcaacccgc
     8941 ctcgtccaga aaaaatcacc acctggacct atgaaggaga aagtgcggtc aaattactga
     9001 aaggacaaga aatgggagcc tttcaattgg gctcgacggt gatcaattta tttgaaaaag
     9061 atcgtgtgca actggcatct catttacaag tggatagccc ggtacgtatg ggtgaaattc
     9121 ttgcccacca aaaataattt ttaaccacaa taggaaaaac aatgagtcaa caatttttcg
     9181 accaagtgtc attagaaagc caacttgaag tgagcgccga agccgtcgcg aaagggatct
     9241 ttgatgtgtt aaatcaaaat ccaccagcac ttgagttaaa tgaagtgagt catgccctac
     9301 agactttgca acaacaagcg aaattcaaag aaattgaagc cgttggtgca caattcttag
     9361 ctgaaaacgc gcaaaaagcg ggggtaaata ctacggaatc tggtttacag tatgaagtgt
     9421 tagtggctgg tgaagggcaa attccggcac gcgaagacaa agtgcgtgtg cattacactg
     9481 ggacattaat cgacggtacc gtctttgaca gctcagtaaa acgtggtcaa cctgcagaat
     9541 tcccagtaaa tggcgtgatc gctggttgga ttgaagcctt gtccatgatg ccagtgggtt
     9601 caaaatggcg tttaaccatt cctcacaacc tcgcttatgg cgaacgtggt gctggtgcct
     9661 ccattccgcc attcagtacc ttagtgtttg aagtcgaatt attagccatt ctttaaagct
     9721 aaacgctaga cataaaaaag tgcggtcatt ttccgcactt ttttatgtct agcgtttatc
     9781 gtttcaagcc ttgctgatag ccgctgttcc acgaatggcg gaacttgtcc ggcacagcct
     9841 tgcccgtttg ttcttcacag taagccgttc gttgaatcaa cattttttgt tggtgttctc
     9901 gaaatgattt tcccacacga tagccgtcca aataccaatc atcattatct tgacatgcca
     9961 tggtattaat ccgttttgta ttccccgtca ctgcaaaaga tttgcctgcc tcaatacgtt
    10021 gcaccgcatg ttcagagtat gaagcacagc tcaccagcga acctagtaca ctgaatatca
    10081 atactgcttt ccaattcatc ttgttacctt tctttttctg atttataaca caatcatatc
    10141 gtctcggtgt accgcaaccg ccccatattc ataaccgaga acctgttcga tatcttgcga
    10201 atgtttgcct tgaattaaat ggagcgcatc gctgttataa cgtggcatcc ctaaggcaac
    10261 atccttgcct tgctgagtac gaatttttac cacttcaccg cgtgaaaagc gcccttccac
    10321 gtttacaatc ccagcaggca ataacgattt atgttgtatt aacatcgcgt tttccgcccc
    10381 cgcatcaatg gtaataatac cggctgacgg cgccgcatat agccattgtt tacgactttc
    10441 taagcgatct gcttgcacac taaatttggt gccaatggct tgcccataag ctaagtccac
    10501 aatcacattc gggcgattac ccggtgcaat aatggtttca atgccggagc gggttgccac
    10561 atccgcggca ctgattttgg tggacatgcc acctgtgcct aacgaggtgc cacttccgcc
    10621 cgcaatcgcg cgaatatgat cggtaatttt gtccacgtcg gcgatcaatt tggcgtctgg
    10681 atgtttgcgc ggatcacgat caaataaacc ttgctgatca gtaagcaaat acaactgttc
    10741 tgcttgcacc aaaattgcca ctaacgcgga taaattatcg ttatcgccta ctttaatttc
    10801 tgacgtagcg acagcgtcat tttcattaat cactggaata atctgattgt ctaataaggc
    10861 gcgcaaagta tctctggcat ttaaaaaacg ttcacgatct tcaatgtcgg cacgggtcaa
    10921 taaaatctgc ccaatatgaa tatcataaat ggcaaacaat ttttcccacg tttgaatgag
    10981 ctgactttgt cctaccgcag ccaataattg tttcgaggca atcgtcggtg gcaattgcgg
    11041 gtgatttaaa taatgacgac ctgccgcaat cgcccctgag gtaacaatca ctaaacgaaa
    11101 gcccgcttga tgaagctgtg cgagctgacg cacaatatct atcatatgag gtaaatttaa
    11161 cttcgccgat ccttgcgtaa gcgtactggt tccaaatttt acaacgagtg ttttgtcgat
    11221 tttcatcttc tctatcttct tatttttgtc gcacaaaatt gaagctaact taccattaat
    11281 catcagaaaa atcatctcgt ttacttgcta ttttctatga tttagcacaa attttttctc
    11341 actaaaaggc atataataaa gtttcttgat ttttcagcta ggaacccgat tatgacctca
    11401 acctcttcac aagaaacgga gcggcaacga gaaatcactc gcctttgtgt tcaagttgcc
    11461 caactcttat acaacatggt gcagaaagtg ccatcgttgt gcaaatggca catcgcttag
    11521 gcttagccct cggtgtagat agcgtagaat gtgccctcac gccaaatgcc attattctta
    11581 ctacattagc ccaagaccat tgcatcacga cagtccgtaa aaaccaagac aaaggaatta
    11641 atatgcaagt ggttaccgaa gtgcaacgta ttgtgattac agcagaacgt aaaatctatg
    11701 atatgcaaca agtgcatgcc aaactggctc gcattaaacc gcttaaatac aatcgctatt
    11761 ttgtgatgtt gatgattggc gtatcctgtg ccagttttgc tcatttatct ggtggggacg
    11821 cactagtttc attggttaca tttctcgccg caacactcgc catgtatgtt cgccaatcac
    11881 ttgccgcaag acactataac cccttaattg tatttgcggt gaccgccttt gtcgcctcac
    11941 taattgcggg tatcgcgttg aaatataaca tcggcaatca gccccaaatt gccttggcat
    12001 ccagcgtatt attgctcgtt cccggctttc cactgattaa tgcactcgcc gatattttaa
    12061 aagggcatat caatatgggg attgcccgtt gggcactcgc gacaatcctc acatttgggg
    12121 catgcttagg cattgtattt gcgctgagtt tattcttaga ggaaatctgt atgctaaata
    12181 aattcattca agatgaattt ctacggctag atcaacgtta tgcagcttgg tatcaaagtg
    12241 aagaaacgga tgaagttgcc agaatgggga ttcaagaaag tgagcggatt ttgaaaattc
    12301 tgtatgcact gaaatataac gaagacccta tgcaaaatgg tttaggctat attgcattta
    12361 tggcatcaaa aggccaataa tttacttatc tcaacaattt acccaccggg gaaactcctc
    12421 gatggcgttt cccctacttt ataggagaaa cgctatgact attaacactt atgcaaaatt
    12481 tgcacctacc gtttttgttg caaaatgctc tgaatcacat accaaaggtg aaattattac
    12541 gctaaccagc aaatatggta atgaaaccga ggttcaagta cataatcttg ttaaacaaga
    12601 tggcgagcat tatttttatt catttactcg ttgtgatggg atggatagtc agtcatttgc
    12661 tcaacaaaaa gcagaacgct atcaaggcta tgcagataat gcagccaaac gtagtcaaga
    12721 ttgggtaaat gccgctaatg aggggtgtga ttttttgagt ttaggtgagc caataaaaat
    12781 tggtcatcac agcgaaaaga gacaccgtaa ccttattgaa cgtaatgctc gccgtatgga
    12841 caatgcggtt gcagaaatga acaaagctgc aagttatgaa tctcgtatcg catattggga
    12901 aaaaatggca ggaaaaattg acctgtctat gccggaaagt ctggaatact ttaagtttga
    12961 attggataaa gccaaaacaa agcacaaaga attgaaggac aaccccgaga aacgagagca
    13021 tggttattca ctgacttatg ctaaaaaagc agttaatgaa cttgagaaaa aagtaaaatt
    13081 agctgaatta ctttgggcat aattatttac aaaggagatg acgatatgaa tcgacaaggt
    13141 atttatatta atggcaaaca ggtgtttgat tcacaaggcg aagatattca aagcattgga
    13201 ttttttggct gcaatattca aacggtcgta ggcataaaca aaggaagtat tttagtctcg
    13261 tccaatagta atcaattatt ggtgaatgga cagtcgattg aattaggttc tgagccagtc
    13321 ctcaaaattg aggttttggg caatgtgcag aaactgagtg ccggtgccgc agatgtctct
    13381 attacaggag atgccggcag tgttgacaca gttagcggtg atgtctctat taagggaaat
    13441 gttgcctctt atgtgaaaac cgtgagtggt gatgttcgct gtcgtgctat taccggttcg
    13501 gtggaaaccg tctccggtga tatttatcgc tgatatttac tcatcttatt atttaccacc
    13561 ctattgggaa gcaattttcc caaggtgggc agattgtttc ccatttttat tttgaatttg
    13621 gagaaacatg atgaccacta ttaacctttc acaacaagaa cgtgagttag ttgaatttgt
    13681 ctggaataac cgtaatacac cttggttttt tcactgtagt gtatcgaatg tgtcgagaaa
    13741 taatacctct cggcaaattg ctgtatgtgt cattaaggat aatcaattga ttagccttga
    13801 tgaattgata gcaaaattat gtggttataa actcagacaa aacggattat acgttactgt
    13861 tcataatatg gatgctgttt ttgatacctt atatcgcttt atgtgcaagc taaatgatga
    13921 gatggaggca aatgaaaatg tttgccctta tttatcatta gctcactatg aagtgttttg
    13981 attggtatca gaactatcca ccctgtcggg aaacaatttt tccgataggg cagattgttt
    14041 cccactttta ttttgaattt ggagaaacat aatgatagac accttttttg accttgacga
    14101 cacctcatgc tatttaggta actgggagga tatactgaaa gaatatgatg attgtctttc
    14161 agttgaagat ttttggcatt ccgctaaaga atttgatacc gtacctcatt ttggcaacct
    14221 ataccaggag cgtgtcatcc ttaagttgat tgctcgattc tgtattgagc tgaatattga
//
LOCUS       DANLXD010000068        14048 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.068, whole genome shotgun sequence.
ACCESSION   DANLXD010000068 DANLXD010000000
VERSION     DANLXD010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14048)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14048)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14048
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.068"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..633)
                     /locus_tag="PXD18_001692"
     CDS             complement(<1..633)
                     /locus_tag="PXD18_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HDL6302107.1"
                     /translation="MAEGLLLTPYFQTEVGIVFYKVPKDVSPAAFGERTLLQPAPTDL
                     ATVKSGKVANFSANSTACKELAVFAKSAKVRSTLNQRDKYSNDLPYIRFVKSIQTCQC
                     RDGKYCHTEKVLVENKNGAVQLCWHHDKMRMDGEIPNEKLEALADENWEKFIAQQIRL
                     TLRKTQSTAIEFADLVLFASIKGLLDELDSKALQQFLGYPPLNNSGVSKES"
     gene            complement(760..1353)
                     /locus_tag="PXD18_001693"
     CDS             complement(760..1353)
                     /locus_tag="PXD18_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL6302108.1"
                     /translation="MTDFDKNTYQTPNYVRNWLNHRYAWFHIDGCSNGQNTLYTYWIG
                     RAADGLDDDKLSCQIADDFLADDLFDVLLDKVSDWGELLRIFVNPPYSDPLPFVQRAA
                     ELKKAGHLVVMLLPADKTTEWYTIIQQHANEVIDIIGYHDEKGTWRTGRIQFINPVTG
                     KPAQGNNKGSMIVVFDPFIEGIVTRQMPLDKIKEWGK"
     gene            complement(1364..2410)
                     /locus_tag="PXD18_001694"
     CDS             complement(1364..2410)
                     /locus_tag="PXD18_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conserved phage C-terminal domain-containing
                     protein"
                     /protein_id="HDL6302109.1"
                     /translation="MRFTSTINNVRLVEWEINITQGALVDLINQASSWAKAVVIDGIT
                     YYWMSFSKVCEELPAVFSKEDTVYRQYKVLKEKGIIDHFKMDGKDYVRLTEKGCEWNK
                     FEPIRESEKNPSIGNNSEQTRKNFRESSEKNPTDNNTNYKNNNDHTTPLNPPAGEPAP
                     AEVVLNYLNSALVTLAVQLGERKPVGYSLKPWAKNITARIRESSVADCCQVVDYLVAK
                     WGRDEKMREYLCPKTIFRQSNFADYFPKSTAWANNGKPVCVNGKWVTPAELEKRLIMP
                     TVDEVRALFQKSLSGNPFKALDFTNKRNLVMYHATINTRNKRPLERDLPMIISQEIKN
                     AVERIDRLRVPTFS"
     gene            complement(2407..3090)
                     /locus_tag="PXD18_001695"
     CDS             complement(2407..3090)
                     /locus_tag="PXD18_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage regulatory protein/antirepressor Ant"
                     /protein_id="HDL6302110.1"
                     /translation="MNQLLNISAPKASITMSSREIAELCEKEHRHVTRDIEAMFSQLD
                     IPAEGYAHFWTHPQNGQTYREFRLPYDLTLTLISGYSVILRKKIIDRWQELESRQGIP
                     QSFSQALRLAAEQQEVIEQQNHQLAIQAPKVAFVEHYVEVGTTKSLRETAKILNFPEK
                     RLIECLERYRVLYRQSGNLLPYQDKQAKQLFAVKTGTAEHGHNFTQTRVTAKGIEWIA
                     QRYASELGQ"
     gene            complement(3148..3336)
                     /locus_tag="PXD18_001696"
     CDS             complement(3148..3336)
                     /locus_tag="PXD18_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cro/Cl family transcriptional regulator"
                     /protein_id="HDL6302111.1"
                     /translation="MKKDDVLEHFGTLEKVAATLGISVSAVSQWGEIIPEKNAYRLQE
                     ITAGKLKVKHSLYRNRSK"
     gene            3461..4117
                     /locus_tag="PXD18_001697"
     CDS             3461..4117
                     /locus_tag="PXD18_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6302112.1"
                     /translation="MNTQTLGDRIKSRRKELKLTQKDLATALKGVSHVAVSQWESSTT
                     KPNSENILDLSTVLQCDISWLLRGNGESNVLPASLGMTKVPLISYIQAGQWTGIDDFR
                     ETCGDYEYILTDLEVSEDAFALEIKGDSMEPDFIEGDRVIIDPDVQPHAGEFVAAING
                     DYEATFKKYRPLEDLDEYGRQHFELIALNPDYHKLSTLKQEIRIIGTMVEHRIYRRKR
                     "
     gene            4129..4503
                     /locus_tag="PXD18_001698"
     CDS             4129..4503
                     /locus_tag="PXD18_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302113.1"
                     /translation="MTEFKDVKQAIVEAQLASTPKDKVVNDIMKGSAELLSANDIINR
                     LGIGADEFQELVNLPNHYLRINGGLGAAVYNTRRMFDTHVELVNQELEKNISFPKPDL
                     YILGKARWKKETFKKWLEEQCR"
     gene            4655..5392
                     /locus_tag="PXD18_001699"
     CDS             4655..5392
                     /locus_tag="PXD18_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HDL6302114.1"
                     /translation="MLSKQVLSISESRLSTYLFCFFRNDPTKQKEAIAIYTALQHRTG
                     IYFSLIQEIEVALRNEVSQLLRFAAPNHNLYEFFHFLANDSNAPLNAESKRQLQKAIS
                     ECGRNYNENDIISHISFGFWVNLFNYDIKRNQYVAYWQSVLKPIFGHRFSNFKDLYNT
                     LKQIMRFRNRLYHQEVVWNKRIAKKPTHALENLEKTYKQFELALQKIAPERFAFRQLS
                     QALIWQRQIFFDQQIFEAEIVILPQHI"
     gene            complement(5428..6024)
                     /locus_tag="PXD18_001700"
     CDS             complement(5428..6024)
                     /locus_tag="PXD18_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302115.1"
                     /translation="MKKLLMTLCCLPAFALANETGESCSKIEDSAKRLECYDSVFVKK
                     DTGKDEATDEKSNWEYEQKKDELRNATTYFAKIRSTNTIDFGFPYNSSSMNLMLRKDP
                     KYGNDVIFSVHGQFNGCMIESCKITVKFDDGKLESYRMIGADGGSNDTLFIENAKAMK
                     TFVDKLKKSKKLIVEASFYNYGKGQFTFDTQGLEWKHF"
     gene            6670..6855
                     /locus_tag="PXD18_001701"
     CDS             6670..6855
                     /locus_tag="PXD18_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302116.1"
                     /translation="MNKMKQLAPFALLILLLGIVGRMDYDDHIQMQRYKCERNQGFWQ
                     MESNGNQYCGGKYGTKN"
     gene            6839..7036
                     /locus_tag="PXD18_001702"
     CDS             6839..7036
                     /locus_tag="PXD18_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302117.1"
                     /translation="MARKIDAGVEIVEVDKRFIAKFFYDGKLQHTTYPQYNRQNAIML
                     INRKIERFNIGRDKPIKLYKE"
     gene            7039..8013
                     /gene="ssb"
                     /locus_tag="PXD18_001703"
     CDS             7039..8013
                     /gene="ssb"
                     /locus_tag="PXD18_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL6302118.1"
                     /translation="MAGINKVIIVGRLGNDPELRTMPNGDSVAKISVATSTEWTDKTS
                     GEKKQATEWHSIIAFRNLADIIGKYLKKGSQVYVEGKLRTRKWQAQDGTDRWTTEIIA
                     DQLQMLGSSNSGNSNNNWATEPAGNPPPTNPYNHVMTDSESRDFDDDIRVRWITKEQA
                     KQFINNISTDWMKTICSFALLTGARRTEILSMTWDKIDFIRKVAIVSNDIAKSEKARS
                     LLLNDDAIELLQKQRGKNPKYVFVGSKGQALQDINRKIFNKATEKCLLVDFHFHDLRH
                     TWASWHVQAGTPLFTLKELGGWETLEMVKKYAHLNADHLLNHANSVKF"
     gene            complement(8100..8176)
                     /locus_tag="PXD18_001704"
     tRNA            complement(8100..8176)
                     /locus_tag="PXD18_001704"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8140..8142),aa:Arg,seq:tct)
     gene            complement(8201..8277)
                     /locus_tag="PXD18_001705"
     tRNA            complement(8201..8277)
                     /locus_tag="PXD18_001705"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8241..8243),aa:Pro,seq:tgg)
     gene            8447..9307
                     /gene="folD"
                     /locus_tag="PXD18_001706"
     CDS             8447..9307
                     /gene="folD"
                     /locus_tag="PXD18_001706"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HDL6302119.1"
                     /translation="MTAQIISGSEVSSQIKKKVSEKIAHYLEQGKRNPGLAVILVGND
                     PASQVYVGSKRKSCAEIGIASKSYDLPEETTEAELLALIEKLNQDDSVDGILVQLPLP
                     KQIDSTKVIEAILPHKDVDGFHPYNVGRLSQRIPTLRPCTPYGVMKLLETTGVDLYGQ
                     HAVIVGASNIVGRPMALELLLGGCTVTVTHRFTKDLEHHVRQADILVVAVGKPEFIPG
                     EWVKDGAIVIDVGINRGADGKLKGDVEYSVASQKAAFITPVPGGVGPMTVAMLMQNTL
                     QTYENHLQAV"
     gene            9421..10872
                     /gene="thiI"
                     /locus_tag="PXD18_001707"
     CDS             9421..10872
                     /gene="thiI"
                     /locus_tag="PXD18_001707"
                     /EC_number="2.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HDL6302120.1"
                     /translation="MKFIIKLFPEIMIKSDSVRKRFIKILTSNIRNVLLKETENVSVV
                     RHWDFIEVRAKVDEETALVLDLLKRTPGIHHILEVEETPFTDMHDIFEQTYAAVKAEL
                     EGKTFSVRVRRKGKHDFRSLDVERYVGGGLNQRIETAKVKLTNPDVTVRIDIEHDKML
                     LIKARHEGLGGYPIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGGAAHEI
                     GVKQMAYHIWSRYSTSHKVRFIAINFENVVGEILEKVDNGQMGVVLKRMMVRAASRIA
                     ERFDIQAIVTGEALGQVSSQTLTNLRLIDKASDTLVLRPLITHDKEQIIAMAKAIGTD
                     DIAKSMPEFCGVISKNPTVKAIETKILEEEGNFNFEVLEQAVQTASYLDIREIAQQTE
                     KEVVSVETTTELSKNDVVLDIRSPEEVDEKPFRLDGVEVKELPFYKLSSQFSTLDQSK
                     TYLLYCQRGVMSKLQALYLKENGYSNVKVFRVK"
     gene            complement(10917..11624)
                     /locus_tag="PXD18_001708"
     CDS             complement(10917..11624)
                     /locus_tag="PXD18_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YwiC-like family protein"
                     /protein_id="HDL6302121.1"
                     /translation="MFKEKPVISNQHGALAMAMLPFLYAVIESGFSTLHIFFGLSWLF
                     LYFFSYPFLSLFSKKPTERNKKWAKIYFGLSILFALPLIYAQPSILQFLPIILPLGLV
                     QVHYAKQKDERNLWNDIAGILTFGIMGMAAYYLVTKQYQFEILLHPTLFFIATTFYIK
                     SMVRERRNPIYMEISIAIHLVLAMLYILCSLQAVFFAYLIATARAIIVPSFGWNVKQV
                     GMLEFPVILLFLASLIW"
     gene            complement(11692..12666)
                     /gene="pfkA"
                     /locus_tag="PXD18_001709"
     CDS             complement(11692..12666)
                     /gene="pfkA"
                     /locus_tag="PXD18_001709"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HDL6302122.1"
                     /translation="MSKKIKKIAVLTSGGDAPGMNAAIRGVVRTALNEGLEVCGIQDG
                     YYGLYHDKVIPLDRRSVSETINRGGTFLGSARFPDFKRPEVRKHCVETLKKYSIDALV
                     VIGGDGSYMGAKLLTEEFGYPCIGIPGTIDNDIVGTDYTIGYQTALETALDAIDRLRD
                     TSSSHQRISIVEIMGRHCGDLTLSAALAGGCEYVIVPEKGLDKDALMRSIEEGFHKGK
                     RHSIIAITELMTDVHALAKEIEARFGNETRATVLGHIQRGGSPCAFDRILASRMGVYA
                     VELLLQGFGGHCVGIQNEQLVHHDIIDAINNMRRPFKEELFEASRKLF"
     gene            complement(12773..13969)
                     /locus_tag="PXD18_001710"
     CDS             complement(12773..13969)
                     /locus_tag="PXD18_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HDL6302123.1"
                     /translation="MLNTQFRTHFPFFEKSDGWTYLDSAATTLKPDVLIEATSEFYAS
                     AGSVHRSQYDLPQTEQYELARDLVAKRFNVETREAVIWTSGTTQSINTVAYGLEHQIA
                     AGDEIVISVAEHHANFIPWQQLAQRTRAKLVVLPLNDKYEIELETLKNALSEKTKIVA
                     FNLVSNVTGVRQPAEQIIPLIRQSCSAKIVLDIAQAVCSEQVDVQKLDADFYAFSAHK
                     MYGPNGVGVLTGKLQSLEQIQPLVFGGKMLKNITESELTVAELPYRLEAGTPNIAGII
                     GFGQVLAWLEKWDFVALNHQLYDLAEYTCKRLNSYQNLQIIGQQNTPTISFVVKNQHP
                     ADIAAFLTQSKIAIRQGEHCAKPYLRHLEEVGTVRLSLAHYNNQQDVEHFFNALDFTL
                     EILQES"
BASE COUNT         4272 a         2791 c         2847 g         4138 t
ORIGIN      
        1 actttctttg ctcacaccgc tattattcag tggtggatag ccgagaaact gctgtaatgc
       61 cttgctgtct aattcatcaa gcaaaccttt gatactcgca aacaacacta agtccgcaaa
      121 ttcaatagcg gtagattgcg ttttgcgtaa ggttaagcgg atttgttggg cgataaattt
      181 ttcccagttt tcatccgcta gtgcttctaa tttttcattc gggatttcac cgtccattcg
      241 cattttgtcg tgatgccaac aaagctgtac cgcaccgttt ttattctcta ccagcacttt
      301 ttccgtgtgg caatatttgc catctcggca ttggcacgtc tgaattgact ttacaaaccg
      361 gatataaggc aaatcattac tatatttgtc acgctgattt agcgttgaac gaacttttgc
      421 cgatttagca aacaccgcca gctctttaca agcggtcgaa tttgccgaaa aatttgcaac
      481 cttgcctgat ttaaccgtcg ctaaatcggt cggtgcaggt tgcaacaaag ttcgctcacc
      541 gaaagcagca ggagaaacat ctttaggcac tttgtaaaac acaataccca cttcggtttg
      601 aaagtaaggg gtaagtagca aaccttccgc cattattgcc cccatttctc ggtttcatca
      661 taggctttca cgaatagcat aaatacgcca atacagatta aaaaaatcag tacgccaatt
      721 actgcaccaa taccaataaa tagttcccaa taatccattt tatttacccc attccttgat
      781 tttatctagt ggcatctgac gagttacaat gccctcaata aatgggtcaa acacaacaat
      841 catcgagcct ttattattac cttgtgccgg tttacctgtt accgggttga taaattgaat
      901 ccgccctgtc cgccaagtgc ctttttcatc gtgatagcca ataatatcaa ttacctcatt
      961 agcgtgttgt tgaatgatgg tgtaccattc tgttgtttta tccgctggta ataacatcac
     1021 aaccaaatga cctgcttttt tcaattctgc cgctcgttga acaaaaggca gtggatcaga
     1081 atatggcgga ttaacgaaaa tacgcagtaa ttctccccag tctgaaactt tatctagtag
     1141 cacatcaaat aaatcatcgg ctaaaaaatc atcggcaatt tggcaactta atttatcatc
     1201 atctaaaccg tctgccgctc taccaatcca ataggtgtac aacgtatttt gtccgttaga
     1261 gcaaccgtca atatgaaacc aagcataacg atgatttagc caattacgca cataattagg
     1321 tgtttggtaa gtgtttttat caaaatctgt cattgtctaa tccttacgaa aatgttggta
     1381 ctctcaaacg gtcgatacgc tcaaccgcat ttttaatttc ttggctgata atcatcggca
     1441 aatcacgttc aagtggtcgc ttgtttctgg tgttgattgt ggcgtggtac atcactaaat
     1501 ttcgtttgtt ggtaaagtcc aatgccttaa acggattgcc actgagtgat ttctggaaca
     1561 aggctcgtac ttcgtccacc gttggcataa tcaagcgttt ttccagctcc gccggtgtaa
     1621 cccacttacc atttacgcaa acaggctttc cgttattagc ccaagcggtc gattttggaa
     1681 aataatctgc aaaattcgat tggcggaaaa tcgttttcgg gcagaggtat tcacgcattt
     1741 tttcatctcg tccccattta gcgacaaggt aatccaccac ttggcaacag tccgccaccg
     1801 aactttcacg aatgcgagca gtaatatttt ttgcccacgg cttgagcgaa taccccacag
     1861 gcttacgctc accaagctgt accgccaacg ttaccaaagc cgaattgaga taattcaaca
     1921 caacttcagc cggggcaggt tcccccgctg ggggattaag gggggtagta tgatcattat
     1981 tatttttata attagtatta ttatctgtcg gatttttttc cgagctttct cggaaatttt
     2041 tccgagtttg ttcggagtta tttccgatac tcggattttt ttccgactca cggatcggct
     2101 cgaatttatt ccattcacaa cctttttcgg ttaaacggac ataatcttta ccgtccattt
     2161 tgaagtggtc gataatgcct ttttctttca acaccttata ttggcggtaa actgtatctt
     2221 ctttgctaaa aaccgcaggt aactcttcgc aaaccttgct aaatgacatc cagtaatagg
     2281 ttatgccgtc aataaccacc gctttcgccc aactggaggc ttgattgatt aaatcgacca
     2341 atgccccttg tgtaatattg atttcccatt ccactaagcg gacattgttt atggttgatg
     2401 taaatctcat tgtcctaact ccgatgcgta acgttgagca atccattcaa tccctttggc
     2461 ggttactctc gtttgggtaa aattatgacc gtgttctgcc gtgccggttt ttactgcaaa
     2521 aagctgttta gcttgtttat cttgataagg gagtaggttt cctgattggc gataaagaac
     2581 tcgatatcgt tctaaacatt caatcaaccg cttttctgga aaattgagta tcttggcggt
     2641 ttctcgcaat gatttagtcg ttcccacctc aacataatgc tccacaaatg cgactttcgg
     2701 ggcttgaatg gctaattgat gattctgctg ctcaatcact tcttgctgtt ctgccgccaa
     2761 ccgtagagct tgagagaaag attgtggaat accttgtctg ctttctagct cttgccaacg
     2821 gtcgataatt ttcttgcgaa gtatcacgct atagccggaa attagggtaa gggttaaatc
     2881 gtaaggcaat cgaaattccc ggtatgtttg cccattttga gggtgtgtcc aaaaatgggc
     2941 atacccctcg gcaggaatat ctaattgact aaacatcgct tctatatcac gagtaacgtg
     3001 tcgatgttct ttttcgcaca actcagcaat ctcacgacta ctcatcgtaa tgcttgcttt
     3061 tggtgccgaa atgtttaata attgattcat cgaaaatacc tttcgtgttt aattatgtat
     3121 gaaagccacc gttacagcgg tggtttttta tttgcttcta tttctataaa gtgagtgttt
     3181 gacctttaac ttgccggcag tgatctcttg taatctgtac gcatttttct caggaataat
     3241 ctcgccccat tgagaaacag cagatacact aatccctaaa gttgccgcca ctttttctag
     3301 agttccgaaa tgttcgagca catcatcttt tttcatattt tcttaattcc tttcttgaat
     3361 tttatttaag acctcttaaa tatacaatta aaggaaactt aagtcaataa atgttaagat
     3421 aacttaacag caactttatt tttaccttta aggggatact atgaatactc agaccttggg
     3481 cgatagaatt aaaagccgta gaaaagaatt aaaattgaca cagaaagatc ttgctactgc
     3541 gttaaaaggg gtctcacacg ttgcagtatc tcaatgggaa agtagtacga ctaagccaaa
     3601 ttcagagaat attttggatt tatctacagt attgcaatgc gatattagtt ggctcttgcg
     3661 tggtaatgga gagtctaatg ttctacctgc tagcctcggt atgactaaag tcccattaat
     3721 tagctatatt caagccggac aatggacggg aattgacgat tttcgtgaaa cctgtgggga
     3781 ttatgaatat atcctaactg atcttgaggt gtctgaagat gcttttgccc tagaaatcaa
     3841 aggggactcg atggagcctg attttattga aggagaccga gtaattattg atcctgatgt
     3901 acaacctcac gccggtgagt ttgtggcagc aattaatggc gattatgaag ccactttcaa
     3961 aaaataccgt ccgttagaag acttagacga atacggaaga caacattttg agcttatcgc
     4021 tcttaatccg gattaccata aattatcaac gctaaagcaa gaaatcagaa ttatcggcac
     4081 aatggtagag catcgtattt atcgtagaaa gagataggaa ttgataatat gacagaattt
     4141 aaagatgtaa aacaggcgat tgtagaagct caattagctt cgacacctaa agataaagtc
     4201 gttaatgaca taatgaaagg aagtgcggaa ctgctttcag caaatgatat tatcaatagg
     4261 ttaggtattg gggcagatga gtttcaagag ttggttaatt tacctaacca ttatttgcgt
     4321 ataaatggag ggttaggtgc tgctgtgtat aatacaagaa gaatgtttga tacccatgtt
     4381 gagttagtca atcaagagtt agaaaagaat atttcatttc ctaaacctga tttatatatt
     4441 ttggggaaag ctcgttggaa aaaagaaaca tttaagaaat ggttggaaga acagtgtaga
     4501 taaagaaaag gtaggttaaa aaacctacct tttctgaacc gcaaataagc gattctcaca
     4561 ctttacaaag caatccagct cctacgtctg gggcttcggg tccgttgcca gtgcaagtat
     4621 tattacatta aactaaactt gagtaaagga aaatatgttg tccaaacaag tgctaagtat
     4681 ttcagaaagt cggctgagta catatttatt ttgctttttc cgaaatgatc ccacaaaaca
     4741 gaaagaagct attgcaattt ataccgcctt gcaacatcga acaggaattt atttttcatt
     4801 gattcaagaa atagaggtgg cactaagaaa tgaagtcagc cagttgttac gctttgctgc
     4861 acctaatcat aatttatacg aattctttca ttttctagcg aacgatagta atgctcctct
     4921 taatgcagaa tctaaacgcc agctacaaaa agccattagt gaatgcggac gtaactataa
     4981 tgaaaatgac ataatttctc atatttcttt tggattttgg gtaaatctgt ttaattatga
     5041 tataaagcgt aatcaatatg ttgcttactg gcaaagcgta ttaaagccta tttttggaca
     5101 tagatttagt aattttaagg atttatacaa tacattaaag caaattatgc gttttagaaa
     5161 tcggctgtat catcaagaag tggtttggaa taagcgaatt gccaagaaac caacgcacgc
     5221 actagagaat ttagaaaaaa cttacaagca atttgagtta gcactacaaa agatagcacc
     5281 tgaacgattt gcgtttcgtc agctttcaca agcacttatt tggcaacgcc aaatcttttt
     5341 cgaccaacaa atttttgaag ctgaaatcgt tattttgccc caacatatct aagcaaaaag
     5401 ctacgcatct atgtagcttt ttcttaatta aaaatgtttc cactctaacc cttgtgtatc
     5461 aaaggtaaat tgccctttgc cataattgta aaaactcgcc tctacaatta gttttttcga
     5521 ctttttcaac ttatctacaa aggttttcat tgcttttgca ttttcaatga aaagcgtatc
     5581 attgctgcca ccatccgccc caatcattcg ataactttcc aatttaccat catcaaactt
     5641 cacagtaatt ttacagctct caatcataca gccattaaat tgaccgtgta cgctaaaaat
     5701 tacatcattg ccatatttag ggtctttgcg taacattaaa ttcattgatg atgaattata
     5761 cgggaaacca aaatctattg tgttagttga tctaatttta gcaaagtaag tcgttgcatt
     5821 acgcaattca tctttctttt gttcatattc ccaattagac ttttcatcgg tagcttcatc
     5881 tttaccagta tcttttttca caaagacact atcataacat tctaagcgtt ttgcactatc
     5941 ttcaatctta gagcaacttt ctccagtttc gttagctaaa gcaaaagcgg gcaaacaaca
     6001 taaagtcatc agtagttttt tcatataacc tccatagaaa tcccttctta ttttctcaaa
     6061 agcgtggttt tcggtctgtg atcaagctcg caatctcaat aattatattt taatggttta
     6121 aaaaacaatc aattaagaaa tcataactaa ttgaaattta agaaatctta aaaatactta
     6181 ttaaataagc ttaaattttg attgacttgt aatttaagtt ttcttaaact taattcatca
     6241 aaacgagcta cggctcaatg ctctttaaca attcggtgct tgtgcggacg atattaacaa
     6301 cctcgggcag ttgtaaagta atgctttata actcagtaag gttggttaga ccctgacata
     6361 caaatttgaa cgacttgcca aaaagaggtg gcaaggttta ggcaacacac tcgcaaggtg
     6421 tggagagctg aaaaggcaac actggtatca gtcctaagca atcacgctta tctcaagttt
     6481 gagtaagtac ggatacaagc agcacccgac ggaatggcga aagccgggcg ggcgacggcg
     6541 tgggcagaca cgcatttatt ccaaagctca tttcaccaag tgtgtttcgg aatacccaca
     6601 actagacgca agtcgctcca tttgcccacc gtaaaacgtg ggcttttttt aaccctaaag
     6661 gacaatccta tgaacaaaat gaaacaactt gccccatttg ccttgctaat tttgctatta
     6721 ggcattgtcg ggcgaatgga ttatgacgac cacatacaaa tgcaacgtta caaatgcgaa
     6781 cgaaatcaag gcttttggca aatggaaagc aacggcaacc aatactgcgg agggaaatat
     6841 ggcacgaaaa attgatgccg gtgttgagat tgttgaggta gataaacgat ttatcgccaa
     6901 gtttttttat gacggcaaat tacagcacac aacctatcca caatacaacc gccaaaacgc
     6961 aattatgttg attaaccgca aaattgagcg gttcaacatt ggcagagaca aaccaatcaa
     7021 actttataag gaataacaat ggcaggaatt aacaaagtga ttattgtcgg tcgcctaggt
     7081 aacgacccgg aactacgaac aatgccaaat ggcgattcag tcgccaaaat cagtgtagca
     7141 acttcaaccg aatggacgga taaaacctca ggcgagaaaa aacaagccac agagtggcat
     7201 agcattatcg cctttcggaa tttagctgac attatcggca aatacctgaa aaaaggctcg
     7261 caagtgtatg tggaaggcaa gctacgcact cgcaaatggc aagcccaaga cggcacagac
     7321 cgctggacga ccgaaatcat cgccgatcag ctacaaatgc tcggtagctc aaacagcgga
     7381 aacagcaata ataattgggc aaccgaaccg gcaggaaacc caccaccaac caatccatat
     7441 aaccacgtaa tgacggattc agaatcacga gattttgatg atgatatccg ggttcgttgg
     7501 attaccaaag aacaagccaa gcagtttatt aataatatta gtactgattg gatgaaaact
     7561 atctgctctt ttgctttatt aacaggagca aggcgaacag aaatactttc tatgacttgg
     7621 gataaaatag attttatccg taaagtagcg attgtttcga atgatattgc caaatctgaa
     7681 aaagcgagat cgcttttact taatgatgat gcaattgaat tattacaaaa gcagagaggg
     7741 aaaaatccta aatatgtttt tgtaggaagc aaagggcagg cattacaaga tattaaccgc
     7801 aaaatattta acaaagcgac tgaaaaatgt ttattggttg atttccattt ccatgattta
     7861 aggcatactt gggccagttg gcacgttcag gccggcacac cattatttac cttaaaagaa
     7921 ttgggtggct gggaaacatt agagatggta aagaaatatg cccatcttaa tgcagaccat
     7981 ttactcaacc acgctaactc agttaaattc tagtcacaaa ttagtcacaa agtatttttg
     8041 acataggaaa ttaataactg atatttaaat gtaactattt gaaatataag ggtaattaat
     8101 ggcacgccct aaaggattcg aacctttgac ccacgcctta gaagggcgtt gctctatcca
     8161 gctgagctaa gggcgcagat gaagataata taaaaagaag tggtcggcga gataggattt
     8221 gaacctacga cccactggtc ccaaaccagt tgcgctacca agctgcgcta ctcgccgaca
     8281 taagatgttg ttgattatag atttctttgc acaacagtca atcttttttt gtgaatgtcg
     8341 gcttaaatga ttgaagttta tccgttattc aaaattagct tatcaaaaag gctatttttt
     8401 gagagaatga cgaatgtttt gccaagtgat atttcgggag gtagtaatga ctgcacaaat
     8461 tatttcgggg agtgaggttt cttcacaaat taaaaaaaag gtgagtgaga aaatcgctca
     8521 ttatcttgaa cagggtaaac gtaaccctgg tcttgcggtc attttagtgg ggaatgaccc
     8581 agcctctcaa gtgtatgtgg ggagtaaacg caaaagctgt gccgaaattg ggattgcgtc
     8641 gaaatcttat gatttacccg aagaaaccac agaggctgaa ttattagcac tgattgaaaa
     8701 gttgaatcaa gatgattcgg tcgatgggat tttagtccaa ttaccgttac ctaaacagat
     8761 cgattcgact aaagtgattg aagccatctt accacataaa gatgttgatg gattccaccc
     8821 ttataatgtt gggcgtttat ctcagcgtat tcccacttta cgcccttgca cgccatacgg
     8881 tgtgatgaag ttgcttgaaa caactggggt agatttatat ggtcaacacg cagtgattgt
     8941 aggtgcgtct aatattgttg gtcgcccgat ggcgttagaa ttgttgcttg gtggttgtac
     9001 agtcacagtt actcatcgct ttaccaaaga tttagagcat cacgttcgcc aagcagatat
     9061 tttagttgtg gcagtcggca agcctgaatt tattcccggg gagtgggtta aagacggtgc
     9121 tatcgtgatt gatgtaggga ttaaccgtgg agcagacggc aaactaaaag gtgatgtaga
     9181 gtattcagtt gcctcacaaa aagcggcatt tatcacccct gtccccggtg gggtaggccc
     9241 gatgacggtg gcaatgttaa tgcaaaatac cttgcagacg tatgaaaacc atttacaagc
     9301 ggtctaattt tacggatatt ttgcaaatcc tcggcattgg tcgaggattt ctttttctgg
     9361 gctttttcag cagaaaaggc taaaatactt gccattttta ttacacgatc cttattaaat
     9421 atgaaattta tcatcaaact tttccctgaa attatgatta aaagcgactc tgttcggaaa
     9481 cgctttatca aaattttaac ctcaaatatt cgcaacgtat tattaaaaga gactgaaaat
     9541 gtgtctgtgg ttcgccattg ggactttatt gaagttcggg cgaaagtgga cgaagaaacg
     9601 gcattagtgc tggatttgct taaacgcacg ccgggtattc accatatttt agaagtggag
     9661 gaaacccctt ttacggatat gcacgatatt tttgagcaga cttatgccgc agtgaaagct
     9721 gaactagaag gcaaaacgtt tagcgtgcgg gttcgccgta aaggaaagca cgatttccgt
     9781 tctcttgatg tagagcgtta tgtcggtggt gggctgaatc agcggattga aacggcgaaa
     9841 gtgaaattaa ccaacccaga tgttacggtc agaattgata ttgaacatga taaaatgttg
     9901 ctgattaaag ctcgccacga agggttaggc gggtatccaa tcggcacaca agaagatgtg
     9961 ttgtcattga tttcgggtgg ttttgattcg ggtgtatcga gctatatgct gattcgcaga
    10021 ggttctcgtg tgcattactg ttttttcaat ttaggtggtg ccgcacacga aattggcgtg
    10081 aaacagatgg catatcatat ttggagccgt tatagtacct cgcacaaagt ccgttttatc
    10141 gccattaatt ttgaaaatgt agtgggtgag attttagaaa aagttgataa cggacaaatg
    10201 ggcgtggtat taaaacgtat gatggtgcga gcggcaagcc gtattgccga gcgttttgat
    10261 attcaagcga ttgtgaccgg tgaggcgttg gggcaggtct ctagccaaac actgactaat
    10321 ttacgtttaa ttgataaggc atcagatacg ctggtattac gtccgctcat cactcacgat
    10381 aaagagcaga ttattgcaat ggcaaaagcg ataggcactg acgatattgc taaatcaatg
    10441 ccggagttct gtggagtaat ttctaaaaat ccgacggtta aggcaatcga aactaaaatt
    10501 ttggaagaag aaggcaactt taattttgag gtactagaac aagcggttca aacggcgagt
    10561 tatttagata ttcgtgagat cgctcagcaa accgaaaaag aggttgtttc ggttgaaacc
    10621 acaacagaat tgagtaaaaa cgatgttgtg ctagatattc gcagcccgga agaggttgat
    10681 gaaaaaccat tccgtttaga cggggttgaa gtaaaagaac tcccgtttta taaactttcc
    10741 agccagttta gtacgcttga ccaaagcaaa acctacttgc tctattgcca acgtggggta
    10801 atgagtaaac tgcaggctct ttatttgaaa gagaatggct acagcaatgt aaaagtgttt
    10861 cgagtgaaat aatgcctctt tgattgcacc ttaatgattg attaaggtgc aattttttac
    10921 caaataaggc ttgctaaaaa gagtaagatc acaggaaatt caagcattcc aacttgttta
    10981 acattccagc caaagcttgg cacaataatg gctcgggcag ttgcaattaa ataagcaaaa
    11041 aagaccgctt gtagagagca gagtatgtaa agcattgcta aaaccaaatg tattgcaata
    11101 ctgatttcca tataaattgg gtttcttcgc tctcgcacca tactctttat atagaaagtc
    11161 gtagcaataa aaaatagggt agggtggagc agaatctcaa actgatattg tttcgttacc
    11221 agataataag ctgccattcc cattatgcca aaggttagaa tgccggcaat atcattccat
    11281 aaattgcgtt catctttttg tttggcgtag tgaacttgca ctaacccaag cggtagaatt
    11341 atcggtaaaa attgcaaaat cgaaggctga gcgtagatca aaggtaatgc aaatagaatg
    11401 cttaagccaa agtagatttt cgcccatttt ttattgcgtt cagttggctt tttactgaaa
    11461 agtgagagaa aagggtagga aaagaagtag agaaacagcc acgacagccc aaagaaaata
    11521 tgcaaagtgc taaaaccact ttcaataacg gcgtagagaa acggcaacat tgccattgct
    11581 aatgcaccgt gttggttgga tataacgggt ttttctttga acattcaatt tccctcttaa
    11641 tgtggcaaat aaaaaggcga ctaaacagcc gcctttaaat tgtaagaaaa gttagaataa
    11701 ttttctagag gcttcaaata attcttcttt gaacggacga cgcatattat tgatcgcatc
    11761 aataatatcg tggtgaacca actgctcgtt ttgaataccg acacagtgac cgccaaagcc
    11821 ttgcagtaat aattccaccg catagacgcc catacgggag gccaaaatac ggtcgaaggc
    11881 acaaggcgaa ccaccacgtt gaatatgacc taatacggtt gcacgggttt cattgccgaa
    11941 acgtgcttca atttctttcg ctaatgcgtg aacatcggtc atcaattctg taattgcaat
    12001 aattgaatgg cgtttacctt tgtggaaacc ttcttcaatg cttcgcatta atgcatcttt
    12061 atctaagcct ttttccggta cgatcacata ttcgcaacca ccggcgaggg cagcacttag
    12121 ggttaaatca ccacagtggc gacccataat ttccacaatc gaaatacgtt ggtgtgaact
    12181 tgaagtatca cgcaggcggt caatcgcatc taatgcggtt tcaagggcag tttgatagcc
    12241 gatggtgtaa tccgttccca caatatcgtt atcaatcgta cccggaatac cgatacaagg
    12301 gtaaccaaat tcttcggtta ataatttagc ccccatataa gaaccgtcgc caccaataac
    12361 cactaatgca tcaatgctgt atttttttaa ggtttcgaca caatgtttgc gaacttctgg
    12421 tcttttaaaa tcagggaagc gggcagaacc taagaatgta ccgcctcggt tgatggtttc
    12481 agacacggaa cggcggtcaa gtgggatcac tttatcgtgg taaagcccat agtagccgtc
    12541 ttgaatacca caaacctcta aaccttcatt aagtgcggta cgaaccacac cacggattgc
    12601 cgcgttcatt cctggtgcat caccaccact ggttaatact gcaatttttt tgattttttt
    12661 actcatttaa aaacaccttg ttgataaatt aaagttaaat tggaaactgg tgcaaggtta
    12721 caatattcag ccttttcgtt ctactaaaaa atacgtattt ttttgattta gcttagcttt
    12781 cttgcaaaat ttcaagggta aaatctagag cgttgaaaaa atgctcaaca tcttgttgat
    12841 tattgtaatg ggcaagtgaa agtcgaactg ttccgacctc ttctaaatgg cgtaaataag
    12901 gcttggcaca atgctcccct tggcggatcg caattttact ttgggttaag aaagcggcaa
    12961 tatcggcagg gtgctgattt ttcaccacaa agctaatagt cggtgtattt tgttgcccga
    13021 taatttgcaa attttgataa gaatttaacc gcttgcaggt gtattcagcc aagtcataaa
    13081 gctgatgatt aagagcgaca aaatcccatt tttcgagcca agctagcact tgcccaaagc
    13141 cgataatgcc ggcgatattc ggcgtgccag cttccaagcg ataaggtaac tctgccacag
    13201 ttaattcact ttccgtaatg tttttcagca ttttgccgcc aaatacaagc ggttgaattt
    13261 gctccaaact ttgcaatttg ccggtaagca cgcccacacc gtttggacca tacattttat
    13321 gggcggaaaa agcgtagaaa tctgcatcta atttctgaac gtccacttgc tctgagcaaa
    13381 ctgcttgagc aatatctaac acaattttag cagagcaaga ttggcggata agcgggatta
    13441 tttgttccgc tggctggcga actcctgtta cgttagaaac taaattaaag gcaacaattt
    13501 tggttttttc cgataacgca tttttaaggg tttcaagctc aatttcatac ttatcattaa
    13561 gtggcaacac cacgagtttc gcccttgtac gctgtgccaa ctgctgccaa ggaataaaat
    13621 tagcgtgatg ttccgccact gaaattacaa tttcatcgcc tgctgcaatt tgatgctcca
    13681 agccataagc cacggtgtta atactttggg ttgtaccgct tgtccaaatc accgcttcac
    13741 gagtttccac attgaaacgt tttgcgacta aatctcgagc taattcatat tgttcggttt
    13801 gtggcaaatc gtactgactg cgatgcaccg accccgcaga agcgtaaaac tcacttgttg
    13861 cttcaatgag tacatcaggt ttcagcgttg tagcggcaga atctaaatac gtccatccgt
    13921 cagatttttc aaaaaaaggg aaatgggtgc gaaattgggt gttaagcata agttaattcc
    13981 taagagttgt ggaaaattga gttaccaaga aaatacctat tataaaggaa tgttttgagg
    14041 taagaagc
//
LOCUS       DANLXD010000069        13701 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.069, whole genome shotgun sequence.
ACCESSION   DANLXD010000069 DANLXD010000000
VERSION     DANLXD010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13701)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13701)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13701
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.069"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            13..327
                     /locus_tag="PXD18_001711"
     CDS             13..327
                     /locus_tag="PXD18_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciU family protein"
                     /protein_id="HDL6302124.1"
                     /translation="MKKLTPDEAIDIAYDIFLEMAGENLDPADILLFNLQFEERGAVE
                     MVETSEDWDQEIGTLIDPDAFAEVWVGLVNEQDEMDDVFARFLISHDEENREYHVVWK
                     EK"
     gene            340..852
                     /gene="hpaC"
                     /locus_tag="PXD18_001712"
     CDS             340..852
                     /gene="hpaC"
                     /locus_tag="PXD18_001712"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HDL6302125.1"
                     /translation="MANIDTNQPIEASLKFREAMAHLSSAVSIVTTNGVAGKAGLTVS
                     SVCSVTDSPPTLLFCINKNSHVHDIIQQNGKVCVNVLSHEQEDLAKHFAAILESTMEE
                     RFGWDIWNNGFDDQPVLRSAISALQGNIVDTHAVGTHTIFVVEVSHIDVEPNHSLVYF
                     ARQFRSVNID"
     gene            970..1842
                     /gene="tehB"
                     /locus_tag="PXD18_001713"
     CDS             970..1842
                     /gene="tehB"
                     /locus_tag="PXD18_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HDL6302126.1"
                     /translation="MENLICYKQMPVWTKATLPQMFQEKHNTKVGTWAKLTILKGSLK
                     YYELTEEGEIIKEDIFDANHQRPMVEPQLWHKVEALSDDLECQLAFYCKPEDYFAKKY
                     NLTATHSEVLNAVNYTKGGKALDLGCGRGRNALYLNLLGFDVTAVDHNQESIDFLNYM
                     IEKEQAQNITTAVYDINEATIGSQNGEYDLIISTVVMMFLNRERIPAIIENMQKNTKV
                     GGYNLIVCAMSTDDYPCPMPFSFTFKEGELADYYQGWELVKYNEDLGHLHKTDENGNR
                     IQLRFATMLAKKIS"
     gene            1980..3017
                     /gene="purM"
                     /locus_tag="PXD18_001714"
     CDS             1980..3017
                     /gene="purM"
                     /locus_tag="PXD18_001714"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011962107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HDL6302127.1"
                     /translation="MSNTQLSYKDAGVDIHAGNELVERIKPDVKRTRRPEVMGGLGGF
                     GALCALPTKYKEPILVSGTDGVGTKLRLAIDLNKHDTIGQDLVAMCVNDLVVQGAEPL
                     FFLDYYATGKLEVDVATNVVKGIADGCVISGCALVGGETAEMPGMYHEGDYDLAGFCV
                     GVVEKSKIIDGSTVKTGDALIALASSGPHSNGYSLIRKVLEVSRSNPATDLLEDKPLS
                     EHLLAPTKIYVKSILKLVEEVDVHAIAHLTGGGFWENIPRVLPESAKAVIDESSWQWP
                     AIFSWLQEKGNISRYEMYRTFNCGVGMVIALPERDVEKALTLLKESGENAWLIGKIED
                     LGTGSEQVEIR"
     gene            3095..3373
                     /locus_tag="PXD18_001715"
     CDS             3095..3373
                     /locus_tag="PXD18_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HDL6302128.1"
                     /translation="MQLFWPIYFVLMNLAALYLMYSDKQKAIKKEWRVPEITLLSFCL
                     LGGAIGVYLGMKYFRHKTQHWYFHVAVVLSTFAWLIGLPYFYLALSSY"
     gene            3516..4943
                     /gene="aspA"
                     /locus_tag="PXD18_001716"
     CDS             3516..4943
                     /gene="aspA"
                     /locus_tag="PXD18_001716"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HDL6302129.1"
                     /translation="MSDVRIEHDLLGEREVPNSAYWGIHTLRAIENFNISNVTISDVP
                     EFVRGMVMVKKATALANGELGAIPKKIAKAIVAACDEVLVKGRCLDQFPSDVYQGGAG
                     TSVNMNTNEVIANLALEILGEAKGKYDIVNPMDHVNASQSTNDAYPTGFRIAVYNSIT
                     KLINKITYLQTAFENKATEFSDVLKMGRTQLQDAVPMTLGQEFKAFAVLLDEEVRNLK
                     RTAELLLEVNLGATAIGTGLNTPEGYSTLAVKYLAEVTQLPCSLSENLIEATSDCGAY
                     VMVHGALKRTAVKLSKVCNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPEV
                     VNQVCFKVIGNDTTVTFAAEAGQLQLNVMEPVIGQAMFESIELLSNACINLRDKCIDG
                     ITANRDICQNYVFSSIGIVTYLNPFIGHHNGDIVGKICATTGKSVREVVLERGLLTEE
                     QLDDILSIENLMNPTYKAKRFTEEE"
     gene            complement(5018..7036)
                     /gene="rep"
                     /locus_tag="PXD18_001717"
     CDS             complement(5018..7036)
                     /gene="rep"
                     /locus_tag="PXD18_001717"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HDL6302130.1"
                     /translation="MKLNSQQQQAVEYTKGACLVLAGAGSGKTRVIINKIAHLIAHCG
                     YSPKQIAAVTFTNKAAREMRERVDHSIGKENSKGLTISTFHTLGFEILKREYKLLGFK
                     SGMTLFDEQDQIALLKHLLPENVTEDKDLLKALIATISNWKNDLLSPERVLTRVRDER
                     ERVFSHFYQLYQNQLKAYNALDFDDLIMLPVLLFRQFPEAKSRWQQKIRYLLVDEYQD
                     TNTSQYELIKLIVGNEPNFTVVGDDDQSIYSWRGAKPENMQRLREDFDLQVIKLEQNY
                     RSSQRILHCANILIDNNDHLFSKRLFSELGQGEKLQVIEAKNEEHEAERIVGELIAHR
                     FSKKTKYKDYAILYRGNHQSRLLEKLLMQNRIPYKISGGTSFFARAEIKDMMAYLRLV
                     VNQDDDAAFLRIVNTPKREIGAATLEKLGILANEKQVSLFEAIFDFELIQRLTPKPYQ
                     ALQDFARWIVEIADQADRSDPIEAVKDLLAKIQYEAYLYEMAANPKVAEMQSRNVQTL
                     FEWVQAMLEGDEIEPPMNLVQVVNRLTLRDMLERGEEDDEADQVQLMTLHASKGLEFP
                     HVFLIGMEEGILPHQTSLDEDNVEEERRLAYVGITRAQQTLTFSLCKERRQYGEIIKP
                     EPSRFLLELPQDDLEWESEKPRMTEQEKEAKSSANIANLMAMLKANKK"
     gene            7284..8399
                     /gene="potA"
                     /locus_tag="PXD18_001718"
     CDS             7284..8399
                     /gene="potA"
                     /locus_tag="PXD18_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     ATP-binding protein PotA"
                     /protein_id="HDL6302131.1"
                     /translation="MEKVEQKAIIELKNVTKSYGSKTILKNLNLTINDGEFLTILGPS
                     GCGKTTALRLIAGFEDLTEGSIILDGQDVSNVPAEQRPVNTVFQSYALFPHMTIFENV
                     AFGLRMQKVPNAEIEPRVMEALRMVRLEDRAQQKPAQLSGGQQQRIAIARAVVNKPKV
                     LLLDESLSALDYKLRKEMQNELKALQRQLGITFIFVTHDQEEALTMSDRIIVMNAGKI
                     AQDGTPREIYEEPSNLFVARFIGEINVFDATVIERVDATNVKANVEGRICNIKVEDLE
                     VQPNQKLKVLLRPEDIVIEELDENESSKAIIGHIIDRNYKGMTLESSVRLDHNGMNVL
                     VSEFFNEDDPNIDHEVGQKVALTWYEGWEVVLNDEGE"
     gene            8386..9249
                     /gene="potB"
                     /locus_tag="PXD18_001719"
     CDS             8386..9249
                     /gene="potB"
                     /locus_tag="PXD18_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005698572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotB"
                     /protein_id="HDL6302132.1"
                     /translation="MKANNKFQNGAVATIFGWLLLFVLVPNVLVLIISFLTENRQSQY
                     FVDFAFSFDAYKSLFNDTYAAVLWNSLYMAGIATFFCLIIGYPFAFFIAKMPERIRPF
                     LLFLVVLPFWTNSLIRIYGIKIFLGVKGFLNESLMALGIISEPMRLLNSEIAIIIGLV
                     YILLPFMILPLYSSIEKIDNRLLEAAKDLGANAFQRFIKVTIPLTMPGIVAGCLLVLL
                     PAMGMFYVADLLGGGKTPLVGNIIKSLFLNTNQFALGSAVSIALTILMALMLYVYYRA
                     NKLLNKKVELE"
     gene            9249..10016
                     /gene="potC"
                     /locus_tag="PXD18_001720"
     CDS             9249..10016
                     /gene="potC"
                     /locus_tag="PXD18_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotC"
                     /protein_id="HDL6302133.1"
                     /translation="MKKMFRNLFMLVVFAYLYIPIIILVINSFNEDRFGLNWKGFTWN
                     WYERLFSNDTLVQATLNSLTIAFFAATFSTILGALTSIALYRYRFRGKKLVGGMLFVV
                     MMSPDIVMAVSMLVLFMILGIKLGFISLLIAHITFCLPYVVIAISSRLSDFDGKMLEA
                     AKDLGASEVTILRKIILPLALPSIISGWLLSFTISLDDVIVSSFVTSPSYEVLPLKIF
                     SLVKTGVTPEVNALATIMIIFSLTLVVLSQLVVKKKV"
     gene            10217..11140
                     /gene="oppB"
                     /locus_tag="PXD18_001721"
     CDS             10217..11140
                     /gene="oppB"
                     /locus_tag="PXD18_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppB"
                     /protein_id="HDL6302134.1"
                     /translation="MLKFIFKRLLEAIPTLLILITFSFFLMRLAPGSPFTSEKAYPPK
                     VMANIEAKYHLNEPLYKQYFLYMENLSKGDFGPSFKYKDQSVNNLIASAFPVSIKLGI
                     TAFIFAVLIGLTAGTIAALKQNSKWDYLVMGFSMTGIIMPSFVFAPLLVLMFAIYLKW
                     LPAGGWNGGQLYYMVLPVLSLTISYVAGIARITRGSMIEVLHSNFIRTAKAKGLPMRK
                     IIFKHALRPALLPVITYLGPAFVGIITGSMVIESVFGLPGIGQLFVNGALNRDYSLVL
                     SLTILVGTLTILFNAIVDILYAVIDPKIRYS"
     gene            11155..12054
                     /gene="oppC"
                     /locus_tag="PXD18_001722"
     CDS             11155..12054
                     /gene="oppC"
                     /locus_tag="PXD18_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppC"
                     /protein_id="HDL6302135.1"
                     /translation="MQNSSKNQPLVEVTSTIQGRSLWQDARRRFFRNKAAVASLIILC
                     CIILFITFAPMLMPFSYEDTDWNMMGIAPDFESQHYFGTDSSGRDLLVRVAIGGRISL
                     MVGIAGALIAVLIGTIYGAISGYFGGKVDMVMMRFLEILSSFPFMFFVILLVTFFGQN
                     IFLIFIAIGMVAWLNLARIVRGQTLSLKNKEFVEAAIVCGVSRRQIIWRHIVPNVLGL
                     VVVYASLEVPSLILFESFLSFLGLGTQEPMSSWGALLSDGAAQMETSPWLLAFPAFFL
                     CLTLFCFNFIGDGLRDALDPKDK"
     gene            12064..13659
                     /locus_tag="PXD18_001723"
     CDS             12064..13659
                     /locus_tag="PXD18_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6302136.1"
                     /translation="MELLAVNNLDVYLKTDEELVHAVRNVSFSIEKGQTLAIVGESGS
                     GKSVTSMAIMQLLPKNIVSFGERSSIIFEEQNLLTLSEKAMQTVRGDRIGMIFQEPMT
                     SLNPYMPIGKQVAETVQTHNPQISNAEAEKMVLETLQKVKIPDAEKKMICYPHEFSGG
                     QLQRIMIAMAIINKPDLLIADEPTTALDVTTQAEILDLMHDLQRDMGMAIILISHDLR
                     LVHKYSDLVCVMQNGEIIERGETETVFTNPQHPYTVELLTPIPTNLKGELPPNAPTLL
                     QGEHIKVDYILKRSLFGKPKKVFNALKDISLHLKTGETLGIVGESGSGKSTLGRAIMQ
                     ILDYRGNITFAGKTLANLNKAERQALKKDMQMVFQDPFNSLSPRLTVGEIIAEGLTVH
                     CPQMSKTERREKVMKMLEEVNLNPAMINRYPHEFSGGQRQRIAIARAIILEPKFVLLD
                     EPTSALDRSTQITVIELLNRLQKKYGLSYIFISHDLAVIKALSDRVIVMSQGEIVESG
                     DVTQIFENPQQEYTKRLILASNL"
BASE COUNT         3989 a         2718 c         2821 g         4173 t
ORIGIN      
        1 tagaataacg aaatgaaaaa attaacccct gatgaagcca ttgatattgc ctacgatatt
       61 ttcttagaaa tggcaggcga aaatttagat cctgccgata ttttactgtt caacctccaa
      121 tttgaagagc gtggtgcagt ggaaatggtc gaaacttctg aagactggga tcaagaaatc
      181 gggactttaa ttgaccctga tgcctttgcc gaagtttggg ttggcttagt caatgaacaa
      241 gatgaaatgg acgatgtatt cgcccgtttc ttaatttccc acgatgaaga aaaccgtgaa
      301 tatcacgttg tttggaaaga aaaataaaaa ggagaaaaaa tggctaatat cgacactaat
      361 caaccaatag aagcctcgct taaatttcgt gaagcaatgg ctcacttatc ttctgcggtg
      421 agcattgtga caaccaatgg cgtagccggc aaagcagggc tgacggtttc gtctgtttgt
      481 tccgttaccg attccccacc aacgctctta ttttgcatta ataaaaacag ccacgttcac
      541 gatattatcc aacaaaacgg caaagtatgc gttaatgtgt taagccacga acaagaagac
      601 ttagcaaaac attttgccgc cattttagaa agtacaatgg aagaacgctt tggttgggat
      661 atttggaaca acggctttga cgatcagcct gtgttacgca gtgctatttc tgctttacaa
      721 ggcaatattg ttgatacgca cgcagtgggt acgcatacta tttttgtggt agaagtgagc
      781 catattgacg tagagccgaa ccacagttta gtttattttg cccgccaatt tagaagcgtg
      841 aacattgact aaaatatatt taacagaaat ttgatcaaat ccgacttttt tagtcggatt
      901 ttttatttcc tgtttttaaa acagtgctaa aattttgccg tttatgtttg actgacaaaa
      961 ggaaacaaaa tggaaaattt aatttgctac aaacaaatgc cggtgtggac aaaagcaacc
     1021 ttaccacaaa tgttccaaga aaagcacaac accaaagtcg gaacttgggc aaaactcacc
     1081 attctcaaag gttctctcaa atattatgaa ttaaccgaag agggagaaat tatcaaggaa
     1141 gatatttttg atgcaaacca ccaacgccca atggttgagc ctcaactttg gcataaggtt
     1201 gaagctcttt ctgacgattt agaatgccag ttggctttct attgcaagcc ggaagattat
     1261 tttgctaaaa aatataatct gaccgctacc cattcagaag tgctaaatgc cgtcaattat
     1321 accaaaggtg gcaaagcgtt agatttaggt tgcgggcgag gacgcaatgc actttatctg
     1381 aatttactgg gttttgatgt cactgctgtt gatcataatc aagaaagcat tgattttctc
     1441 aactatatga tcgaaaaaga acaagctcaa aacattacta ccgctgttta tgatattaac
     1501 gaggcaacta tcggctcgca aaacggtgaa tatgacctga ttatttccac tgttgtaatg
     1561 atgttcttaa accgtgaacg cattcctgcc attattgaga atatgcagaa aaacactaaa
     1621 gtcggcggtt ataacttaat cgtatgtgca atgagtaccg atgactaccc ttgcccgatg
     1681 ccgttctcct ttaccttcaa agaaggcgag ctcgccgatt attatcaagg ttgggaatta
     1741 gtcaaatata acgaagattt aggacattta cacaaaactg atgaaaacgg caaccgcatt
     1801 caactacgtt ttgcgacaat gttggcgaaa aaaatcagct aaacttaacc gcttgcaggg
     1861 ggaattagct tccccctaat tcatcaaatc cattctattt attttcactt tttcattccg
     1921 caaacgtttg cttgtgctat aatggcttcg ttttttagtc atttactgtt gaggttaaag
     1981 tgagcaacac acaactaagt tacaaagatg ccggcgttga tattcacgca ggaaacgagt
     2041 tagtcgaacg aatcaagcct gatgttaaac gcacccgtcg ccctgaagta atgggcggat
     2101 taggtggttt tggtgcttta tgtgctttac cgacaaaata taaagagccg attttagttt
     2161 ccggtaccga tggcgtcggc acaaaattac gcttagccat tgacttaaac aaacacgata
     2221 ctatcgggca agatttggta gcgatgtgtg tgaatgacct tgtcgtgcaa ggtgctgaac
     2281 cgcttttctt cttagattat tacgccaccg gtaaattaga ggttgatgta gccaccaatg
     2341 tcgtcaaagg cattgcagac ggttgcgtga tttcaggttg tgctttagtg ggaggtgaaa
     2401 cggctgaaat gccgggaatg taccacgaag gcgattacga tttagccgga ttctgtgtcg
     2461 gtgtggtaga aaaatctaaa atcattgacg gttcaacggt gaaaaccggt gatgccttaa
     2521 ttgcattagc gtccagtggc ccgcattcca acggctattc gttaattcgt aaagtattgg
     2581 aagtcagccg atccaatcct gcaaccgatt tattggaaga caaaccctta agcgaacact
     2641 tattagcccc aactaaaatt tatgtaaaat caatcctaaa attagttgaa gaagttgatg
     2701 ttcacgctat cgctcactta accggtggcg gtttctggga aaatattcca cgcgtattgc
     2761 cggaatctgc caaagcggtg attgatgaat cgagctggca atggccggcg atatttagct
     2821 ggttacagga aaaaggcaat atcagccgtt atgaaatgta ccgtactttc aactgcggtg
     2881 tcggaatggt gatagcctta cctgagagag atgtcgaaaa agcccttact cttcttaaag
     2941 agagtggtga aaatgcgtgg cttatcggta aaattgaaga cttaggcacc ggtagcgagc
     3001 aagttgaaat ccgctaattt gcaaaataaa tgctaaaatt gaccgcttgt agtaactgat
     3061 ctgcaaacgg ttaaattttt attgaggaat gcaaatgcaa ctattttggc ctatctactt
     3121 tgtcttaatg aacctagctg ccttatattt aatgtatagt gacaaacaaa aagcgatcaa
     3181 aaaagaatgg cgagtgccag aaattactct cctctctttt tgcctcttag gtggggctat
     3241 cggtgtttac ctaggtatga aatactttcg ccataaaacc caacattggt atttccacgt
     3301 cgctgttgtg ctttctactt ttgcttggct gattggcttg ccttactttt atttagcttt
     3361 atcatcatat taatttatca ttactttttt taatccgaaa gcccaattta tatcctagtc
     3421 cgctcacaaa aaatttgatt tagatcgcat tatttgtcta ttaaaatcgt tattatctac
     3481 caaaatcgat tgtcatttat tttaaggaga tgaatatgtc agatgtgcgt attgaacacg
     3541 atttacttgg tgaaagagaa gtacctaata gtgcttattg gggcattcat acattaagag
     3601 cgattgagaa ttttaatatc tcaaatgtca ccatttctga tgtacctgaa tttgtgcgtg
     3661 gcatggtaat ggtaaaaaaa gctactgcgt tggcaaatgg tgaattgggt gcaatcccga
     3721 aaaaaattgc caaagctatt gtggcagcct gtgatgaagt attagtgaaa ggacgctgtc
     3781 tcgatcaatt cccttcagat gtttatcaag gtggagccgg cacatcggtg aatatgaata
     3841 ccaatgaagt gattgccaac cttgcattag aaattttggg cgaggcaaaa ggtaaatatg
     3901 atattgtcaa tccaatggat cacgttaatg caagccaatc caccaatgat gcctatccaa
     3961 ccggtttccg catcgcggtt tataacagta tcactaaatt aatcaataaa atcacttacc
     4021 tacaaactgc atttgaaaat aaagccactg agttttccga tgtactaaaa atgggaagaa
     4081 cgcagttaca agatgccgtg ccaatgacgc tcggtcagga atttaaagct tttgccgtat
     4141 tattagatga agaggttcgt aaccttaaac ggacggcaga attgcttctt gaagtgaatt
     4201 taggcgcaac cgctatcggt actggtctga atacgccaga gggttactct actcttgcag
     4261 ttaaatattt agccgaagtc acgcaactgc cttgctcact gtctgaaaat ctcattgagg
     4321 caacatctga ctgtggtgct tatgtaatgg ttcacggtgc attaaaacgc accgccgtca
     4381 aactttctaa agtgtgtaat gacttacgat tactttcatc aggcccacgt gccggcttaa
     4441 atgaaattaa tcttccggaa ttacaagccg gctcatctat tatgccggca aaagtaaacc
     4501 ctgttgtacc tgaagtcgta aaccaagtgt gctttaaagt gattggtaac gacaccaccg
     4561 ttacttttgc agcagaggcc ggtcaattac agcttaacgt aatggagccg gttatcgggc
     4621 aagcaatgtt tgaatctatc gagctgcttt ccaatgcatg tattaatcta cgtgataaat
     4681 gtattgacgg tattaccgct aaccgtgaca tctgccaaaa ctatgtgttc agctctattg
     4741 gtattgtgac ctacctcaat ccatttatcg gccaccataa tggtgatatt gtcggcaaaa
     4801 tttgtgcaac caccggcaaa agtgtacgag aagttgtgct tgagcgaggc ttactcaccg
     4861 aagaacaact cgatgatatt ctctcgattg agaacttaat gaatccgact tataaagcca
     4921 aacgctttac cgaagaggaa taatcattgt ttacaagcgg tctgattctg gcaaaaaatt
     4981 gcaaattttt accaaaatca gaccgcttgt tatcccatta tttcttattt gctttcagca
     5041 tcgccattaa atttgcaata tttgcagaag attttgcctc tttttcctgt tcggtcattc
     5101 ttggcttttc actttcccac tccaaatcat cttgtggcaa ttccagtaaa aaccggctcg
     5161 gctcaggttt gatgatttcg ccatattggc gacgttcttt acacagtgaa aacgtgagcg
     5221 tttgttgggc tcgggtaatg ccgacataag ccaaacgccg ctcttcttct acattgtcct
     5281 catcaaggct ggtttggtgt ggcagaatcc cctcttccat accgattaag aaaacgtgcg
     5341 gaaattccaa ccctttcgag gcgtgaagag tcattagttg aacttgatcg gcttcatcgt
     5401 cctcttcgcc acgttcgagc atatctcgca aggttaaacg gtttaccact tgcaccaaat
     5461 tcatcggagg ctctatttca tcgccctcta acatcgcttg cacccattca aacaaggtct
     5521 gcacattacg gctttgcatt tccgctactt ttgggttcgc cgccatttca tacaaatagg
     5581 cttcatactg aattttcgcc aacagatctt ttactgcttc aatcggatcg gatctatcgg
     5641 cttgatcggc aatttccaca atccagcggg caaaatcctg taaggcttgg taaggctttg
     5701 gcgtgaggcg ttgtatgagt tcaaaatcaa aaatcgcctc aaacaaactg acctgctttt
     5761 cattagcaag tatgcctaat ttttctagcg ttgccgcccc aatttcccgt ttcggcgtat
     5821 tcacaatacg caagaaagct gcatcatcgt cttgattcac taccaaccgc agatacgcca
     5881 tcatatcttt gatttccgct cgagcaaaaa atgacgtacc acccgaaatt ttatacggaa
     5941 tgcggttttg cattagcaat ttttccaaca agcgggattg atggttgcct cgatacaaaa
     6001 ttgcataatc tttgtatttg gtctttttcg agaaacgatg ggcaatcagc tcgcccacaa
     6061 tgcgttccgc ttcgtgttcc tcattttttg cctcaatgac ctgtaatttt tccccttgcc
     6121 ccagttctga aaacagccgc ttgctaaaca agtgatcgtt attatcaatc agaatattgg
     6181 cacaatgcag aatccgctgg ctggaacggt aattttgctc aagtttaatc acttgcaaat
     6241 caaaatcttc ccgtaaccgt tgcatatttt caggcttcgc cccacgccaa gagtaaattg
     6301 attggtcatc atcgcccacg accgtaaagt ttggctcgtt gccgacaatc agcttaatta
     6361 actcatattg gctggtgttg gtgtcttgat attcatcaac taacaaatag cgaattttct
     6421 gttgccaacg agattttgct tcgggaaatt ggcggaacag caacaccggc aacataatca
     6481 aatcatcaaa atccaacgca ttataagcct taagttgatt ctggtagagc tgataaaaat
     6541 gtgaaaacac tcgctcacgt tcatcacgca cacgagtaag taccctttca ggcgaaagca
     6601 aatcgttttt ccagttagaa atagtggcaa ttaaggcttt cagcagatcc ttatcttccg
     6661 tcacattttc aggcaataaa tgtttcagca aagcaatttg atcctgctca tcaaacaagg
     6721 tcatacccga tttaaaaccg agcaatttat attcgcgttt taaaatttca aacccaagtg
     6781 tgtgaaaagt cgaaatggtt aaacctttgc tgttttcttt gccgatagaa tgatccaccc
     6841 gttcacgcat ttcccgagca gctttgttgg taaaggttac tgctgcaatc tgcttaggcg
     6901 aatagccaca atgtgcaatt aaatgtgcga ttttattaat aatcacccga gtcttacccg
     6961 agccggcacc agccagcaca aggcaagccc ctttggtata ttctactgct tgttgttgtt
     7021 gagaattgag tttcattgaa tctattcaaa agtaattttg acaactattt taacggaaag
     7081 aaaacaagcg gtcgaatttt caggaaaatt tgcaaaaaac tttgaaaatc cgaccgcttg
     7141 ttcatcagag aaaaatcccc aaaacgcaaa tttttccttt caatcttgcc cctttagcta
     7201 tatcattata agttgatttt ttaggggcaa atgcctgatt ttataactcc ttttcttttt
     7261 aatttaaggg aaaaaaacag tagatggaaa aagtagaaca gaaagctatc attgagctta
     7321 aaaatgtaac aaaaagctac ggtagtaaaa cgattcttaa aaatttaaat ttaaccatta
     7381 acgatggtga atttttaaca attttaggcc cttccggttg tggtaaaaca actgcgttac
     7441 gtttaattgc cggttttgaa gatttaactg aaggttcaat tattcttgat gggcaagatg
     7501 tttctaacgt tccggcggag caacgcccgg taaacaccgt attccaaagc tatgcccttt
     7561 tcccacatat gacgattttt gaaaacgtgg ctttcgggct gcgtatgcaa aaagtgccaa
     7621 atgctgaaat tgagccacgt gtgatggaag cattacgaat ggtgcgttta gaagaccgcg
     7681 ctcaacaaaa accggctcag ctttccggtg gtcagcaaca acgtattgca attgcccgtg
     7741 cggtggtaaa taaaccgaaa gtattgttgt tagacgaatc gctttctgcg ttagattata
     7801 aattgcgtaa agagatgcaa aatgaattaa aagcattgca acgtcaatta ggcattacct
     7861 ttatttttgt gacccacgat caggaagaag ccttaaccat gtctgatcgt attatcgtaa
     7921 tgaacgctgg taaaatcgct caagacggta caccacgtga gatttacgaa gagccaagta
     7981 acttatttgt agctcgtttc atcggcgaaa ttaacgtttt tgatgcaact gtaattgagc
     8041 gtgttgatgc aactaatgta aaagcaaacg tagaaggtcg catttgcaat atcaaagtgg
     8101 aagatttaga ggttcagccg aaccaaaaat taaaagtatt gttacgccct gaagatattg
     8161 tgattgagga gttagacgaa aacgaaagct cgaaagcaat tatcggtcat attatcgacc
     8221 gtaactacaa aggtatgaca ttagagtcta gcgtgagatt agatcataac ggtatgaatg
     8281 tattggttag cgagttcttc aatgaagacg atccgaacat tgaccacgaa gtgggacaaa
     8341 aagttgctct tacttggtat gaaggctggg aggttgtgtt aaacgatgaa ggcgaataac
     8401 aaattccaaa atggtgcggt cgcaactatt ttcggttggt tattactttt cgtattagtg
     8461 ccgaacgtac tcgttttaat catcagcttc ttaacagaaa accgtcaaag tcagtatttt
     8521 gtggactttg catttagttt tgatgcttat aaatcactgt ttaatgacac ctatgcagca
     8581 gtattgtgga actcgctata tatggcgggc attgccacct ttttctgttt gatcatcggc
     8641 tatccctttg cattttttat tgccaaaatg ccggaaagaa ttcgtccgtt tttactgttt
     8701 ttagtagttc taccgttttg gactaactca ctgattcgta tttatggcat taagattttc
     8761 ttaggcgtaa aaggcttttt aaatgaaagc ttgatggctt taggtataat cagcgagcca
     8821 atgcgtttat taaactcaga aattgcgatt attattggtt tagtttacat tctattacct
     8881 tttatgattc taccgcttta ttcatcaatc gagaaaattg ataaccgctt actagaagct
     8941 gcaaaagact taggtgcaaa cgccttccag cgttttatta aagtgactat tccattaaca
     9001 atgccgggca ttgtcgcagg ttgtttatta gtattacttc cggcaatggg tatgttctat
     9061 gtggcagatt tattaggcgg cggtaaaaca ccgttagtag gtaacattat taagagcttg
     9121 ttcttaaata ccaaccaatt tgcattaggt tcagcagtaa gtattgcatt aactatctta
     9181 atggcattaa tgctttatgt ttactatcgt gcaaacaaat tattaaataa aaaggtggag
     9241 cttgaataat gaaaaagatg tttagaaacc tttttatgtt ggttgttttt gcatatctct
     9301 atattccaat tatcatttta gtgatcaact cctttaatga agaccgcttt ggattaaatt
     9361 ggaaaggctt tacttggaat tggtatgagc gtttattcag taatgatacg cttgtacaag
     9421 caacattgaa ctcattaact attgcgttct ttgcggcaac attctcaacc attttagggg
     9481 cattaacctc tattgcgctt taccgttacc gtttccgtgg taaaaagcta gtgggcggaa
     9541 tgttattcgt ggtaatgatg tcgcctgata tcgtaatggc ggtatctatg ctcgtattat
     9601 ttatgatctt aggtatcaag ctaggcttta tttcgctatt aattgcacac attactttct
     9661 gtttgcctta tgtggtaatt gcaatttcct cacgcctcag cgattttgac ggcaaaatgc
     9721 tagaagctgc aaaagaccta ggtgcaagtg aagtgactat tttgcgtaaa attattttac
     9781 cactggcatt accttcgatt atttcaggct ggttgttaag ctttacgatt tcgttagatg
     9841 acgttattgt ttcatctttc gtgacaagcc caagctacga agttttacca ctgaaaattt
     9901 tctcattggt taaaacaggt gtaacacctg aagtgaatgc actagcaact attatgatta
     9961 ttttctcatt aacattagtg gtattaagcc agttagtagt gaagaaaaaa gtctaaaaat
    10021 cactaaaaat cgtatacata aatcagcact ttaaagagta ttaaagtgcc gattttttta
    10081 caaaaataag ctaaaaaaac aaccgcttaa gaataatgaa ttcttataaa aatagccata
    10141 actaatcaat atctttacaa agccgttaat ttacgctatt aattgcctac caatataact
    10201 aaaaagagtg gtgcttatgc tgaagtttat ttttaaacgt cttcttgagg cgattccaac
    10261 cctactaatt ctgattacct tttccttttt cctgatgcgg cttgccccgg gtagcccatt
    10321 taccagtgag aaagcctatc cgccgaaagt aatggcaaat atcgaggcaa aatatcacct
    10381 gaatgaaccg ctgtataagc agtattttct ttatatggaa aatctgtcaa aaggcgattt
    10441 cggtccatct tttaaatata aagatcaatc ggtaaataat ctgattgctt ctgcgtttcc
    10501 tgtttcgata aaactgggca ttactgcctt tatttttgcg gtgcttatcg gtttaaccgc
    10561 aggaactatc gctgcactta agcaaaatag taaatgggat tatttagtga tgggcttttc
    10621 aatgacgggt attattatgc cgagctttgt ctttgctccg ctgttggtac tcatgtttgc
    10681 gatttatctc aaatggttgc ctgccggtgg ttggaacggt ggtcagctct actatatggt
    10741 tttacctgtt ctctctttaa ccattagcta tgttgccggc attgcccgta ttactcgtgg
    10801 ttcaatgatt gaggtgttgc actctaattt tattcgcacc gctaaggcaa aaggcttgcc
    10861 aatgcgtaaa attattttca aacacgcttt gcgtccggca ttgttgcctg tgatcactta
    10921 tttaggcccg gcttttgttg gcattattac cggctcgatg gtaattgaaa gcgtgtttgg
    10981 cttaccggga atcgggcagt tgttcgtaaa cggagcatta aatcgtgact attcattagt
    11041 attaagccta accattttgg taggtacgct caccatttta tttaatgcga ttgttgatat
    11101 tttatatgcg gtcatcgacc cgaaaattcg ttattcatag gagtaaagcg gaaaatgcaa
    11161 aattcttcaa aaaatcaacc gcttgttgag gttacctcaa ccattcaagg acgaagttta
    11221 tggcaagatg cacgccgccg ttttttccga aataaggcgg ctgtggcaag tttgattatt
    11281 ctttgttgta ttattctttt tattaccttt gccccaatgc taatgccgtt tagctatgaa
    11341 gataccgatt ggaatatgat ggggattgct ccggattttg aatctcaaca ctatttcggt
    11401 actgattctt cagggcgtga tttgctggtt cgagttgcaa tcggtggacg catttcgtta
    11461 atggtaggga ttgccggtgc attaattgcg gtgcttatcg gtacaatcta tggagcaatt
    11521 tccggttatt tcggcggtaa agtcgatatg gtgatgatgc gttttctgga aattttaagc
    11581 tcattcccat ttatgttctt cgtaattttg ctggttacgt tcttcgggca gaatattttc
    11641 ctgattttca ttgcaatcgg tatggtagcg tggctgaacc ttgcccgtat tgtacgtggt
    11701 caaactcttt cgcttaaaaa taaagagttt gtggaagcag cgattgtgtg tggcgtttcc
    11761 cgccgtcaaa ttatttggcg acacattgtg cctaacgttt taggcttagt ggtggtttat
    11821 gcctcccttg aagtaccatc tctgattttg tttgaatcgt tcttaagttt cttagggctt
    11881 ggtacacaag agccgatgag cagttggggg gcattattaa gcgacggagc ggcacaaatg
    11941 gaaacctcgc cttggctact ggctttccct gcctttttct tatgtttaac actgttttgt
    12001 tttaatttta ttggtgatgg cttgcgtgat gccctcgatc caaaagataa atagaggttt
    12061 agaatggaat tattagcagt aaataatctc gatgtttatt taaaaacgga cgaagaatta
    12121 gttcacgcag tgcgtaatgt ctcgttctcg attgaaaaag ggcaaaccct tgcgattgtg
    12181 ggggaatcgg gttcgggtaa atccgttact tcaatggcaa ttatgcagtt attgcctaaa
    12241 aatatcgtct cattcggtga acgctcaagc atcatttttg aagaacaaaa cttgcttact
    12301 ctatctgaaa aagcaatgca aacagttcga ggtgatcgca tcggtatgat tttccaagag
    12361 ccaatgacct cactcaatcc ttatatgccg attggcaagc aggttgctga gacggttcaa
    12421 acccataatc cgcaaatcag caatgccgaa gcggaaaaaa tggtgttgga aactttgcaa
    12481 aaagtaaaaa ttcccgatgc ggaaaagaaa atgatttgct atccgcacga gttttccggc
    12541 ggtcagctac aacgaattat gattgcaatg gcaattatca acaaacccga tttattgatt
    12601 gccgatgagc cgaccaccgc cctggatgtc acaacccaag cggaaatttt ggatttaatg
    12661 cacgacttac agcgtgatat gggaatggcg attatcttaa tttcccacga tttacgcttg
    12721 gtgcataaat acagtgactt agtctgcgta atgcaaaacg gcgaaattat tgagcgaggc
    12781 gaaacggaaa ctgtgttcac caatccgcaa catccttata cggtggagct acttaccccg
    12841 attccaacta atttaaaagg ggaattaccg ccaaatgcac caaccttgct tcagggtgag
    12901 catattaagg tagattatat tttaaaacgc tcgctattcg gtaagccgaa aaaggtgttt
    12961 aatgcgttaa aagatatttc attgcacttg aaaaccggcg aaacgctcgg cattgtaggc
    13021 gaatccggct ccgggaaatc tacccttggg cgtgccatta tgcagatttt agattatcgc
    13081 ggcaatatta catttgcagg taagacactg gctaatctga ataaagccga acgtcaagcc
    13141 ctgaaaaaag atatgcaaat ggtgttccaa gacccgttca actcactttc tcctcgctta
    13201 acagttgggg aaattattgc tgagggctta accgtacatt gccctcaaat gagcaaaacc
    13261 gaacggcggg aaaaagtaat gaaaatgttg gaagaggtta atctcaaccc tgcaatgatt
    13321 aaccgctatc cgcacgaatt ttcgggcgga caacgccagc ggattgcgat tgcaagggca
    13381 atcattttag agccgaaatt tgtattgctt gatgagccaa cctcagcact tgaccgctct
    13441 actcagatca ctgtaattga attgcttaac cgcttacaga aaaaatacgg cttaagttat
    13501 attttcatca gccacgattt ggcggtcatc aaggcactta gcgaccgagt gattgtaatg
    13561 agccaaggtg agattgtaga aagcggtgat gtcactcaaa tttttgaaaa tccacaacaa
    13621 gaatacacca agcggttgat tttagcctct aatttgtaac cccttccaca aggtcttatt
    13681 ctaccaaaaa acaagacctt g
//
LOCUS       DANLXD010000070        13657 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.070, whole genome shotgun sequence.
ACCESSION   DANLXD010000070 DANLXD010000000
VERSION     DANLXD010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13657
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.070"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            88..1809
                     /locus_tag="PXD18_001724"
     CDS             88..1809
                     /locus_tag="PXD18_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HDL6302137.1"
                     /translation="MKKLSGAEMIVQSLKDEGVEYVFGYPGGSVLDIYDAIHTLGLNH
                     VLVRHEQGAVHMADGYARSTGKVGCVLVTSGPGATNTITGILTAYTDSVPLVILSGQV
                     PSSLIGTDAFQESDMIGISRPVVKHSFLVKNTEEIPEIIKKAFYIASTGRPGPVVIDI
                     PKDVVNPLNKYPYEYPQEVSMRSYNPTVQGHKGQIKKALKALLVAKRPVLYVGGGVIS
                     AEGSPEITEFAQKLNLPVTCSLMGLGAYPASDKQYLGMLGMHGTFEANNAMHESDLIL
                     GIGVRFDDRTTNNLAKYCPNAKVIHVDIDPASISKTVQAYIPIVGSAKDVMEEFLSLL
                     GEENLAKNQVDLTAWWQQIDAWKARNCLAFEENSDVIKPQQVIRMIHKLTNGEAYVAS
                     DVGQHQMFAALHYGFDKPRRWINSGGAGTMGFGLPAAMGVKFAHPDATVVCVTGDGSI
                     QMNIQELSTAKQYDTPIVIVSLNNRFLGMVKQWQDIIYSGRHSQVYMNSLPNFAKLAE
                     AYGHVGIQIDHPSELEAKLTEAFSIKDKLVFVDVLVDETEHVYPMQVRGGAMNEMMLS
                     KTERTDA"
     gene            1802..2293
                     /gene="ilvN"
                     /locus_tag="PXD18_001725"
     CDS             1802..2293
                     /gene="ilvN"
                     /locus_tag="PXD18_001725"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005647229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HDL6302138.1"
                     /translation="MRRTLAVLLENESGALSRVVALFSQRGFNIESLTVAPTDDPSLS
                     RMTIVAQGEEQVLEQIEKQLHKLIDVFKVSNLSAYEHVEREVLLVKVRATGSSRDELK
                     RMVDIYRGQIVDLTPKLYTIQLSGSTEKLNAFIEAVKEETTIVEIVRSGVISLSRGDK
                     NAL"
     gene            complement(2372..3259)
                     /locus_tag="PXD18_001726"
     CDS             complement(2372..3259)
                     /locus_tag="PXD18_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6302139.1"
                     /translation="MKKHQPIKGAMAIITAGVLFACINTLIPKLTSISPIDSNVIALV
                     QYLAAFIFLVPSMNNIGFFSSLKTEHFGQHCFRIFLSAIGIQCWTMALANQLPIWQGI
                     ALLMTSPLFVTIGSGLFLKEKVDKKRWIATAMGFVGAMIILEPWSDHFEMIALLPIAA
                     AFFWAGYSLMVKKLSRYDSPTTMVAYLFILITPFNLLIALTNLSPSGFSLPSWSDFGF
                     LILLGFFTALAQLAVAKAYSVADASYIQPFDFIKLPLNVLAGWLVFNWVPPGKLWLGA
                     AIIIAATIYITHAETKQSN"
     gene            complement(3313..4629)
                     /gene="argA"
                     /locus_tag="PXD18_001727"
     CDS             complement(3313..4629)
                     /gene="argA"
                     /locus_tag="PXD18_001727"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HDL6302140.1"
                     /translation="MQNTELALAQWFRQSTPYVNMHRGKTFVIMLDGDVIESPNFVNI
                     INDISLLHSLNIKLVIVFGARPQINQLLKQNHIEPEYYHNIRVTNPQSLEYVKQAVGK
                     VHYDFFARLSLRLPHSEVINVVSGNMILAQPIGVVDGVDYTLSGKIRRINIESIKQQL
                     AQNSIVLLGPIAPSVTGEMFNLPFEDIATQVAIKLRADKLIGFCEEQGILDENGKPIP
                     DYLPQDGETLLQQLIERGEYHTPKARFLQAAITVCREGVKRSHLLSYKEDGSLLQELF
                     SRDGIGTQFSMESSEQVRIANSSDIPGLLDLIRPLEQQGILVKRSREQLEMEITNYTI
                     IERDGVVIACAALNPYPEEKMAEMACVAVHPDYRDSSRGDILLENIQKRAVQLGMEKL
                     FVLTTRTTQWFQERGFRLAGAQDLPRYKRENYNYQRRSKVLILPLW"
     gene            complement(4758..4943)
                     /locus_tag="PXD18_001728"
     CDS             complement(4758..4943)
                     /locus_tag="PXD18_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1508 domain-containing protein"
                     /protein_id="HDL6302141.1"
                     /translation="MYFEIYKDAKEEFRWRLKAGNHEVIATNQAYTTKQGCQKGIEAV
                     KKVTPETEVKDLTKAEA"
     gene            complement(5059..6381)
                     /gene="pepP"
                     /locus_tag="PXD18_001729"
     CDS             complement(5059..6381)
                     /gene="pepP"
                     /locus_tag="PXD18_001729"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HDL6302142.1"
                     /translation="MDLAYLAKMPQEEFTARRERVLEQMQDNSALLVFTESEKRRNSD
                     SEYLFRPDSYFWYLTGLAEPKSAVLLVKSEGKTESIIFVRKKDPLMETWNGRRLGIEE
                     APKTLQLNAAFDIDDIETVLAKKLENLTACYCALGIQEWGDNILFATFEKMKVNRQKV
                     PTTLIDWQPMLSEMRLIKSEFEIALIQQACHISSMAHIRAMKQARPNRYEWEIEGEIQ
                     HEFSRFGARFPAYNSIVAGGENACILHYNENDQVLKGGDLLLIDAGAEFAYYAGDITR
                     TFPINGKFSEPQKELYELTLTMQKEAINLLVPNSSIKAANDKAVQILTQGLVRLGILN
                     GDVESLIEQKAYRQFYMHGLGHWLGLDVHDVGDYGTERDRPLQIGMVLTVEPGIYIPK
                     DADVPEQYKGIGIRIEDNLLITEYGNKNLSSGCPKEIADVEQLMQSLN"
     gene            6597..6920
                     /locus_tag="PXD18_001730"
     CDS             6597..6920
                     /locus_tag="PXD18_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6302143.1"
                     /translation="MKLSSELQNQINQLNQLRKQALKQEQDEQKLFEKNKIEDLPHFG
                     TQLNAQRKLLGIELTTLEMQTGISSSTLKRLFKDPSQVKFQTICIVAETLGFNLCAIN
                     THKQE"
     gene            complement(6997..8015)
                     /gene="glpX"
                     /locus_tag="PXD18_001731"
                     /pseudo
     CDS             complement(6997..8015)
                     /gene="glpX"
                     /locus_tag="PXD18_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484632.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
     gene            8212..8430
                     /gene="zapB"
                     /locus_tag="PXD18_001732"
     CDS             8212..8430
                     /gene="zapB"
                     /locus_tag="PXD18_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011201404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapB"
                     /protein_id="HDL6302144.1"
                     /translation="MSLSVLDQLEEKIKQAVETIQLLQLEVEELKGKNDAAKQENDTL
                     RSEYEQLKVEQQNFQDRLRSLLGQIDNV"
     gene            8486..9067
                     /locus_tag="PXD18_001733"
     CDS             8486..9067
                     /locus_tag="PXD18_001733"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014064645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HDL6302145.1"
                     /translation="MAKLYFYYSSMNAGKSTTLLQSSYNYQERGMNTLVYTAAIDDRF
                     GVGKVNSRIGISQEANLFTADTNLFAEIKALHSNKALHCILIDEAQFLTKTQVYQLSD
                     VVDKLKIPVLCYGLRTDFQAELFEGSKYLLAWADELEELKTICDCGKKAHFVVRLNEK
                     GEAIKDGEQIQIGGNDRYLSVCRYHYKQKLGKL"
     gene            complement(9158..10276)
                     /locus_tag="PXD18_001734"
     CDS             complement(9158..10276)
                     /locus_tag="PXD18_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HDL6302146.1"
                     /translation="MTTTYFHLMAKPSSFHCNIQCEYCFYLSKEQTIPPEKSQFMNDE
                     TLQNYIRHYIEANQSQRVDFVWQGGEPTLLGLDFYKQAVKYQQKFANGKQITNAIQTN
                     GIALNRQWASFFKENHFLVGLSIDGLSDIHDRYRISTNGKPTFERVKSAVDLLKEVGV
                     EFNTLTVVNDRNWQRGRETYQALKALGSRYMQFIPVVESHKGELQPFSVPPQGYGQFL
                     VDVFHEWLPDRGQIFVIEFDNLLGQWLGYPSNNCVFRPTCGSSLVVEACGDVYSCDHF
                     VYPDYHIGNLNQQQLAEIVSSAAQRQFGQNKQAKLSQACLNCKFRILCHGGCPKHRIV
                     PQANSENHNYLCPSYQQFFAETSSVMRQMSEQIRFAGK"
     gene            complement(10366..11814)
                     /locus_tag="PXD18_001735"
     CDS             complement(10366..11814)
                     /locus_tag="PXD18_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HDL6302147.1"
                     /translation="MNNIIYILLDQVRKDMLGTYGHQVVKTPNLDRLAKDGIRFNNAF
                     TPASVCGPARTSLFTGLMPSSHGIIKNGEKGGTGEIPQQNPNIAGVEGYNSFVIGKWH
                     VGTKSVPEDYGIAGHNFDGYGYPGSQVYKNLVFNQPPTHSNRYREWLAEKGYDAPEVS
                     RAYFGDNPHLRVQELCGLLSGSREQTIEWFIIDEAKKYIQASLDEKKPFFAWINFWGP
                     HTPCVVPEPYYSMYDPSQVVLDESFFKPLEGKPNHFRTISQMWGMWEASEDRWKEVIS
                     KFWGYITLIDDAIGELFRFLEENNLYENTFLVATADHGDAMGAHKMIEKGEFMFETTY
                     NIPLIIKDPHSTRVNEVDDNLVYLHDLTSTVYDVANQPIPTAFQGESILPITRQSQNN
                     DRKGLLCQLAGHFVYFEQRMWRRKDYKLVFNATDRCELYDVRKDPEEMHNLFYDEAYQ
                     AVKKEMLEEMRQEMKRLNDPLENWVYRIIDEI"
     gene            complement(11961..>13657)
                     /locus_tag="PXD18_001736"
     CDS             complement(11961..>13657)
                     /locus_tag="PXD18_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="solute:sodium symporter family transporter"
                     /protein_id="HDL6302148.1"
                     /translation="LLTIITFLVVTGLVGYISWLKTRNDDLSTSKGYFLAGRGLSATV
                     IGCSMVLTSLSTEQLIGVNANSYAGNFSIIAWTVPAVIPLCFLALYLLPKYIRNGYTT
                     IPEFFENRFDRQTRLIMSGLFLVFYLFIVIPTALYTGAIAFNKIFNLETAFGLSYGAA
                     ITYTVIAIGIVGAIYAIFGGLKAVAVSDTWNAVLLVIGALLVPVFALIYLGNGSMAEG
                     VKIITTTHVEKWNAVGSATDAVPWPTIFTGIMVVHFFYWTTNQAIVQRALGARDLKAG
                     QKGILIAALFLLLLPLILNLPGLLSFHILGEGLKPIDVSYPELVNKTFPTVLQGFFIA
                     ALFGAILSTFNSFLNSAATIYCKDLLPSISKKQFTDAELISYAKKVSAVMAVITMIFG
                     PLLMFGTDGIFLLTKRFAGFVNIPIVALFVIGLFNKTVSGKAARIALLAHVILYFCIV
                     WVFDVKINFVYVQAGLFVFDVALMLILGIFLKRATPYEDNKINHANVDLTSWEYAPLA
                     VASIVLGLFTLYAFLSPLGLASPDGNPAMVLAVYAVLQAVVCVVFFAKCKGKKAVN"
BASE COUNT         4012 a         2967 c         2804 g         3874 t
ORIGIN      
        1 cccataataa gaactagaca tcaataaaat tttactgcaa aatccaacca tcttagagaa
       61 gaaaatgcta ttttgttgga ggattcaatg aaaaaacttt ctggtgcaga aatgattgta
      121 cagtccttaa aggatgaagg cgtagaatac gttttcggct atccgggtgg ctctgtactc
      181 gatatttatg atgcaattca tacacttgga ttgaatcacg ttttagttcg acacgagcaa
      241 ggtgctgtac atatggctga tggctatgcc cgttcaacag gtaaagtcgg ctgtgtgcta
      301 gtgacttcag gtccgggagc aacgaataca attactggta ttttaactgc ttataccgac
      361 tctgttccgt tagtaatact gtcgggccaa gttccatcaa gtttaattgg gacagatgca
      421 ttccaagaaa gtgatatgat cggcatttct cgtccggttg taaaacacag tttcttagta
      481 aaaaatacag aagaaattcc tgaaattatc aaaaaagcct tttatattgc atcaaccggt
      541 cgaccaggcc cggtagttat tgatattcct aaagatgtag tcaatccatt aaataaatat
      601 ccctatgaat atccgcaaga agtatcaatg cgttcttata acccaacagt tcaagggcat
      661 aaagggcaaa ttaaaaaagc attaaaagca ctattagtag caaaacgtcc agtgctttat
      721 gtaggcggtg gtgtaattag tgcagagggt tcgccagaaa ttacagagtt tgcacaaaag
      781 ctaaatctac ctgtaacctg ttcattaatg ggattaggtg cttatcctgc ctctgataag
      841 caatatttag gtatgttagg catgcacggc acttttgagg caaataatgc aatgcacgaa
      901 agtgatttga ttttaggtat tggggtacgt tttgatgatc gtacaacaaa taacttagca
      961 aaatattgcc cgaatgcaaa agtgatccac gtggatattg atccagcctc aatttccaaa
     1021 acagtacaag cttatattcc aattgtaggc agtgctaagg atgtaatgga agaattttta
     1081 tctttattag gtgaggaaaa tcttgcaaaa aatcaggtag atttaaccgc ttggtggcaa
     1141 caaattgatg cttggaaagc tcgtaattgc ttagcctttg aagaaaacag tgatgtgatt
     1201 aagccacaac aagtgattag aatgatccac aagttgacca atggggaggc ttatgttgcc
     1261 tcagatgttg gacaacatca aatgtttgct gcattgcatt atgggttcga taaaccacgt
     1321 cgttggatta attcaggcgg tgcaggcaca atgggctttg gcttacctgc tgcgatgggg
     1381 gtaaaatttg cccaccctga tgccactgtt gtttgtgtaa ccggtgatgg tagtatccaa
     1441 atgaatatcc aggaactttc caccgcaaag caatacgaca caccgattgt gattgtcagc
     1501 ttaaataacc gtttcttagg tatggtgaaa cagtggcaag atattattta ctctggccgc
     1561 cattcacagg tgtatatgaa ttctctacct aactttgcta aattagcaga ggcttatggc
     1621 cacgttggga ttcaaatcga ccacccttct gaattggagg caaaattaac tgaggcattc
     1681 tcaattaaag ataagcttgt atttgttgat gtattggtcg atgaaacgga acatgtttac
     1741 ccaatgcaag tgcgtggagg agcaatgaat gaaatgatgt taagtaaaac ggagagaaca
     1801 gatgcgtaga acattagccg tattattaga aaatgaatca ggtgcattat ctcgtgtagt
     1861 tgcccttttc tcgcagcgtg gttttaacat tgaaagcttg accgttgccc ctactgatga
     1921 tccaagcctt tcccgtatga caattgtcgc gcaaggcgaa gaacaggtgt tagaacaaat
     1981 cgaaaagcaa ctacacaaac tcattgatgt gtttaaagtg agtaacttaa gtgcttatga
     2041 acacgttgag cgtgaagtgt tattggtaaa agtgcgagct acaggttcat ctcgtgatga
     2101 actgaaacgt atggtagata tttaccgtgg gcaaatcgta gatttaacac cgaaacttta
     2161 caccattcaa ttatccggtt ctaccgagaa gctcaatgca tttattgagg cagttaaaga
     2221 agaaacaacg attgtagaga ttgttcgctc tggcgtgatt agtctatctc gtggcgataa
     2281 aaacgctctg taagcggtca attttagctt aaaatttgca aatcccttta tctttgagat
     2341 aaagggattt ttatgtagcg tgaatttgtt gctaattact ctgtttagtt tcagcgtgag
     2401 taatataaat ggtcgcagca ataataatcg cagctcctag ccataattta cccggtggca
     2461 cccagttaaa tacaagccaa ccggctaata cgttcaaagg taatttaata aaatcaaacg
     2521 gctgaatgta ggaagcatct gctacactgt aggctttggc taccgccagt tgcgctaacg
     2581 ccgtaaagaa accaagtaag attaaaaagc cgaaatcgct ccaagaaggc agactaaacc
     2641 cactagggct aaggttcgtg agtgcaatca acaaattaaa aggcgtaatt agaataaaca
     2701 ggtaagcgac catcgtagtt gggctatcgt aacgagagag ttttttcacc attagcgaat
     2761 aacctgccca gaaaaaagcc gcggcaatcg gcagtaacgc aatcatttca aaatgatcgc
     2821 tccaaggctc tagaataatc atcgccccaa caaaccccat tgcggttgca atccaacgct
     2881 ttttatccac tttctctttc aaaaacagac cggagccgat ggtcacaaac aatggagaag
     2941 tcatcaataa cgcaattccc tgccaaatag gtaattggtt agcgagtgcc attgtccaac
     3001 attgaatacc aatcgcagat agaaaaatac ggaaacagtg ttgcccaaaa tgctcggttt
     3061 ttaatgaaga gaagaaaccg atattattca tgctgggaac gaggaaaata aaggcagcta
     3121 aatattgcac caatgcaatc acgttcgagt caatcggtga aatggacgtt aatttgggaa
     3181 ttaaggtatt gatacaggca aataacacac cggcagtaat aattgccata gcccctttga
     3241 tgggttgatg ttttttcata gttctccttt tatagttctc ttggtaacaa gcggtcaaaa
     3301 acattgaata ttttaccaaa gtggtaaaat taatacttta gaacgacgtt gataattgta
     3361 attttcccgt ttatagcgag gtaaatcttg ggcacctgcc agcctaaatc ctcgctcttg
     3421 gaaccattgt gtggttcttg tagtcagcac aaagagtttc tccattccca gttgcactgc
     3481 ccgtttttga atattttcca gtagaatatc ccctcttgag gaatcacgat aatcagggtg
     3541 aaccgccaca cacgccattt ccgccatttt ttcttccgga tacgggttaa gtgccgcaca
     3601 agcaatcacc acaccatcac gctcaataat ggtgtagttt gtgatttcca tttctaattg
     3661 ttctcgagag cgtttgacta aaatgccctg ctgttcaagt gggcggatta aatccaataa
     3721 tcccggaata tcactggaat tagcaatacg tacctgttcc gagctttcca ttgagaactg
     3781 tgtgccaata ccatcacgag agaataactc ttgaagcaat gagccatctt ctttatagct
     3841 taataaatgc gagcgtttca ctccctctcg gcataccgtg atcgccgcct gcaaaaaccg
     3901 agctttcggg gtgtgatatt cgccacgctc gattaactgc tgtaacaagg tttcgccatc
     3961 ttgcggaaga taatctggaa ttggcttgcc gttttcatct aaaatcccct gctcttcaca
     4021 aaaaccgatt aatttatcgg cacgaagttt aattgcaacc tgtgtggcaa tatcttcaaa
     4081 cggcagatta aacatttcac cggtaacaga cggggcaatc ggaccaagta atacaatcga
     4141 attttgtgcc agttgctgct taatgctctc aatattaata cgacggattt taccgcttag
     4201 tgtataatct accccatcca ccacgccaat cggctgagct aaaatcatat taccactgac
     4261 tacattaatc acttcagaat ggggtaaacg caaagaaagg cgggcaaaga aatcataatg
     4321 aactttccct accgcttgtt tcacatattc tagcgattgt ggattagtca cacggatatt
     4381 gtggtaatac tccggctcaa tatgattttg ttttaacaat tggttaattt gcggtcttgc
     4441 cccaaataca atcactaatt tgatattcag gctgtgcagg agactgatgt cattgataat
     4501 attgacaaaa ttcgggcttt cgataacatc gccatcaagc ataatcacaa aggttttgcc
     4561 tctgtgcata ttaacataag gtgtagattg cctaaaccat tgagctaatg cgagttctgt
     4621 gttttgcata tatttcctct ttataatata aacgcatatt atctttttta gaaaaatccg
     4681 caagccttaa attgaataat taagcattat atttgcataa ataacaaagc cctgaaataa
     4741 tatcagggct ttatagatta tgcttcagct ttggttaaat cttttacttc tgtttcaggt
     4801 gtaacttttt taactgcttc aatgcctttt tgacaacctt gcttagtcgt ataagcttgg
     4861 ttggttgcaa taacttcgtg gttacccgct tttaaacgcc aacgaaattc ttcttttgca
     4921 tctttgtaaa tttcaaaata catataaaca ctccttcgtg ttgtgattgc ccaaacactg
     4981 tgtttgtgtc gggttagctt aagctaaatt ccccaaaata tcaaagcaag cggtcatttt
     5041 tttacaaaaa tttgcgaatt aatttaacga ttgcatcaac tgctcaacat ccgcaatttc
     5101 tttagggcaa ccgctgctta agtttttgtt gccgtattcg gtaatcagca aattatcttc
     5161 aatccgaatc ccaatacctt tatattgctc cggtacatcc gcatctttag gaatatagat
     5221 accgggttca acagttaaca ccataccaat ctgcaaagga cgatcccgct ccgtgccgta
     5281 atcccccaca tcgtgaacat ctagccctag ccaatgccct aatccgtgca tataaaattg
     5341 gcgataggct ttttgctcaa tcaggctttc cacatcaccg tttaaaattc ctaagcgaac
     5401 caagccctgc gtgagaatct gtacagcctt atcatttgcc gctttaatcg agctgtttgg
     5461 cacaagaaga ttaatcgcct ctttttgcat agttaaggtt aattcgtaca gctctttttg
     5521 cggttcggag aatttcccat taatagggaa ggttcgggta atatcgccgg cgtaatacgc
     5581 aaattccgcc cctgcatcaa tcagtaataa atcgccgcct ttaagcacct gatcattttc
     5641 attgtagtga agaatacagg cattctcacc gccggcaacg attgaattat atgccggaaa
     5701 ccttgctcca aaacggctaa attcgtgttg aatttccccc tcaatttccc actcataacg
     5761 attcgggcga gcttgtttca tcgctcgaat atgtgccatt gaagaaatat gacacgcctg
     5821 ctgaattaag gcaatttcaa attctgattt aatcaaccgc atttccgata acattggctg
     5881 ccaatcaatc aaggttgtcg gcactttttg ccgattgact ttcatttttt caaatgttgc
     5941 aaacaaaata ttatcgcccc actcttgtat ccctaacgca caataacaag cggtcagatt
     6001 ttctaatttt tttgcaagaa cggtttcaat gtcatcaata tcaaaagctg cgttaagctg
     6061 taacgttttt ggagcttcct caatccctaa acgtctgcca ttccaggttt ccattaaagg
     6121 gtctttttta cgcacaaaaa taatactttc cgttttacct tcgcttttta ccagcaatac
     6181 ggctgattta ggttctgcca aaccggttaa ataccaaaag taactatcag gtctaaacaa
     6241 gtattcagag tcactattac ggcgtttttc cgattcggta aaaaccaata acgcagaatt
     6301 atcctgcatt tgctcaagca cacgctcacg gcgtgcggta aattcttctt gtggcatttt
     6361 agccaaataa gcgagatcca ttatttctcc tttttattat atctatatcg aaacctgcct
     6421 tattttagca caaacgcagc ataaattcag cctaaccaaa acagatgaaa gattatattt
     6481 gagatcttga ttgcaaaaac aaaacagatt aagattaaat ataaccttta catatctaaa
     6541 caggttatat ttaacctatg aacacataaa taatctactt ttagctcaaa aataaaatga
     6601 aactatcaag cgaactacaa aatcagataa accaactaaa tcagttacga aaacaggcac
     6661 tcaaacaaga gcaagacgag cagaaattgt ttgaaaaaaa taaaattgaa gatttgccac
     6721 attttggcac gcagcttaat gctcagagga aactattagg catagaatta accacccttg
     6781 aaatgcaaac cggcatttca agctctaccc taaaacgctt atttaaagac ccaagccaag
     6841 tgaaatttca gacaatttgt attgtggcag aaacactcgg ctttaattta tgtgcaatta
     6901 atactcacaa acaagagtaa gcgtgacaat gtagtgattt tgattacttt gggaagacaa
     6961 aaaatcgggc taaaagcccg atttatcaga gaaaagctat aaatccaata aagaaaggag
     7021 ttcgttatct ttacgatcga cataatggtc ggattgaatt ttacgaatgg ttctagattt
     7081 gccacgaata agtaaggttt cagtgctggc aatattgcct ctacgtttaa tcccttttaa
     7141 caattcacct gaagtaatgc cggttgcaac aaagacgata ttgtcatcac gcaccaaatc
     7201 ttctaatttc aacaccgtat tcaccggtac attcatttca ttacagcgta aaagctcttt
     7261 ttcggtagca gttaaatttt ccgggctatt ccccttcact tggttgcgag gaattaaacg
     7321 tgcttgcata tcgccaccca atgcacgaac cgcagccccc gccactaccc cttcaggtgc
     7381 tccgccgata ccataaagca gatccaattc gctctctggc aaacagcatt gcaccgcagc
     7441 cgcaacatcg ccatcaggaa tcgcaatcac tcttacccct aatttttgca catcggcaat
     7501 tattttttcg tggcgaggct tagcaagata gcaatggtta attgggaaag taatttgccc
     7561 tttttcgagg cgacacggcg aagattttgt tcaagcggaa gatttaaatc aatcattcct
     7621 ttgcattcct gccccaccac taatttttcc atatacatat caggggcttt taaaaaggtt
     7681 tctttgccgc ctgctgctaa taccgacaac gcatttgcct gccccattgc agtcatacga
     7741 gtaccgtcaa tcgggtcaac cgcaatactg atttcctcat cttctaggcg ggatagaccg
     7801 attttctcgc caatataaag catcggtgct tcgtcaattt cgccctcacc aattaccact
     7861 tcgccacgga tttccatttg gttcagcata aaccgcattg ctttcaccgc agcttcatca
     7921 gcggcatttt tatccccacg gcctagccaa gagtaagctg ctagagccgc tgcttccgta
     7981 acacgagaaa attcaaaaga aagagttcgt ttcatttttg ttccttagtt tcttgaaaga
     8041 aaaactttaa aagaagagag attatatttt atcagtaacc tgcaagctac gttactaaaa
     8101 aatcagcgtt tgaataaaaa ttcacaaata gccaaacttt tttataaaaa taaagtcaga
     8161 tttagagtat aatctttaca agtttttata ttattttaga gggaatttac tatgtcatta
     8221 tcggttttag accaattaga agaaaaaatt aaacaagctg ttgaaactat tcaattactt
     8281 caattagaag ttgaagaatt aaaaggtaaa aacgatgcag cgaaacaaga aaacgacacc
     8341 ttgcgcagcg aatatgaaca attaaaagtg gaacaacaaa acttccaaga tcgtttacgt
     8401 tcacttttag gtcaaatcga caacgtttaa ttctattttc agcacaaacg gctaaatttt
     8461 tagccgtttt ttatttgtta cagctatggc aaaactctat ttttactact cctcaatgaa
     8521 tgcaggcaaa tctactactc tgcttcaatc ttcttataat taccaagaac gtggaatgaa
     8581 cactttagtt tataccgccg ctattgatga ccgtttcggt gtggggaaag tcaactctcg
     8641 tatcggtatt tcacaagaag ccaatttatt taccgctgat accaatctat ttgcggaaat
     8701 taaggcatta cactcaaaca aagcgttaca ctgtatcttg attgatgagg ctcagttttt
     8761 aactaaaaca caggtttatc aattaagtga tgtggtcgat aaactcaaaa ttccggtgct
     8821 ttgctacggg ctacgcaccg atttccaagc tgaattattt gaaggtagca aatatttgtt
     8881 ggcttgggca gatgagctgg aagaactcaa aaccatctgt gattgtggca aaaaagccca
     8941 ttttgtcgtt cgattaaatg aaaaaggcga agccattaaa gacggtgaac aaatacaaat
     9001 cggcggcaat gatagatatc tctctgtttg ccgttatcat tacaaacaaa agttaggtaa
     9061 gctataagct acaagaagca gcaagcggtt aaattttcgg gaatttttgc aaattttcag
     9121 cgaaatttaa ccgcttgttt gtgttattta cctctcttta ctttcctgca aaccgaattt
     9181 gctcactcat ttgtctcatc acactcgaag tctcggcaaa aaactgttgg taagaggggc
     9241 aaaggtagtt gtggttttcg ctgtttgctt gggggacgat gcggtgtttg gggcagccgc
     9301 cgtggcaaag tatgcggaat ttgcagttta ggcaggcttg cgagagtttt gcctgtttat
     9361 tctgcccgaa ttggcgttgg gcggctgatg agacgatctc tgccagctgc tgttggttga
     9421 ggttgccgat gtggtaatcg ggatagacga aatggtcgca actgtacaca tcgccacagg
     9481 cttccaccac cagcgagctg ccacaggtcg ggcggaatac acagttgttg gagggatagc
     9541 caagccattg cccgagcagg ttatcaaact cgatcacaaa aatctgccca cggtcaggca
     9601 gccattcgtg aaaaacatcc actaaaaatt gcccgtagcc ttggggcgga acggaaaagg
     9661 gttgtaattc ccccttgtgg ctttccacca ccggaatgaa ctgcatataa cggctaccga
     9721 gggctttgag ggcttgatag gtttctctgc cccgttgcca gttgcggtcg ttcaccaccg
     9781 tgagggtgtt aaattccacg ccaacctctt tcaataaatc gaccgcactt ttcacccgtt
     9841 caaaggtcgg tttaccgttg gtggaaatgc ggtagcggtc gtgaatgtcg ctcagtccgt
     9901 caatggataa gcccaccaga aaatgattct ctttgaaaaa gctcgcccac tggcggttta
     9961 gggcaatgcc gttggtttgg attgcgttgg tgatctgctt gccgtttgca aatttttgtt
    10021 gatatttgac cgcttgtttg tagaaatcta agcccagcag ggtcggctcg cccccctgcc
    10081 acacaaaatc cacccgttgg ctttggttgg cttcaatgta atgacgaatg tagttttgca
    10141 gcgtttcatc gttcataaac tgcgattttt ctggcggaat ggtctgttcc ttgctcagat
    10201 aaaaacagta ctcgcactga atattacagt gaaaactgct gggttttgcc attaggtgga
    10261 agtaggtggt ggtcattgta tctctaaatt gtaggggcgg actttatgtt cgcccattgt
    10321 ttacattaat tttcgggcgg gtataaaacc cgcctctaca aacaattata tctcatcaat
    10381 aatccgatac acccaatttt ccagtgggtc gttgaggcgt ttcatttcct gtcgcatttc
    10441 ttccaacatc tcttttttca cggcttggta ggcttcgtca taaaagaggt tgtgcatctc
    10501 ttcggggtct tttctgacat cgtagagttc gcagcggtcg gtggcgttga agaccaattt
    10561 gtaatcctta cgccgccaca ttcgctgttc aaaatagaca aaatgccctg ccagttggca
    10621 caacaagcct ttgcggtcgt tgttttggct ttgtctggtt atcggcagaa tactctcgcc
    10681 ttggaaagcg gtcgggatcg gttgatttgc cacatcatac acggtggaag tgagatcgtg
    10741 caaataaacg aggttgtcat cgacttcgtt cacccttgta gagtgcggat ctttaataat
    10801 cagcggaatg ttgtaggtgg tttcaaacat aaactcgcct ttttcgatca tcttatgcgc
    10861 ccccatcgca tcgccgtggt cggcggtagc aacgaggaag gtattttcat agagattgtt
    10921 ctcttccaag aaacggaaca gctcgccaat ggcatcgtca atcagcgtga tgtagcccca
    10981 gaatttagaa atcacctctt tccaacgatc ttcgctcgcc tcccacattc cccacatttg
    11041 tgaaatggtg cggaagtggt tcggtttgcc ctcaagcggt ttgaagaaac tctcgtccaa
    11101 taccacttgg cttgggtcat acattgaata atacggctcc ggcactacac acggagtgtg
    11161 cggcccccag aagttgatcc acgcaaagaa cggttttttc tcatcaaggg aggcttgaat
    11221 gtattttttc gcctcgtcaa tgataaacca ctctattgtc tgctcgcgac tgccggaaag
    11281 caaaccacag agttcctgca cacgcaggtg tggattgtcg ccaaaatagg ctcgactgac
    11341 ttcgggtgcg tcatagccct tttccgccag ccattcacga taacggttgg agtgtgttgg
    11401 cggctgatta aacacgaggt ttttatacac ttggctgccc gggtagccat agccgtcaaa
    11461 gttatgaccg gcgatgccat aatcttcggg aacggatttt gtaccaacgt gccatttgcc
    11521 gatcacaaag gagttatagc cctccacgcc ggcaatatta gggttttgtt gtggaatttc
    11581 gcctgtgccg cctttttcgc cgtttttgat aatcccgtgg ctggacggca ttaagccggt
    11641 aaacagcgag gtgcgagccg gcccgcagac cgaagccggc gtaaaggcgt tgttaaaccg
    11701 aatgccgtct ttcgccaagc gatccaaatt cggggttttt accacctgat gcccgtaagt
    11761 gccgagcata tctttacgca cttgatctaa caaaatatag atgatgttat tcataatgac
    11821 ctctttaagg cttgttaata accgataaat tatcaagttt cggagatctg ttcccctctt
    11881 tagcaaagag gggatttttg atctcgagcc ttttccgttc ttggtatttt tatactaatg
    11941 aggagaaggc tcacattcat ttaattcacc gcctttttgc ctttacattt tgcaaaaaac
    12001 acgacacaaa ccaccgcttg tagcacagca tacaccgcca gcaccattgc cggattgccg
    12061 tctggtgagg ctaaaccgag cggagagagg aaagcgtata gcgtgaataa gcccaacacg
    12121 atagaagcca ctgccagtgg ggcatattcc cagctggtta agtccacatt ggcgtggttg
    12181 attttgttgt cttcgtatgg agtcgcacgt tttaggaaaa ttcctaaaat cagcattaac
    12241 gccacatcga acacgaacaa gccagcttgc acatacacga agttgatttt tacatcaaac
    12301 acccaaacga tgcagaagta gagaataacg tgtgcgagta aggcaatgcg tgcggctttg
    12361 cctgagacgg ttttgttgaa taagccgatg acaaacagtg ccacaatcgg aatgttcaca
    12421 aaaccggcga aacgtttggt cagcaagaaa ataccgtctg tgccgaacat cagtaacggc
    12481 ccaaagatca tcgtaatcac cgccattacc gcagagactt ttttcgcata acttatcagt
    12541 tccgcatctg tgaactgttt tttgctgata gacggcagta agtctttaca gtaaatggtt
    12601 gccgctgagt ttaagaacga gttgaaggta ctcaaaatcg ccccgaacag tgcggcaata
    12661 aagaagcctt gtagcacggt tgggaaagtt ttattcacta attcagggta agacacatca
    12721 atcggtttca agccctcacc taaaatatgg aaactgagta agcccggtaa gtttaagata
    12781 agcggtagca ataataagaa cagtgccgca attaagatcc ctttttgacc ggcttttaag
    12841 tctctcgccc ccaaggcacg ttgcacaatg gcttggttgg tcgtccagta gaagaaatgc
    12901 accaccataa taccggtgaa aatggtcggc caaggcactg catcggtggc actacccacc
    12961 gcattccatt tttcaacgtg agtagtggtg atgattttca ccccttctgc catactgcca
    13021 ttacctaaat agataagtgc aaacaccggc actaataatg ccccaatgac taacaagacc
    13081 gcattccaag tgtctgacac cgccaccgct tttaagccac cgaaaatggc ataaatcgcc
    13141 ccaacaatac caatcgcaat caccgtatag gtaatcgctg ccccatagct taagccgaag
    13201 gcagtttcaa ggttgaagat tttattgaag gcaatcgcac cggtgtaaag tgcagtcgga
    13261 atgacgatga aaagatagaa caccaaaaac aagcccgaca taatcaaacg ggtttggcgg
    13321 tcgaaacggt tttcaaagaa ctccggaatg gtggtataac cgttgcggat atatttcggc
    13381 aacagataaa gtgccaagaa gcaaagcgga attaccgccg gcacagtcca cgcaataatt
    13441 gagaaattac cggcataaga gttggcattc acgccgataa gttgctcggt agaaagggag
    13501 gttaagacca tcgaacagcc gataaccgta gcactcaagc cacgccctgc caagaaataa
    13561 cctttagatg tcgaaagatc gtcgtttctg gtttttagcc aagagatata cccgactaat
    13621 ccagttacaa ccagaaaggt aattattgtt aataaca
//
LOCUS       DANLXD010000071        13639 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.071, whole genome shotgun sequence.
ACCESSION   DANLXD010000071 DANLXD010000000
VERSION     DANLXD010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13639)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13639)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13639
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.071"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            21..224
                     /locus_tag="PXD18_001737"
     CDS             21..224
                     /locus_tag="PXD18_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302149.1"
                     /translation="MTDTERLDFIAQRKLDVRYSDLVDEFIIASYTKPHEQYFHWARN
                     ADLRTAIDEAMKEMRGLNNATTN"
     gene            208..672
                     /locus_tag="PXD18_001738"
     CDS             208..672
                     /locus_tag="PXD18_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG-like family protein"
                     /protein_id="HDL6302150.1"
                     /translation="MQQLIKNIEQWAEDRNLINGSTPQKQMLKLMEEFGELCGGIARN
                     NPEMIKDAIGDLIVVCIIKAKQEKQPIYPVQFENHRLNGYRFDISVAVHCLYDIERIK
                     DRGKYSRFFGILHHLALINRFTLNDCLAHAYDQIKDRKGEMQAGIWVKEDDL"
     gene            complement(676..864)
                     /locus_tag="PXD18_001739"
     CDS             complement(676..864)
                     /locus_tag="PXD18_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302151.1"
                     /translation="MKELFKQWLINQDSPFINSCGVECILSKVDDRLNIINANEEETE
                     TLIEWRNAFLQDVSVFIA"
     gene            1056..1274
                     /locus_tag="PXD18_001740"
                     /pseudo
     CDS             1056..1274
                     /locus_tag="PXD18_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014390712.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
     gene            complement(1326..1541)
                     /locus_tag="PXD18_001741"
     CDS             complement(1326..1541)
                     /locus_tag="PXD18_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302152.1"
                     /translation="MQTEKRGRGRPKSGLTLQELQAKSDAKRGVRLKSFKFHEDFIAQ
                     LEQLAEQHGISQTQVIVQAVEQFSKGA"
     gene            2086..2787
                     /locus_tag="PXD18_001742"
     CDS             2086..2787
                     /locus_tag="PXD18_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302153.1"
                     /translation="MSTQISTQTISFNNQALITFEQNGTHYTAMKPICENIGLTWHAQ
                     YERIKRDEILSQGILIIRIPTNGGDQQMICLPIEYLNGWLFGIDINRCKPEIRETLIK
                     YKKECYQALHDYWFKGKAERSQIAPIVEPKIPMELTKKEWLRFASMWYALYNSLEVLA
                     TLEKPLRAIGSPFGATAYTHATEYQTTLGVMKRILEPMLADFEVDPFEEAHYHKALTT
                     LRQYQPKGLGGLVRI"
     gene            3041..3217
                     /locus_tag="PXD18_001743"
     CDS             3041..3217
                     /locus_tag="PXD18_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302154.1"
                     /translation="MTEEDKEYLQTKIENEGFEYAFVSYSDFEEVQDEKFHGLRKAYL
                     KARSELAEYIDIED"
     gene            3305..3688
                     /locus_tag="PXD18_001744"
     CDS             3305..3688
                     /locus_tag="PXD18_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302155.1"
                     /translation="MHIEDKIAWWLANGETGVSSKTMAFYLGYGIRPKIEGYPHDVSD
                     FRRCFLLLETVPFLRNRIEKMAELGKVWAALAKEWHTLEALYNEEEDQIRCPKTYAKL
                     REILEANEENVVRIGNVSISIGSTT"
     gene            3738..3959
                     /locus_tag="PXD18_001745"
     CDS             3738..3959
                     /locus_tag="PXD18_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HDL6302156.1"
                     /translation="MNIYTDFLSREEIEFITQCKQKNLIKKQLNIMGIPFKENANGFP
                     VVRRDYAQAKQRKPIATNDSDWVSNAFKA"
     gene            3981..5021
                     /locus_tag="PXD18_001746"
     CDS             3981..5021
                     /locus_tag="PXD18_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6302157.1"
                     /translation="MARPRKYENNGLPQNLLCRRRKRANGSIVEYYFYVLADGKERSL
                     GTNKHEAILEAAKLNFENSRKSPIVLFIDVAKRYELEVVPTKKAKNTRQSNLQAIHWL
                     CKFFGNPPAPLEKIEPKHISQYLQWRKDTPAVANIEVGLFNTIWNMAREWGYTALPSP
                     SQGVKKFPTKYREVYVEDYILDKIYEFADERMADIIETAYLLGQRPIDICNIHRSHIY
                     DGILHITQQKTGKKVRFEISGRLKEILDKRLGYESDWIFTNKWGKKLKRRSLGDHFKE
                     IRERAMKAYPELADEIAKVQMRDMRAKAATDISLMTTDEQAQKQLGHTSKRMTHHYIR
                     KDKILKPTDEIT"
     gene            complement(5180..5467)
                     /gene="rplY"
                     /locus_tag="PXD18_001747"
     CDS             complement(5180..5467)
                     /gene="rplY"
                     /locus_tag="PXD18_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005625668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HDL6302158.1"
                     /translation="MSFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILD
                     HDKVNNAQVHDSFYNEVLTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRA"
     gene            complement(5619..6887)
                     /locus_tag="PXD18_001748"
     CDS             complement(5619..6887)
                     /locus_tag="PXD18_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme"
                     /protein_id="HDL6302159.1"
                     /translation="MSDLKQQALDFHEFPIPGKISVTPTKALDTQHDLALAYSPGVAE
                     PCLAIEKDPSASYRYTARGNLVAVISNGTAVLGLGNIGALASKPVMEGKGVLFKKFAG
                     IDVFDIEINETDPEKLVEIIASLEPTFGGINLEDIKAPECFYVEQKLRERMGIPVFHD
                     DQHGTAIITGAAVINGLQVVGKAISEVRLVVNGAGASAIACTNLLRSLGVKKENITMC
                     DSKGVIFQGRGDKMDETKQFYAIEDNGWRTLADAVANADVFLGCSKGGALTQEMVKTM
                     AKDLLILALANPVPEITPAEAKAVRPDAIVCTGRSDFKNQVNNVLCFPFLFRGALDVG
                     AKTINEEMKMAAAHAIAELAKEPVPFEVISTYGELSFGPEYIIPTPFDPRLIVNVSIG
                     VAKAAIQSGVATRPITDWEAYAEQLKKLVA"
     gene            complement(7044..7955)
                     /locus_tag="PXD18_001749"
     CDS             complement(7044..7955)
                     /locus_tag="PXD18_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family alpha-L-glutamate ligase"
                     /protein_id="HDL6302160.1"
                     /translation="MKWLMLCREPRLYSCCRIKAACEAKGIELDILDQNRMLLGLENG
                     EFKIYYQAGESYDNNRPEPVLLPNYDGILPRFGTGSTEMGCSVLRHFEAKGIPVLNHS
                     AAFALARDKWRTLQKLAKHNLPVPNTNFAGHLVSVKSQLNQFAFPLISKVLNGSQGNG
                     VMLFEGKNNAEAVLATFRQVNEPYLCQQFVGDAKGQDIRAFVIGNEVVAAMSRTSVTG
                     DFRANIHQGGTAQPIELTQMERALAIKATKTIGLDIAGVDFLRTEKGVVILEVNASPG
                     FEGIERVNDVDIASEMVSYFINKMKNA"
     gene            complement(7952..8671)
                     /gene="nfsA"
                     /locus_tag="PXD18_001750"
     CDS             complement(7952..8671)
                     /gene="nfsA"
                     /locus_tag="PXD18_001750"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NADPH nitroreductase"
                     /protein_id="HDL6302161.1"
                     /translation="MQSKPTLETILSHRSIRKFTEQPISEEIFQILIEAGKAASSSNH
                     LQCVTVIRVTDRQIRETLKAVSGMQYVVDCAEFLVFCIDFNKHKQLVPESQLEWAEVS
                     LIGAVDTGILAQNVFLAAESLGLGAVYIGALRNDIERVSKALNLPEYCVPLVGMCLGY
                     PAQEPAIKPRLPNSLVCYNNQYQDFDWTEFAKYNENLTAYYQARIGEPQQWQAAIHKT
                     LDKPVRPHILPFFNQKGLLKK"
     gene            complement(8683..9468)
                     /gene="mtgA"
                     /locus_tag="PXD18_001751"
     CDS             complement(8683..9468)
                     /gene="mtgA"
                     /locus_tag="PXD18_001751"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HDL6302162.1"
                     /translation="MEQSMAKRNKRFLSSLLKKIGLFFIPRKIKSKLGWLWFGSSRLL
                     TFGGTFFLIPILIFSVLPVPYSAYMVQKKVENLVQGKSYPIKKEWVSLNEISWQMQMA
                     VIASEDQKFESHFGIDLQAIETALKLNAKSKKVRGGSTISQQTVKNMFLWHGQSWLRK
                     GIEVPLTLLVENVWSKDRILEVYLNIAEFGNGIFGVEAAAKHFFKKSAKQLTLQESAL
                     LAASLPNPLVFRVDKPGPSMRKRQAWIMRQVSLLDGKNYLDKL"
     gene            complement(9443..9763)
                     /gene="trpR"
                     /locus_tag="PXD18_001752"
     CDS             complement(9443..9763)
                     /gene="trpR"
                     /locus_tag="PXD18_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon repressor"
                     /protein_id="HDL6302163.1"
                     /translation="MKTLYNQRDPNEWTQFLALLEQAVAEDKLEPFFSMFLTADERGS
                     LGLRLQIVQALLKGEDSQREIQQNLNTSAATITRGSNMLKTLDQDFLQWLNGKVNGTV
                     NGKA"
     gene            complement(9843..10484)
                     /gene="lolA"
                     /locus_tag="PXD18_001753"
     CDS             complement(9843..10484)
                     /gene="lolA"
                     /locus_tag="PXD18_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HDL6302164.1"
                     /translation="MKTLFKKSVFGLALFGLANVALADAQSVAELQRRLEQVSQYSAD
                     FDQTVRSSKGKQIQQGKGKFQVKRPNLFRMDTKSPQENLIVSDGKDLWFYDPFVSQVT
                     VNTVQDAVNNTPFVLLTSGDKSHWDQYDVSQSADTFVLKPKSKKSNLKQFDVRIDQSG
                     LLKGFSTIERDGQSNLYVLRNITTGGVSSDLFKFSVPKGAELDDQRGGKKSKK"
     gene            complement(10595..13453)
                     /gene="polA"
                     /locus_tag="PXD18_001754"
     CDS             complement(10595..13453)
                     /gene="polA"
                     /locus_tag="PXD18_001754"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HDL6302165.1"
                     /translation="MATIAKNPLVLVDGSSYLYRAFHAFPPLTNRLGEPTGAMYGVLN
                     MLKSLISQVNPSHIAVVFDAKGKTFRDELFKQYKSHRPPMPDDLRPQIEPLHRIIKAL
                     GIPLISIEGVEADDVIGTLAVQAAKDGKDVLISTGDKDMAQLVNDHIMLINTMNNTLL
                     DREGVIEKYGIPPELIIDFLALMGDSADNIPGVKGVGEKTALALLQGIGSLEQIYANL
                     DQIATLSFRGAKNFAPKLEAEKANADLSYLLATIKTDVELDVTHDQLLTQPQDRAELA
                     QLFEHYEFKRWLNEVNQNANPVTQTSAEKVPNNYQVTQAVRNEENVANVVEIDRSKYE
                     TVDTEQKLSAWIEKLTAARLIAVDTETDSLDAMSANLVGISFALENGEACYIPLGHKQ
                     KAQPQQADMFGDEERSESPSSDELVKNQLNLTACLSKLKPILLNPEIKKIGQNIKYDL
                     TIFANYGIELQGVAFDTMIESYTQNSTGRHNMDDLAARYLGHKTIPFEELAGKGKNQL
                     TFDKIEIAKAAEYAAEDADVTMKLHQVLWEKLQQEPELVKLFDEIEMPLVGVLSRIER
                     NGVLIDPKKLLTQSAEIEKRLEEVETLVHAEAGQTFNLASTKQLQEILFEKLGLPVLK
                     KTPKGAPSTNEEVLDELAQQGHLVPKLLMEHRGLSKLKSTYTDKLPQLINKKTGRVHT
                     SYNQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFVAREGYKIVAADYSQIELRIMA
                     HLSNDEGMINAFAEGKDIHRATAAEIFGVELGEVTSEQRRSAKAINFGLIYGMSSFGL
                     SNQLGIGRAEAQKYMDLYFQRYPAVQQFMTDIREVAVEKGYVETLFGRRLYLPDIKSG
                     NAILRKAAERVAINAPMQGTAADIIKVAMIGIDNAIRDNDEIKMIMQVHDELVFEVKA
                     DKIDHYSQLIKTEMEKAISLKVPLIAEVGVGENWDEAH"
BASE COUNT         4120 a         2991 c         2563 g         3965 t
ORIGIN      
        1 gaaccaccaa aggaggaaaa atgaccgaca ccgaacgctt agactttatc gcccaacgca
       61 aattagatgt ccgatattct gatttggtgg acgaatttat tattgctagc tataccaaac
      121 cgcacgagca gtattttcat tgggcaagaa atgccgattt acgcacggcg attgatgaag
      181 caatgaaaga aatgagagga ctaaacaatg caacaactaa ttaaaaacat cgaacaatgg
      241 gcggaagacc gcaatttaat taacggctca accccacaaa agcaaatgct caaactgatg
      301 gaagagtttg gcgaactctg cggaggcatt gcccgcaata atcctgaaat gattaaagat
      361 gcgattgggg atttgattgt tgtctgtatt attaaagcaa aacaagaaaa acaacctatt
      421 taccctgtac aatttgaaaa tcatagatta aatggttaca gatttgatat ttcggtcgct
      481 gttcattgtc tatatgatat tgaacgcatt aaagacagag gtaaatatag ccgttttttt
      541 ggcatattac accatttagc cttaataaat agatttacgc ttaatgactg cctcgctcac
      601 gcctacgacc aaatcaaaga tcgcaagggc gaaatgcaag ctgggatttg ggttaaagaa
      661 gacgatttat agtacctaag ctataaaaac cgaaacatct tgcagaaaag cattccgcca
      721 ctctataaga gtttcggttt cttcttcgtt ggcgttgatt atgtttagcc ggtcatcaac
      781 ttttgacaaa atacactcaa cgccacagct attaatgaat ggcgagtcct gattgattag
      841 ccattgtttg aaaagctctt tcatagtgtt ctccttatat ttttttatga gattactacg
      901 aaagcgtttt actgtcagaa caaaaattta ttttttcgat gcagatcgca aaaatagata
      961 ttgaggcttg acaccgccaa acttcggatt aagataaccg cactttcaag ccgtccacca
     1021 acggcttttt ttgtacctaa aaacggagaa acgaaatggc aaatagcgta atgattgtac
     1081 aaggcgtgga ggtcaaagta accgctcgtg atggtgagga ttacatcagc ctaactgata
     1141 tgtgcaaagc ttttggagac agcgaccagc tcattaaaaa ctggcttcaa aataaaaata
     1201 ccattgaatt tcttcaagtt tgggaagagc tgaataatcc aaattttaat ttggtggaat
     1261 tacaccaaat taaatgcaac aactaattaa aaacatcgaa cagtgaaggg taggtttata
     1321 ggggcttacg ccccttttga aaactgctca accgcttgaa cgattacctg tgtttgcgaa
     1381 atgccgtgtt gttctgcaag ctgttcaagt tgagcaataa aatcttcgtg gaacttgaat
     1441 gacttcaatc gcacaccacg ctttgcatcg ctttttgctt gtaattcttg aagcgttaaa
     1501 cctgatttag ggcgaccacg acctcgtttc tctgtttgca ttgtcaattc cttgttgatt
     1561 tttaatacgg aacgttatat tatttaggaa ctgcctagca gagatggcgt tctctgctag
     1621 gacttttagc tttctaatct aataagctgg cgtgcttatt aagattaaga tcactaggat
     1681 taacaactta agatacataa tccagttcct gatgtttgcc gctctcttca agggcggctt
     1741 cttcattttc agaccctttc cgaaaacaag attattttaa tacataccaa ataaaacgca
     1801 agctattttt tagtatttat taaaataatt ttatttgaca accgccaaac tttaacttac
     1861 tattccgccc aaggtgtcga aacctcatac tctaaggcgg atagttcact aatcgccact
     1921 aggcgatttt tttatatccg taatcctgac tatgtcggga gggcgactaa tacaagaccg
     1981 aaaggaaata cgtccagccc ttaccttaga gtgggttttc gaacctcccg acgccactgt
     2041 cgaaagtggc ttgttttaaa caaatagact ctaaggatta cgactatgtc aactcaaatt
     2101 tctactcaaa ccatttcttt caacaaccaa gccttaatca cattcgagca aaacggcaca
     2161 cattacaccg caatgaaacc gatctgcgaa aatatcggct tgacttggca cgctcaatac
     2221 gaacggatca aacgagatga aatcctttcg cagggtattc ttatcataag aatacctaca
     2281 aacggtggcg atcaacaaat gatctgcctc ccaattgaat acctcaacgg ctggctcttc
     2341 ggcattgaca tcaatcgctg caaacccgaa atcagagaaa cgctcatcaa atacaaaaaa
     2401 gagtgctacc aagccctgca cgattactgg ttcaagggca aagcggaacg ttcacaaatc
     2461 gccccgattg tcgaacctaa aatcccaatg gagctaacca aaaaagaatg gctacgtttc
     2521 gcttcaatgt ggtacgccct ctacaacagc cttgaagtac ttgctacgtt agaaaaaccg
     2581 ttgcgtgcta tcggttcgcc gtttggggca accgcctaca ctcacgccac cgagtatcaa
     2641 accacgcttg gcgtaatgaa acggatactt gaaccgatgt tagccgactt cgaggtcgat
     2701 ccgtttgaag aagctcacta ccacaaagcc ctaactacct taaggcaata ccagccgaaa
     2761 ggcttaggcg gcttagtccg aatttaattt gcaaaaaaat cacacaatcc gaccgcttgt
     2821 gaaacatcaa gcggcggttt cctgcaccca aaattcaagg attaggcgat gaaatacgca
     2881 aaaatcatac tctttttaac cgcctttgca gttgctgccg actacttaga gttacacaac
     2941 gactgcgatg gcaaaccatg cactatcgca cagcgataat gcttccccga ccctgcccgt
     3001 gcagtgttta tttttatcca ctctcaatag gagaaacgaa atgacagaag aagacaaaga
     3061 atatcttcaa actaaaattg aaaacgaagg ttttgaatac gctttcgtca gttatagtga
     3121 ctttgaagaa gtccaagatg aaaaattcca cgggcttcgc aaggcttatt taaaagctcg
     3181 aagtgagtta gcggaatata ttgatattga agattaacca ctgatgaact gttcattgaa
     3241 caaatgaaca cttgacaacc aaccgcttgt agctaactgc aagcggttaa tttttggagg
     3301 aaaaatgcac atagaagaca aaatcgcttg gtggcttgcc aatggagaga caggggtaag
     3361 cagtaaaaca atggcttttt accttggtta cggaataaga ccaaaaatag aaggctaccc
     3421 acacgatgta tcggatttca ggcgttgctt tctgttgttg gagacagtcc cttttttgcg
     3481 aaataggatt gaaaaaatgg ctgaacttgg gaaagtttgg gctgcacttg caaaagaatg
     3541 gcacacatta gaggctctct acaacgaaga ggaagatcaa ataagatgcc ccaaaaccta
     3601 tgctaagttg agagaaatcc tagaagccaa cgaagaaaat gttgtccgca tcggtaatgt
     3661 gagcatttcg ataggttcaa cgacttaacg attatttaac caaatccctc taaatgaggg
     3721 gtttatttgg agagaatatg aacatctaca ctgacttcct ttctcgtgaa gagattgaat
     3781 ttattactca atgcaagcag aaaaatctaa tcaaaaaaca actcaacatt atgggcattc
     3841 catttaaaga aaatgcaaat ggattccctg ttgtccgccg tgattatgct caggctaaac
     3901 agcgtaaacc tattgcaacg aatgattctg actgggtatc aaatgcattt aaagcgtaaa
     3961 ttgagaagaa ggaggcactt atggcacgcc ctcgaaaata tgaaaacaac ggattgccac
     4021 aaaacctact ctgccgccgc agaaaacgag caaacggaag tatagttgaa tactactttt
     4081 acgttcttgc cgacggcaaa gaaaggtctc tcggtacaaa caaacacgaa gcaattttag
     4141 aagcagccaa gctaaatttt gaaaatagta gaaaatcccc aattgtttta tttattgatg
     4201 tggcaaaacg ctatgaattg gaagttgttc caaccaaaaa agccaaaaac actcgtcaat
     4261 ctaatttaca ggctattcat tggctatgta aattctttgg taacccacct gcaccgctcg
     4321 aaaaaattga gccaaagcac atcagtcaat atttacaatg gagaaaagac acgccggctg
     4381 ttgctaatat tgaggtaggt ttatttaaca caatttggaa tatggcaaga gaatggggat
     4441 acactgctct tccaagccca tcacaaggtg taaaaaaatt cccgaccaaa tatcgtgaag
     4501 tttatgtaga ggattatatc cttgataaaa tctatgaatt tgcagatgaa agaatggcgg
     4561 atattatcga aacagcctat ttgctgggac aaagaccgat tgatatttgt aatatacacc
     4621 gctcacacat ctatgacggt atattgcata ttactcaaca gaagacaggg aaaaaagtga
     4681 gatttgaaat tagtggtcgg ctaaaagaaa ttttagataa aaggttggga tacgaatcag
     4741 actggatttt taccaataaa tgggggaaaa aattaaaacg gcgaagttta ggcgatcatt
     4801 ttaaagaaat aagggagaga gcaatgaaag catatcctga acttgctgat gaaatcgcta
     4861 aagtacaaat gcgtgatatg cgtgccaaag cagccaccga tatttcccta atgacaaccg
     4921 atgaacaagc tcaaaaacaa cttgggcata catcaaaaag aatgacacat cattacatca
     4981 gaaaagacaa aatcctcaaa cctaccgatg aaatcaccta aaaataaagc ccttttgcca
     5041 aatacaaaag agccatttac tcacctaaaa tccgttccga aactattttg taaataattg
     5101 attttattga cctaaaaaac tataaaatcg caaaaagttt cggaacagaa aacagcgtta
     5161 aacccttgta aatcaaggat taagcacgtt tgaagtctaa gtgaactaat tttggtttag
     5221 ttgggtggcg ttgaattgct tgtactttta cttgctcttc tttacctgca acaacgatag
     5281 ttaatacttc gttatagaat gaatcgtgaa cttgtgcgtt gttcacttta tcgtgatcta
     5341 aaatgattga tacaggctct gcattaccac cgtagatgat tgcaggaact tgaccattgt
     5401 gacgcaggcg gcggctcgca cccttacctt gcgcagaacg aacttcagct tcaaatttga
     5461 atgacatagt tttattctct taaataaaat ggggaaatcc ccgtgaatag aaaaaacagc
     5521 aggcgaccca gctgtttccg aaaaaatatc ggcatatccg tctcgatatg ccaactacgt
     5581 attttactga agttgcagaa aaatgcaatg taaaaatatt aagcaaccag ttttttcaac
     5641 tgctctgcat aagcttccca atctgtaatt ggtcgagttg ctacacctga ttgaattgct
     5701 gcttttgcta caccaatcga gacattcacg atcaaacgtg gatcaaatgg cgttggaata
     5761 atatattccg ggccaaacga taattcgcca taagttgaaa taacttcaaa cggcacaggt
     5821 tctttagcca actctgcaat cgcatgggct gctgccattt tcatttcttc attaatggtt
     5881 tttgccccaa catctaatgc tccacggaat aagaacggga aacaaagcac attattcact
     5941 tggtttttaa agtctgaacg accggtacat acaatcgcat ctggacggac agccttcgct
     6001 tcagcaggtg taatttccgg cacagggttc gctaaagcaa gaattaatag atcttttgcc
     6061 attgttttaa ccatttcttg cgttaaagct ccgccttttg aacaacctaa gaaaacatct
     6121 gcattcgcaa cggcatctgc caatgttctc caaccattat cttctattgc atagaattgt
     6181 ttggtttcat ccatcttatc accacgacct tggaaaataa cgcccttaga atcgcacatt
     6241 gtgatatttt cttttttcac acctaatgaa cggagtaagt tagtacacgc aatcgctgat
     6301 gctccagcac cgtttaccac taaacgtact tctgaaattg ctttacctac cacttgtaat
     6361 ccgttaatca ccgccgcacc ggtaataatt gccgtaccgt gttgatcatc gtggaacaca
     6421 gggattccca tacgttcacg taatttttgc tctacataaa aacattcagg tgctttaata
     6481 tcttccagat taataccacc aaaagtcggt tctaacgatg caataatctc cactaatttc
     6541 tccggatcag tttcattaat ttcaatatca aacacatcaa ttccggcaaa tttcttaaat
     6601 agaacacctt tgccttccat cacaggctta cttgctaaag caccaatatt gcctaagcct
     6661 aacactgctg taccattaga aattactgca actaagttac ctcgtgccgt ataacgataa
     6721 gaagctgaag gatctttttc aatcgctaag caaggctcag caaccccagg agagtacgct
     6781 aaagctaaat cgtgctgagt atctaatgct ttagtaggag taacggaaat ttttccgggg
     6841 attgggaact cgtgaaaatc aagcgcctgt tgttttaaat cgctcatttt agaaacctta
     6901 taatctataa aaataaaagt aatcaataat agccaaagag tagccatttt accctaaatt
     6961 ttttcgcatt tttatggctt tgctctcatt ttttatgata tttacaaaaa ataatacaaa
     7021 aacgtccgct tgttttactc aaatcaagca ttcttcatct tattgataaa ataagaaacc
     7081 atttcagaag ctatatcaac atcatttact ctctctatgc cttcaaatcc tgggctggca
     7141 ttgacttcta aaataactac gcctttctct gtccgcagaa aatcaacgcc tgcaatatca
     7201 agccctatcg ttttagttgc tttaattgct aacgcacgtt ccatctgagt taattcaatc
     7261 ggttgagccg ttccaccttg atgaatattg gctctaaaat cgcctgttac gctggttcgg
     7321 ctcatggcag caaccacttc attgccaatc acaaacgccc gaatatcttg ccctttagcg
     7381 tcgcccacaa attgttggca tagataaggc tcatttactt gcctaaaggt cgctaacacg
     7441 gcctcggcat tatttttgcc ttcaaatagc attacgccat tcccctgtga accatttagc
     7501 acttttgaaa taagtggaaa agcaaattga ttgagttgtg atttcacaga aaccaaatgc
     7561 cctgcaaaat tcgtattagg aaccggcaaa ttgtgtttgg ctaatttttg taatgttcgc
     7621 catttgtctc gggctaacgc aaatgccgct gaatgattta gaacaggaat acctttcgcc
     7681 tcaaaatggc gtaacaccga acagcccatt tcggtactgc ctgtgccaaa acggggtaaa
     7741 atgccgtcat aattcggcaa caataccggc tccggacggt tgttatcata gctctcgcca
     7801 gcttgatagt agatcttaaa ttcgccattt tctaacccga gtagcattct attctggtct
     7861 aaaatatcca gctcaatccc ctttgcctca caagcggctt ttattcgaca gcagctatat
     7921 aaacgaggct ctcgacatag cattagccac ttcatttttt cagcaatcct ttctgattga
     7981 aaaacggcaa aatatgcgga cgaacaggct tatccaatgt tttatgaata gctgcttgcc
     8041 attgttgtgg ctcgccgatt ctggcttggt agtaagcggt caaattttca ttatattttg
     8101 caaattcagt ccaatcaaaa tcctgatatt gattgttata acaaaccaaa ctattcggca
     8161 aacgaggttt tattgccggc tcttgtgccg gataccccaa acacataccc accagtggaa
     8221 cacaatattc cggcaagtta agggctttag aaacccgctc aatatcatta cgcaatgctc
     8281 caatatacac cgctcccagc cctagtgatt cggcggctaa aaatacattc tgggccaaaa
     8341 taccggtatc taccgcccca atcaacgaca cctccgccca ttccaactgc gattcaggga
     8401 caagttgttt gtgtttatta aaatcaatgc agaacaccaa aaattcagca caatctacta
     8461 catattgcat acctgaaacg gcttttaatg tttctcgaat ctgccgatcg gttacacgaa
     8521 tcaccgtcac acattgcaga tgatttgaac ttgaagccgc tttacctgcc tcaattaaga
     8581 tttggaaaat ctcttcagaa ataggctgtt cggtaaattt acgaatagaa cggtgagata
     8641 aaatcgtctc aagagtcggt ttactttgca tatttttctc gtctaaagtt tatctaaata
     8701 atttttgcca tcaagcaaac ttacttgtcg cataatccac gcttggcgtt ttcgcatact
     8761 cgggccgggt ttatctaccc taaacaccaa cgggttaggc aaagaggctg ccaatagtgc
     8821 ggattcttgc aaggttagct gtttggctga ttttttgaaa aaatgctttg cggctgcttc
     8881 caccccgaaa atgccgttac caaattccgc aatattgagg tacacctcta aaatccgatc
     8941 cttactccac acattttcga ctaacagggt taaaggcact tcaatccctt tgcgtaacca
     9001 gctttgcccg tgccacaaaa acatattttt taccgtttgt tgcgaaatgg ttgaacctcc
     9061 acgcactttt ttggatttag cattcagttt caaggcagtt tctatcgctt gtaagtcaat
     9121 gccaaaatgg ctttcaaact tttgatcttc tgaggcaatc acagccattt gcatttgcca
     9181 cgaaatctca ttcaggctca cccattcttt tttgatcggg taagatttcc cctgaaccag
     9241 attctccacc tttttttgca ccatatacgc agaataaggc accggtaaca ccgaaaaaat
     9301 cagtatcgga atcaggaaaa atgtgccacc aaaggttaat aagcgactag aaccaaacca
     9361 aagccagccc agtttacttt ttattttgcg aggaataaaa aaaagcccta ttttcttcaa
     9421 aagagagctt aaaaatcgct tgttacgctt tgccattgac tgttccatta accttgccgt
     9481 tcagccattg cagaaaatct tggtcgagtg ttttaagcat atttgaacca cgagtgatgg
     9541 ttgccgcact ggtatttaaa ttttgttgga tttcccgttg cgaatcttca ccttttagca
     9601 aagcttgcac aatttgtaaa cgcaagccta atgaacctcg ctcatcggcg gtgagaaaca
     9661 ttgagaaaaa cggctcaagt ttatcttccg caaccgcttg ttcaagcaga gccaaaaact
     9721 gcgtccactc gtttggatct cgctggttat agagtgtttt catactgtcc cttgaagtaa
     9781 aaacggtgac aagcggtcag atttttacaa aattttgcag aaaaacgacc gcttgctctc
     9841 cattattttt tcgatttttt accgccacgt tggtcgtcta actctgcccc tttcggtacg
     9901 ctgaatttaa acaaatcgct tgagacaccg ccggtagtaa tattgcgtaa cacatataag
     9961 ttactttgcc cgtcacgctc aatggtactg aaacctttta ataaaccgct ttggtcaatc
    10021 cgcacatcaa actgttttaa attgcttttt ttcgattttg gcttaagcac gaaagtatca
    10081 gcactctggc tgacatcata ttgatcccag tggcttttat caccgctggt taataagacg
    10141 aatggcgtat tattaactgc atcttgcacg gtatttaccg taacttgtga aacgaaagga
    10201 tcgtaaaacc ataaatcttt gccgtcagat acaatcaaat tttcttgtgg tgatttggta
    10261 tccattctaa ataagttcgg gcgttttact tggaatttgc ctttgccttg ctgaatttgt
    10321 ttacctttgc tagaacgcac ggtttggtcg aaatccgcac tatattggct tacttgttcc
    10381 aaacggcgtt gtaattctgc aacagattga gcatcagcca atgccacatt tgccaagcca
    10441 aataacgcta aaccgaatac cgatttttta aataatgttt tcatttgttt tcctttttac
    10501 caacaagaat tttcttgttt gacaataaaa tcatcaaaag tttcatatta atgaactgtt
    10561 acaacaatac aataaaagtc gtgaattgta tagtttaatg agcttcgtcc cagttttcgc
    10621 ctacgccaac ttcggcaatc agtggcactt tgaggctaat cgctttttcc atttcggttt
    10681 tgattaattg gctgtaatgg tcgattttat cggctttgac ttcaaacacc aattcatcgt
    10741 gaacctgcat aatcattttg atttcatcat tatcacgaat cgcattatca ataccaatca
    10801 tcgccacctt aataatatcg gcagccgtgc cttgcattgg ggcgttgatt gccacccgtt
    10861 ctgctgcttt acgcaaaata gcattgccgg atttaatatc aggcaagtac aaacggcgac
    10921 caaatagggt ttcaacatag cctttttcaa ctgcaacttc acgaatatcg gtcataaatt
    10981 gttgaaccgc cgggtaacgt tggaagtaga gatccatata tttttgagcc tctgcacgcc
    11041 caatccctaa ttggtttgaa agcccaaatg acgacattcc gtaaatcagc ccgaagttaa
    11101 ttgctttcgc actgcggcgt tgttcggagg tgacttcacc taactccacc ccgaaaattt
    11161 cggcagcggt agcacggtga atatctttgc cctccgcaaa ggcgttaatc attccctcat
    11221 cattcgataa atgagccata atccgtagct caatttgtga atagtcggca gcgacaattt
    11281 tataaccttc tctcgcgaca aaagcttggc gaatccgtct gccctcttca ttgcggatcg
    11341 gaatgttctg caaattcgga tcgctggaag aaaggcgtcc ggttgcggtg actgcttgat
    11401 tgtaagaggt atgcacccgc cctgtttttt tgttaatcag ttgtggtaat ttatcggtgt
    11461 aggtagattt caacttactt aacccacgat gctccattaa taacttcggc actaaatgcc
    11521 cttgttgagc caactcgtct aacacttctt cgttggttga gggtgcacct tttggagttt
    11581 tcttcaacac cggcaagcct aatttttcaa acaaaatctc ttgtaattgt ttagttgagg
    11641 caagattgaa ggtttgccct gcttctgcgt gtactaatgt ttcaacttcc tccaaacgtt
    11701 tttcaatttc agccgattgg gtcaataatt ttttcgggtc aatcaacacg ccattgcgtt
    11761 caattcgaga aagtacgccc acaagtggca tttcaatttc atcgaataac ttcaccaatt
    11821 caggctcttg ctgtagtttt tcccacaata cttggtggag tttcatcgtc acatcggcat
    11881 cttctgccgc atattcagcc gcttttgcta tctcgatttt atcgaaggtc agttgatttt
    11941 tccccttacc agcaagctct tcaaacggaa tcgttttatg ccccaaataa cgggcggcta
    12001 aatcgtccat attatgacga ccggtgctgt tttgggtgta agattcaatc atcgtatcaa
    12061 aagcaacacc ttgtagctca atgccgtagt tcgcaaaaat ggttaaatca tatttaatat
    12121 tctgcccgat ctttttaatc tccgggttaa gcaaaatcgg cttgagttta cttaaacaag
    12181 cggtcaaatt tagctgattt tttaccaatt catcggaaga cgggctttct gaacgctcct
    12241 catcaccgaa catatcggct tgttgcggtt gggctttttg cttatgccca agcggaatat
    12301 agcacgcctc gccattttcc agtgcaaagg aaataccgac caaattagcc gacattgcgt
    12361 caaggctgtc ggtttcggta tccaccgcaa tcaaacgagc tgcggtgagt ttttcgatcc
    12421 aggctgataa tttctgttca gtatcaacgg tctcatattt gctacgatcg atctcgacca
    12481 catttgcaac attttcctca tttctgaccg cttgtgttac ttggtaatta ttcggtactt
    12541 tttcagccga agtttgagtg accggattgg cattttgatt cacttcgttc agccagcgtt
    12601 taaattcata atgctcaaat aattgagcaa gctcagcacg gtcttgcggc tgtgttaaaa
    12661 gttgatcgtg agtaacatca agttccacat cggttttgat ggtagcaagc aaataggata
    12721 aatcggcatt cgctttttcc gcttccaatt ttggggcgaa attttttgcc ccacggaaag
    12781 aaagggtggc aatttgatcc aaattagcat aaatctgttc aagtgaacca atgccttgca
    12841 ataaagctaa tgcggtcttt tcccccacac cttttacgcc cggaatgtta tcggcggaat
    12901 cgcccattaa tgccagaaag tcgataatca actcaggcgg aatgccatat ttttcaatca
    12961 cgccttcacg atctaacaaa gtattgttca tcgtgttaat caacataatg tgatcgttca
    13021 ccaattgtgc catatcttta tcgccggtgc tgatcaacac atctttgccg tctttagcgg
    13081 cttgcacagc aagcgtgccg atcacatcat cagcttccac accttcaatc gaaatcagtg
    13141 gaatgcctaa ggctttgata atgcgatgca aaggctcaat ttgagggcgt aaatcatcgg
    13201 gcattggtgg gcggtgcgat ttatattgct taaacaactc atcacggaag gttttccctt
    13261 tggcatcaaa caccacagca atatggcttg gattcacttg tgaaatcagg ctttttaaca
    13321 tattcagcac gccatacatt gcccctgtcg gttcgcctaa gcgattagtg agcggaggga
    13381 aagcgtgaaa tgctcgatat aaataggaag aaccatccac caataccagt ggattttttg
    13441 cgatagttgc cataaaaatc tctttataat caaataaata ttggcgttat tatacaagaa
    13501 tatttaagaa ttgagtgtgt ataaggctta ttttaaataa aacgttccga aaaaacattg
    13561 aatttcatta aaaaattcct ttatttatca aataaatgcg atttgtttcg gaacgttttt
    13621 ttaatgctta ttttgcaac
//
LOCUS       DANLXD010000072        13621 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.072, whole genome shotgun sequence.
ACCESSION   DANLXD010000072 DANLXD010000000
VERSION     DANLXD010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13621)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13621)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13621
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.072"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..997
                     /locus_tag="PXD18_001755"
     CDS             <1..997
                     /locus_tag="PXD18_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6302166.1"
                     /translation="TFYKGFETSQIATAFSLLVFTSQAFSLFAGSWGDSFGRYPIMML
                     GCLLDALAYILLLTTKNYPLLLLATFFFGLGSTLFSTNARAFLLANIQDTGDSYQLKT
                     KAQGKFLKVSSLSAMVAPLLTIPFIFYRKAEWLIWISCCIEIIMLFVMFKTAPKTHEC
                     ANGQCERFKFGALKGILNEQFIFVHLLLFIPLGLGSAFYIIFPYIFTNLLDKPELVSV
                     SFFVNNLIAVLLQSDFSRKLNLTVHKLIYIAPILIILQIMPWFYALQWLSTITAFLYL
                     VIFATITVYANTALSNMLVKLDNGKNQGLMFGSSKLILAITTLGVMNVLPYIFLI"
     gene            complement(994..2127)
                     /locus_tag="PXD18_001756"
     CDS             complement(994..2127)
                     /locus_tag="PXD18_001756"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HDL6302167.1"
                     /translation="MLIFMMNEYSPNYYIGVMSGTSLDGVDIALLDFAKNPPKMTACD
                     FFPMPEELRADISALLKTGETNLQKLGEIDHRLGLLYAETINAFLAKNQLKAEDIQAI
                     GCHGQTVWHSPDSEYPFTTQIGDMNLVAEQTGITTIADFRRKDMAVGGQGAPLVPAFH
                     QAIFSDPNRLTVVLNIGGISNISVLNPNSPTVGYDVGAGNTLMDSWIEQHQGKRYDKN
                     GEWARTGKLNTELLATLLDESFFAKAPPKSTGRELFNLTWLAKKLENLTACQPQDVQR
                     TLAEFTAQSIANELLRFESSLPRLLLVCGGGSRNPLLMERISALLPEWEVTTTTEFGL
                     DIDYVEAAAFAWLAYQRIHNLPSNMPSVTGAKKAVSLGVIYPA"
     gene            complement(2319..3158)
                     /gene="queF"
                     /locus_tag="PXD18_001757"
     CDS             complement(2319..3158)
                     /gene="queF"
                     /locus_tag="PXD18_001757"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HDL6302168.1"
                     /translation="MNYNDKSLSALKLGQKTEYKSEYDASLLQPVPRKLNRDSLGITQ
                     EQPFNRGADVWTCYELSWLNQNGLPQVAIADVAIDFKSENLIESKSFKLYLNSFNQTK
                     FSSIEEVGKTIQADLARCASGQVSVKIYQLSHYTQQPIVDFAGDCIDEQDIQIDSYAF
                     STHYLENIAEDELVEETLVSHLLKSNCLITSQPDWGSVQIRYKGKKLNREKLLRYLVS
                     FREHNEFHEQCVERIFCDLMQFAEPEKLTVYARYTRRGGLDINPFRSNFEEVPENLRM
                     ARQ"
     gene            complement(3163..3711)
                     /gene="gmhB"
                     /locus_tag="PXD18_001758"
     CDS             complement(3163..3711)
                     /gene="gmhB"
                     /locus_tag="PXD18_001758"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HDL6302169.1"
                     /translation="MGKKAIFLDRDGTINIDHGYVHQIDDFQFIDGVGKALKQLQDKG
                     YLLVLVTNQSGIARGYFSEAQFMQLTEWMDWSLDEDYGVVLDGIYYCPHHPEGKGEYR
                     KDCDCRKPKAGMFTQAIQDLNIDPSQSYMVGDKLEDILAAEAAGVKTKVLVRTDKAVT
                     EEGQAKADLVLDSLVDLVKYIK"
     gene            complement(3711..4178)
                     /gene="bcp"
                     /locus_tag="PXD18_001759"
     CDS             complement(3711..4178)
                     /gene="bcp"
                     /locus_tag="PXD18_001759"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HDL6302170.1"
                     /translation="MNILQAGDKAPKFTLQNQADEPVSLSQFAGKKVLVYFYPKALTP
                     GCTTQACGLRDSKSELDELNVVVLGISTDLPKKLAQFVEKKALNFTLLSDPDHQVAEA
                     FGVWGEKKFMGKTYDGIHRISFLIDEQGGVEQVFDKFKTGEHHQMIVDYLRGR"
     gene            complement(4265..4462)
                     /locus_tag="PXD18_001760"
     CDS             complement(4265..4462)
                     /locus_tag="PXD18_001760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302171.1"
                     /translation="MKFGYLNGVLEGKGKMRFDEAKLHAESEFEKYRIVQDRLFESDF
                     DKVLKEMLRSENQYRPSFSTT"
     gene            complement(4431..4913)
                     /locus_tag="PXD18_001761"
     CDS             complement(4431..4913)
                     /locus_tag="PXD18_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HDL6302172.1"
                     /translation="MIDKQIRNSTAEFLIFTQQNGAENITVRYEDNEIWLTQKLIAQL
                     FDCSTDNVSLHLKNIFNSRELDPNSVTEDFSVTAADVKNYRTKHYNFDAVISIGYRVN
                     SVRATQFRQWATKVLRNFAQKGYVIDRQRMENGTFLNEDYFEQLLAEIREIWLSERRS
                     "
     gene            complement(5056..6213)
                     /gene="hemW"
                     /locus_tag="PXD18_001762"
     CDS             complement(5056..6213)
                     /gene="hemW"
                     /locus_tag="PXD18_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HDL6302173.1"
                     /translation="MNLILPPLSLYIHIPWCVQKCPYCDFNSHAQKGLIPEQEYIEHL
                     LADLSQDLTAYRVAIGDRKLYSIFIGGGTPSLFSAEGIAYLLIEVEKRIAFEPNIEIT
                     LEANPGTAEAERFLGYAQGGVTRISMGIQSFEPEKLLKLGRIHDANEAKQAIKFAQNS
                     AKSGLQSFNIDLMHGLPNQSVKQALADLETGISLNPPHLSWYQLTIEPNTMFYYRKPT
                     LPDDDELWDIFEQGHQLLTNAGYEQYETSAYAKKGYQCRHNLNYWRFGDYLAIGCGAH
                     GKISYPTGEIYRFSKIKHPKGYMRGEYRYSQDLIELDDRPFEFFMNRFRLLEATPKQE
                     FEWFTGLDREVVRPTIDWALNQNYISETATHWQITQHGKLFLNELLEGFLE"
     gene            6435..8018
                     /locus_tag="PXD18_001763"
     CDS             6435..8018
                     /locus_tag="PXD18_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6302174.1"
                     /translation="MKKQFEHNESRRGFMKLIAGVGAGMAFSGTLGTFTPKAFAAPAA
                     GSTIEAGIAYPISTGFDPLTSSGASSMAANLHIFEGLVDLHPATRKPYLALAAAEPEK
                     IDDVTYRITLRDGAKFHNGNPVTTEDVVYSFERVLDPAKASLFAQFIPFIDTVKKVDD
                     KVVEFKLKYPFALFKERLTIVKIVPKAVVEAGQAAFDANPVGTGPYKFVSATKDDRIV
                     FEAFADYNGGYPAQVEKMTWFLLSDDAARVTAQESGRVQAIESVPYLDAERLKRKGTV
                     ESVQSFGLLFLMFNCEKAPFNNPKVRQALHYGLDTQKLIDVVFLGNAKAATSYVQDTH
                     PDYVKANSQYDFDKAKAEALLAEAGVTELKFELLATDHSWVKECAPLILESWNSLKGV
                     KVSLKHLQSGALYGTHVDKGAYEVVIAPGDPSVFGNDLDLLLSWWYRGDVWPKRRFRW
                     SETAEYAEVQKLLDEAAKNPAASKEAWAKAINIIAEQVPLYPIIHRKLPTAWNDKALT
                     GFQPLPTTGMSFIGVGRAK"
     gene            8230..9183
                     /locus_tag="PXD18_001764"
     CDS             8230..9183
                     /locus_tag="PXD18_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6302175.1"
                     /translation="MEIILRLLWRRLMALPVMILGVTALVFIVLQFTPGDPATVALGE
                     SASEAAKEIYREQHGLNDPLLVQYFRFLGNLFVLDFGMTTPPEQPIVDMIAKAFPLTL
                     QLTFIGVFLAAIVSFTLGVTAALYRDTWIDQLIRLISVAAVATPSFWLGILLIQYFSL
                     KLDWLPSGGFIPFSEDPKGYVNSMVLPSLALAVPVCASLIRVVRTTMVEEMDKDYVRT
                     AIGNGVPYSTVIRHNVLRNALITPVTVLGLRVGYLLGGAVVIEQIFDLPGMGKLIFNG
                     IVNHDLNLVQGVVLTIAFTFVLVNIIVDILYLLINPKIRSL"
     gene            9185..11155
                     /locus_tag="PXD18_001765"
     CDS             9185..11155
                     /locus_tag="PXD18_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/oligopeptide/nickel ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HDL6302176.1"
                     /translation="MFRQGLAARLASGGARFRALSTSSKIALLFIVFIALVAIFAPLV
                     APYDPLQTLRPVQAPSGDYLFGTDRLGRDIFSRMVWGARTSLFIGLGAVGVAILFGSI
                     LGATAATADKFGNEVIMRFMDILMAFPGIALAAVLLATFGNSVPVIIVTIAVVYTPQL
                     ARVVRANVVSQWEEDYVRAERVIGGSRTYILLKHVVRNTAAPVLVFATVMVADAIVFE
                     ASLSFLGAGVQPPFPSWGNILSEGRNLVLSGFWWATTFAGIMILLTVLALNILAEGLT
                     DALVNPKLKRSTQSKEDVAKPLATDVQEAMSETLALKRYLLKLHEKETTRTDRMQLNS
                     TAKPILQVKNLSIRFPNRYGETPLVDNISFTVHEGETMGLVGESGCGKSITAFSIMGL
                     LPKTAKITGEILFTDRSGKQHNLLESADLNALRGHEISMIYQDALSALNPSMRIKDQM
                     AQLISRGGKQSAETLLQWVKLDPEKTLNRYPHELSGGQRQRVLIAMALAREPKLLIAD
                     EPTTALDVTVQAEVIKLLNELREKLGFAMVFVSHDLALVAQIAHHITVMYAGQVVETA
                     PTTPLLANPTHEYTRGLLGSVLSTELRAERLYQIPGSVPSPFDFAKGDRFASRSLRPD
                     ANPEQHLKLVPTGDHPQHFWASHLEDPQSKEA"
     gene            11170..11976
                     /locus_tag="PXD18_001766"
     CDS             11170..11976
                     /locus_tag="PXD18_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6302177.1"
                     /translation="MSMKFIKEQPIIELSNIVVQFASRDGTLFNPKKFTAVNDVSLAI
                     HAGETVGLVGQSGCGKSTLASVMIGLQKPTSGTVKFNGLEMKYGSAEARKYFGSQVSV
                     IFQDPATALNPRMRVLDILKDPMDIHNILQPQEREKRVYDLLSRVGLPRSAALVEPTR
                     LSGGQKQRVAIARALALNPKLIVADEPTSALDVSVRAQVLNLLADLKKELNLAMVFIS
                     HDLQTVHQVSDRIVVMNGGKIVEMGDASDVFERPTQEYTRTLIEAAPSLL"
     gene            12039..>13621
                     /locus_tag="PXD18_001767"
     CDS             12039..>13621
                     /locus_tag="PXD18_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDL6302178.1"
                     /translation="MIQITQTINIDLLIVGSGIAGLSAAVEAKEKGINTLLISKSTIG
                     SGASYFPLKATLGIQVTGDEADKIHFKEDIENIGKGKINPNVVQAYIEDSPQAIELLH
                     RIGFQPWKRNDNRPACFAKYPRPIYLIKDWRESALRAKQILQEQHIAFYENATLLHIV
                     TDNNQVQGAVFSLTTSGQISYIFCKTKHLILAAGGIAGLYKDNLYPADVIGSLHYVAQ
                     QAGATLVNLAFIQFIPAFVEPKYKVLFGEHTLKYVTQITDSKGNNLFPHLNAEQFAKM
                     VLERSHYAPFSLDFAGVEFDLVMMKHLLENPHEKGIYLKYSPKLYEDTEEFYTVYLNW
                     LKNEVGIDLVQDKIAIKPFAHSCNGGIQINQWGESAVKGLFAIGEISHCIEGANRMGG
                     NSVGGGLVFAKRAVSEIVRSLEQNDLQKNSEISPLAMAEKALNQLANSTANLELTASE
                     VLSTIREKMALYANVYRTRSNLKLLLEELNRLEQEFDPIYHAQYQGIEIYNALKTAQL
                     VVNQMLNEQSLGAHYLDEQ"
BASE COUNT         3919 a         2905 c         2684 g         4113 t
ORIGIN      
        1 tacattctac aaaggctttg aaaccagcca aattgcaact gcattttctt tgttggtctt
       61 taccagccaa gcattttccc tttttgcagg ttcttggggt gatagttttg gacgttaccc
      121 tatcatgatg cttggctgtt tgctcgatgc cctagcttac attttattac tgacaacaaa
      181 aaattaccct ctgctattac ttgctacctt tttcttcggg ctcggtagca ccttatttag
      241 taccaatgcg agagcattct tattagccaa tattcaagat accggagata gttaccaact
      301 caaaactaag gctcaaggta aatttctgaa ggtatcaagc ctgtcagcga tggtagcacc
      361 attacttact attccattta ttttctaccg taaagcagaa tggcttattt ggattagctg
      421 ctgcattgaa attattatgc tattcgttat gtttaaaacc gcacccaaaa cacatgaatg
      481 tgcaaatggg caatgcgaac gctttaaatt tggtgcatta aaaggaatac taaatgaaca
      541 atttattttt gtacatttat tactttttat tccgcttggt ctaggaagtg cattttatat
      601 tatattcccc tatatattca ccaatcttct ggataaacca gaattagtct ctgtctcatt
      661 ctttgtgaat aatttaattg cagtgttatt gcaatctgat ttttcacgaa aattaaatct
      721 gacagtacat aaacttattt atattgcacc aatactgatt atacttcaaa taatgccttg
      781 gttttatgca ctccaatggc tttcaaccat cactgcattt ctctatttag tgatttttgc
      841 cactattacc gtgtatgcga atacggcact atctaatatg ctagtgaaat tagacaatgg
      901 taaaaaccaa ggcttaatgt ttggaagctc taaattaatt ttagctatta ccactctcgg
      961 agtaatgaat gtattacctt acattttctt aatctaagca gggtaaatca cgcccaaact
     1021 cacggctttt tttgctcctg tcacgctagg catattactg ggtaaattat ggattcgctg
     1081 gtaagctaac caagcaaaag cggcagcctc tacataatca atatctaaac caaattctgt
     1141 agtggttgta acctcccact cgggaagtaa agcagaaatc cgttccatta ataacggatt
     1201 tcttgaccca ccaccacaaa ctaaaagcaa gcgaggcaga gagctttcaa agcgtaataa
     1261 ctcattggca atactttgag cagtaaattc tgccagcgtg cgttgcacat cttgtggctg
     1321 acaagcggtc aaattttcca atttttttgc aagccacgtt aaattaaaca gctcccgccc
     1381 agtgctttta ggcggggctt tagcaaaaaa cgactcgtct aataacgtcg ctaacagttc
     1441 agtattgagc ttgcccgttc tcgcccattc gccgttttta tcgtatcttt tgccttgatg
     1501 ttgttcgatc caactatcca tcaaagtatt tccggctcct acatcataac caactgtagg
     1561 ggaattggga tttaacaccg aaatattgct gatgccgcca atattcagca ccactgttag
     1621 acgatttgga tcgctaaaaa tagcttgatg aaatgccggc acaagcggag ccccttgccc
     1681 acctactgcc atatctttac gccgaaaatc agcgatagtg gtaataccgg tttgctctgc
     1741 caccaaattc atatcgccaa tttgggtggt gaagggatac tcagaatccg gtgaatgcca
     1801 caccgtctgc ccgtgacaac ctatggcttg aatatcttct gcttttagct gatttttcgc
     1861 taaaaacgca ttgatcgttt ctgcataaag caagcctaaa cggtgatcaa tttcccccag
     1921 tttttggaga ttggtttcgc cggttttaag taacgcagaa atatccgccc gtaattcctc
     1981 cggcattgga aaaaaatcac aagcggtcat tttcggtgga ttttttgcaa aatccagcaa
     2041 agcaatatcc accccatcaa ggctcgtgcc ggacattacg cctatatagt aatttgggct
     2101 atattcattc atcataaaaa tcaacatctg ctatttgtta cttttctttg ctttgccaaa
     2161 gaaaagtaac caaaagaaag gcaacccgag cttcaccgct atcctcgctt agtttgaatt
     2221 ggcttaacgg caaatttaca ttcgctccgc tcagagtaaa tttacctacc aattcaaaca
     2281 cgctcaggcg gttcagacgg gaacaaaaaa caacaaaatc attggcgtgc cattcttaga
     2341 ttttccggca cttcctcaaa attcgatcta aacggattga tgtctagccc gcctcgtctg
     2401 gtgtagcgtg cgtaaactgt taatttttcc ggctcggcaa attgcattaa atcacagaaa
     2461 atgcgttcca cacattgttc gtggaactca ttatgctcac ggaacgacac taaataacgt
     2521 aacagttttt cacggtttag ctttttgcct ttgtagcgaa tttgcacact tccccagtca
     2581 ggctgtgacg taattaagca gttagatttg agcaaatggc tgactaaggt ttcttccacc
     2641 aactcatctt ctgcaatgtt ctctaaataa tgagtcgaaa acgcataact gtcgatttga
     2701 atatcttgct catcaatgca atcgcctgca aaatcaacta tcggctgttg cgtgtagtgt
     2761 gataattggt aaatttttac cgaaacctga ccgcttgcac agcgagccag atccgcttga
     2821 atcgttttcc caacttcttc tattgagcta aatttggttt ggttaaaact gttcaaatag
     2881 agcttgaaac ttttcgattc aattaagttt tcgctcttaa aatcaatggc gacatctgca
     2941 atcgctactt gcggtagccc attttggttc aaccaagata gctcatagca agtccacaca
     3001 tcagcccctc ggttaaaagg ctgctcttgt gtaatgccta aactatcacg gtttaattta
     3061 cgaggaacag gttgcaaaag cgaggcatca tattcgcttt tgtactcggt tttttgccct
     3121 aatttcaggg cggaaaggga tttatcgtta taattcattg ctttatttaa tatattttac
     3181 taaatcaact aaactatcta acaccaaatc ggctttagcc tgaccctctt ccgtcactgc
     3241 tttgtcagtg cgaaccagca ctttggtttt cacgccggcg gcttctgcgg caaggatatc
     3301 ttctaattta tcgcccacca tataagattg gcttgggtcg atgtttaaat cttgaatcgc
     3361 ttgagtaaac atacctgctt taggcttacg gcaatcacaa tctttacggt attcgccttt
     3421 gccttcgggg tgatgtgggc agtagtaaat accgtctagt accacgccat aatcttcatc
     3481 gagcgaccag tccatccatt cggttagttg cataaattgt gcttcgctaa aatagcctcg
     3541 ggcaatgcca gattgattgg ttaccagcac caataaataa cctttgtctt gtagctgttt
     3601 taacgccttg ccgacaccgt caataaattg aaaatcatca atttgatgca catagccgtg
     3661 atcgatatta attgtgccgt cacggtctaa aaaaatggct ttttttccca ttagcgaccc
     3721 cgtagataat ccacgatcat ttggtgatgt tcgccggttt taaatttatc aaacacttgc
     3781 tcaacccccc cctgctcatc aattaaaaaa ctgatgcgat gaatgccgtc ataggttttt
     3841 cccataaatt tcttttcgcc ccatacacca aaggcttctg caacttggtg atccgggtca
     3901 gataataagg taaaattaag tgcttttttc tctacaaatt gagctaattt tttcggtaaa
     3961 tcggtgctaa ttccgagaac aaccacattg agctcatcaa gttctgattt gctgtcacgc
     4021 agtccgcacg cttgcgtagt gcaaccgggt gtaagagctt tcggataaaa ataaaccagt
     4081 acttttttgc cggcaaattg agagagagaa accggctcgt cagcctgatt ctgaagggta
     4141 aatttagggg ctttatcgcc tgcttgtaag atattcattt gtaatttttc cataaaaaat
     4201 aaccgcttgc attatacacg gcaagcggtc aaacttggca aaaaatttgc aaaatgcggt
     4261 tgttttatgt tgttgaaaat gatggacggt attgattttc cgaacgcaac atttctttca
     4321 ataccttgtc aaaatcgctt tcaaataatc tgtcttgaac aatgcggtat ttctcaaatt
     4381 cgctttctgc gtgcaatttc gcttcatcaa aacgcatttt gcctttgccc tcaagaacgc
     4441 cgttcagata accaaatttc acgaatttct gccagcaact gctcaaaata atcttcattt
     4501 aaaaatgtac cattttccat tctttggcgg tcaatcacat agcctttttg ggcgaaattc
     4561 cgtaatactt tagttgccca ttggcgaaat tgtgtcgccc gcaccgagtt taccctatag
     4621 cctatcgaaa taacggcatc aaagttgtag tgtttggtac gataattttt gacatctgcg
     4681 gcagttaccg agaaatcctc ggtaactgaa tttggatcga gttccctact attaaaaatg
     4741 ttttttaaat gcaaagaaac attatctgtt gagcaatcaa aaagctgagc aattaatttt
     4801 tgcgtaagcc aaatttcgtt atcttcatag cgaacggtaa tattttctgc cccattttgt
     4861 tgagtaaaaa tcaaaaattc ggcggtacta ttacggattt gtttatcgat cataagctct
     4921 ccttattgtg aaggctatgc tactaaatac tgtttttttg tctagtaaaa aatgaggatt
     4981 tttcgacgca gatcacaaaa aacgcctgta atttagcatt acaatgcggt ctttttttag
     5041 tcgttttttt gcaaattatt ccaaaaatcc ttccagtaat tcatttaaaa acaatttacc
     5101 gtgttgggta atttgccaat gggttgcggt ttcggaaata tagttttggt ttaacgccca
     5161 atcgattgtc gggcgaacaa cttccctgtc taaccctgta aaccattcaa attcttgttt
     5221 tggtgtcgct tcaagtaatc taaagcggtt cataaaaaac tcaaacgggc ggtcgtctaa
     5281 ttcaatcaaa tcttggctgt agcgatattc acctcgcata taacctttcg ggtgtttgat
     5341 tttgctaaag cgataaattt ccccggtcgg atatgaaatt ttgccgtgag cgccacaacc
     5401 aatcgccaaa taatccccaa atcgccaata atttaaattg tgtctgcatt ggtagccttt
     5461 tttggcataa gccgaggttt catactgctc atagccggca ttcgttaaaa gttgatgccc
     5521 ttgctcgaaa atatcccata actcgtcatc atcaggcaag gttggcttac gataatagaa
     5581 catcgtattc ggctcaatcg tgagctgata ccacgataaa tgcggtggat tgagtgaaat
     5641 ccctgtttct aaatccgcca aggcttgttt aaccgattgg tttggtaagc cgtgcattaa
     5701 atcaatgttg aaactttgca agcccgattt tgcagaattt tgggcaaatt taatcgcttg
     5761 ttttgcttca tttgcatcgt gaatccgtcc taatttcaat aatttttccg gctcaaaact
     5821 ttggattccc attgaaatgc gggttacgcc accttgtgcg taacctaaaa atcgctctgc
     5881 ctctgcggtt cccgggttcg cttccagtgt aatttcgata tttggctcga atgcaatccg
     5941 tttttctact tcaattaata aataagctat cccttccgct gaaaataagc tcggggtgcc
     6001 gccgccaata aaaatagaat ataatttacg atcacctatt gccactcggt aagcggtcaa
     6061 atcttgggat aaatctgcaa gtaaatgttc gatatattct tgctcgggaa ttaatccttt
     6121 ttgagcgtgc gagttaaaat cgcaataagg gcatttttgc acgcaccaag ggatatggat
     6181 ataaaggctt aaaggcggta aaatcaggtt cactgtcaat ttttcattta tgattaaatt
     6241 ggcgaataat aacgaaaagc acgtgaagtg aaaagcaaag attttcgtga gctagatcac
     6301 aaattcaata attcttgctt taccactttg acattaatga tatgataaat tcaattcaaa
     6361 aaagtgcatt ttttgataaa ttcacttcag caaataatac cgcccctatc ataaaaactt
     6421 aaaggagctt taagatgaaa aaacagtttg aacacaacga atcccgccgt ggttttatga
     6481 aactaattgc aggtgtcggt gccggtatgg catttagtgg cactttaggt acatttacac
     6541 ctaaagcatt tgcagcccct gccgccggct caacgattga ggccggtata gcttatccca
     6601 tatcaaccgg atttgacccg cttacctcaa gcggtgcatc ctcaatggcg gcaaacctcc
     6661 atatttttga aggcctcgtg gacttacatc cagccactcg caaaccatat ttagcattgg
     6721 cagcagcaga gcctgaaaaa attgatgatg taacctatcg aattacttta cgtgacgggg
     6781 ctaaattcca caatggtaat ccggttacca ctgaagacgt agtttactca tttgaacgtg
     6841 tattagaccc agctaaagca tcacttttcg cacaattcat tccatttatt gacactgtga
     6901 aaaaagttga tgacaaagtg gttgaattca aattgaaata tccatttgcg ttattcaaag
     6961 agcgcctaac cattgttaaa atcgtaccaa aagcagtggt agaagccggt caagctgcat
     7021 ttgatgctaa tccagtgggg actggcccat ataaatttgt atccgcaact aaagatgatc
     7081 gtattgtttt cgaagcattt gcagattata acggtggcta cccggcacaa gtcgagaaaa
     7141 tgacttggtt cttactttct gatgatgccg ctcgtgtaac cgctcaagaa tctggccgtg
     7201 ttcaagcaat tgagtctgtg ccttacttag atgcagaacg cttaaaacgt aaaggtaccg
     7261 ttgagtcagt acaatcattc ggcttactgt tcttaatgtt taactgtgaa aaagcaccgt
     7321 ttaacaaccc gaaagttcgc caagcgttac attatggctt agatacccaa aaattaattg
     7381 atgtggtgtt cttaggcaat gcaaaagctg ctacatctta cgtgcaagat actcacccgg
     7441 attatgtgaa agcaaattcg caatatgatt tcgataaagc gaaagccgaa gcgttattag
     7501 cagaagcggg tgtgacagag ttaaaatttg aattgttggc aaccgatcac tcttgggtga
     7561 aagaatgtgc gccattaatt cttgaatcgt ggaacagctt aaaaggcgtg aaagtttcac
     7621 tcaaacactt acaatcaggt gcattatatg gcacacacgt tgataaaggt gcatacgaag
     7681 ttgtgattgc acctggcgac ccatcagttt tcggtaatga cttagaccta ttattaagct
     7741 ggtggtatcg tggtgatgta tggccgaaac gtcgtttccg ctggtctgaa acagctgaat
     7801 atgcagaagt acaaaaactg cttgatgaag cggccaaaaa tcctgctgct tctaaagaag
     7861 cctgggcgaa agcaatcaat attatcgctg aacaagtgcc tctttaccca attattcacc
     7921 gtaaattgcc aactgcgtgg aatgataagg cattaacagg tttccaacca ttaccaacaa
     7981 caggtatgtc atttatcggt gttggtcgtg ctaaatagtc gtaacggcta gctaaatgca
     8041 agcggtaata ttttacaaaa aatttaccgc ttgcataaat aaaaatcaaa atgatgtaat
     8101 attcgtctta tatcactcag aattcttacc atttctatat tttcatttat aatcctacat
     8161 atcactatat tagcttgtag gtaaacttag atttaatttt ggagtgtaac tacactcaag
     8221 gagaagaaaa tggaaattat actccgatta ttatggcgtc gcctaatggc tctgccggta
     8281 atgatcttag gcgtaactgc cttggtattt attgttttac aattcacccc cggagatccg
     8341 gcaaccgttg ctctcggtga aagcgccagc gaagccgcta aagaaatcta tcgtgaacaa
     8401 catgggttaa atgatccatt gcttgtacaa tattttcgct ttttagggaa tttattcgta
     8461 ttagatttcg gtatgacaac ccctccagaa cagcctattg ttgatatgat tgctaaagca
     8521 ttccctttaa cattacagct tacctttatt ggggtcttct tagctgctat cgtctctttc
     8581 acattaggtg taacggcagc actttaccgt gatacttgga ttgatcaatt aatccgttta
     8641 atctcggttg ccgctgttgc cacaccttct ttctggttgg gtattttatt gattcaatac
     8701 ttctccttaa aattagattg gttgccttca ggcggtttta ttccatttag cgaagatcca
     8761 aaaggctatg taaactcaat ggttctccct tcactcgctt tagctgttcc tgtatgtgcc
     8821 tcattgatcc gtgtcgtgcg tacaacaatg gtagaagaaa tggataaaga ttatgttcga
     8881 acagccatcg gtaatggtgt accttactca acggtgattc gccacaacgt gcttcgtaat
     8941 gccttaatta ctccggtaac agtattaggt ttacgggttg gttatttatt aggtggtgca
     9001 gttgtgattg aacagatctt cgacttaccg ggaatgggta aattaatttt caacggtatc
     9061 gtcaatcacg acttgaactt agtgcaaggt gtagtattaa ctatcgcatt tactttcgtg
     9121 ttggtgaata tcattgttga tattctttac ttgctcatta atccaaaaat tcggagttta
     9181 taatatgttt cgccaaggat tagctgctcg acttgcttca ggcggtgcaa gatttagagc
     9241 attatcaacc agctcaaaaa tcgccttact ctttattgta tttatcgcat tagtcgctat
     9301 ttttgcacca ttagtagcgc cttatgaccc actgcaaacg ctacgtccag tgcaagctcc
     9361 aagcggtgat tatttattcg gtacagaccg tttaggacgt gatattttct cgcgtatggt
     9421 atggggagca agaacatctc tctttatcgg tttaggtgcg gtaggcgttg cgattctatt
     9481 cggtagtatt ttaggggcaa ctgcggcaac cgccgataaa ttcggtaacg aagtgattat
     9541 gcgttttatg gatatcttaa tggcattccc gggtatcgca ttagctgctg tattacttgc
     9601 cactttcggt aactctgtac ctgtgattat cgtgactatt gcggttgttt acactcccca
     9661 acttgcccga gtggtgcgtg ctaacgtagt atctcaatgg gaagaagatt atgtgcgtgc
     9721 cgagcgtgta attggtggta gccgtactta tattctatta aaacacgttg tgcgtaatac
     9781 tgctgcaccg gttttagtat tcgcaacagt gatggttgct gatgccatcg tatttgaagc
     9841 atcactttca ttcttaggtg caggtgtcca gcctccattc ccatcttggg gaaatatctt
     9901 atctgaaggt cgtaaccttg tattaagtgg cttctggtgg gctacaactt tcgcagggat
     9961 tatgatttta ttaaccgtac ttgcgttaaa tatccttgct gaaggcttaa ccgatgcgtt
    10021 agtaaatcca aaactaaaac gttcaactca aagtaaagaa gatgtcgcaa aaccattggc
    10081 aacagacgtt caagaagcaa tgtctgaaac tcttgcgtta aaacgttact tactcaaatt
    10141 acacgagaaa gaaacgaccc gtactgaccg tatgcaatta aactcaacgg ccaaaccgat
    10201 tttacaagtg aaaaacttat caatccgttt cccaaatcgt tatggtgaaa ctccgcttgt
    10261 tgataatatc agctttactg ttcacgaagg cgaaaccatg ggcttagtgg gtgaatctgg
    10321 ttgtggtaaa tcaatcaccg cattctcaat tatgggttta ttaccaaaaa ctgcaaaaat
    10381 cactggtgaa atcctcttta ccgaccgttc aggtaaacaa cacaatcttt tagaatcagc
    10441 cgatttaaat gcccttcgtg gtcacgaaat ctcgatgatt taccaagatg cattaagtgc
    10501 gttaaaccca tcaatgcgta ttaaagacca aatggcacaa ttaatcagcc gtggtggtaa
    10561 acaatcagca gaaacattat tgcaatgggt aaaacttgac ccggaaaaaa cgctcaaccg
    10621 ttatcctcac gagttatctg gaggacaacg tcagcgtgta ttaattgcaa tggcacttgc
    10681 tcgtgaaccg aaactattga ttgctgatga accaacaaca gcattagacg taaccgttca
    10741 agctgaagtg atcaaattat taaacgaatt acgtgagaaa cttggatttg caatggtatt
    10801 cgtgagccac gacttagctt tagtggcaca aatcgctcac cacatcacgg taatgtatgc
    10861 tggtcaagtg gttgaaactg caccaactac gccattattg gcaaacccaa cacacgaata
    10921 cacacgtgga ttattaggct cggtactttc taccgaattg cgtgcagaac gcctatacca
    10981 aattccgggc agtgtgcctt caccatttga ttttgcgaaa ggtgaccgtt ttgcgagtcg
    11041 ttcattaaga ccagatgcaa accctgaaca gcacttgaaa ttagtgccaa ccggtgatca
    11101 cccacaacac ttctgggctt cacacttaga agatccacaa tctaaagaag cataaaggag
    11161 agcaatacga tgagtatgaa atttatcaaa gaacagccaa ttattgaact gtctaatatt
    11221 gttgtgcaat ttgcttctcg tgacggcacc ttatttaacc cgaaaaaatt cacggcggta
    11281 aatgatgtca gcctagcaat tcacgccggt gaaacagtcg gtctggttgg acaatctggt
    11341 tgtggcaaat ctactttagc cagtgtgatg atcgggcttc aaaaaccaac ctccggcaca
    11401 gtaaaattta acggcttaga gatgaaatat ggcagtgcgg aagctcgcaa atatttcggt
    11461 agccaagtgt cagtaatttt ccaagacccg gcaaccgccc taaatccgcg tatgcgtgtg
    11521 ttggatattt taaaagatcc gatggatatt cataatatct tacaaccgca agaacgtgag
    11581 aagcgggttt atgatttgct ctctcgagtc ggtctacctc gttcagcggc gttggtcgag
    11641 ccaacccgat tatctggtgg gcaaaagcaa cgtgtagcga ttgctcgtgc attggcatta
    11701 aatccgaagc tgattgtggc tgatgaacca acctctgcac ttgacgtatc ggttcgagct
    11761 caagtactga acctgctggc agacttgaaa aaagaactca atttagcgat ggtatttatc
    11821 tctcacgact tacaaaccgt tcaccaagtt tcagaccgca ttgtggttat gaacggcggt
    11881 aaaattgtgg aaatgggcga tgcttcagac gtatttgaac gcccaacgca agagtacacc
    11941 cgaaccttaa ttgaagcagc accatcttta ttataattgt gctttgtgcc tacaagcggt
    12001 aaaatttttc gcaaatttta ccgcttgtgt ttttatttat gatccaaatt acccaaacca
    12061 ttaacattga tttattaatt gtcggctctg gcatcgctgg gctttctgct gcagttgagg
    12121 caaaagaaaa aggcattaat accttactga ttagcaaatc tacgattggc tcgggagcga
    12181 gctactttcc gcttaaggca acacttggca ttcaagtaac cggcgatgaa gccgataaaa
    12241 ttcactttaa agaagatatt gaaaacatcg gcaaaggcaa aatcaaccct aatgtggtac
    12301 aagcctatat cgaagattca ccacaagcga ttgaactact ccaccgtatc ggctttcagc
    12361 cttggaagcg taacgacaac cgtccggctt gttttgccaa ataccctcgc ccaatttatt
    12421 taattaaaga ttggcgggaa tctgccctac gagcgaaaca gattttgcaa gagcaacaca
    12481 ttgctttcta tgaaaatgct acccttttac acatcgtcac agacaataac caagtgcaag
    12541 gtgcggtatt ttcgctcact acaagcggtc aaatttccta tattttttgc aaaaccaagc
    12601 atcttatttt agccgcaggc gggattgctg ggctgtataa agataatctc tacccggctg
    12661 atgttatcgg ttcacttcat tatgtggcac aacaagccgg ggcaaccttg gttaatcttg
    12721 cctttattca gttcattcct gcctttgtcg agccaaaata caaggtgcta tttggcgaac
    12781 atacattgaa atatgtcacc caaatcaccg attctaaggg taacaatcta tttccacact
    12841 taaatgccga gcaatttgca aaaatggtgc tggaacgtag ccattatgct cctttcagcc
    12901 ttgattttgc cggcgtggag ttcgatttag tgatgatgaa acatttgctt gaaaaccctc
    12961 acgaaaaagg catttacctt aaatacagcc ccaaactgta tgaagacacg gaagagtttt
    13021 ataccgtcta tttgaattgg ctcaaaaatg aagtcgggat tgatttagtg caagataaga
    13081 ttgcaatcaa gccgtttgct catagctgta acggcggcat tcaaattaat caatggggcg
    13141 aaagtgcagt aaaagggcta tttgcgattg gtgagatttc tcactgcatt gaaggggcaa
    13201 accgtatggg tggtaactca gtcggcggtg gcttagtgtt tgccaaacgt gcggtatcgg
    13261 aaattgttcg ttcgctagaa cagaatgatt tgcaaaaaaa cagcgaaatc tcaccgcttg
    13321 caatggcaga aaaagcatta aatcagcttg ctaattcaac tgctaatcta gaactaactg
    13381 ccagtgaagt gctttctact attcgagaga aaatggcgtt atacgccaat gtgtaccgca
    13441 ctcggagcaa cctcaaacta ctacttgagg aattaaaccg tttggaacaa gaatttgacc
    13501 caatctatca cgctcaatat caaggcattg aaatttacaa tgcgttaaaa accgctcaat
    13561 tagtggtcaa tcaaatgcta aatgagcaga gtttaggcgc gcactactta gatgaacaaa
    13621 a
//
LOCUS       DANLXD010000073        13596 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.073, whole genome shotgun sequence.
ACCESSION   DANLXD010000073 DANLXD010000000
VERSION     DANLXD010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13596)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13596)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13596
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.073"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            152..946
                     /locus_tag="PXD18_001768"
     CDS             152..946
                     /locus_tag="PXD18_001768"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HDL6302179.1"
                     /translation="MRLIPLETDHDVSVWAARYIVDRINAFQPTKEKPFVLGLPTGGT
                     PEKTYKELIKLYQAGEVSFKNVVTFNMDEYVGLPKEHPESYHSFMFKHFFDHVDIPLE
                     NINILNGMAEDVNAECERYEEKIRFYGKIHLFMGGVGVDGHIAFNEPASSLSSRTRIK
                     TLTEDTRIANSRFFNNDVSQVPKFALTVGVGTLLDAEEVMILVTGHNKALALQACVEG
                     AVNHLWTISCLQLHRRGIVVCDEPATQELKVKTVKYFKELEKNVAR"
     gene            1027..2169
                     /gene="nagA"
                     /locus_tag="PXD18_001769"
     CDS             1027..2169
                     /gene="nagA"
                     /locus_tag="PXD18_001769"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HDL6302180.1"
                     /translation="MNHYALTNCVIYTGEQVLYQHALVVKEDKIDSIVLEENLPLDLQ
                     KIDLKGANLSAGFIDLQLNGCGGVMFNEEITTRTLEIMQETNLRSGTTSYLPTFITSP
                     DEGVKQAVAVMREYLSKHKNQALGLHLEGPYLSVAKKGVHRPEFIREISPEMLDFLCD
                     NGDVITKITIAAENPTADHIKRFNDAGIIVSIGHSNATFAQTKQRIAEGAAFATHLHN
                     AMSPVSNGREGGVVGAVLDSDIYTGIICDGLHVEWGNIRIAKKAKGDKLVIVSDAVAA
                     AGSDIESFIFVGKKVTVKDGKCYDEFGALGGAAITMIESIRNVVQHCDISLNEAIRMS
                     TLYPAKAIGVEETLGSLEAGKIANLAIFDNQFEVKATAVNGQLQWH"
     gene            2251..2565
                     /locus_tag="PXD18_001770"
     CDS             2251..2565
                     /locus_tag="PXD18_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HDL6302181.1"
                     /translation="MQFKDYLATFPTIDHLAGLNVINSGEVIQHIPAIEGKLGSLKLY
                     NALFAKFDGKLTASAAKQGLEWFAEHVEDAKNNVGKHPNIDLLFRVIEQDLSLSLEPI
                     VK"
     gene            complement(2644..3834)
                     /locus_tag="PXD18_001771"
     CDS             complement(2644..3834)
                     /locus_tag="PXD18_001771"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HDL6302182.1"
                     /translation="MTQAIESVLAELKRGVENIYSEEDLITKLKENRPLRIKLGADPT
                     APDIHLGHTVVLNKLRQFQQFGHEVYFLIGDFTGMVGDPSGKNSTRPPLSREDVLRNA
                     ETYKEQIFKILDPQKTKIVFNSEWLGKLGTEGMIRLASNYTVARMLEREDFKNRFTNQ
                     QPIAIHEFIYPLLQGHDSVELKADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPL
                     LVGLDGEKKMSKSLGNYIGVTEAPSEMFGKIMSISDDLMWDWYNLLSFRPLDEIAQLK
                     ADVENGKNPRDVKILLAKEIIARFHDEAAADAAEQEFINRFQKGAIPDEVPEFTFEGE
                     IGLAALLKEAGLVPSTSEAIRSAQQGGVKIDGEKVEDVKQTAQKGTFVYQVGKRKFAR
                     ITVK"
     gene            complement(4197..5501)
                     /locus_tag="PXD18_001772"
     CDS             complement(4197..5501)
                     /locus_tag="PXD18_001772"
                     /EC_number="7.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium ion-translocating decarboxylase subunit
                     beta"
                     /protein_id="HDL6302183.1"
                     /translation="MESIIALFKGMGLMHLELGQAIMIVISLVLLWLAIARKFEPLLL
                     LPIGFGGLMSNIPEAGMAMTALDNLLHSGSAEQLAIIAAKVNSTSLDLHSIKDAIALA
                     APSVQNELEVMAGDMGYTAGVLALFYKVAIGYGVAPLIIFMGVGAMTDFGPLLANPRM
                     LMLGAAAQFGIFATVLGALGLNWLGIIDFTLPQAAAIGIIGGADGPTAIYLASKLAPE
                     LLGAIAVAAYSYMALVPLIQPPIMKALTTEQERKIRMVQLRNVSNREKIIFPIVLLLL
                     VALLLPDAAPLLGMFCFGNLLRTSGVVERLNDTAQNALINIVTIFLGLSVGAKLVADK
                     FLQPQTLGILVLGVIAFGIGTASGVIMAKIMNRFSQHKINPLIGSAGVSAVPMAARVS
                     NKVGQEYDKQNFLLMHAMGPNVAGVIGSAIAAGVMLKYISTM"
     gene            complement(5511..7337)
                     /gene="oadA"
                     /locus_tag="PXD18_001773"
     CDS             complement(5511..7337)
                     /gene="oadA"
                     /locus_tag="PXD18_001773"
                     /EC_number="7.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-extruding oxaloacetate decarboxylase
                     subunit alpha"
                     /protein_id="HDL6302184.1"
                     /translation="MTTQPKKIAITDVVLRDAHQSLFATRLRLDDMLPIASELDNIGY
                     WSLETWGGATFDSCIRFLGEDPWVRLRELKKAMPKTPMQMLLRGQNLLGYRHYADDVV
                     DKFVERSVANGMSVFRVFDALNDPRNMQAALQAVKKHGGHAQGTLSYTTSPVHTLQTW
                     LDVTEQLLEIGVDSLVIKDMSGILTPMAAYELVSEIKKRYDVELHLHCHSTTGMAEMA
                     LLKAIEAGVDGVDTSISSMSGTYGHPATESIVATLQGTPYETGLSIPALEKISAYFRN
                     VRKKYAKFEGQLRGIDSRILVAQVPGGMLTNLESQLKQQNASDKLDLVLQEIPRVRED
                     LGNIPLVTPTSQIVGTQAVMNVLMGERYKTIAKETAGILKGEYGRTPAPVNKALQDRV
                     LEGAEPITDRPADHLPPELEKLVAEVTASAKEKGITLSENMIDDVLIVALFQQVGWKY
                     LENRNNPSAFEPVPSADEAKPAQASAASAPKAQTQSGSAIYTVELEGKAFVVKVSEGG
                     DITNIAPTPATPAPQAVDSAPKSANTLSANAEPVNAPMAGNILKVEVKEGQQVAEGDV
                     LLILEAMKMETQICAAKSGTIQGINVKQGDVVAVNDTLMSIA"
     gene            complement(7377..7631)
                     /locus_tag="PXD18_001774"
     CDS             complement(7377..7631)
                     /locus_tag="PXD18_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxaloacetate decarboxylase subunit gamma"
                     /protein_id="HDL6302185.1"
                     /translation="MAPAELFAEGINLMVAGMGFVMLFLLVLIYAISFISKIINQYFP
                     EPVSIPASKTVPQSPPDDLERLRPVIAAAIAHHRRINGQH"
     gene            complement(7821..9008)
                     /locus_tag="PXD18_001775"
     CDS             complement(7821..9008)
                     /locus_tag="PXD18_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HDL6302186.1"
                     /translation="MSNNNRSALLGAAFLMATSAIGPGFLTQTATFTQTLLASFGFVI
                     LLSILLDIGAQLNIWRIVAVSEKKAQDIANAVLPGAGYFLALLIVMGGLAFNIGNVGG
                     AGLGLNILTGLSPEMGAVVSGAIAVGVFLFHEAGKVMDRFAQIMGFVMIALTIFVAVK
                     ANLPIDDAVVHTFVPEKLDVIAIVTLVGGTVGGYITFAGAHRLLDAGIKGKENLKEVS
                     KSSVSAILIASIMRVVLFLAVLGVVSMGVQLDPKNPAATPFAHVAGDVGLMIFGVVIW
                     AASITSVIGAAYTSVSFITSFSPFIEKHKNCFIVAFIVVSTAVLATIGRPAQVLVFVG
                     TLNGLILPISLGLILLAAHKTKIVGDYKHPVWMTVSGAIVVILMAVLSAMTLSKYISG
                     LMA"
     gene            complement(9283..10020)
                     /gene="pxpA"
                     /locus_tag="PXD18_001776"
     CDS             complement(9283..10020)
                     /gene="pxpA"
                     /locus_tag="PXD18_001776"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HDL6302187.1"
                     /translation="MNHVDLNVDLAEGCGNDHSLLQLVTSANVCCGLHAGDYNEMRKA
                     INWAKENSVRVGAHPSFPDRENFGRTNMQLPDDELKACLLYQLGAAKALCDAENMPMS
                     YVKPHGALYNMAAKDPHLATLIANTVKQFDPNLKLMGLSGSLMLSIAEQHGLETISEV
                     FADRHYLADGSLVPRTRDDAMVESDDEAISQVLQMVLDGTVPTVDGGNVAIKADSICL
                     HGDGEHAVVFAERIKKELQAKGILVKA"
     gene            complement(10007..10920)
                     /locus_tag="PXD18_001777"
                     /pseudo
     CDS             complement(10007..10920)
                     /locus_tag="PXD18_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250478.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
     gene            complement(10917..11564)
                     /gene="pxpB"
                     /locus_tag="PXD18_001778"
     CDS             complement(10917..11564)
                     /gene="pxpB"
                     /locus_tag="PXD18_001778"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HDL6302188.1"
                     /translation="MLTIHHTSEHSLLCLAEPPAELAKQQQIWRVAEQARALDGVLEV
                     VVGMNNFTLFHAIGTDSTRLIQAVQQLWENDQAQAAQSPRLIEIPVHYGGEFGEDLFE
                     VAQFHNTTPEEIIRRHTEPTYTVFMIGFQPGFPYLNGLPQNLHTPRRNVPRTKVPAGS
                     VGIGGRQTGIYPFTSPGGWQLLGRTELPLFDIQHNPPTLLTAGDNVRFVAESITL"
     gene            complement(11658..12482)
                     /locus_tag="PXD18_001779"
     CDS             complement(11658..12482)
                     /locus_tag="PXD18_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HDL6302189.1"
                     /translation="MKKLLLFLLFIGNPIFAKSPELMLVEQYQDQDISGWVMSEKLDG
                     VRGFWDGQQLISRQGYPLNPPDYFIQDFPPFAIDGELFSERGKFEEISSIVRSAQPKG
                     WHKLKLQVFDVPNAQGNLIERLATLENYLKQHPTLHIAIIEQIPIKDKAHLQQFYQSV
                     LEQGGEGVIVRNPNAGYIQGRSAQILKIKPVLDEECTVVAHHKGKGKYTDKLGAITCE
                     NQRGRFRIGSGFKDKERENPPPIGSIITYKYRGVTESGKPRFATFWRIRNDQISEN"
     gene            complement(12616..13440)
                     /locus_tag="PXD18_001780"
     CDS             complement(12616..13440)
                     /locus_tag="PXD18_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302190.1"
                     /translation="MEHFIGLGVAGNFAGHLEQAGEEADFAKVKTVEAVQPKAIFPFY
                     VPAENLGDYQFLSTYPLSNTAINFPSDADNLQIEPEVALICEIGYQDQQVVSLTPTHF
                     AAYNDCSIRRPNANKICEKKNWGASSKGLSAIHLPLDNFNKGGTLDNYNIACFHKRNG
                     ELNTYGIDSPAVEYSYFHQKLLDWIVERMNNQPDEGPMNNISEMLKQANYPTKAIISI
                     GATRYTPFGESNLLQVGDVSMVVVYNVKKYSHSQIEEMAKLETFSEDISALIQTVR"
BASE COUNT         3731 a         2999 c         3047 g         3819 t
ORIGIN      
        1 aaaatgattt ttgggtattg atttttcaat cgataaattt tctgtgatca ggatcacaaa
       61 aatagcagaa aaaatagaaa ttgaagttgt atttcattaa aataataaaa aatgaagtga
      121 tttattcaga attgatattt aaggagagac tatgcgttta attccgttag aaactgatca
      181 cgatgtgagt gtttgggctg ctcgttatat tgttgatcgt atcaatgcat tccaaccaac
      241 caaagaaaaa ccttttgtgc ttggcttacc aaccggcggt acgcctgaaa aaacctataa
      301 agaattaatt aaattatatc aagctggtga agtgagcttt aaaaatgtgg tgactttcaa
      361 tatggacgaa tacgtcggct tacctaagga acaccctgaa agctaccaca gttttatgtt
      421 caagcacttt tttgaccacg ttgatattcc gcttgagaat atcaatatcc tcaacggtat
      481 ggcggaagac gtgaatgcag aatgcgaacg ttatgaagaa aaaatccgtt tttatggtaa
      541 aatccatctg tttatgggcg gggtcggtgt ggatgggcat attgcgttta atgagcctgc
      601 atcttcgctt tcttcccgca ctcgaattaa aacgcttacc gaagatactc gcattgcaaa
      661 ctcacgtttc tttaacaatg acgtaagcca agtgccgaaa tttgctttaa ccgttggggt
      721 tggtacgttg cttgatgccg aagaagtgat gatcttagtg accggccata acaaagcctt
      781 agcattacag gcgtgtgtgg aaggggcggt aaatcatctt tggaccatca gttgcttaca
      841 attacatcgc cgtggtatag tggtgtgtga tgagccggca acccaagagc tgaaagttaa
      901 aacagttaag tatttcaaag agttagagaa aaacgtagct cgctaattct gattttacaa
      961 gcggttaatt ttgtaatatt ttttacaaaa acgaccgcct gttagcattt aaagagaaga
     1021 gagaaaatga accattatgc cttaacaaac tgtgtgattt acaccggtga acaagtgctt
     1081 taccaacacg cattagtggt gaaagaagat aaaatcgact ccattgtttt ggaagaaaat
     1141 ttaccgctgg atctgcaaaa aatcgaccta aaaggagcga atctttcagc cggttttatt
     1201 gacttgcaac tgaacggctg cggtggggtg atgtttaatg aagaaatcac tacccgcact
     1261 ttagaaatta tgcaggaaac caatctgcgt tcaggcacaa ccagctattt accgactttt
     1321 attacctcgc ctgatgaggg agtgaaacaa gcggtggcgg taatgcgtga gtatttgtcg
     1381 aaacacaaaa accaagcact cggcttgcat ttggaaggac cttatctaag tgtggcaaag
     1441 aaaggagtac accgtccgga atttatccgt gaaatcagcc ctgaaatgtt agatttctta
     1501 tgcgataacg gcgatgtaat tacgaaaatc acgattgcag cagaaaaccc gaccgcagac
     1561 catatcaaac gctttaatga tgcaggaatt attgtatcta tcgggcattc caatgccact
     1621 tttgctcaaa ccaaacagcg aattgccgaa ggggcagcgt ttgctacgca tttacacaat
     1681 gcaatgtcgc cggtcagcaa cgggcgtgaa ggcggtgtag taggggcggt gttggatagc
     1741 gatatttaca ccggcattat ttgcgatggc ttgcacgttg aatggggcaa cattcgcatt
     1801 gccaaaaaag ccaaaggcga taaattagtg attgtcagcg atgctgttgc tgccgcagga
     1861 agtgatattg agtcgtttat ttttgtcggt aaaaaagtca cggtgaaaga tggcaaatgc
     1921 tacgatgaat tcggagcatt gggcggtgcg gcaatcacga tgatcgaatc cattcgcaac
     1981 gtagtgcaac attgcgatat tagcctgaat gaagcaatcc gaatgagtac cctttacccg
     2041 gcaaaagcga ttggggtaga ggaaacactc ggctcacttg aagccggcaa aattgccaac
     2101 cttgcgattt tcgataatca atttgaagta aaagcgactg ctgtaaacgg gcaattacag
     2161 tggcattaat tttgctacaa attctaagca taacagcata taatccaaag gcaggcattg
     2221 tgtctgcctt ttatttatag ggagaataac atgcaattta aagattactt agccactttt
     2281 ccaactattg atcatctagc cggcttaaac gtgataaata gcggtgaagt gattcaacat
     2341 attcctgcga ttgaaggtaa attaggttca ctaaaacttt acaatgcact gtttgcgaaa
     2401 tttgatggga aattaaccgc tagtgcagca aaacaagggt tggaatggtt tgccgaacac
     2461 gttgaagatg cgaaaaataa tgtgggtaag cacccgaata ttgatctatt atttagggta
     2521 attgagcaag atttatcttt aagtttagag ccgattgtta aataagattg cactagtgaa
     2581 aaataacaag cggtcattat ctgcaaaatt tttgcaaata atgactgctt gtgtttaaga
     2641 ggcttatttc acggtaatgc gtgcaaattt gcgtttgccg acttggtaaa caaaagtgcc
     2701 tttttgagca gtttgtttca catcttccac tttttcacca tcaattttaa ccccgccttg
     2761 ttgggctgag cgaattgcct ctgaagtgga cggtactaag ccggcttctt tcagtagagc
     2821 cgctaggccg atttcaccct caaaggtaaa ttcaggcact tcatcaggaa ttgccccttt
     2881 ttggaaacgg ttgataaact cttgctctgc tgcatctgct gccgcttcat cgtggaaacg
     2941 agcgataatt tcttttgcca gtagaatttt cacatcacgc gggtttttgc cattttcaac
     3001 atccgctttt aattgtgcaa tttcgtctaa tggacggaat gagagcaggt tgtaccaatc
     3061 ccacattaaa tcgtctgaaa tcgacataat tttgccgaac atttcgcttg gagcttcagt
     3121 tacaccaatg tagttgccga gagatttcga catttttttc tcgccgtcta agccgacaag
     3181 tagtgggagt gtcattgcca cttgtggttt ttgaccggct gatttttgta actcacgtcc
     3241 aactaacaag ttaaaggttt ggtctgtacc acctaattcc acgtcagctt tcagttctac
     3301 cgagtcgtga ccttgtagta gcggataaat aaattcgtgg attgcgatcg gttgttggtt
     3361 cgtgaaacgg tttttgaaat cttcacgttc taacattcga gcaacggtgt agttggaggc
     3421 taagcggatc ataccttccg tacctaactt gcctaaccat tcggagttga atacgatctt
     3481 ggttttttgt ggatctaaaa ttttgaagat ctgctcttta taggtttcgg cattgcgtaa
     3541 cacgtcttca cggctaagtg gcggacgggt agagtttttt cctgatggat cgcctaccat
     3601 accggtgaaa tcaccgatta agaaatagac ttcgtgtccg aattgttgga attgacgaag
     3661 tttgttcagc acaacagtat gacctaagtg aatatccggt gcagttgggt ctgcccctaa
     3721 tttaatacgc aatgggcggt tttcttttaa tttggtgatt aaatcttctt ctgaataaat
     3781 attttccacg ccacgtttaa gttcggcaag gactgattcg atagcttgag tcatttatct
     3841 tccttttagt cttgaatata aaaaatggat ctattatagc ggtatgaatt gaaattgata
     3901 ggctataggc gaaaaaaaac gccgtatttt gtgggggaat acggcgtaaa gagttggagt
     3961 gattacctat tatttttgaa gtgatttaat gataatgatt atcatctgtt aagtcaatac
     4021 tttttttgaa aattttcaat aagaattatt ctcatcaatt aagtaagatg gatactacgg
     4081 caattagtga agaatgtaca gcggaatttt cgtattgtaa gagtgttggt aagcggtatt
     4141 tttagaaaaa acctccgaga gcggttattt ttcggaggtt ttttgcaaat gaggatttac
     4201 atcgttgaaa tgtatttcaa catcaccccc gctgcaatcg cagagccaat cacgccggca
     4261 acgtttgggc ccattgcgtg cattaacaag aagttttgtt tatcgtactc ttgtccgact
     4321 ttgtttgata cccgtgcagc catcggcacg gcagaaacac ccgctgagcc gataagtggg
     4381 ttgattttgt gctgactaaa gcggttcatt attttcgcca taatcacacc gcttgcagtg
     4441 ccgatcccaa aggcaatcac gcccaatact aaaatgccta gtgtttgcgg ttgtaagaat
     4501 ttgtctgcga ccaattttgc ccccaccgat aaccctaaga aaatcgtcac gatattgatt
     4561 aacgcatttt gggcggtgtc gtttaagcgt tctactacgc cactggttcg cagtaagttg
     4621 ccaaagcaga acattcccaa taacggtgca gcatccggca gtaagagtgc cactaataat
     4681 agcaacacga tagggaaaat aattttctca cggttgctta cattacggag ctgaaccatt
     4741 cggattttac gttcttgctc ggtggttaag gctttcataa tcggcggctg aatcagtggc
     4801 actaacgcca tataagaata agccgctacc gcaatcgcac ctaataattc aggggcaagt
     4861 ttgctggcaa gataaatcgc ggtcgggcca tctgccccgc cgataatccc aatcgcagcg
     4921 gcttgtggca atgtgaagtc gataatgcct aaccagttta gccctaatgc acccagtacg
     4981 gtagcaaaaa tcccaaattg agccgcagcc ccaagcatta acattcgagg gttggcaagt
     5041 aaagggccga aatcagtcat cgccccgaca cccataaaga taataagcgg agcaacgccg
     5101 tagccgatag caactttata gaataatgcc aacacaccgg cggtatagcc catatcgcca
     5161 gccattactt caagctcatt ttgaacagag ggagcagcca gtgcgatggc atctttaatc
     5221 gaatgcagat caaggcttgt actatttacc ttagcagcaa taattgccag ttgctcggca
     5281 gaaccgctgt ggagtaaatt gtctaatgcc gtcattgcca tacctgcttc cggaatgttt
     5341 gacatcaaac caccaaagcc aataggcagt agtaaaagcg gttcgaattt tcgggcgatg
     5401 gcaagccaaa gcaacactaa actgatgaca atcataatcg cttgccccag ttctaaatgc
     5461 attagcccca tacctttaaa aagtgcaata atactttcca taccggactc ctaggcaata
     5521 ctcattaaag tatcatttac cgccacaaca tcgccttgtt tgacattaat gccttgaatc
     5581 gtgccggatt ttgccgcaca aatttgggtt tccattttca ttgcttcaag aatcagtaac
     5641 acatcgcctt cagcaacttg ttgcccctct ttcacttcca ctttcaaaat gttccctgcc
     5701 attggagcat tcaccggttc ggcattggct gatagcgtat ttgcagattt tggtgcagaa
     5761 tcgaccgctt gcggagccgg tgttgctggt gttggagcga tattggttat atcgccacct
     5821 tcactcacct tcaccacaaa ggctttgcct tcaagctcaa cggtataaat ggctgaaccg
     5881 gattgtgttt gggcttttgg tgcagaagca gcggaggctt gtgccggttt tgcttcatca
     5941 gcacttggca ctggctcaaa ggcagacgga ttattgcggt tttccaaata tttccagccc
     6001 acttgttgga agagtgccac aatcaataca tcatcaatca tgttttcaga tagcgtaatg
     6061 cctttttctt ttgcacttgc agtcacttct gccactaatt tttccagttc cggcggaaga
     6121 tgatcggctg ggcggtcggt aatcggctct gctccctcaa gcactctgtc ttgcaaggct
     6181 ttgtttaccg gtgccggtgt gcgaccatat tcgcctttta aaatacctgc agtttctttg
     6241 gcgatagttt tataacgttc gcccattaat acgttcatca ccgcttgtgt gccgacaatt
     6301 tgtgaggttg gtgtcaccaa cggaatattg cctaaatctt cacgcacacg aggaatttct
     6361 tgtaaaacca agtctaattt atccgacgca ttttgttgct tgagttggct ttcgaggttg
     6421 gtcagcatgc cacccggcac ttgggcaacc aaaatacggc tatctatacc acggagctgt
     6481 ccttcaaatt ttgcatattt tttacgcacg ttacggaagt aggcagagat tttctccaga
     6541 gctggaatgc tcaagccggt ttcatacggc gtgccttgaa gtgtggcgac aatagactcg
     6601 gttgccgggt gaccgtaagt gccggacatt gatgaaatgg aggtatcgac accatcgaca
     6661 ccggcttcaa tcgctttgag caacgccatt tcagccatac cggtggttga atggcaatgg
     6721 agatgtagct caacgtcgta gcgtttttta atttcgctga ctaattcata ggctgccatt
     6781 ggggttaaaa tgcccgacat atctttgatc accaacgaat ccacgccaat ttccaataat
     6841 tgctcggtta catccaacca cgtttgtagg gtatgaacag ggctggtggt gtaactcaaa
     6901 gtaccttgtg cgtgcccgcc gtgttttttg accgcttgta atgcggcttg catattgcga
     6961 gggtcgttga gggcatcaaa tacacggaac acactcatac cgtttgccac cgaacgctcg
     7021 acaaatttat ctaccacatc gtcggcataa tgacgataac ccaataagtt ttgcccacgt
     7081 agcagcattt gcattggggt tttcggcatt gcttttttca gctcacgtaa acgcacccac
     7141 ggatcttcgc ctaaaaaacg aatacaactg tcaaaagttg ccccgcccca agtttctaac
     7201 gaccaatagc cgatattatc cagctcggag gcaatcggta acatatcgtc taagcgtaaa
     7261 cgagtcgcaa aaagggattg gtgtgcatca cgcaaaacca catcggtaat cgcaattttt
     7321 ttcggttgag ttgtcataat caaattcctt ctaattattt tatttttgaa atcttgttaa
     7381 tgttgcccgt taattcgacg atgatgagca atcgcagcgg caatcacagg gcgtaaacgc
     7441 tctaaatcat ctgggggaga ttgaggcaca gttttagagg ctggaataga aacaggttcg
     7501 gggaaatatt gattgataat cttggaaata aagctgatgg cataaattaa aaccagcagg
     7561 aacagcataa caaatcccat tccggctacc attaaattta taccttccgc aaagagttct
     7621 gcaggtgcca taatttatcc ttaaaatgta gaaatgatga agaaaatgta gaaaaaattc
     7681 agatttattt caaattattt agcctcaaaa tgagtggtag atcacaaact ttaaacgcaa
     7741 gcggtcagat tttacaaatt ttttacaaga gtagttaaaa tttgcaaaac ctgaccttag
     7801 gttagcttga agctaagtcg ttatgccatt agccccgaaa tatattttga aagggtcatt
     7861 gcacttagca ccgccattag aatcaccaca atcgcccctg aaacggtcat ccacacaggg
     7921 tgtttgtagt cgcccacaat cttggttttg tgagctgcca gcagaattaa cccgagggaa
     7981 atcggtagaa ttaagccgtt aagcgtccct acaaacacca agacttgtgc cggtctgccg
     8041 atggttgcca gcacggcggt tgaaaccaca ataaaggcga caatgaaaca gtttttgtgt
     8101 ttttcgataa atggcgagaa tgaagtaatg aaggaaaccg aggtataagc cgccccaatc
     8161 acagaggtaa tggaggctgc ccaaatcacc acgccgaaga tcatcaaacc gacatcgccg
     8221 gcaacgtggg caaatggggt agccgcaggg tttttcggat caagttgcac gcccattgac
     8281 accacgccca gcaccgctaa aaacagtacc acacgcataa ttgaggcgat taaaatggct
     8341 gacaccgagc ttttgctcac ctcttttaaa ttctctttgc ctttaatgcc tgcatcaagc
     8401 aaacggtgcg caccagcaaa ggtgatgtat ccaccaacag ttccgcccac tagcgtgaca
     8461 atcgcaatca cgtctaattt ttccggcaca aaggtatgca ccaccgcatc gtcgattggc
     8521 agattggctt ttacggcaac gaagatggtt aaagcaatca tcacaaagcc cataatttgt
     8581 gcaaatctgt ccatcacttt accagcttca tggaacagga acacgcccac ggcaatcgca
     8641 ccgctgacca ccgcacccat ttcaggggaa agtccggtga gaatgtttag ccctaaacct
     8701 gcaccgccca cgttgccgat attaaaggct aaaccgccca tcacgataag cagagccaga
     8761 aagtaacctg cccccggcaa tacggcattg gcgatgtctt gagctttctt ttccgatact
     8821 gctacaattc gccaaatatt cagttgagca ccgatatcaa gcaagatcga gagtaagatc
     8881 acaaagccga agctggcaag tagggtttgg gtgaaggtgg ctgtttgggt taagaacccc
     8941 ggcccgatgg cggaggtcgc cattaaaaat gctgccccga gtagggcgct acggttgttg
     9001 tttgacattg tgttggttcc ttttttgttg ttaatgagtc attattcgtg gatttatcat
     9061 ggtaatattc ccctctttag caaagagggg ttaggggaga tttggcagta gaactcatcg
     9121 aagtgagaga gttaataatg ctcaatttaa cctcttgaaa ttacttattt tctccgtaaa
     9181 tcgcttctgt caaatctccc ccagcccctc ttttctaaag aggggagttc gatctccaag
     9241 agttttattt ctggttttcc gtccattttg actaaaacag gatcaggctt tcaccaaaat
     9301 cccctttgcc tgtaactctt ttttaattcg ctcggcaaat accacggcgt gttcgccgtc
     9361 accgtgtaag caaatgctgt cggctttaat cgccacatta ccaccatcaa cggttggtac
     9421 agtgccgtct aacaccattt gcaagacttg gctgatcgct tcatcatcgc tttctaccat
     9481 tgcatcatca cgggtgcgag gcacgagcga gccgtcagct aaatagtggc ggtcggcaaa
     9541 gacttcggaa atggtttcca aaccgtgctg ctcggcaatg ctcaacatca ggctgccgga
     9601 taagcccatc agtttgaggt tgggatcgaa ctgtttgacc gtattggcga taagggtggc
     9661 aaggtgaggg tctttggcgg ccatattgta taaagcgccg tgcggtttaa cgtagctcat
     9721 cggcatattt tccgcatcac ataaggcttt ggcggctccc agttggtaga gcagacaggc
     9781 tttaagttca tcatcgggca gttgcatatt ggtacgccca aagttttccc tatctggaaa
     9841 actcgggtga gcgccaactc gcacgctgtt ttccttcgcc cagttaatcg ctttacgcat
     9901 ttcattgtaa tcaccggcgt gcaagccaca gcagacattc gccgaagtaa cgagctgtaa
     9961 taatgaatga tcgttgccac aaccttcggc aagatcgaca tttaaatcaa cgtgattcat
    10021 tcgcttttct ccgaattgtt tccaaataat tttgatcttt ttgataaatt tcgaccgctt
    10081 gttcacggct tacttgctca aattgcaccg ttgagccgaa cggattttgt gccaaccgcc
    10141 cgagatcggc ctgaataatg caggcaattt tcggataacc accggtggtt tgggcatctg
    10201 ccatcagcac aatcggctgg ccgtccggcg gcacttgcac cgtaccactc ggggctgcgt
    10261 aggagagcat ttcaagggaa gcggtcaatt ccaacgcttt ttctgcaaaa cggtagccca
    10321 tacggttgct gttgttttgc agttgccacc cttgttgcca aaagcgttca cggctatctg
    10381 cggtaaaggc ttcatattcg ctcgaagcgg ttgcccgaat gcgtgaggtg aaatcaatcg
    10441 gctcaatcga catcaaagaa agtcggctgt ctctgcggcc tgtggcgatg ttatcgccgg
    10501 cttttaacat tctgccttga aaaccgccaa attgagcttt gagagcggta cttgccgaac
    10561 ctaacacctg cggcaccaga aaaccgcctg ccacgcataa ataggcgtaa ttgccgagaa
    10621 caatccgttt tatcgtcagc gtttgacggg cgttggcagt gtagcggtaa taggaaaaaa
    10681 ccggcgtgcc gtccagctcc gcctccacca atgcaccggt gaggcaaaat ggcgtgtcgc
    10741 aatcacgcca agggtaagtt caatcgcagg tgcattattt gcatttttta acaataaatt
    10801 acccgcttgt aaggcaaggc tgtccatcgc accgccgtgg ctcacgccta aatggcgata
    10861 accataacgc cctaaatctt gaatgtgggc aaaaccctgt attatttcga tataaatcat
    10921 agcgttatac tctccgccac aaatctaaca ttatcgccgg ctgtaagtag cgttggcgga
    10981 ttgtgttgaa tatcaaacaa cggtaactcg gttcgtccta acagttgcca gccacctggt
    11041 gaggtaaagg gataaatgcc tgtttgcctg ccgccgatgc cgaccgaacc ggcagggact
    11101 ttggtgcgag gcacgtttcg gcgtggggtg tgtaaatttt gcggtaagcc gttgaggtaa
    11161 ggaaagccgg gttgaaagcc gatcataaac acggtgtaag tcggttcggt atgacggcgg
    11221 ataatctctt cgggagtggt attgtggaat tgggcgactt caaacagatc ttcgccaaat
    11281 tcaccgccgt aatggacagg gatttcaatc aggcgtgggg attgtgcggc ttgggcttgg
    11341 tcgttttccc agagttgttg aaccgcttgg ataaggcgtg tgctatcggt gccaatggcg
    11401 tgaaataggg taaaattgtt cattcctacc accacttcca acacgccatc taaggctctt
    11461 gcctgttctg ccacccgcca aatctgttgc tgtttggcaa gctctgcagg cggttcggct
    11521 aagcagagca gggaatgttc gctggtatga tgaatcgtca gcataattgc cctcaaattg
    11581 ttacaaaaag gtaacaactt tttacgctga tatatccaga ctgtcaattt tattttgttg
    11641 aaaatgtgaa atagctctta attttcagaa atttgatcat ttcttattcg ccaaaacgtt
    11701 gcaaatctgg gcttgcctga ttctgtgaca cctcgatatt tataggtaat gattgagcca
    11761 atcggtggcg gattttctcg ttctttatct ttaaaaccgc tgccaatccg aaaacgtcca
    11821 cgttgatttt cacaagtgat tgccccgagt ttatcggtat atttcccttt gcctttatga
    11881 tgggcaacca cagtgcattc ctcatctaaa accggtttga ttttcaaaat ttgggcagaa
    11941 cgaccttgaa tatagcctgc attcgggttg cgaacgataa ccccttcgcc accttgttcc
    12001 agcacagatt ggtaaaattg ttgaaggtgg gctttatctt taatcggaat ttgctcaata
    12061 atagcgatat ggagcgttgg atgttgcttc agataattct ctaaggtcgc cagccgttca
    12121 atcaaattcc cttgtgcatt tggcacatcg aacacctgta atttcagctt gtgccaacct
    12181 ttgggctgag cggaacgcac aatgcttgaa atttcctcaa atttgccccg ttcgctaaac
    12241 agttcgccgt caatcgcaaa aggagggaaa tcttgaataa aatagtcggg tggattgagc
    12301 ggataacctt ggcggctgat gagctgttga ccgtcccaaa agcctcgcac gccatcgagt
    12361 ttttctgaca ttacccagcc actgatgtct tgatcttgat attgctcaac gagcattaac
    12421 tcgggcgatt tggcaaaaat agggttacca atgaagagta ggaataagag cagttttttc
    12481 atagtctctc cgaaatagtg cctccgaata tgcaaggcac tataaaggaa agcgtgcaaa
    12541 cagtcagaaa tgaatctcaa tttttcgacg cagatcgcaa aattttccga aaaactgatc
    12601 gcttgagtga gaaatttaac gtactgtttg aattaaagca gaaatatcct cgctaaaggt
    12661 ttccaacttc gccatttctt caatttggct atgagaatat ttcttcacat tgtaaacgac
    12721 caccatactt acatcaccta cttgcaataa attactttcg ccaaaaggcg tgtagcgtgt
    12781 tgccccaatg ctgataatcg ctttagttgg gtagtttgcc tgttttaaca tttcggaaat
    12841 gttgttcatc ggaccttcat cgggctgatt attcattctc tctacaatcc aatcgagcaa
    12901 tttttgatgg aaatagctgt actccaccgc agggctgtcg atgccgtagg tattcagctc
    12961 gccattacgt ttatggaaac aagcgatgtt gtaattatcc agcgtgccgc ctttgttgaa
    13021 gttatctaac ggaagatgaa ttgccgaaag ccctttagac gaagcccccc agtttttctt
    13081 ttcacagatt ttattcgcat tcggacggcg gatagagcag tcattgtaag ccgcaaaatg
    13141 ggttggcgtg agcgaaacca cttgctgatc ttggtagcca atttcacaaa ttaacgccac
    13201 ttcaggctca atttgcagat tatcagcatc actcgggaaa ttaatcgcag tatttgaaag
    13261 cggataggtg gataaaaact gataatcccc caaattttcc gccggcacat aaaacgggaa
    13321 aatcgccttt ggctgcactg cttccactgt tttcactttc gcaaaatccg cctcctctcc
    13381 ggcttgttct aaatgtccag caaaattgcc ggccacgcct aaaccgataa agtgttccat
    13441 aatctactcc ttaattggta aaagttggat aaaattttac cgcttgtaac caaaaattgc
    13501 gaatgtttat tttgatctga ttgatagaaa attattgaat tgagattaaa tttagccata
    13561 ttttgaacat aaaattagcg ctttgttata aaaaca
//
LOCUS       DANLXD010000074        13586 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.074, whole genome shotgun sequence.
ACCESSION   DANLXD010000074 DANLXD010000000
VERSION     DANLXD010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13586)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13586)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13586
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.074"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(25..1564)
                     /locus_tag="PXD18_001781"
     rRNA            complement(25..1564)
                     /locus_tag="PXD18_001781"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            complement(1918..3879)
                     /gene="recD"
                     /locus_tag="PXD18_001782"
     CDS             complement(1918..3879)
                     /gene="recD"
                     /locus_tag="PXD18_001782"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HDL6302191.1"
                     /translation="MLNLLLELKQEKAISDLNYQFARFIDNKQKPYGYSPLEQDLAVL
                     AAALVSYQVGLGHTALRLENLSLSSLFELNSKPQTYHLLEQILQKIEQIPPLEWQSVL
                     KNHIAFSYSPETIKPMLFQNSLLYFYRYWQAEHRIAGYLQQAVDFSEKFANTELNQSI
                     LNQLFTGKAQTIDWQKIAVATALEKQFSLISGGPGTGKTTTVVKLLLGLQLKQQALQK
                     PYLQIALAAPTGKAAARMKESLESKLAEEKGLSEELKRSIPTEAVTIHRLLGARPLTE
                     KTKYHTKNPWHYDLVVLDEASMIDLSMMEKVVQALKPNSRLIMLGDKDQLASVEAGSI
                     MGELGSFIDNGYSQSHCDYLKAVTDYQIEAGNALPIGDCLSHLKHSYRFGEKAWIGEL
                     ANAVNDQKINLSWEIFDKYKNSDKLENFCYPETKETTDKSSWIEKSVQMVVDKAVELY
                     RDYLQAVQKREKNPDSVSVKAIFEKFQKVRILSALRVSELGVERLNMAIAEGLRKASL
                     VKFNHSRDRYIGKPILMTENMPINSIASGDVGIILPDENGESRVYFDSLQENREHHSL
                     PLGRVSNYEAAYIMTVHKSQGSEFEHTVLVLPHSISPVLTKELIYTAITRAKDKFTLF
                     GSEKVWKYSVGAKTERQSGLKEQIRGKFS"
     gene            4009..5133
                     /gene="alr"
                     /locus_tag="PXD18_001783"
     CDS             4009..5133
                     /gene="alr"
                     /locus_tag="PXD18_001783"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDL6302192.1"
                     /translation="MKPATATIDSQALRHNIRLIKSFAPQQKLLAMIKANAYGQGLLP
                     AAGTLADMVDGFGVARLREALEIQETGYTGKIVLVEGFFDREELLKTLSRKFDTVIHN
                     LEQLELLEQVAKEWQAEQQKGFWTRKAKIYFPINIWLKIDTGMHRLGIHPEQVDHFVE
                     RLKNCALVNSISFVSHFSRADELDCGYTEKQIAVFEQATQKYQDHDRSISASSGILYW
                     KQAHYDWVRPGIIMHGISPHYTPITDLGFKPVMTLSSSLIAVRTHKAGEPVGYGGAWV
                     SPKDTKLGVTAMGYGDGYPRNAPEGTPVLINGRIVPIVGRVSMDMLTVDLGAESQDKV
                     GDKAIFWGEQLLIEDVAKHIGVISYELITKLTPRVIFEYK"
     gene            complement(5196..5837)
                     /gene="sodA"
                     /locus_tag="PXD18_001784"
     CDS             complement(5196..5837)
                     /gene="sodA"
                     /locus_tag="PXD18_001784"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005708524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Mn]"
                     /protein_id="HDL6302193.1"
                     /translation="MAYTLPELGYAYDALEPHFDAKTMEIHHSKHHQAYINNANAALE
                     AHPELLEKCPGALIKDLSQVPAEKRIAVRNNVGGHVNHTLFWKGLKTGTTLQGALKEA
                     IERDFGSVEAFQSEFEKAATTRVGSGWAWLVLEEGKLAVVSTANQDNPLMGKEVAGVS
                     GYPILVLDVWEHAYYLNYQNRRPDFIKAFWNVVNWDEAARRFEEKVATCGCAK"
     gene            6281..8737
                     /gene="thrA"
                     /locus_tag="PXD18_001785"
     CDS             6281..8737
                     /gene="thrA"
                     /locus_tag="PXD18_001785"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase I"
                     /protein_id="HDL6302194.1"
                     /translation="MRVLKFGGTSLANPERFMQAAEIIEKAHLADQAAGVLSAPAKIT
                     NHLVAIVDKAIAGESFQSNLSEATEIFHNIINGLYATNNHFAKEALLALVEAELNQIQ
                     QVAAEAAQTKSLSDKIAATIHCRGEKLSIAMMQAWFEAKGYEVTRIDPVEKLLAHGSY
                     LESSVDIAESTKRVDAGSIPKKNIVLMAGFTAGNEQGELVLLGRNGSDYSAACLAACL
                     KADVCEIWTDVDGVYTCDPRLVPDAVCLETMSYQEAMELSYFGAKVIHPRTIGPLVPL
                     NIPCLIKNTGNPDGKGTLIDGNVANDNLKVKGITNLDNVAMFNVSGSGMQGMVGMAAR
                     VFSTMSKAGISVILITQSSSEYSISFCVPAKSAEKALAALNTEFAQELSENLLDPIDI
                     IKDLSIVSVVGDGMRTAKGIAARFFSALAQANISIVAIAQGSSERSISAVVPLNKAIE
                     AVKATHKSLFNSKRVVDMFLVGVGGVGSELIEQVKQQKEFLAKKDIEIRVCALANSDK
                     MLLNENGLNLDNWKEDLEKAIQPSDFDVLLSFIKFHHVVNPVFVDCTSAQSVANLYAR
                     ALKEGFHVVTPNKKANTSGYDYYLEMRENARQSQHKFLYETNVGAGLPVIENLQNLLA
                     AGDEVEKFEGILSGSLSFIFGKLEEGLTLSQATLIAKEKGFTEPDPRDDLSGADVARK
                     LLILVRETGLPLEFEDIKIEGVLPKGFSEGMSRDEFLQALPSLDEEFSKRVEAAKAEG
                     KVLRYVGSITGDKCRVAIEAVDENHPLYKVKDGENALAFLTRYYNPIPLLLRGYGAGN
                     SVTAAGIFADILRTLQGGVN"
     gene            8737..9684
                     /gene="thrB"
                     /locus_tag="PXD18_001786"
     CDS             8737..9684
                     /gene="thrB"
                     /locus_tag="PXD18_001786"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HDL6302195.1"
                     /translation="MALRIYAPASSANISVGFDSLGAAISPIDGSLLGDVVQIEESEQ
                     QFELESAGYFVRKLPKEPQKNIVYQAYVLFSERLKLRNGSVKNLRLTLEKNMPIGSGL
                     GSSACSIVAALVALNKFHDEPFSKMELLEMMGELEGRISGSIHYDNVAPCYLGGLQLM
                     TQSLGNICQPLPFFDEWYWVLAYPGVEVSTAEARAILPKSYTRQDMIQQARYLGSFVH
                     ACHTHQDILAATMMKDLIAEPYREDLLPNFPAVRQGCKDLGALAVGISGSGPTMFAIA
                     PDLEHAQRLVSYLEKEYLQNNEGFIHICKVDNQGARELK"
     gene            complement(9799..11175)
                     /gene="cysS"
                     /locus_tag="PXD18_001787"
     CDS             complement(9799..11175)
                     /gene="cysS"
                     /locus_tag="PXD18_001787"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HDL6302196.1"
                     /translation="MLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTF
                     VSFDVIARYLRYSGYNLRYVRNITDVDDKIIKRALENNETCDELVDRMIAEMHKDFDA
                     LNILRPDVEPRATKHIPEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNL
                     EQLQAGARVEIKSIKKNPMDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELG
                     EHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFS
                     IRHMLGLYDAESLRYFFLTAHYRSLLDYSIDNLDLARSALERLYTALRGCDVSGEAIG
                     EHYVEAFKTAMDDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGL
                     LEQDPDAFLKGDANDDETAEIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVLEDTP
                     NGTIWRKA"
     gene            11331..11840
                     /locus_tag="PXD18_001788"
     CDS             11331..11840
                     /locus_tag="PXD18_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL6302197.1"
                     /translation="MITLHTNFGDIKIELNFEKAPITAKNFEDYAKEGFYNGTIFHRV
                     IDGFMIQGGGMTAGMAEKPTKDPIQNEANNGLSNKRGTIAMARTSDPHSASSQFFINV
                     ADNTFLDYRSKEMFGRSVVQDWGYAVFGEVVEGMDVVDKIKGVKTGNKGFHQDVPVED
                     VVIESVSVA"
     gene            complement(11932..12861)
                     /locus_tag="PXD18_001789"
     CDS             complement(11932..12861)
                     /locus_tag="PXD18_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDL6302198.1"
                     /translation="MEIALLLADKILQLTLMVLLGYLIVKTKLLKSEHSYPISVIGLY
                     IISPAMLITAFQVDYTTEILNGLYLAFLISVLLNGLLILLGWLLKRALKLDNIEQATA
                     IYSNSGNLIIPIVASLFGNEWVIYSTAFIVVQNVLFWSHLRLLICGKGNVPFRKMIFN
                     INIIAIVIGMMLFLLHIKLPATLANTLSTLGHMLGPLAMLVAGMLIAAIPFKEIITDK
                     RIYLVAFLRLIFIPLILLAVIKLGGFASWIENGKTVVMITFLATISPSAATATQMAVA
                     YGQDAKKASAIYGVTTLLCVFTMPLIIWLYQFL"
     gene            complement(12864..13541)
                     /gene="fdhD"
                     /locus_tag="PXD18_001790"
     CDS             complement(12864..13541)
                     /gene="fdhD"
                     /locus_tag="PXD18_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012621653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HDL6302199.1"
                     /translation="MMATPANLEDFALGFSLAEGILNAPSELYGLDVIEQENGVEIQL
                     EISSRQFVALKDKRRSMAGRTGCGICGVEQLEQVNQSCKIVKKNNRLQNVNPLILEDC
                     LLQLENAQFLSKETGASHAAAFFTPDGKLLAIREDVGRHVALDKLIGWYAKADFPIGF
                     VFVTSRASFEMVQKCLAVGIEMLCAISATTEMAVNMARENQFTLLAFARKGKATIYAG
                     EERLALN"
BASE COUNT         3860 a         3051 c         2767 g         3908 t
ORIGIN      
        1 acttgctgtc gttctcgatt ttggtaagga ggtgatccaa ccgcaggttc ccctacggtt
       61 accttgttac gacttcaccc cagtcatgaa tcataccgtg gtaaacgccc ccctttcggt
      121 taagctatct acttctggta caacccactc ccatggtgtg acgggcggtg tgtacaaggc
      181 ccgggaacgt attcaccgca acattctgat ttgcgattac tagcgattcc gacttcatgg
      241 agtcgagttg cagactccaa tccggactta gacgtacttt ctgagattcg ctccccatcg
      301 ctggctcgcc gccctctgta tacgccattg tagcacgtgt gtagccctac tcgtaagggc
      361 catgatgact tgacgtcatc cccaccttcc tccggtttat caccggcagt ctcctttgag
      421 ttcccgacct aatcgctggc aacaaaggat aagggttgcg ctcgttgcgg gacttaaccc
      481 aacatttcac aacacgagct gacgacagcc atgcagcacc tgtctcatgg ttcccgaagg
      541 cactctcata tctctacaag attccatgga tgtcaagagt aggtaaggtt cttcgcgttg
      601 catcgaatta aaccacatgc tccaccgctt gtgcgggccc ccgtcaattc atttgagttt
      661 taaccttgcg gccgtactcc ccaggcggtc gatttatcac gttagctacg ggcaccagag
      721 ttaaacccca atccccaaat cgacagcgtt tacggcgtgg actaccaggg tatctaatcc
      781 tgtttgctcc ccacgctttc gcacatgagc gtcagtacat tcccaagggg ctgccttcgc
      841 cttcggtatt cctccacatc tctacgcatt tcaccgctac acgtggaatt ctacccctcc
      901 ctaaagtact ctagttgtcc agtctgaaat gcaattccca ggttaagccc ggggctttca
      961 cacctcactt aaacaaccgc ctgcgtgccc tttacgccca gttattccga ttaacgctcg
     1021 caccccccgt attaccgcgg ctgctggcac ggagttagcc ggtgcttctt ctgtgattaa
     1081 cgtcaatcga ctgttctatt aaaacaatcg ccttcctcgt caccgaaaga actttacaac
     1141 ccgaaggcct tcttcattca cgcggcatgg ctgcatcagg gttcccccca ttgtgcaata
     1201 ttccccactg ctgcctcccg taggagtctg gaccgtgtct cagttccagt gtggctggtc
     1261 atcctctcag accagctaga gatcgcgggc ttggtgagcc tttacctcac caactaccta
     1321 atcccacttg ggctcatctt atggcaggtg gccaaatggt cccacccttt agtcctaaga
     1381 cattacgcgg tattagctac cgtttccagt agttatcccc ctccataagc cagattccca
     1441 agcattactc acccgtccgc cactcgtcac ccaaggagca aactcctatg tgctaccgtt
     1501 cgacttgcat gtgttaagcc tgccgccagc gttcaatctg agccatgatc aaactcttca
     1561 attcaaaaag tttaatcgct caatactgct gacataaaat cgcacttcca aatttaaacc
     1621 taattaaaat taagttaaaa gaaagtaatg aatttctagt tagcacctat taagacttca
     1681 aaattaaaaa aatgtttttc aatcaagtca atcaacaagt gcccacacag attgtctgat
     1741 aaattgttaa agaacaaaaa gaaacgacgc actggaaatc aattttaaat cgttcacaac
     1801 agtgcgtcgt tgtgtgctgc gtattatagg gaaaaacaaa aacaacgcaa gcggtttttg
     1861 taaaaaattt gaaaaaaatg accgcttgcg tatttttacg gcaaaacgag tattaattta
     1921 gctaaacttg cctcttattt gttcttttag cccactttgt ctttcggttt tggcaccaac
     1981 actgtatttc caaacttttt cgctaccaaa taaggtaaat ttatcttttg cccttgtgat
     2041 tgcggtgtaa atcaactctt tcgtcagcac cggggaaatc gaatggggca acaccaatac
     2101 cgtatgttca aattcagaac cttgcgattt atgcacagtc ataatataag ctgcttcata
     2161 atttgaaacc ctacctagag gcaaactatg gtgttctcta ttttcctgta aggaatcaaa
     2221 ataaactcgg ctttctccat tttcgtccgg caaaatgatg ccgacatcac cgctggctat
     2281 gctatttatc ggcatatttt ctgtcattaa aatcggtttt ccgatatagc ggtctcggct
     2341 atgattaaat ttcactaagc tagctttccg caagccttcc gcaatcgcca tattaagacg
     2401 ttcaaccccc agttcactta cccttaaggc tgataaaatt cggacttttt gaaatttctc
     2461 aaaaatcgct ttcacactca ctgaatctgg atttttctcc cgtttttgaa ccgcttgtaa
     2521 ataatcacga taaagttcaa ccgctttatc caccaccatt tgcacacttt tttcaatcca
     2581 gcttgattta tccgttgtct ctttcgtttc cggataacag aaattttcta acttatcact
     2641 gtttttatat ttgtcgaaaa tctcccacga aaggttaatt ttttgatcat ttactgcatt
     2701 tgcaagctct ccaatccagg ctttttcgcc aaatcgatag ctatgtttta agtgagataa
     2761 acaatcacca atcggcaacg cattaccggc ttcaatttgg tagtcggtaa cggcttttaa
     2821 gtaatcgcaa tgggattggc tataaccatt atcaataaaa gagccaagtt cccccataat
     2881 tgaaccagct tccacagaag caagctgatc tttatctccc agcattatca agcgagagtt
     2941 tggtttgagc gcttgaacaa ctttctccat cattgataaa tcaatcattg aagcctcatc
     3001 taatacgacc aaatcatagt gccacggatt tttggtatga tatttggttt tctcagttaa
     3061 tggtctcgca ccaagcaagc gatgaatagt cactgcttca gttggaatag agcgttttaa
     3121 ctcctcagat aacccctttt cttccgccaa cttgctttcc agcgactctt tcattcttgc
     3181 tgctgctttt ccggttggtg cagccagagc gatttgcaaa tatggtttct gtagtgcttg
     3241 ctgttttaat tgcagcccga gtaataattt tactaccgta gttgtttttc cggttcccgg
     3301 cccacctgaa attaagctaa actgcttttc taatgctgtt gcaacggcaa tcttttgcca
     3361 gtcgatagtt tgagctttcc cagtgaatag ttggttgaga atgctttggt ttaattcggt
     3421 atttgcaaat ttttccgaaa aatcaaccgc ttgttgtaaa taaccggcaa tgcgatgctc
     3481 cgcttgccag tagcgataaa aatagagcaa gctgttttgg aataacatcg gtttaattgt
     3541 ttcgggagaa tagctaaaag cgatatgatt tttcagcaca ctctgccatt caagcggtgg
     3601 aatttgctca attttttgca aaatttgttc gagcaaatga taagtttgtg gcttgctatt
     3661 taattcaaaa agagaagaaa gactgagatt ttccaaacgt aatgccgtat gcccaagtcc
     3721 cacttggtaa gaaaccaacg cagcggctaa cacagctaaa tcttgctcca aaggcgaata
     3781 cccatagggt ttctgcttat tatcaataaa acgggcaaat tgataattta agtcagaaat
     3841 cgccttttct tgtttaagtt ccaataataa attcagcata atcaaacctt aaatcgacca
     3901 cctaacatta agtgataata ctaatctttt ttgcattatt ttctaaggga ttttttattt
     3961 taggcgtata atttagcctt tcttgtgatt ttaactatgt agataagtat gaaaccagca
     4021 acagcaacca ttgatagtca agccctccgc cataatattc gcctgatcaa atctttcgct
     4081 ccacagcaaa aattattggc gatgatcaaa gccaatgctt acgggcaagg cttattgccg
     4141 gctgccggca cattagcaga tatggttgat ggctttggag ttgcccgttt gcgtgaagcc
     4201 ttagaaattc aagaaaccgg atacacaggc aaaattgtgt tagttgaagg tttttttgac
     4261 cgagaagagc tactcaaaac cctttcccgc aagtttgata ccgtcattca taacctcgaa
     4321 caactggaat tactcgagca agtagcaaaa gaatggcagg cagagcaaca aaaaggcttt
     4381 tggactcgta aagcgaaaat ctacttcccg attaacattt ggctaaaaat cgacaccgga
     4441 atgcaccgct taggcattca cccggagcaa gtcgatcact ttgttgaacg tttgaaaaat
     4501 tgtgccttgg tcaattcaat cagctttgtg agtcatttta gccgtgccga tgaactcgat
     4561 tgtggctata ccgaaaaaca aattgcggtg tttgagcaag ctacgcaaaa atatcaggat
     4621 cacgaccgca gtatttccgc ctcaagcggt attctttatt ggaaacaggc tcattatgat
     4681 tgggttcgcc cgggtattat tatgcacggc atttctcccc actatacgcc gattaccgat
     4741 ttaggtttta agccggtaat gacgctctcc tcttccctga tcgctgtgcg tacccataaa
     4801 gccggcgagc ctgtaggcta tggtggtgct tgggtaagcc ctaaagatac caaactcggc
     4861 gtgactgcaa tgggctacgg cgatggctac cctcgcaatg ctcctgaagg tacccctgtg
     4921 ttgattaacg gtagaatagt gccgattgtc ggtcgagttt cgatggatat gctgacggtc
     4981 gatttaggtg cagagagcca agataaagtg ggcgataaag ccattttttg gggagagcaa
     5041 ctattaattg aagatgtggc gaaacacatt ggcgtgatta gctatgagct gattactaaa
     5101 ctcactcctc gtgtgatttt tgaatataaa tagacaacaa gcggtaaaat tttcaacaaa
     5161 ttttaccgct tgtatcttat tcaagatcga aaatattatt tcgcacaacc gcaggttgct
     5221 actttttctt caaaacggcg agcggcttcg tcccagttta caacgttcca gaatgcttta
     5281 atgaaatccg gacggcggtt ttggtagttt aagtagtaag cgtgttccca aacgtctaag
     5341 actaaaatcg gatagcctga aacgcctgcc acttctttac ccattagtgg gttgtcctgg
     5401 ttagcggttg aaacaacggc taatttaccc tcttctaata ctaaccacgc ccagcctgaa
     5461 ccaacacgag tagtcgctgc tttttcaaat tctgattgga aagcttcaac tgaaccgaaa
     5521 tcacgctcaa tcgcttcttt taatgcacct tgtaaggtag tgcctgtttt taaacctttc
     5581 cagaataaag tgtggtttac atgaccacct acgttgttac gcactgcaat acgtttttct
     5641 gcaggcactt ggctcaaatc tttgattaat gcacccggac atttttctaa taattcaggg
     5701 tgagcttcta atgctgcatt tgcattgttg atgtaagctt ggtgatgttt agaatggtgg
     5761 atttccattg ttttagcatc gaaatgtggc tctaacgcat cataagcgta gcctaattct
     5821 ggtaatgtat atgccatagt taattcctct caaatagtaa ataggttaat cagagttaaa
     5881 ctccgagtac attttatcaa gaaacacaca aaaaatgcac atttttttga tctagaacaa
     5941 aattatttca ctatctaatt tagaaaggtt cctaatcaaa ttcttgcttt taattgtttt
     6001 atatagaaag acaaagaaat ttaaaaaaat gtggtgaaaa acagcgttaa gcccattgac
     6061 aaaggcatta ttttcacgca ttcttgaacc attattcact ctcttgaccg agattccgcc
     6121 aatgaattgt tttaatatga tgacaacgat tattaccacc attatgtcac caacatagtg
     6181 cgggttttaa ttggctgaaa taatgaaaga ataaaccgaa aacccgctac aagcgggttt
     6241 ttttgtataa aaatttacaa ataatttatc aggagtaact atgcgagttc ttaaatttgg
     6301 aggcacttct cttgccaacc ctgaacgctt tatgcaagcg gcagagatta tcgagaaagc
     6361 tcatttggca gatcaagctg ccggcgtatt atccgcccca gccaaaatta ccaatcatct
     6421 tgtcgctatt gtagataaag cgattgccgg tgaatcattt caatctaacc tttctgaagc
     6481 taccgagatt ttccacaaca tcattaacgg cttatatgct acaaataatc actttgctaa
     6541 agaagcactg ttagccttag tggaagcgga attaaaccaa attcagcaag tggctgcaga
     6601 agcagctcaa actaaatcgt tgtcagataa aattgctgcc actattcact gccgtggtga
     6661 aaaactctct attgcgatga tgcaagcgtg gttcgaggca aaaggctatg aagtcactcg
     6721 tatcgaccct gttgaaaaat tattggctca cggcagctat ttggaatctt cggtcgatat
     6781 tgccgaatcc accaagcgag ttgatgcagg ttcaattcca aagaaaaata tcgtgctaat
     6841 ggctggtttt accgcaggta atgagcaagg cgaactggtg ttattagggc gtaacggttc
     6901 agattattct gccgcttgtt tggcagcgtg tttaaaagcc gatgtttgtg aaatctggac
     6961 ggacgtagat ggcgtttaca cctgcgaccc tcgtttggtg cctgatgcag tatgcttaga
     7021 aacaatgagc tatcaagagg caatggagct ttcctacttt ggggcgaaag tgatccaccc
     7081 tcgcaccatc gggccattag tgccgctcaa tattccttgt ttaatcaaaa ataccggcaa
     7141 tccggacgga aaaggcacat taattgatgg caatgtggca aacgataatc tcaaagtaaa
     7201 agggattacc aaccttgata acgtggcgat gttcaacgtt tcaggttcag gaatgcaggg
     7261 aatggtgggc atggctgccc gtgtgttctc gacgatgtca aaagccggta tttcggtgat
     7321 tttaattacc caatcatcat cagaatatag catcagcttc tgcgtgccgg caaaatcggc
     7381 agaaaaagcg ttagcggctc taaatactga atttgcacaa gagttatctg aaaacttact
     7441 tgacccgatt gatattatta aagatttatc cattgtttcg gtagtgggtg atggtatgcg
     7501 taccgccaaa ggaattgcgg ctcgcttctt ctctgcccta gcccaagcca acatcagtat
     7561 tgtggcaatt gcacagggtt catctgagcg ttccatttct gctgtcgtgc cgttaaacaa
     7621 agcgattgaa gcagtaaaag caactcacaa atcgctattt aacagtaaac gtgtggtgga
     7681 tatgttttta gtgggtgtag gcggtgtggg tagcgaactc atcgagcaag tcaaacaaca
     7741 aaaggagttt ttggcaaaga aggatattga gatccgtgtg tgtgctttag ctaattcaga
     7801 taaaatgtta ctcaacgaaa acggcttaaa tttagacaac tggaaagaag atttagaaaa
     7861 agcaattcag ccgtcagact ttgatgtatt gctttctttc atcaaattcc accacgtggt
     7921 aaacccagta tttgtagatt gcacttcggc acaatcggtg gcgaacctgt acgcacgagc
     7981 cttaaaagag ggcttccacg tggtaacacc aaacaaaaaa gccaatacat caggttacga
     8041 ttactactta gaaatgcgtg aaaacgcccg ccaaagccag cacaaattcc tctacgaaac
     8101 taatgtaggg gcaggtttac cggtaattga aaacttacaa aacctattag ctgccggtga
     8161 cgaagtagag aaatttgaag ggattttatc cggctcgctc tctttcattt tcggcaaatt
     8221 agaagaaggt ttaacccttt cgcaagcaac tttaatcgcc aaagaaaaag gctttaccga
     8281 gccagatcca cgagatgatt tatccggtgc agatgttgct cgtaaactct taattcttgt
     8341 tcgtgaaacc ggcttaccgc ttgaatttga agatattaaa attgaaggcg tattgccaaa
     8401 aggcttctcg gaaggaatga gtcgtgatga gtttttacaa gctctaccgt ctttagacga
     8461 agaattcagc aagcgtgtag aagctgccaa ggctgaaggc aaagtgttgc gttatgtggg
     8521 ctcgatcaca ggtgataaat gccgagttgc cattgaagcc gtggacgaaa accacccact
     8581 ttacaaagtt aaagacggcg aaaatgccct tgcttttctc acacgttact acaaccctat
     8641 tccattatta ttgcgtgggt atggtgcggg caatagcgta accgctgccg gtatctttgc
     8701 agatattctg cgtactttac aaggaggagt gaactaatgg cgttacgaat ttatgcccca
     8761 gcttcaagtg caaatattag tgtgggtttt gactcattag gcgctgcaat ctccccgatt
     8821 gacggctctt tgctcggcga tgtagttcaa attgaagaga gtgaacaaca atttgagcta
     8881 gaaagtgcag gttattttgt acgtaaattg cccaaagaac cacaaaaaaa cattgtctat
     8941 caagcctatg tgctatttag cgaacgcttg aaattacgta acggcagtgt aaaaaattta
     9001 cgcttaacac ttgaaaaaaa tatgccgatt ggctcagggc taggctcaag tgcctgctcg
     9061 attgttgcag cattagtggc actcaataaa ttccacgatg aaccgttctc caaaatggaa
     9121 ttactggaaa tgatgggcga attggaaggc agaatttcag gctcaatcca ctacgacaac
     9181 gttgcccctt gctatttagg tggcctgcaa ttaatgacac aatcgctcgg caatatttgc
     9241 caacctctgc cattctttga tgaatggtat tgggtgcttg cctacccggg cgtggaagta
     9301 tcaaccgccg aagcccgtgc tattttgccg aaaagctata ctcgtcaaga tatgattcag
     9361 caagcccgct acttaggatc tttcgtccat gcttgccata cacatcaaga tatcttggct
     9421 gctacaatga tgaaagacct aattgctgag ccttaccgtg aagatttact gccgaacttt
     9481 ccggctgttc gtcaaggctg taaagactta ggtgcgttag cggttggtat ttcaggttcc
     9541 ggtccgacaa tgtttgcgat agcccctgat ctcgaacacg ctcaacgttt agtgagctat
     9601 ttagagaaag aatatctgca aaacaacgaa ggctttattc atatctgtaa agtcgataat
     9661 caaggagcaa gagagctgaa atagccctct cgaacaacca tatcactaaa taacttaaag
     9721 gactgactcc aataccactt ggagcagccc tttttgatta attttttgaa aagtctatca
     9781 cttataaaca atcgaaggct atgccttacg ccaaattgtg ccgtttgggg tgtcttcgag
     9841 gacaatattt atcgctttga gcttatctcg cacttcatcg gcaaccgccc agtttttagc
     9901 cgctttggct tcgttgcgtt gtttgattaa ggcttcgatt tctgccgttt catcgtcatt
     9961 cgcatcacct tttaaaaacg catcggggtc ttgttccagt aagcctagca cgccggctaa
    10021 ctcttttaaa cgaacggcta aaccgttggc ttttgccata tcttcggttt tgagtttgtt
    10081 caactcacgg gcaatttcaa ataacaccgc taatgccccc ggggtgttga aatcatcgtc
    10141 cattgcggtt ttaaaggctt ctacatagtg ttctccgatg gcttcgcccg acacatcaca
    10201 accacgcaga gcggtatata aacgctcaag agccgaacgg gctaaatcaa ggttgtcaat
    10261 gctgtaatct aataacgaac ggtaatgagc ggttaagaag aaataacgta acgattcggc
    10321 atcgtataag cctaacatat ggcgaatgct gaagaaattg cccaaagatt tcgacatttt
    10381 ttctttatca atggtaagca ttccagtgtg taaccaataa ttgacataat cgccaccgtg
    10441 agcacagcaa gattgtgcaa tttcgttttc gtgatgcggg aacattaaat ccgagccacc
    10501 gccgtgaata tcaaaatgtt cgcccaactc tttgctattc attgccgaac attcaatatg
    10561 ccagcccggt ctgccattgc cccacgggct ttcccagctt ggctcaccgg ctttcgacat
    10621 tttccacaag acaaaatcca tcgggttttt cttgatggat ttaatttcaa cccttgcacc
    10681 ggcttgtagt tgctctaaat tttggcggga taatgcacca tatttctgga acgattccac
    10741 atcaaacatc acatcgccat cggctgcgac ataagcgtgt ccgttgtgaa tcagtttttc
    10801 taccatcgca ataatttcag gaatatgctt ggtggctcgt ggctcaacgt ccgggcgaag
    10861 aatgtttaac gcatcaaaat ctttgtgcat ttcagcaatc attctatcca ctaattcatc
    10921 gcaagtttcg ttattttcta acgcacgttt gatgattttg tcgtccacat cggtaatgtt
    10981 acgcacatag cgtaaattgt agcctgaata acgtaaataa cgggcaatca catcgaaaga
    11041 gacaaaagtg cgaccgtgcc caaaatgaca aagatcgtaa accgtgacgc cacagacgta
    11101 cattcccacc tgatttgggt taatcggttt aaattcttct ttttcacgtt ttaaggtgtt
    11161 ataaattttg agcataaagt cctcttgtgt aacattcagt aacaaatggg gctaagtata
    11221 gcgaataagc ggtctgattt tgagattttt ttgcaatttg gcgtaaactt tttaataata
    11281 gcgagcgaaa tttattttcc attccatttt tatttataaa ggaacaaaga atgattacat
    11341 tacataccaa tttcggtgac attaaaatcg aattaaactt tgaaaaagcc ccgattaccg
    11401 ctaaaaactt tgaagattac gctaaagaag ggttttataa cggcacgatt ttccaccgtg
    11461 tgattgacgg ctttatgatt caaggtggcg gaatgacggc aggtatggct gaaaaaccga
    11521 caaaagatcc gattcaaaac gaagcgaaca acggtttaag caacaagcgt ggcacaatcg
    11581 caatggctcg cacttctgat ccgcattctg cttcgtcaca gtttttcatt aatgtggcgg
    11641 ataatacttt cttagattat cgctcaaaag agatgttcgg cagaagtgta gtgcaagatt
    11701 ggggctatgc agtatttggc gaagtggttg aaggtatgga cgtggtcgat aaaatcaaag
    11761 gcgtaaaaac cggcaataaa ggcttccacc aagacgtgcc ggttgaagat gtggtgattg
    11821 agtctgtaag cgttgcctaa ttccgcaaat tagcctacaa gcggttgatt tttcacaatt
    11881 ttttgcattt ctcagcgttg caaaaaagta gcagaaatcg actgcttgtt tttatagaaa
    11941 ttgatacagc caaataatca gcggcattgt aaacacacaa agtaaagtgg ttacgccata
    12001 aatcgcactg gcttttttgg catcttgccc gtaagccacc gccatttggg tcgccgttgc
    12061 agcagaaggg ctgatggtgg ctaagaatgt aatcattacc accgtttttc cattctctat
    12121 ccagctcgca aaaccgccga gtttaatcac cgctaacaaa atcagcggaa taaaaatcaa
    12181 gcggagaaaa gccaccaagt aaatgcgttt atcggtaata atctctttaa atggaattgc
    12241 tgcaattaac atccctgcca caagcattgc taaaggccct aacatatgcc ctaaagttga
    12301 gagcgtgttt gcaagcgtag cgggcagttt gatatgtagc aaaaacaaca tcataccaat
    12361 cacaatcgca ataatgttga tattaaagat catctttcta aacggcacat tgcctttgcc
    12421 acaaatcagc agccgtaagt gagaccaaaa caacacattt tgcaccacaa taaaagccgt
    12481 tgaataaatc acccattcat tgccgaacag ggaggcaaca atcggaataa ttaagttgcc
    12541 ggagttggaa taaatagcgg tggcttgttc tatgttgtct aatttcaacg ctcttttgag
    12601 cagccaacca agcagaatta acaagccgtt taataagacg gagattaaaa atgccagata
    12661 caagccgttt agtatttcgg tggtgtaatc tacttgaaaa gcagtaatca gcattgccgg
    12721 gctgataatg taaagtccga taaccgaaat cggataactg tgctccgatt tgagtaattt
    12781 agttttaacg atgaggtagc cgagcagcac catcagggtt aattgtagaa ttttatcggc
    12841 taataaaagg gctatttcca ttatcaatta agagcgagtc tctcttctcc tgcataaatg
    12901 gtcgctttgc ctttgcgggc aaaagcaagt aaggtaaatt gattttcacg agccatattc
    12961 actgccattt cagtggtcgc tgagatggca cacaacattt caatgccaac ggctaagcat
    13021 ttctgcacca tttcaaagct ggcacgactg gttacaaaca caaatccaat cggaaaatca
    13081 gctttagcat accaaccgat taatttatcc aacgccacgt gtctgcccac atcttcacga
    13141 atggcaagca gttttccatc cggggtaaaa aatgcagcgg cgtggcttgc accggtttct
    13201 ttcgataaga attgagcatt ttctagctgt aataaacaat cctctaaaat cagtggattg
    13261 acgttctgca agcggttatt tttcttaaca attttgcaac tttgattaac ctgctctaat
    13321 tgctctacac cgcaaatacc gcaacctgtt ctgcctgcca ttgagcggcg tttatctttt
    13381 aatgcaacaa attggcggct cgatatttca agctgaattt ctactccatt ttcttgttca
    13441 attacatcta aaccatataa ttccgatggg gcatttaaaa tcccttccgc caatgagaat
    13501 cctaaagcga agtcctccaa attagccggt gttgccatca ttacagtatg agaaataccg
    13561 ttatatacca aagcaaccgg cacttc
//
LOCUS       DANLXD010000075        13539 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.075, whole genome shotgun sequence.
ACCESSION   DANLXD010000075 DANLXD010000000
VERSION     DANLXD010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13539
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.075"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..421)
                     /locus_tag="PXD18_001791"
     CDS             complement(<1..421)
                     /locus_tag="PXD18_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014668079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMP-N-acetylneuraminate-beta-galactosamide-
                     alpha-2, 3-sialyltransferase"
                     /protein_id="HDL6302200.1"
                     /translation="MNLIICCTPLQVLIAEKIIEMHPNERFYGVMLSTVKNAKFDFYQ
                     ARLAQKCEQFFAMQQHSERIQLLKEIIYLKRTFGGKKFNKVFLANINELEIQFLLSAI
                     SFQELNTFDDGTANIVQNSIFYQAENIGLNRKLINFFL"
     gene            complement(418..1623)
                     /locus_tag="PXD18_001792"
     CDS             complement(418..1623)
                     /locus_tag="PXD18_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase"
                     /protein_id="HDL6302201.1"
                     /translation="MKAVKDSVIYLIGELASKSIPFLLLPYFSRKLGVAGYGELSYYQ
                     TFAALFVIFIGLSQDGAVARYFYFYGKRSLNLVLSTGYLYTLCATLLILLGCWYFQSE
                     IIAYVAIGAMFQSFLNVQLSVRQCQKQALAYTTIQLMSAIFSAVITVAMMEYFKTDLV
                     EKRILAILMSNGLVFLIAYFLYAKRAKTKKFSLARHKTALLYLFGFGIPLILHHSSIF
                     LKGQLDRVFIYHKFSEEDLGLYAMGAQIAMILAIVVQALNKATLPYFYEALKQKKINV
                     SHIHKWALYALFIVPLPAIVMWFIPEELVVWILGSQFVGTKYYIILFLIATMLVVPYL
                     ILVNYLFFYGKNKLISLCSILSTIFYLVALFALTFSKIEYIPFASIIGAISIIPILYI
                     MTAKVGKTV"
     gene            complement(1633..2817)
                     /gene="neuC"
                     /locus_tag="PXD18_001793"
     CDS             complement(1633..2817)
                     /gene="neuC"
                     /locus_tag="PXD18_001793"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HDL6302202.1"
                     /translation="MKNIAYITGSRAEYGIVKRLLQKLAQDPTVNFSLVVTAMHLDPQ
                     YGNTVTVIEQDGFEIAARIPLTLNSENNQTIIHSMAECLDRFGEHFQQHRYDAVIVLG
                     DRYEMLAVATAAAMHNIPLIHLHGGEQTLGNYDEFIRHCITKMSKLHLTSTEEYRQRV
                     IQMGELPENVVNTGSLGAENSLDLVLPTQAELVERLGIPASPYFLVVFHPETLTDVSV
                     LEQIEALLNAFEQFKDKYQFVFIGSNSDTNSEQIYARFKAYTDENQFKFFTSVKPEEY
                     LALIKYSNGLIGNSSSGLIEAPSCGVGTLNIGNRQQGRVRDESVIDVESNEQAIIDGI
                     EKLISADFQHRLPSMKNPYFQDNAMEKAYNAIKIFLADSHHTQPKGFYDVAFSQAVKK
                     SE"
     gene            complement(2818..4077)
                     /locus_tag="PXD18_001794"
     CDS             complement(2818..4077)
                     /locus_tag="PXD18_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylneuraminate cytidylyltransferase"
                     /protein_id="HDL6302203.1"
                     /translation="MKKIAIITARAGSKGLPNKNVLLANGKPLMAYSIEAAIESGQFE
                     KIIVSTDSQEYIDLFSHYPIEFIKRAEHLASDKASSFVVIEDVLNQYRSVEFDYFMLL
                     QPTSPLRSGEHIKESCEKFEKNFEQFDFLVSVSDAHKPTTLTRMIEEDECLKHFQLDY
                     SNYARQLHHPEYSPNGAIFTAKPEAYLKQKHFYGAKCLAYFMDKDVSIDIDDRQDFEY
                     FYFILQQRNKEKILLETIKRSILMKKENFKEVKEIALIGHSIIEYWDIEHLNGKAVNN
                     LGIAGISTKQYSDLILDEGLISALPKDIILMFGTNDIVYAGWSDEKILADINHLIAQL
                     TAIRGDINLYFLEITPTAFRVDRNNNDIRLLNQYLKDNLAVKWISLDQAFSDKYGKLD
                     LSYSDDGLHLNAKGYEKLTAILEKELN"
     gene            complement(4137..5174)
                     /gene="neuB"
                     /locus_tag="PXD18_001795"
     CDS             complement(4137..5174)
                     /gene="neuB"
                     /locus_tag="PXD18_001795"
                     /EC_number="2.5.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate synthase"
                     /protein_id="HDL6302204.1"
                     /translation="MVNVFIVAEIGCNHNGDPALAKKMVDVAKECGVDAVKFQTFKAD
                     KLISKYAPKAEYQKVTTGTADSQLEMTRKLELPYEEFVKLEAYARSLGLEVFSTPFDF
                     ESIDFLASQQQKVWKIPSGELTNLPYLEKIARLPIEGKTIVISTGMATIEETKASLKV
                     LEDNGVAKKDITILHCNTEYPTPYEDVNLNAFHQLKQEFGDYSLGFSDHSAGYFAGLA
                     AVPYGITFIEKHFTLDKNFEGPDHKASVTPEELKLLCEGIRAVEKSLGSSEKLVTNSE
                     AKNKIVARKSIIAARPIKKGEIFTTENITTKRPGNGISPMFWYDVLGKEAQQDFEEDQ
                     LIQDSRFENQM"
     gene            complement(5174..5818)
                     /locus_tag="PXD18_001796"
     CDS             complement(5174..5818)
                     /locus_tag="PXD18_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HDL6302205.1"
                     /translation="MQQKSKREKLILIGAGGYAKSVLDSLDHEQYEFCGLIDNFKPEG
                     SVHLGYPILASTIDCFSKRDNYHYFICIGNNSYRLEKFSKLQKYKCRIINVVDKTALV
                     SKNSTLGIGVFVGKMAIVNSGVTVGDNVIINTKSLVEHGCFIGSHCNISTNTTLNGDV
                     IVEDHAFIGSSSVVNGQLRVGESALVGSGAVVIRNVEPRTVVAGVPAKYIKDIK"
     gene            5951..6694
                     /locus_tag="PXD18_001797"
     CDS             5951..6694
                     /locus_tag="PXD18_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDL6302206.1"
                     /translation="MFEFIKLITAMILPPFNIILLWLLALILFSLGYKYAAYFFALLG
                     ILILYIFSIPYTSQKLGDSLVEAEPFTIEKYKNAQAIVVLGGGLRDSQELFGKLAITG
                     IPLERMRYAAYLHKETGLPILATGSSPNGTSEAKVMADEFKMFFNIETKWLENKAKTT
                     KENAIFSREILEKENIHKIILVTNQWHMKRAEMLFSQQGFEVMSASVGSGDTPDHYKL
                     NFMHFIPQAGAMNSNMLALKEWIGYWKEK"
     gene            complement(6771..8969)
                     /gene="priA"
                     /locus_tag="PXD18_001798"
     CDS             complement(6771..8969)
                     /gene="priA"
                     /locus_tag="PXD18_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HDL6302207.1"
                     /translation="MALNVPLHRYFDYLLPPAFNACQGGRVVVPFGRQTKIGIVVDFP
                     QTSDVPTEKLKPIKAALDSSPIFDSEMWQLLNWAARYYHAPIGEVLTGALPIKLRNGD
                     STERVQPNYFVVTEQGRKSLIIGENKKAKKQVERLTELAECAKYFEKPTACSPSAWKG
                     LLEKGYIEKIDVPFMAQAWQDSLGEFPLVNTNNRLILNKQQTLVVSRLNAQTTFASFL
                     LNGVTGSGKTEVYLQLIETVLKREEQVLLLVPEIGLTPQTVQRFKARFNVEIDVLHSN
                     MNETERLNAWLRAKNGESAIVIGTRSALFTQFQKLGVIILDEEHDSSFKQQDGWRYHA
                     RDLAVVRAKNANIPIVLGSATPSLESLHNVQNGKFIELTLTARAGNAQLANQQIIDLK
                     TQRVTAGLSERLLSMMKTQLEQGNQVMLFLNRRGFAPVLLCHECGWVCECEACNKPFT
                     YHQKQKVLRCHHCATQRVIPRQCGHCGSTHLITTGVGTEQLEQVLNQQFPHYQVTRID
                     RDSTARKGALENHLTAIREGKSQILIGTQMLAKGHHFPNVTLVAIVNVDSALFSTDFR
                     AEEKLAQLYIQVAGRAGRAEKKGEVVLQTHYPDHPLLKTLLEQGYRAFADEALKMRQL
                     MSLPPFSSQVLFKATGKDNQQTLQLLEQLADYFSQKIQQQNGQGFQLPPPFSAPMAKK
                     AGHYRWLLLIQHPLRGALQQLLDAFDQERESLNIPNNIRLNIDIDPQEIS"
     gene            complement(8981..9593)
                     /locus_tag="PXD18_001799"
                     /pseudo
     CDS             complement(8981..9593)
                     /locus_tag="PXD18_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818858.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
     gene            complement(9586..10485)
                     /gene="rarD"
                     /locus_tag="PXD18_001800"
     CDS             complement(9586..10485)
                     /gene="rarD"
                     /locus_tag="PXD18_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDL6302208.1"
                     /translation="MLKGILLSLSASVLFGCMYYLAIFLKPLAGVSIFGIRMLVTIPF
                     LFLALYLFKKQNEFWVFLQRLKQEPYLLLVILITASIVGGQMWLFLWAPNSGKAIEVS
                     MGYLLMPIIMVAFGKVVYKETLSLNKWLAIVVAFIGVASNILFTGKISIASLFVCTGY
                     PIYFYLRRKFGLSHLHSFVVEILYLLPVACYFISQTDMQYVETQNLNIYYFIALLGLI
                     SGTALISYTLASTILPFNLLGLLGYVEPLLMLVVSFLIGERLANESYLLMICLLISIS
                     FLVLDGMFALRQQRKRKLSVNNE"
     gene            complement(10712..11929)
                     /locus_tag="PXD18_001801"
     CDS             complement(10712..11929)
                     /locus_tag="PXD18_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HDL6302209.1"
                     /translation="MDRFPKSDKLAQVRYDIRGPIHKEALRLEEEGHKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIVQYYQSKGMRGMDVNDVYIGN
                     GVSELITMSMQALLNDGDEILIPMPDYPLWTAASTLAGGKAVHYLCDEENEWFPDLED
                     IKSKITPRTKGILVINPNNPTGAVYSRQILLEIAELARQHNLIIFADEIYEKIVYDGA
                     VHHHIAALAPDVLTVTYNGLSKAYRVAGFRQGWMVLSGPKHQAKGFIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFVLPGGRLLEQRNKMHELLVQIPGISCVKAKGALYM
                     FPKIDTEMYGIKDDQKFIYDLLRQEKVLLVQGSGFNWKKPDHFRVVTLPYAHQIEEAI
                     GRLANFLKTYRQD"
     gene            12117..13421
                     /locus_tag="PXD18_001802"
     CDS             12117..13421
                     /locus_tag="PXD18_001802"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase"
                     /protein_id="HDL6302210.1"
                     /translation="MLIFHQLKQELTKSYSKVGREQGLVAIQASMPLLEANIPLLGWL
                     KTQKTSYPHFFLQYRDTDQTIATIGTLRQFYTLEAAQSFIQQHHFPLIGGLQFEGNTQ
                     FILPQFSLVKNQQNLTACFYFDSDNFEQQAVIFEQFLANFSQITELGLTDNPLVSMSA
                     TSHFEQWKANIEKAIVSIEQGDFQKVVLANAMRLHFEQPICAYSLLAQSQKTNLGCYH
                     FLWAESADVAFLGSTPERLYQRQGLHFSTEALAGTAAVTTSEVQTELNAQWLLSDPKN
                     IYENQLVVDDIENQLKDCVTEFAVSEAKIKRLHNVQHLRRQIQATLKPDTSDSDCLSK
                     IHPTAAVAGLPRQKAKGFITENEPFTRHWYAGTLGVMGNEEAEFCVTLRSALISQNSI
                     TLYAGAGIVSGSDPQSEWQEIKRKAQGMAKLLDVDLVTKGEL"
BASE COUNT         4194 a         2877 c         2456 g         4012 t
ORIGIN      
        1 ctaaaaaaaa gttaatcaat tttcgattta acccaatatt ttcagcttga tagaaaatac
       61 tgttttgtac aatattagct gtgccatcat caaaggtatt gagttcttga aatgaaatgg
      121 cacttaacag aaattgaatt tctaactcat tgatatttgc taaaaagact ttattaaact
      181 tcttaccgcc aaaagtacgt tttaaataaa taatttcttt taataattga atacgctcgc
      241 tatgttgttg catcgcaaaa aattgttcgc acttttgggc taatctagct tggtaaaaat
      301 caaatttcgc gttttttacc gtagaaagca tcaccccata gaatcgctca ttagggtgca
      361 tttcaatgat tttttcagca atcaacactt gcaagggcgt gcaacaaata attaaattca
      421 tacggttttt cctacttttg ccgtcattat ataaagaatc ggaataatgc tgattgcacc
      481 aatgatgctg gcaaaaggaa tatattcaat tttagaaaaa gttaaagcaa atagtgcaac
      541 taaataaaaa atagtagata aaatcgagca aagcgaaatt agcttatttt tgccataaaa
      601 aaacaaataa ttgactaaaa tgaggtaagg cacaaccaac attgtcgcaa ttaaaaagag
      661 aataatgtag tattttgttc ctacaaattg gctacccaga atccatacca ctaattcttc
      721 cggaataaac cacatcacaa tagcaggtaa tggtacaata aataaggcat acaacgccca
      781 tttgtggata tggctgacat taattttttt ctgctttaag gcttcataaa aataaggcag
      841 tgttgcttta tttaaggctt gaaccacaat ggctagaatc atcgcaattt gagcccccat
      901 tgcatataaa cctaaatcct cttcgctaaa tttatggtaa ataaatactc tgtctaactg
      961 tccttttaag aaaatactgg aatggtgcaa aatcaacgga ataccaaagc cgaataaata
     1021 caataaagca gttttatggc gggcaaggct aaatttcttc gtttttgctc ttttagcata
     1081 caaaaagtaa gcgattagaa agactaagcc attactcatc aaaatcgcta aaatccgctt
     1141 ttccactaaa tcggtcttaa aatactccat cattgcaacg gtaataactg ccgaaaaaat
     1201 cgccgacatt aattgaatcg ttgtataagc aagtgcctgt ttttgacact gccttacact
     1261 aagctgtaca ttcaaaaacg actggaacat cgccccaatc gctacataag caataatttc
     1321 agactggaaa taccagcaac ccaacaggat aagcaaagtt gcacaaagag tatataaata
     1381 ccctgtactc aagactaaat ttagtgaacg cttaccataa aaatagaaat agcgagcaac
     1441 cgcaccgtct tggctaagcc cgataaaaat tacaaataaa gcagcaaagg tttggtagta
     1501 ggaaagctcc ccataacctg ccacgccgag tttgcgtgaa aagtagggta agagcaagaa
     1561 aggaattgac tttgacgcca attccccaat taaataaatc acactgtctt taactgcttt
     1621 catagttgca aattattctg attttttgac cgcttgcgag aaagcaacat cataaaatcc
     1681 tttcggttga gtatggtggc tgtctgctaa gaatattttg attgcattgt aagccttttc
     1741 catcgcgttg tcttgaaaat atggattttt catactcggt aaacggtgtt ggaaatcggc
     1801 tgaaatcaat ttttcgatac catctatgat agcctgttca ttactctcta catcaattac
     1861 gctctcatcc cgtactcgcc cttgctggcg attaccgata tttagcgtac caacaccaca
     1921 actcggtgct tcaatcaagc ctgatgagct attaccaatc aacccatttg aatatttaat
     1981 caacgctaaa tactcttccg gtttgactga ggtgaaaaac ttaaattgat tttcatcggt
     2041 gtaagcctta aaacgtgcat aaatttgctc tgaattggtg tctgaatttg agccgataaa
     2101 gacgaattgg tatttgtctt taaactgctc aaaagcattg agtaacgcct caatttgctc
     2161 caacacggaa acatcggtta aggtttccgg gtggaagacc actaaaaaat aaggcgatgc
     2221 cggaatccct aatctctcga ctaattctgc ttgggtcggc aacactaaat ccaaactatt
     2281 ctccgcccct agagaaccag tattcaccac attttcgggc agctcgccca tttgaatcac
     2341 acgctgtcta tattcttcag ttgaagttaa atgcaatttc gacattttgg taatacaatg
     2401 gcgaataaat tcatcgtaat tacctaatgt ttgctcacca ccgtgcagat gaatcagcgg
     2461 aatattatgc atcgccgcag ccgttgccac cgccaacatc tcgtaacgat cgcctagcac
     2521 aatcaccgca tcataacgat gttgctggaa atgttcgcca aatcgatcta aacactctgc
     2581 cattgaatga ataatggtct gattattttc actgtttaag gtaagcggaa tacgagctgc
     2641 aatctcaaag ccatcttgct caatgaccgt caccgtattg ccatattgcg gatccaaatg
     2701 catcgcagta acaaccagag agaaattcac agtcggatct tgtgctaatt tttgtaataa
     2761 acgctttaca atcccgtatt cggcacgaga tccggtaata taggcaatat ttttcattta
     2821 gttgagctct ttttccaaaa tagcggttaa tttttcataa ccttttgcat ttaaatgtaa
     2881 tccgtcatcg ctatagctta aatccaattt gccatattta tcgctaaatg cctgatctaa
     2941 gctaatccat ttcaccgcta aattatcttt aagatattga tttaacaagc gaatatcgtt
     3001 gttattacga tcgactctaa atgcagttgg ggtaatttcc aagaaataga gattaatatc
     3061 tccacgaatt gctgttaatt gtgcaattaa atgattaata tctgctagaa ttttttcatc
     3121 actccagcca gcatatacaa tatcattagt accgaacatt aaaataatgt ctttaggtaa
     3181 agcagaaatt aaaccttcat ccaaaatcag atcactgtat tgttttgttg aaatacctgc
     3241 aattcctaaa ttattaactg ccttaccgtt taaatgttca atatcccaat attcaatgat
     3301 cgaatgcccg attaaggcta tctctttcac ttctttaaag ttctcttttt tcattaaaat
     3361 cgaacgttta atggtttcaa gtaagatttt ttctttattg cgttgttgca gaataaagta
     3421 gaagtactcg aaatcttggc gatcatcaat atcaatagaa acgtctttat ccataaaata
     3481 ggctagacat ttcgcaccat agaagtgttt ttgtttaaga taggcttctg gcttagctgt
     3541 aaaaatagct ccattcggtg aatattcagg atgatgcaat tggcgtgcat agttagaata
     3601 atccaactga aaatgcttta ggcactcgtc ttcctcaatc atacgagtca atgtcgtagg
     3661 tttatgggca tcagaaacag atactaagaa atcaaattgt tcgaaatttt tctcaaattt
     3721 ttcacacgat tccttaatat gctctcctga tctcaacggc gaagttggtt gaagtagcat
     3781 aaaatagtca aactctactg atctatattg atttaacaca tcttcaatca cgacaaaaga
     3841 actcgcctta tcactggcta aatgctcggc acgtttaata aattcaattg gataatgtga
     3901 gaacaaatca atgtattctt gggaatcagt actaacgata attttctcaa attgccccga
     3961 ctcaatcgca gcttcaatag aataggccat taacggctta ccgttggcta ataatacatt
     4021 tttattcggc aagccttttg aaccggctcg ggctgtaata attgcaattt ttttcataaa
     4081 tttgaccgct tgttaaacac aaaatgatgg agctttcatc ccatcactat attatattac
     4141 atctgatttt caaaacgaga atcttgaatt aattgatctt cttcaaaatc ctgttgtgct
     4201 tctttaccta gcacatcata ccaaaacatc gggctaatgc cattaccggg gcgtttagtc
     4261 gtaatatttt cggttgtaaa aatttcgcct tttttaattg gacgtgccgc aataattgat
     4321 tttcttgcca caattttatt ttttgcttcc gaattagtga ctaatttctc ggaagaaccc
     4381 agcgattttt ccaccgcacg aatgccttca cacagtaatt tcagctcttc aggtgtaacc
     4441 gaagctttat gatccggacc ttcaaagttt ttatctaagg taaaatgttt ttcaatgaag
     4501 gtaatgccgt aaggtactgc cgccaaccct gcaaaataac cggcagagtg gtcagaaaaa
     4561 cctaaactat agtcgccaaa ctcctgtttt agctgatgga acgcatttaa attcacatct
     4621 tcataaggtg tcgggtactc ggtattacaa tgtaaaatcg taatatcttt tttcgctaca
     4681 ccgttatctt ccaatacttt taatgaggct tttgtttctt caatggttgc cataccggta
     4741 gaaataacga tcgtcttgcc ttcaatcgga agtcgtgcaa ttttttctaa atacggcaaa
     4801 ttggttaatt caccagacgg aattttccac actttttgtt gttggcttgc caagaaatca
     4861 atcgactcga aatcgaatgg cgtagagaat acctctaacc ccaatgaacg agcgtaagcc
     4921 tctaatttca caaactcctc ataaggtaac tctaatttgc gggtcatttc taattgggaa
     4981 tcagcggtgc cggtcgttac tttttgatac tcggctttag gggcatattt agagatcaac
     5041 ttatccgctt taaaggtttg gaatttcacc gcatcgacac cacactcttt cgctacatca
     5101 accattttct ttgctaacgc aggatcgccg ttatggttac aaccgatttc tgccacaata
     5161 aatacattta ccattatttt atatccttaa tatattttgc tggaacgcct gctacaactg
     5221 tgcgaggctc cacatttcta attaccactg caccggagcc aaccaatgca ctttcaccca
     5281 ctcttagctg tccgttcaca acagaggaac taccaataaa agcatgatct tcgacaatta
     5341 catcgccatt tagtgtcgta ttggttgaaa tattgcaatg actgccgata aaacaaccat
     5401 gctcaaccag cgatttagtg ttaatgatca cattatcgcc tacagttacg ccactgttta
     5461 caattgccat ttttccaaca aacactccaa tgcctagagt ggaatttttg gacaccaatg
     5521 cggttttatc taccacatta attattctac acttatattt ttgtagctta gagaattttt
     5581 ctaaacggta actattattt ccaatacaaa taaaatagtg ataattatct cgtttagaaa
     5641 aacaatcaat tgttgaagct agaataggat aacctaagtg cacactacct tcaggcttaa
     5701 agttatcgat aagtccacaa aattcatatt gttcgtgatc aagtgaatct aacactgatt
     5761 tggcatagcc accggcaccg atcaaaatca atttttctct tttagacttt tgttgcattg
     5821 ctatcaccca tgatgaattt caattcatat ggagtattct aatacttttc aagatagaaa
     5881 aatagacaag tcttatataa tttaggaaaa tgaacatatc tttacttatt tttactacga
     5941 tattctttct atgttcgagt tcattaaact gatcaccgca atgatcctcc cgccatttaa
     6001 tattattttg ctgtggttgt tagcattaat cctcttttct ttaggctata aatacgctgc
     6061 ttacttcttt gccttgttag gtattctgat tttatatatc ttcagcattc cctatacttc
     6121 acagaaatta ggggattcat tagtcgaagc agagccattt accatagaga aatataaaaa
     6181 tgctcaagcg attgtggtgc taggtggcgg gctacgagac agccaagagt tattcggcaa
     6241 actggcaatt accggtattc cgctggaaag aatgcgttat gccgcttatc tgcataaaga
     6301 aaccggctta ccgattttag cgaccggaag cagcccaaat gggacttctg aggcaaaggt
     6361 tatggcagat gaatttaaaa tgttcttcaa tattgagacc aaatggctgg aaaataaggc
     6421 gaaaaccacc aaagaaaatg cgattttcag ccgtgagatt ttagaaaaag agaatattca
     6481 taaaatcatt cttgttacca accaatggca tatgaaacgg gctgaaatgc tgtttagcca
     6541 acaaggattt gaggtgatgt ctgccagcgt cggttctggc gatacgcccg atcattacaa
     6601 actcaacttt atgcacttta ttccgcaagc cggtgcaatg aatagcaata tgctggcatt
     6661 aaaagagtgg attggttatt ggaaagagaa ataaccgaag ataaatagca gcaaggcagg
     6721 ttttcacctg ccttcttttt gcaaaaaatc agtcaaaaac aaccgcttgt ctaactaatc
     6781 tcttgtgggt caatgtcgat attcagcctg atattattcg gaatgtttaa actttccctt
     6841 tcttgatcaa aggcatcgag tagctgttgt aatgctcctc ggagagggtg ttgaatcagc
     6901 aataaccagc ggtaatgtcc tgctttcttc gccattgggg ctgaaaatgg tggagggagc
     6961 tggaagcctt gcccgttttg ttgctggatt ttttggctaa aataatctgc taattgctca
     7021 agcagctgta aggtttgttg attatctttg ccggtcgctt tgaacaaaac ttgcgaggaa
     7081 aatggtggca aactcattaa ttgcctcatt tttaacgcct catcagcaaa agctcggtag
     7141 ccttgttcca gcaaggtttt aagcagtggg tgatcagggt aatgggtttg tagcaccact
     7201 tcgccttttt tctccgctcg ccctgctctg cctgccacct gtatgtaaag ctgtgctaat
     7261 ttttcttccg cacgaaaatc agttgaaaat aacgctgaat ccacattaac aatcgccacc
     7321 aacgtcacat tcgggaaatg atgccctttt gccaacattt gcgtaccaat caaaatttgg
     7381 cttttgccct ctcgaatagc ggtcaaatgg ttttccaatg cacctttgcg agcggtagaa
     7441 tctctgtcta tacgagtcac ttggtaatga gggaattgct gatttagcac ctgctcaagt
     7501 tgttctgtgc cgacaccggt agttattaaa tgggttgaac cacaatgtcc gcattggcgg
     7561 ggaattaccc tttgggtggc acaatgatgg caacgcaaca ctttttgctt ttggtggtaa
     7621 gtaaaaggct tattacacgc ctcgcactca caaacccaac cgcattcgtg acaaagtaat
     7681 accggggcaa agccacggcg atttaaaaac agcatcactt gattgccttg ctctaactgg
     7741 gttttcatca ttgaaagcaa gcgctccgac aaaccggcag ttacccgttg cgtttttaaa
     7801 tcaataatct gctgattggc aagttgtgca ttgccggccc gagcggttag tgtcagttcg
     7861 ataaatttcc cgttttgcac attgtgcaaa ctttcaagac ttggcgttgc cgagcccagc
     7921 acaatcggaa tatttgcatt tttcgcccta accaccgcca aatcccgtgc gtggtaacgc
     7981 caaccgtctt gttgcttaaa cgagctatcg tgttcttcat ccaagataat cacgcccaat
     8041 ttttgaaact gggtaaataa agcagagcga gtgccgatta caatcgcact ttctccattt
     8101 ttcgcccgca accacgcatt taaccgctca gtttcgttca tattcgagtg caatacgtca
     8161 atttcaacgt taaagcgagc tttaaagcgt tgtaccgttt gcggtgttag cccgatttca
     8221 ggcacaagca gcagcacttg ttcctctcgc ttaagcaccg tttcaattaa ctgcaaatac
     8281 acttcggttt tgcccgagcc tgttacgcca ttgagtaaaa agctcgcaaa agtggtttgt
     8341 gcatttaaac ggctgaccac taaggtttgt tgtttattta agatcagccg attgttagta
     8401 tttactaacg gaaattcacc tagtgagtct tgccacgctt gtgccataaa cggcacatca
     8461 attttctcga tatacccttt ttcgagtaag cctttccaag cagatgggct acaagcggtc
     8521 ggtttttcaa aatattttgc acattcggca agctcggtta accgttccac ctgctttttg
     8581 gcttttttat tttcaccgat aatcagagat ttccgccctt gctccgtcac cacaaaataa
     8641 ttcggttgaa ctcgctcagt ggaatcgcca ttgcgtaatt ttatcggtaa ggctccggtt
     8701 agcacttcac caatcggggc gtggtaataa cgagccgccc agttcagcag ttgccacatt
     8761 tctgagtcaa aaatcgggct agaatccaac gctgctttaa tcggtttgag tttttcggtt
     8821 ggcacatcac tagtttgcgg gaaatcgacc acaatgccga ttttggtctg gcgaccaaaa
     8881 ggcacaacca cccgcccgcc ttggcaggca ttgaatgccg gcggtagcaa ataatcaaaa
     8941 taacgatgta acggcacatt cagtgccact ctgattaatc tcacttctct aaaccaattt
     9001 tgattgcaag cccgataaat atcgagccgc agattttatt taaccaattt ccaaaggttt
     9061 gattatgccg taaaaaacgc ccaacaggtg cagcggctaa gactaaaata cttacccaaa
     9121 taatgctggt ggataaaaac gttagcccca acagcataaa aggtattttc caaattactg
     9181 gatacaaact gcggcaataa cgccaagaaa aagagcaata ctttcgggtt taatagattg
     9241 gtaatcaacc cttgacggaa tatcttccat agaggaagtt tgtctagatt gattttctct
     9301 aacaccaacg gctctcgcca cattttaatg ccgagatagc agagataaat tgcccctgcg
     9361 tatttcagaa aattaaataa agtgggcgaa tgtgccacaa tgcctgcaag cccgagtgaa
     9421 accgcaagaa tatggcataa aatgcctgct agaatgccga atgaagacat taagcccgac
     9481 tttttcccct cagcaatagt gcgagttaaa atatagatag tatccgaacc cggtgtaaga
     9541 tttagcagaa tacaagcggt caaaaatccc caataattta caatatcact cattattcac
     9601 actcaattta cgtttacgct gctgacgaag agcaaacata ccatctaata ctaaaaatga
     9661 aatggagatc aacaagcaaa tcatcaacaa gtaagattca tttgctaacc tttcgccaat
     9721 taagaaagac accaccaaca tcaatagtgg ctcaacatag cctaataaac caagcaaatt
     9781 aaagggtaaa atcgtgctgg ctagcgtata gctgataagt gcagtgccac taattaaacc
     9841 cagtaatgca ataaaatagt aaatattgag gttttgtgtt tcgacatatt gcatatcggt
     9901 ttgagagata aaataacaag ctacagggag caaatataaa atttctacca caaagctatg
     9961 taaatggctt aagccaaact ttcggcgaag gtaaaaatag attgggtaac ctgtgcaaac
    10021 aaataaactt gctatcgaaa tttttcccgt aaacaaaata ttactcgcta caccaatgaa
    10081 agcaaccaca atcgccaacc atttattcaa ggaaagcgtt tctttataaa ccactttgcc
    10141 aaatgccacc ataataatcg gcattaatag atagcccatt gaaacctcaa tcgcttttcc
    10201 gctattggga gcccataaaa acagccacat ctgcccgccc acaatagatg ccgtgattaa
    10261 aataaccagc aataaataag gctcttgctt taggcgttga agaaataccc aaaactcatt
    10321 ttgtttttta aataagtata aagcaaggaa aagaaaagga atcgtaacca gcatacgaat
    10381 gccgaaaatg ctcacacctg ccagcggttt tagaaagatc gccaaatagt acatacagcc
    10441 gaataacact gaggctgaaa gagataaaag aatgcctttt aacatagtga taagaaagta
    10501 attatttttt aatttttcaa atctccccta cccctctttt ctaaagagga ttgtcgagtt
    10561 ctaaataaat gaataatgtt cggaggtagg ggcgggtcca gtgcccgccc gcaaattaat
    10621 atcgttagcg gacaggcaca ggacctgtcc ctactgatat tatagaactt acaaccctgc
    10681 ttttataaag tggggtaaag ggagattcga cttagtcttg acgataggtt ttcaagaaat
    10741 tcgcaaggcg accaatcgct tcttcaattt gatgtgcata aggcaaagtt accacacgga
    10801 agtgatccgg ttttttccag ttaaaaccgg aaccttgcac taatagcact ttttcttgtc
    10861 gcaacaaatc gtagatgaat ttttggtcat ctttaatgcc gtacatttcg gtatcaattt
    10921 tcgggaacat atataacgcc cctttcgctt ttacacagct aatacccgga atttgtacca
    10981 ataattcgtg cattttattt cgttgttcca gcaaacgacc gcccggcaac acaaattcat
    11041 tgatactttg ataaccacct aatgcggttt gaatggcgtg ttgcatcggc gtattggcac
    11101 ataaacgcat agaagagagc atatccaacc cttcaataaa acctttggct tgatgcttcg
    11161 gaccgctcag caccatccag ccctgacgga aaccggcaac acgatacgcc ttggataaac
    11221 cgttataagt tacggttaat acgtccggtg caagagcagc aatatggtga tgtaccgcac
    11281 catcatagac aattttttca taaatttcgt cagcaaaaat aattaagtta tgctgacggg
    11341 caagttctgc aatttccagc aaaatttgac ggctatacac tgctccggtc gggttattcg
    11401 ggttgataac caaaatccct ttagtgcgag gcgtgatttt cgatttaata tcttcaagat
    11461 cagggaacca ctcattttct tcatcgcaca ggtaatgcac tgctttacca ccggctaggg
    11521 ttgaagctgc tgtccataac ggataatcag gcattggaat tagaatttca tcgccatcat
    11581 ttaataacgc ctgcatcgac attgtaatca gttcagatac gccgttgccg atgtaaacat
    11641 cgtttacatc cataccacgc ataccttttg attgataata ttgcacaatc gctttgcggg
    11701 cagaatacaa accttttgaa tcacaatagc cttgtgcggt tggaagatta cgaatcacat
    11761 ccactaaaat ttcatcgggt gcttcaaagc caaaaggggc tgggttaccg atatttaatt
    11821 ttaaaatttt atgcccttct tcttctaagc gaagtgcctc tttatgaatt ggcccacgga
    11881 tatcgtaacg aacctgagct aacttatctg atttgggaaa acgatccatt gtaaacttcc
    11941 tataatgtat tatctaattg tagtctcatc ccgctgttca aaaaatcggt aattcggaat
    12001 gaatttgtaa acattactct aatttgggag gaaaaaaaag aggaaatacg ttaaaatgga
    12061 gacctttttt tcaatcagct aaaaacaagc ggtttctttt tctgattttt ttgcaaatgc
    12121 ttatttttca tcaattaaaa caagaactta caaaaagtta ctcaaaagtg ggaagagagc
    12181 aaggattggt cgccattcaa gcctctatgc cgctattgga ggcaaatatt ccgctactcg
    12241 gttggttgaa aacacaaaaa acaagctacc ctcacttttt tctgcaatat cgtgatacag
    12301 atcagaccat tgccaccatt ggcacacttc gccaatttta tacgctagaa gctgcacaat
    12361 cttttattca acaacatcat ttcccgttaa tcggcgggct tcaatttgaa ggcaatacgc
    12421 aatttatttt gcctcaattt tcattggtaa aaaatcagca aaatttaacc gcttgcttct
    12481 attttgatag tgataacttt gaacaacaag cggttatttt tgaacaattt cttgcaaatt
    12541 tcagccaaat taccgaatta ggactaacgg ataatccgct cgtttcaatg agtgccacca
    12601 gccattttga gcaatggaaa gccaatattg aaaaagcgat tgtttctatt gagcagggcg
    12661 attttcaaaa agtggtattg gcaaatgcga tgagacttca ttttgagcaa cccatttgtg
    12721 cttacagctt gctggcacaa agccaaaaaa caaatttagg ttgttaccac tttttatggg
    12781 cggaaagtgc tgatgttgcc tttcttggct caacccctga gcggctatat caacgccaag
    12841 ggctacactt ttctaccgaa gccctcgccg gcaccgctgc ggttaccacc agtgaagtgc
    12901 aaaccgaact caatgcacaa tggctgttaa gtgatcccaa aaatatctat gaaaatcaat
    12961 tagtggttga tgacattgaa aaccaactca aagattgcgt gaccgaattt gcagtatccg
    13021 aggcaaaaat taagcgtttg cataatgtgc aacacctacg ccgccaaatt caagcaacgc
    13081 tcaaaccgga cacctcagat tcagattgct taagcaaaat ccacccaact gcggcagttg
    13141 cagggcttcc ccgccaaaaa gcaaagggtt ttattaccga aaatgagcct tttacccgcc
    13201 attggtatgc aggtacatta ggcgtaatgg gcaacgagga agccgaattt tgcgtaacac
    13261 tccgttctgc attaatttca caaaattcaa ttacgcttta tgccggtgcc ggcattgtgt
    13321 caggctcaga tccacaatcg gaatggcaag aaattaaacg taaggcacaa ggaatggcaa
    13381 aactgttgga tgttgattta gtaacaaaag gggaactgta agctaggctt tcagaactta
    13441 atctcttaat tatttctttc tatattttca tttccaactt cccaacaaaa tatattattg
    13501 ccaccaaatt agtagtgaat attccataat taaaaaatt
//
LOCUS       DANLXD010000076        13505 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.076, whole genome shotgun sequence.
ACCESSION   DANLXD010000076 DANLXD010000000
VERSION     DANLXD010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13505
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.076"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..309)
                     /locus_tag="PXD18_001803"
     CDS             complement(<1..309)
                     /locus_tag="PXD18_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL6302211.1"
                     /translation="MIITMKDIAKEANVSLGTVSNVLNGKSNVSLAKIEKVQAAVEKL
                     GYRKNIQASTLKSGTSNKIAIILPNITELKYACLYENLDLICTQNDLSLILYLTHNRE
                     D"
     gene            complement(471..1811)
                     /gene="gdhA"
                     /locus_tag="PXD18_001804"
     CDS             complement(471..1811)
                     /gene="gdhA"
                     /locus_tag="PXD18_001804"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HDL6302212.1"
                     /translation="MSDLNALFQKIKQRDPNQAPFHQAVEEVFGSLAPFLAKNPKYTQ
                     QGLLGRIVEPERVISFRVTWVDDKGQVQVNRGYRVQMNSAIGPYKGGIRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMSELYRHIGADTD
                     VPAGDIGVGGREIGYMFGQYKKLRNEFTSVLTGKSLTWGGSLIRPEATGYGAVYFAES
                     MLATKGQQIEGKSVVISGSGNVAQYAAEKVIQKGGKVLTVSDSNGYVLFPESGMTEAQ
                     LQALLELKNERRERLSVYATEQGLKYFDGQKPWGVKCDIALPCATQNELDTEDAKELV
                     KNGCICVAEGANMPTTLGGVEVFIGAKILYAPGKAANAGGVATSGLEMSQNAIRLSWS
                     REEVDQRLFNIMKAIHENCVENGTEADGFVNYVNGANIAGFKKVANAMLEQGIV"
     gene            complement(2004..2345)
                     /gene="bamE"
                     /locus_tag="PXD18_001805"
     CDS             complement(2004..2345)
                     /gene="bamE"
                     /locus_tag="PXD18_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HDL6302213.1"
                     /translation="MKMKSLLAAMLLALGVTACSTVEKVVYRIDVPQGNYLEQDKIAQ
                     LKVGMTAEQVEYLLGTPMLKNIFETHRWDYVFIKREGYKDPEQRNLFIYFDAKGLVSK
                     IDDSNANAEQK"
     gene            complement(2412..3413)
                     /gene="yejK"
                     /locus_tag="PXD18_001806"
     CDS             complement(2412..3413)
                     /gene="yejK"
                     /locus_tag="PXD18_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein YejK"
                     /protein_id="HDL6302214.1"
                     /translation="MSINVSEIVLHQLQKTEGENPELNTFLRENLLAISPEVDQMMLQ
                     LHQAYQSKAKAYGIFKPESVFAQQLNRLLEQETDFLPFSHSCAKMLAAELIKYPFADG
                     GTFILCRYTFLATEYLFIALIDSRNSMLVDEQLEIKRTQYLEIAQYDIACRINLTELK
                     LDATSNRYLTFVKGRVGRKIADFFMDFLSAEEGFNPQLQNQTLLQAVSDYCEQGELSA
                     PQTREVKKQVFEYCKGQINSGEEIALNELSNALPTLNEIDFAQFTQEQEYGLEENIPP
                     MRNALKTLTKFSGSGKGVTISFNAELLGERLIWDELNDTLTIKGLPANLRDQLERNK"
     gene            3494..3880
                     /locus_tag="PXD18_001807"
     CDS             3494..3880
                     /locus_tag="PXD18_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDL6302215.1"
                     /translation="MTVIHTENAPAAIGPYVQAVDLGNMVLTSGQIPVNPETGEIPSD
                     IVQQTRQSLNNVKAIIEQAGLTVADIVKTTVFVKDLNDFAKVNAEYQAFFQENEHPNF
                     PARSCVEVARLPKDVGIEIEAIAVRR"
     gene            3912..4649
                     /gene="pgeF"
                     /locus_tag="PXD18_001808"
     CDS             3912..4649
                     /gene="pgeF"
                     /locus_tag="PXD18_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HDL6302216.1"
                     /translation="MDKIIPNWNVPKHIHALTTLRTGGVSKPPFDSFNLGDHVNDEPQ
                     DIAQNRALLVEKFQLPQAPLFLTQTHSTRVIELPYSGDNIKADAIYTNQPNQVCLVMT
                     ADCLPVLFASQDGSEIAAAHAGWRGLCDGILEATVEKFNCPPHEISAWLGPAIGPNAF
                     QVGSEVADQFCAFDPRAKEALIEDSTTSGKFLGNLYQIATQRLNKLGITAISGGEYCT
                     YSQPELFFSYRRDKQTGRMATLIWRTE"
     gene            4743..4818
                     /locus_tag="PXD18_001809"
     tRNA            4743..4818
                     /locus_tag="PXD18_001809"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4776..4778,aa:Ile,seq:cat)
     gene            5021..6235
                     /locus_tag="PXD18_001810"
     CDS             5021..6235
                     /locus_tag="PXD18_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6302217.1"
                     /translation="MTATKKPLSDTLLKNLKYSPNAKPIADSNGLFILAQKKAKVWIY
                     SYISPKTGKRSTKNRIGSYPQMSLAEARLKRDELNTLVLQGLDPFEHLAKMQREAKEK
                     QESIQSFAYKWADWKLSKGKCKPKTMEKCLQRLENHLFPRFEGYTLEDFTLTDTINRL
                     TDLDRIMPDTLHRIAGNLIEILDYAVLCGRINFNPISVIKKAFSSVSTTHQPAIMPEE
                     LAEFMQDLQKSNRTPQIKLLVEWQLLNILRPFEAVAVQWSDIDWETKTLNIPADRMKG
                     GKNPHSVPLTKQAIAILEEMKKYNGHHKHIFTHRTDRNKPANSQTVNNAIKRLSGGKY
                     KGLLVAHGLRSIASTYLHERFTTETLVIEACLSHTNKDTVMSAYHRKNWLDRRRGIMQ
                     EWADFVEQCKSI"
     gene            6705..6911
                     /locus_tag="PXD18_001811"
     CDS             6705..6911
                     /locus_tag="PXD18_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HDL6302218.1"
                     /translation="MENTPAKQRFMKIDEVSAVTTLSETQIYRKMKAGDFPQSISIGA
                     NSKVWLESEIQQWIQRKIEQHRNQ"
     gene            6921..7580
                     /locus_tag="PXD18_001812"
     CDS             6921..7580
                     /locus_tag="PXD18_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302219.1"
                     /translation="MTLETFNQQKAKFHEQEKAVLAIQTELDKAKNILEALQNEKAEF
                     VARQKTNLANIGTLSADEYVEIKNKNSGLQARIEYYQALIVDLENKCYAEQEILFQQQ
                     NELKQIRRIILLEKAEVLFNQFIEQNKENLAEIYTYLFYSGKFKQNKNLTDESEEQAI
                     LAYLTENIMARIEKEQPLEKTLILYSEQLASFEQKSPMALHREKFEAKPTGLAELINN
                     L"
     gene            7591..8541
                     /locus_tag="PXD18_001813"
     CDS             7591..8541
                     /locus_tag="PXD18_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P2 family phage major capsid protein"
                     /protein_id="HDL6302220.1"
                     /translation="MSLSTFAHALKLDKQGNVILFDDSPEEQAKLISRLKQNRLFKLL
                     NLVQTKHAKGEAIGLFTPIAGTTNTESGEEREPKQALAPAQKYHCEQINIDSYIRYEK
                     IDAYNLENSLEERLNQLLDDNLLRGLLMVGWQGVSRADTSNATNNQLAQDVKKGWLQK
                     IREGKPEAVINGATIGKEQQYKSLNALIKQGLGKISPAYAMGGDMIAICGRDIIADDV
                     IQLEHNDLSENLADLLTLCQQAKGGLKAVSIPYFPSNAILITRLDNLSLYLHLNNIRR
                     KAFDTPQKDSVETFYSLNVDYIVEDFNACCLIENIEVIEE"
     gene            8538..8732
                     /locus_tag="PXD18_001814"
     CDS             8538..8732
                     /locus_tag="PXD18_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302221.1"
                     /translation="MSLESYIQQAEEMELLEKLDFVSDLLELEKVSEIEAYRILTAHG
                     EPKPQPAQEKLIGCVDFLDD"
     gene            8850..9698
                     /locus_tag="PXD18_001815"
     CDS             8850..9698
                     /locus_tag="PXD18_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302222.1"
                     /translation="MTNYKLPARKWYTLEQATKRIKQLTGEDIEIEDLLHYWYLRKLE
                     LSIYLNRNGNGDLIIGNHSFNKEEYIVLEQPQIIIREDGSIELEGKESEEEFELEHIF
                     KKYRFDSFSTYTGLISIYSSTFGSVNIESEIIKNGICLNFARQLISAKHPETKKRISL
                     HLKILDFDKGRNTYLAPADLFILDEHLNEFILGNGGDEIEKISKNNKTQFSSTIRENQ
                     INFIRALLYMDYGIETPQEVKNAINSGELGRKIEKFRRENPNIENDKNFKFPTSVTLS
                     NWYSKA"
     gene            9776..10027
                     /locus_tag="PXD18_001816"
     CDS             9776..10027
                     /locus_tag="PXD18_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6302223.1"
                     /translation="MQLQKTISTFTQPNHRGIYVMTYSEQSYLNVKDVCEMLQLNRST
                     IYRQIKQGIFPKPTKIGKSSRWKFADIKAFLEPKPQEAN"
     gene            10027..10407
                     /locus_tag="PXD18_001817"
     CDS             10027..10407
                     /locus_tag="PXD18_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6302224.1"
                     /translation="MAGLSIICPFCGNTARIRGSSRPSLLSYQAQLTCSNCGQLKADF
                     VGQLINIKRAVFIECDEANQWDKPENELIKEGKIQGKDNAQRLKELRGSQQDLFAKVP
                     GQLPPEKITPAEKIAKRANLSKTH"
     gene            10718..11779
                     /locus_tag="PXD18_001818"
     CDS             10718..11779
                     /locus_tag="PXD18_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HDL6302225.1"
                     /translation="MKDLSPNQKQYTPFSAIMQKNLMDLLTKSARSPYSFSTVAKSTA
                     GRENPELHNTANSSTPLTRAIFIRSLHTPKERRNKACSSMVACSGQGSPLAVFGSPFV
                     AVFSPRYTLSPCTVRSVADSPLKLTNGLQKMNPSQITGKNRLNSFLFNNNQNDYSLLF
                     TNAKQSTPISAKISKNQDLCLTTLNRSPYASRAFAKSKAECGNSKEHQANNSTPLTRA
                     FFVRSSRTPKECQNKACSSMVACSGQGFALDCLPDVAVFHPVTRYRPTLWKMLAIAPK
                     NQHQELSKMKAFAYSFLCAIRTPETDTYQETVVRIISDSEQNARFQLTADYRLLLPRP
                     VAKIRLNSTAYTVKGGIYA"
     gene            11772..11936
                     /locus_tag="PXD18_001819"
     CDS             11772..11936
                     /locus_tag="PXD18_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302226.1"
                     /translation="MLNYSDIEQIRYFMDQAEEALDNNEEFKAVAELNTAQQFILALL
                     MNYEQGGENE"
     gene            11929..12564
                     /locus_tag="PXD18_001820"
     CDS             11929..12564
                     /locus_tag="PXD18_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302227.1"
                     /translation="MNNTTGQATQRNWQEIIANLQRLSESGESTIEIAKRYEAFSKTA
                     EQIQALVNNNGSEAEKEAFFAPVERFYLGLLETETRLKDAIAKDEENAQKLKEQKAAR
                     EAEQKRWDNLPFYAKDKFSDLICIESRETLEDKFFAISCMFDALKAVPNLLEIGLREE
                     GKDSVIDRLAEMSKLYLLFVDEQFSLLANEIQSGKYGKLDLNGSQNKGDLC"
     gene            12558..12776
                     /locus_tag="PXD18_001821"
     CDS             12558..12776
                     /locus_tag="PXD18_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302228.1"
                     /translation="MLTHRITLPDGTEIEFFAETDKETFAEIQRDLEGLKLPTFAEFV
                     AQERKKHRAKQAVKKARKIAKLARRKNR"
     gene            12918..13403
                     /locus_tag="PXD18_001822"
     CDS             12918..13403
                     /locus_tag="PXD18_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302229.1"
                     /translation="METALQLAQHLTGWTEEENSQAILKNFLDWKETFGEKTREETKI
                     VETLLDWINENEASFIEYPFNQEQRTPPKVAGYRILANNSTKTNEYFFIYPKQFKETL
                     AEFPLLMACTKLHEAGILHKPPRPEKGYEFQYTIAPKITGGSKKRAYKIVPIALEEEN
                     E"
BASE COUNT         4659 a         2794 c         2476 g         3576 t
ORIGIN      
        1 atcttctcga ttatgcgtta aataaagaat gagagataaa tcattttgcg tacaaattaa
       61 atcaagattt tcatataaac aggcatattt cagctctgta atattgggca atataatagc
      121 aattttatta cttgtgccac tttttaacgt agaggcttga atatttttac gataacccaa
      181 cttttcaacg gcagcttgta ctttttctat tttagctaag ctaacattac tttttccgtt
      241 taatacattc gatactgttc ctaacgaaac atttgcttcc tttgcgatat ctttcatcgt
      301 aatgatcata tactgccctt tcacatactg ctaaaactga gattggcata gattttacca
      361 taattggcaa atgaaatacg atttcaattt agcttgtctc tagctacaac ctaaaataaa
      421 aaaactgcct cgatatatcg aggcagttct tgaataatag ggataataaa ttaaacaata
      481 ccctgttcta acatcgcatt tgccactttt ttgaaaccag caatattcgc accgtttaca
      541 tagtttacga aaccatctgc ttcagtacca ttttctacgc agttttcgtg aattgctttc
      601 ataatgttga ataaacgctg atctacttct tcacgactcc aagatagacg aattgcattt
      661 tggctcattt ctaaacctga ggttgccaca ccacctgcgt tagccgcttt acccggagca
      721 taaaggattt tcgcaccgat aaagacttca acaccaccta atgtggttgg catatttgca
      781 ccttctgcca cacaaataca gccgtttttc actaattctt tagcatcttc ggtatctaat
      841 tcgttttggg ttgcacaagg taaagcgatg tcacatttca caccccacgg tttttgaccg
      901 tcaaagtatt ttaagccttg ttctgttgca tacacagata agcgttcacg gcgttcgttt
      961 ttcaactcta ataatgcttg taattgtgcc tctgtcatac cggattcagg gaataagaca
     1021 taaccgttag aatctgaaac cgttaatact ttaccgcctt tttgaatcac tttttcagct
     1081 gcatattgtg ccacgttacc cgaaccggaa attaccactg attttccttc gatctgctga
     1141 cctttagtcg ctaacataga ctctgcaaaa tacaccgcac cataaccagt tgcttccgga
     1201 cgaattaagc taccacccca agtcagcgat ttaccggtta atactgaagt aaattcattg
     1261 cgtaattttt tgtattgacc gaacatatag ccgatttcac gacctcccac gccgatatcg
     1321 cctgcaggaa cgtcagtatc agcaccaatg tggcgatata attcgctcat aaacgcttgg
     1381 cagaaacgca ttacttcggc atcagatttg cctttcgggt caaagtctga accaccttta
     1441 ccaccgccca ttggcaatgt cgttaacgca tttttgaata cttgctcaaa ggctaagaat
     1501 tttaatacgc ctaaatcaac ggttgggtgg aaacgaatac cgcctttgta tggaccgatt
     1561 gctgagttca tttgtacacg gtaaccacgg tttacttgca cttgaccttt atcatcaacc
     1621 caagtgacac ggaagctaat tacacgctca ggctcaacaa tacgccctaa taaaccttgc
     1681 tgggtatatt tcggattttt agctaagaaa ggggcaaggc taccgaacac ttcttcaacc
     1741 gcttgatgga aaggggcttg gttcggatca cgttgtttga ttttttggaa aagggcgttt
     1801 aaatcgctca tattatactc ctgaataaat tgatgatgtt gtgtatttaa gatgagcgaa
     1861 gtctagcaag caattttagc tttgaaaaga tagattagaa aaatttatca ttaaaataag
     1921 aaaaattaag tttaaatgct tattttttat tcaaaaaaat aagcccactt ttaaaagtgg
     1981 gcttttcgaa ccaacaaatc gtcctatttt tgttctgcat tcgcattgct gtcatcaatt
     2041 tttgatacta accctttagc atcaaaataa ataaacagat tgcgttgttc aggatcttta
     2101 taaccttcac gtttaataaa cacataatcc caacggtggg tttcaaaaat gttctttaac
     2161 attggtgtac caagcaaata ttcaacttgt tccgctgtca taccgacttt aagttgagca
     2221 attttatctt gttctaagta attgccttgc ggtacatcaa tacggtacac cactttctca
     2281 acggttgaac aagccgttac acccagtgca agcaacattg cagctaaaag agatttcatt
     2341 ttcataattg accttttgat aatccaaaat tcagataacg agataatacc taaactgata
     2401 aaaattttcc attatttgtt acgttccagc tggtcacgca gatttgccgg taatcctttg
     2461 attgtcagtg tgtcgtttag ttcatcccaa attaaacgct ctcctaataa ttctgcgtta
     2521 aagctaatcg ttactccttt gcccgaaccg gaaaatttcg tcagggtttt aagggcattt
     2581 cgcataggcg gaatattctc ttccaagccg tattcttgct cttgcgtaaa ttgggcaaaa
     2641 tcgatttcat tcagtgttgg caatgcgttg gaaagctcat ttaacgcaat ttcctctcca
     2701 ctatttatct gccctttaca atattcaaac acctgctttt tcacttctcg agtttgaggg
     2761 gcagataact ccccttgctc acaataatcg ctcaccgctt gcaacaaggt ttgattttgc
     2821 aattgtggat taaacccttc ttccgcactt aaaaaatcca taaagaaatc ggcaatttta
     2881 cgccctactc tgcctttcac aaaagttaaa tagcgatttg acgttgcgtc aagtttcagt
     2941 tcagttaaat taatgcggca ggcaatatca tattgtgcaa tttcgagata ttgcgtgcgt
     3001 ttaatctcta actgctcatc aaccagcatt gaattacggc tatcaatcaa cgcaataaac
     3061 aaatattcgg tagctaaaaa agtgtaacga cacaaaataa aagtgccacc atcggcaaac
     3121 ggatatttaa tcagctctgc tgcaagcatt ttggcacagc tatggctaaa aggtaaaaaa
     3181 tcggtttctt gctccaacaa gcggttgagc tgttgagcga aaaccgactc cggtttaaat
     3241 ataccgtaag cctttgcttt actttgatag gcttgatgta attgcaacat catttgatcg
     3301 acttcagggg aaattgccaa taaattttct cgcaaaaacg tattaagctc cgggttctcg
     3361 ccctctgttt tttgtaattg atgtaacacg atttcagaaa cattaatgct cattaattca
     3421 cttctcttta ttccaaataa taagaaaaga tattatcatt aatccgttta tttttcatta
     3481 agaggaacac aagatgacag ttatccacac agaaaatgca ccggcagcga ttgggcctta
     3541 tgtgcaagca gttgatttag gcaatatggt tttaacttct gggcaaattc ccgtgaatcc
     3601 tgaaaccggc gaaatcccga gtgatattgt gcaacaaacc cgccaatctc tgaacaacgt
     3661 gaaagccatt atcgaacaag ccggcttaac cgttgccgat attgtaaaga ccaccgtatt
     3721 tgtcaaagat cttaacgact tcgcaaaggt aaatgcggaa taccaagcct tcttccaaga
     3781 aaacgaacac cctaattttc cggctcgttc ttgcgtagaa gtggctcgtt taccaaaaga
     3841 tgttggcatt gagatcgaag cgattgcagt acgccgataa caagcggtca ttttcttgag
     3901 attttttgca aatggataaa attattccaa attggaatgt gcctaaacat attcacgcac
     3961 tgacgacctt aagaacaggc ggagtaagca aaccgccttt tgacagtttc aacttaggtg
     4021 atcacgttaa tgacgagcca caagatatcg ctcaaaatcg tgctttattg gttgagaaat
     4081 ttcaattacc acaagctccg ctgtttttaa cccaaactca cagcacccga gtgattgaac
     4141 ttccctattc aggtgataat attaaagccg atgcgattta caccaatcaa ccaaaccaag
     4201 tctgcttagt gatgactgca gattgtttgc cggtattatt tgccagccaa gacgggtcgg
     4261 aaattgcggc ggcacacgcc ggctggcgtg ggttatgcga tggcatatta gaggcgacgg
     4321 tagagaaatt caactgcccg ccacacgaaa tatcagcttg gctagggccg gctatcggac
     4381 cgaatgcttt tcaagtcggg agtgaagtgg cagaccaatt ctgtgctttt gacccaagag
     4441 cgaaagaagc ccttattgaa gacagcacta caagcggtaa atttttagga aatctttacc
     4501 aaattgccac ccaacgtctg aataaattag gcattaccgc catttcaggc ggtgaatatt
     4561 gcacctacag ccaaccagaa ctgttttttt cctaccgccg agacaaacaa accgggcgaa
     4621 tggcaacctt aatttggcga acagaataac cctattttct ctcgttcaat aattaaccga
     4681 gtaatcttct gcctctagac gactactcgg tttttctcta taattccaac cacttttcaa
     4741 atccccccat agctcagtgg ttagagcagg cgactcataa tcgcttggtc gctggttcaa
     4801 gtccggctgg ggggaccatc taagcgttgc atattgtctt tcattgtctc aaatttacta
     4861 taaaatcaag aacttagatt cttttatagt ctcttattgt cttctttagt tgcattgtat
     4921 cttagtgttt atgatcccta aaatgatccc tattttgaaa acgggaaaat ttagggatca
     4981 taaacttcga taaaccctta tatatcaagg attagaagaa atgactgcaa ctaaaaaacc
     5041 actttcagac acattactaa aaaatctcaa atattcccca aatgcgaagc ctatcgcaga
     5101 cagcaacggg ctatttattc ttgcacagaa aaaagcgaaa gtatggattt atagctatat
     5161 cagccccaaa acaggcaagc gaagcacaaa aaatagaatc ggtagctatc cgcaaatgag
     5221 cttagccgaa gcacgcttaa agagagacga actaaatacc cttgttttac aaggcttaga
     5281 ccctttcgag catttagcca aaatgcaaag agaagctaag gaaaagcaag aatctattca
     5341 atctttcgcc tataaatggg ctgattggaa gctatcaaag ggaaaatgca agcctaaaac
     5401 aatggaaaaa tgcttacagc ggttagaaaa tcatttattc ccacgttttg aaggctatac
     5461 gctggaagat tttaccttaa ccgatacaat caaccgctta acggacttag atcggataat
     5521 gcccgacact ttgcacagaa tagcagggaa tttaatagaa attcttgatt atgcggtatt
     5581 gtgtgggaga attaatttta acccaatcag cgtcattaaa aaggcgtttt ccagcgtaag
     5641 cacgacacac cagccagcaa taatgcccga agagttagcc gaatttatgc aagacttgca
     5701 gaaatcaaat agaacgcctc aaattaaatt attagttgaa tggcaactct tgaatattct
     5761 tagaccgttt gaagccgtag cggtgcaatg gagcgatata gattgggaaa ctaagacgct
     5821 caacattccg gcagatagaa tgaaaggcgg aaaaaatccg cattctgtac cgctaacaaa
     5881 acaagctatc gcaatcctag aggaaatgaa gaaatataac ggacaccata aacatatttt
     5941 tacacaccga acagaccgaa acaaaccggc taatagccaa accgtgaata atgcaataaa
     6001 acgcttaagc ggtggaaaat ataaagggct tttagtggct cacggtttaa gaagcattgc
     6061 cagcacctat ttacacgaac gttttactac tgaaacgcta gtaattgagg cttgtttatc
     6121 ccacacgaac aaagacaccg taatgagtgc ataccaccgt aaaaactggc tagaccgcag
     6181 acgtggaata atgcaggaat gggcggattt tgtagaacaa tgcaagagca tttaaatgac
     6241 aaaggcggag caatccgcct ttctttttgc ttgatgaaaa attttcattt tttcctatca
     6301 gctcccagcc cgtgccgtct atcccacgcc tcgcccgcac acttaaagtc tcgatttcta
     6361 cgcaaatgca aaattaagcc caaacattgc cccgtatagc gtgaaaaact ttcatatagc
     6421 cgttttttat tacgcaattt tacgcaagaa aacgcaaatt tacgcaggca gaaacaccac
     6481 ttttaaaaac tcgatgacag aacgatgaaa gaaccgctga aaacttgcaa aaaatcagag
     6541 aaaaataacc gcttgcaagt tttccaaatc agaattaagc ccctctaatc tgtaaaatct
     6601 cctttcacag ccctaacaaa tagcaaaaaa tccaagatga tttattcttt cacacgttag
     6661 caggcaatag cacgccaaag caaattttta cggagtaaaa caaaatggag aacacaccag
     6721 caaaacagcg atttatgaaa atagatgaag tttcagccgt aactacgctt tcagaaacgc
     6781 agatttatcg caaaatgaaa gccggcgatt ttccccaaag tatcagtatt ggggcaaata
     6841 gcaaagtatg gctagaaagt gaaatccagc aatggattca acgcaaaatt gaacaacacc
     6901 gcaaccaata agggcaaatt atgacacttg aaacatttaa ccaacaaaaa gctaaattcc
     6961 acgaacaaga aaaagccgtt ttagctattc agaccgaatt agacaaagcg aaaaatattc
     7021 ttgaggcatt gcaaaacgaa aaagcggaat ttgtcgcacg gcaaaaaacg aatttagcca
     7081 atatcggcac gctttcagca gatgaatatg ttgaaatcaa aaataaaaat agtggtttac
     7141 aagcacgcat agaatattat caagcgttga ttgttgattt agaaaataaa tgctacgcag
     7201 agcaagaaat attattccaa cagcagaatg aactaaaaca aatcagacgt ataattttat
     7261 tagaaaaagc agaagtatta tttaatcaat ttattgaaca aaataaagaa aatttagcag
     7321 aaatttatac ttacttattc tacagtggaa aattcaaaca aaataaaaac ctcacagatg
     7381 aaagtgaaga gcaagctatt ctggcatatc taacagaaaa tataatggct agaattgaaa
     7441 aggaacagcc acttgaaaaa acattaattc tttattctga acagttagca agttttgaac
     7501 aaaaatcgcc aatggcatta caccgtgaaa aatttgaagc aaaacctacc ggcttagctg
     7561 aattaattaa taacttataa gaggtaaaaa atgagtttat ccactttcgc ccacgcatta
     7621 aaactagata aacaaggtaa cgttatttta tttgacgata gccccgaaga acaggcaaaa
     7681 ctaattagcc gcttaaaaca aaatcgcctt tttaaattat tgaatttagt gcaaaccaag
     7741 cacgcaaagg gcgaagcgat tgggctattc acaccgatag ccggcacaac caacaccgaa
     7801 agcggagagg aacgagagcc aaaacaagcc cttgcacccg ctcaaaaata ccactgcgaa
     7861 caaatcaaca ttgatagcta tattcgctat gaaaaaatcg atgcttacaa cctcgaaaac
     7921 agcttagaag aacgcttaaa tcagttactt gatgacaacc ttctaagagg gcttttaatg
     7981 gttggctggc aaggcgtaag ccgtgcagat acatcaaacg cgacaaacaa ccaactcgcc
     8041 caagacgtga aaaaaggctg gctacaaaaa atcagagagg gcaagcccga agcggtaatt
     8101 aatggagcaa ccataggcaa agagcaacaa tacaaaagcc taaatgctct gattaagcag
     8161 ggattaggca aaattagccc agcgtatgca atgggcggag atatgatcgc catttgtggg
     8221 cgggatatta tcgctgatga tgtaattcag cttgaacaca acgatttaag cgaaaaccta
     8281 gccgacttat taaccttatg ccaacaagct aaaggcggac taaaagcggt aagtattccc
     8341 tacttcccaa gcaatgcgat tttaatcact cgattagata acctttcgct atatcttcat
     8401 ttaaacaata tccgccgtaa agcgtttgat acgccacaaa aagacagcgt agagacattt
     8461 tactccctca atgtggatta cattgtagaa gattttaacg cctgttgttt aattgaaaat
     8521 attgaggtta ttgaagaatg agcctagaaa gctatatcca acaagcggaa gaaatggagc
     8581 ttttagaaaa actcgatttt gtttcagacc tgttagaact tgagaaagtc agcgaaattg
     8641 aagcctatcg cattttaacc gcccacggcg aacctaaacc ccaaccggca caagaaaagc
     8701 taataggttg cgtagatttt cttgatgact aacccaagcc ccgaaagggg ctttttgcat
     8761 ttttgcaaca aaaaacgacc gcttgcaccc tttgaaatta ttgctatcat taataaaaaa
     8821 caataaccaa atcaaatgag agtacagcaa tgacaaacta taaactaccg gctagaaagt
     8881 ggtacacctt agagcaggca acaaaacgca ttaaacaact cactggcgaa gatatagaaa
     8941 tagaagattt attacattat tggtatttaa gaaagctaga attaagtatt tatttaaata
     9001 gaaacggaaa tggcgatctg attataggca atcattcttt taataaagaa gaatatattg
     9061 tcttggaaca accacaaata atcataagag aagatggctc tattgaatta gaaggcaaag
     9121 aatcagaaga agaatttgaa ttagaacata tatttaaaaa gtataggttt gatagtttca
     9181 gcacttatac tggattaatt tctatttaca gcagtacttt tggtagtgta aatattgaat
     9241 ctgaaatcat taaaaatgga atttgtttaa attttgcaag acaattaata tcagcaaagc
     9301 acccagaaac aaaaaaaaga ataagtttac atctaaaaat actggatttt gacaaaggca
     9361 gaaatactta tttagcacct gcagatttat ttattcttga tgaacatcta aatgagttca
     9421 tattaggtaa cggcggagat gaaatagaaa aaatatcaaa gaataacaaa actcaattca
     9481 gctcaacaat acgagaaaac caaatcaatt ttattagagc cttgctttat atggattatg
     9541 ggatagaaac gcctcaagaa gtaaaaaacg ccattaattc aggggaacta ggcagaaaaa
     9601 tagagaaatt taggagagaa aaccccaata tagagaacga taaaaatttc aaattcccta
     9661 caagtgtaac ccttagcaac tggtattcaa aagcctaaaa tattggaaat ttccgaatct
     9721 actttggaaa tttccaaact tctaaaacct actcacctca caatctcccc caacaatgca
     9781 actacaaaag acaataagca cattcacgca accaaaccac agggggattt atgtaatgac
     9841 ctattcagaa caaagctatt taaacgtgaa agatgtatgc gaaatgctac aactcaaccg
     9901 ctcaactatt tatcgacaaa ttaagcaagg gattttccct aagccaacta agatcggaaa
     9961 atcaagccgg tggaaatttg ccgacatcaa agcattttta gagccaaaac cacaggaggc
    10021 gaactaatgg cagggctttc tattatttgc ccgttttgtg gcaataccgc acgaattaga
    10081 ggcagttctc gccctagcct tttaagttat caagcacagc taacttgttc aaattgcgga
    10141 caattaaaag ccgactttgt agggcagcta atcaacatca aacgggccgt atttattgag
    10201 tgtgatgaag caaatcaatg ggataaaccc gaaaatgaac taatcaagga gggaaaaatt
    10261 caaggcaaag acaatgctca acgcctcaaa gaactaagag gctcacagca agatttattt
    10321 gcaaaggtgc cggggcaact accgcccgag aagatcactc cggcggagaa aatcgccaag
    10381 cgggcaaacc tttcaaaaac gcattaaaca gggggataaa tggcaacaaa aaagccccgc
    10441 aaggcaaacc atacggagct attaaaatcg cataatgcga aagatatgca aagaaattaa
    10501 agcaggcttg acgatttctg aaggtgttag attctttcta aagtctttag ggataggttt
    10561 atttctagca ttgttttttt attttttgcc gtatttagca gaatttataa tcgccgtaaa
    10621 aaaacaacta gcaaaaaaat cggcttactt tcaatgataa aagcaagccg aaatgacaat
    10681 ccaaattttt aactttaaat aaagagtaca agaagaaatg aaagatttat ctccaaatca
    10741 gaaacaatat acgccatttt cggctataat gcaaaaaaat ttaatggatt tattgacaaa
    10801 atccgcccgt tcgccttatt ctttctctac cgttgcaaaa tcaacggcag ggcgtgagaa
    10861 ccctgaacta cataatacgg cgaacagtag cacgccttta acccgtgcta tttttattcg
    10921 tagcttacac acacctaaag aacgccgaaa taaggcgtgt tcgtctatgg tagcgtgtag
    10981 cgggcaaggt tcgcccttgg ctgtttttgg ttcgccgttt gtagcagttt tctcaccccg
    11041 ttacacgcta tcgccctgca ccgtgagaag tgtagccgat agtcctttaa aattaacaaa
    11101 cggactacaa aaaatgaacc ctagccaaat tacaggcaaa aaccgcctaa actcttttct
    11161 atttaacaat aatcaaaatg attattcgct attatttact aatgcaaaac aatcaacccc
    11221 gatttctgct aaaataagca aaaatcaaga tttatgcttg acaaccctca atcgttcgcc
    11281 ttatgctagc cgtgcttttg caaaatcaaa agccgagtgt ggaaactcga aagaacatca
    11341 ggcgaacaat agcacgcctt taactcgtgc tttttttgtt cgtagctcac gcacacccaa
    11401 agaatgccaa aataaggcgt gttcgtctat ggtagcgtgt agcgggcaag gtttcgccct
    11461 tgactgctta cctgatgttg cagttttcca ccccgttaca cgctatcgcc ctacattgtg
    11521 gaaaatgtta gcgatagccc ctaaaaatca acatcaggag ctatcaaaaa tgaaagcatt
    11581 cgcttattca ttcctttgtg ctattcgcac acccgaaaca gatacttatc aagaaaccgt
    11641 agtacgcatt atttcagaca gcgaacaaaa cgcccgtttt cagcttacag ccgattatcg
    11701 cttactactc ccccgccctg ttgcaaaaat ccgcctaaat tctaccgctt acacggtgaa
    11761 aggggggatt tatgcttaat tattccgata ttgaacaaat ccgctatttt atggatcaag
    11821 ccgaagaggc tttagacaat aatgaagagt tcaaagccgt agcagaactt aacacagcac
    11881 aacaatttat tctggcttta ttaatgaact acgaacaagg gggtgaaaat gaataataca
    11941 acaggacaag ctacgcaaag aaactggcaa gaaattatcg ctaatttgca gagactcagc
    12001 gaatccgggg aaagcacaat cgaaatcgct aaacgctatg aggcattttc taaaaccgcc
    12061 gagcaaatcc aagccctagt gaataacaac ggcagcgaag ccgaaaaaga ggcgtttttt
    12121 gcccctgttg agcgttttta tcttggctta ctagaaaccg aaacacgctt aaaagatgcc
    12181 atagccaaag acgaagaaaa cgcccaaaaa ttgaaagagc aaaaagcagc tagagaggca
    12241 gagcaaaaaa gatgggacaa cctacctttc tacgccaaag acaaattcag tgatttaatt
    12301 tgcattgaaa gccgagaaac gcttgaagat aaattctttg cgatctcttg tatgttcgat
    12361 gccctaaaag ccgtacctaa tctattagaa ataggcttgc gtgaagaagg caaagacagt
    12421 gttatagacc gattagccga aatgagcaaa ctctatttac tgtttgtaga tgagcaattt
    12481 tcactactgg caaacgaaat tcaaagcggt aaatatggca agttagacct aaacggctca
    12541 cagaataagg gggatttatg ctaacgcacc gcattacact ccctgacggc acagaaattg
    12601 aattttttgc agaaaccgac aaagaaacat ttgcagaaat tcaaagggac ttagagggct
    12661 tgaaattgcc aacctttgcc gagtttgttg cccaagagcg gaaaaaacac cgagcaaaac
    12721 aagcggtcaa aaaagcccga aaaattgcaa aattagcaag acggaaaaac cgctagcacc
    12781 tatcaaaaag acttattatt gcagaaaatc acgctttaat aaaaacgacc tataaagcaa
    12841 tccgcaagaa atggttaagt ttaactgaaa atatgagcgg acaggttcag cgggtagcgt
    12901 gcgatagatt cgcaataatg gaaaccgcct tgcagttagc ccaacattta acaggctgga
    12961 cagaggaaga gaacagccaa gcgattttaa aaaacttcct agactggaaa gaaactttcg
    13021 gcgaaaaaac aagagaagaa actaaaatag tagaaacctt gctagattgg ataaatgaaa
    13081 atgaggcgag ttttatcgag tacccattca accaagagca aagaacaccg cctaaagttg
    13141 ccggctatag aatacttgcg aataacagca ctaaaacaaa tgagtacttt ttcatttacc
    13201 ctaagcaatt taaagaaacg ctggcagaat ttccgctatt gatggcttgc accaagttac
    13261 acgaggcagg gattttacat aagccaccac gcccagaaaa aggctatgaa tttcagtaca
    13321 caatagcccc taaaataaca ggagggagca aaaaaagagc ttataaaatc gtaccgatag
    13381 cattggaaga agaaaacgag taattacagc aaaagcaaga gtttcaattc ttgctttttt
    13441 tatacttcaa acaaaataaa aataaataca aattaaaaat ttatagggaa aatagggaaa
    13501 aaata
//
LOCUS       DANLXD010000077        13242 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.077, whole genome shotgun sequence.
ACCESSION   DANLXD010000077 DANLXD010000000
VERSION     DANLXD010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13242)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13242)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13242
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.077"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            1..621
                     /locus_tag="PXD18_001823"
                     /pseudo
     CDS             1..621
                     /locus_tag="PXD18_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021111752.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            873..2063
                     /locus_tag="PXD18_001824"
     CDS             873..2063
                     /locus_tag="PXD18_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000616649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HDL6302230.1"
                     /translation="MSTSQQLIQQTEHFGANNYLPLPIVISKAKGIWVEDPEGNRYLD
                     MLSAYSAVNQGHCHPKIVQALKDQADKVTLTSRAFYNDQLGIWYEKICKLANKEMALP
                     MNTGAEAVETAIKTARRWGYDVKGIAENQAEIIACVGNFHGRTMAAVSLSSDPDYKRG
                     FGPMLGGIKLVPYGDLEALKAAITPNTAAFLVEPIQGESGILIPPEGFLEQAYELCKE
                     NNVLFIADEIQAGLGRTGKLFATEWEGFEPDIYILGKALGGGVFPISCVLANRDILGV
                     FNPGSHGSTFGGNPLACAVSIASIDVLLEEKLAERSRELGEYFLAELKKIQNPIIKEV
                     RGRGLFIGLELHQPARPFCEKLKEKGLLCKETHDTVIRFAPPLVIEKFNLDWALEKIR
                     EVLA"
     gene            2138..3649
                     /gene="nhaC"
                     /locus_tag="PXD18_001825"
     CDS             2138..3649
                     /gene="nhaC"
                     /locus_tag="PXD18_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HDL6302231.1"
                     /translation="MLILQTFSKNQPLVKGGFMSNRTEITDQNIRIPFRYAILPVIIM
                     VSIMAVAIIKFEASPHVPLLIGAISAAVIAMAHGYRWETIEKGIYRGIRMALPAIVII
                     IMIGLTIGAWLGGGIVATMIYYGLKLISPSLFLVTISIICAIVTLAIGSSWSTMGTIG
                     VAAMGIGFSLGIPAPMVAGAVISGAYFGDKMSPLSDTTNLAAGITETNLFEHIRHMFI
                     TTVPAFLIALSVYFYFGMEFRAENLDLAKIEDIMQAMQEHFLISPWLLLVPLLVVVLV
                     AKKVPALPALAAGIILGWLCHVFVQGGDVSVAVITLHDGYKIESGHEMIDKLFNRGGI
                     ESMMYTISLTIVAMTFGGIAEQAGMLHSVVEKILTLAKSAGSLISATIVSAFITNVTT
                     SEQYISILLPGRMYIKAYRDKGLSSRNLSRALEDGGTVTSVLVPWNTCGVYAFSMLQV
                     SAFEYAPYAIMNWLIPLIAIGLATLNIKIERLPPEELAKEPEEITLPKRGCCP"
     gene            3766..7365
                     /gene="putA"
                     /locus_tag="PXD18_001826"
     CDS             3766..7365
                     /gene="putA"
                     /locus_tag="PXD18_001826"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HDL6302232.1"
                     /translation="MMSYQLLPNTTIRPELSRHYRFDEQTLVQNLIEQAHCDEQADNI
                     KKLTTQLVGKVRTARQKASGVDALMHEFSLSSQEGVALMCLAEALLRIPDTATADKLI
                     RDKIAKGDWRSHTGNSPSLFVNAAAWGLVITGKLVSTHSESSLSSALSRLIAKGGEPL
                     IRKGVDVAMRMLGKKFVTGETIQQAIKNGEKRFAMGYRYSYDMLGEAALTAEDAKRYY
                     NDYVASIHAVGATSKGLGVYKSSGVSVKLSAIHPRYSLSQHQRVMDELYPRLKELFLL
                     AKKYDIGLNIDAEEADRLELSLDLMDRLLADPDLAGFNGIGFVVQAYQKRCPYVIEHL
                     IETARKHNRQLMIRLVKGAYWDTEIKRAQMDGAEGYPVFSRKVHTDLNYIVCAKKLLA
                     AQDVIYPQFATHNAQTLATIYHLAQGKRFEFQCLHGMGESLYDQVVGSDNLNVQCRIY
                     APVGTYQTLLAYLVRRLLENGANSSFVSQIVDENLSVDDLAQAPVQKAELTNGTMHPK
                     IPLPVDLFDDNRVNSKGYDLTDAVSLQNLENALNELTKQHYRAEPQLANDNTSGQESR
                     KIYNPANQAELVGEVIDATENDMEQAFESAAAFQSEWANTSPAVRAECLEKMADLMEA
                     NMPQLFDLAVREAGKTLNNAIAEVREAVDFCRYYAKEVRNNIEAYKNPRGIVVAISPW
                     NFPLAIFVGEVSSALVAGNVVLAKPAEQTSLMAHYAVSLFYQAGVPKAALQCLPGRGK
                     TVGVALVADHRVNGVIFTGSTETAKNINRNLHKNEKIIPLIAETGGQNAMIVDSSALG
                     EQVVIDVLNSAFDSAGQRCSALRVLYLQRDVADHILTMLKGAMAELKVGLPQHLTTDV
                     GPVIDKVAQQRLLDHIENLKKSAKSYYQVAISSEIAENGIFVPPTLLEIDHISQLKHE
                     VFGPVLHVIRFDADKLDQVIADINSTGFGLTSGLHSRIDETVDLWLKSVHAGNLYVNR
                     NTVGAVVGVQPFGGMGLSGTGPKAGGPLYLQRLVNRQEWTLNGLQGNAQAVDFDLNFA
                     IRKVLSGAEQQTALDLAKSLARRSPLGKTYPMQGITGEKNEMIFVARPQIGISKGNLA
                     SQVQALIAIVTVGSQAVAEKSSELAKHASAFGKKLQVVDDFNSLDHLSTLIVLDLLSS
                     EEKLHHAERKGAILTYIEGLDLALSLLPLVHEKAISINTAAAGGNASLMSEMD"
     gene            7474..8124
                     /locus_tag="PXD18_001827"
     CDS             7474..8124
                     /locus_tag="PXD18_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISMha3 family transposase"
                     /protein_id="HDL6302233.1"
                     /translation="MRKSRLSQYKQHKLIELFVAGVIARTAAELVNVNKTTAAYYFHR
                     LRLLIYQHSPHLEMFEGEIEIDESYFGGHRKGKRGRGAAGKTAVFGLLKRDGKVYTVV
                     VPNTQSATLLPIIREKVKPDSLVYTDFYRSYDVLDVSEFNHFRINHSTHFAENQNHIN
                     GIENFWSQAKRHLRKFNGIPKAHFELYLKECEWRFNHSDLKSQIFLLKQLVKGGLG"
     gene            complement(8125..9012)
                     /locus_tag="PXD18_001828"
     CDS             complement(8125..9012)
                     /locus_tag="PXD18_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide transport protein"
                     /protein_id="HDL6302234.1"
                     /translation="MNKLTQLALISLAFTGSAFAAPKSFTYCLESSPAALNPQIATDG
                     ATLDVGQAIYNRLIDFEKGTTNLTPSLAERWEISEGGKIYTFFLRQNVQFQSNKSFTP
                     SRYFNADDVIFSINRQFDKTNPYHKLSGGNYEFFYGMNMQNIIKNVTKVDDYTVKIEL
                     SEPNAPFLANLAMDFMAIFSAEYANKMQIAGTPEKLDLEPIGTGAFQFYGYQKDAAVR
                     FTAFEHYWEGKAKIDRLVFSITPDASVRLAKLEKNECQAMPYPNPSDLSALKANKDIQ
                     LFEKSGLNIGYITFRGCPR"
     misc_feature    complement(9038..9183)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            complement(9360..10370)
                     /gene="mglC"
                     /locus_tag="PXD18_001829"
     CDS             complement(9360..10370)
                     /gene="mglC"
                     /locus_tag="PXD18_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018355241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     permease MglC"
                     /protein_id="HDL6302235.1"
                     /translation="MSALQQNRTLDFFKQNAIYFVLLILLIVIIVQDPSFLSLRNFSN
                     ILSQSSVRLIIALGVAGLIVTQGTDLSAGRQVGLAAVISATLLQSMENMNKVFPNLSE
                     IPIPVVVLTVCAIGAVIGLFNGFVVAYLNVTPFIATMGTMIIVYGINSLYYDAVGSSP
                     IAGFSDDFSTFAQGFFRFGDFRLSYITIYAVIATIIMWTLWNKTRFGKNVFAIGGNPE
                     AARVSGVNVPLNLMGIYMLSGIFYAFGGMLEAGRIGSATNNLGFMYEMDAIAACVVGG
                     VSFAGGVGTIIGVVTGVLIFTVINYGLTYIGVNPYWQYIIKGGIIILAVAIDSLKYAK
                     KK"
     gene            complement(10384..11883)
                     /gene="mglA"
                     /locus_tag="PXD18_001830"
     CDS             complement(10384..11883)
                     /gene="mglA"
                     /locus_tag="PXD18_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005709009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     ATP-binding protein MglA"
                     /protein_id="HDL6302236.1"
                     /translation="MTGEVLLTMTNVSKSFPGVKALDNANLTVKSHSVHALMGENGAG
                     KSTLLKCLFGIYAKDEGDILFLGKPVNFKTSKEALENGISMVHQELNLVKQVTVMDNL
                     WLGRYPLKGPFVDHDKMYRDTKAIFDELDIDVDPRDKVAKLSVSQMQMIEIAKAFSYN
                     AKIVIMDEPTSSLSEKEVEHLFKIIQKLKDRGCGIIYISHKMDEIFKICDEITILRDG
                     KWVNTVAIKDTSMDQVVSMMVGRELTQRFPEKTNLPKEVILEVEHLTAKNQPSIQDVS
                     FSLRRGEILGIAGLVGAKRTDIVETIFGVREKAGGTIRLNDKEINNRNAFDAINNGFA
                     LVTEERRSTGIYANLSIEFNSLISNMKSYLGKFGLLSNKKMKSDTQWVIDSMNVKTPS
                     HQTHIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDIGAKFEIYQLILELANKDK
                     GIIMISSEMPELLGVTDRILVMSNGKVAGIVETAHTSQEEILQLAAKYL"
     gene            complement(11955..12944)
                     /gene="mglB"
                     /locus_tag="PXD18_001831"
     CDS             complement(11955..12944)
                     /gene="mglB"
                     /locus_tag="PXD18_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HDL6302237.1"
                     /translation="MKKAVLSAVAMAVALGATISTAQAENRIGVTIYKYDDNFMALMR
                     KEIEKEGKTQKVELLMNDSQNTQSIQNDQVDVLLSKGVKALAINLVDPSAYKTIIQKA
                     KSEDVPVVFFNKDPGAAAIDSYPKAYYVGTEPKESGIIQGELIAKQWKAHPELDLNKD
                     GKIQFALLKGEPGHPDAEARTKYVVESLKAQGIDSEQIFMDAALWDAAQAKDKVDAWL
                     SSGKAKDIEVIISNNDGMALGALEATKAHGRKLPIFGVDALPEALQLIKKGELAGTVL
                     NDGVNQGKAVVQLSANLADGKDAVAGTQWKLENRVVRIPYVGVDKDNLSEFLK"
BASE COUNT         3810 a         2775 c         2832 g         3825 t
ORIGIN      
        1 caacataaac tcattgaact gtttgtagca ggtgtcactg ctcgaacagc ggctgagttg
       61 gtgaatgtaa acaaaaccac cgctgcctat tactttcacc gtttgcgatt gctcatctat
      121 caacatagcc ctcatctgga aatgtttgag ggtgaaattg aagcggacga aagttatttc
      181 ggtggtgctc gcaaaggtaa acgagggtgt ggtgccgcag gcaaaactgc cgtatttggg
      241 ctgttaaaac gtgatgacaa ggtttatacc gttgtcgtac caaatacgca atctgccaca
      301 cttttgccga ttattcggga gaaagtgaag ccagacagcc ttgtttacgc cgatttttat
      361 cgaagctatg atgtgcttga tgtgagtgaa tttaaccatt ttcgtatcaa tcacagcaca
      421 cacttcgctg aaaatcacaa tcacattaac agaattgaga atttttggag ccaagcaaaa
      481 cgccatttgc gtaaatttaa cggcatacct aaagctcatt ttgagctgta tttgaaggaa
      541 tgcgaatagc gttttaatca cagtgactta aaatctcaaa tttccatttt aaaacagttg
      601 gttaggggtt gtttaagtta gttatctagg acagccctaa attttgtagt tggaatttca
      661 acggagaaag ttatctataa acttacaaaa gttatagaaa atggaggcat ttttgcttaa
      721 agtatgctat ctattcatat taattgcata gttaatcaac aactgaagaa aaattagaag
      781 tagatcataa aatcaacaaa aagtccgtgc tttttagcta aagattgtta aactcttttg
      841 tgttacaagt ttttaacata aaggagtttt ttatgtctac ttctcaacaa ctcatccaac
      901 aaaccgaaca tttcggtgcc aataactacc tacctctacc tattgttatt agtaaagcta
      961 aaggcatttg ggttgaagat cctgagggta atcgctattt ggatatgctt agtgcctact
     1021 cagcggttaa tcaagggcat tgtcatccaa aaattgtaca ggcactaaaa gatcaagcag
     1081 acaaagtaac gctgacctct cgagcatttt ataacgatca acttggtatt tggtatgaaa
     1141 aaatctgcaa actcgctaat aaagagatgg cattaccgat gaatacgggt gcagaagcgg
     1201 tagaaacagc gattaaaact gctcgccgtt ggggttatga tgtgaaagga attgcagaaa
     1261 atcaagcaga aatcatcgct tgtgttggca attttcacgg acgaacaatg gctgcagtat
     1321 ctctctcgtc tgatccggat tataaacgtg gtttcgggcc gatgttaggt ggcatcaaac
     1381 ttgttccata cggtgattta gaagcattaa aagctgcgat tacaccaaac acagcagcgt
     1441 ttttggttga gccaatccaa ggtgaatctg gcattcttat tccacctgaa ggtttcttgg
     1501 aacaggctta tgaactatgc aaagagaata atgtgctgtt tattgctgat gaaattcagg
     1561 caggtcttgg gcgtactggc aagttatttg caacagaatg ggaaggcttt gagccagata
     1621 tttatattct aggtaaagca cttggtggcg gggtgttccc aatctcttgt gtgttagcaa
     1681 atcgtgatat tttaggcgta ttcaatcctg gctcgcacgg ttcgacattt ggtggtaatc
     1741 cattagcctg tgcggtatct attgcctcaa ttgatgtact gttggaagaa aaacttgcag
     1801 agcgttcccg tgagttaggt gaatacttct tggcagagct gaaaaaaatc caaaatccaa
     1861 ttattaaaga agttcgtgga cgtggactgt ttattggctt ggagttacat caaccagcac
     1921 gcccattctg cgaaaaactc aaagaaaaag gcttactctg caaagagacc cacgatacag
     1981 ttatccgctt tgctccccct ttggtgattg aaaaattcaa tttggattgg gcattggaga
     2041 aaattcggga ggtgttggct taattgtcat tttctctata ttttatcctg ccaaatcgcc
     2101 tttaaccctt tttggcagga agcaaaacag ttgtaaaatg ctgattttgc aaactttttc
     2161 caaaaatcaa ccgcttgtaa aaggtggctt tatgtcaaac agaacagaaa taacagacca
     2221 aaatatccga atcccgtttc gctatgctat attgcctgtg attattatgg tatcgattat
     2281 ggcggtggct atcatcaaat ttgaagcctc acctcacgtt ccgttgctta ttggggcaat
     2341 tagtgccgct gtgattgcaa tggcacatgg ctaccgttgg gagacaattg aaaaaggaat
     2401 ttatagaggc attcgtatgg ctttaccagc gattgttatc attattatga ttgggctaac
     2461 catcggagct tggctaggtg gtggaattgt agctacgatg atttactacg gcttgaaatt
     2521 gatctctccg tcgctgtttt tagtaactat ctcaataatt tgtgctattg tgacccttgc
     2581 gattggtagc tcgtggtcta caatgggaac aatcggtgta gcggcgatgg ggatcgggtt
     2641 tagtctcggc attccggcac cgatggttgc cggtgcggtg atctcaggag catatttcgg
     2701 cgataaaatg tcgccactgt cagacactac caatctggca gcagggatta ccgaaaccaa
     2761 tctgtttgaa catatccgcc atatgtttat cactaccgtg ccggcgttcc tgattgcgtt
     2821 atctgtctat ttctattttg gtatggaatt tagagccgaa aatctcgatc ttgctaaaat
     2881 tgaagacatt atgcaggcaa tgcaggaaca tttcttgatt tcgccttggt tgctattagt
     2941 gcctttatta gtcgtggtgt tggtggcaaa aaaagtgcct gccttaccgg cattagctgc
     3001 agggataatt cttggttggc tctgccacgt ttttgtgcaa ggcggtgatg tcagcgtagc
     3061 agtgattact ctgcacgacg gctataaaat tgagagcggc cacgagatga ttgataagct
     3121 gttcaaccgt ggtgggatcg agtcgatgat gtacaccatt tcccttacga ttgttgcgat
     3181 gacttttggt ggcattgcag agcaagctgg aatgttacat tcagtagtgg aaaaaatcct
     3241 tacccttgca aaatcagcag gtagcttaat tagtgctacg attgtatcgg catttattac
     3301 caacgtaacg acatctgagc aatatatttc tattttatta ccaggcagaa tgtatataaa
     3361 agcctatagg gataagggac taagttcgag aaacctttct cgtgcattgg aagacggagg
     3421 aacagttact tcggttcttg taccttggaa tacctgtggt gtttatgcgt tctcaatgtt
     3481 gcaagtgagt gcttttgaat atgcaccgta tgcaataatg aattggctca ttccactgat
     3541 tgcgattggc ttggcaacct tgaatatcaa aattgagcga ttgccaccgg aagaattagc
     3601 caaagaacct gaggaaatta ctctgccaaa acgtggttgt tgtccataat ttatctaaat
     3661 agtatttaat aacaataggt taagttaaat aacaagcggt cggttttatc ttaaaatttg
     3721 caagtttata cataaatttg atcgcttgct gtatagaaag gaaaaatgat gtcataccaa
     3781 cttttaccta acaccactat ccgtcctgaa ttgagccgtc attaccgctt tgatgagcaa
     3841 accctggtgc aaaatctgat agaacaagca cattgtgatg aacaggctga taacattaaa
     3901 aagctcacta cccaattagt cggtaaagtc cgaactgcac gccagaaagc aagcggggtt
     3961 gatgcgttaa tgcacgaatt ttcactctcc agccaagagg gggtggcgtt gatgtgcctt
     4021 gccgaagcat tactacgcat tcctgacacc gccactgcgg ataaattaat tcgagacaaa
     4081 attgccaaag gggattggcg ttcacacacc ggcaacagcc cctctctgtt tgtgaatgca
     4141 gcggcgtggg gcttggtgat taccggcaaa ttggtttcaa cccacagcga aagctcactc
     4201 tcatcagcac tttcacgcct gatcgccaaa ggcggagaac cgctgatccg caaaggtgtg
     4261 gacgtagcaa tgcgtatgct cggcaagaaa tttgtaacgg gcgaaaccat tcaacaggcg
     4321 attaaaaacg gcgaaaaacg cttcgcaatg ggttatcgtt acagctacga tatgctgggc
     4381 gaagcggcac tcaccgccga agatgccaaa cgctattaca acgactatgt tgcctctatt
     4441 cacgctgtgg gtgccacctc gaaaggcttg ggcgtgtata aatcctcggg tgtgtcggtc
     4501 aaactctccg ccattcaccc tcgttattcc ctttcccaac accaacgtgt gatggacgaa
     4561 ctctatccac gtctgaaaga actgttcttg ctggcgaaaa agtatgacat cggcttgaac
     4621 attgatgccg aagaagccga ccgcctcgaa ttgtcgcttg atttgatgga cagactgctt
     4681 gccgaccctg atttggcagg gtttaacggc attggttttg tggtgcaggc gtaccaaaaa
     4741 cgttgcccgt atgtgatcga gcatttaatt gagaccgccc gtaaacataa tcgccagcta
     4801 atgattcgct tggtaaaagg cgcatattgg gacactgaaa tcaagcgggc gcaaatggac
     4861 ggtgcagagg gctatccggt cttctcccgt aaggtgcata ccgatttgaa ctacatcgtt
     4921 tgtgccaaaa aattgctggc ggcgcaagat gtgatctatc cgcaatttgc cacccacaac
     4981 gctcaaactc tcgccaccat ttaccacttg gcacagggca aacgttttga gtttcaatgc
     5041 ttgcacggta tgggagagag cttgtacgac caagtggttg gcagcgataa tcttaacgtg
     5101 caatgtcgca tttatgcccc tgtcggtact tatcaaaccc tgcttgccta tttagtacgt
     5161 cgcttgttgg aaaacggagc gaacagctca tttgttagcc aaattgtgga tgaaaatctc
     5221 agtgtagatg atctggctca agcccctgtt caaaaagcag aactgaccaa tggcactatg
     5281 cacccgaaaa ttccattgcc agtcgattta tttgacgaca atcgtgttaa ttccaaaggc
     5341 tatgatttaa ctgatgcagt aagcctacaa aatttagaaa atgccctcaa tgaacttacc
     5401 aaacagcatt accgtgctga accacagctg gcaaatgata atacaagcgg tcaagaaagc
     5461 cgaaaaattt acaatccagc gaaccaagct gaattagtcg gcgaagtgat tgatgccacc
     5521 gaaaacgata tggaacaggc gtttgaaagt gcggcggcgt tccaaagtga atgggcgaat
     5581 acttcccctg cggtgcgtgc cgagtgctta gaaaaaatgg cggacttgat ggaagccaat
     5641 atgccacaac tgttcgattt ggcggtgcgt gaggcaggca aaacgctcaa caatgcaatt
     5701 gctgaagtgc gtgaagccgt cgatttctgt cgttattatg ccaaagaggt acgcaacaac
     5761 attgaagcat acaaaaatcc gcgtggcatt gtagtagcaa ttagcccgtg gaactttccg
     5821 ttagcgattt ttgtgggtga agtttcatct gcgttggtgg caggcaatgt ggtactagca
     5881 aaaccagctg aacaaacttc gttaatggca cattatgctg tcagcctttt ctaccaagca
     5941 ggtgtgccga aagcggcgtt gcaatgctta ccgggtagag gaaaaacggt tggggtggcg
     6001 ttggtggcag atcatcgtgt gaacggcgtg atttttactg gttcaacaga gacagctaaa
     6061 aacattaacc gcaatttgca caaaaacgag aaaattatac cgcttattgc cgaaactggc
     6121 ggacaaaatg caatgattgt tgatagctcg gcactgggcg agcaggttgt gatagatgtt
     6181 ttaaactccg catttgactc agcagggcaa cgttgttcgg cattgcgtgt gctgtatctg
     6241 caacgtgatg ttgccgatca cattctcaca atgctcaaag gagcaatggc ggagttgaaa
     6301 gttggtcttc cacaacactt aactaccgat gtcggaccag taatcgataa agtcgcacaa
     6361 caacgcttgc tcgatcatat tgaaaatctc aaaaaatcgg cgaaaagtta ctatcaggtg
     6421 gctatctcct ctgaaattgc cgaaaatggt attttcgtac cgccaacgct gttagaaata
     6481 gatcatatca gccagcttaa acacgaagta ttcggaccgg tgctacacgt tatccgtttt
     6541 gatgcggata aactcgacca agtgattgcc gacataaact ccacaggttt cggtctaacc
     6601 agcggtttgc atagccgaat tgatgaaacg gtggatttat ggttgaaatc tgtccacgct
     6661 ggaaatctgt atgtaaaccg taacacggta ggggctgtgg tcggcgtaca gccattcggt
     6721 ggaatggggt tatcaggaac tgggccgaaa gctggcgggc cgctctatct acaacgttta
     6781 gtaaaccgcc aagaatggac attgaacggt ttacagggca atgcacaagc ggtcgatttt
     6841 gacttaaatt ttgcaatccg caaggttcta agtggagctg agcagcaaac ggcgttagat
     6901 ctggccaaaa gccttgcacg ccgctcgcca ctcggaaaaa cctacccaat gcagggtatt
     6961 accggcgaga aaaacgagat gattttcgtg gctcgcccac agattgggat tagcaaaggt
     7021 aatttggctt cacaggtgca agccttgatt gccattgtaa cggtcggcag ccaagcggtg
     7081 gcagaaaaat caagcgagct ggcaaaacac gcctctgcct ttggtaagaa attacaggtg
     7141 gtggatgatt tcaacagtct cgatcacctc agcacactca ttgtgcttga cctgctttct
     7201 agtgaggaaa aattgcatca tgccgaacgc aaaggggcga ttttgaccta catcgaaggg
     7261 ctggatttag cgctctcact gctgccgttg gtacacgaga aagcaatcag catcaacacc
     7321 gctgccgcag ggggaaatgc cagcttaatg agtgaaatgg attaagcaac aaacaaaaga
     7381 gtataagagg gcagatcaca atgatctgcc tttttatttt aaggggctgt cctagataac
     7441 gactaaaact tccatttagg ttaagataac cctatgagaa aaagtcgtct aagtcagtac
     7501 aaacaacata aactcataga gctgtttgta gcaggcgtaa tcgctcgaac agccgcagag
     7561 ttagtgaatg taaataaaac caccgcagcc tattattttc accgtttgcg attgctcatc
     7621 tatcaacata gccctcattt ggaaatgttt gagggagaaa ttgagattga tgagagctat
     7681 ttcggcggtc atcgcaaggg taaacgaggt cgtggtgcag caggcaaaac cgccgtattc
     7741 gggcttttaa agcgtgacgg caaggtttat accgtagtag tgccgaacac acaatctgct
     7801 acacttttgc cgattattcg ggaaaaggtg aagcccgata gccttgttta caccgatttt
     7861 tatcgaagct atgatgtgct tgatgtgagt gaatttaacc attttcgtat caatcacagc
     7921 acacacttcg cagaaaatca aaatcacatt aacggaattg agaatttttg gagtcaagca
     7981 aaacgtcatt tacgcaagtt taatggtatt ccgaaagccc attttgagct atatttgaaa
     8041 gaatgcgaat ggcgttttaa tcacagtgac ttaaaatctc aaatattcct tttaaaacaa
     8101 ttggttaaag gggggttagg ttagttatct aggacagccc ctaaaagtaa tataaccgat
     8161 atttaggcct gacttttcaa ataattgaat atctttattc gcttttaaag cagacaaatc
     8221 tgacgggttc ggataaggca tcgcttggca ttcgttcttc tccaatttag ctaaacgtac
     8281 tgaggcatcg ggcgtaatac taaatacaag gcgatctatc ttcgcttttc cttcccaata
     8341 gtgttcaaat gctgtaaatc ttaccgctgc gtccttttgg taaccataga actggaatgc
     8401 acctgtgcct ataggttcta aatctaattt ttccggcgta cccgctattt gcattttatt
     8461 tgcatattcc gcagaaaaga tcgccataaa atccatagct aaattagcaa gaaagggggc
     8521 attcggttca gataattcga tttttaccgt gtaatcatct acttttgtta catttttgat
     8581 gatgttttgc atattcattc cgtagaaaaa ctcatagtta ccgccggaca atttgtgata
     8641 tggattcgtc ttatcaaact gacggttaat cgaaaaaata acatcatcag cattaaaata
     8701 acgactaggg gtaaaacttt tattactctg gaactgcaca ttctgacgca agaaaaaagt
     8761 ataaattttt ccgccttcac tgatttccca tcgctctgcc agagaaggag tgaggttagt
     8821 ggtacctttt tcaaaatcaa tcaggcgatt atagattgct tgcccgacat caagagtagc
     8881 tccatctgtt gcaatctgag gattcaatgc tgccggagat gattccaaac agtaagtaaa
     8941 agatttaggt gctgcgaaag cagaacctgt aaatgctaaa gaaataagtg caagttgtgt
     9001 cagcttgttc attgtcatat ccttaaatgt taagcaataa aaaacccttt caaaagttgc
     9061 cttccgaaag ggttagaatt gggtttgcga ttttggattg cgtttgccat ttcaggtttt
     9121 cggaagatat cttccgaaca cgccaaatgc ccgaaagatt aatcggtcaa atggtagtga
     9181 tgatgtttaa cgcaatagct cataatattc tccaaaattg aatgtttagg aatttacgct
     9241 ttttaaaaat caattgcaaa cgttttcttt aaaattttgt aaaaaattca acatttttca
     9301 ccgcttgtat cgtacctagg agcaaatggc gatttgctcc taggtttcca agcaataggc
     9361 tattttttct tcgcatattt aagtgagtca atcgctaccg ccaagataat gatgccacct
     9421 ttaataatat attgccagta agggtttact ccaatatagg ttaagccgta gttgataacg
     9481 gtgaagatta acacccctgt tactacaccg atgatagtac ccacaccacc ggcaaaggat
     9541 accccaccta ccacacaagc ggcaatggca tccatttcat acataaagcc taagttgttg
     9601 gttgcactac cgatacgacc tgcttctaac ataccgccga aggcatagaa gatgcctgaa
     9661 agcatataaa tacccatcag gttaagcggt acgtttacac cggaaactcg tgctgcttca
     9721 gggttgccgc caatagcaaa tacgttttta ccgaagcggg ttttattcca taacgtccac
     9781 ataataatgg tagcaatcac ggcataaata gtgatgtagg atagcctaaa gtcgccaaag
     9841 cggaagaagc cttgtgcaaa ggttgagaaa tcatcgctaa agcctgcaat tggcgatgag
     9901 cctactgcat cgtagtaaag cgagttgata ccatacacaa taatcattgt tcccatcgtg
     9961 gcaataaacg gtgttacgtt gaggtaagcc accacaaagc cgttaaataa accaatgaca
    10021 gcaccgatgg cacacacggt taatacaacc acaggaatcg ggatttccga gaggtttggg
    10081 aataccttgt tcatattttc cattgattgg agcaaggtgg cggaaattac cgctgccaag
    10141 cccacttggc gaccggcaga taagtctgtc ccttgtgtta caatcaagcc tgcaacccct
    10201 aatgcaataa tcaaacgcac agaagattgc gataaaatgt tactgaagtt acgcaagctc
    10261 aagaaacttg ggtcttgcac aataatcaca ataagtaaga ttaataatac gaagtaaatc
    10321 gcattttgtt taaaaaaatc gagtgttcta ttttgttgta aagcagacat acttcactcc
    10381 ttgttataaa tattttgctg cgagttgcaa gatttcttct tgcgaggtgt gagcggtttc
    10441 gacaatacct gcaactttcc cgttactcat cactaaaatt cggtctgtga ccccaagcaa
    10501 ttccggcatt tccgatgaaa tcataatgat gcctttatct ttattcgcca gctctaaaat
    10561 caactggtaa atttcaaatt ttgccccgat atcgatacca cgggtcggct cgtcaagcat
    10621 caagatttca ggctgggtta acaaccaacg cccgataatc actttttgtt ggttaccgcc
    10681 ggaaagtgag ccaatatgcg tttgatgcga tggggttttt acattcatcg aatcaattac
    10741 ccattgggta tcgcttttca tttttttatt gctcagtaag ccgaacttgc ctagataaga
    10801 cttcatattt gaaatcagag agttaaactc aatgcttaag ttggcataaa tccctgttga
    10861 acggcgttct tctgtaacca atgcaaagcc gttattaatc gcatcaaaag cgttgcggtt
    10921 attgatttct ttatcgttta gtcggatagt gccgcctgct ttctcccgta caccgaaaat
    10981 ggtttcaaca atatcagtcc gttttgctcc aactaagccg gcgatgccta aaatttcccc
    11041 tctgcgtaag ctaaagctga catcttgaat agagggttga ttttttgccg ttaaatgctc
    11101 aacttcaaga atcacttctt tcggcagatt ggttttttca gggaaacgct gggtcagctc
    11161 acgccctacc atcattgaaa ccacttgatc cattgaggta tctttaattg caacggtgtt
    11221 tacccattta ccgtcacgca aaatggtaat ttcatcacaa attttaaaaa tttcgtccat
    11281 tttgtgtgaa atatagataa tgccacagcc tctgtctttc agtttttgga taattttaaa
    11341 taaatgctcg acttcttttt ctgaaagtga cgaagttggt tcgtccataa tcacaatttt
    11401 ggcattgtaa gagaaagctt ttgcaatctc gatcatctgc atttgtgaaa ccgataattt
    11461 ggctacttta tcacgtggat caacatcaat atctaattca tcaaaaatcg ccttagtatc
    11521 acgatacatt ttatcgtgat ctacaaaagg cccttttagt gggtaacgac ctagccataa
    11581 gttatccatt accgtcactt gttttactag gttcaactct tggtgaacca ttgagatccc
    11641 attttctaac gcctcttttg aggtcttaaa attcaccggc ttgccaagaa agagaatatc
    11701 tccctcatct ttagcataaa tcccaaataa gcatttcagt aacgttgatt tacctgctcc
    11761 attctctccc attaaggcgt gaacactatg ggatttcacc gttaagttag cattatctaa
    11821 ggcttttacc ccgggaaatg acttgctaac atttgtcatt gtgagtaaaa cttcacctgt
    11881 catatctcac ccctgattac atcgaaaaat cgaaaaaaag cacgggtatc catcacccgt
    11941 gctaaaagcg tgaattattt taaaaattca gataagttgt ctttatcgac accaacgtaa
    12001 ggaatacgca ccacacggtt ttccaatttc cattgtgtac cagcaactgc atctttaccg
    12061 tctgctaagt tagcagaaag ctgaacaacc gctttacctt ggtttacacc atcatttaat
    12121 accgtaccgg ctaattcacc ttttttgatt aattgaagtg cttctggcaa tgcatctaca
    12181 ccgaagattg gtaattttct accgtgagct ttggttgctt ctaatgcacc taacgccata
    12241 ccatcattat tagaaataat tacttcgatg tctttcgctt taccacttga taaccaagca
    12301 tccactttat ctttagcttg ggctgcatcc cataatgctg cgtccataaa gatttgctca
    12361 ctgtcgatac cttgtgcttt taagctttct accacatatt tagtacgtgc ttccgcatca
    12421 gggtgacccg gctcaccttt taataaggca aattggattt taccgtcttt attcaagtct
    12481 aattcaggat gggctttcca ctgttttgca attaactcac cttgaataat gcctgactct
    12541 ttcggctcag tacctacata ataagctttc ggatagctat caatcgcagc tgcacccggg
    12601 tctttattga agaacaccac aggcacatct tcactttttg ctttttgaat aattgtttta
    12661 taagctgatg gatccactaa gttaattgct aatgctttaa cccctttaga aagtaataca
    12721 tcaacttggt cgttttgaat agattgcgta ttttgcgagt cattcattaa taactcgact
    12781 ttttgtgttt taccctcttt ttcgatttct ttacgcatta atgccataaa gttatcgtca
    12841 tatttataaa ttgttacacc aatacggttt tcagcttgag ctgtactgat cgttgcacct
    12901 aatgcgactg ccattgccac tgcacttaat actgctttct tcatagtaga tcacctcttt
    12961 tatgtgttta tagggaaatg aattgcttac cataagcaac ttggtgcaaa gtataactaa
    13021 ttttaaaaaa acaatccgtg atcattctca cagaattaag acaaagtgga gaaattttta
    13081 attttaagtt tgacatcctc ccctgcctaa aggcagggga ttcctactag ctcccacagc
    13141 aagctgtggg ctactctcgg tgggtttcta ctgctgatct ctattgagat tcacttcata
    13201 gacgcttcgg gtatgtccta ccctgatatt tattatgctt gg
//
LOCUS       DANLXD010000078        13116 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.078, whole genome shotgun sequence.
ACCESSION   DANLXD010000078 DANLXD010000000
VERSION     DANLXD010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13116)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13116)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13116
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.078"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(427..1467)
                     /locus_tag="PXD18_001832"
     CDS             complement(427..1467)
                     /locus_tag="PXD18_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDL6302238.1"
                     /translation="MKKQLRKNLTQNDRLQPQAQTEIFSFGDPIPVLDRADILNYLEC
                     SAMYEKWYNPPMSFDGLAKSLRSSTHHESAIITKANILLSTCEVDSRYLSRRDLSSFV
                     KDYLVFGNAYFEVVRNRLGQVQRIESPLAKYVRKGLEAGQFYYVPQRFDHQEHEFAKG
                     SIYHLLEPDINQDIYGLPQYLSALQSAWLNESATLFRRKYFLNGAHAGFVFYMSDASQ
                     KQEDVENIRQQLKQSKGVGNFKNLFVHAPNGKKDGIQIIPIADVSAKDEFFNIKNVSR
                     DDVLAAHRVPPQLMGIIPNNTGGFGNVADAAEVFFITEIEPLQERLKEFNQWLGQEVI
                     KFKPSKLLQRTQ"
     gene            complement(1476..3278)
                     /locus_tag="PXD18_001833"
     CDS             complement(1476..3278)
                     /locus_tag="PXD18_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase ATPase subunit family protein"
                     /protein_id="HDL6302239.1"
                     /translation="MENENTITEYEVLAANPLHDKREAQSKYWAGYTVTEISRQLNIP
                     VSTIASWKKREKWDEISPVGRVEATLESRLNLLIMKESKNNNDYKEMDALRRLLESTA
                     RIKKYSNGGGNEADLNPNIKNRNKGDRKKPEQNAISEEQAELLINGFLDGMFHYQKKW
                     HEAGLTHRIRNILKSRQIGATYYFAHEALVDALVTGRNQIFISASKKQALQFRAYIVA
                     YAKRVADVELKGETITLPNESQLIFLGTNSKTAQSYHGNLYFDEIFWVNRFEEIRKVA
                     AGMASQKQYRITYFSTPSSITHSAYLLWSGKLFNRKRPKAEQVEIDISHANLKNGKKC
                     GDGQWRQIVNIYDAEAGGCNLFDIEQLKLENSPDEFEQLFMCEFIDDNQSVFKFTMMQ
                     RCLVDSMEVWRDYVFTDGYQRPFGNKEVWVGYDPSYTGDRSALVVIAPPKVDGGKFRL
                     LEYRTFKGADFAGQAAEIVAICAKYNVTRLAIDTTGLGVGVYEIVKKERPDAVALTYN
                     VELKSKMVLKGLDIISKGRFEFDSMHAVEVGASFMAIKKQITNSGRQVTYVADRSEEA
                     SHADLAWACLQVFINEPFDGKLEETTGTVDFLDD"
     gene            3428..4255
                     /locus_tag="PXD18_001834"
     CDS             3428..4255
                     /locus_tag="PXD18_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HDL6302240.1"
                     /translation="MTTKSKWFVVATEGATTDGREISREWLTQIEENYDPKNNYGARI
                     NLEHFRWRWFEKDDPHSYSYGDVLAVKTEEREDGKLQLLAEIAPTEALVKLVKDKQKV
                     YTSVEIDLNFADTGEAYLVGLAVTDTPASLGTEYLTFCAGATHNPLADRKQKPENLVS
                     EAVEANLEFTAEPEKGAWLEKFKAMFTKAKTDNDGKFAEHEKAMELLAEQFSKVSTEN
                     DRLQTELSTLQIEFTELQKQAGEFAEKFAKLEQEPSANYTPRPKATGAKAGDVQTDF"
     gene            4269..5297
                     /locus_tag="PXD18_001835"
     CDS             4269..5297
                     /locus_tag="PXD18_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HDL6302241.1"
                     /translation="MKDLTLEKYNAYLARQAELNNLPFNALATGIKFTVQPSVQQKLY
                     EKVRESSDFLKSISFVFVDEQTGETLGLDSAHTVASTTDTSGDGERKTTSIAKLVKQT
                     YHCQQINFDTHINYKQLDMWAKFPDFQQKVANVAAKQRKRDLIMIGFNGTSRAATSDR
                     NSNPLLQDVAKGWLQKMREDAKERVMNGESTDNQVLVGKGQEYANLDALVMDATEELI
                     DEWHRDDTDLVVITGRKLLADKYFPIVNQQNAPTEELAADIVISQKRIGGLKAVRVPF
                     FPANAILITKLENLAIYVQEGTTRKHIENVPKKDRIETYESENIDYVVEDYGCAALIE
                     NITLKDKE"
     gene            5307..5996
                     /locus_tag="PXD18_001836"
     CDS             5307..5996
                     /locus_tag="PXD18_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase endonuclease subunit"
                     /protein_id="HDL6302242.1"
                     /translation="MRMSPARAHFLRKTAESESATPNRENLEGLQGYDLVLAQLKAHQ
                     RQLKKIQSIERKIEFKRNNFEQYRPWVEGSLAKGSGVQDTVITTMLIWSIDIGDYPTA
                     LAIAQYVLMHDLAMPEQFERTPATALVEELAEAAKKARDQKQPFEAAVLKQANDLTAE
                     FDMPDPVRAKLLRELGELIQEAEPQTALEHYQRAIALDPQCGAKGLRDKLEKQLAKQA
                     EEPKPAEEQNE"
     gene            6108..6623
                     /locus_tag="PXD18_001837"
     CDS             6108..6623
                     /locus_tag="PXD18_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HDL6302243.1"
                     /translation="MEQRNHVISIPKVNGYESSKNAIKPTAESDETITNNGFFPNIEL
                     LEVRNAMRIDGTVINERLKQAVIEAMATVNADLKAYRLNAEQAQKANLQACDDEQING
                     ESVLVYKYKRAVYCLAVANLYERYRSYDSTKDGHDKAEELESTAGDLKRDYHFAVRDI
                     LGENRMISELI"
     gene            6620..6832
                     /locus_tag="PXD18_001838"
     CDS             6620..6832
                     /locus_tag="PXD18_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HDL6302244.1"
                     /translation="MNTLIARQDDTLDELIFRHYGQTAGLVEQALEYNPELAHLPRLP
                     IGTVVTMPDIESRFATVAKSSVQLWD"
     gene            6838..7044
                     /locus_tag="PXD18_001839"
     CDS             6838..7044
                     /locus_tag="PXD18_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HDL6302245.1"
                     /translation="MHKTEQASYFGAIFGFFGSLTLSDWGVVVSILVAILTLLLNWAY
                     RAKEYKLKEREFELKLQNQGKKNE"
     gene            7037..7603
                     /locus_tag="PXD18_001840"
     CDS             7037..7603
                     /locus_tag="PXD18_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HDL6302246.1"
                     /translation="MSKSVKVGVFVCSVAAIIGTVKQYYSSEIRTSETGLAIIGNAEG
                     CRRDPYKCPADVITVGIGSTEASGEKINVNHKYTDKEIAERWIKDLKIAERCINRYFN
                     GDKMNENQFSAMVSAAFNMGCYNLRFYPNENGKYIQTTIHKYAMAKDFKAMCNRIPDF
                     NRSGGKVLRGLKIRREKEKALCLGQEVK"
     gene            7600..8055
                     /locus_tag="PXD18_001841"
     CDS             7600..8055
                     /locus_tag="PXD18_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302247.1"
                     /translation="MIVKLCQMTNKHFSPLMIVLVLVGVLANFVQFRQNESLKADLQA
                     RTTQNQLIQADNRNLANQLENSQIQLEAYQKQVDDLNQKVLAKMKQAEQRSNEILNEL
                     EKHKKWADSAVPPSVGKLLNQRKRAVSHPQIEPDNLSEKAGVPNTGNRD"
     gene            8204..8425
                     /locus_tag="PXD18_001842"
     CDS             8204..8425
                     /locus_tag="PXD18_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HDL6302248.1"
                     /translation="MSDQIDRANELAEKAREAALAKILQNQTACTSLFECEDCGEPIP
                     EKRREMVIGCTRCIECQTIYEHKQKGYRR"
     gene            8422..8907
                     /locus_tag="PXD18_001843"
     CDS             8422..8907
                     /locus_tag="PXD18_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6302249.1"
                     /translation="MIKPDRLRAVLTQTIDIFQANPEKLILQYDKGKIKSKGSQSHSF
                     EYHYDLELIVVDFPYHPDVLFVPVLNFVRNEQWELLQNPELQDKIEFEIDHNNHESYD
                     IYIRLPLTERVIVKEQDGHLTATHADEPNLADVSPFTRLTEYEVYLKDELIYQWAEPN
                     E"
     gene            8900..9358
                     /locus_tag="PXD18_001844"
     CDS             8900..9358
                     /locus_tag="PXD18_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDL6302250.1"
                     /translation="MSEPIEQVKTAFDSLLNNISKPRRRLMYQQIGRELARSQRRRIK
                     AQQNPDGSAYEPRKKPKKGVKSKIKSGKMFDKITQPRFMRLRLESEGVSLGYEGGDAV
                     IARIHQQGLIGRVRKDWDLKVKYASRELLGFTDDDLQMIEDYMINILAGS"
     gene            complement(9409..9687)
                     /locus_tag="PXD18_001845"
     CDS             complement(9409..9687)
                     /locus_tag="PXD18_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302251.1"
                     /translation="MEILFILLGLIGFGALLAIGFTTFAAIFGVVTTVFLSLLSLLAN
                     MVGLSIIVILISLYVLLPLNTFILIALIFSAILGFLCWYHSDRQSVNQ"
     gene            9726..12638
                     /locus_tag="PXD18_001846"
     CDS             9726..12638
                     /locus_tag="PXD18_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6302252.1"
                     /translation="MSNNLKIQVVLSALDKLTAPFKSVVKQTEKLSQSLKVQRDELKA
                     LEKTQSKMQSFKKMDDSIKKSNETILKQTKHLDNLKNKISQMKNERIELKVKMDAKKR
                     EFQQITKGGSAWSARAAFLDKDFEKMQREYEKLGASISSVSRKRTEENRALKDSRHQQ
                     AKQLLYFRSLRRELRASGINIKAFAQSETNLTDKIAKANQLIDQQKAKLEKLNAVKAR
                     NEKYWATVEKVKNTSERLHNLGQRSMISGAAISAPVVGLGKGVVGMAQTAGKFEQFNA
                     ILEVTEGSAEKAKQSFDWVKQFAVDTPSNLDEAMEAFVKLRAYGLDPTNGLLQTLGDT
                     GAAMGKPVMQAVEAIADALTGENERLKEFGIKGSVVKGTNIIEYAYTDKLGKQQVAKV
                     NKNNRKEIEQTLTRIFNEKYAGAMEKQAKTLVGIWAKIEDYWTNFQMQVMESGAFDWI
                     KNKLQWVLDSLDKMAENGELQKWAEDVGAVIQETVQGLWAFGEKIIEVVKWLASLARE
                     NKGLIATFVKWSAILGSSLTVLGAFAVVASFALYPVARLALGIGKFTGASTLLNKALF
                     DSNDKFRLFNKSLYSSGTTAAFVKSKFNQLATLPNVLGSSFNKLGGGIKMLIPQLKTK
                     VFWLNMLKGILGKLWSAIRFIFSPLKLLLGIFSPIGLAITAISVAGVALYRNWEKVRA
                     FFGGFLQGLSKGLAPVLERFKPLGKLFETISNWVKSTFKWLSDLLTPADKTSESLDKA
                     SSAGEKFGLALAGAIDLVTSPVQWLVDQFKWISENMPSWDTIGEGVKKAATAIVPTEH
                     AKQITKTAEMSNNMYDPNYTPPQLEQKWIGGLVGNGKGRGFATGGYTGNGGKYEPAGI
                     VHKGEYVMTKEATARLGVANLNRLNYGKVAGLTALASSVAFAQPMPAVKIDSRPPLTA
                     SQPSPTVAPVSQNIHITINATGGQDPQAIARLVAMELEKQQRQAQARARSSLRDRG"
     gene            12703..12879
                     /locus_tag="PXD18_001847"
     CDS             12703..12879
                     /locus_tag="PXD18_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302253.1"
                     /translation="MFKEKGYDEFVNECVRKGREEHKAGLGFTLEQSRLHIKKTIEQK
                     SQELNEFQREVVYG"
     gene            12872..>13116
                     /locus_tag="PXD18_001848"
     CDS             12872..>13116
                     /locus_tag="PXD18_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6302254.1"
                     /translation="MAKITIKPQALSQFDEIVKSVIEFTGFETSGIRLQSDIFDKIEQ
                     IAFMPLSGRAREDGTRETFVRRYRIVYDYDRQADEVI"
BASE COUNT         4205 a         2695 c         2901 g         3315 t
ORIGIN      
        1 gcaccaataa tcattattta tcaataagtt aaaatctata atgtgcagta tatgtatatg
       61 caattaaaga ataacgattt ttcctgacaa gcaatatttt tgcgttgagg tgcgtaaaat
      121 tgcgtaaaaa gatcgagttt ttaagatcgc tttgcgatta tatggggctt gtagggatcg
      181 cctttttgca tttgcgtata aatcgacaaa ttaagtgtgc gggcgaggtg agggatagac
      241 cgcgcggggt tggaggtggt gaagtcgttg aaaaataaag gaaaaattat tttttaagtg
      301 tattttattt gttgttttga tataataaat tgccgaaata tataatctaa tcaggcaaaa
      361 cttttgcttt atatattaaa aaagccccaa tctaggagct gtattgtcag tttgtaaaga
      421 tctgttttat tgtgtccgct gtaacaattt agacggttta aatttgataa cctcttgacc
      481 taaccactga ttaaactctt tcaatcgctc ttgcaatggc tcaatctcgg tgataaaaaa
      541 cacctcggca gcatcagcca cgttgccaaa accgccggtg ttatttggga taatccccat
      601 cagttgtggt ggcacacggt gagcagctaa cacatcatca cggctcacgt tcttgatatt
      661 aaaaaactca tcttttgccg acacatcagc aatcggaata atctgtattc catctttctt
      721 gccgtttggt gcgtggacga acaagttttt aaaattcccc accccttttg actgcttgag
      781 ctgctggcga atattttcaa catcttcttg tttttgtgac gcatcgctca tataaaacac
      841 aaagccggcg tgagctccat ttaaaaaata cttacggcga aacagagtag cactctcatt
      901 taaccacgca gattgcaggg ccgaaagata ttgtggcaag ccgtaaatat cttgattaat
      961 atcaggctca agcaagtgat agattgagcc tttggcaaat tcgtgttctt ggtgatcgaa
     1021 tcgttgtggc acatagtaaa attgaccagc ctctaaaccc tttcgcacat attttgccaa
     1081 aggtgattcg attcgctgta cctgcccaag gcgatttcgc accacctcaa aataggcgtt
     1141 gccaaatact aaataatctt taacaaacga tgacaaatca cggcgtgata aataacggct
     1201 atcaacctcg caagtggaaa gcaaaatatt tgctttggtg atgatcgcac tttcgtggtg
     1261 tgttgatgac cttaacgatt tcgccaagcc atcaaagctc atcggtgggt tataccattt
     1321 ctcatacatc gccgaacact ccaaataatt gagaatatcg gcacggtcta acaccggaat
     1381 cgggtcacca aaactgaaaa tttcggtttg tgcttgcggt tgtaagcggt cattttgggt
     1441 taaatttttg cgcaattgtt ttttcatttt ttgtcctaat catctaaaaa atctactgtg
     1501 ccggtcgttt cttccagttt cccatcaaac ggctcattaa taaatacctg caagcaagcc
     1561 cacgcaaggt cggcgtggct tgcctcttcc gaacggtctg ccacataagt cacttgccgt
     1621 ccgctgttgg tgatctgttt tttaattgcc ataaaactcg caccaacctc aacagcgtgc
     1681 attgagtcaa attcaaatcg tcctttgctg ataatatcca agccttttag taccatcttg
     1741 gatttcagct ctacgttgta agtaagagcc accgcatctg gtcgttcttt tttgacgatt
     1801 tcataaacac cgacaccaag ccctgtggta tcaatcgcca gtctggtcac gttatatttt
     1861 gcacaaatag cgacaatttc tgccgcttgt ccggcaaaat cagccccttt aaaagtgcga
     1921 tactctaata gtcggaattt cccgccgtcc actttcggcg gagcgattac caccaacgcc
     1981 gagcggtcgc cggtgtaaga cgggtcatac ccaacccata cctctttatt gccgaatggg
     2041 cgttggtagc cgtccgtgaa tacataatct cgccacacct ccatcgagtc cacaaggcaa
     2101 cgttgcatca tcgtgaactt gaacacagac tggttatcat caataaactc acacataaag
     2161 agctgctcga actcatcggg cgagttttcc agtttgagtt gctcaatatc aaacaggtta
     2221 cagccacctg cctcggcatc gtagatattc acgatttgtc gccattggcc gtctccgcat
     2281 tttttgccgt ttttcaagtt ggcgtgagaa atatcaattt ccacctgttc cgctttcgga
     2341 cgtttgcggt taaacagctt gcccgaccaa agcagatagg cggaatgggt aatgctcgaa
     2401 ggggtagaaa aataagtaat ccgatattgt ttttggctcg ccatacccgc tgccactttg
     2461 cggatttcct caaagcggtt tacccaaaag atttcatcaa aatagagatt gccgtggtaa
     2521 gactgtgccg ttttcgagtt tgtacccaag aaaattagtt gagactcgtt cggcaaggta
     2581 atggtttcgc cttttagctc cacatcggca acccgtttgg cgtatgccac aatataggct
     2641 ctaaattgca atgcctgttt tttcgaggcg gaaataaaaa tctgatttct accggttact
     2701 aacgcatcaa ctaacgcctc gtgagcaaaa taataagtcg ctccaatttg acgactttta
     2761 agaatattgc ggattcgatg agtcagccca gcttcgtgcc attttttctg ataatggaac
     2821 attccgtcta aaaagccgtt tatcaacagt tcggcttgct cttcggaaat ggcattttgc
     2881 tcgggctttt tgcggtcgcc tttattacgg tttttaatat ttgggttgag gtcggcttca
     2941 ttacctccgc cgttagaata ttttttgatt cgtgctgtac tttccaacaa ccgacgtaaa
     3001 gcatccattt ctttgtagtc gttattgttt ttgctctctt tcataatcag caaattcagc
     3061 cgtgattcca gtgtggcttc cacacgtcca acggggctga tttcgtccca tttctctcgc
     3121 tttttccaac ttgcaatggt agagacggga atatttagct gacgagaaat ttcggtcacg
     3181 gtgtaacctg cccaatactt tgattgagcc tctcgtttat cgtgtagagg gttggcagcc
     3241 aacacctcgt attcagtgat tgtattttca ttttccatag gtgcgattat caaaaatcca
     3301 ccttgtttaa gcatttgctt gaggctgtga aacccgattt aacacgtacc acacattgaa
     3361 accgccggca caaaacaaga tcataaatcc gatttttacc cctccccttt agagcaagga
     3421 aaaacagatg acaacaaaat ccaaatggtt tgtggtagca acggaaggag caactacaga
     3481 tggacgcgaa attagtcgtg aatggctcac gcagattgaa gaaaattacg acccgaaaaa
     3541 taactatggt gctcgtatta accttgagca tttccgctgg cgttggtttg agaaagatga
     3601 cccgcattct tacagctatg gcgatgtgtt agcggttaaa acagaagaac gtgaagacgg
     3661 caaattacag ttactggcag aaatcgcccc aaccgaagcc ttagtgaagt tagtcaaaga
     3721 caagcagaaa gtttatacct ctgtggaaat tgaccttaat tttgcggaca caggcgaggc
     3781 gtatttagtt ggtttggcgg tgactgatac accggcaagc ctcggcacgg aatacctcac
     3841 attttgtgcc ggtgcaaccc ataacccact agcagaccgc aagcaaaagc cggaaaacct
     3901 tgtgagtgag gcagtagagg cgaatttaga atttactgct gaacctgaaa aaggtgcgtg
     3961 gctggagaaa tttaaggcga tgtttaccaa agccaaaacc gacaatgacg gcaaatttgc
     4021 cgaacacgaa aaggcaatgg aactgttagc tgagcaattt agcaaagttt cgacagaaaa
     4081 cgaccgcttg caaactgaac taagcacatt gcaaatcgaa tttaccgaat tgcaaaaaca
     4141 agcgggcgaa tttgccgaaa aatttgcaaa actggaacaa gaaccgtctg ccaattacac
     4201 cccacgccca aaagccactg gtgcgaaagc aggtgatgta caaaccgatt tttaattgag
     4261 gatcacgaat gaaagattta acccttgaaa aatataacgc ctaccttgca cgccaagctg
     4321 aattaaacaa cttgccgttt aatgcattgg caaccggcat taaattcaca gtgcaaccat
     4381 cggtacagca aaagctgtat gaaaaggtgc gtgaaagctc tgatttctta aaatctatca
     4441 gctttgtgtt tgttgatgag caaaccggtg aaaccttagg tttagattca gctcacaccg
     4501 tggccagcac caccgatacc agcggtgacg gtgaacgcaa aaccacctct attgcgaagt
     4561 tggtaaaaca aacctaccac tgccaacaaa tcaattttga cacccatatc aattataaac
     4621 agttggatat gtgggcgaaa ttccctgatt ttcagcaaaa agtggcgaat gttgcggcaa
     4681 aacaacgcaa acgtgactta attatgatcg gctttaacgg cacaagtcgt gcggcaacca
     4741 gtgatcgcaa cagcaacccg ttattgcaag atgtggcaaa aggctggttg cagaaaatgc
     4801 gtgaagatgc caaagagcgt gtaatgaatg gcgaaagcac agacaaccaa gttttagtcg
     4861 gcaaaggtca agagtatgcc aatcttgacg cactcgtaat ggacgccacc gaagaactta
     4921 ttgatgaatg gcatcgtgat gacaccgatt tagtggtgat taccggtcgc aagttgcttg
     4981 cggataaata tttcccgatt gtgaatcagc aaaacgcacc aaccgaagaa cttgccgctg
     5041 atattgtgat ctcacaaaaa cgcattgggg gcttaaaagc ggtgcgtgtg ccgttcttcc
     5101 cggcgaatgc gattttaatc actaagctgg aaaatttagc catctatgtg caagagggga
     5161 caacccgcaa gcatattgag aacgtgccga aaaaagaccg tattgaaacc tacgaatcag
     5221 aaaatatcga ctacgttgtc gaagattatg gctgtgcggc attaatcgaa aacattacac
     5281 tcaaagataa agagtaaggt ggaactatgc gaatgagtcc ggctcgggct cattttttgc
     5341 ggaaaaccgc agaaagtgag tctgcaaccc caaaccgaga aaaccttgaa ggcttacaag
     5401 gctatgactt agttttagcc caacttaaag cccatcaacg ccaattaaag aaaatccagt
     5461 cgattgagcg aaagattgag tttaaacgca acaattttga gcaataccga ccttgggtgg
     5521 aaggctccct tgccaaaggc tccggtgtgc aagacacggt tatcaccaca atgctgattt
     5581 ggtcgattga tattggcgat tacccaaccg cccttgcgat tgctcaatac gttttaatgc
     5641 acgatttggc aatgccggag cagtttgaac gcacaccggc aaccgccttg gttgaagagc
     5701 ttgcagaggc ggcaaagaaa gcccgagacc aaaaacagcc gtttgaggca gccgtgctga
     5761 aacaggcaaa cgacctcacc gctgaatttg atatgcccga cccagtgcga gccaaattac
     5821 tgcgtgagct aggcgagcta atccaagagg cagagccaca aaccgccctt gaacactatc
     5881 aaagagcgat agccctcgac cctcaatgcg gtgcaaaagg cttgcgagac aagttagaaa
     5941 agcaacttgc caaacaagcc gaagagccga aaccagcaga agaacagaat gagtaggcga
     6001 aagccgaaat agagcgtatc cacgccagcc aaggggcgga ttttaaaggg tgatttattc
     6061 attttgcacc cttttaaaat ccccacccct taccttacgg aaaccttatg gaacaacgca
     6121 atcacgttat tagtatcccg aaagtgaatg gctatgaatc cagcaaaaat gcgatcaagc
     6181 ccaccgcaga atctgatgaa actatcacca ataatggctt ttttccgaac attgagctac
     6241 tggaggtgcg aaatgcaatg cggattgatg gcacggtcat taatgagcgg ctaaaacaag
     6301 cggtgattga ggcaatggca acagtcaatg ccgacttaaa agcctatcgc ctcaatgcag
     6361 agcaagcaca aaaagcgaac ttgcaagcct gtgatgatga gcaaatcaac ggcgaaagcg
     6421 tgctggttta caaatataaa cgagcggtct attgccttgc agtagcgaac ctttacgaac
     6481 gctaccgcag ttatgacagc accaaagacg gccacgacaa agccgaagag ctagaaagta
     6541 ccgccggtga tttgaaacga gattaccact ttgccgtgcg tgatattttg ggcgaaaacc
     6601 gaatgattag tgaattgata tgaacacctt gattgcacgc caagacgaca ccttagacga
     6661 gctgatcttt cggcactacg ggcaaacggc aggcttagtc gagcaagcct tagaatataa
     6721 ccccgaactg gctcatttgc cacgtttgcc gatcggcact gtagttacaa tgccggatat
     6781 tgagagccgt tttgcaacgg tggcgaaatc cagcgtgcaa ctttgggatt aaaaaatatg
     6841 cacaaaactg aacaagcctc ctattttggg gcaatttttg gcttttttgg tagcctcacc
     6901 ctatctgatt ggggggtggt agtgagtatt ctggtagcta ttttaacctt attacttaat
     6961 tgggcatacc gagccaaaga atacaaactg aaagagcgag aatttgagct aaagctacaa
     7021 aaccaaggga aaaagaatga gtaaaagtgt aaaagttggc gtatttgtct gctccgttgc
     7081 agctattatc gggacggtaa agcaatatta cagctccgaa atccgcacca gcgaaacagg
     7141 cttagccatt atcggcaatg cggagggttg cagacgtgat ccgtataaat gccctgccga
     7201 tgtaatcacg gttggcattg gctcaaccga ggcaagcggt gagaaaatta atgtcaatca
     7261 caaatacacc gataaagaga ttgccgagcg ttggataaaa gatcttaaaa tagctgaaag
     7321 gtgtatcaat cgttatttta atggcgacaa aatgaacgaa aatcagtttt cggcgatggt
     7381 atcagcagca tttaatatgg gatgttacaa ccttagattt tatccaaatg aaaatggtaa
     7441 atacattcag acaacaatcc ataaatatgc tatggctaag gattttaaag cgatgtgtaa
     7501 taggatacct gattttaacc gctcgggagg taaagtgcta agaggtttga aaatccgccg
     7561 agaaaaagaa aaagccctgt gtctcgggca ggaggttaaa tgattgtcaa actctgccaa
     7621 atgaccaata agcatttcag cccgctaatg attgtgctgg tgctagttgg cgtattagcc
     7681 aatttcgtgc agtttcgcca aaacgaaagc ctgaaagcag acttacaggc acgcaccacg
     7741 caaaaccaac tgattcaagc cgataaccgc aatttagcca atcagcttga aaacagccaa
     7801 atacagcttg aggcgtatca aaaacaggtg gacgacctca atcagaaagt gttagccaaa
     7861 atgaaacaag cggagcaacg aagtaatgaa atccttaacg aactggaaaa gcataaaaag
     7921 tgggctgatt ctgccgtgcc tcctagcgtt ggcaagctgc tcaaccaacg aaagcgtgcg
     7981 gtatcacacc ctcaaatcga acccgataat ctgtccgaaa aggctggagt gccaaacacc
     8041 ggcaaccgag attaacacca acggtgatct tgtcaaagca ctagacaaaa gactcaacac
     8101 cattgaggta tgccaagtca tcatcgaatc gttcgagcat tgcatcgagc aatacaacaa
     8161 aatcaaccaa ggcgagtgat cgcctttttt aataaggacg actatgtcag accaaatcga
     8221 ccgagccaac gaattagccg aaaaagccag agaggcggca cttgcaaaaa ttctgcaaaa
     8281 tcagaccgct tgcaccagcc tttttgagtg tgaggattgc ggagagccaa tccccgaaaa
     8341 acgccgagaa atggttattg gttgcacccg ttgcattgag tgccaaacca tttacgagca
     8401 taagcaaaaa ggctaccgca gatgattaaa cctgatcgct tgcgagccgt gctcacacaa
     8461 accattgata tattccaagc taaccccgaa aagctgattt tgcaatatga caaaggcaaa
     8521 attaaaagca aagggagcca aagccattcg tttgaatacc actacgattt agagctaatc
     8581 gtggtggatt ttccgtatca ccccgacgtg ttgtttgtgc cagtgctaaa ttttgtgcga
     8641 aatgaacaat gggagctact gcaaaacccg gaactacaag acaaaatcga atttgaaatc
     8701 gaccacaaca atcacgagag ctacgatatt tatatccgcc tcccgcttac cgagcgggtg
     8761 atcgtgaaag agcaagacgg acacctaact gcaacccacg ccgatgaacc gaaccttgcc
     8821 gatgtttcgc catttacccg tttaaccgaa tatgaggttt acctcaaaga cgagctgatt
     8881 tatcagtggg cagagccaaa tgagtgaacc gatcgaacaa gtaaaaaccg cctttgatag
     8941 cttactgaat aatatcagca aacctcgcag acggttgatg tatcaacaaa tcgggcgaga
     9001 gcttgcccga agccaacgca gacggattaa agcacaacaa aacccagacg gctcggcata
     9061 cgagccacgc aaaaagccga agaaaggggt aaaaagcaaa attaaatcgg gcaagatgtt
     9121 tgacaaaatt acccagccac gttttatgcg gctacgcctt gaaagcgaag gtgtcagctt
     9181 aggttatgag ggtggtgatg cggtcatcgc ccgaatccac caacaaggct taatcggacg
     9241 agtgcggaaa gattgggatt taaaagtgaa atatgccagc cgtgagttgc taggttttac
     9301 tgatgacgat ctgcagatga ttgaggatta tatgattaat attttggctg gtagctaaat
     9361 gatgaataga aacttttgca aaaaagcggt caattttgac cgcttgagtt attgattaac
     9421 gctttgtcta tctgaatgat accaacaaag aaaccctaaa atagctgaaa aaatcaatgc
     9481 tatcaaaata aaagtattga gtggtaacaa tacataaagt gagatcagaa taacgataat
     9541 agagagccca accatatttg ccaataatga aagcaggctt aaaaatactg ttgtaactac
     9601 accaaaaatg gcagcaaagg ttgtaaaacc tattgccaat aatgcaccga aaccaattaa
     9661 cccaagtaag ataaataaga tttccataga ttttccctta gccatactac aattaaggtt
     9721 ataatatgag caataattta aaaattcaag tagttctttc tgcgttagat aaattaaccg
     9781 caccatttaa gagtgtggta aaacagacgg agaaattatc tcaatcttta aaagtacaga
     9841 gagatgaatt aaaagcattg gaaaaaacac aaagtaaaat gcaatcattt aaaaaaatgg
     9901 acgatagcat taagaaatcc aatgaaacta tactcaaaca gacaaagcat ttagataatc
     9961 tcaaaaataa aatcagccaa atgaaaaatg aacgaattga gctgaaagtg aaaatggatg
    10021 cgaaaaaaag ggaatttcaa caaattacga aaggtggttc agcttggagt gcaagagccg
    10081 catttttaga taaagatttt gaaaaaatgc aaagagaata tgaaaaactc ggtgcatcta
    10141 tttcaagtgt cagccgaaaa agaacagaag aaaatcgggc attaaaggat tctcgccatc
    10201 aacaagctaa gcaactttta tattttcgta gtttaagacg tgaattgaga gcaagcggca
    10261 ttaatattaa agcttttgct caaagcgaaa ccaacttaac agacaagatt gcaaaagcaa
    10321 atcaattaat cgaccaacaa aaagcaaaat tagaaaaact aaatgcggtt aaagctcgaa
    10381 atgaaaaata ttgggcaact gtcgaaaagg taaaaaatac cagcgaacgt ttgcataatt
    10441 taggacaacg ctcaatgatt agtggtgcgg caatttctgc ccctgttgtt gggctaggga
    10501 aaggggttgt cggaatggct caaacagcgg gtaaatttga acaatttaat gctattttag
    10561 aggtaaccga gggaagtgct gaaaaagcca agcaaagttt tgattgggtt aaacaatttg
    10621 cagtagatac cccctcaaac cttgatgaag caatggaagc ctttgtaaag ttaagagcat
    10681 acggtcttga tcctaccaat ggcttactac aaacattagg tgatacaggt gctgcaatgg
    10741 gtaagcctgt aatgcaagca gttgaggcaa tagcagatgc tttaacgggt gagaatgaac
    10801 gcttaaaaga atttggtatt aaaggaagtg tagttaaagg tacaaatatt attgagtatg
    10861 cctacactga taaattaggc aaacaacaag tcgcaaaagt aaacaaaaat aaccgaaaag
    10921 aaattgagca aaccctaacc cgtattttta acgaaaaata tgctggagca atggaaaaac
    10981 aagctaaaac gctagttggt atttgggcaa aaattgaaga ttattggaca aatttccaaa
    11041 tgcaagtgat ggaatcggga gcatttgact ggattaaaaa taaattgcaa tgggtgttag
    11101 acagtttaga taaaatggct gaaaatggcg agttgcaaaa atgggctgaa gatgtcggag
    11161 ccgttattca agaaacagta caaggcttat gggcttttgg tgaaaaaatt attgaagtgg
    11221 ttaaatggtt agcgagcttg gcacgggaga ataaagggct aattgcaaca ttcgttaaat
    11281 ggtctgctat tcttggctct agtttaacgg tgctaggagc ttttgcagtg gtggcaagtt
    11341 ttgcattata tcctgtagca agattggctc ttggtatcgg caaatttaca ggtgcaagca
    11401 ccttattaaa taaggcatta tttgatagta atgataaatt ccgattattc aataaatcac
    11461 tttattcatc aggcactacg gctgcttttg ttaaatcaaa atttaatcag ttagcaactt
    11521 taccaaatgt gctgggaagt agttttaata aattaggcgg tggcatcaaa atgctaattc
    11581 cacagcttaa aacaaaagta ttttggctca atatgctaaa aggtatttta ggcaagttgt
    11641 ggagtgcaat ccgttttatt ttctcaccgt tgaaattatt acttggtatt ttctcgccga
    11701 ttggcttagc gattacagct atttcggtag caggggtagc gttatataga aattgggaga
    11761 aggtcagagc cttttttgga ggctttttgc aaggattatc taaaggtctt gcaccagtat
    11821 tagagagatt taaaccttta ggaaaactat ttgaaactat atcaaactgg gttaaatcta
    11881 cgtttaagtg gttatccgat ttattaaccc cagcggataa aacatcggaa agtttagata
    11941 aagcgagttc tgcaggagaa aaattcgggc ttgcattggc tggtgcaata gacttggtaa
    12001 catcacctgt tcagtggcta gtcgatcagt ttaagtggat ttctgaaaat atgccgagtt
    12061 gggacactat tggtgagggt gtaaaaaagg cagctactgc aattgttccc accgagcacg
    12121 ccaagcagat tactaaaacg gcagaaatgt caaacaatat gtatgacccc aattatactc
    12181 caccacaact tgagcaaaaa tggattggtg gcttggttgg taacggtaaa ggaagaggtt
    12241 ttgccacagg cggctacacc ggcaatggtg gcaaatatga gcctgccggt attgtgcata
    12301 agggcgagta tgtaatgacc aaagaggcaa ctgcacgctt gggtgtggca aatcttaacc
    12361 ggttaaatta tggcaaagtt gctgggctaa ctgcacttgc gtcaagtgtt gcgtttgctc
    12421 aaccaatgcc tgcggtcaaa atcgacagca gaccaccgct gacggcaagc caaccaagcc
    12481 caacagttgc accggtgtcg caaaatatcc atatcaccat caacgccacc ggtgggcaag
    12541 acccacaagc aatcgcccga ctggttgcaa tggagttgga aaaacaacaa cgccaagcac
    12601 aagcaagagc aagatcgtct ttgagagaca ggggctaatt tgacaaagta gaatgaaaag
    12661 cggacaatgc tctaaattgt ccgcttttta taggagcaaa tgatgtttaa agaaaaagga
    12721 tatgatgaat ttgtgaatga atgtgtgcga aaaggtagag aagaacacaa agctggttta
    12781 ggatttacgc tagagcaatc tcgcttacat atcaaaaaaa ccattgagca aaaatcacaa
    12841 gagctaaacg aatttcagcg tgaagtggtt tatggctaaa attaccatta aaccacaagc
    12901 attgagtcaa tttgacgaga ttgtaaaaag tgttatcgaa tttaccggtt ttgaaacgag
    12961 tggtattcga ttacaaagtg atatttttga caaaatagag caaattgcat ttatgccact
    13021 ctctggaaga gcaagagaag atgggacaag agaaactttc gtcagacgtt atcgtattgt
    13081 gtacgattac gataggcagg cagatgaagt aattat
//
LOCUS       DANLXD010000079        13006 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.079, whole genome shotgun sequence.
ACCESSION   DANLXD010000079 DANLXD010000000
VERSION     DANLXD010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13006)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13006)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13006
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.079"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            184..561
                     /locus_tag="PXD18_001849"
     CDS             184..561
                     /locus_tag="PXD18_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacL family protein"
                     /protein_id="HDL6302255.1"
                     /translation="MEYQFTHSIHGVVAKCSMDHEAFARWLNAEITENPSQLAPIFAE
                     IEKCRAAFPNHYECVFEGREYSLYFDYDEVMAKANNLDAAFDDEEMEEGFQFYNEESI
                     AFCGLDDFEKFLKAYQHFVQTYH"
     gene            650..1237
                     /gene="yihI"
                     /locus_tag="PXD18_001850"
     CDS             650..1237
                     /gene="yihI"
                     /locus_tag="PXD18_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Der GTPase-activating protein YihI"
                     /protein_id="HDL6302256.1"
                     /translation="MSRTKKTRRITDIMPARKTDKPKQPMPKLGGGKNRKLTRYELDA
                     QAREEKRKRKHKGLPTGSRNADPAEQKKAVVKEVKDPRIGSRKKVPLMVEFVNQPEKG
                     RTIKAVPVEPIKPTLSPEQELEQLENNECLNQLLDDLEAGKTLSAEDQKFMNECLDRI
                     DELMTELGIEYEDEEGDNGDALLRQFETMDINKFR"
     gene            1251..1718
                     /locus_tag="PXD18_001851"
     CDS             1251..1718
                     /locus_tag="PXD18_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2489 domain-containing protein"
                     /protein_id="HDL6302257.1"
                     /translation="MLRIFLMVLAALILISLGGYALHLMLKVRAQKKHEQALIEQAKQ
                     AQKDRYIRILDSIEVIARAMISEQCDFSEGVLRLKPLLDVLGRKLSDYTAMWALYGVV
                     ENMPILDERKNLKRNERMKLDLEREAKEAELESDIKNECYQLLKDIEEMRKAI"
     gene            1718..3085
                     /gene="hemN"
                     /locus_tag="PXD18_001852"
     CDS             1718..3085
                     /gene="hemN"
                     /locus_tag="PXD18_001852"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HDL6302258.1"
                     /translation="MSEIIWDLALIQKYNHSGPRYTSYPTALEFNENYTNEDFIRAAA
                     RYPERPLSLYVHIPFCHKLCYFCGCNKVITRHRHKVEIYLDYLEREIKTRAPLFQNRL
                     VTQIHWGGGTPTYLDEDQSARLMQMLRANFDVSDDAEISIEMDPREIELSMLDHLRAI
                     GFNRLSMGIQDFDKEVQRLVNREQDEEFIFALMKRAKELGFVSTNVDLIYGLPKQNVE
                     SFMYTLKRVVELNPDRMSVFNYAHLPSRFAAQVKIKEELLPAPETKLTILQNSIEFLG
                     KNGYKFIGMDHFAKPDDELAIAQEKGILHRNFQGYTTQEECDLLGMGVSAISLLGDTY
                     AQNRKELQQYYADVETNGIALHKGIALTQDDCIRRDVIKALICNFKLDFATIEKQYGI
                     DFKRYFAEDLAFLAPLAEDELLTMNDDSIVVSPRGRLLIRNICLCFDVYSRQLARRQQ
                     FSRII"
     gene            3159..5492
                     /gene="lptD"
                     /locus_tag="PXD18_001853"
     CDS             3159..5492
                     /gene="lptD"
                     /locus_tag="PXD18_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HDL6302259.1"
                     /translation="MKQRYSLLSLAVMAACYSNSAAADLKQQCLLGVPHFQGEVVEGD
                     QLRMPVTIEADSAVINQPRDATYTGDVTIKQGNRSIWADQVRVEQDGENARMAYLQGN
                     FNYQDNLIQATGSDATINLLSKDANLANANYQLIGRQGRGTAESGEFGNSKHTLKNAS
                     FTSCLPNDNSWQIEANEMIQHVDEEYAEMWHARFKVLGMPVFYSPYLQFPIGDRRRSG
                     LLIPSFERSSKNGWTYSQPFYWNIAPNMDSTITPTYYSRRGWQISPEFRYLTKIGQGL
                     VATEYMAKDRLSEYQPGNDDRKRYLFHWRHAMSFLTDWRFSVDYTKVSDRRYFSDFDS
                     DYGSSTDGYATQNFKLGYYQPNYNISISGKKFQTFDELDIGPYRVLPQIDFNYYKNDL
                     IKGGDFKFFAQAARFENDSKLMPKAWRFHAEPTLNFPLANRYGSLNLETKLYATYYQQ
                     TKGSESTEEIKKSVSRVLPQIKLDFKTVLESDKQLFSGYTQTLEPRVQYIYRPYKDQS
                     DIGSKAHRSVSLGYDSALLQNDYFSLFNDRRYSGLDRISSANLVTAGGTTRFFKEATG
                     EEVFNFSLGQTYYISPSKIDDTSDNSTKGHTTSWAAESNWKFHKNWNWHGSYQYDTRL
                     NQTALANMSLQYKPQSDKLIQLNYRYASKDYINQNLNTNKYGQSIKQVGGVLGWELTD
                     KVSVMTSYYHDLALKKPVEGQISLNYNTCCWAANVYVARRLVSTPVGSSDTINDFYYD
                     NKFGINFELRFGTNYSNGVTRMLKRGIIPYTEPYSIN"
     gene            complement(5634..8273)
                     /gene="ppc"
                     /locus_tag="PXD18_001854"
     CDS             complement(5634..8273)
                     /gene="ppc"
                     /locus_tag="PXD18_001854"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HDL6302260.1"
                     /translation="MNQQYSTIQHNIHMLGEFLGETIRDAQGNYILELIESIRVLSRN
                     SRAGDENAREQLLDKLANISNDDVLPVARAFSHFLNLTNIAEQHQTVSRHHIDESLGS
                     RSLDSLFLRLKSQNIPVEKVIKTVESLMIDLVLTAHPTEVTRRSLGHKHVEINKCLNL
                     LEHDDLTEAESYKIKRRLMQLIALAWHTNEIRTQRPTPVDEAKGGMAVIENSLWKAVP
                     EFCRQLNFYLEKHFGVQYPVNLAPVRFSSWMGGDRDGNPFVTAETTRRVLRMNRWKAT
                     ELFLQDIKNLAEELSITQCTPAFRAKYGNHLEPYRVLLKVLRQKLINTEIYYAELLEG
                     KISTIDESDILTSDQQLWEPLFDCYESLQACGMRIIANGALLDCLRRINCFGLGLSRL
                     DIRQESTRHEMAIAEITRYIGLGDYAHWTEDDKQAFLVRELSSRRPLIPTNWTPSPET
                     KEVLDTCKIVAEQPEGVISAYVISMAREASDVLSVHLLLKEAGCKFTIPVAPLFETLG
                     DLDHSEKVMTDLFNIGWYRGVINNYQMIMIGYSDSAKDAGMLAAGWAQYRAQEALVNL
                     CEKYNIELTLFHGRGGTIGRGGAPAHAALLSQPPRSLKNGLRVTEQGEMIRFKLGLPA
                     VAVESLELYASAILEANIFPPPEPKQQWRDVLAKASDISCQIYRDMVRGELDFVPYFR
                     SATPEQELSRLPLGSRPAKRNPKGGVESLRAIPWIFAWMQNRLMLPAWLGAGQALQQL
                     IDEGNETLLKEMCNEWPFFSTRIGMLEMVFSKADIWLAEYYDQRLVEPKLHRLGNMLR
                     TQLQADLKTVLALAHDGQLMADLPWIAESIALRNIYTDPLNLLQVELLDRIRKQGENA
                     DPVLEQALMITITGIAAGMRNTG"
     gene            8398..9366
                     /locus_tag="PXD18_001855"
     CDS             8398..9366
                     /locus_tag="PXD18_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS1 family transporter"
                     /protein_id="HDL6302261.1"
                     /translation="MCLKLLFGFDNLPVVYVLFTVIQVGLSINGFKGIKWLENVSCVF
                     LIGILAYMLYVVNTKFSVEIGERFANIEGTWGMPFWAATTAFLGIYSTMILNASDYSR
                     HVKKGTTPTATGVIYVLSILPVTLFMGLIGLLVTAATGNSDPIEVFATAMDNKFLTVI
                     TLLFIAFAQVTTNVLNNIVPPSYILMDSFKMKWSHATILVGILSICVMPWKLVTAESA
                     DGLSLFIKIYSAFLGPIFAVMVVDYYILRKRTLNVNDLYNKEGIFKGINWAAIIAIAI
                     GSFCSLIVVDLSWYVSLIPSGLSYYILMRVLKSSEAFRKGTVLEHQ"
     gene            complement(9415..9585)
                     /locus_tag="PXD18_001856"
     CDS             complement(9415..9585)
                     /locus_tag="PXD18_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HDL6302262.1"
                     /translation="MLKCKQITELVSLSQEQKLTLKQRVNVQVHLMLCSRCRAFSQNC
                     KTVDKLMKEFNS"
     gene            complement(9586..10167)
                     /locus_tag="PXD18_001857"
                     /pseudo
     CDS             complement(9586..10167)
                     /locus_tag="PXD18_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252416.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
     gene            complement(10386..11126)
                     /locus_tag="PXD18_001858"
     CDS             complement(10386..11126)
                     /locus_tag="PXD18_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding domain-containing protein"
                     /protein_id="HDL6302263.1"
                     /translation="MPLKLVEEHKPLLKEIQAEFANAIRHNDVKLMSGNISPQRLGVY
                     SRLVRNNTLGFIDRCYVQLPQHLSPEEWVAVKEKFIREGKAHSPFFQDIAGEFLNFCR
                     ENGCMPPHLLELMDFENAQLLAEVSMATVPSEFEWDNDTIMQFSGAAELRQYAVNFIR
                     SEFKQFDFEPTNVLIWRDTEFGIYYNRLEELDFFLLSSLQEGANSLNGLLAELSEFTE
                     QNLELKALLRQLWEKWVEAEVIYPVYPE"
     gene            complement(11116..12039)
                     /locus_tag="PXD18_001859"
     CDS             complement(11116..12039)
                     /locus_tag="PXD18_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HDL6302264.1"
                     /translation="MLKFTGAGLGYRRDLADGFLSLTDNNIINFMEVAPENWLKMGGQ
                     ARYNFDKVAEKIPVIIHGLSLSLGGQAPLDMTLLKGIKNMQQQYNSFFFSDHLSYCEC
                     EGHLYDLLPMPFTDEAVHHVANRIKQVQDYLGMQISLENTSYYLHSPTSTMNEVEFLN
                     AIAQEADCGIHLDVNNIYVNGVNHGLLDPFVFIDQVDKSRVNYIHIAGHDEDHGAAED
                     VKMTEGESFNMVKGELRHLPTLLVDTHGEAVQKTVWDLLEYTYEHLPHIPPTLLERDF
                     NFPPFQELISEVQHIMSLQKKYAKTRLKNAA"
     gene            complement(12140..12427)
                     /locus_tag="PXD18_001860"
     CDS             complement(12140..12427)
                     /locus_tag="PXD18_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302265.1"
                     /translation="MKKATLMALAGALTMATATVNAETKSVKADACMEVKDGKCVKTK
                     ATEGKCGEGKCGATSSEPKATEGKCGEGKCGATAPKAAEGKCGEGKCGASK"
     gene            complement(12453..12893)
                     /locus_tag="PXD18_001861"
     CDS             complement(12453..12893)
                     /locus_tag="PXD18_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDL6302266.1"
                     /translation="MTACKNGLGFLVLRLFLAYEFFEAGLSKLNGENWFASIQESFPF
                     PFNVLPADLSWAIASGAEILLPILLTLGLFTRFSALGLMILTAVAWYAVHAGNGYNVC
                     NNGYKMALIYLVMLVPLLLQGAGSLSLDFLLQKKSPTKRWLKFL"
BASE COUNT         3869 a         2551 c         2738 g         3848 t
ORIGIN      
        1 tggcatagta gttccttttt gatgtatcaa tactaaaaat aacctgtatt attctagcag
       61 atttctgggt aatcgaggag ttgataacat ttaaaaatta gcgttttgca aaattttcca
      121 aaaaaagacc gcttgttagg ctataatagc caaccaaaca gaccaattca aaggagaatc
      181 ggtatggaat atcaatttac ccatagtatt cacggggtgg tggcaaaatg ttcgatggat
      241 cacgaggcgt ttgctcgttg gttgaatgcc gaaataacgg aaaatcctag ccagttagcc
      301 cctattttcg ctgaaataga gaagtgtcga gccgcatttc cgaatcatta tgaatgtgtg
      361 tttgaagggc gggagtatag tctctatttt gattatgatg aagtgatggc aaaagcaaac
      421 aatttagatg ctgcttttga tgatgaggaa atggaagaag gctttcaatt ttacaatgaa
      481 gagagcatcg cattttgtgg cttagatgac tttgagaaat ttttgaaagc ctaccaacat
      541 tttgtgcaaa cttatcattg attgaaatga ttaattgaaa ccaaagctat taagggaatc
      601 taattccttg tagaatagcc gtttatagca attttaagat attaaattta tgagtcgtac
      661 taaaaaaaca cgtcgtatta ccgacattat gccggcaaga aagaccgata aacctaaaca
      721 gcccatgcct aaattaggtg gggggaaaaa tcgcaaactg acccgttatg agttagatgc
      781 tcaagcccgt gaggaaaaac gtaagcgtaa acataaaggc ttgccgacag gctcacgcaa
      841 tgctgatccg gcagagcaga aaaaagcagt ggtgaaagag gtgaaagatc cgcgtatcgg
      901 tagccgtaaa aaagtgccgt taatggtgga atttgtgaac cagccggaaa aagggcggac
      961 gattaaggct gtgccggttg agccaatcaa accaacgctt tcaccggaac aagagctgga
     1021 gcagttagaa aataacgaat gtttaaatca gttgttagat gatttggagg cgggcaaaac
     1081 cttatccgca gaagatcaga aatttatgaa tgaatgttta gatcgcattg atgaattaat
     1141 gactgagctt ggcatcgaat atgaagatga agagggcgat aatggcgatg cgttattacg
     1201 ccaatttgaa acgatggata ttaataaatt ccgctaggta gccgattatg atgctaagaa
     1261 tattcctgat ggtgcttgcc gctttgattt taatttcgct gggcgggtat gcactgcact
     1321 taatgctgaa agtgcgagct cagaaaaagc acgaacaagc actgattgaa caggcaaagc
     1381 aagcacaaaa agatcgttat attcggattt tagacagcat tgaagttatt gctcgggcaa
     1441 tgatttcaga acagtgcgat ttttcggaag gcgttttacg tttaaaaccg ctattagatg
     1501 ttctcggcag aaaattaagc gactatacgg cgatgtgggc gttgtatggc gtggtagaaa
     1561 atatgccgat tttagatgaa cgcaaaaatt taaaacgtaa cgaaagaatg aagttggatt
     1621 tagagcggga agcaaaagaa gcggagcttg aatcagacat caaaaatgag tgttaccaat
     1681 tattaaaaga tattgaagaa atgagaaagg caatctaatg tcagaaatta tttgggattt
     1741 agcccttatt caaaaatata accattcagg gcctcgttat acctcttacc caacagcgtt
     1801 ggagtttaac gaaaattaca ccaatgaaga ttttattcgt gctgcagctc gttaccctga
     1861 gcgtccgctt tcgctttatg tgcatattcc gttttgccat aaactgtgct atttctgtgg
     1921 ctgtaataaa gtgattactc gtcatcgcca taaagttgaa atttatttag attatttaga
     1981 gcgtgaaatt aaaactcgcg cacctctgtt tcaaaatcgt ttagtgaccc aaatacactg
     2041 gggtggcggt acgccgactt atttagacga agatcaatcg gcacgtttaa tgcaaatgct
     2101 acgagccaat tttgatgtga gcgatgatgc ggaaatcagc attgaaatgg atccgcgtga
     2161 aatcgaatta agtatgttgg atcacctgcg tgctatcggt tttaaccgtc tgagtatggg
     2221 tattcaggat ttcgataaag aagtgcaacg tttggtgaat cgtgagcaag atgaagagtt
     2281 tatttttgcc ttgatgaaac gggcaaaaga acttggtttt gtttcaacta atgtggattt
     2341 gatttacggc ttgccaaaac agaatgtgga aagctttatg tacaccttaa aacgtgtggt
     2401 agagctaaac cctgatcgta tgagcgtatt taactatgcc cacttgccaa gccgttttgc
     2461 tgcacaagtg aaaattaaag aagagttgtt gccggctccg gaaaccaaat tgacgatttt
     2521 gcaaaattcc atcgaatttt taggcaaaaa cggttataag tttatcggta tggatcactt
     2581 tgctaaacct gatgatgagt tagctattgc acaagaaaaa ggcattttac accgtaactt
     2641 ccaaggctat accactcaag aagagtgtga tttattggga atgggcgtat cggcaatcag
     2701 cttactcggc gatacttacg cccaaaaccg caaagaatta caacaatact atgctgatgt
     2761 tgaaaccaac ggtattgcgt tgcataaagg cattgcgtta acccaagatg attgcattcg
     2821 ccgtgatgtg ataaaagcct tgatttgtaa tttcaaatta gattttgcca ccattgaaaa
     2881 gcaatatggt attgatttta aacgttattt tgccgaagat ttagctttct tagcgccgtt
     2941 ggcggaagat gaattattaa cgatgaatga cgacagcatt gtggtttccc cacgagggcg
     3001 tttattgatc cgtaatattt gcttatgctt tgatgtctat tcaagacaat tagcgagaag
     3061 acagcagttt tcccgtatta tttaatgagc aagcggtcga ttttggtaaa aattttgcaa
     3121 aaacagaccg cttgttcccg gcttataaag gaaaaatgat gaaacagcgt tatagcttac
     3181 tttctcttgc tgtgatggca gcttgttata gcaacagtgc cgcagctgat ttaaagcaac
     3241 aatgtttact tggcgtgccg cattttcagg gcgaagtggt agagggcgat caacttagaa
     3301 tgcctgttac cattgaggct gacagtgcgg tcattaacca gcctcgtgat gccacctaca
     3361 ccggtgatgt aacgatcaaa caaggtaacc gttcgatttg ggcggatcag gtgcgggttg
     3421 agcaagatgg cgaaaatgcc cgaatggcgt atttgcaggg taattttaac taccaagata
     3481 atttgattca ggcaaccggt tcagatgcga ccatcaatct gctttccaaa gatgcgaatt
     3541 tagctaatgc taattaccaa ttaattggca gacaagggcg tggcacggca gaatccggtg
     3601 aattcggcaa cagcaaacac acgctgaaaa atgccagttt cacttcgtgc ttaccgaatg
     3661 ataattcgtg gcaaattgaa gcgaatgaaa tgattcagca cgttgatgaa gaatatgcgg
     3721 aaatgtggca cgcccgtttt aaagtgctgg gaatgccggt attttattcg ccttacttac
     3781 aatttccgat tggcgaccgc cgccgtagtg ggttattaat tccaagtttt gagcgttcaa
     3841 gcaaaaacgg ctggacatat tcgcaaccgt tttattggaa tatcgcaccg aatatggact
     3901 cgaccatcac tccaacttac tattcacgcc gtggttggca aatcagcccg gaatttcgtt
     3961 atttaacgaa aatcgggcaa ggcttagtgg caaccgaata tatggcgaaa gatcgtttaa
     4021 gcgagtacca accgggaaat gatgatcgta aacgctattt attccactgg cgtcacgcaa
     4081 tgagtttttt aaccgattgg cgtttctcgg tcgattacac caaagtgagc gacagacgtt
     4141 atttctctga ttttgattcg gattatggta gcagtactga tggctatgcg acgcagaatt
     4201 ttaaattagg ctactatcag ccgaattata atatctcaat ttcaggtaaa aaattccaaa
     4261 ccttcgatga gttggatatc gggccttatc gcgttctgcc acaaattgat tttaactatt
     4321 ataaaaacga tctaattaaa ggcggagatt tcaaattctt tgcccaagca gcccgttttg
     4381 aaaatgatag taaattaatg ccaaaagcgt ggcgtttcca cgctgagcca acactgaatt
     4441 tcccattagc gaaccgctat ggtagcttaa atttagaaac caagctctat gcaacctact
     4501 atcaacaaac gaaaggtagt gagagtacgg aagaaattaa gaaaagtgta agtcgtgtac
     4561 tgccacagat taagctcgat tttaaaaccg tgttggaatc cgataaacag cttttctctg
     4621 gctatactca aacgcttgag cctcgggtgc aatatattta tcgcccatat aaggatcaaa
     4681 gcgatattgg ctcgaaagca catcgaagtg tgagcttagg ctatgactct gcattattgc
     4741 aaaacgacta tttctcactg tttaatgaca gacgttatag cggtttagat cgtatttcgt
     4801 cagcaaattt agtcaccgca ggtggcacaa cccgtttctt taaagaggca accggtgaag
     4861 aggtgtttaa tttcagctta ggacaaactt attatataag cccgtctaaa attgatgata
     4921 cctcagataa cagcactaaa ggtcatacga cttcatgggc agcggaatct aactggaaat
     4981 tccataagaa ttggaattgg catggtagct atcaatatga tactcgttta aaccaaacgg
     5041 cgttagcgaa tatgtcattg caatacaaac cacagtcaga caaattgatt cagcttaatt
     5101 accgctatgc aagtaaagat tacatcaatc aaaacttgaa cacgaataag tatgggcaat
     5161 ccattaaaca agtgggcggt gtgctaggtt gggaattaac cgataaagtg tcggtaatga
     5221 ccagttatta ccacgacctt gcattgaaaa aaccggtgga agggcaaatt tcgcttaact
     5281 acaacacttg ctgttgggcg gcaaatgtgt atgtggctcg tcgcttagtt tcaacgccgg
     5341 taggttcatc tgatacgatc aatgatttct actatgacaa taaattcggc attaactttg
     5401 agctacgctt tggcacaaac tacagcaatg gtgtaacccg tatgctaaaa cgaggtatta
     5461 ttccttacac cgagccgtat agcattaatt aacaaagtaa aaacaaataa gtaaaaatac
     5521 aaatcggggc gaaaaatatt tgccccgatt tttttatatt tggctgataa gcggttaaat
     5581 tctgttggaa ttttgcaaat cttccgctaa attcaaccgc ttgccatcga aacttaacct
     5641 gtatttcgca tacctgcggc aatacctgtg atggtgatca tcaatgcttg ctctagtaca
     5701 ggatcagcat tttcaccttg tttgcgaatc ctatctaaca attctacctg aagtagattg
     5761 agcggatcgg tataaatatt gcgtagtgca atcgattctg cgatccaagg taaatcggcc
     5821 attaattgtc catcgtgagc cagtgcaagt acggttttaa gatcagcctg tagttgcgta
     5881 cgcaacatat tgcctaaacg gtgtagtttt ggctcgacta ggcgttggtc gtaatattcc
     5941 gccagccaaa tatcagcttt actaaatacc atttccagca ttccgatacg ggtcgagaaa
     6001 aacggccatt cgttacacat ttcttttagt aaggtttcat taccttcatc aatcaactgt
     6061 tgcaatgctt gccctgcacc taaccaagca ggtagcatta agcggttttg catccaagcg
     6121 aaaatccaag gaattgcacg caaactctcc actccgcctt ttggattacg ttttgcaggg
     6181 cgtgagccaa gcggcagacg ggaaagttct tgctctggtg tagcagagcg gaaatacggt
     6241 acgaagtcta gctcgccacg caccatatca cggtaaattt ggcaagaaat atcggaggct
     6301 tttgctagca catctcgcca ttgctgcttt ggctccggtg gtgggaaaat attcgcttct
     6361 aaaatcgcac tggcatagag ttctaaactt tcaactgcca cggcaggtaa gcctaattta
     6421 aagcggatca tttctccttg ttcggtcact cgtaagccat ttttgagtga gcgaggtggc
     6481 tgagaaagta aggctgcgtg agccggtgcg ccaccacgcc cgatagtacc accacgaccg
     6541 tggaataagg ttaattcaat attatatttt tcacataaat taaccagagc ttcttgcgcc
     6601 cgatattgcg cccagccggc agcaagcatt ccggcatctt tggcggaatc agagtagccg
     6661 atcataatca tttggtaatt gttgatgacg ccacgatacc agccgatatt aaataaatcg
     6721 gtcatcactt tttcactatg atctaaatcg cctagcgttt caaataatgg ggcaaccgga
     6781 atagtaaatt tgcaccccgc ctctttgagt aaaaggtgaa ccgagagtac atcagaggcc
     6841 tctcttgcca ttgaaatgac ataggctgaa atgacacctt caggttgctc ggcaacaatt
     6901 ttacaagtgt ctaacacttc tttagtttca gggcttggag tccagttggt tggaatcaat
     6961 gggcggcgag aactgagttc acgcactaag aatgcctgtt tatcatcttc cgtccagtga
     7021 gcataatcgc ctaagccgat atagcgggta atttctgcaa tcgccatttc gtggcgggta
     7081 ctttcttggc gaatatctaa gcgtgataaa cctaaaccaa aacagtttat acgacgtaag
     7141 caatctagta atgcaccatt tgcaataatt cgcataccac aggcttgtaa tgactcatag
     7201 caatcaaaaa gcggttccca caattgctga tctgaagtta aaatgtcact ttcatcaata
     7261 gttgaaattt taccttccaa taattccgca tagtaaattt cggtattaat taatttctgg
     7321 cgtaatactt ttagtaatac gcgatatggc tctaaatggt tgccatattt agcacgaaat
     7381 gcaggggtac actgtgtaat cgataattct tcagcaagat ttttaatatc ttgtaagaac
     7441 aattccgtgg ctttccaacg gttcattctt aatacacggc gagttgtttc tgccgtgacg
     7501 aacgggttac cgtcacggtc tccgcccatc caagaagaaa aacggacagg ggctaaattt
     7561 accggatatt gcacaccaaa gtgtttttct aaatagaagt taagctgacg gcaaaattcc
     7621 ggcacggctt tccataaact attttcaatg actgccatac cgcctttggc ttcatcaaca
     7681 ggggttgggc gttgggttct gatttcatta gtatgccaag caagggcaat cagttgcatt
     7741 aaacggcgct tgattttata gctttctgcc tcagttaaat catcatgttc caacaaattc
     7801 aaacatttat tgatttcaac gtgtttatgc cccagcgaac ggcgggttac ttccgttggg
     7861 tgagctgtta gcactaaatc aatcattagg ctttccacgg ttttaatcac tttttcaacg
     7921 gggatatttt gtgattttag acgaaggaac agagagtcta atgagcgact accaagtgat
     7981 tcatcaatat gatggcgaga aacagtttga tgttgttcag caatatttgt tagatttaga
     8041 aaatggctaa atgcacgtgc aacgggtaag acatcatcgt tagaaatatt ggctaattta
     8101 tctaatagct gttcacgggc gttttcatcg ccggcacgag aattgcgaga taacacacga
     8161 atgctttcga tgagttctag aatgtaattt ccttgcgcat cacgaatcgt ttctcccaaa
     8221 aattcaccta acatatggat attatgctga attgttgaat attgctggtt cataaaaaat
     8281 tcctatggta aacataaatt aaattaggtc taaatatgcc gaaaatcgct gaaaatagca
     8341 aatagattta atttaatttt tgaattaaat gataaaacgc aaaaaatagc tgtcaatatg
     8401 tgtttaaaac tgttgttcgg ttttgataac ttgcctgttg tttatgtgct attcactgtt
     8461 attcaagttg gcttatccat taatggtttt aaaggtatta aatggttgga aaatgtttct
     8521 tgtgtgttcc tcatcggtat tcttgcttat atgctttatg ttgtgaatac aaaattctct
     8581 gtagaaatag gcgagcgctt tgccaatatt gaaggcactt ggggaatgcc attctgggct
     8641 gcaactacag cattcttggg tatttattca acaatgattt taaatgcttc cgattattct
     8701 cgccacgtta aaaaaggaac aaccccaaca gcaacaggtg tgatttatgt attatcaatc
     8761 ctccctgtaa ccttatttat gggtttaata gggttgttag ttacggcagc tacaggcaat
     8821 agtgacccaa ttgaagtatt tgcaactgca atggataata aatttttaac agtaataacg
     8881 ttattattca ttgcttttgc acaggttacg acaaacgtgt tgaataatat tgttccgcca
     8941 tcttacattt taatggattc atttaaaatg aaatggtcgc atgccaccat tttagtgggc
     9001 attctttcta tatgtgtaat gccttggaaa ttggtaactg ctgaatcagc agatggatta
     9061 tctttgttta ttaaaattta ctcggcattc ttaggcccta tttttgcggt aatggtcgtc
     9121 gattactaca tcttaagaaa acgtacttta aacgtaaatg acttatataa taaagaaggt
     9181 attttcaaag ggattaactg ggcagcaatt attgcgattg ctatcggttc gttttgctca
     9241 ctgattgtgg tggatctctc ttggtatgtc agtttaattc catcaggctt gagctactat
     9301 attttgatga gggtgttaaa aagttccgaa gctttccgta aagggacagt gctagaacat
     9361 caataagatg acaagcggta aaatttatta aaaattttac cgcttgcttt tacgctaaga
     9421 gttaaattct ttcattagct tatctacggt tttgcagttt tggctaaagg ctctgcaacg
     9481 agaacaaagc attaaatgaa cttgcacatt aacacgttgt tttaatgtca gtttttgttc
     9541 ttgggacaga gaaactaatt cggtaatttg cttacatttt aacatttaac ctccaaacca
     9601 tttttgactt aaacagacct gtaactgcaa tcttgcccga tacagtaagg tatgcacatt
     9661 tgctggtgaa atctcacatt ctgcgcaaat ttcttcggtt tccatttcca aatgggaacg
     9721 catcataaac acccttgctt gatttgccgg cagattattt aggcaaaatt caaatacttg
     9781 ccagaattga gcggaatagg tatggctttc ggtgttcttc cactcattag attgataagc
     9841 atctttatcc caaccgccat tttcgttaaa caatttatcg gcaagatcgt gatcgtcttc
     9901 ttccatcagc tcagatactg ccaccaattt gcctttggct ttcactaaat ctacgatctt
     9961 gttttttaaa attgcaaaaa tctacgtttt taacgcactt tcacctttga agctgtcggc
    10021 atatttataa gcgctgacaa acgcctcttg caccacatct tcggcaagtt cgttattttt
    10081 taactgtaaa aaggcaaact tcaccatttg cagacgaata tcttctagct gcgaggggga
    10141 aatttgccgt aaagccggtt ggctcattgc gtgatccttt ggtaaaaaat tgagagaaac
    10201 taaccgcttg tatcctattt cataaggttt tacccaactt aggggatatt ggtatgaagt
    10261 atttttaaac ctaacatact aatcgtaggg gcgggtcctg tgcccgcccg ttatcttaat
    10321 attagtcggg cgggcacagg acccgcccct actatgtatg tcagtacata tcacatacct
    10381 tatcctcatt caggatagac aggataaatc acctctgctt caacccattt ttcccaaagt
    10441 tggcgtaaca aggcttttag ctccagattt tgctcggtaa actcgctgag ttctgctagt
    10501 aagccattca gggaatttgc cccctcttgc aacgagctaa gcaggaagaa atccagctct
    10561 tccaagcggt tgtaatagat gccaaattcc gtatctcgcc aaatcagtac gttggtcggc
    10621 tcaaagtcaa actgtttgaa ctcgctacgg ataaagttta ccgcatattg acgcagctca
    10681 gctgcaccag aaaactgcat tatagtatcg ttatcccatt caaattctga tggtacggtt
    10741 gccattgata cctcagccag taattgagca ttttcaaagt ccatcaactc aagcaagtgt
    10801 ggtggcatac agccattttc tcggcaaaaa ttgagaaatt cgccagcaat atcttggaaa
    10861 aagggcgaat gagccttacc ttctcgtata aatttttctt taacggcaac ccattcttca
    10921 ggacttagat gttgagggag ctgtacataa caacggtcga taaaaccgag agtattattg
    10981 cgaaccaagc gagaatagac gccaagccgc tgtggagaga tattaccact catcagcttt
    11041 acatcgttat ggcgaattgc attcgcaaac tcggcttgaa tctctttgag taacggtttg
    11101 tgttcttcaa cgagtttaag cggcattttt tagcctcgtt tttgcatatt ttttctgtaa
    11161 gctcataatg tgctgtactt cactaatcag ttcttgaaac ggtgggaagt tgaaatcccg
    11221 ttctaacagt gttggtggaa tatgcggtag gtgttcatag gtgtactcta gtaaatccca
    11281 cacagttttt tgtacagctt ctccgtgtgt atcgaccagt aaagttggca gatgacgtag
    11341 ttcgcctttt accatattaa atgattcacc ctcggtcatt ttaacgtctt ccgccgcacc
    11401 gtgatcttca tcgtggcctg caatatgaat ataattgaca cgagatttat ccacttgatc
    11461 aataaataca aatggatcaa gcaagccgtg attgacacca ttaacataaa tattattcac
    11521 atcaaggtga atgccacaat ccgcttcttg ggcaattgca ttgagaaact ctacctcatt
    11581 catcgtactg gttggtgaat gcagatagta ggacgtattt tcaagggaaa tttgcatacc
    11641 taaataatct tgcacttgtt taatgcgatt tgccacgtga tgtacggctt catcggtaaa
    11701 cggcattggc agcaggtcat ataaatgccc ttcacattcg caatagctta aatgatcaga
    11761 gaagaaaaag gagttatact gctgctgcat attcttgatc ccttttagta gcgtcatatc
    11821 taaaggcgct tgcccgccga gagagaggga taaaccgtga ataataacag ggattttttc
    11881 agcgacttta tcgaagttat accgagcctg accgcccatt ttcagccagt tttctggggc
    11941 tacttccata aaattaatta tattgttatc tgtgagagat aaaaatccgt ccgctaggtc
    12001 acggcgatag cctagaccgg caccagtaaa ttttaacatc gtcttgttcc tttaatttgc
    12061 aaaaaatcag cggaatttaa ccgcttgtag attgtgttta taagaggtta ggtgcgttta
    12121 gaaaacgcac cttcgctact tacttagaag ctccacactt gccttcaccg catttacctt
    12181 ctgccgcttt tggtgccgtt gctccacatt tcccttcgcc gcatttacct tcggttgctt
    12241 ttggctcaga agaggttgct ccacatttgc cttcgccaca tttaccttct gtagctttgg
    12301 tttttacaca tttgccatct tttacttcca tacaagcatc tgctttcact gatttagttt
    12361 cagcgtttac agtcgcggtt gccatagtta atgcaccagc taatgccatt aaagttgctt
    12421 ttttcattaa aaattctcca taaattaagg gattaaagga atttcaacca gcgtttggtt
    12481 ggggattttt tctgtaacag aaaatcgaga gagagcgagc cagcaccttg taataaaagt
    12541 ggtactaaca tcactaaata aatgagtgcc attttatagc cattgttgca gacattgtag
    12601 ccattgccag cgtgaacagc ataccacgct accgctgtta agatcattaa tcctaacgca
    12661 ctgaagcggg tgaacagacc caaagtgagt aaaataggca gtaagatttc cgctccgcta
    12721 gcaatagccc agctaagatc ggctggtagt acgttaaagg ggaatgggaa gctctcttga
    12781 attgaggcaa accaattttc accgtttagt tttgataacc ctgcttcaaa aaattcataa
    12841 gcaagaaata gacgtaatac aagaaagccc aagccgtttt tacaagctgt cattgagcaa
    12901 gctgactgag ttgaaaatga tgacgaaaat gatgacataa aaatgctcct aactaaaaat
    12961 gtgattatta gacagaataa gtatacgttt attacaaaaa atgtgt
//
LOCUS       DANLXD010000080        12913 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.080, whole genome shotgun sequence.
ACCESSION   DANLXD010000080 DANLXD010000000
VERSION     DANLXD010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12913)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12913)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12913
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.080"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(123..1115)
                     /gene="mglB"
                     /locus_tag="PXD18_001862"
     CDS             complement(123..1115)
                     /gene="mglB"
                     /locus_tag="PXD18_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HDL6302267.1"
                     /translation="MKRTILSAFALSVICGVNLSYAQSESRVGVTIYKYDDHFMTQMR
                     KDMQNEAKGFAGLKWFMNDAQNSQVKQLAQIETLLQHKMRVLAVNIVNANESKTIVEK
                     AKAYNVPVVFFNRTPSKQALESYEKAYFVSADPKEAGRIQGELIAKVWKSNPDFDLNK
                     DGKLQFVLLKGEPSDVSAERSQAVVESLNQQGVQAEEIYSDTARWRRTLARNKMNEWL
                     VENRAAEIEVVISNNDEMAIGALDALNAHEKRLPIFGIDALPETLALMKKGEIAGTVL
                     NDSSAQAKAVVKLVSNLAQGKPALKDTQWESHSSKTIYLPHIGIDKENLGQFLP"
     gene            complement(1200..1613)
                     /locus_tag="PXD18_001863"
     CDS             complement(1200..1613)
                     /locus_tag="PXD18_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PACE efflux transporter"
                     /protein_id="HDL6302268.1"
                     /translation="MTAWERVFHALLFECFAIIFTVILTSWLTSHRMVDLTAVIVMIS
                     VIAMVWNVIFNWGFDKVFTGERVQRGLGIRILHSFLFEGGLLVFTIPLVMYMLDIGWW
                     QAFVMDIGMTLFVLVYSVVFNWVYDHLRLRWVKSG"
     gene            1733..2020
                     /locus_tag="PXD18_001864"
     CDS             1733..2020
                     /locus_tag="PXD18_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HDL6302269.1"
                     /translation="MKNDKPIECEGCNTFDVGSILDNSETVATIQRTYESENEAKAAL
                     EKFTQKARDVESEPCEISSEITPIESGFELVAHFKFSCQAEVVIFQLGTRF"
     gene            complement(2066..2926)
                     /locus_tag="PXD18_001865"
     CDS             complement(2066..2926)
                     /locus_tag="PXD18_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HDL6302270.1"
                     /translation="MNQSINQSINQSTNQPIVIALAADLGYQTQVETLIKSLCYHHSH
                     LKIYLFQKTFPNEWFDIWCQKLALLSSEIIPVKVCVDFSKYKSLEHINETGFYRYLIP
                     YLDEERVLYLDSDIVVDDNLSEMYWLNFNGIPLYAVEDYVHNHIPAYLDLDLSPYFNS
                     GVLLINNILWKKYSVCDELVTINEKIVNLTYGDQDALNIYFKGGWGALPIEYNYQVDA
                     ILELVLRREQEELARKNGYLDVIPKIIHYTSKFKPWKKELHTMQISTRKKYWFYYHLE
                     WNDILEQHQK"
     gene            3219..4925
                     /locus_tag="PXD18_001866"
     CDS             3219..4925
                     /locus_tag="PXD18_001866"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HDL6302271.1"
                     /translation="MNTSSFNRTWAKVILSALMRYGVKHFCIAPGSRSTPLTLAAVQL
                     QQTQYAECHTHFDERGLGFYALGIAKATDSPVAIIVTSGTAVANLYPAVIEASLSHQK
                     LIILSADRPTELIGCGVNQAIHQQGIFANYPVASVNLPKANEAYHASWLVSTIEQACT
                     TQAQQGGVLHINVPFEEPLYEADINEILNTPWLRPIQGWLNNAQTKWIDQQAIQSEVS
                     MHENWDYWRTKRGVIVVGKLPPEQGTGLKTWAETMGWCLLSDVQSCIEASLPYADIWL
                     SNETVKQRLLQADIVIQFGTQIVSKRVNEFLKAFQGEYWVVEQSHDYHNPNAHHQTRF
                     IAKAHHFLRVHPPLRQKPWLLEPLALSQFCSTFIEQQVGGSLSEASLAHNIQDVLAIN
                     GNLFIGNSLFVRLVDALCKLPEGYPVYTNRGASGIDGLIATMAGIAKGSDRPTVGVVG
                     DISALHDLNSIALLTKINQPTILFVVNNSGGALFDMLPVDSKAKDQYYRLAHNFEFAQ
                     VATMFGLEYIRPFTWADLKTKLKHAYARKGVTIVEIKVNEHDGSNMYKSLLKQISQAE
                     IA"
     gene            4974..5813
                     /gene="menH"
                     /locus_tag="PXD18_001867"
     CDS             4974..5813
                     /gene="menH"
                     /locus_tag="PXD18_001867"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HDL6302272.1"
                     /translation="MLSYQWHAQQGTPVVFLHGLLGSQQDWQAVLQHLQNFPQIRPLT
                     IDLPFHGNSKHITCADFANLRQQLHATLESLIGSRPFYLVGYSLGGRAALDYVLNMEN
                     PNLQGVVLEGANIGLSTENDRQIRRQNDRHWANRFRQEPIEQVLEDWYKQPVFADLSD
                     TERECYIDSRKHNQGEQIAQMLEATSLAKQPDYTEKLKQTDKNIVFFIGEKDQKFRKM
                     ASSHQLPTQLIANAGHNAHRANAKNFVEKLGLLILHSDSDLRSQSVKHNGAALLHKSP
                     SGA"
     gene            complement(5862..6539)
                     /locus_tag="PXD18_001868"
                     /pseudo
     CDS             complement(5862..6539)
                     /locus_tag="PXD18_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251475.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            6625..7287
                     /locus_tag="PXD18_001869"
     CDS             6625..7287
                     /locus_tag="PXD18_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heteromeric transposase endonuclease subunit
                     TnsA"
                     /protein_id="HDL6302273.1"
                     /translation="MRKTHSFQQVRKIKPTWMSVSGHIPFRNGVSIPYESTLERDFLM
                     YFTYLPSVDEVVSQPTTLPFVKNGITYTYTPDFFLSFTDGRKPMLIEVKPKAKWQKHW
                     KEWKEKWKAAIRFCQENGYVFHVYDEDRIRHLALFNLNYVQRYKRIQHEQEDIDAILA
                     QVKLMGNTTIDYLLSRFFAGSLYRMKGLQIIYHLLATKQLHCNWFLPLNEFTEVWGNN
                     DE"
     gene            7277..9205
                     /locus_tag="PXD18_001870"
     CDS             7277..9205
                     /locus_tag="PXD18_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HDL6302274.1"
                     /translation="MMSNSGFTEKRYHHRLDRGRIILQKGNIYLNREDGEQYELVDYM
                     DEPSQLLVRNLNTRTTKVVSIHQLENFKMNERTDLSVDVTAISNEYWEKAQQKYEAIK
                     PLLGMDQHRPYAVKARAEDVGVNPRTLYRWLQAYNSIGSIAGLVDQKRGWQQGNSRLT
                     PEQDKLIVQVINEFYLHKQRPTTEQTIREIRRRCKIEKVESPSKETIRMRILHISEEE
                     RLRKRGQREKARNKFKPKPNSFPDADYPLSVVQIDHTPVDLIIVDSKYRKPIGRPFLT
                     VAIDIYSRMIVGYYLSLDAPSVTSVAMCIARGILPKERLLLDLGLQGSEWNAFGYPVK
                     VHVDNGPDFQALDLSKSCSAHGIHLEFRPMGRPEYGGHIERVIGTFMKEVHSLAGTTF
                     SNIKERDSYDSEKEAIMTLDEFEKWLVHYIVNVYHKRVHSALGISPEQKWKIGIFGDE
                     NEVGCGYPQLPVDEQTLLLDFLPSITRTIQHNGVTIDGLRYYDVALNMYISDSDESGK
                     SKEFLFRRDPRNISKIWFYDPKLKRYFPIPFANQAMPEMSIWEYREVRSRIANKGDKY
                     INEQQVLDGLTEMREMVAESAQRTKKARRQAERQKMHKASKPIIETKVETKAVVPVVV
                     TSNLLALDDESLSFGEVD"
     gene            9205..10092
                     /locus_tag="PXD18_001871"
     CDS             9205..10092
                     /locus_tag="PXD18_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TniB family NTP-binding protein"
                     /protein_id="HDL6302275.1"
                     /translation="MQYEHVHEKFRHLVTADNQERIAFLDEPRWLGYGVAKDIMDNLV
                     SLMNKPKRPRMLNLLIVGDSNNGKTTLIRRFFDLYGQAYIDSDSNAIYPILLAEAPPS
                     ANEKELYISLLERFYVPYKPTDTIAKLRYQTIHLFREFRVKMLVIDEFHSLLVGTPRL
                     QRQVMNAIKMLCNELQIPIVGVGTRDAIRVLHTDRQHASRFDVAELPIWKLDKEFQKL
                     LFQFQGILPLRESSNLQSPELATKIHTISGGNLGNVHRLLTACAVQAITSGTEKITLD
                     IIEKNSWVQPTNGYRKIIG"
     gene            10050..11156
                     /locus_tag="PXD18_001872"
     CDS             10050..11156
                     /locus_tag="PXD18_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TniQ family protein"
                     /protein_id="HDL6302276.1"
                     /translation="MGTTNKRLSQNNRIKKGVIHTPIYSNESISSWLIRASFDCGTDP
                     LTFTGFYWEKHRLWTLDLDRGLENIEPTIYDDVQALSGKIQLSEYSLFRRLYPINADE
                     TLAKGQVRWVIPRSARNRTHHIGQQYCPLCLDESPHLRNDWRLAWNFGCLKHNMMLAN
                     RCFCCGTLYQPHLLSAEKRHLNHCHQCGGKLEQGTMEMSLAEKLTLQGINQVLEKDSG
                     ICFGYKVSGKVWFDMLRYCINLLRRASDRPNHALAKFVVNLQIDVENICSPKTGLSFE
                     QLPLGERTNLLVNAYHILGMEADSIRSAIYLCGGTQKTFMFEKYPDFWQEFMALAPAG
                     PNRTRKRTKPQNESITAINRRWERLKRKLHLNNE"
     gene            11153..12577
                     /locus_tag="PXD18_001873"
     CDS             11153..12577
                     /locus_tag="PXD18_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302277.1"
                     /translation="MKINVIKPQEEPCSACGKISRIWRRYNGEGYCANCYAKWFPKKE
                     CSCCHQPKRIYLSSTVCWDCEKQTDCVRCGKAAGTFKIGKITRYGAVCNVCSRYFREE
                     RECFECGQLSRTMLRASESGHSELLCLKCFQKYRFATCKNCRRYRKVHDRDNQLCRKC
                     SEQRTSQCPKCKQDMPAGYGNICADCSRRTLLFNLIRMNVHLFRHKKVKRAYKKFIFW
                     YLAKCGVSVVLKKSDDHVLFFMRCDENWGNIPDYRELVTFFKPNGLRTHLTVLRWLLD
                     TNQVKVDESLKEEMAGLERIQSLFNKLSNSVPCIANYYTQLQHKYEAGKTSLKSVRLA
                     LQPAIDFISSESVSLLPTQVQLNSYLVAKTGQIAAITGFINHLNREYHCELEIDRSLI
                     QKMKEKQLKQQAKQRLAILYKQEKLSIKEQNELLSVVLLNLHNIWIKSPKKLSISEID
                     GIAYYVDNEKKYFIPKDIHIRLME"
     gene            12692..12898
                     /locus_tag="PXD18_001874"
     CDS             12692..12898
                     /locus_tag="PXD18_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA delta(2)-isopentenylpyrophosphate
                     transferase"
                     /protein_id="HDL6302278.1"
                     /translation="MTLKAQFREWLKKEQEHDEMIGFAHIPCILSKVDSKLAIVSGNA
                     YEKKYLRYWIKCFRFDRNISKYIK"
BASE COUNT         4049 a         2641 c         2595 g         3628 t
ORIGIN      
        1 ttgaatattc gctctattca aatctgttgg aagaaaagag aaaggatttg caagatttta
       61 ctgaaaaatg accgcttgtt atcatcaata aggggcgtat ttataacgcc ccgctcctcc
      121 atttaaggta aaaattgccc taaattttcc ttatcaatac caatatgtgg aagataaatc
      181 gttttagagg aatggctttc ccactgcgta tctttcagcg caggcttacc ttgtgccaaa
      241 ttagatacca atttcaccac cgctttcgct tgtgcagagc tatcatttaa taccgtgccg
      301 gctatttccc cttttttcat taatgctaac gtctcaggca aggcatcaat accaaagatc
      361 ggcaatcttt tctcgtgtgc atttaacgca tctaaagcac caattgccat ttcatcattg
      421 tttgaaatca caacttcaat ctcagctgca cggttttcca ccagccactc attcatttta
      481 ttgcgagcca atgttctacg ccatctcgcc gtgtcactgt aaatttcttc tgcctgaaca
      541 ccttgttgat taagcgattc aaccacagct tgagaacgct cagcgctcac atcactcggc
      601 tcgcccttaa gcaatacaaa ttgcaatttc ccgtctttat ttagatcgaa atcggggttt
      661 gatttccaca ctttcgcaat taattcccct tggattctac cggcctcttt aggatcagcg
      721 ctcacaaagt acgccttttc gtaactttct aacgcttgtt tactcggtgt gcggttaaaa
      781 aagacaaccg gcacattata agccttcgct ttttccacaa tagttttcga ctcatttgca
      841 ttcacaatat tcaccgccaa cacacgcatt ttatgctgaa gtaaggtttc aatttgcgct
      901 aattgcttca cttgggaatt ttgtgcatca ttcataaacc acttcaaccc agcgaagcct
      961 ttcgcctcgt tttgcatatc cttacgcatt tgagtcataa aatggtcatc atatttgtaa
     1021 atcgttaccc ccactctgct ttcagattgt gcgtaactta gattcacacc gcaaataaca
     1081 gaaagtgcaa aagcactcaa gattgtacgc ttcatagaat gtccctcttg ctatgccaaa
     1141 tatgaaccaa ttcaagcata gcgaattttg tgtaaggaaa ccgtgatcta gttcacaatt
     1201 tagccagatt taacccacct caggcgtaaa tgatcgtaca cccaattaaa aactaccgaa
     1261 taaactaata caaataaggt cattccaata tccatcacaa acgcctgcca ccagccgata
     1321 tcgagcatat acattaccaa tgggatagta aaaaccagca aaccgccctc aaaaaggaat
     1381 gaatgcaaaa tacgaatgcc taaaccacgt tgcactcgct caccggtaaa caccttatca
     1441 aaaccccagt taaaaataac attccacacc attgcaatca ccgaaatcat cacaatcact
     1501 gcggttaaat caaccatacg atgagaagtc agccaagaag ttaagataac cgtaaaaata
     1561 atagcgaaac attcaaataa cagcgcgtga aacacacgct cccaagcggt catttttcct
     1621 ccaaactttg caaaatacca actaaatcaa ataatcgttc actgatgatt gcaggttacg
     1681 caatttagtt ttaaagtacc tacattattc atcaatttag aaggattagc caatgaaaaa
     1741 cgataaaccg attgaatgcg aaggctgtaa cacatttgat gtaggttcta ttttagataa
     1801 cagcgaaaca gtcgctacta ttcagcgcac ttatgaaagc gaaaatgaag ctaaagcggc
     1861 acttgaaaaa ttcactcaaa aagcccgtga tgtcgaatct gaaccctgtg aaatcagcag
     1921 tgaaatcacc ccgattgaaa gcggttttga actggttgct cacttcaaat ttagctgcca
     1981 agcagaagtg gttatttttc aattaggaac acgtttctaa tacaaaaagc tgattcaaac
     2041 acttgaatca gcttttgtat gatagctatt tttgatgttg ttccaaaata tcgttccact
     2101 ctaaatgata gtaaaaccaa tattttttac gcgtagatat ttgcattgta tgcagttctt
     2161 ttttccaagg tttgaattta ctcgtatagt ggataatttt cggaatcaca tctaaatagc
     2221 cattttttct cgcaagttcc tcttgttctc ttcttaatac tagttcaaga attgcatcaa
     2281 cttgataatt atactctatc ggcaatgctc cccaaccgcc tttaaagtaa atattgagag
     2341 catcttgatc gccataagtt aagtttacaa ttttttcatt gatagtaacc aactcatcac
     2401 atactgaata cttcttccaa agtatattat taattaatag taccccagaa ttaaaataag
     2461 ggctgaggtc taaatcaaga taagccggta tatgattatg aacataatcc tctactgcat
     2521 ataaaggtat accattaaaa ttaagccagt acatttctga taaattatca tcaaccacaa
     2581 tatctgaatc taaatatagt acacgttctt cgtccagata tggaataagg taacgataaa
     2641 aacccgtttc attaatatgc tctaaactct tatattttga aaaatctaca cagactttca
     2701 caggaataat ttcactcgat aataaggcta atttttggca ccagatatca aaccattcat
     2761 taggaaaagt tttctgaaat agataaatct taagatgaga atgatgataa caaagcgatt
     2821 taattaaggt ttcaacttga gtttgatagc ctaaatcagc tgctaatgca ataactattg
     2881 gttggttggt tgattgattg attgattgat tgattgattg attgattgat tgattggcat
     2941 actattctcc aaaatactta taagtctata aaaaatttac acttgttcta atataatgaa
     3001 taaaattata aactaaaaca caaattcgaa atacgtttct tcgtaaatgc tcttaaaaaa
     3061 gagagagttt actaagtaaa gtgttgctca atagatagaa attttcacga agttttacaa
     3121 aaacattcca attttctcct aaaaaacttc ccacaataat ttcacttttt gctacaatcc
     3181 taaccattta tcgaatttat caatcagtag agaagaatat gaataccagt tcttttaatc
     3241 gcacttgggc aaaagtgatt ttaagtgcat taatgcgtta tggcgtaaaa catttttgta
     3301 ttgctccggg ttctcgctca acaccgctca cattagcggc agtgcaactt caacaaacgc
     3361 aatatgcaga gtgccacact cattttgatg agcgtggttt aggtttttat gcgttaggga
     3421 ttgctaaagc aaccgacagc ccggttgcta ttattgtcac ttccggcaca gcagtagcga
     3481 acctttatcc tgcggtgata gaggcaagcc tgagccacca aaaactgatt attctttctg
     3541 ccgaccgccc aaccgaatta atcggctgtg gggtaaacca agccattcat cagcaaggta
     3601 tttttgccaa ttacccggtt gccagtgtca atctaccgaa agcgaacgag gcttaccacg
     3661 caagctggct ggtttcgacc attgagcaag cctgcactac ccaagcacaa caaggcggtg
     3721 tgttgcatat caatgtgcct tttgaagagc cgctttacga agcagacatt aatgaaattc
     3781 taaatacacc ttggttacgc ccaatccaag gctggttgaa taacgctcaa accaaatgga
     3841 tagaccaaca agcgattcaa agcgaagtct caatgcacga aaattgggat tactggcgaa
     3901 ctaaacgagg ggtgattgtg gtcggcaaac tgccgccgga acaaggcaca ggtttaaaaa
     3961 cttgggcgga aaccatgggt tggtgcttgc taagtgatgt gcaatcttgc attgaagcca
     4021 gcctgccgta tgccgatatt tggctctcca acgagactgt caaacagcgt ttattgcaag
     4081 cggatatcgt gattcaattc ggcacgcaaa ttgtcagcaa acgggtgaat gaatttttaa
     4141 aagcattcca aggggaatat tgggtggtgg aacaatcgca cgattaccat aatccaaacg
     4201 ctcatcatca aacccgtttt attgccaaag cacatcactt tttgcgggta cacccaccac
     4261 ttcgccaaaa gccatggttg cttgagccat tggcattatc gcaattctgc tccactttca
     4321 tagagcaaca agtgggtggc agcttaagtg aagcctcact tgcacacaac attcaagatg
     4381 ttttagcaat taatggcaac ttatttatcg gcaatagctt atttgttcga ttggttgatg
     4441 ctctgtgcaa actgccggaa ggctaccctg tttacaccaa ccgtggtgca agcggtattg
     4501 atggcttaat cgcaacaatg gcaggcattg caaaaggtag cgaccgcccg actgtcggtg
     4561 tggtaggtga tatttccgca ttacacgatc ttaactcaat tgcattgctc accaaaatta
     4621 accagccgac cattttattt gtggtgaata acagcggtgg tgcgttgttt gatatgttgc
     4681 ctgttgatag caaagcgaaa gatcaatatt accgccttgc tcacaacttt gaatttgctc
     4741 aagtcgccac aatgttcggg cttgaatata tccgcccgtt tacttgggca gatctaaaaa
     4801 ccaaactcaa acacgcctat gctcgtaaag gtgttaccat tgtggaaatc aaagtaaatg
     4861 aacacgacgg cagcaatatg tataaatcat tgctaaaaca aatttcacag gcggaaattg
     4921 cctaatcaca actgcccctc gccaatcctg cgaggggtaa aaatgtatcg actatgcttt
     4981 cctatcaatg gcacgctcaa caaggcacac ccgtggtttt ccttcacggc ttgctcggct
     5041 cacaacaaga ctggcaagct gttctccaac atttgcaaaa ttttccgcaa attcgaccgc
     5101 ttaccattga ccttcctttt cacggaaata gtaagcacat tacctgtgcc gattttgcca
     5161 acctgcgaca acaactacac gccacccttg aaagcctaat cggctcacga cctttctatt
     5221 tagtcggcta ctcactcggt ggacgagcgg cactcgatta tgtgttaaat atggagaatc
     5281 cgaatctgca gggcgtggtg ttagaagggg cgaatatcgg cttaagcaca gaaaacgacc
     5341 gccagattcg ccggcaaaat gaccgccatt gggcaaaccg tttccgtcaa gaacccatcg
     5401 aacaagtgct tgaagattgg tacaaacagc ctgtttttgc ggatttaagc gatacggaaa
     5461 gagaatgtta tattgatagc agaaagcaca atcaaggaga gcaaattgct caaatgctgg
     5521 aagccaccag cctcgccaaa cagcctgact acaccgaaaa actcaagcag acggataaga
     5581 atattgtctt ttttatcggt gaaaaggatc agaaatttcg caaaatggca tcaagccacc
     5641 aactaccaac acaactgatt gctaatgcag ggcataacgc tcatcgggct aatgctaaaa
     5701 attttgtgga gaaattgggg ttattgatac tccactccga cagcgaccta cggtcgcaat
     5761 cggttaagca taacggtgca gctctgctgc acaaaagccc cagtggggct taatcagccg
     5821 taggctaaat ataacctagt acggctcagc cgtgctaggt gttagggctc cccctgcaac
     5881 cgttgcaata agcgatccat cgcccgataa ccaagtgctt ccgctaaatg cagttgttga
     5941 atattcgcct cgccggctaa atcagcaata gtccgagaaa ctttcaaaat acggtggtag
     6001 gctcgtaccg ataaaccgag ctttgtcaat gcagtttcta aaaatagggc atcttgtgcc
     6061 gataattggc aatctcgctc aatttctcgg gtggtgagtt gagaattgat tttacctgct
     6121 cgctcaaatt gcatttttct ggctaaaaac actcgcttgc gaacctgctc ggtggtctct
     6181 cctcgattct ccgtcccact ttgcaatgct ccttgtggca aaagtggcac ttctatagag
     6241 agatcgaaac ggtctaagaa aggtccggaa aggcggttta aataccgcat tacctgttgg
     6301 ggcgaagtgc ggttatgcgt gccttgataa tgccctgtcg ggcttgggtt catcgctgca
     6361 attaattgaa agcgtgccgg aaattgtact ttagcgttgg ctcgggaaat cacaatttcg
     6421 cctgcctcca acggctgacg taacgcatca agcactttac gttcaaattc aggcaattca
     6481 tctaagaaca gcacaccgtt atgggcaagt gaaatttccc ccggtttggg gatcgagcca
     6541 ctgtaaaaac tagaaataaa tgtcataaaa actagaaata gctgtcagat tatttagaaa
     6601 acaagaaata ggtgtcaaat tattatgaga aaaacacata gttttcaaca ggttagaaaa
     6661 attaaaccca cttggatgag tgtatcgggg catattccat ttagaaacgg agtcagtatt
     6721 ccctatgaat cgactttaga gcgtgatttt ttgatgtatt tcacttatct accttcagta
     6781 gatgaagtcg tctctcaacc gactacccta cctttcgtca agaatgggat cacttatacc
     6841 tatacaccag atttcttctt gtcatttaca gacggtcgaa agccgatgtt aatcgaggtc
     6901 aaaccgaaag caaaatggca gaagcactgg aaagaatgga aagaaaaatg gaaagctgca
     6961 atacgttttt gccaagaaaa cggttatgta ttccatgtgt atgatgaaga tcggattcga
     7021 catctagcgc ttttcaatct caactatgtt cagcgctata agcgaataca acatgaacaa
     7081 gaagatatag atgctattct agcccaagta aagctgatgg gaaataccac tattgactat
     7141 ttactctctc gattttttgc aggttctcta tatcgcatga aaggcctaca aatcatctat
     7201 cacttactgg caacgaaaca actacattgc aattggtttc taccacttaa tgaatttacc
     7261 gaggtatggg ggaataatga tgagtaactc tggatttaca gaaaagcgct atcatcaccg
     7321 attagatcgg ggacgtatta ttttgcaaaa aggtaatatt tacctaaata gagaagatgg
     7381 agaacagtat gaattggttg attatatgga tgaaccctcc caactgctcg tacgaaatct
     7441 caacactcgt acaaccaaag tcgtcagtat tcatcagctt gaaaatttca aaatgaacga
     7501 gcgaacggat ctttctgtgg atgtaaccgc tattagtaat gaatattggg agaaagccca
     7561 acaaaaatat gaggcaatta aaccgttatt agggatggat caacatcggc cttacgcagt
     7621 taaggctcgt gcagaagatg ttggggtgaa ccctcgtaca ttataccgtt ggttacaagc
     7681 ctataattcc ataggatcta tcgcaggttt agtcgatcaa aaacgtggat ggcaacaagg
     7741 aaattcccgt ttaacgccag agcaagacaa gctgatcgtg caggtaatca atgagtttta
     7801 cctacataaa caacgcccaa ctactgagca aactattaga gaaattcgcc gccgatgcaa
     7861 aattgaaaaa gtggaaagcc caagcaaaga aaccatccgt atgcgcattt tgcatatttc
     7921 agaggaagag cgattacgga aacgcgggca acgagaaaag gcacgcaaca aatttaagcc
     7981 gaagccaaat agctttcctg atgcggatta tccattgagt gtggtacaaa ttgaccatac
     8041 accagttgac ctaattattg tggatagtaa gtatcgtaaa ccgattggcc gaccgttttt
     8101 gacggttgcg atagatatat acagcagaat gattgttggt tattaccttt cacttgatgc
     8161 gccttctgta acttcggtgg cgatgtgtat tgcacgtggt attttgccga aagaacgcct
     8221 actgcttgat ttaggtttgc aaggctcaga atggaatgct tttggctacc cagtgaaagt
     8281 gcatgtggat aatggcccag attttcaggc tttggattta tctaaatctt gttctgcaca
     8341 cggaatccat cttgaattta gaccgatggg gcgacctgaa tatggcggac atattgagcg
     8401 tgttatcggt acatttatga aagaagttca cagtttagca ggaacaacat tctccaacat
     8461 caaagagcgt gactcttacg attcggaaaa agaggccatt atgactctcg atgagtttga
     8521 aaaatggttg gtacattaca ttgtgaatgt ttaccacaaa cgtgtgcatt ctgctttagg
     8581 catttctcct gaacaaaaat ggaagattgg tatttttgga gatgaaaatg aagtgggatg
     8641 tggttatccg caacttcctg ttgatgaaca aacactacta cttgatttct tgccaagtat
     8701 cactcgtacc attcagcata atggtgtaac aattgacgga cttcgttatt acgatgttgc
     8761 gctaaatatg tatatcagtg attcagatga aagcggtaaa tctaaggaat ttctgtttcg
     8821 ccgagacccg cgaaatatca gcaaaatttg gttttatgat ccgaaattaa aacgttactt
     8881 cccaattcca tttgcaaatc aggcaatgcc cgaaatgagc atttgggaat atagagaggt
     8941 tcgtagccga attgcgaata aaggtgataa atatatcaac gagcaacaag ttttagacgg
     9001 tttaaccgag atgcgtgaaa tggttgctga atcggctcaa cggacgaaaa aagcacgccg
     9061 tcaggctgaa cgacaaaaaa tgcacaaagc aagtaagcca attattgaaa caaaagtgga
     9121 aactaaggct gttgtaccag tcgtagtaac atcgaatttg cttgctttag atgatgagag
     9181 cttatctttt ggtgaggtgg actaatgcaa tacgaacatg ttcatgaaaa attccgccat
     9241 cttgtgacag cggacaatca ggagaggatt gcgttcttgg acgagccaag atggttaggt
     9301 tatggtgtcg ccaaagacat tatggataat ttggtttctt taatgaataa accaaaacgc
     9361 ccacgaatgt tgaatttgtt gattgtcggc gattccaata atggaaaaac cacactgatc
     9421 cgccgcttct tcgacttgta cggtcaggcg tatatcgaca gtgattctaa tgcgatttac
     9481 cctattcttc ttgccgaagc cccaccaagt gcgaatgaaa aagaattgta catctcatta
     9541 ttagagcggt tctacgtacc atataagccg acagatacga tagccaaact tcgttatcag
     9601 actatccatt tgttccgaga atttcgtgtc aaaatgttgg ttattgacga gtttcattct
     9661 ctgttggttg gtacaccacg cttacaacga caggtgatga acgcaattaa gatgctttgt
     9721 aacgagctac aaattccaat tgtcggtgtt ggtactcgtg atgcaattcg ggtattacat
     9781 acggatcgac aacatgccag tcgttttgat gttgcggaat tgccaatatg gaaactagat
     9841 aaggaatttc aaaaactcct atttcaattc caagggattt tacctttgag ggagagttca
     9901 aatctgcaat ctccagaact tgctacgaag atccacacca tttcaggtgg gaacttaggg
     9961 aacgtgcatc gcttactaac agcttgtgca gttcaagcca ttacaagtgg cacggaaaaa
    10021 atcaccttag acatcattga gaaaaattca tgggtacaac caacaaacgg ctatcgcaaa
    10081 ataatcggat aaaaaaaggt gttattcata cccctattta ttcaaatgaa agtattagct
    10141 cgtggttaat tcgtgcatcc tttgattgtg gtacagatcc actgactttt acagggtttt
    10201 attgggaaaa acatcggttg tggacattag atttagatcg tggcttggaa aatattgagc
    10261 caactatcta tgatgatgta caggcattat cgggtaaaat ccaactttca gaatattcct
    10321 tgtttcgcag gctttaccct ataaatgcag atgaaacctt agctaaaggt caagtaagat
    10381 gggtgattcc acgttcggca aggaatagaa cccatcacat tggtcaacaa tattgtcctt
    10441 tgtgcttgga tgagtcgcca catttacgca atgattggcg gttagcgtgg aattttggtt
    10501 gtctcaagca taatatgatg ttggcgaaca gatgtttttg ttgtggtaca ttgtatcaac
    10561 cccatttact atcagcggaa aagaggcatt tgaatcattg tcatcaatgt ggtgggaaac
    10621 tggaacaagg cacaatggaa atgagtctag ctgaaaagct gacattgcaa ggtattaatc
    10681 aggtactcga aaaagattca ggcatctgtt ttggatacaa ggtgtcgggt aaggtgtggt
    10741 ttgatatgct ccgctactgc atcaacttat tgagacgtgc atcagacaga ccaaatcatg
    10801 ccttagcaaa atttgtagtt aatctacaga ttgatgttga aaatatatgt agccccaaaa
    10861 caggactttc ttttgaacaa cttccgctag gtgaacgtac aaatttactt gtgaatgcct
    10921 atcatatttt gggaatggaa gcagattcta ttcgtagtgc aatttatttg tgtggcggaa
    10981 cacaaaaaac ctttatgttt gaaaaatatc ctgatttttg gcaagaattt atggcactag
    11041 cacccgcagg cccaaataga acacgaaaac gcaccaagcc ccaaaatgag tctatcacag
    11101 caattaatcg ccgttgggag cgtttgaaac gcaaactaca cttaaataac gaatgaaaat
    11161 taatgtaata aaaccacagg aagaaccttg ctccgcttgt ggcaaaattt ctcgcatttg
    11221 gcgcagatat aatggcgaag gctactgtgc caattgctat gctaagtggt ttccgaaaaa
    11281 agagtgcagc tgttgccatc aaccaaagcg tatctatttg agttcaacag tatgttggga
    11341 ttgcgaaaaa cagactgact gtgtacgttg cggtaaggct gcgggtacat tcaaaattgg
    11401 taaaattacc cgttatggtg cagtttgtaa tgtgtgttca cgttattttc gtgaagaacg
    11461 agaatgtttt gagtgtggtc aactatctag aactatgctt cgagcatcag agtcaggtca
    11521 tagcgagcta ctctgcttga agtgttttca aaaatatcgg tttgcgactt gtaaaaactg
    11581 tcgccgttat cgcaaagttc atgaccgtga taatcagctt tgtcgaaaat gtagtgagca
    11641 acgaacttca caatgcccga agtgcaaaca ggatatgcct gcgggatatg gtaatatttg
    11701 tgcagattgt tctaggcgaa ctctactgtt caaccttatt cgaatgaatg tgcatttatt
    11761 ccgccacaaa aaagtgaaaa gagcatataa aaagttcatt ttttggtatc tcgcaaagtg
    11821 tggcgtgagt gttgtgctga aaaaatcaga cgaccacgtc ctctttttta tgcgttgcga
    11881 tgaaaattgg ggcaacattc cagactaccg tgagttggtt acattcttta aacccaatgg
    11941 attacggacg catttgactg tgttgcgttg gttgcttgat accaatcaag tcaaagtaga
    12001 tgagagctta aaagaggaaa tggcggggtt ggaacgtatt caatccctat ttaacaaatt
    12061 aagtaactct gtaccttgta ttgcaaacta ctacacgcag ttacaacata aatatgaggc
    12121 gggcaaaaca tcactgaaat ctgttcgatt agctttacaa cctgcgattg atttcatcag
    12181 ttcagaatct gtctcgttac tgccgactca agtacaactg aatagctatc ttgtggcaaa
    12241 aacgggacag attgctgcta ttacaggctt tataaaccac ctgaaccgag aatatcattg
    12301 tgaattagaa attgaccgct ccctcattca aaagatgaaa gaaaagcagt tgaagcagca
    12361 agcaaaacag cgattagcga tactctacaa gcaagaaaaa ctaagtatca aagagcaaaa
    12421 tgagctactc tcagtcgtat tactgaattt gcacaacatt tggataaaat caccgaaaaa
    12481 attaagtatt tcagagatag acggtatagc ctactatgtt gataatgaga aaaaatactt
    12541 tataccaaaa gacattcaca tacgcctgat ggaataagct gtcgtcaatt tttatttttg
    12601 cgatctgtgt cgagaaaata atatttatga atcgacagat gaaataatat tgataaagtc
    12661 tctttgtgtg ttcaacaaac aggagataaa tatgacatta aaggctcaat ttcgtgaatg
    12721 gcttaaaaaa gagcaagaac atgatgaaat gatagggttc gcccatatcc cttgcatttt
    12781 atctaaagtg gatagcaaac tggcgattgt tagcggaaat gcttatgaga agaaatatct
    12841 cagatattgg atcaagtgtt ttaggttcga tagaaatatc agcaagtata ttaaataggt
    12901 taaatatcta gct
//
LOCUS       DANLXD010000081        12021 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.081, whole genome shotgun sequence.
ACCESSION   DANLXD010000081 DANLXD010000000
VERSION     DANLXD010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12021)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12021)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12021
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.081"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(6..82)
                     /locus_tag="PXD18_001875"
     tRNA            complement(6..82)
                     /locus_tag="PXD18_001875"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(46..48),aa:Pro,seq:tgg)
     gene            complement(107..182)
                     /locus_tag="PXD18_001876"
     tRNA            complement(107..182)
                     /locus_tag="PXD18_001876"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(147..149),aa:His,seq:gtg)
     gene            complement(212..288)
                     /locus_tag="PXD18_001877"
     tRNA            complement(212..288)
                     /locus_tag="PXD18_001877"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(252..254),aa:Arg,seq:ccg)
     gene            complement(447..1169)
                     /gene="rffM"
                     /locus_tag="PXD18_001878"
     CDS             complement(447..1169)
                     /gene="rffM"
                     /locus_tag="PXD18_001878"
                     /EC_number="2.4.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     N-acetylmannosaminouronosyltransferase"
                     /protein_id="HDL6302279.1"
                     /translation="MFDKVIIRGIALQAVKNREIFANWLMNEKRIQFGRLVAINAEKV
                     ILSEKNPLLRRVIDEAEFNYADGISVVQSIRKKYPNYKIERIAGADLWETLMQRAGAL
                     NVPVFLVGSSADTLTKVEAKLAQWKVNIVGRQNGYFKAEQEQDVIEQIKASGAKFISV
                     AMGTPKQELFIQQLQQQYPQALYMGVGGTYDVFAGKVKRAPKIWQNLGLEWLYRLLKQ
                     PTRWQRQLNLLKYAYYYLTNQL"
     gene            complement(1159..2430)
                     /locus_tag="PXD18_001879"
     CDS             complement(1159..2430)
                     /locus_tag="PXD18_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WzyE family oligosaccharide polymerase"
                     /protein_id="HDL6302280.1"
                     /translation="MNNLIPLGGFYLVSVGLFFSLLYQLYQKSGISFHLLFSLLYFVT
                     FYAGFPFSLIMAFGFDYPLPELKTQWQVFTAAGVGYLIYYVVYSRLWSAVSQPTALVA
                     NFQAKTTACILAAVAVVALLYFLYLNGFLLFKLEKYSQLFAKDRVILSALKRFFYFLL
                     PALLIFCFLYKNKTAWWALLIVGGAFGILSYVAVGGTWANLALAVGFFLLIGLQQGYL
                     SLSKVIAVSLIGVVAMFFLALARYKLTLSGSEMIYTFLYLSRDTFSPWENLARVFSNE
                     VEYQGLMPIVRDFYVYIPQSLWQERPEIVWNTANYFTKVILGNQSGLAISPTLLGSFY
                     IMGGFSVMALGMGIVAAMIKALDNLFAYAKACNSALLQAYCFGNLFNLIVLVREGIDA
                     FVSRFCFFTLIFMACYLLAKILSMGKNNNVR"
     gene            complement(2423..3493)
                     /locus_tag="PXD18_001880"
     CDS             complement(2423..3493)
                     /locus_tag="PXD18_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDP-N-acetylfucosamine:lipid II
                     N-acetylfucosaminyltransferase"
                     /protein_id="HDL6302281.1"
                     /translation="MLPIYHILGSEIEHHNQQVLTFFQQELLPLLPDSEHFFYVVGKP
                     SLQTAFPHLRIKQFSSQKAIANALIAKKRQNPTACFLLHGQFNPWIWLAIALGRLPTT
                     NLIWHIWGADLYEMATSWKFKLFYPFRRVAQQKILQVWATRGDLDHLWRNMRTRSEQD
                     HLIYFPTKLGDQIKISPTQNDRLTILLGNSGDPANELIQALSEIHQRLGNNVRIIIPM
                     GYPENNESYIRQVEAYSKRLFLAENLQILRKKLSFEEYVTLLSHCDLGYFNFKRQQGI
                     GTISLLISHNVPCVLHSANPFGLDLQAEKVPYLLAENLTASQIQTTKQQLKSIDKNRI
                     AFFAPGYTKLWQQRLIELMQNE"
     gene            3680..5101
                     /gene="glnA"
                     /locus_tag="PXD18_001881"
     CDS             3680..5101
                     /gene="glnA"
                     /locus_tag="PXD18_001881"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011298219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HDL6302282.1"
                     /translation="MSNAIANVSKLIQDNDIKFVLLKFTDIKGKEHGVSLPVSLVAND
                     LEDLFEEGKMFDGSSVEGWKAINKADMLLMPIAETAVVDPFARIPTLSIRCSIYDPNT
                     MQSYDRDPRSIATRAENYLKSTGIADSVMFGPEPEFFLFDDVRFSTEMNNVSYRIDDV
                     EAAWNTNRKFEEGNKAYRPLKKGGYCAVAPIDTAHDIRSEMCLLMEEMGLVIEAHHHE
                     VATAGQNEIATRFNSLTLKADETQIYKYIVQNVAVEHGKTACFMPKPFAGDNGSGMHC
                     NMSLSKDGKNVFMGDKYAGLSETALYYIGGIIKHAKALNAFTNPTTNSYKRLVPGFEA
                     PVLLAYSASNRSASIRIPAVTSPKATRVEARFPDPMANPYLCFAALLMAGLDGVINKI
                     HPGDAMDKNLYDLPPEELKDIPTVASSLESALDALSNDFEFLTQGGVFTKDFIDAYIG
                     IRRKEVERVNMTPHPVEFELYYS"
     gene            complement(5145..6288)
                     /gene="rffA"
                     /locus_tag="PXD18_001882"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /pseudo
     CDS             complement(5145..6288)
                     /gene="rffA"
                     /locus_tag="PXD18_001882"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251256.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxygalactose transaminase"
     gene            complement(6275..6919)
                     /gene="rffC"
                     /locus_tag="PXD18_001883"
                     /gene_synonym="wecD"
     CDS             complement(6275..6919)
                     /gene="rffC"
                     /locus_tag="PXD18_001883"
                     /gene_synonym="wecD"
                     /EC_number="2.3.1.210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxy-D-galactose
                     acyltransferase"
                     /protein_id="HDL6302283.1"
                     /translation="MKPDQWLSDFFGREIVQVKVAADDFRQIARLQKQGFVLVEGELE
                     FELALATFSENMTACRPADMADLPDLNLLFGSAFPDSRFRSPYFSREENQRFYRTWIE
                     NAVKGKFDDIGLVQCNADGQIQGAVTVRLLAQQQAKIGLLAVKPDCRQQGIGSELLNA
                     AIAWAKQQNAKKLMITTQLSNQKAIRFYQAFGASIKAVYYWFYPALEKYDDEQS"
     gene            complement(6916..8163)
                     /gene="wecC"
                     /locus_tag="PXD18_001884"
     CDS             complement(6916..8163)
                     /gene="wecC"
                     /locus_tag="PXD18_001884"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HDL6302284.1"
                     /translation="MMSKTEFNTICILGLGYIGLPTSVVFANAGKQVIGVDINPQVVA
                     SLNQGNIHIIEPDLQTAFTQAVKKGNFFATAKPQPADAFIIAVPTPLCGKQPDLTYIQ
                     NAAAMIAPCLRKGNLVVLESTSPVGTTENLAEWLSQARPDLAFPADVSIAYCPERVLP
                     GNIMTELVENDRIIGGLSEQCGQQAVDLYQIFAKGRCVTTTARTAEMCKLVENSFRDV
                     NIAFANEISMICDALKINVWELIELANLHPRVNILQPGAGVGGHCLAVDPWFIVSTSP
                     QQARLIRTAREVNDSKPQWVIEQVKTSVADCAMEQDCKPSELTIACLGLAFKPNIDDL
                     RESPALAITRQLAAWHQGSLLAVEPNIQQLAGEKITLVDLNTALSQADILVLLVDHTS
                     FKQISREQIRQRHIIDCRGVWVR"
     gene            complement(8204..9016)
                     /locus_tag="PXD18_001885"
     CDS             complement(8204..9016)
                     /locus_tag="PXD18_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS chain length-determining protein"
                     /protein_id="HDL6302285.1"
                     /translation="MKTLFYRLLVLILFAAIGAGAGYGLSYTQPEKWKVTAQFEQPTI
                     PDLGNYYSLLSTYHFLNSNSQEANSQTAQQQASEQVYAEFKRNLTSADLLQAYLLQTE
                     AVKLKAQVAKKSPAVVAAELVEQFRFEKDMATSADNVSLIAENAEEAQKLLADFIPLV
                     NTQARDKLNADLIAKWKVLFQQIKTASELNINGKQGSQDWAAKLQMMRSVQPLDNQLT
                     AYRLVKSPSVPLKSESPDPPILADDWGIKWLTAGLYAQFCGESESSTCGTLI"
     gene            complement(9027..10091)
                     /gene="wecA"
                     /locus_tag="PXD18_001886"
     CDS             complement(9027..10091)
                     /gene="wecA"
                     /locus_tag="PXD18_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--undecaprenyl-phosphate
                     N-acetylglucosaminephosphotransferase"
                     /protein_id="HDL6302286.1"
                     /translation="MWLTFLTVFIVSFLALIVMRPVAEFVGLVDKPNFRKRHQGLIPL
                     IGGIALFIGNLTFYFMQWQDMRLPELYLTAVTILLIIGVLDDRFDISPLLRAGIQAAL
                     AGAMIYSGLSLSSLGQIIAPFSIELGWLGIVFTVFITIGVINAFNMVDGIDGLLAGLS
                     SVSFAGLGTLMFINGEPSLGYWCFALIFVLLPYAMFNLSLFGAKWKVFMGDSGSMLIG
                     FTIIWILLLSTQGQGSPISPITGLWLIAVPLIDMVAVIIRRLKKGKSPFKPDRLHLHH
                     LMMRAGLTSRQALLVITLWAGFCSTIGVLGEVYYWNQWVMMLMFIGLFFLYAYSITHA
                     WRVTRFVRRLKRRAKRSKQL"
     gene            10233..11513
                     /gene="hemL"
                     /locus_tag="PXD18_001887"
     CDS             10233..11513
                     /gene="hemL"
                     /locus_tag="PXD18_001887"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDL6302287.1"
                     /translation="MSISEQLFEQAQKVIPGGVNSPVRAFKGVGGTPVFIEKAEGAYI
                     TDSDGKQYIDYVGSWGPMVLGHNHPAIIDAVLKAVPKGLSFGAPTAAEITLAELVCKL
                     VPSIEMVRMVSSGTEATMSAIRLARGYTNRDKIIKFEGCYHGHSDSLLVKAGSGALTL
                     GQPSGPGVPADFAKHTLTCTYNDLDSVKAAFEQYPNEIACLIVEPVAGNMNCIPPQEG
                     FLQGLRDLCTQYGAVFIIDEVMTGFRVALGGAQSYYGVTPDLTTLGKIIGGGMPVGAF
                     GGKKEIMEYIAPTGPVYQAGTLSGNPIAMAAGLACLTELSKAGNETILAEKTKTLAEG
                     FKALADKHNVPLTVQYVGGMFGLFFTEQKAVNNFQEVMKCDAAKFNRFFHLMLEQGVY
                     LAPSAFEAGFMSLAHSDEDIARTLEAADKAFAQL"
BASE COUNT         3549 a         2794 c         2429 g         3249 t
ORIGIN      
        1 taaattggtc ggcgagatag gatttgaacc tacgacccac tggtcccaaa ccagttgcgc
       61 taccaagctg cgctactcgc cgtctgatac tcacaagagt attgaatggg gtggctaatg
      121 ggattcgaac ccacgacaac tggaatcaca atccagggct ctaccaactg agctatagcc
      181 accattgtgt tgatagtgcc gcattgacat ctggcgcgct cgacaagatt cgaacttgcg
      241 acctttggct ccggaggcca acgctctatc caactgagct acgaacgctt cgatttacat
      301 caattcaact taatgcgtcg caacggaggc gtatattata gatttcactt tcccttgtct
      361 agcacttttt aaaaaaaatg taaaaaaatg tattgtttgg ttttatttta ttcaaaacgt
      421 ttaataaata tcaaaaaatg cgttttttag agctgatttg tcagatagta ataggcatat
      481 tttagtaaat ttaattgtct ttgccagcgg gttggctgtt tcaatagtcg ataaagccat
      541 tccagcccca aattttgcca aattttaggt gctcgtttca ctttaccggc aaacacatcg
      601 taagtcccgc caacacccat atataaggct tgtggatatt gttgttgtaa ctgttggata
      661 aaaagttcct gttttggagt tcccattgcc acactaataa acttcgcgcc acttgcttta
      721 atttgctcta taacgtcctg ttcttgctcc gccttaaaat agccattctg cctaccgaca
      781 atattcacct tccattgtgc caattttgct tccaccttcg ttagggtatc cgccgagctg
      841 ccgaccaaaa acaccggcac atttaacgct ccggctcttt gcattaaggt ttcccataaa
      901 tcggctccgg caattcgctc tattttatag tttggatatt tttttcgaat cgattgaaca
      961 acactgatgc cgtctgcata gttgaactcg gcttcatcta tcactcggcg taacaacgga
     1021 tttttttccg acagaatcac tttctcagca ttaattgcca ctaatcttcc gaactgaatc
     1081 cgcttttcat tcatcagcca atttgcaaaa atttcccgat ttttgaccgc ttgtaacgca
     1141 atgccccgaa tgatcacttt atcgaacatt attatttttc cccattgaaa ggattttcgc
     1201 cagcaaatag caagccataa atatcagcgt gaaaaagcaa aaacgggaaa caaatgcatc
     1261 gattccctct cgcactaata cgatcaaatt gaataaattg ccgaagcagt aggcttgcaa
     1321 caaggcggaa ttgcacgctt tggcgtaagc gaataggtta tctaaggctt taatcatggc
     1381 agctactatc cccattccca acgccataac gctaaatccg cccataatat agaaagagcc
     1441 gagtaaggta ggcgaaatag ctaaccctga ttggttgcct aaaatcactt tggtaaaata
     1501 attcgccgta ttccagacga tctcagggcg ttcttgccat aaagattgtg ggatatatac
     1561 atagaaatcc cgcacaatcg gcattaaacc ttgatattcc acctcattag aaaatacacg
     1621 agccaaattt tcccaaggcg aaaaagtatc tcggcttaaa tataagaagg tgtaaatcat
     1681 ctcgctaccg gaaagggtaa gtttgtaacg ggctagagcg aggaagaaca tcgccaccac
     1741 gccgattagg cttacggcaa tcacctttga taacgacaga tagccttgct gcaatccaat
     1801 caataagaaa aagccaaccg ctagtgctaa atttgcccat gtgccgccca ctgccacata
     1861 gcttaatatg ccgaatgccc caccaacaat cagtaacgcc caccacgctg ttttattctt
     1921 atataggaag caaaaaatta acaacgccgg caataaaaag tagaaaaatc gttttaatgc
     1981 cgaaagtatg accctatctt tggcaaacag ttggctatat ttttcgagtt tgaaaagcag
     2041 aaaaccgttt aaataaagga aatatagcag ggcaacaact gccacagcgg caaggataca
     2101 agcggtcgtt tttgcctgaa aatttgcaac aagagcagtt ggttgcgaca cagcactcca
     2161 caagcgtgaa tagacaacgt aataaatcaa atagccaaca cctgctgccg taaaaacttg
     2221 ccattgtgtt tttagctccg gcagcgggta atcaaagcca aatgccatta ttaacgaaaa
     2281 cggaaaaccg gcgtaaaaag taacaaaata gagcaaacta aacagtaaat ggaaagaaat
     2341 ccccgatttc tgataaagtt gataaagtaa gctgaaaaat agcccgacag aaacaagata
     2401 aaatccgcca agtggtatta aattattcat tttgcattaa ttcgattaat cgctgttgcc
     2461 atagtttagt gtagcccgga gcaaaaaacg caatgcggtt tttatctatg ctctttagtt
     2521 gttgtttggt tgtttgaatc tgtgaagcag tcagattttc cgccaacaaa taaggcactt
     2581 tttctgcctg tagatccaac ccaaacggat tggctgaatg taacacacaa ggtacattat
     2641 ggctaatcaa aaggcttatc gtgccaatgc cttgctggcg tttaaaattg aaatagccga
     2701 gatcacaatg gctcaataac gtaacatact cttcaaagct cagcttcttc cgcaaaattt
     2761 gcaaattttc cgccaaaaat aaccgcttgc tataggcttc cacctgccga atatagcttt
     2821 cattattttc cgggtagccc attggtatga taatccgcac attgttccct agtcgttgat
     2881 gaatctcgct taaggcttga ataagctcat tcgctggatc gcctgaattg ccgagcaata
     2941 tcgtcaagcg atcattttgt gtggggctaa tttttatttg atcacctaat ttcgtgggga
     3001 aatagattaa atgatcctgt tctgatcttg tacgcatatt tcgccacaaa tgatccagat
     3061 cgcctcttgt tgcccaaacc tgtaagattt tttgttgggc aacacgccga aacgggtaaa
     3121 acagcttaaa tttccacgaa gttgccattt catataaatc cgccccccaa atatgccaaa
     3181 tcaggttggt ggtcggcaat ctgcctaagg ctatcgccag ccaaatccaa gggttaaact
     3241 gcccgtgtaa cagaaaacaa gcggtcggat tttgccgttt ttttgcaatt aaggcgttcg
     3301 caatcgcttt ttgtgaagag aactgcttaa tccgcaaatg aggaaaagca gtttgcagtg
     3361 aaggcttgcc taccacataa aaaaaatgtt cggagtctgg caataacggc aaaagctctt
     3421 gctgaaaaaa ggttaaaacc tgttggttat gatgctcaat ctcggagcct agaatatgat
     3481 aaatcggcaa cattacacgc ttttctctcc ccaccataca aacaatatgc aagcggtaag
     3541 attttagcaa aaatttgcaa cattactgca acttctttta gctttgaaac actaaaaaac
     3601 atcacacact tggttaaaaa atgctatgat aaccgagctt ttttattatt catttatccc
     3661 aacgaggact tattttacta tgtcaaacgc aatcgctaat gtatctaaac tgattcaaga
     3721 caatgatatt aaatttgtct tattaaaatt tactgatatt aaaggtaaag aacacggggt
     3781 ttcgctccct gtcagcttag ttgccaacga tttggaagac ttattcgagg aaggcaaaat
     3841 gttcgacggt tcgtccgtag aaggttggaa ggcaattaac aaagcagata tgttgttaat
     3901 gccgattgct gaaaccgctg tagttgaccc tttcgcccgt attcctaccc tttctattcg
     3961 ttgttccatt tacgacccaa acacaatgca gtcttatgac cgtgaccctc gctctattgc
     4021 aacccgtgcc gaaaactact tgaaatccac cggtatcgcc gatagcgtaa tgtttggacc
     4081 tgagcctgaa tttttcttat tcgatgatgt gcgttttagc accgaaatga acaatgtgtc
     4141 ataccgaatt gacgatgtag aagcggcttg gaataccaac cgtaaatttg aagaaggcaa
     4201 caaagcctat cgtccgttga aaaaaggcgg ctactgtgcg gttgcaccga ttgataccgc
     4261 ccacgatatt cgctccgaaa tgtgtttatt gatggaagag atgggtttag tgattgaagc
     4321 tcaccaccac gaagttgcga cagccggaca aaatgagatc gcaacccgat tcaacagcct
     4381 gaccttaaaa gccgatgaaa cccaaatcta taaatacatc gtgcaaaatg ttgccgtaga
     4441 acacggaaaa accgcttgct ttatgccaaa accgttcgcc ggcgacaacg gctcgggaat
     4501 gcactgtaat atgtcattaa gcaaagacgg caaaaatgtg tttatgggcg ataaatacgc
     4561 cggcttatct gaaactgccc tctactatat tggcggtatc attaaacacg caaaagcatt
     4621 aaatgccttt actaacccaa ccacgaactc ttataaacgt ttagtgccgg gttttgaagc
     4681 accggtgtta ttggcatatt ctgcaagtaa ccgctctgcc tctatccgta ttccggctgt
     4741 gaccagtccg aaagcgaccc gtgtagaagc acgcttcccg gatccaatgg caaacccata
     4801 cctttgcttt gccgccctgt taatggctgg cttagacggt gtgatcaaca aaatccaccc
     4861 gggcgatgca atggataaaa acttatacga tttaccgccg gaagagttaa aagatattcc
     4921 aacggttgcc tcgtctttag aatccgctct tgacgcatta agcaatgatt ttgaattctt
     4981 aacacaaggt ggcgtgttca cgaaagactt tattgatgct tatatcggta ttcgtcgcaa
     5041 agaggtggaa cgtgtaaata tgactccgca cccggtagaa tttgaacttt actattcata
     5101 gtaacaacat atagcaaaaa acggctgaaa cactcagccg ttttttattg attgaagaaa
     5161 gcaagcactg cttgaataac acgctcttgc tcctgcttac tcaaattata aaacagtggc
     5221 aatcttacca accgttcgct ttctaaggta gtaaagcgat catcacctgc taatcgacct
     5281 aatttctgcc ctgccggact gctgtgcaac ggcacataat gaaacacggt taagatattc
     5341 tgtgccttca taaaatcaat aaaagcagtt ctctgcttca agtcacttag ctttaagtag
     5401 aacaaatgcc cgttatggcg acaatattcg ccaatgcgag gaagctcgca cttagctgtt
     5461 tgggcaagtg gcaaaaaggc ttgatagtaa ttgtgccaaa gggttaaacg ctgttggttg
     5521 attttatctg cctctataag ctgagcatac aaataagccg cttgaatttc cgacattaaa
     5581 aaacttgaac caatatcctg ccagcgatat ttatctacct caccacgaaa aaattggcta
     5641 cggttagtgc ctttctctct gatgatttcc gctttttcca gcaaatgcct cattaatcac
     5701 gatcgcccca ccttcaccgc cagcggtata gtttttggtt tcgtgaaaac tatagcaacc
     5761 aatatgcccg atggaaccta acgccctacc tttataaaac gaattgactg cctgtgccgc
     5821 atcttctacc acataaagcc cgtatttttc ggctgttgcc attattgaat ccatatcaca
     5881 agcaatgccg gcataatgca ccggcacaat cactttggtt tttggggtaa tggcttgctc
     5941 aattttgcgt tcatcaatat tcattgtatc cggacgaata tccacaaaca caatctttgc
     6001 cccacgcaac gcaaacgcat ttgcagtaga gacaaaagta tagctcggca taatcacttc
     6061 atcgtccggc tgaatatcca gcagtattgc cgccatctct aacgcagccg tgcaagaagg
     6121 ggtaagcaac actttgctac gggccaggtt ttcaagccac tgctcacata agcgggtgaa
     6181 tttaccaccg cccgaaagct gccctgttgc catcgcctgt tctatatagg cttgctccgc
     6241 ccccacaacc gggggttgat taaacggaat aaaatcagga ttgttcatca tcgtattttt
     6301 ccaaagcagg gtaaaaccaa taatacaccg ccttaatgct tgcaccaaac gcttgataaa
     6361 aacgaatcgc tttctggtta ctcagctgag tggtaatcat cagttttttc gcattttgct
     6421 gtttcgccca cgctatcgca gcatttaaca attccgagcc aataccttgt tgtcggcaat
     6481 caggctttac cgccaataat ccgattttcg cttgctgttg ggcaagtaag cgaaccgtta
     6541 ccgccccttg aatttgcccg tcagcattgc attgaaccaa gccaatatca tcaaacttgc
     6601 cttttaccgc attttcaatc caagtccggt aaaagcgttg attctcttcc cttgaaaaat
     6661 agggcgaacg aaaccggcta tcgggaaatg ccgaaccaaa caataagttc aagtcgggca
     6721 aatctgccat atccgccggg cgacaagcgg tcatattttc agaaaatgtt gcaagtgcca
     6781 gctcaaattc caattctccc tccacaagta caaaaccttg tttttgcaac ctagcgattt
     6841 gcctaaaatc atcagccgct acttttactt gcacaatttc tctaccgaaa aaatcggaca
     6901 gccattgatc cggcttcatc ttacccacac tcctcgacaa tcaataatat gccgttgcct
     6961 gatctgttcc cttgaaattt gcttaaatga agtgtgatcc actaacaaga ctaaaatgtc
     7021 tgcctgcgaa agtgcggtgt tgagatcgac taaggtgatt ttttcgccag ccagctgttg
     7081 aatatttggc tcaaccgcca acaggctacc ctgatgccaa gcggcaagtt gccgggtaat
     7141 cgctaatgcc gggctttccc gcaaatcatc aatattcggc ttgaaagcta gccctaaaca
     7201 agcgatggtt agctcacttg gcttacaatc ttgctccatc gcacagtctg cgaccgatgt
     7261 tttcacttgc tcgattaccc attgcggttt gctgtcattc acttctcgtg ccgtgcgaat
     7321 aaggcgagcc tgttggggcg atgtggaaac gataaaccac gggtcaaccg ccaaacaatg
     7381 tccgcccacc cctgctccgg gctggagaat atttactctc gggtgaagat ttgccaattc
     7441 aattagctcc cacacattga tcttcaacgc atcacaaatc attgaaattt cattggcaaa
     7501 ggcaatgttc acatcacgaa agctgttttc caccaacttg cacatctccg ctgtgcgagc
     7561 tgtggtggtg acacaacgtc cttttgcaaa aatttggtat aaatcgaccg cttgttgacc
     7621 gcattgttcg cttaatccgc cgataatgcg gtcattttca accaattccg tcattatatt
     7681 acccggcaaa acacgttcag ggcagtaggc aatagacaca tcggctggaa aggctaaatc
     7741 agggcgagct tggcttagcc attcggctaa attttctgtt gtaccgacag gcgaagtgga
     7801 ctccagcacc accaaattcc ctttacgcaa acaaggggca atcatagcgg cggcattttg
     7861 aatataagtg agatcgggct gcttcccgca aagtggggtt ggcacggcga tgataaaagc
     7921 atcggccggt tgcggtttgg cagttgcaaa aaaattacct tttttgaccg cttgtgtgaa
     7981 ggcagtttgt aaatccggct cgataatatg aatgttgcct tgattaaggc ttgccaccac
     8041 ttgcggatta atatccaccc caattacttg cttgccggca ttggcaaaaa cgactgaggt
     8101 cggcaagccg atatagccta accccagaat acaaatagtg ttaaattcag ttttactcat
     8161 catcagttac aaagagaaat ggcacactaa attgtgtgcc attttagatt aaagttccgc
     8221 aggttgagct ttcgctttca ccgcaaaact gagcataaag cccagcagta agccacttaa
     8281 tgccccaatc atcagccaaa ataggcggat caggcgattc tgatttaagt ggaacgctag
     8341 gcgatttaac caagcgataa gctgtaagtt ggttgtctaa cggctgaaca gaacgcatca
     8401 tttgcagttt agctgcccaa tcttgtgagc cttgcttacc gttaatattc aactccgaag
     8461 cagttttaat ttgctggaac aagactttcc atttcgcaat taaatcggcg tttaatttat
     8521 ctcgagcttg ggtgtttacc aacggaataa aatcggctaa taatttttga gcctcttccg
     8581 cattttctgc aattaagctg acattatctg ccgaagttgc catatctttt tcaaaacgga
     8641 attgttcaac taattcagcc gccaccaccg ccggtgattt ctttgcaacc tgagctttta
     8701 atttcaccgc ttctgtttgt agcaaatagg cttgaagcaa gtcggcggac gtgaggttgc
     8761 gtttaaattc cgcataaacc tgctcacttg cctgttgctg tgccgtttgg ctattcgctt
     8821 cttggctatt actattcaaa aaatggtagg tggaaagtaa cgagtaataa ttacctaaat
     8881 cgggaatagt cggttgctca aattgagcgg tcactttcca tttttcaggt tgagtataac
     8941 tcagcccata accggcacct gccccgatag cagcaaataa aattagcact aaaagtcgat
     9001 aaaataaggt tttcacaaca tatcctttaa agttgtttgc tacgttttgc acggcgtttt
     9061 agacggcgaa caaaacgggt tacacgccaa gcgtgggtaa tggaataggc gtataggaaa
     9121 aacagcccga taaacattag catcatcacc cactgattcc aataatacac ctcgcctaat
     9181 accccaatgg tggaacaaaa tcccgcccag agggtaatca ccaataatgc ttggcgagag
     9241 gtaagccctg ctcgcatcat taaatggtgt aggtgcaagc ggtctggttt gaacggactt
     9301 ttaccttttt tcaaacggcg gataatcacc gcaaccatat caattaacgg cacggcaatc
     9361 agccacaaac cggtaatcgg gctaattggc gagccttgcc cttgggtgct taacagcaga
     9421 atccaaataa tggtaaagcc gatcagcata ctgcctgagt cgcccataaa cactttccat
     9481 ttcgccccaa acaggctcaa attgaacatt gcatacggca acaacacaaa gataagggca
     9541 aagcaccaat agcccaaact tggttcgcca ttaatgaaca ttaaagtgcc aagaccggca
     9601 aaactcacgc tggaaagccc tgctaataag ccatcaatcc catctaccat attaaacgca
     9661 ttaataacgc caatggtgat aaacacggta aagacaatgc cgagccaacc taattctata
     9721 ctaaaggggg caataatttg ccctaaactg ctgagcgaca agccactgta aatcatcgcc
     9781 ccagctagtg ctgcttgaat cccggcacgc agtaatgggc tgatgtcaaa tcggtcatct
     9841 aacacgccga taatcagcaa aatagttacc gctgtcagat acagttccgg cagccgcata
     9901 tcttgccact gcataaaata gaaagtgaga ttgccgataa ataatgcaat accaccgatt
     9961 aacggaatca acccctgatg gcgtttacgg aagttgggct tatctaccaa accaacaaat
    10021 tccgccaccg gacgcatcac aatcagggct aaaaaagaaa caataaatac ggttaaaaaa
    10081 gtaagccaca tacagggatt gcctcaaaaa atgagtcata aaataggaat gcagaatagc
    10141 ataaggcaac aaaatcgtaa attttttagc gaaaacaagg gcttttcagt acaataacag
    10201 gcaaattttt acatcaaaag aaaggaattg atatgtctat ttcagaacaa ctgtttgaac
    10261 aagcccaaaa agtgattccg ggcggtgtga actcccctgt gcgtgcattt aaaggcgtgg
    10321 gcggcacacc ggtttttatt gaaaaagccg aaggtgctta tattaccgac agcgacggca
    10381 aacaatatat cgactatgtc ggctcttggg ggccaatggt actcgggcat aaccacccgg
    10441 cgattattga tgcggtgcta aaagccgtgc caaaaggctt aagtttcggt gccccaacgg
    10501 cagcagaaat cacacttgcc gaattagtgt gcaaattagt accttctatt gaaatggtga
    10561 gaatggtgag cagcggaaca gaggcaacaa tgtctgccat tcgtttggct cgtggctata
    10621 ccaaccgaga taaaatcatc aaatttgaag gctgctacca cgggcattcc gattctctgt
    10681 tagtaaaagc cggttcaggt gctttaaccc tcggtcagcc aagcggcccg ggcgtacccg
    10741 ctgatttcgc caagcatacg cttacttgca cctataatga tttagattca gtaaaagcag
    10801 catttgagca atacccaaat gagatcgctt gtttaattgt tgagcctgtt gccggcaata
    10861 tgaactgcat tccgccacaa gaaggctttt tacaaggctt acgtgatctt tgcacacaat
    10921 atggtgcggt atttattatt gatgaagtaa tgaccggctt ccgtgtcgca ctcggtgggg
    10981 ctcaatctta ctatggggta acaccggatt taaccacact cggcaaaatt atcggcggcg
    11041 gaatgccggt gggggcattt ggtggtaaaa aagagattat ggaatacatc gctccaactg
    11101 gcccggttta ccaagccggc acgctctcag gcaacccgat tgcaatggct gcaggtttgg
    11161 catgcttaac tgaattatca aaagcaggaa atgaaaccat tttagcggaa aaaaccaaaa
    11221 ccctcgctga aggctttaaa gctcttgcag ataagcacaa tgtgccatta acggtacaat
    11281 atgtcggcgg aatgttcggc ttattcttca ccgaacaaaa agcagtaaac aacttccaag
    11341 aagtaatgaa atgtgatgcc gccaaattca accgtttctt ccacttaatg ctggaacaag
    11401 gcgtgtattt agccccatcg gcattcgagg cagggtttat gtctttagct cacagtgatg
    11461 aagatattgc tcgtacgcta gaggctgcgg ataaggcatt tgctcagctt tagaagaatg
    11521 acaagcggtt gggtttactc aataatttgc aagtttttga gggaatttga ccgcttgtag
    11581 tgcaaatttc tcttacgata gcaattatga tggtgttcgt ctctgacgag tgcttataca
    11641 aactttcatt atgcttaaac aagcacccgt ctggagacgg gcgctatcga gggaatagga
    11701 ttgataaagc aatatatggg cttccaacac ttgcaggcaa ggacaagtct tacactttct
    11761 aatattacaa atatatttct ttctttaatc tataccataa aggtttaagt tggttcttta
    11821 taactttgga atccatagat gaataagctc tctttccata agagataaaa ttagattttc
    11881 cgaaatgaga atacttagaa aatagctttc ttttataaat gcctttgata gctacccctc
    11941 gtcttattct tatcctatta tatttaccct gagtttgctt agctagacta acccctcgtt
    12001 tcattttatt tgaatatcgt g
//
LOCUS       DANLXD010000082        11922 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.082, whole genome shotgun sequence.
ACCESSION   DANLXD010000082 DANLXD010000000
VERSION     DANLXD010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11922)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11922)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11922
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.082"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(544..2139)
                     /locus_tag="PXD18_001888"
     CDS             complement(544..2139)
                     /locus_tag="PXD18_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6302288.1"
                     /translation="MRLSQLSLSVLLLSASSLVAAAPVNTLINCVATPPMKLSPAITN
                     DANDFNASSQQIYNRLLAFKAGELTVEPSLAERWEISDDGLSYTFHLRKDVKFHSNKQ
                     FTPTRTLNADDVVFSFQRQMDLNHPYHKVSDGTYFYYHWMNLPKILKTVEKVDDYTVK
                     ITLQQPNAPFLTTLAMDFLSIYSKEYADKLLAEGKPELLDQAPIGTGPFVFQAYQTDQ
                     AVRYVANPDYFQGKAKFEKLIFSITPDAGTRYAKLKAGECDVIDFPNISDIAQMKQDP
                     KVNLLQRDGLNLAYIGLNSTKPALNNAKVRQALHYATDKKAIVEAVYQGGGTVASNPF
                     PDSVLGYNPNLPQYEFNLEKAKALLTEAGFADGFETEIWVQPVVRPSNPNPRRTAEII
                     QADWAKIGVKAKLVTHEWADFNKRTREGEFSTGTYGWTSRNGDPDNFLFPLLSKSNIP
                     GTNYGRWTDEKFEQLLAQAVQTQNRDERAKLYQQAVEIANEQTPFIPLAHAINYVPLS
                     KRVQGFVQNPFGYTPFYGVSLSE"
     gene            2288..2728
                     /gene="mioC"
                     /locus_tag="PXD18_001889"
     CDS             2288..2728
                     /gene="mioC"
                     /locus_tag="PXD18_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein MioC"
                     /protein_id="HDL6302289.1"
                     /translation="MTSICIITGSTLGGAEYVADHINEVLSEQGFEVELFNQATLADI
                     EGKTNLIIVTSTHGAGELPENIQQLFDDLANSSADFSSMKFGVIGLGSSDYDTFCNAV
                     NIVEEALKAKGASQVCESLRIDVMNNFDHDGSAEEWLPSFVEQL"
     gene            2740..2907
                     /locus_tag="PXD18_001890"
     CDS             2740..2907
                     /locus_tag="PXD18_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1232 domain-containing protein"
                     /protein_id="HDL6302290.1"
                     /translation="MNKISANKAKWIKIAIILIYMFSPVDILPEAILGPFGLVDDAAA
                     LMLLIKTILEK"
     gene            complement(2996..3469)
                     /gene="asnC"
                     /locus_tag="PXD18_001891"
     CDS             complement(2996..3469)
                     /gene="asnC"
                     /locus_tag="PXD18_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator AsnC"
                     /protein_id="HDL6302291.1"
                     /translation="MYSKNTTKSEIDKLDQKILRWLIKDARTPYAEMAKVFGVSAATI
                     HVRVEKMRQAGIIESTKIVVDERKVGYDVCCFIGIILKSAKDYDKVIAKLSEFNEVVE
                     AYYTTGNYSIFIKVMTHTIEELHSVLAGKIQSIDEIQSTETLISLQNPISRDILP"
     gene            3670..4662
                     /locus_tag="PXD18_001892"
     CDS             3670..4662
                     /locus_tag="PXD18_001892"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HDL6302292.1"
                     /translation="MKKSFILQQQEISFVKNTFTQYLIDKLGIIEVQGPILSEVGNGM
                     QDNLSGIEKAVKVNVKCIPSATYEVVHSLAKWKRHTLARFGFKEGEGLFVHMKALRPD
                     EDSLDRTHSVYVDQWDWEKVIPEGRRNFDFLKETVNEIYKAIRLTELAVEARFDIPSV
                     LPKQITFVHSEDLVQRYPNMTSKERENAICKECGAVFLIGIGGKLSDGKPHDGRAPDY
                     DDWTTESEQGYKGLNGDILVWNEELGTAFELSSMGIRVDETALRLQVALTGDEDRLEM
                     DWHKDLLAGRLPLSIGGGIGQSRLVMFLLRKKHIGEVQSSVWPKAVFEEFENIL"
     gene            complement(4786..5205)
                     /gene="atpC"
                     /locus_tag="PXD18_001893"
     CDS             complement(4786..5205)
                     /gene="atpC"
                     /locus_tag="PXD18_001893"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HDL6302293.1"
                     /translation="MASQFELTVVSAERKIFEGTVTSVRVSGTDGELGVYAGHAPLLT
                     AIKPGMVKFTLADGKEEFIYVSGGFLEVQPTVVTVLADTAIRGEELDEQRILAAKRKV
                     EETLSKTSDADMTAKLAREIAKLRVYELTKTKLANKR"
     gene            complement(5233..6606)
                     /gene="atpD"
                     /locus_tag="PXD18_001894"
     CDS             complement(5233..6606)
                     /gene="atpD"
                     /locus_tag="PXD18_001894"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011978979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HDL6302294.1"
                     /translation="MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQL
                     GGGVVRCIALGSSDGLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEE
                     ERWTIHRAAPSYEEQANSTELLETGIKVIDLVAPFAKGGKVGLFGGAGVGKTVNMMEL
                     IRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVA
                     LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVL
                     QERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDP
                     LDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILGMDELSEDDKRLVARAR
                     KIERFLSQPFHVAEVFNGVPGKFVPLKETIRGFKGILEGEYDHIPEQAFYMAGSIDEV
                     VERAKQM"
     gene            complement(6627..7493)
                     /gene="atpG"
                     /locus_tag="PXD18_001895"
     CDS             complement(6627..7493)
                     /gene="atpG"
                     /locus_tag="PXD18_001895"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011201492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HDL6302295.1"
                     /translation="MAGAKEIRTKIASVRNTQKITKAMEMVAASKMRKTQERMAASRP
                     YAESIRKAISHIAKGNIEYKHPFLTPRPVKKVGYLVVSTDRGLCGGLNINLFKTVLHE
                     LKEKDDQGVKSRLAVVGNKGISFFNPMGLEIKGHINGLGDTPAMEDLVGIVNGMVNAY
                     REGEIDEVYVVYNRFINTMSQKPTVQQLLPLPALENDSLEQTGSWDYLYEPNPQALLD
                     SLLVRYLESQVYQAVVDNLASEQAARMVAMKAATDNAGNLINELQLVYNKARQASITN
                     ELNEIVAGAAAI"
     gene            complement(7519..9060)
                     /gene="atpA"
                     /locus_tag="PXD18_001896"
     CDS             complement(7519..9060)
                     /gene="atpA"
                     /locus_tag="PXD18_001896"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001176751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HDL6302296.1"
                     /translation="MQLNSTEISELIKKRIAQFNVVSEAQSTGTIVSVSDGVIRIHGL
                     SDVMQGEMIALPGNRYAIALNLERDSVGAVVMGPYADLAEGMQVQCTGRILEVPVGRG
                     LLGRVVNTLGQPIDGKGEIQNDGFSPIEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIG
                     RGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGAL
                     ANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAFPGDVFYLHSRLLERASRVNADYVERFTNGAVKGQTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLESGLFNAGIRPAVNPGISVSRVGGSAQTKLVKKLAGG
                     IRTALAQYRELAAFAQFASDLDEATRKQLSHGQKVTELLKQKQFEPMSVAQLGLSLAA
                     AEYGYLDDIPVERVGSFEANLLAYAQSNYGEFMQELSKSGNFNDEIKDKLNEILSGFK
                     KNSAW"
     gene            complement(9073..9606)
                     /gene="atpH"
                     /locus_tag="PXD18_001897"
     CDS             complement(9073..9606)
                     /gene="atpH"
                     /locus_tag="PXD18_001897"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDL6302297.1"
                     /translation="MSELSTVARPYAKAAFDFALEQGQLEQWQQMLTFSAAVANDEQV
                     ASFLNSSLASGQISETFIKICGEQLDQYGQNFIRVMADNKRLAVLPAVLNAFLELRAE
                     QESIKDVEVVSADKLTDAQEAKIANAMEKRLGTKVRITSSIDSSLIAGVIIRYDDVVI
                     DGSSRGQLNRLSQELSL"
     gene            complement(9620..10090)
                     /gene="atpF"
                     /locus_tag="PXD18_001898"
     CDS             complement(9620..10090)
                     /gene="atpF"
                     /locus_tag="PXD18_001898"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HDL6302298.1"
                     /translation="MNLNATLIGQLIAFALFVAFCMKFVWPPLIRVIEERQANIASAL
                     ASAEKAKQEQADSKAAADQEILRAKEEAQNIIDLATKRRNEILESVQAEAEVERQRII
                     EQGYAEVESERKRVQEELRQKVAALAIAGAEKIVGRSVDAAANNDIIDKLVAEL"
     gene            complement(10151..10405)
                     /gene="atpE"
                     /locus_tag="PXD18_001899"
     CDS             complement(10151..10405)
                     /gene="atpE"
                     /locus_tag="PXD18_001899"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HDL6302299.1"
                     /translation="MESVITATIIGASILLAFAALGTAIGFAILGGKFLESSARQPEL
                     ASSLQTKMFIVAGLLDAIAMIAVGISLLFIFANPFIDLLK"
     gene            complement(10523..11311)
                     /gene="atpB"
                     /locus_tag="PXD18_001900"
     CDS             complement(10523..11311)
                     /gene="atpB"
                     /locus_tag="PXD18_001900"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HDL6302300.1"
                     /translation="MAGTTAEYISHHLSFLSTGEGFWAVHLDTLFFSLVAGAIFLWVF
                     SRVAKNATTGVPGKLQCFVEIVIEWVNGLVKDNFHGPRNVIAPLALTIFCWVFIMNAI
                     DLIPVDFLPQLANLFGIHYLRAVPTADISATLGMSICVFALILFYTVKSKGFGGLVKE
                     YTLHPFNHWAFIPVNFILETVTLLAKPISLAFRLFGNMYAGELIFILIAVMYMADNFA
                     LQALGIPLHLVWAIFHILVITLQAFIFMMLTIVYLSIAYNKADH"
     gene            complement(11334..11717)
                     /locus_tag="PXD18_001901"
     CDS             complement(11334..11717)
                     /locus_tag="PXD18_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HDL6302301.1"
                     /translation="MSAVINRAKSQYKQALKVEFFLLCVFALGVSLWKMNFNFSFLGG
                     ALASFLPHLVFVYWVFFKKSAKNQSKMTAFYRGEGMKWLVTIILVIGCFKLIPALDVV
                     LFFVGYFIALFLNNMIPFVLSKHHH"
BASE COUNT         3583 a         2588 c         2256 g         3495 t
ORIGIN      
        1 tgcgccagcc aatatcaata gttgctgtca tcagcatgac cgagactacg gtatcaaggg
       61 cacagtcagc cgagccgaag ccgacaagcg gttaagacat tgcttaattt cgcaagggaa
      121 tccgattaag gcgtgggtgt tttgggttgt ggtgaggttg tttgggtgga tttattacaa
      181 ggagaaaaat atcaatggaa agtcataaaa caggaaatat cattactgag caagcaagca
      241 agcaagcaag caagcaagca agcaagcaag caagcaagca agcaagcaaa gtgtagctca
      301 atttaaacaa gctccgctac cttttacagg tcaaaagcgg atgtttttaa aacactttta
      361 atgatgattt aaagggcgtt tgttttcagt ttattttgca taacttttgt gattacggct
      421 atgcaaaatg atttgcaaaa ctatgcaaaa taaatcgacc gcttacaatt ctaaaagaaa
      481 agcagtctat tctctaccac attttgcaaa aaagtggcaa aaatagaccg cttgtatggc
      541 atatcactcc gataaactca ccccataaaa tggcgtgtag ccaaacggat tttgcacaaa
      601 accttgcacc cgtttgctga gtggtacata attgatagcg tgagccagcg gaataaatgg
      661 cgtttgttcg ttggcaattt ccaccgcttg ttgatagagc ttcgcccgct cgtcacggtt
      721 ttgggtttgt acagcttgag ctaataactg ctcaaatttc tcatccgtcc aacgcccata
      781 atttgttccc ggaatattag atttgcttaa taaagggaag aggaaattat caggatcacc
      841 attacggctt gtccaaccat aagtgccggt agagaactcg ccttcacggg tgcgtttgtt
      901 aaaatccgcc cattcgtggg tcactaattt cgctttcacc ccgattttcg cccaatccgc
      961 ctgaataatt tcagccgttc gacgtgggtt tgggttagaa gggcgcacta ccggttgtac
     1021 ccaaatttcc gtttcaaatc catcggcaaa gccggcttct gttaataggg ctttggcttt
     1081 ttcaaggtta aattcatatt gcggtaaatt tggattatag cccaacaccg aatcagggaa
     1141 cggattactt gccaccgtgc caccgccttg ataaacagcc tcgacaatcg ctttcttatc
     1201 ggttgcataa tgcaaggctt ggcgaacttt ggcgttattt aatgccggtt tggtgctgtt
     1261 taagccgata taagctaaat tcagcccgtc tctctgtaac aaattcacct tcggatcttg
     1321 tttcatttgg gcaatatcgg aaatattcgg gaaatcaatc acatcgcatt cacccgcttt
     1381 cagtttggca taacgagtgc ccgcatcagg ggtaatacta aaaatcagtt tctcaaattt
     1441 tgctttacct tggaaataat ccgggttcgc aacataacgc accgcttgat cggtttgata
     1501 ggcttggaac acaaaaggcc ctgtgccgat cggggcttga tccaataact ccggcttgcc
     1561 ttccgccagc aatttatccg catattcttt tgaataaatc gacaagaaat ccatcgctaa
     1621 ggttgtcaga aaaggagcat taggttgctg taaggtgatt ttaacagtgt aatcgtccac
     1681 tttttccact gtttttaaaa tcttcggcaa attcatccaa tggtaataga aataagtacc
     1741 gtcagagacc ttatggtaag ggtggtttaa atccatctgg cgttggaacg agaacactac
     1801 atcatccgca ttcagcgttc gagttggcgt aaattgttta ttggaatgaa atttcacgtc
     1861 tttacgtaaa tggaatgtgt aacttaagcc atcgtcactg atttcccaac gttccgccaa
     1921 actcggctca accgttagtt caccggcttt aaacgctaat aagcgattat aaatttgttg
     1981 tgaactggcg ttgaaatcat tggcatcatt agtaattgca ggactaagtt tcatcggtgg
     2041 agttgccacg caattaatca acgtatttac cggagctgct gccaccaaac tgctggcact
     2101 taagagtaaa acagaaagag ataattgaga aagacgcata aagactcctt aacattttct
     2161 actaacttac tcggcattaa cgtattttca aaataactaa aggttataat ttataatcag
     2221 aataatcagt tgcaaaccaa tgattcttgg ctagaatatt ggcagttttt taaacgagag
     2281 atttactatg acatcaattt gtatcatcac cggcagcacc ttaggcggtg cggaatatgt
     2341 tgccgatcac attaatgagg tattaagcga acaaggtttt gaagtggaac tgtttaacca
     2401 agccaccctt gccgatattg agggcaaaac caatctgatt atcgttacct ctacccacgg
     2461 agccggcgag ttacccgaaa atatccaaca gctatttgac gatttagcaa atagctcggc
     2521 tgatttcagc agtatgaaat ttggtgtaat cggtttaggt agctccgact atgacacctt
     2581 ctgcaatgca gtaaatattg ttgaagaagc tctcaaagcg aaaggggcaa gccaagtttg
     2641 cgaatcactg agaattgatg taatgaataa tttcgaccac gatggcagtg ctgaagaatg
     2701 gttaccatca tttgttgaac aattataact taagtatcaa tgaacaaaat cagtgcaaat
     2761 aaggcaaagt ggattaaaat cgctattatc ttaatctata tgttcagccc tgtagatatt
     2821 ctacccgaag cgattttagg cccattcggt ttggttgatg atgccgccgc attaatgcta
     2881 ttgattaaga ctattttgga aaaataggca tagtagacaa aatagttgca aaaaaccaaa
     2941 acaaaacgac cgcttgtaac ccaatacaag tggtcttatc ttttacttaa ttcttttaag
     3001 ggagaatatc tcttgaaata ggattttgaa gtgaaataag cgtttctgtt gactgaattt
     3061 catcaataga ctgaattttt cctgctaata ccgaatgcaa ctcttcgatg gtatgggtca
     3121 ttactttaat aaaaatagaa taattaccag tggtatagta cgcctcaaca acttcattaa
     3181 attcactaag tttagcaatt actttatcat aatctttggc tgattttaaa ataatgccaa
     3241 taaagcaaca cacgtcatac ccaaccttac gctcgtccac tacgattttg gtagattcaa
     3301 taatgccggc ttggcgcatt ttttcaacac ggacatggat agttgcggca ctcacaccaa
     3361 aaacttttgc catttccgca taaggcgtgc gagcatcttt aattagccaa cgtaaaattt
     3421 tttgatccag cttatcaatt tccgatttag tcgtgttttt actgtacatt ttttctcctc
     3481 aaaatcaaac taattagata agatttaaaa atattgcaaa tattttaaat gaaatttatc
     3541 acaaatgctt ttttatttga taaatattgc attttttaga tatttcttta aattagcact
     3601 catcaattct taaatgcaat caagcacgag aaataaaaaa tcaacattct ttaattagga
     3661 aagcaaacaa tgaaaaaatc ttttatttta cagcaacaag aaatcagttt tgttaagaac
     3721 acatttactc aatatttaat tgataaatta ggcattattg aagttcaggg gcctattttg
     3781 agcgaagtcg gcaacggtat gcaagacaac ctttccggta tcgaaaaagc agtaaaagta
     3841 aacgtaaaat gtattccaag cgctacttat gaagtggttc attctcttgc aaaatggaaa
     3901 cgccacacct tagctcgttt tggatttaaa gaaggagaag ggttatttgt tcatatgaaa
     3961 gctcttcgcc ctgatgaaga ttctttagat cgcacacact cggtatatgt tgaccaatgg
     4021 gactgggaaa aagtcattcc tgaaggtcgc cgcaacttcg atttcttaaa agaaacggta
     4081 aacgaaatct ataaagcaat tcgtttaacc gaattagcgg tggaggctcg tttcgatatt
     4141 ccatctgtat tgcctaaaca aattactttc gttcacagcg aagacttagt gcaacgctat
     4201 ccgaatatga ccagcaaaga gcgtgaaaat gctatctgta aagagtgcgg agcggtgttc
     4261 ttaatcggta tcggcggcaa attatcagac ggtaaacctc acgatggacg agctccggac
     4321 tatgatgact ggacaaccga gtccgaacaa ggctacaaag gcttaaacgg cgatatttta
     4381 gtttggaacg aagaactcgg cacagccttt gaactttcct caatgggtat tcgtgtagat
     4441 gaaaccgcct tacgcttaca agttgcttta actggcgacg aagaccgcct cgaaatggat
     4501 tggcacaaag atttattagc cggcagactc ccgctttcta tcggcggcgg tatcggtcaa
     4561 tctcgcttag tgatgttctt actacgcaaa aaacacatcg gtgaggtgca atccagtgtc
     4621 tggccaaaag cggtatttga agagtttgag aatattcttt aataaaacaa aaaagcgaac
     4681 cttagggttc gcttttgctt tctacaagcg gtcttatttt gcaaaaaatt tactgttttt
     4741 aaccgcttgt aaaacaaaac cccactttcg tggggttttt tgatattaac gtttattcgc
     4801 taatttggtt ttagtgagtt cgtaaacacg cagtttcgca atttctctcg ctaacttcgc
     4861 ggtcatatcc gcatcgctgg tttttgaaag tgtttcttct actttgcgtt ttgcggcaag
     4921 aatacgctgt tcgtctagtt cttcaccacg aattgcggta tcagccaaca ctgttactac
     4981 ggtcggttgt acttcaagga aaccacctga aacgtagata aactcttctt tgccgtcagc
     5041 taaagtgaat ttaaccattc ccggtttaat tgcggttaat aacggtgcat gccctgcata
     5101 cacccctaat tcaccatctg tccctgaaac acgcacgctg gtaactgtgc cttcaaagat
     5161 tttacgttct gcactcacta ccgtgagttc aaattgagat gccatgttgt tctcctttag
     5221 tttagaacaa aattacatct gttttgctct ttcaaccact tcgtcaattg aacccgccat
     5281 atagaacgct tgttccggaa tatggtcgta ttcgccttct aaaatgcctt taaagccacg
     5341 aattgtttct tttaacggta cgaatttgcc cggtacgccg ttgaatactt ccgcaacgtg
     5401 gaatggttgt gaaaggaaac gttcgatttt acgcgcacga gcaacaaggc gtttgtcgtc
     5461 ttccgataat tcatccatac ccaaaattgc aatgatgtct tttaactctt tataacgttg
     5521 taatgtacct tgtacaccac gagcaacgtt atagtgttcc tcaccaacca cgagtggatc
     5581 taactgacga gaggttgagt caagagggtc aaccgccggg taaataccga gtgaagcgat
     5641 attacggctt aataccaccg ttgagtctaa gtgggcaaag gtagttgccg gagacgggtc
     5701 agttaagtca tccgccggaa catataccgc ttgcacagag gtaatagagc cggttttggt
     5761 tgaggtaata cgctcctgta atacgcccat ctcttctgca agagtcggct gataacctac
     5821 cgcagacggc atacgaccta ataacgcaga tacttcggta ccagctaaag tataacggta
     5881 gatgttatcc acgaagaata atacgtcacg accttcatca cggaattttt ctgccatggt
     5941 taagccggtt aatgccacac gcagacggtt gcccggtggt tcgttcattt gaccgtaaac
     6001 cagcgatact ttgtctaata cgttagagtc tttcatttcg tggtagaagt cattaccctc
     6061 acgagtacgc tcacctacac cggcgaatac cgagtaaccg ctatgttcga tagcgatgtt
     6121 acggattaac tccatcatat ttacggtttt acctacaccc gcaccaccga ataagccaac
     6181 tttaccaccc ttagcaaatg gagcaactaa gtcgataact ttgataccgg tctctaaaag
     6241 ctcggtgctg ttcgcttgtt cttcgtagct tggtgctgca cggtggattg tccaacgttc
     6301 ttcttcaccg attgggcctg cttcatcaat tggctcacct aatacgttca taatacgacc
     6361 gagtgttttt gtaccaaccg gtacttcaat cgctttattc gtattttcaa cttttaagcc
     6421 acgttttaaa ccatcagatg aaccaagtgc gatacaacgg accacaccgc cacctaattg
     6481 ttgttgaact tcaagggtta atcctgattc aacttttaat gcatcataaa cttttggtac
     6541 tgcatcttgc ggaaactcaa catcgattac cgcaccgatg atctgtacaa tttttcccgt
     6601 tgccattacc gttcctctat tcattgttaa attgctgcgg cacccgcgac aatttcattt
     6661 aattcattcg taatacttgc ttgacgagct ttgttataca ctaactgtaa ctcattaatc
     6721 agattacctg cgttatcggt tgctgctttc attgccacca ttcgagcagc ctgttcagac
     6781 gcaagattat ctaccactgc ctgataaact tgagattcta aataacgaac cagtaagctg
     6841 tctaataacg cttgtggatt tggttcatag agataatccc aagaaccagt ttgctctaat
     6901 gagtcatttt ccagtgcagg caaaggaagc aactgttgta ctgtcggttt ttgtgacatc
     6961 gtgtttataa aacggttata taccacatac acttcatcaa tttcgccttc acggtaggca
     7021 tttaccatac cattaacaat accgactaaa tcttccattg ccggtgtatc acccaatcca
     7081 ttgatatgac ctttaatctc tagccccatt gggttaaaaa aggagatccc tttatttccc
     7141 accacagcaa gtcgagactt aacaccttgg tcatcttttt ctttcaattc atgtaaaacg
     7201 gttttaaata aattgatatt taagccacca cataaaccgc gatcggttga aactactaaa
     7261 tagccaactt tttttaccgg acgtggggtc aaaaatgggt gtttatactc aatgttacct
     7321 ttggcaatat ggctaattgc cttgcgaata ctttcagcat aagggcgaga agccgccata
     7381 cgctcttggg ttttacgcat ttttgatgcg gcaaccattt ccatcgcttt ggtaattttt
     7441 tgtgtattac gaacacttgc aattttggtt cttatctctt tagcacctgc catattattt
     7501 ctccgctaaa aagttagatt accaagcact gttctttttg aaaccagata aaatctcgtt
     7561 caatttatct ttaatttcat cgttgaaatt gccggatttt gacagttctt gcataaactc
     7621 gccgtagtta ctttgagcat aagctaataa gtttgcttca aatgagccaa cacgctcaac
     7681 cggaatatca tctaagtaac cgtattcagc tgctgctaat gataaaccta attgtgcaac
     7741 agacatcggc tcgaattgtt tttgtttcaa caattcagtt actttttgac cgtgtgaaag
     7801 ctgtttacgt gttgcttcat caagatctga tgcgaactgg gcaaatgccg ctaattcacg
     7861 gtattgagca agtgcggtac ggataccacc ggcaagcttc ttaaccagtt tagtttgtgc
     7921 agaaccacct acacgggaaa ccgagatacc cgggtttacc gcagggcgaa taccggcatt
     7981 gaataagcct gattctaaga aaatctgacc atcggtaatt gaaattacgt tagtcggtac
     8041 gaaggctgaa acgtcacctg cttgggtttc gatgatcggt aatgcggtta aagaaccggt
     8101 ttgacctttc acagcaccgt tagtgaaacg ttctacatag tctgcattta cacgagacgc
     8161 acgctctaat aagcgagagt gtagatagaa cacatcaccc gggaatgctt cacgacccgg
     8221 tggacggcgt aataacaatg aaatttgacg gtaagcaact gcttgcttag acaaatcatc
     8281 gtaaacgatc aacgcatctt caccacggtc acggaagtat tcacccattg cacaacctgc
     8341 ataaggtgca agatattgta atgcagcaga ttcagacgca gaagccacta caacgatagt
     8401 gttcgctaat gcaccgtgtt cttctaattt acgcaccacg ttggcgatag ttgatgcctt
     8461 ttgaccgatt gcaacgtaga tacatttaat gcctgaatca cgttggttga tgatcgcatc
     8521 aatcgctaat gcggttttac cggtttgacg gtcacctata atcaattcac gctgaccacg
     8581 accgattggt accattgagt ccaccgcttt gtaaccggtt tgaaccggtt gatcaaccga
     8641 ttgacggtcg ataacgcccg gtgcgatcac ttcgattggt gagaaaccgt cattttggat
     8701 ttcgccttta ccatcgattg gctgacctaa ggtatttaca acacgaccta ataagccacg
     8761 accaaccggc acttctaaaa tacgaccggt acattgtact tgcatacctt ctgctaaatc
     8821 ggcataaggt cccattacaa ctgcaccaac agaatctctt tctaagttta atgcaatcgc
     8881 ataacgattg cccggtaatg caatcatttc accttgcatt acatcagata agccgtggat
     8941 acgaataacc ccgtcactta ccgaaacgat tgtccctgtg ctttgagctt cactcaccac
     9001 attaaactgg gcaatacgtt ttttaatcaa ttcactaatt tcagttgaat ttagttgcat
     9061 tttttattcc tcttacaagc tcaactcttg actcaagcgg tttagctgtc cacgactact
     9121 accatcaatc actacatcat cataacgaat gatcacaccc gcaattaatg aactatctat
     9181 tgatgaagta atacgtactt tcgttccgag tcgcttttcc atcgcattgg caatttttgc
     9241 ttcttgtgca tctgttaatt tatctgcaga aacaacctca acatctttaa ttgattcctg
     9301 ttctgctctt aattctaaaa atgcattcaa taccgcaggt aatactgcta aacgcttgtt
     9361 atcagccatt acgcgaatga aattttgccc atattgatct aattgttcgc cacaaatctt
     9421 gataaacgtc tcagaaatct gaccgcttgc aagtgatgag ttaagaaaac tagctacttg
     9481 ctcatcgtta gcgacggcgg cagaaaaagt taacatctgc tgccattgtt ccaattgacc
     9541 ttgttctaaa gcaaaatcga aagccgcttt agcatagggg cgagctactg tgcttaattc
     9601 tgacatctgc ccctcctagt tatagttccg caactagctt atcaataata tcgttgttcg
     9661 cagcggcatc caccgaacga cccacgattt tttctgcacc agcaatagcc aatgcagcca
     9721 ctttttgacg aagctcttct tgaacgcgtt tacgttcgct ttcaacttcc gcgtaaccct
     9781 gttcaataat acgttgacgt tccacttcag cttctgcttg tacagattct aaaatttcat
     9841 tacgacgttt tgttgctaaa tcaatgatat tttgtgcttc ttctttcgct ctaaggattt
     9901 cttgatccgc agccgcttta gaatcagctt gttcttgttt cgctttttcg gcagaagcca
     9961 atgcgctagc aatatttgcc tgacgctctt ctatcactcg aattagcggt ggccatacaa
    10021 acttcataca gaacgcaaca aaaagtgcga acgcaatcag ttgaccaatt agtgttgcat
    10081 ttaaattcac aacgccctcc taaaagccgg taaagttatt caactgaata acggttaatc
    10141 aaatcccgac ttatttcaat aaatcaatga acgggtttgc gaagatgaat agtaatgaaa
    10201 tacctacagc gatcattgcg atagcatcta aaagaccagc aacgataaac attttagttt
    10261 gtaagcttga tgctaattcc ggctgacgtg cagatgactc taagaatttg ccacctaaga
    10321 tagcaaagcc gatagcagta ccaagagcag cgaaagctaa taaaattgaa gcaccaataa
    10381 ttgttgctgt gattactgat tccataatgt tctccattag attgaggaat tagcccgaag
    10441 gctgggttgt tgataaaaat acatatcaag cggtcaatat tttgcaaaaa tttgcgaaaa
    10501 acctaccgct tgtaaggcta gtttaatgat ccgctttgtt ataagcgata ctcaaataaa
    10561 caatcgttag catcataaaa ataaaggctt gaagcgtaat aactaaaata tggaaaatcg
    10621 cccaaaccaa gtgtaatgga atccccaacg cctgtagagc gaagttgtct gccatataca
    10681 ttactgcaat aaggataaag attaactcac ctgcatacat attaccgaat aaacggaacg
    10741 ccaatgaaat cggttttgcc aaaagcgtta ccgtttcaag aataaagttt accggaatga
    10801 atgcccagtg gttaaacggg tgtaacgtgt attctttcac taaaccgcca aaacctttcg
    10861 atttcaccgt gtaaaataaa attaacgcaa atacacaaat agacataccc agtgttgcac
    10921 taatatctgc cgttggtact gcacgcaaat agtgaatacc aaacagattg gctaactgtg
    10981 gtaagaaatc gaccgggata aggtcgatcg cattcataat aaacacccaa cagaaaatcg
    11041 ttaatgctaa tggtgcaatt acattgcgag gtccgtggaa gttatccttc actaaaccgt
    11101 ttacccactc aataacaatc tcaacaaaac attgcaattt tcccggaacg cccgttgttg
    11161 cattttttgc tacacgcgag aacacccata aaaaaatcgc acctgccact aaagagaaga
    11221 acagtgtatc taaatgcact gcccaaaagc cttcacctgt cgataaaaaa ctcaagtgat
    11281 ggctaatata ttctgctgtc gttccagcca taacatatcc ttttaaatta aaattagtgg
    11341 tgatgtttgc ttaatacaaa cgggatcata ttatttaaaa ataatgcgat aaaataaccc
    11401 acgaaaaaca acacaacatc tagagcaggg ataagtttaa aacagccgat caccaaaata
    11461 atagtaacca accatttcat tccttcacca cgatagaaag cggtcatttt tgactgattt
    11521 tttgcagatt tcttaaagaa aacccaatat acaaacacaa gatgaggcaa aaaactcgct
    11581 aaagcaccgc ctagaaagga aaaattaaaa ttcattttcc ataaagacac tccaagtgca
    11641 aaaacgcaca agagaaaaaa ttcaaccttt aatgcttgtt tatattgtga ttttgctcta
    11701 ttgattacag ctgacacatt ttatcctttt tgaataagta aaccacacaa tcaggctaat
    11761 aattagccac tgttgaatca aagaaaatcc gtgctaaatt atactttaca aatgaattgt
    11821 tgcaaccgaa aagcgacaca aaaacttgtt attcttcaca tttttgaaaa aaaattttat
    11881 ttacgttgca tttttttgag taaaaccatc aaaatcagtt aa
//
LOCUS       DANLXD010000083        11826 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.083, whole genome shotgun sequence.
ACCESSION   DANLXD010000083 DANLXD010000000
VERSION     DANLXD010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11826)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11826)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11826
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.083"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            20..367
                     /locus_tag="PXD18_001902"
     CDS             20..367
                     /locus_tag="PXD18_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302302.1"
                     /translation="MFREEAIEYQSKKWKSTAVLFSRVPALVVFSISFFIFTAFILFI
                     VFGNYTRRETVVGELVMQSHPILLSAPKSGYISENYIQPHQQVKKRAIRWLKLRWIEL
                     RIAKILMLILFFR"
     gene            364..1281
                     /locus_tag="PXD18_001903"
     CDS             364..1281
                     /locus_tag="PXD18_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HDL6302303.1"
                     /translation="MKSQIQATEQAITALYKNKSETINSLEKQIKNSQKIYQDKQSYL
                     VEIEKSMNDYAELVKRYEKLLKVGHSSHDEVNIQKSRYFQQKSLFNELKQELIQLKST
                     QLSLENEIETRKTEFNNQIIRYEMQKSDLNIRLMEFESVSDIIVNASLDGKIESTSVT
                     VGQIIKENDPLAQILPQNKGNYQLVMWVPNSAISFIKQGDEVNIRYEAFPFEKFGQFK
                     GKITSISTLPASLQELSFYKNLPVNLEQGIPLYKILIELADQNVKYNDTSLYFMSGMK
                     AEATLFLEKRKLYEWIFFPMYQLRKNMEQ"
     gene            1281..2072
                     /locus_tag="PXD18_001904"
     CDS             1281..2072
                     /locus_tag="PXD18_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase C39"
                     /protein_id="HDL6302304.1"
                     /translation="MTGIKQLKFDFRRRIPVILQTETAECGLACLAMMLGYYDKNTNL
                     FELRSQYGTSSRGVTLHTLISIANDCGLITRPLSLELDEVPQLRLPCILHWDFNHFVV
                     LTHASEKQFIIHDPAFGKRKLSRAEFSNHFTGVALEVWSEVKFEKSNNENTISLYETL
                     KHISGIKGALVKIFALSMLIELIALLMPIGTQLVMDHVMQAKDQSLLLIICIGLFLFT
                     LFRTMVSMFRAWVSLKMNYLIDFQWTASFFSHLLKLPLDFFENAK"
     gene            2450..3367
                     /locus_tag="PXD18_001905"
                     /pseudo
     CDS             2450..3367
                     /locus_tag="PXD18_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014167835.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(3369..4037)
                     /locus_tag="PXD18_001906"
     CDS             complement(3369..4037)
                     /locus_tag="PXD18_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDL6302305.1"
                     /translation="MKYLYALIFSLFFSSVYAAERQLQCKVVGISDGDTLTCLVNKTP
                     LKIRLQHIDAPEQAQPYGNKAKQALAQFVFQQNITAIVSGYDRYQRLLATLYLNDKNI
                     NLALVENGMAWAYTTKREYIEAQDQAQQAKIGLWQDKFPINPSQWRKTHTSTLPQAVK
                     KPENIANQPPTIDCQIKLSCNQIGNYAQAKRYFQQCGWKELDGNNDSIPCNKLYRQEQ
                     KNRN"
     gene            complement(4081..5448)
                     /locus_tag="PXD18_001907"
     CDS             complement(4081..5448)
                     /locus_tag="PXD18_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HDL6302306.1"
                     /translation="MSIDTILNQINSFVWGPPLLILISGVGLYLTFSLKGIQLSQLGQ
                     AFRYMFKPEKGKGQSGDISAFAALSTALAATIGTGNIVGVATAIHSGGPGALFWMWLI
                     ALFGMATKYAEGLLAIKYRTKDRAGFVAGGPMYYIELGMGKKWRWLAKAFAFFGVLVA
                     LLGIGTFPQVNGITHALESTFDVPIIFSAIILTLIVTAIILGGVQRISKIATIVVPFM
                     AIGYVIAALSVILLNMEKVPQAIITIVHAAFNPQAALGGAVGFTVMQAIQLGVARGIF
                     SNESGLGSAPIAAAAAQTKEPVRQGLISMTGTFLDTIIVCTMTGLVIVISGAWAGDVK
                     GAELTTTAFTQGLNSSFGAIIVTVGLVFFAFTTILGWCYYGERCFVYLTRGRTQYIKL
                     YRLLFIALIASAPFLQLDTIWTLADIVNGLMAFPNLIALIALRKVIISETKDFFARLK
                     TGKAE"
     regulatory      complement(5567..5662)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            complement(5833..6885)
                     /locus_tag="PXD18_001908"
     CDS             complement(5833..6885)
                     /locus_tag="PXD18_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDL6302307.1"
                     /translation="MTHSTKTLVAIASIIIILAGIKLSNEIVVPFLLSLFIAIICSPM
                     IKFMTKRKVPLWLAITILLIVFILGFSFLAGIINNTLQEFTNAIPQYKIQLSSRIQVI
                     LELAHRWHIPLTLSQEEIMSKFDPSSIMNLVSKLLMGLSGALSNIFVIFLVVIFMLLE
                     MPVAKYKLALALSPDDDLSNEKEYINQVLEGVIGYLGVKTFVSLLTGGLVWILLEILG
                     VEYAILWAILTFLLNYVPNIGSILAGIPIVIQALVLNGFSIGLGTLIGIVVINMVVGN
                     ALEPKLMGKKLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMACKVALESNKATQKYA
                     VLFSDLEEVPKEQKYR"
     gene            complement(6932..7357)
                     /gene="ruvX"
                     /locus_tag="PXD18_001909"
     CDS             complement(6932..7357)
                     /gene="ruvX"
                     /locus_tag="PXD18_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HDL6302308.1"
                     /translation="MTETTTKTVIAFDFGTNSIGCAVGQSITGTAQGLTTFKAQDGIP
                     NWEEIGKLLQDWKPDMLVVGLPLNMDGTEQPLTQRARKFANRLNGRFNLPVELQDERL
                     TTVEAKAEIFSRGGYKALKKDKVDSISACLILESWFENH"
     gene            complement(7357..7917)
                     /locus_tag="PXD18_001910"
     CDS             complement(7357..7917)
                     /locus_tag="PXD18_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HDL6302309.1"
                     /translation="MLENLQGKFLIATPEMDDDYFERTVVYICEHNPQGAMGVVINTP
                     TDLSVLELITRMDFQMANQRDYKKDQMVLSGGPVNQDRGFIIHTKTANDFIHTYPITD
                     KITLTTSGDVLDSFGTLASPEKFIVCLGCSTWRGSQLEQEIAQNYWIVSDANEKTLFE
                     TGYLERWAEAYEMMGLSSIPSRAGRA"
     gene            complement(7917..8648)
                     /gene="rsmE"
                     /locus_tag="PXD18_001911"
     CDS             complement(7917..8648)
                     /gene="rsmE"
                     /locus_tag="PXD18_001911"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HDL6302310.1"
                     /translation="MRIPRIYQPQPLAGLQSCVLSEDAANHVGRVLRMKQGEQIILFD
                     GSNHVFHATLQAVEKKQIIAKIDSSELDDRESNLPIHLGQVISRGDRMEFTIQKSVEL
                     GVKTITPLWSERCGVKLNDERQDKKLQQWQKIAIAACEQCGRNEIPEIRPIMKLTDWC
                     KEQDDMLKLNLHPRAKYTIRELPNVPKAGVRLLIGSEGGLSAEEIAMTESEGFTEVLL
                     GKRVLRTETASLAAITALQVCFGDI"
     gene            complement(8708..8998)
                     /locus_tag="PXD18_001912"
     CDS             complement(8708..8998)
                     /locus_tag="PXD18_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6302311.1"
                     /translation="MPKKLHNIYYTEEALIDLENIAISVSEFTGYASSGIRILEELEN
                     SINNLAIFPTMGVKGAIINTRELYHNGYRIVCEVKENEISIITIVHCSRLYP"
     gene            complement(8979..9152)
                     /locus_tag="PXD18_001913"
     CDS             complement(8979..9152)
                     /locus_tag="PXD18_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302312.1"
                     /translation="MNNPYHNVSQEYLDYLAKKVKQGKEDIKNGRIYSPEEVRKRVIA
                     AAFRGAENAKKVA"
     gene            complement(9324..9911)
                     /locus_tag="PXD18_001914"
     CDS             complement(9324..9911)
                     /locus_tag="PXD18_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302313.1"
                     /translation="MKRSKKTLVLATTFVAALLAGCQSQSNTLTFSTPTPTAVFNTNN
                     QTAAVNVMTQDLRTSREIASYTKNGEVIRLTAVPEVAAMFQQAVQQDLNAKGFQIVQG
                     AANANVVVNIRKFFATVEQGNLRYKADAQVSVKVAVQGSKGNFSKNFNATRGYEGAFG
                     ASNDEIKKVLDQAYSDVVKAIYNDNEIANAIHQFK"
     gene            10003..10314
                     /locus_tag="PXD18_001915"
     CDS             10003..10314
                     /locus_tag="PXD18_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA/IbaG family iron-sulfur metabolism protein"
                     /protein_id="HDL6302314.1"
                     /translation="MSVEQTIIQKIKTEFQPIFFNVENESYMHSSGRGAESHFKLTLV
                     SDKFEGQRTVARHRAVYACLAEELANGVHALALHLYTQGEWEATGGLVPKSLNCLGVG
                     Q"
     gene            10406..10495
                     /locus_tag="PXD18_001916"
     tRNA            10406..10495
                     /locus_tag="PXD18_001916"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10440..10442,aa:Ser,seq:gga)
     gene            complement(10671..11045)
                     /locus_tag="PXD18_001917"
     CDS             complement(10671..11045)
                     /locus_tag="PXD18_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein NlpE N-terminal
                     domain-containing protein"
                     /protein_id="HDL6302315.1"
                     /translation="MKKIALIGFTTAMLGACSLLPQKSVSGTYAGELPCADCEKIQAQ
                     LTLNADKTYQYDTVYFKDKKEYTYRDKGTYSWEPNKPNVIRLEKASGNLAFQVSEQHV
                     ELCDPNGNTVKNSNNYKLGKVR"
     gene            complement(11070..11372)
                     /locus_tag="PXD18_001918"
     CDS             complement(11070..11372)
                     /locus_tag="PXD18_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HDL6302316.1"
                     /translation="MKNSAPKKINDILQNSSLSRIVEKANFINDLNQKIQKRWPESYR
                     GLYRVVNLVDNQLIVSVKNATVRQGLILQQNMLLKQIQTDLPEITQLEFRVNPSVT"
     gene            11493..11813
                     /locus_tag="PXD18_001919"
     CDS             11493..11813
                     /locus_tag="PXD18_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2547 family protein"
                     /protein_id="HDL6302317.1"
                     /translation="MSLFLKHFHRTPFWSQLFLGMVAILALPEIQVAYANESEQETVL
                     NQSFLQYAQSANDIEQQSLFIAELIHKIVEIKPQAVHFCEFFANSYRLDRQNAYPIRA
                     GPQT"
BASE COUNT         3496 a         2237 c         2297 g         3796 t
ORIGIN      
        1 agtgtaaaat tggtattata tgttcagaga agaagctatt gaatatcaat cgaaaaaatg
       61 gaaaagcaca gctgtactat ttagcagagt tccagctttg gttgtctttt ccatttcttt
      121 ctttatcttt actgccttta ttctatttat tgtgtttggt aattataccc gccgtgaaac
      181 ggttgtgggt gaattagtga tgcaatctca tccgatttta ttatctgccc caaaatccgg
      241 ctatatatcc gaaaattata ttcaaccaca tcagcaggta aaaaaaaggg cgatccgctg
      301 gttaaaatta cgctggatag aattacgcat agcgaaaata ttaatgttaa ttctattctt
      361 tcgttgaaat cacaaattca agcaacagaa caagcgataa ctgctttata taagaataaa
      421 tcagaaacta ttaatagcct tgaaaagcag atcaaaaaca gtcaaaaaat ttatcaagat
      481 aagcagagtt atttagtgga aattgaaaaa agtatgaatg actatgcgga gttggttaaa
      541 cgctatgaga aattattaaa agtagggcat tccagccacg atgaagtgaa tattcagaaa
      601 agccgttatt tccaacaaaa atcactgttt aatgagctaa agcaagaatt aattcaatta
      661 aaatccaccc aacttagctt ggaaaatgaa attgaaaccc gtaaaaccga atttaataat
      721 cagattattc gctatgaaat gcaaaaaagc gatttaaaca ttcgtttaat ggaatttgaa
      781 tctgtttcag atattattgt taatgcctct ttagatggaa aaattgaaag taccagcgta
      841 acagttgggc aaattattaa agaaaatgac ccgcttgcac aaattctgcc acagaataaa
      901 ggaaattatc agctagtgat gtgggtaccg aatagtgcca tttcatttat taaacaaggc
      961 gatgaggtga atattcgcta tgaggctttt ccgtttgaaa aattcgggca gtttaagggc
     1021 aaaattacgt caatttcaac cttaccagct tctttgcaag aacttagttt ttataaaaat
     1081 ctccctgtaa atttagagca aggtattccg ctttataaaa ttctgattga gcttgccgat
     1141 caaaacgtaa aatataatga tacctccctt tattttatga gtggaatgaa agccgaagcc
     1201 acgttatttt tagaaaaacg taaactgtat gagtggatat ttttccctat gtatcaatta
     1261 cgcaaaaata tggagcaata atgacaggaa ttaagcagtt aaaatttgat tttcggagaa
     1321 gaatacctgt tattttgcaa actgaaacag ctgaatgtgg cttagcctgt ttagcgatga
     1381 tgttgggcta ttacgataaa aacaccaatt tatttgaatt gcgaagtcaa tatggtactt
     1441 cctctcgtgg cgtaacgctg catactttaa tttctattgc aaatgactgt ggtttaataa
     1501 ctcgccctct ttctctagag ttagatgaag taccacaact tcgtctgcct tgtattcttc
     1561 attgggattt taatcatttt gtagtattaa ctcacgcaag tgaaaaacag tttattatcc
     1621 acgatcctgc tttcggtaaa cgtaaattat cccgtgctga attttccaac cattttaccg
     1681 gagtcgcttt agaagtttgg tctgaagtta aatttgagaa aagcaacaat gaaaatacca
     1741 ttagtttgta tgaaacctta aagcatattt ctggcataaa aggtgcatta gtgaaaattt
     1801 ttgccctttc aatgctcatt gaactcattg ccttattgat gccaattgga acacagttag
     1861 tgatggatca cgttatgcaa gcgaaagatc aatcattact tttaattatc tgtattgggc
     1921 tatttttatt tacccttttt cgcacaatgg tcagtatgtt tagggcttgg gtttccttga
     1981 aaatgaatta tttaattgat tttcaatgga cagccagttt cttttctcat ctcttaaaat
     2041 taccgcttga tttctttgaa aacgccaagt aggtgatatt cattcccgat ttagttcatt
     2101 aaaaaccatt cagaaaactc taacttcaag cattattacc acgattattg atacgattat
     2161 gataatcagt ttaattatta tgatggtgtt atatggcggt tggctctttt gggtagtatt
     2221 agctttttcc tttatctatt ttattcttcg aatggttact tatttagttt atcgtcaact
     2281 gaatgaagag cagattatta aaggagcaaa agcccattcg cattttatgg aaactttata
     2341 tggtattaca acgttaaaat cattaggatt ggaaaataaa cgacaagaac agtggatgtc
     2401 gctcaatgcg gatgctttta acacatcaat taaggtaact aaatttgata tgctgttttc
     2461 cggtattcat acctttattt ctaccatcga acagatttta attctttgga ttggggcgac
     2521 aatgatgatt gaaaatgtga tgacattagg aatgtttgtc gcttttaatg cctatcgagg
     2581 ctctttctct tcacgaatgg ggaatttaat tgatattatt tttagcctaa aaattctttc
     2641 attacataga gagcggattg cagacattgc tttaaatgaa gtcgaagatg aaagtaaata
     2701 tcaagaactc agatttgaac ataaccaaac agatatagaa gttaaagacc tttgtttcaa
     2761 atacgatcct ttttctaaaa atgtgcttga aaatgtcaat ttagtgatca gaagtgggga
     2821 aagtgttgct attaccgcac catcaggtta tggcaaaaca acgttattaa aattaattgc
     2881 aggtttatta aaaccaacct caggttctgt gtattttaac ggcattgata tttatcagtt
     2941 aggattaagt caatatcgga gccaaattgc ttgcgtatta caggaagata aattcttttc
     3001 tggttccatt ttagagaata ttgttagttt tgaaagtaat tatgatcgag aatgggctat
     3061 cgaatgtagc aaacttgcga atattcacaa tgatattatg gcaatgccga tgaattatga
     3121 aaccttatta ggagaattag gaaataattt gtctggcgga caaagataac gattgtttat
     3181 tgctcgagct ttatataaaa agcctaaaat tcttttgatg gatgaggcga ctagccattt
     3241 agatgaagaa aatgagaagc ttgtcaatca agctatttca cgaatgaaga taacaaggat
     3301 tattattgct catagacaat cgactattca gtcggcggat agaattattg ccctgaatga
     3361 caggtaaatt aattcctatt tttctgttct tgccgataaa gtttattgca cggaatgctg
     3421 tcgttgttgc cgtctagctc tttccagccg cattgttgaa agtagcgttt tgcctgtgcg
     3481 taattgccga tttggttgca gcttaattta atttggcaat caatcgttgg tggctggttt
     3541 gcaatatttt ccggtttttt gaccgcttgt ggtaaggttg aggtgtgtgt ttttcgccat
     3601 tggctcgggt taatcgggaa tttgtcctgc cataagccga ttttagcttg ctgtgcttga
     3661 tcttgtgctt cgatatattc ccgctttgtg gtgtaagccc acgccatacc gttttccact
     3721 aaggctaagt tgatgttttt atcgtttaag tagagggtgg caagtaatcg ttggtaacga
     3781 tcatagcctg aaactatggc agtaatgttt tgttgaaaca cgaattgagc cagagcttgt
     3841 ttggctttgt tgccgtaagg ctgcgcttgt tcgggggcat caatatgttg tagccttatt
     3901 tttagtggtg ttttattgac caaacaagtg agggtgtcgc catcgctaat gccaacgact
     3961 ttgcattgta gttggcgttc ggcggcatat accgatgaga aaaataagct aaaaatcagg
     4021 gcgtaaagat atttcattat taaaaaagag agggctaata agccctcatt ctatcatttt
     4081 ttattcggct ttacctgttt taaggcgagc gaagaaatct tttgtttcac taataatcac
     4141 tttgcgtaac gcaatcaatg cgattaaatt cgggaatgcc attaagccgt tcacgatgtc
     4201 tgccagcgtc caaattgtat cgagttgtaa aaatggagca gaggcgatga gtgcaataaa
     4261 cagcaagcgg tataatttaa tgtattgggt gcgacctcga gtgagataga caaaacagcg
     4321 ttcaccgtag tagcaccagc ctaaaatggt ggtaaaggca aagaagacta aaccaactgt
     4381 cacaattatc gcaccgaatg agctgtttaa accttgagta aaagcggttg tggtgagttc
     4441 tgcgcctttt acatcgcctg cccaagcccc tgaaatcaca attactaagc cggtcattgt
     4501 gcagacgata atagtgtcta agaacgtgcc ggtcattgaa attaggcctt gacgtaccgg
     4561 ctctttggtt tgggcggcag cggcggcgat gggggcagag cctaatcctg attcattcga
     4621 gaaaatacca cgtgcaaccc ctaattgaat cgcttgcatg acggtgaatc cgactgctcc
     4681 gcctaatgcc gcttgtgggt tgaaagctgc gtgtacaata gtaataattg cttgtgggac
     4741 tttttccata ttcagtagaa tgacggataa agcggcgatg acatacccaa tagccataaa
     4801 cggtacaaca atggttgcaa ttttagaaat ccgctgcacg ccacctaaaa taatagcggt
     4861 aacgataagg gttaaaatga tcgcactgaa gataatcggc acatcaaagg tgctttctaa
     4921 ggcgtgggta atgccattca cttgggggaa cgtgccaata ccaagcaaag cgaccaatac
     4981 gccaaaaaac gcaaaggctt tagcaagcca acgccatttt tttcccattc ccagttcgat
     5041 atagtacatc ggaccaccag ccacaaatcc ggctctatct ttagttcgat atttaattgc
     5101 caataagcct tcggcatatt tcgtagccat accgaataag gcaatcagcc acatccaaaa
     5161 taatgctcca ggcccgcccg aatgaatagc ggttgccacg ccgacaatat tccccgtgcc
     5221 gatagtagct gctagggcag tggaaagggc tgcaaaagcg gaaatatcgc ccgattgccc
     5281 tttgcctttt tccggtttga acatatagcg aaaggcttgc cctagttggc ttaattgaat
     5341 acctttgagt gaaaaggtta aatataaccc tacgcctgaa attaaaatca ggagtggcgg
     5401 gccccaaaca aaactgttga tttgattaag aatagtgtcg atagacattt gatgttcctc
     5461 gtaaaaactg cttacaagga aagaaaagga atgcaagaga caagcggtca aaaaacggaa
     5521 attttttgca aagaattagc aaaaaaacac cgcttgtatc gtataacttt tctcccctgt
     5581 ccttttgcct gagcgtttca cacattgctg tattttcgcc ttcggcggcg gattttaatc
     5641 cgctctctcc aagggttcgt ccagtaacag tccccgcagt gttcactgca cctgaaagag
     5701 tttacctcgt cggtgaaatg ttaattcatt tctctccagc taccttcatc cgaacaatct
     5761 aatttatttt ataatgtaaa ataaaaaaga tttgccaaat tctagcaact cttttgcttc
     5821 cgtcaagtga atttaacgat atttttgttc tttcggtact tcttctaaat cgctaaataa
     5881 tacggcatat ttttgggtgg ctttattgga ttctaatgcc actttacacg ccatcgtaag
     5941 tggaacagaa agtaacattc ctacggtgcc aagtaaccac ccccaaaata gaagtgagag
     6001 gaacactaca agggtagaaa gcccgagttt cttgcccatt aatttaggtt caagcgcatt
     6061 acccacaacc atattaatca cgacaatgcc gattaaagtg cctaatccta tagaaaagcc
     6121 attgagtacc aaggcttgaa tcacaattgg aattcccgcc aaaatagagc cgatattcgg
     6181 gacgtagtta agcaggaagg ttagaattgc ccataaaatc gcatattcta cgcctagaat
     6241 ttctagtaag atccaaacta accctccggt gagtaggctc acaaaggttt taactccaag
     6301 gtaaccaatc accccttcaa gtacttggtt gatatactct ttttcgttgc ttaaatcatc
     6361 atctgggcta agtgcgaggg ctaatttata tttggcaacc ggcatttcca atagcataaa
     6421 aatgacgact aagaaaatca caaaaatatt cgataatgca ccggatagcc ccattagcag
     6481 tttgctgacc aaattcatta ttgagcttgg gtcaaatttg ctcataatct cttcttgtga
     6541 gagggtaagt ggaatatgcc atctatgggc gagttctaga atcacctgga ttctagatga
     6601 aagctgaatt ttgtattgcg gaatagcatt agtaaattct tgcaaggtgt tattaataat
     6661 gcctgctaag aaactgaatc ctaagataaa aacaataagt aaaatggtaa tggctaacca
     6721 taatggcact ttacgcttag tcataaattt gatcattggt gaacaaataa tggcaataaa
     6781 tagcgaaagt aaaaatggca caacaatttc attggataat ttaatccctg ccagaataat
     6841 gataatggag gctatcgcca cgagagtttt ggtggaatgt gtcataattt ttccttttac
     6901 aagcggttaa aaatcagcaa ttttttacaa attagtgatt ctcaaaccaa ctttctaaaa
     6961 ttaaacaagc ggaaatggaa tccactttat ccttttttaa tgctttgtaa ccaccacgag
     7021 aaaaaatttc cgcttttgct tcaacagtag tgaggcgttc atcttgtagc tcaaccggca
     7081 gattaaagcg tccgtttaag cgattggcaa attttctggc acgctgagtt aaaggctgct
     7141 ctgtgccgtc catattcaag ggtagcccaa caaccagcat atctggtttc caatcttgca
     7201 agagttttcc gatctcttcc cagtttggaa taccgtcttg ggctttaaat gtagttaaac
     7261 cttgagctgt gccggtaata ctttgtccaa ctgcacagcc gatgctattt gtgccaaaat
     7321 caaaggcaat cacggttttt gttgtggttt ctgtcattaa gctctcccag ctcttgacgg
     7381 tatgcttgaa agccccatca tttcataggc ttctgcccaa cgctctaaat aaccggtttc
     7441 aaacagcgtt ttttcattcg catcagacac aatccaataa ttttgagcaa tttcttgctc
     7501 aagctggctg ccacgccaag tggaacaacc taaacacaca ataaattttt caggtgaagc
     7561 cagtgtgcca aaggagtcta acacatcacc ggaggtagtg agcgtaattt tatcggtgat
     7621 cggataagtg tgaataaaat cattggcggt tttggtgtga ataataaagc cacgatcttg
     7681 atttaccggc ccaccgctta acaccatttg gtcttttttg taatcacgct ggttcgccat
     7741 ttggaaatcc attcgggtaa tcagctctag aaccgacaga tcggtaggag tgttaattac
     7801 tactcccatt gcaccttgcg gattatgttc gcaaatatag accaccgtac gctcgaaata
     7861 gtcatcgtcc atttccggcg tggcaattaa aaatttacct tgtaaattct ctaacattaa
     7921 atatctccaa aacaaacttg taacgcagta attgccgcaa gtgaggcggt ttctgtgcgt
     7981 aacactcgtt tacccagtaa tacttcagta aaaccttcgc tctcggtcat ggcgatttct
     8041 tcggcagata atccgccctc agagccaatc agtaaacgaa caccagcttt cggcacattc
     8101 ggcagttcac gaatggtata tttggctctt gggtgcaaat tcagtttcaa catatcgtct
     8161 tgttctttgc accagtcggt gagtttcata atcgggcgaa tttcagggat ttcatttcgt
     8221 ccgcattgtt cacaggcggc aatcgcaatt ttctgccatt gctgtaattt tttatcttgc
     8281 cgttcatcat tgagtttcac gccacaacgt tccgaccaaa gtggggtaat agtttttacc
     8341 cccagctcca ccgatttttg aatggtaaat tccattctat cgcctcggga aatcacttgc
     8401 cctaaatgga tcggcaggtt ggattctcgg tcatctaatt cacttgaatc aatttttgca
     8461 ataatttgct ttttttcgac cgcttgtaac gtagcgtgga aaacgtggtt tgaaccatca
     8521 aataaaatga tttgctctcc ttgtttcatt cgtagcactc gcccaacgtg gttagcggca
     8581 tcttcactta acacgcaact ttgaagacca gctaacggct gtggttggta aattcttggg
     8641 attctcataa ttatctagtt ataaattaaa ggcagacgat tgtctgccat aggtaagtta
     8701 aaacgggtta aggataaagt cttgaacaat gcacaatagt aataatcgaa atttcattct
     8761 ctttaacttc acacactatt ctatagccgt tatgatatag ttctctcgta ttaataattg
     8821 caccttttac acccattgta ggaaaaatgg ctaaattatt aatactattt tccaattctt
     8881 ctagtatcct aattccacta cttgcataac cggtaaattc actaactgag atggcaatat
     8941 tctctaaatc tattaaggcc tcttcagtat aataaatatt atgcaacttt tttggcattt
     9001 tcagcacctc taaaagcggc agcaataact ctttttctga cctcttcggg tgaataaatc
     9061 cgaccgtttt taatatcttc ctttccttgc tttacttttt tagcaagata atcaagatat
     9121 tcttggctaa cattatgata aggattattc atatttttcc tccctgcgat gagtctctat
     9181 tgtgggggct actgatcgtt taatcaagtt aatttatctt atttttcgag ccacatcaca
     9241 aaacgagaaa acaacaagcg gtcatttttc cacgtttttt gcaaaaaatc gaagaaagat
     9301 gaccgcttgc cagaaaaaat taattatttg aactggtgaa ttgcattggc gatttcatta
     9361 tcgttgtaaa tagctttcac cacatcagaa taggcttggt ctaacacttt cttgatttca
     9421 tcattgcttg caccaaatgc accttcgtaa ccacgggtag cgttgaagtt tttgctaaag
     9481 tttcctttag aaccttgcac tgccactttt acactcactt gtgcatcggc tttgtagcgt
     9541 aagtttcctt gttctactgt ggcaaagaat ttacgaatat tcactaccac attggcattc
     9601 gctgcacctt gtacaatttg gaaacctttt gcattcaggt cttgttggac ggcttgttgg
     9661 aacattgcag caacttcagg cactgcggtt aaacgaatga cctctccgtt tttagtgtag
     9721 cttgcgattt cacgcgaggt gcgtaaatct tgtgtcatta cattcaccgc agccgtttga
     9781 ttgtttgtgt taaatacagc agttggcgtt ggggtagaga atgttaatgt gttggattgg
     9841 ctttggcagc cggctagtaa tgcggcaaca aaagtagtgg ctaacactaa cgttttttta
     9901 gagcgtttca tagtaaatcc ttctatattg aataaatttc gagaaaattt ctgcttagta
     9961 tagtattatt tcgttttgat tttcaatgaa cgagagcaaa aaatgtcggt agaacagaca
    10021 attattcaaa aaattaagac agaatttcag ccgattttct ttaatgtcga aaacgaaagc
    10081 tatatgcaca gctcaggtag aggagcagaa tcgcatttta aattaacttt ggtgtcagat
    10141 aaatttgaag ggcagagaac agttgcacgt catcgtgctg tctatgcttg cttagctgag
    10201 gaattagcta atggcgttca cgcacttgct ttgcacctat atacccaagg tgaatgggaa
    10261 gcgactggcg gacttgtacc taaatcgcta aattgcttag gtgttgggca ataagtggat
    10321 aaaaatgatt tattttattt tgtgaagaaa atacttgaaa gagccgtgta aaattgctat
    10381 atttacgcca tctttttgtt gattcggtga gatgtccgag tggttgaagg agcacgcctg
    10441 gaaagcgtgt atatgggaaa ctgtatcggg ggttcgaatc cccctctcac cgccattcat
    10501 actgaaagat tccttactgt tttcatagat atttccttgg ttaagttaaa gtagataata
    10561 ctttttcatt tttaggttat ccccgagcaa acattgcttg ggggtttttt tatgcgatcg
    10621 gcgatagatt acaaagaaaa aggattccta agaatccttt ttatctgctt ttaacgtact
    10681 ttacctagtt tatagttatt gctgtttttt accgtgttgc catttgggtc gcaaagttca
    10741 acgtgttgtt cagacacttg gaaggcaaga ttgcctgatg ctttttccag acgaatcaca
    10801 tttggcttat tgggttccca actgtatgtg cctttgtctc ggtaagtgta ttctttttta
    10861 tctttaaaat ataccgtatc atattggtag gttttatctg catttaaggt tagctgggct
    10921 tggattttct cacagtcagc acacggtaat tcacctgcat aagtaccgct aacgcttttt
    10981 tgtggtagca atgagcaagc ccctagcatt gcggtggtaa aaccaatgag tgcgattttt
    11041 ttcatactat tttcctcttc aaaattaaat tatgtaacac tcggatttac tctaaattca
    11101 agttgggtta tttcaggtaa atcggtttgt atctgtttta gtaacatatt ttgttgcaag
    11161 attaaacctt gccgtacggt tgcattctta acgctcacaa taagctgatt atcaactaaa
    11221 ttcactactc ggtaaagccc acgataagat tctggccatc ttttctgaat tttttggttt
    11281 aaatcgttaa tgaagtttgc tttttcgaca atacggctta agcttgagtt ctgtaaaatg
    11341 tcattaatct ttttaggtgc tgaatttttc atctgtttct ttacatttcg tcttatttta
    11401 ggcttgattt tacgatactt gacccaataa tttactcatt cggctttact ttagcgtata
    11461 attagcccaa ttttttcatt tatcttaatt taatgagctt atttttaaaa cactttcatc
    11521 gaacgccttt ttggtcgcaa ctctttttgg gaatggttgc gatacttgct ttacctgaaa
    11581 ttcaggttgc gtacgccaat gaaagtgaac aggaaaccgt tcttaatcaa tcttttcttc
    11641 aatatgctca atccgctaat gatattgagc aacaatcgct ttttattgca gagttaatcc
    11701 ataaaattgt ggaaattaaa ccacaagcgg tgcatttttg cgaatttttt gcaaactcct
    11761 accgcttgga tagacaaaat gcttacccca ttcgagccgg gccacaaacc taaatataat
    11821 ttaatt
//
LOCUS       DANLXD010000084        11726 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.084, whole genome shotgun sequence.
ACCESSION   DANLXD010000084 DANLXD010000000
VERSION     DANLXD010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11726
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.084"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(63..857)
                     /locus_tag="PXD18_001920"
     CDS             complement(63..857)
                     /locus_tag="PXD18_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6302318.1"
                     /translation="MALLEVNHLNKRFVERSSLFHKQDFYAVKEVSFTLNRKETLAII
                     GENGAGKSTLAKMVAGMVGPTSGELIFRGTPLSFGDYKYRAKHIRMMFQDPNDAFDPN
                     YNIGQILDAPLRLATDLNEEERNERIFNTLKLVGMYPEQALVPISEASSGQKQRIAFA
                     RALILEPEIIIADDTINSLDFSVKTQLINLMLSVQQRQGIAYIYVGQNLGLIKHIADK
                     IMVMQSGEVVEYGLTKEVLLNPQHQITKRLIESHFGKHLSSYAWAS"
     gene            complement(958..2034)
                     /gene="fbaA"
                     /locus_tag="PXD18_001921"
     CDS             complement(958..2034)
                     /gene="fbaA"
                     /locus_tag="PXD18_001921"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HDL6302319.1"
                     /translation="MSLLNIVKPGVVTGDDVQKVFAYAKEHNFAIPAVNCVGSDSVNA
                     VLETAARVKSPVIVQFSNGGAQFYAGKGIKPASGARADVLGAIAGAKHVHQLAEEYGV
                     PVILHTDHAAKNLLPWIDGLLEAGEKHFAETGRPLFSSHMIDLSEEPIEENMEICREY
                     LARMDKIGMTLEIEIGVTGGEEDGVDNSDVDESKLYTQPSEVLYVYDQLSPISPRFTI
                     AAAFGNVHGVYKPGNVKLKPSILGASQEYVSKERGLPAKSLDFVFHGGSGSSREEIRE
                     AISYGAIKMNIDTDTQWAAWDGILQFYKANEAYLQGQLGNPTGPDAPNKKYYDPRVWL
                     RKMEESMSKRLEQSFEDLNCVNVL"
     gene            complement(2131..3306)
                     /locus_tag="PXD18_001922"
     CDS             complement(2131..3306)
                     /locus_tag="PXD18_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HDL6302320.1"
                     /translation="MSVIKMTDLDLAGKRLFIRADLNVPVKDGKVTSDARIVATIPTL
                     KLALQKGAKVMVTSHLGRPTEGVFEEENSLQPVVDYLNASDLGVPVRLVRDYLDGVEV
                     NENEIVVLENVRINKGEKKNDPELAKKYASLCDVFVMDAFGTAHRAEGSTYGVAEYAP
                     VACAGPLLAAELDALGKALKEPQRPMLAIVGGSKVSTKLTVLDSLSKIADQLIVGGGI
                     ANTFIAAEGHAVGKSLYEEDLIPEAKRLAQVTNIPVPVDVRVGTEFSETAPATEKAVS
                     EVRADESIFDIGEKSSEQLAEIIRNSKTILWNGPVGVFEFPNFRKGTEVISNAIAEAT
                     ANGAFSIAGGGDTLAAIDLFGIKDKISYISTGGGAFLEFVEGKVLPAVEILEKRANG"
     gene            complement(3561..4919)
                     /locus_tag="PXD18_001923"
     CDS             complement(3561..4919)
                     /locus_tag="PXD18_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDL6302321.1"
                     /translation="MANQQQERQSWSNRLAYIMTVAGATVGFGATWRFPYLVGEHGGG
                     AYVFLFCIAMIVIGIPMILVENVIGRRMRVNAIDAFAGFANGKKIASGWKILGYMGLL
                     GAFGILAYYMVLGGWVLNYIGSLLTGTLDLSQPVTVGTTQQFFQQSIFNSPMTIIAYT
                     ALFVLVNYFILVKGIVDGIERSVKYLMPILFIFLIVMVVRNITLPGAAEGIAFYLMPD
                     FSKITPKLFVFVLGQVFFALSLGFGVLITLSSYLDKSENLVKTATITGVMNTLIAVLA
                     GFMIFPSLFSFGVAPNSGPTLVFQSLPIVFSNMWGGTVFAVIFFSLLVVAALTTSLTI
                     YEVIITALQEKAKISRQKAIFITLATIFLLGNIPSALSDNILQDVQVMGKSIFDAFDY
                     ISGNILFILTALGSAIFVGFVLKEEAKEELGAGKMFTTIWFNYVRFVIPVIILVIFFN
                     SL"
     gene            complement(4989..5816)
                     /locus_tag="PXD18_001924"
     CDS             complement(4989..5816)
                     /locus_tag="PXD18_001924"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dam family site-specific
                     DNA-(adenine-N6)-methyltransferase"
                     /protein_id="HDL6302322.1"
                     /translation="MNHPKHRAFLKWAGGKYRLIPDIQTHLPKKACLVEPFVGAGSVF
                     LNTDFERYILADINPDLINLFNVVKADVEEYIAQTKQLFLHPQANTEAFYKARRAEFN
                     RSKDIFRRSVIFLYLNRFGYNGLCRYNQKKGYNVPFGRYKTHYFPEKELRFFAEKAQK
                     ATFVCADFEQVFELAKNQLTDYVIYCDPPYAPLAQETNFTQYAGGGFSLEQQGRLATL
                     ALEMKGLGVPVLISNHDTDFTRRIYQSADITQIQVQRSIGQKVGSRVKVGELFALFI"
     gene            complement(5830..6918)
                     /gene="aroB"
                     /locus_tag="PXD18_001925"
     CDS             complement(5830..6918)
                     /gene="aroB"
                     /locus_tag="PXD18_001925"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HDL6302323.1"
                     /translation="MLQVNVELKERRYPIIIGAGLLNQPASYSPLKSGDKVMIVSNPT
                     VATHYLSVVTNALKELGCHVDSVLIPDGEEYKTLESLNLIFTALLEKNHNRDTTLIAL
                     GGGVIGDVAGYAAASYQRGIRFIQIPTTLLAQVDSSVGGKTAVNHPLGKNMIGAFYQP
                     VSVIVDTNTLHTLSKREVSAGLAEVIKYGAIFDVTFFEWLEKHIDDLVSLKQDELEYC
                     IQRCCQLKADVVARDETEKGDRALLNLGHTFGHAIEARMGYGVWLHGEAVSVGMLEAA
                     ELSRILGDLSPQEVARLEKLLARANLPTISPDGMEPAEYLPYMWRDKKVLAGQLRLIL
                     LKSLGEAYVSSQATESQVLASIERFTQR"
     gene            complement(6942..7463)
                     /gene="aroK"
                     /locus_tag="PXD18_001926"
     CDS             complement(6942..7463)
                     /gene="aroK"
                     /locus_tag="PXD18_001926"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroK"
                     /protein_id="HDL6302324.1"
                     /translation="MAEKRNIFLIGPMGAGKSTIGRQLAQTLGMEFMDSDSVIEERAG
                     ADIDWIFDVEGEEGFRKREERILNELTQNYGIVLSTGGGSILSKDNRNVLSARGIVIY
                     LETTVDKQFERTQRDKKRPLLQTEDPRKTLEELAKIRNPLYEEIADITIHTDEQSAKV
                     VANQIIDMIDNLQ"
     gene            complement(7700..10264)
                     /locus_tag="PXD18_001927"
     CDS             complement(7700..10264)
                     /locus_tag="PXD18_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HDL6302325.1"
                     /translation="MRIAKIIFSALLSLLVLGGVIGGLLYMHFKSDLPDVATLKNVEL
                     QQPMQIFTLDGKLIGEVGEERRIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIM
                     RAIWRTSQGDTQGASTITQQLAKNFFLTPERSLERKAKEAILALEIEQVLSKNEILEL
                     YLNKIYLGYRSHGVAAAAKTYFNKSLKDLTLSEIAIIAGLPKAPSTMNPLYSVKRAED
                     RRNVVLGRMLETGDITKEEYEKAKAEPVVANYYGATLEFRADYVTEMVRQEIVKRYGE
                     NIAYNKGLKVYATVLSADQKAAQDALRENLIDYDRRHGWRGAEKLWTGSSAWDDEKII
                     DHLSKLPKSEPFTPAVVMQADKSKYTILLANGDISVLKRTNASFAPKGLKAGEQIWVR
                     QNKNREWALGQIPEVNSALVSINSENGAIESIVGGFSFEQSRFNRATQSLVQVGSAIK
                     PFIYTAAMNKGLSLSTTISDSPIVIKKKGQKEWRPKNADGVYGGPLRTRVALGKSKNM
                     VAIRILQMAGIDYVADYLQRFGFNRNQYVATESLALGAASFTPLEMARAYAVFNNGGY
                     LIEPYIIDRIIDAQGYELYQANPVVACNSCDSPVVYPEPKYFESVKIHDEAQVGVQTI
                     ANSSNNDDDDVVEDVGDSEPELQANNSEKNAPSLMAESSHHIKGLRYAPHVISDELAF
                     LMRSALATAITGEPEYGWRGTSYKMLNTIKRADVGGKTGTTNNAKATWYAGFGANIST
                     VVYVGFDDNKRVLGRGASGSSTALPAWTNYMKVALSDKPVEKSTLPKNIIEVNIDPNS
                     GFLGNGRKEYFIKGTEPTKRYIVERAYTEKAPQKTESAPLRLGLPPPGVLKSGELF"
     gene            10388..11086
                     /locus_tag="PXD18_001928"
     CDS             10388..11086
                     /locus_tag="PXD18_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComA"
                     /protein_id="HDL6302326.1"
                     /translation="MKLLKAHSKTPSNRIILGLSEDEQRYCLVKNKAEKFTVFWQAKP
                     ASIEELIGNLTPQEQAMMTLVRPIPYQYIWRKTVFMANTLNEAQLHRKVIHILKNEQP
                     LALDLLNIDYQRFPSSNDNLDKVVIYAVRKSYTENLSQFNSILDCELHCYARAIIHLT
                     QSQNNQPAPCFSFKQKYFQFTETELLILQTEPEDCIHLSDLKIDHLEIECEQEKQLYC
                     LALGASLWNGKVLI"
     gene            11062..11583
                     /locus_tag="PXD18_001929"
     CDS             11062..11583
                     /locus_tag="PXD18_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302327.1"
                     /translation="MEWQGIDLSANRKNNWFAGSDKGIKNVIYTLLLSALISLALIFL
                     YLQKNQEIQPLAQQLELVKTDILNIENKIISLNSNHTNTLPFAEPKKIAQLLAIIDNL
                     PLKNGGIETIQIYLETDLYLKIIGNLDNQSDFQSLESYLYQQDLFETKTEQINVNHKN
                     EIQFIFTLKHKGN"
BASE COUNT         3658 a         2575 c         1972 g         3521 t
ORIGIN      
        1 ctgcatattt attgaaatag gtcaaaatta tcaagtaatc atattagagc aggagtaaag
       61 atttagcttg cccaagcata ggaactaagg tgctttccaa aatgactttc aattaaacgt
      121 ttcgtaattt gatgttgcgg attcagtaaa acctctttcg tcaagccata ctctactact
      181 tcgccacttt gcatcaccat tattttatcg gcaatatgtt tgatcagacc taaattttgc
      241 cccacataaa tataagcaat cccttgtcgc tgctggacac ttaacattaa attaattaat
      301 tgtgttttga ctgaaaaatc cagtgaatta atcgtatcat ccgcaataat aatttccggt
      361 tctaaaatta aagcacgagc aaacgcaata cgctgctttt gcccactgga agcctctgaa
      421 ataggaacga gcgcttgctc aggatacatt cctaccaatt ttagcgtatt aaaaatacgc
      481 tcatttcttt cctcttcatt taaatctgtc gccaagcgga gcggagcatc taaaatttgt
      541 cctatattat aattaggatc aaaggcatcg ttagggtcct gaaacatcat acgaatatgc
      601 ttagctcggt atttataatc gccaaatgaa agcggtgttc ctctaaaaat cagttctcca
      661 gatgttggcc caaccatacc agcaaccatt ttagccaagg tagatttccc agctccgttt
      721 tcaccaataa tcgctaaagt ttccttgcga tttagggtaa aagaaacttc ttttaccgca
      781 taaaaatctt gtttatgaaa taggctacta cgttcaacaa aacgcttatt cagatgatta
      841 acttcaagta atgccataat aaattggtgc ttggaaataa agtgatagtt taccgcaaaa
      901 aataaataaa aaaagaccgc ttatacaagc ggcctgattt atggaatttt ttgcaaatta
      961 taaaacgttc acacagttta agtcttcgaa agattgctct aagcgtttag acatagactc
     1021 ttccatttta cgtaaccaaa cacgtggatc gtagtatttt ttgtttggtg catcagggcc
     1081 tgtcgggtta cctaattgac cttgtaaata tgcttcgttt gctttgtaga attgaagaat
     1141 accgtcccac gcagcccatt gggtgtcagt gtcaatgttc attttgattg caccgtagct
     1201 gattgcttca cgaatctctt cacgtgaaga accagaaccg ccgtggaaaa cgaagtctaa
     1261 tgactttgcc ggtaaaccac gctctttaga tacatactct tgtgaagcac ctaagattga
     1321 tggttttaat tttacattac ccggcttgta aacaccgtgt acgttaccaa atgctgccgc
     1381 aatcgtgaaa cgtgggctga ttgggcttaa ttggtcgtaa acatataaaa cttcagaagg
     1441 ttgggtgtaa agtttagatt catctacatc agaattatct acgccatctt cttcaccacc
     1501 ggttacgccg atttcgattt caagggtcat accgattttg tccatacggg ctaaatattc
     1561 acggcagatt tccatatttt cttcgattgg ctcttcagat aaatcgatca tatgtgaaga
     1621 gaataacgga cgaccggttt ctgcgaagtg tttttcgcct gcttcaagta agccatcgat
     1681 ccaaggtaat aagtttttcg cagcgtggtc ggtgtgaaga atcacaggca caccatattc
     1741 ttctgctaat tgatgaacgt gttttgcacc cgcaatcgcc cctaatacat ctgcacgagc
     1801 gcctgaagcc ggcttaatgc ctttacccgc atagaactgc gcaccaccat ttgagaattg
     1861 cacgattacc ggtgatttta cacgagcggc tgtttctaat acggcattaa ctgaatctga
     1921 acccacgcag tttactgccg gaatagcgaa gttgtgttct ttagcataag cgaaaacttt
     1981 ttgtacgtcg tcgcctgtta ctacacccgg ttttacgatg tttaataatg acattttttt
     2041 cttcctttgt atgaaatgtg caaaagcaca ttgttaaaat atacggccaa atcttgcaaa
     2101 attttcacaa aatttgaccg cttgtaactg ttagccgtta gctcgttttt ctaagatttc
     2161 cactgccggt aatactttac cttccacgaa ttctaagaac gcaccgccac cggttgaaat
     2221 gtaagaaatt ttgtctttga taccgaataa atcaatcgca gctaaggtat cgccaccacc
     2281 ggcaattgag aatgcaccgt ttgccgttgc ttctgcaatc gcatttgaaa tcacttctgt
     2341 tcctttacgg aagttaggga actcaaacac gccgaccgga ccattccaaa ggatggtttt
     2401 tgaattacgg ataatttcag ctaattgctc tgacgatttt tcaccaatat cgaaaattga
     2461 ttcatcagct cgtacttcac tcaccgcttt ttccgttgcc ggtgcagttt cagagaattc
     2521 agtacctaca cgcacatcaa ccggaacagg aatattggtt acttgtgcta aacgttttgc
     2581 ttcagggatt aaatcttctt cgtataatga tttacccaca gcgtgacctt ctgcggcaat
     2641 aaaggtattg gcaataccac cgcccacgat taattggtcg gcaatttttg aaagcgaatc
     2701 aagcacagtt aatttagtag atactttaga accacccaca atcgctaaca ttggacgttg
     2761 tggctctttt aatgctttgc ctaatgcatc taattcagcg gctaataacg gacctgcaca
     2821 cgcaacaggg gcatattctg ccacaccgta agttgaacct tccgcacggt gagctgtacc
     2881 gaatgcgtcc attacaaaca catcacaaag tgatgcatat ttttttgcta actcagggtc
     2941 gtttttcttc tcacctttgt taatacgcac gttttcaagc accacgattt cattctcgtt
     3001 tacttcaaca ccgtctaagt aatcacgcac taaacgaaca ggaacaccta aatctgatgc
     3061 atttaagtaa tcaactacag gttgtaaaga gttttcctct tcaaatacgc cttctgtcgg
     3121 acgacctaaa tgcgaagtta ccattacttt agcacctttt tgtaacgcta attttaaggt
     3181 tggaatggta gcaacaatac gggcatctga tgttactttg ccatctttta ccggtacgtt
     3241 aaggtcagca cgaataaata aacgtttacc cgctaaatca aggtcagtca ttttaataac
     3301 agacatagtt tgttcctctt tagattaaaa tttaaaagtg ataacggtcg gattatatca
     3361 gtttctaatc attttgggct aacctagatc aaataaatga ttaatttttt atcattttag
     3421 aatgctatta tcctgactgt tcttattccc ccccaatatg cttggttaat taagcaagaa
     3481 ttgcaaattc cccacaaaat ttaaccgctt gtcactaaaa ataaagctgt ttgaaaatcc
     3541 attcaaacag cttatagaat ttagagtgaa ttaaagaaaa tcaccaagat aatcaccgga
     3601 atcacaaagc gaacatagtt aaaccaaata gtggtaaaca ttttacccgc acctaattcc
     3661 tccttcgcct cttcttttag aacaaagcca acgaaaatcg cgctacctaa ggcggttaaa
     3721 ataaacagaa tattgccact aatataatcg aaggcatcaa aaatgctctt gcccataacc
     3781 tgcacatctt gcaatatatt gtcacttaat gctgatggaa tattacccaa cagaaaaata
     3841 gtagccaaag taataaaaat agctttttga cggctaatct ttgccttctc ttgcaatgca
     3901 gtgataataa cttcataaat agttaacgag gttgttaatg ccgccaccac taatagacta
     3961 aaaaagataa ccgcaaaaac tgttcccccc cacatatttg agaacacaat cggcaaactt
     4021 tggaatacta aagtcggacc tgaatttgga gcaacgccaa agctaaataa tgacggaaaa
     4081 atcataaaac cggcaagtac cgcaattaag gtgttcatca ccccagtaat tgttgctgtt
     4141 tttactaaat tctcgctctt atcaaggtag cttgaaaggg ttatcaacac accaaaacca
     4201 aggcttaatg caaaaaatac ttgacccagc acaaacacaa acaattttgg tgtgattttt
     4261 gaaaaatcgg gcatcagata aaaggcaatg ccttcagcag cccccggtaa ggtaatattt
     4321 cgaaccacca tcacaatcag gaaaataaac agaatcggca tcaaatattt cactgaacgc
     4381 tcaataccgt ccacaatgcc ttttaccaaa ataaaataat tcaccaatac aaaaagtgcc
     4441 gtataagcaa taattgtcat tgggctatta aaaatacttt gttggaagaa ttgttgggtc
     4501 gtgccaacgg taacaggttg agacagatct agtgtccccg tgagtaagct accgatataa
     4561 tttaataccc aaccaccaag taccatatag taggcaagaa taccaaatgc tccaagcaag
     4621 cccatatagc caagaatttt ccaacctgag gcaatttttt taccattagc aaaaccggca
     4681 aaagcatcaa tagcattcac tctcattcgg cgaccaatta cattctccac taatatcata
     4741 gggataccaa ttacgatcat cgcaatacaa aataaaaaca cataagcacc gcctccgtgt
     4801 tcccccacaa gataagggaa acgccaagtt gcaccaaaac cgactgttgc accagcaacg
     4861 gtcataatat acgccaatcg gttagaccaa gattggcgtt cttgttgttg atttgccatt
     4921 taatactcca tcggctaaca ataccgcttc aaccaacaag cggtcagatt tttagaaaat
     4981 attacaaatt aaatgaagag tgcgaataac tcgccaactt taacccttga gcccaccttc
     5041 tgccctattg aacgctgtac ctgaatttgg gtaatatcgg cagattgata aatcctacgg
     5101 gtaaaatcag tatcgtgatt tgaaattaat acgggaacgc ctaatccttt catttctaaa
     5161 gccagtgttg ccaaacgccc ttgttgctct aggctaaaac caccgccagc atattgcgta
     5221 aaattcgttt cttgtgctaa aggagcgtaa ggtgggtcgc agtaaatcac ataatccgtt
     5281 aattgatttt ttgccaactc aaagacctgt tcaaaatccg cacacacaaa agttgccttt
     5341 tgtgcttttt cagcaaaaaa acgtagttct ttttctggaa aataatgggt tttataacgc
     5401 ccaaagggaa cattgtaccc ttttttctgg ttataacggc aaagtccgtt atagccaaat
     5461 cgatttaaat acaaaaaaat caccgagcga cgaaaaatat cttttgagcg attaaactcc
     5521 gcacggcgtg ctttataaaa ggcttctgta ttcgcttgtg ggtgaagaaa cagttgcttt
     5581 gtttgcgcaa tatattcctc aacatctgct ttcaccacgt tgaaaagatt aatcaagtca
     5641 ggattaatat cagcaagaat ataacgttca aaatctgtat tcagaaagac cgaacctgca
     5701 ccaacaaaag gctcgactaa acaagccttt tttggcaaat gggtttgaat atctggaatt
     5761 aagcgatatt taccgccagc ccattttaaa aaggctcgat gcttagggtg attcatttca
     5821 ttttaaacat taacgttggg taaaacgctc aatagaggct aatacttgag attctgtggc
     5881 ttgcgatgaa acgtaagctt caccaagtga tttcaataaa attaggcgta attgacctgc
     5941 cagtactttt ttatctcgcc acatataagg tagatattct gccggttcca ttccatcagg
     6001 tgaaattgtt ggcaaattgg ctcgggccaa taatttttcc aagcgagcaa cctcttgagg
     6061 acttaaatcc cccagaatac gagataattc cgcagcctct agcataccaa ccgaaacagc
     6121 ctctccgtgt aaccatacac catagcccat acgtgcttca atggcgtgac caaaggtatg
     6181 tcctaagttt agtaatgcac gatctccttt ttccgtttca tctcgagcaa ccacgtcagc
     6241 ttttagctgg caacaacgct gaatacaata ttccagctca tcttgcttga gactgaccaa
     6301 atcatcaata tgcttttcaa gccattcaaa aaaagtaaca tcaaagattg caccgtattt
     6361 gatgacttcc gccaaaccag cactgacttc tcttttggat aaggtatgga gcgtattggt
     6421 atcaacaatc acagaaacag gctgataaaa agccccaatc atatttttac cgagtgggtg
     6481 gtttactgcc gttttcccgc ctactgaaga atcaacttga gccagtaaag tggtcggaat
     6541 ttgtataaaa cgaataccac gttggtaaga ggcagctgca tagcctgcaa catcaccgat
     6601 tacaccaccg cctaaagcaa ttaaagtggt atcgcgatta tgattttttt ctaataatgc
     6661 ggtaaaaatc aaatttaatg attctagcgt tttatattct tcaccgtcgg gaatcaatac
     6721 cgaatcaacg tggcaaccca gctcctttaa cgcatttgtt accacactaa gataatgtgt
     6781 cgccaccgtt ggatttgaga caatcatcac cttatctcca gattttaatg ggctataact
     6841 agcaggctga tttaataacc ctgcaccaat tataatcggg taacgacgct cttttaattc
     6901 cacattgact tgtaacatat cttagctcct ttcttacctg gctactgtaa attatcaatc
     6961 atatcaataa tttgatttgc cactacttta gcgctctgct cgtccgtatg aatagtaata
     7021 tctgcaattt cttcatacaa tgggttacgg attttcgcta actcttccaa cgttttacgg
     7081 gggtcttctg tttgcaataa agggcgtttt ttatctcgct gagtacgttc aaactgttta
     7141 tccactgtcg tttctaaata aataacgata ccacgagccg ataacacatt acggttatct
     7201 ttagataaaa tcgaaccacc gccagttgaa agcacgatac cataattttg cgtcagttca
     7261 tttagaatac gttcttcacg cttacggaaa ccctcttcac cttcaacatc gaagatccaa
     7321 tcaatatccg cacctgctcg ttcttcgatc acactgtcgg aatccataaa ttccatacct
     7381 aatgtttgag caagctgacg accaatcgta cttttacctg ctcccatcgg cccaatcaaa
     7441 aaaatattac gtttttcagc cattatttct tcttcatttt aaaatttact aaacatttga
     7501 tctgtgaaat taaaagaaaa aatgaccgct tgttctacaa gcggtctgat ttctttaaaa
     7561 aattgcaata aaactcattt attgactaag gaatatccaa atataactca caaatcgccc
     7621 aaaataaaat tggcacttat tatcgcaaga aatcccccta tttttcaact tttaagagca
     7681 ttatccttgt aataaattat tagaataatt caccgctttt tagcacccct ggtggaggta
     7741 atcctaaacg taacggcgca gattctgttt tttgaggcgc tttttcagta taagctctct
     7801 ctacaatata acgttttgta ggctcagtac ccttaataaa atactcttta cgtccatttc
     7861 ctaagaaacc actattaggg tcaatattaa cctcaataat attttttgga agggtacttt
     7921 tttcgacagg cttatctgac aatgcaactt tcatataatt tgtccaagct ggtaaagcag
     7981 tactagaacc tgaagcacct ctacctaata ctcttttatt atcatcaaag ccaacgtaca
     8041 caacagtaga aatattagca ccaaatcccg cataccaagt tgccttggca ttattggttg
     8101 taccagtctt cccgcccaca tccgctcgtt ttatcgtatt gagcatttta tagcttgttc
     8161 ctcgccagcc atattcaggc tcaccagtaa ttgctgtagc taaagcacta cgcattaaaa
     8221 aagcgagttc atcactaata acatgaggag cgtaacgtaa ccctttgata tgatgagaag
     8281 attctgccat taagctcggc gcatttttct cgctattgtt cgcttgtaat tcaggttctg
     8341 aatcgccaac atcttccaca acatcgtcgt catcattatt cgaggaattc gctatagttt
     8401 gtacaccgac ttgagcttca tcatgaattt tgactgattc aaaatattta ggctcagggt
     8461 aaacaactgg gctatcgcaa ctattacaag ctactacagg atttgcttga tataactcgt
     8521 agccttgggc atcaataata cggtcaatga tatatggttc aatcaaataa cctccattat
     8581 taaatactgc ataagctcga gccatttcta atggcgtaaa agatgcagca cccaatgcaa
     8641 gagattctgt tgcaacatac tgatttcggt taaagccaaa acgttgtaag tagtctgcaa
     8701 cataatcaat ccctgccatt tgtaatatac gaatagccac catatttttc gatttaccta
     8761 atgcaacacg agttctcaac gggccgccat aaaccccatc ggcattttta ggtcgccact
     8821 ctttttgccc tttcttttta atgacaatag gagaatcgct aattgttgtt gaaagactta
     8881 gccctttatt cattgccgct gtgtaaataa acggtttaat cgcagagcct acctgaacta
     8941 atgactgagt cgcacgattg aaacggcttt gttcaaagct aaagcctcca acgatagatt
     9001 caatggcacc gttttcacta ttaattgaca ctagggctga atttacctcc ggaatttgtc
     9061 ctaaagccca ctccctattt ttattttgac gtacccaaat ttgttcacct gcttttaacc
     9121 ctttaggtgc aaaagaagca tttgtacgtt ttaaaacaga gatatcacca tttgccaata
     9181 aaattgtata ttttgattta tctgcttgca ttacaacagc tggtgtaaac ggctctgatt
     9241 ttggcagctt acttaaatga tcgataattt tctcatcgtc ccaagcagaa ctacctgtcc
     9301 ataatttttc agcgcctcgc caaccatgac ggcggtcata atcaatcaaa ttttcacgta
     9361 acgcatcttg tgctgctttt tggtctgctg aaagtaccgt ggcgtacact tttaagcctt
     9421 tgttataagc aatattttct ccatagcgtt tcacaatttc ttgacgaacc atttctgtca
     9481 cataatccgc tcgaaattct aatgtcgcac catagtagtt agctactact ggctctgctt
     9541 tagctttctc atattcctct tttgtaatat ctccggtttc tagcattctc ccaagcacta
     9601 cattacgacg gtcttccgcc cgttttactg aataaagtgg attcatcgtt gaaggcgctt
     9661 ttggaagccc tgcaataatt gctatttcag aaagggttaa atctttcaaa gatttattaa
     9721 aataagtttt agccgcagcg gcaacaccgt gagaacgata ccctaggtaa attttgttta
     9781 aatacagctc cagaatctca tttttactga gaacctgttc aatttctaaa gctaaaattg
     9841 cctctttggc cttacgctct aaactacgtt caggtgttaa gaaaaagttt ttcgccagct
     9901 gctgggtgat tgtacttgcg ccttgagtat ctccctggct agtgcgccat attgcacgca
     9961 taataccttt aggatcgatc cctttatgct cgtaaaaacg tgcatcttcg gtagcaagaa
    10021 tcgcttttac taacatcgga ggaatatcat caagcttgac cggaatacgg cgttcttctc
    10081 ctacttcacc aattaattta ccatctaagg taaaaatctg cataggctgc tgtaactcta
    10141 catttttcag cgttgccaca tcaggcaaat cagatttgaa atgcatgtac agtaaaccac
    10201 caattacccc acctaaaacc aagagtgaaa gtaaagcact aaatattatt tttgcgatcc
    10261 gcatcgaaaa aatctctttt ggttaatgac gaaacataaa tttaaagcca atattaggtc
    10321 actaagtata agctaaaaac gcttacttcg cataactaat tgcaaaactt tccttactat
    10381 acttactatg aaattactta aagcacattc aaaaacacct tcaaaccgta tcatcttagg
    10441 cttaagtgaa gatgaacaac gttactgctt agtcaaaaat aaagcagaaa aattcaccgt
    10501 tttttggcaa gccaagcctg cgagcatcga agagcttatc ggtaatctca ccccacaaga
    10561 acaagcaatg atgacgctgg ttcgcccgat cccttaccaa tacatttggc gaaaaaccgt
    10621 ttttatggct aacaccctca atgaagctca attacaccgt aaggtaattc acattttaaa
    10681 aaatgagcag ccacttgcat tggatctact caatattgac tatcagcgat ttccaagcag
    10741 caacgataat ctggataaag tggttatcta cgccgtgcga aaaagttata ccgagaattt
    10801 gagccaattt aacagcatct tagattgtga gctgcattgc tatgcacggg ctataattca
    10861 tttaacacaa tcccaaaata atcagcctgc gccctgtttt tcatttaaac agaagtactt
    10921 ccaatttacc gagacggaat tactgatatt gcaaacagaa cctgaggatt gtattcatct
    10981 atctgatctc aaaattgacc atcttgaaat cgagtgtgag caagagaaac agctatattg
    11041 cctcgcctta ggagcaagtt tatggaatgg caaggtattg atttaagtgc taatcgaaaa
    11101 aataactggt ttgccggcag tgataaaggc atcaaaaacg tgatttatac acttttatta
    11161 tctgccctca ttagcttggc tctgattttt ctctatttgc aaaaaaatca agaaattcaa
    11221 ccgcttgcac agcaattaga gctggtaaaa accgatatat taaatattga aaataaaatt
    11281 atcagcttga atagtaatca tacaaacacc ttgccctttg ccgagcctaa aaaaatagca
    11341 caactactgg caataataga taacttaccg ctcaaaaatg ggggaattga aacgatacaa
    11401 atttatcttg aaaccgatct ctatttaaaa ataatcggta atttagataa tcaatctgat
    11461 tttcaaagtc tagaatctta tttatatcag caagatttat ttgaaaccaa aaccgagcaa
    11521 attaatgtta atcataaaaa tgaaatccaa tttattttca cactgaaaca taaaggtaat
    11581 taatatgttt tctatacatt ctaaaattga agctgcatat tccaatccaa acagttcatt
    11641 atttcagttt atttgcttta tccgaaaata tcctaaagca ttaccatttg gcattatgat
    11701 gatattcatc attccaccta tgatta
//
LOCUS       DANLXD010000085        11671 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.085, whole genome shotgun sequence.
ACCESSION   DANLXD010000085 DANLXD010000000
VERSION     DANLXD010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11671)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11671)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11671
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.085"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            151..897
                     /gene="znuC"
                     /locus_tag="PXD18_001930"
     CDS             151..897
                     /gene="znuC"
                     /locus_tag="PXD18_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein ZnuC"
                     /protein_id="HDL6302328.1"
                     /translation="MVSLENIEVSFNGQKALQNINLSIYPNSITTIVGPNGGGKSTLL
                     KILLKLLSPNKGKVIHQKGLKIGYVPQKLHLEPSMPITVYRFLALKPHTTKEMINQAL
                     DLFSITHLTENSMQKLSGGELQRVLLARAILDRPQLLVLDEPMQGVDIIGQTELYQLL
                     NKTRDLLNCAILMVSHDLNIVMANTDEVLCINKHICCAGSPEVITHDPSFIHFFGDQF
                     ARNVAFYSHKHNHHHNLHGDICLGECSCEH"
     gene            1062..3875
                     /gene="sucA"
                     /locus_tag="PXD18_001931"
     CDS             1062..3875
                     /gene="sucA"
                     /locus_tag="PXD18_001931"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HDL6302329.1"
                     /translation="MQYTHFDDWLASSALGGANQSYIEEIYEQYLENPANVDESWRNI
                     FDSFPKTPQVEQAHTPIRDYFRKLAREQQPQSVTIIDPEAGAKQVRLLQWINAHRFRG
                     YLEAKLDPINYYRWKTSSVPELDYKYHGFTDEDLNETFTVGRYVYDKDTMKLSELDKA
                     LKETYLGPIGLEFMHVQDIEQRNWLQAKMESVLNKPLFTKAEKLNLLSELTAADGLER
                     YLGAKFPGAKRFSLEGSDAFIPMMKEIIRHASRQGMTDVVLGMAHRGRLNMLVNVFGK
                     RPAELFDEFAGKHADESRTGDVKYHQGFSSNFAVDDKNVHLTLAFNPSHLEIVSPVVI
                     GSVRARQERMRDIEHEKVLAVTVHGDSAVAGQGVVQETLNMANVRGYKVGGTIRIVIN
                     NQIGFTTSNPNDTRSTEFCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRTKFKRD
                     IFIDLISYRRHGHNEADEPLATQPMMYSIIKKHPTPRKVYADRLITEGVLTNEQEIEM
                     LNLYRDALDNGECVVPEWREMDMAAVDWLQYLNYDWTALYESKFPEERFLTIAKRVCE
                     YPASLKAHSRVEKIYTDRKEMYEGKKLFDWGMAETMAYATLLDEGTHVRLSGEDAGRG
                     TFFHRHAVIHNQNDGTGYVPLTQLHANQGRFQVWDSVLSEEAVLAFEYGFATTDPKTL
                     TIWEAQFGDFANGAQIVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARVERY
                     LQLCAQQNIQVCVPSTPAQVYHMLRRQAIRKMRRPLVAITPKSLLRHPLAVSSLDELI
                     NGSFQNVIGELDNIDPKQVKRVVMCSGKVYYDLIEKRRENNQTDVAIIRIEQLYPFPL
                     EEMQQILEPYAHVKDFVWCQEEPLNQGAWYCSKHNFEASLPEDAKLTYAGRPASASPA
                     VGYPSLHAKQQKQLVEDALTIAE"
     gene            3978..5207
                     /gene="odhB"
                     /locus_tag="PXD18_001932"
     CDS             3978..5207
                     /gene="odhB"
                     /locus_tag="PXD18_001932"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005654196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HDL6302330.1"
                     /translation="MTIEILTPDLPESVADATVATWHKKVGDNVKRDEILVEIETDKV
                     VLEVPASSDGILAEITQEQGATVVSKQSLGKLVVAKAGDISSATIEQKTESTPSDRKH
                     AAIENSHANADDQGPAIRRLLAEHDLQAADIQGSGVGGRITREDIEKEIAKRVQINQV
                     KGSATSQNTVSTVAFNSRSEKRVPMTRLRKRIAERLLEAKNTTAMLTTFNELDMQPIM
                     NLRKTYGEKFEKQHGVRLGFMSFYIKAVVEALKRYPEINASIDGDDVVYHNYFDISIA
                     VSTPRGLVTPVLRDCDKMSMADIEKKIKELAEKGRDGKLTVEDLTGGNFTITNGGVFG
                     SLMSTPIINPPQSAILGMHAIKDRPVAIDGQVVIRPMMYLALSYDHRLIDGKESVGFL
                     VAVKELLEDPTRLLLEI"
     gene            5500..6660
                     /gene="sucC"
                     /locus_tag="PXD18_001933"
     CDS             5500..6660
                     /gene="sucC"
                     /locus_tag="PXD18_001933"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HDL6302331.1"
                     /translation="MNLHEYQAKQIFKQYGLPVSQGIACKTAEEAVEAIKQLQGEQWA
                     IKCQVHAGGRGKAGGVKLVRNEAEVREFADKWLGKRLVTFQTDANGQPVNTLYLEETC
                     NIDRELYLGAVVDRSAQKVIFMASSAGGMNIEEVAEKTPELIHKAVIDPLTGGQGYQG
                     RELAFKLGLKGDEVKQFADIFVKLANLFVEKDLALLEVNPLVITKEGQLLCLDAKMSI
                     DSNALYRHPELKELQDPSQDDEREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIV
                     KLYGGKPANFLDVGGGATKERVAAAFKLILSDPNVKAVLVNIFGGIVRCDLIADGVIA
                     AVNEVGVNVPVIVRLEGTNAAQGREILANSGLSILAASSLKQAAELAVKSAN"
     gene            6669..7538
                     /gene="sucD"
                     /locus_tag="PXD18_001934"
     CDS             6669..7538
                     /gene="sucD"
                     /locus_tag="PXD18_001934"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HDL6302332.1"
                     /translation="MSILIDKNTKVICQGFTGGQGTFHSEQALAYGTQLVGGVSPNKG
                     GTTHLGLPVFNTVREAVEATGATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPT
                     LDMLQVKQRLNQTGVRMIGPNCPGVITPDECKIGIMPGNIHKKGNIGIVSRSGTLTYE
                     AVKQTTDEGFGQSTCVGIGGDPIPGSNFIDILKLFQDDPETEAIVMIGEIGGSAEEEA
                     AAFIKENVTKPVVSYIAGVTAPKGKRMGHAGAIISGGKGTADEKFKILEDAGVTTVRS
                     LAEIGSALRKILG"
     gene            complement(7609..9054)
                     /locus_tag="PXD18_001935"
     CDS             complement(7609..9054)
                     /locus_tag="PXD18_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HDL6302333.1"
                     /translation="MDSIILFFESVLTWIVNTIDGPLWDVTIILLLGAGLFFTLTTGF
                     VQLRLLPQSLREMWGGRSTEGKSLTPFQAFTTGLASRVGVGNIGGVATAIALGGPGAV
                     FWMWITALMGMSSAFAESSLAQLYKTKDPNGMFRGGPAYYITRGLKLPSLAIAFAVTL
                     IFTFGFAFNAVQSNSIVEATKNAWDWNPVYVGMTLVVITGLIISGGVKRIGKVSAQVV
                     PMMALFYLIIAVIILGMNIEKVPSIISLIIESAFDFSAAAGGTFGALVSKTMLMGIKR
                     GLFSNEAGMGSAPNSAATSDAKHPASQGLIQMLGVFVDTIVVCTCTAVIILMSNNYGG
                     ETLRGISLTQSALQFHLGEFGLHFLAFVILLFCFTSIIGNYAYAETNIRYIKNSPWFV
                     WGFRAIVLFFVYFGAVRDGGIVWAFADTVMASMAVINLVAILILAPIVWIILKDYLRQ
                     VKSGKEPVFRIEEHQDLIHKGVDPLIWKSKE"
     gene            complement(9159..10145)
                     /locus_tag="PXD18_001936"
     CDS             complement(9159..10145)
                     /locus_tag="PXD18_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel/cobalt transporter"
                     /protein_id="HDL6302334.1"
                     /translation="MRLKATYWGMIVIGFLSLFALYQLYPMILFKVMEWQKNFNLQLS
                     ASLNELAENQSKAGITLVFISFLYGVFHAVGPGHGKFILSSYLSFEKTKLNQAMKITF
                     ASALVQGLVAISLVTVIVVIFTLSRQYFNLTLKWVERGSFGLMILFGIYWCYQVYRTV
                     NRARKPIIKSIRISQKKAGKLPLVTQKGHIHTENCSCRHKHLPTSNEMQQVRDWKAQL
                     MLVLSIGSRPCSGAILVLFLSYTLNLYAWGVISALAMAVGTGLTLSLFAYLVIIARNK
                     AVKVSQWYFSAQINRNIVWILKFTLGLALILFGMVLFHSSFIDAGTGVFFKR"
     gene            complement(10136..10774)
                     /locus_tag="PXD18_001937"
     CDS             complement(10136..10774)
                     /locus_tag="PXD18_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1007 family protein"
                     /protein_id="HDL6302335.1"
                     /translation="MKFIKTIITLIALYSMPVFSHPHSFVDLKTNVIVEGSMLKSFQM
                     EWMLDEIASSELIYEVKNSQDKEKTQQNITAEMVQTALQNHYFSTLYDSQNQPIKFTT
                     KPTATRFEIKNNRVIFYITFHLAKPHELKQSKVRFYTYEPSYYIAMEYNRPADVNTSN
                     ASCKATLVQPQVDSKLRLYASGLDKNQSLDMPENGDYSLGAQFAQKVEIICD"
     gene            complement(10835..11213)
                     /gene="rnpB"
                     /locus_tag="PXD18_001938"
     ncRNA           complement(10835..11213)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="PXD18_001938"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
BASE COUNT         3663 a         2516 c         2300 g         3192 t
ORIGIN      
        1 ttcatttaat ctattgtcac aacacgaaaa atcagctaat tttaactcaa tacccctaat
       61 ttttttatat caatgaaaat ccatcatctt aaaccgaatc taaataccac tacatttgaa
      121 ctattcaaac agaatttatc cgcgacatca ctggtttctc ttgagaatat tgaagtgtct
      181 ttcaatggac aaaaagcatt acaaaatatt aatttatcta tttatcctaa ctctatcacg
      241 acgatagtcg ggccaaatgg tggaggaaaa tctaccctgc ttaaaatttt gctaaaatta
      301 cttagcccaa ataaaggaaa ggttattcat caaaaaggac tcaaaattgg ctatgtacca
      361 caaaaattgc atttagaacc ctcgatgccc attactgttt atcgatttct tgcgctaaaa
      421 ccacatacta ccaaagaaat gattaaccaa gcactagatc tgttttctat tacccatctc
      481 actgaaaata gtatgcaaaa attatcgggt ggtgaacttc aacgtgtatt gctggctcgg
      541 gcaattttag atcgtccgca actcttagtg ttagatgaac caatgcaagg cgttgatatt
      601 ataggccaaa ccgaactcta tcaattactt aataaaacaa gggatctcct taactgtgct
      661 attttaatgg tctcacacga cttaaatatt gtgatggcga atacagatga agtgctttgc
      721 atcaataaac atatttgttg tgccggaagc cccgaagtca ttacacacga tccgagcttt
      781 atccattttt ttggcgacca atttgcacgt aatgttgcat tttattcaca taaacataac
      841 catcaccata atttacatgg cgatatctgc cttggtgaat gtagttgtga gcactgatag
      901 gcgtcctttt taccaaatgt ttaaaatttg taaaaataat gctaaaaata accgcttgca
      961 gcacaagatt tatctaaaaa tcagacttac ttcacatttt atttgcttaa attggagtat
     1021 aataagggcg tgatttcata ccacaaacag gtcaggtctt tatgcaatat acacattttg
     1081 atgattggct tgcatcatct gcattaggcg gtgcaaacca atcttatata gaagaaattt
     1141 atgaacagta tctagaaaat ccagcaaatg ttgatgaaag ctggagaaac atctttgatt
     1201 catttcctaa aactccccaa gttgaacaag ctcacacccc tattcgtgac tatttccgta
     1261 aattagcccg tgaacagcaa cctcaatccg tcactattat tgacccagaa gcaggggcga
     1321 aacaagttcg cttactgcaa tggattaacg ctcaccgttt ccgtggctat ttagaggcaa
     1381 aactagaccc aattaactat taccgttgga aaacctccag cgtgcctgaa ttggactaca
     1441 aatatcacgg cttcaccgat gaagatctca acgaaacttt tacggtcggt cgctatgtct
     1501 atgataaaga cacaatgaag ctcagcgaac tggataaagc cctaaaagaa acttatttag
     1561 ggcctattgg tttagaattt atgcacgttc aagatattga acaacgcaac tggcttcaag
     1621 ccaaaatgga aagcgtgcta aacaaaccgc tgttcaccaa agcagaaaaa ctgaatttat
     1681 taagcgaatt gaccgctgcc gatggtttag agcgttactt aggggcaaaa ttcccggggg
     1741 caaaacggtt ctcattggaa ggtagtgatg cctttattcc gatgatgaaa gaaattatcc
     1801 gccacgcttc ccgtcaaggt atgaccgatg tggttttagg tatggcacac cgtggtcgtt
     1861 tgaatatgtt agtgaacgta tttggtaaac gcccggcaga attgtttgat gaatttgccg
     1921 gcaaacacgc tgatgaaagc cgcacgggcg atgtgaaata ccaccaaggt ttctcctcaa
     1981 actttgccgt agatgataaa aacgttcacc ttacccttgc tttcaaccca tcgcatttag
     2041 agattgttag cccggtggta atcggctcag tgcgtgcaag acaagaacgt atgcgtgata
     2101 tcgaacacga aaaggtgctt gcggtgaccg ttcacggtga ctctgcagtg gcagggcaag
     2161 gtgtagtgca agaaacctta aatatggcaa atgttcgtgg ctataaagta ggaggcacta
     2221 tccgtattgt gatcaacaac caaatcggat ttaccacctc taacccaaat gacacccgct
     2281 ccaccgaatt ttgtaccgac attgccaaaa tgattcaggc accgattatt cacgttaatg
     2341 gtgatgatcc ggaagctgtt gcctttgcag cgagaatggc tgtggaatat cgtactaaat
     2401 ttaaacgtga tatttttatt gatttaatct cttaccgtcg tcacggtcat aatgaagccg
     2461 atgagccttt agcaactcag ccaatgatgt atagcatcat caaaaaacac ccgacacctc
     2521 gcaaagtcta tgcggatcgt ttaattaccg aaggtgtttt aaccaacgag caagaaatcg
     2581 agatgttaaa cctgtatcgt gatgccttag acaacggcga atgcgttgtg ccggaatggc
     2641 gtgaaatgga tatggcagcg gtcgattggc tacaatatct caattacgac tggactgccc
     2701 tatacgaaag taaattccct gaagaacgat tcttaaccat tgccaaacgg gtgtgcgaat
     2761 atccggcttc gcttaaagct cattctcggg ttgaaaagat ctacactgat cgcaaagaga
     2821 tgtatgaagg caagaaatta ttcgactggg gtatggctga aacaatggca tacgctactt
     2881 tgttagacga aggcacacat gttcgccttt caggagaaga tgccggacgt ggcactttct
     2941 tccatcgcca tgcggtaatc cataaccaaa atgatggaac aggctatgtg ccacttactc
     3001 aactgcacgc caatcaaggg cgtttccaag tatgggattc cgtactctct gaagaagcgg
     3061 tactcgcctt tgaatatggc tttgccacta ccgacccgaa aacactgacc atttgggaag
     3121 ctcaatttgg agatttcgct aacggagctc aaattgttat cgaccaattt atcagctcag
     3181 gcgaacaaaa atggggcaga atgtgcggtt tagtgatgtt attaccacac ggctatgaag
     3241 gtcaagggcc ggaacactcc tctgcccgag tggaacgcta tttacagctt tgtgctcagc
     3301 aaaatattca agtttgcgtg ccatcaacac cggcacaggt ttaccatatg ttacgccgtc
     3361 aagcgatccg caaaatgcgt cgcccattgg ttgcaatcac accaaaatca ttgctacgcc
     3421 acccacttgc ggtgtcatct cttgatgaat tgattaacgg ttcattccaa aatgtgattg
     3481 gcgagctcga taatatcgat cctaaacaag tcaaacgtgt ggtgatgtgt tcgggtaaag
     3541 tgtactacga cttaattgaa aaacgccgtg aaaataacca aacggacgtt gccattattc
     3601 gtatcgaaca gctctacccg ttcccacttg aagaaatgca acaaattctc gagccttacg
     3661 ctcacgttaa agactttgtc tggtgtcaag aagagccact aaaccaaggt gcgtggtatt
     3721 gcagcaagca caattttgag gcttctctgc cggaagatgc aaaattaact tacgcaggca
     3781 gaccggcttc tgcttcaccg gcggtgggtt atccatcgtt acacgcaaaa caacaaaaac
     3841 aacttgttga agatgcttta acgatcgctg aataataaaa tgggcgtata tacgccctac
     3901 aagcggttca cttttaacca aattttacaa tttacgctgt cggagtttta aaactctctc
     3961 gaaaaaagga ataagttatg accattgaaa ttttaacccc cgatttaccc gaatctgttg
     4021 ccgatgcgac cgttgccact tggcataaaa aagtgggcga caatgtaaaa cgtgatgaaa
     4081 ttttagtcga aattgaaaca gacaaagtcg ttttagaagt accggcttca agcgatggta
     4141 ttcttgcaga aattacccaa gaacaaggtg ctactgttgt atccaagcaa tctctgggta
     4201 aattagtagt agctaaagcc ggtgatatta gctctgcaac tattgagcaa aaaacagaat
     4261 ccacgccatc agaccgcaaa cacgcagcaa ttgaaaacag ccacgcgaac gctgatgatc
     4321 aagggcctgc gattcgccgt ttattagccg aacacgactt acaagccgct gatattcaag
     4381 gcagtggtgt aggcggcaga atcacccgcg aagatattga aaaagagatt gccaaacgag
     4441 tgcaaatcaa ccaagtaaaa gggtctgcaa ccagccaaaa caccgttagc actgtagcat
     4501 ttaacagccg tagcgaaaaa cgtgtgccga tgacacgact ccgcaaacgt attgccgaac
     4561 gcttactaga ggcaaaaaac accactgcaa tgctcactac ttttaacgag ctggatatgc
     4621 aaccaattat gaatttacgc aaaacctatg gcgaaaaatt cgaaaaacaa cacggtgtgc
     4681 gtttaggctt tatgtcgttc tacattaaag ccgtggttga agcattaaaa cgctaccctg
     4741 aaatcaatgc ctccattgat ggcgatgatg tggtttatca taactatttc gacatcagca
     4801 ttgcggtttc taccccacga ggcttagtca cacctgtgtt gcgtgattgc gacaaaatga
     4861 gtatggcaga tattgagaag aaaattaaag aacttgccga aaaagggcgt gacggcaaat
     4921 taaccgttga agacttaacc ggcggtaact ttaccatcac caacggcggg gtattcggtt
     4981 cattaatgtc caccccaatt atcaacccgc cacaaagtgc gattttgggt atgcacgcta
     5041 ttaaagaccg ccctgtcgcc attgacggac aagtagtgat ccgcccgatg atgtacctag
     5101 ccttaagcta tgaccaccgt ttaattgacg gtaaagaatc tgtcggtttc ttagtggcag
     5161 ttaaagagtt attagaagac ccaacccgtc ttcttttgga aatttaatcg aaaatatgac
     5221 cgcttgtact tttagctaca agcggtctgt ttttaataaa atttgacaaa atccgataaa
     5281 cgctctattt gagttccctt ctgagccacc tgagcgactt tgaatttgta ggaaaaattt
     5341 agtgtttgag cttacaaggc aagcgagtta taaatttttc cgtcaagcaa attcaaacta
     5401 agcgaagaaa gtggcgaagc agggtgtgct ttcttttggt tacttttctt tgcacaagca
     5461 aagaaaagta acataaaaaa aaccaaacga ggaaactcta tgaatctaca cgaatatcaa
     5521 gcaaaacaaa tattcaaaca atacgggctt cccgtaagcc aagggattgc ttgcaaaacg
     5581 gcagaggaag ccgttgaggc aattaaacaa ctacaaggtg aacaatgggc gataaagtgc
     5641 caagttcacg ctggtgggcg tggcaaagcc ggcggggtga aactggttcg caatgaagcc
     5701 gaagtgcgtg aatttgccga taaatggctc ggcaaacgct tagttacctt ccaaaccgat
     5761 gctaatgggc aaccggttaa taccttatat ttagaagaaa cctgcaatat cgaccgtgaa
     5821 ttgtacttag gtgcagtggt tgatcgctcc gctcaaaaag tgatttttat ggcatcaagt
     5881 gccggtggta tgaatattga agaagtagcg gagaaaaccc ctgaattaat tcacaaagcg
     5941 gtaattgacc cactcaccgg tgggcagggt tatcaagggc gtgaattagc atttaaatta
     6001 ggcttgaaag gtgatgaagt taaacaattt gcggatattt tcgtgaaact ggctaaccta
     6061 tttgttgaaa aagatttagc tttattagag gtaaatccac ttgtcatcac taaagaaggg
     6121 caactactct gcttagatgc aaaaatgtcg attgacagca atgctctcta ccgccaccca
     6181 gaacttaaag agttgcaaga cccatcgcaa gatgacgaac gtgaagctga agcggaaaaa
     6241 tggaatctca actacgttgc actagatggc aatatcggct gtatggtaaa cggtgcgggg
     6301 ctggcaatgg ggacgatgga tatcgtcaaa ctttatggtg gtaaaccggc taacttctta
     6361 gacgttggcg gtggtgcaac caaagagcgt gtagcagcag cttttaaatt gattttatct
     6421 gatccgaatg tgaaagccgt gttagtcaat atttttggtg gtatcgtccg ctgcgatttg
     6481 attgctgatg gcgtcattgc tgctgtaaac gaagtcggcg tgaatgtgcc tgttattgtg
     6541 cgtttagaag gcactaatgc cgcacagggg cgtgagattt tagccaatag cgggctgagt
     6601 attctagcgg catcatcatt aaaacaagcg gctgaattag cggtaaaatc tgcaaattag
     6661 gaggaaaaat gtcgatttta attgataaaa acacaaaagt aatttgccaa ggtttcaccg
     6721 gcggacaagg tactttccac agcgaacaag cccttgctta tggcacacaa ttagtcggcg
     6781 gagtttcgcc gaataaaggt ggcacaaccc atttaggctt accggttttc aacaccgtac
     6841 gcgaagcggt agaagcaacc ggtgcaactg caaccgttat ctacgttccg gctcccggct
     6901 gtaaagatgc tattttagaa gccattgatg ccggcatcca actaattgtc tgtattactg
     6961 aaggcattcc aaccttggat atgctacaag ttaaacaacg tctaaaccaa accggcgtgc
     7021 gaatgatcgg tccgaactgc ccgggtgtga ttacccctga tgagtgcaaa atcggcatta
     7081 tgccgggcaa tatccacaaa aaaggcaata tcggtattgt ttctcgttcg ggtactttaa
     7141 cctatgaagc agttaaacaa acaactgacg aaggctttgg tcaatctact tgtgtcggta
     7201 tcggtggtga tccgattccg ggatctaact ttattgacat tttaaaactg ttccaagacg
     7261 atcctgaaac tgaagcaatt gtgatgattg gtgaaatcgg cggctctgcc gaagaagaag
     7321 cggcagcttt catcaaagaa aatgtcacca agcctgtagt cagctatatt gccggtgtca
     7381 ccgcaccaaa aggcaaacga atgggacacg ccggtgcgat tatcagcggc ggcaaaggaa
     7441 ccgccgatga aaaattcaaa atccttgaag atgccggtgt gacaaccgtc agaagtttag
     7501 ccgaaatcgg ttcagctctt agaaaaattt taggctaaac taaaagttca agcagtcata
     7561 tttacccatt tttttgtaaa tatgaccgct tgtttttttg ctattaaatt actctttcga
     7621 tttccaaatt aatgggtcaa cacctttatg gataaggtct tgatgttctt caattctaaa
     7681 cactggctct ttgccacttt tcacttggcg aagatagtct tttaaaataa tccagacaat
     7741 cggagcaaga attaagatag ccaccaagtt aattaccgcc attgatgcca tcactgtatc
     7801 ggcaaatgcc catacaatcc ctccgtctct tactgcaccg aagtacacaa agaataaaac
     7861 gatggcacgg aatccccaca caaaccacgg actgttttta atgtagcgga tattagtttc
     7921 tgcataagca tagttaccga taatggatgt gaagcaaaac agtaaaatca caaatgctaa
     7981 aaagtgtaaa ccaaattcac ctaaatggaa ttgtaacgca ctttgagtaa gtgaaatacc
     8041 tcttaaagtt tcaccaccat agttatttga cataagaatg atcactgcag tacaagtaca
     8101 gactacaatt gtatctacaa atacgcccaa catttgaatt aagccttgac ttgccgggtg
     8161 tttcgcatca gaagtcgctg cagaatttgg tgcagatccc ataccagctt cgtttgagaa
     8221 taagccacgt ttaatcccca ttagcatagt tttggatacc aatgctccaa acgttccacc
     8281 tgcagcagca gaaaaatcaa aggcgctttc aataattaaa gagattatac ttggcacttt
     8341 ttcaatattc atacctaaaa taattactgc aataatcaag tagaataatg ccatcattgg
     8401 aacaacttgg gcagaaactt taccaatacg cttgacccct ccagaaataa ttaaccctgt
     8461 aatcaccact aatgtcatgc ctacgtagac tgggttccaa tcccacgcat ttttggttgc
     8521 ttccacaata gagttagatt gcacagcatt aaaagcaaaa ccaaaggtga agataagcgt
     8581 cactgcaaaa gcaatagcaa gagaaggcag ttttaaacca cgagtgatgt aataggctgg
     8641 cccaccacga aacattccgt ttggatcttt ggttttatac aactgagcca gtgaagactc
     8701 agcaaaggcg gaactcattc ccattaaggc ggtaatccac atccagaata ccgcacccgg
     8761 cccacccaaa gcgattgcag tagctacccc accaatatta ccaaccccaa cacggctggc
     8821 taatccagta gtaaaggctt ggaacggagt taatgatttc ccttccgtag aacgtcctcc
     8881 ccacatttca cgtaaacttt gcggaagaag acgcagctgg acaaaacctg ttgtaagagt
     8941 gaaaaataac cctgcaccga gcaataggat aatcgttaca tcccaaagtg gaccgtcgat
     9001 tgtgttcaca atccaagtca gtacactctc aaaaaataga ataattgaat ccataaagac
     9061 ctcttaattg aaaataaaac ttccacattg taaccgattt aatattttta aaaagttttt
     9121 ttaatacttt taataaaaat ttttaataac ttattaattt agcgtttgaa aaaaacgcct
     9181 gtaccagcat caatgaaact actgtgaaat aataccattc caaatagaat taatgcgagt
     9241 ccaagtgtaa attttaatat ccaaacgata tttcgattaa tttgagctga aaaataccat
     9301 tggctaacct taactgcctt atttctcgca atgataacaa gataagcaaa taagcttaaa
     9361 gtcagccctg ttcctactgc catagctaat gctgaaataa ccccccaagc atagagattg
     9421 agcgtataag aaagaaataa aacaagaata gcgccagagc aaggtcttga gccaatactt
     9481 aataccaaca tcagctgtgc tttccaatct ctcacttgtt gcatttcatt tgaagtcggt
     9541 aaatgtttat gcctacagct acaattttcg gtatgaatat gccctttctg cgtgacaagc
     9601 ggtaattttc cagctttttt ttgcgaaata cgaatggatt taatgatagg ctttcgcgct
     9661 ctgttcaccg ttcgatacac ctggtaacac cagtaaatgc cgaacaagat catcaaacca
     9721 aagctccccc gctcaaccca ttttagggtt aaattaaaat attggcgaga gagagtaaaa
     9781 atcaccacaa tcaccgtcac caatgaaatt gccactaagc cctgcaccaa tgctgaggca
     9841 aaagtgattt tcatcgcctg atttaatttt gttttttcaa aagaaagata actgctcaga
     9901 ataaattttc cgtgaccagg cccaactgcg tgaaatactc catataaaaa actaataaat
     9961 actaaggtaa taccggcttt actttgattt tcagctaatt cattgagcga agcggaaagc
    10021 tgtaaattaa agtttttttg ccattccatc actttaaaca atatcattgg ataaagctga
    10081 taaagagcaa ataggctcaa aaatcctatc actatcattc cccaatatgt tgcttttaat
    10141 cgcatataat ctccactttt tgagcaaatt gggcaccaag agagtaatct ccattttcag
    10201 gcatatccag tgattggttt ttatccaaac cggaagcata taagcgtaac ttactatcta
    10261 cttgaggttg caccaatgtt gctttacaac ttgcattact ggtattgaca tcagcagggc
    10321 gattatattc catcgcaata taataactcg gttcataagt atagaatctc actttactct
    10381 gctttaattc gtgaggttta gctaaatgaa aagtaatata aaaaatcact ctgttattct
    10441 tgatttcaaa gcgagtcgct gtgggctttg tcgtaaattt tatcggctga ttttgactat
    10501 catataaggt gctaaaataa tgattttgca atgcggtttg caccatttct gcagtgatat
    10561 tctgctgagt tttttcttta tcttggctat ttttcacttc ataaattaac tcagaagaag
    10621 caatttcatc tagcatccat tccatttgga aagatttcaa cattgagcct tccacaataa
    10681 cattcgtttt caaatcaaca aatgaatgtg ggtgagaaaa aactggcatt gaatataatg
    10741 caattaacgt gataatcgtc ttaataaatt tcatatttac tttcactata aaataaaaaa
    10801 gcgaacaagt tccccctgtt cgcatttcaa gaatttagtg agttggtcga taagccgagt
    10861 tctgtcgtgg acaatcattc ctctagacgt acatttacac atacgctcaa gcaacctacc
    10921 cgaactctca gcgggccacc gattgagttc ctatttggtc ttgctacgag tggagtttac
    10981 cctgctgtgg aatgttacca cccacacggt gcgctcttac cgcacccttt cacccttacc
    11041 gacaaagccg gcggtctgct ctctgttgca ctggtcgtag gctcacgccc cccggacgtt
    11101 atccggcact ctgccctgtg tagctcggac tttcctctcg tttacttgtc ccccagttta
    11161 cgttttcacg aatttagagg cttcaataaa ccagcgattg cctaaccaac tcagcactag
    11221 agtataatgc tttcgcaaaa aattgcaagg aaataaccgc ttgtagttat tatggcaaaa
    11281 taaaaaagga ttaagttcat ttaaaaactt aatcctcttc gctttaattc actcgtaaaa
    11341 attacgcacg tttgaagtct aagtgaacta attttggttt ctctatttta ttacaataat
    11401 ttcaaagggt tatttaatca atttcctttc tatttccgaa actatataca tttttccgaa
    11461 actcaaattt taatcagatt ataaaacaag ctattttcct tttttctcat tccaaaaata
    11521 ccatccaaaa catcttaccg ccaaccaagt gctccacgca aaaataggtc tattttgcgc
    11581 aatcaaacaa tcccttaacc gcttatctgc ttccgctcta ctgacttttc cgtttacgcc
    11641 cacgatcgtg ttgatgacag cacgaattaa t
//
LOCUS       DANLXD010000086        11338 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.086, whole genome shotgun sequence.
ACCESSION   DANLXD010000086 DANLXD010000000
VERSION     DANLXD010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11338
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.086"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            302..1030
                     /gene="ttrB"
                     /locus_tag="PXD18_001939"
     CDS             302..1030
                     /gene="ttrB"
                     /locus_tag="PXD18_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrB"
                     /protein_id="HDL6302336.1"
                     /translation="MDLSKRSFLKELSALTVGASFVPLQSAQAFMPAWREGDENKRYA
                     MLIDLRKCIGCQACTVSCSVENATPLHSFRTTVRQYEITNGTQVVNNVVLPRLCNHCD
                     QPPCVPVCPVQATFQRKDGVVVINNEQCIGCGYCVQACPYDARFINEETKTADKCTFC
                     THRLEVGLLPACVESCVGGARVIGDLNDPKSQISQLYQAHKDDLKVLKPEAGTVPHVF
                     YVGLDDDAFVSKIDGQPMLWTGEA"
     gene            1032..2063
                     /gene="nrfD"
                     /locus_tag="PXD18_001940"
     CDS             1032..2063
                     /gene="nrfD"
                     /locus_tag="PXD18_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysulfide reductase NrfD"
                     /protein_id="HDL6302337.1"
                     /translation="MIREVLVEPQHIVWLPWIVHYFFFVGVAATAVFTAVLFAKKSLK
                     PTACELAAVTVALIGSIVAPVALTADLHQPSRILHFYTDFAWRSPMAWGAIILPLFSV
                     AVAGYFVLALAHHTRPNLPKWLAWLQLPILQNQGLLWAFRLFATLTAIGIIGYTVLET
                     YQTGTRTLWHSAWLLPIMLFSAWAVALGLTQAVCKMLFHTQTNTGLWTKLCLILTALS
                     LVGLAFSSPQATQDFAQLFNGSITAYLVGIFWLIALICNFSAKNHRLQWLGVLALIAF
                     GWLLRWVLVIQVQTIAKTNALQNPYHFDWTAVDGGLGIVSIFGLTVLVSIVVWQLILI
                     ICGGRKGEQ"
     gene            2053..5148
                     /gene="ttrA"
                     /locus_tag="PXD18_001941"
     CDS             2053..5148
                     /gene="ttrA"
                     /locus_tag="PXD18_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrA"
                     /protein_id="HDL6302338.1"
                     /translation="MNNKRRNLLKGGLALGGAAAFGAGYSPKVSEIAKGVMHGTSGEK
                     TRDAIHGNSLTPEYQVKDGKLLSNPEQIVCNTQCMGCWTQCGIRARVDLNTNQVIRIS
                     GNPYHPLSSDKTLPFGMPIAKAELLLAGESGIENRSTACARGAAFLEGVNSPYRITQP
                     LKRVGKRGEGKWQTISFEQLVEEIINGGNLFGEGEVEGLKTIRNLVDPINPKQPDLGM
                     KANQLLVTFAGPEGRQPILQRFAQKSFGTINFSNHGAYCGAAYRAGSGAFMKDFDNQQ
                     HAKPDWDHAEFILFIGTSPAQSGNPFKRQARQLAKRRPDDNFSYVVVSPRLEMTSSLA
                     TQNNHWVPIKPEGDLALVMGMLRWIIENERFNADYLSRPSLAAMENAGHVSYANASHL
                     IICEPNHPKFGQALRISDLQDVQLDPEEKVEENLIVVKDQASGELISAKDCLQAVIFV
                     EQIAKLLDGSEVLVKSSMQLLKEATQEKTLAEYSDICGVPVQTIENLAKKFTSHGHKA
                     NAITHGGTMHSTGFYTSWAILLLNAMVGNLNKKGGMAVAAGKFKDFGDGPRYNLANFP
                     NEVKPKGTNLARSKKAYQNSSEFKQKVTKGENPYPAQGAWYPFTGGQTTEMFTSMVQG
                     YPYFAKAWINHMANPVYGLTAMNPIALEKLKDPKILPLFVSIDAFMNETTALTDYIVP
                     DTHNFESWGFSTAWGGVPQRTSTARHPIVPSKNAKTAEGDTICMENFVIAVAKKMGLP
                     GFGENAIADLEGNRYPLHRTEDYFLRAAANIAFAGEKPAPDASEQDLLLTGVQRIMPK
                     IEQTLKAEERLKVANVYCKGGRFAPHESAWKEENMEFQWKNCLQIWNENVYKAQHHSN
                     GEHYWGCPRYMSPRFADGSTLEQHYPQSEWGFKLISFKSNIMSSITAPLLRLLSIKPE
                     GLVAMNRLDAEEKGIKHGDVVKLSTPTAGLTVQIVVLDGIARGTIGIEHGYGHKQIGA
                     SSYTIDGVEIPANPMIAKGINLNDLGIIDHTKAVKSPWVDWVCGSAVRNGIPAKVEKL
                     A"
     gene            5289..6134
                     /locus_tag="PXD18_001942"
     CDS             5289..6134
                     /locus_tag="PXD18_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL6302339.1"
                     /translation="MTFVKKTALSLIATALFATSSFAAEQSQYQHIRNATAKIEYAGK
                     TFLVDPYLAEKDRYLPPNAKKRNPTLDMTVSIDEVLNGVDAVIVTHTHHAHWDDVAQQ
                     RVPKNLPIFVQNAGDARLIRSQGFTDVRVVGKDTPFEGVTLTRTRGQHGTDAMYANPK
                     IAEMVGDAMDVVMKAEGKPTVYLVGDTIWNHEIEHSFNTYKPDFVVLNAGCAKLPNFE
                     GSPIMCTEDVSKAHKIAPQAKILTVHMDALPQTSISSDQMRDYVQKEGLNRVTVPKNG
                     DVIKF"
     gene            complement(6247..7644)
                     /locus_tag="PXD18_001943"
     CDS             complement(6247..7644)
                     /locus_tag="PXD18_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDL6302340.1"
                     /translation="MKLSKLAFSVALALTVTACTTGNMSNDGTLQQAQQTYQSYDEIT
                     KQYQINEQWWQGYTDAELNRVVDLAIKNNLDLAKSGIAVNKALYNANLVGANLVPTFS
                     GSGSVSAAKGLGSASSNNVSTGVSTTAAQAAFNLSYTVDLWRRLADTASAAEWTHKAT
                     IEDLKATRLSIINAVVTTYYQLAYYRDAIRITEESIRHYEQISRILTNKMNAGAIDSL
                     AVDQAQQAVLNARNSVIDLKTNQKIAEQTLRNLLNVQPNTPLNIRYPNIMSVKLQGVD
                     LNVPVSAIANRPDVVGSLQRLQSAFKTLTATEKSWFPTLTIGGSITGSATNIGNVADN
                     PVGNGLIKLDLPFLDWNRVKNNVKISETDYVTARLNYEQKITSALNEIDRYYYSYTQS
                     RSSLKILQDTNAKNKRISSYYKNRYEQGVSEFREWITALNTELNSQLAILNAKYAILT
                     NENAVYQAMAGKYRR"
     gene            complement(7734..8357)
                     /gene="gmk"
                     /locus_tag="PXD18_001944"
     CDS             complement(7734..8357)
                     /gene="gmk"
                     /locus_tag="PXD18_001944"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDL6302341.1"
                     /translation="MSLGNLYIISAPSGAGKSSLINALLADLPRSEVQLSISHTTRQP
                     RPAEQDGVHYYFTSHDEFKQLIEQGYFLEWAEVFGNYYGTSLPMIERSLEQGIDVFLD
                     IDWQGARQIREKVPNVKTVFILPPSKTELEKRLIGRGQDSAETIAKRMAEAVSEMNHY
                     NEFDYVIINDDFQQALAELKAILIAERLSLGSQQIRHQHLITDLLNN"
     gene            complement(8470..8943)
                     /gene="gpt"
                     /locus_tag="PXD18_001945"
     CDS             complement(8470..8943)
                     /gene="gpt"
                     /locus_tag="PXD18_001945"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HDL6302342.1"
                     /translation="MSEKYTNEKYVVTWDMFHMHARKLAENLLPATQWKGIIAVSRGG
                     LFPAAVLARELGIRHVETVCIASYDHDSQGELNVLHAADTDGEGFIVVDDLVDTGNTA
                     KEIRRMYPKARFVTVFAKPHGAPLVDDYVIDIPQETWIEQPWDLGITFVQPLARR"
     gene            complement(9089..10498)
                     /locus_tag="PXD18_001946"
     CDS             complement(9089..10498)
                     /locus_tag="PXD18_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL6302343.1"
                     /translation="MKKYPLLFSLFSPVVWAEKVIEHNTDPISFERQPQAVKFEQNVV
                     KNSQKPTAYQPAYSVNQNVEQQINQAILSQDWATLEPLLSRYPQTENFDPLLWHYAQA
                     ALAYAKKDHQTAVFHYRQLLAKPPSLVYPRFDLALILAEDQQFRAAEQEFKAIQAHLP
                     PELAKIARNTQVQIAENEAWQPDFYLQYTQTDNVNNASSSPIVNVNGRIFRKNADSLP
                     QSAKGVRYGLGLSKLHNVKGNHFVGLTLNYSGIYYWDNRDYREQSVSVSPNYSYRTVA
                     YRLTFSPFIEQNWLGSSRYNVQFGATLNGLRYLNSQWLVSGSFTHLQKRYFEELTASR
                     YNSYQHQLSGGVQWQAVKNGRFFANLDGVREIAREKAQSSNKWLARVGAVFQGERWAT
                     QASIGFGKRYFADKHYLFGYKRLDTEYQANLAVWNRTWHWQGIVPKLNFRYQKIDSNI
                     ADFYSRQNKEVFFTLEKLF"
     gene            complement(10694..>11338)
                     /locus_tag="PXD18_001947"
     CDS             complement(10694..>11338)
                     /locus_tag="PXD18_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin transporter"
                     /protein_id="HDL6302344.1"
                     /translation="AAKEKAEAERLAAEKEVDPIAIIKAKGIDDTNYGLKLGNSKETI
                     EGKVTVRTQSYLYNQPYSVVTAQAVQRNGWENGNYIDKVDGTVTVKGLKTEKLPTEGT
                     ATYSGKAFNHDGAKGFNGGDLTYNVNFSKRTGSGRVEGEFGNLIVLEEGTINNTQISS
                     TVHGNNPLNLSGKYTVEFFGKNAEEIAGEIQTKANLTGEVSNFGLAGTRGDIQK"
BASE COUNT         3063 a         2646 c         2597 g         3032 t
ORIGIN      
        1 aagcaggatg gaaaattaga aaaggaaaga aacataatat attaattgcc ccaaattcta
       61 ggagattagc gatacctagt accccgagtg atattaatgc gtataaaaac tttagatcta
      121 aactaaacca tcttattgct ttttaattag tatcaatgcc ctattatcta cttgtatagg
      181 gcatttccct tcatccttga cccaaatcaa ctttcccctt gatatgtgga aaaccacaat
      241 accttgccgt tccctctccg ccttagaata cctttgttat ttttaaattt gtgggggaaa
      301 tatggattta agcaaacgtt cctttttgaa agagctttcc gccttgacgg tgggggcgag
      361 ttttgtgccg ttgcaatcgg cccaggcgtt tatgccggct tggcgtgagg gcgatgagaa
      421 caaacgctat gcgatgctga ttgatttgcg taaatgtatc ggctgtcaag cgtgtaccgt
      481 gagctgttcg gtggagaacg ccacgccgtt gcacagtttc cgcaccacgg tgcgtcaata
      541 tgaaatcacc aacggcacgc aggtggtgaa caatgtggtg ttgcctcgtt tgtgtaacca
      601 ttgcgatcaa ccgccgtgtg tgccggtctg cccggtgcag gcaacctttc aacgtaaaga
      661 cggtgtggtg gtgattaaca atgagcagtg catcggctgt ggttactgcg tgcaagcctg
      721 cccgtatgat gcccgtttta tcaatgaaga gaccaaaacc gccgataaat gcaccttctg
      781 cactcaccgt ttggaggtag gtctgctgcc ggcgtgcgtg gaaagttgcg tgggcggggc
      841 aagggtgatt ggcgatttga acgacccgaa aagtcaaatt tcccaacttt atcaagccca
      901 caaagatgat ttgaaagtcc tgaaaccgga ggccggcacc gtgccacacg ttttctatgt
      961 ggggctagac gatgatgcct ttgtgagcaa aattgacggg caaccaatgc tctggacggg
     1021 ggaggcgtaa aatgattcgt gaagtattag tggaaccgca acatatcgtc tggttgccgt
     1081 ggattgtgca ttatttcttc ttcgtaggcg tggcggcaac ggcagtgttt accgccgtgc
     1141 tgtttgcaaa aaaatcactg aaaccgaccg cttgcgagct ggcggcggtg acggtagcct
     1201 tgattggctc gattgtcgcc cctgtggcat tgactgccga cctgcaccaa ccgagccgta
     1261 ttctgcattt ctacaccgat tttgcgtggc gatctccaat ggcgtgggga gcgattatcc
     1321 tgcccctgtt cagcgtggcg gtagcgggtt attttgtgct ggcattggct caccataccc
     1381 ggccgaacct gccgaaatgg ttagcgtggc tacagttgcc gatactgcaa aatcaaggct
     1441 tgctttgggc attccgcctg tttgccacac tcaccgctat cggcattatc ggctacaccg
     1501 tgcttgaaac ctaccaaacc ggcacaagaa ccttatggca cagtgcgtgg ctgctgccga
     1561 ttatgctctt ttctgcgtgg gcggtggcat tggggcttac ccaagcggtc tgcaaaatgc
     1621 tgttccacac ccaaaccaac acggggctat ggacaaaact ctgcctgatt ttaaccgcac
     1681 tttcgcttgt cggactagca ttcagtagtc cacaagccac acaagatttt gcccagctct
     1741 tcaatggctc aatcaccgct taccttgtcg gcattttctg gctaattgcc ctcatttgca
     1801 atttttctgc caaaaaccac cgcttgcaat ggctcggcgt gcttgccctc atcgctttcg
     1861 gctggctact ccgctgggta ctggtgatcc aagtccaaac cattgccaaa accaatgcct
     1921 tgcaaaatcc atatcatttc gattggacag ccgtcgatgg tggtttgggg attgtctcga
     1981 tttttgggct aacggtgcta gtaagtatcg tggtatggca actgatttta ataatttgtg
     2041 ggggaagaaa aggtgaacaa taaacgcaga aatctgttga aaggcgggct ggcacttggt
     2101 ggggcggcgg cgtttggggc cgggtattcg ccgaaggtgt cggagattgc caaaggggtg
     2161 atgcacggca catcgggcga gaaaacccgt gatgcaattc acggtaattc gctcacgccg
     2221 gagtatcagg taaaagacgg caaactgctc agcaatcctg agcaaattgt gtgcaataca
     2281 cagtgtatgg gctgttggac gcagtgtggc attcgggcga gggtggattt gaacaccaac
     2341 caagtgattc gcatttcggg caatccgtat cacccgcttt cctccgacaa aaccctgccg
     2401 ttcggtatgc cgattgccaa ggcggaactg ttgctggcgg gcgaaagtgg cattgaaaat
     2461 cgctccaccg cctgtgctag aggggcggcg ttcttggagg gggtgaacag cccgtatcgg
     2521 attacccaac cgttgaaacg ggtcggaaaa cggggcgaag gcaagtggca gaccatcagc
     2581 tttgagcagt tggtggagga aatcatcaat ggtggcaacc tatttggtga aggcgaagtg
     2641 gagggcttga agacgatccg caatctggtc gatccgatta acccgaaaca gcctgatttg
     2701 ggaatgaaag caaaccagct tttagttact tttgccggcc ccgaaggtcg tcagccgatt
     2761 ttgcaacgct ttgcccaaaa gagcttcggc acgatcaact tttccaacca cggggcttat
     2821 tgtggcgctg cgtaccgtgc cggttcgggt gcctttatga aagattttga caaccaacaa
     2881 cacgccaagc cggactggga tcacgctgaa tttattctgt ttatcggcac gtctccggca
     2941 cagtcgggca atccgtttaa gcgtcaggct cgccagcttg ccaaacgccg ccctgatgac
     3001 aatttcagct atgtggtggt ttcccctcgt ttggagatga cctcctccct cgccacccaa
     3061 aacaaccatt gggtgccgat taagcccgag ggcgatttgg cgttggtaat gggaatgttg
     3121 cgttggatta tcgaaaacga gcgtttcaat gctgactacc tctcccgccc aagtctggca
     3181 gcgatggaaa atgccggcca cgtcagctat gccaatgcgt cacatctgat tatttgcgaa
     3241 ccgaaccacc cgaaattcgg gcaggcgttg cggattagcg atctgcaaga tgtgcaactc
     3301 gaccccgaag agaaagtgga agaaaacctg attgtggtaa aagatcaggc aagcggcgaa
     3361 ctcatttcag caaaagattg cttacaagcg gtcatttttg tcgaacaaat tgcaaaactg
     3421 cttgatggct cggaagtgtt ggtgaaatcc tcaatgcagt tgctgaaaga ggcgacacaa
     3481 gagaaaaccc ttgccgaata tagcgacatt tgtggcgtgc cggtgcaaac cattgaaaac
     3541 ttagcgaaaa aattcacttc gcacggtcat aaagccaatg ccatcactca cggcggcacg
     3601 atgcacagca ccggttttta taccagttgg gcgattttgt tgctgaatgc aatggtcggt
     3661 aacctcaaca aaaaaggcgg aatggcagta gccgcaggca aattcaaaga tttcggggac
     3721 gggcctcgct acaatttagc gaacttcccg aatgaagtga agccaaaagg cacgaacctt
     3781 gcccgcagta aaaaggcgta ccaaaattca agcgaattta agcagaaagt gacgaagggc
     3841 gaaaatccgt atccggcaca aggggcgtgg tatccgttca ccggcgggca aactaccgag
     3901 atgtttacct caatggtgca gggctatcca tactttgcga aagcgtggat caaccatatg
     3961 gcgaaccccg tttacggctt aaccgctatg aacccgattg cgttggagaa attaaaagat
     4021 ccgaaaattc taccgctctt tgtctctatt gatgctttta tgaacgaaac cactgcactg
     4081 acggactaca tcgtgccgga cacccacaac tttgagagct ggggcttttc aacggcgtgg
     4141 ggcggtgtgc ctcaacgcac cagcaccgca cgccacccga ttgtgccgtc caaaaacgcc
     4201 aaaactgccg aaggcgacac catctgtatg gagaatttcg tgattgcggt ggcgaaaaaa
     4261 atgggcttgc cgggctttgg cgaaaatgcg attgccgatt tagaaggcaa ccgctatccg
     4321 ctccaccgta ccgaagatta cttcctacgg gcggcagcga acattgcctt tgccggtgag
     4381 aaacctgcac cggacgccag cgagcaagat ctgctgctca ccggcgtgca acggattatg
     4441 ccgaaaattg aacaaacgct aaaagccgaa gagcgattaa aagtggcgaa tgtgtattgc
     4501 aaaggcggac gttttgcccc acacgaaagt gcgtggaaag aggagaatat ggagttccag
     4561 tggaaaaact gcctgcaaat ttggaacgaa aacgtgtata aagcccagca ccacagcaac
     4621 ggtgaacact attggggctg ccctcgttat atgtcgccac gttttgcgga cggctccacg
     4681 ctggagcagc actatccgca gtcggaatgg ggctttaaac tgatttcgtt taaatcgaac
     4741 attatgagca gtattaccgc cccactgttg cgtctgctct cgatcaagcc tgagggctta
     4801 gtggcgatga accgtttaga tgcggaagaa aaaggcatta aacacggcga tgtggtgaaa
     4861 ctcagcaccc caaccgccgg cttgacggtg cagattgtgg tgttggacgg tatcgcccga
     4921 ggcacaatcg gcatcgaaca cggctacggt cataaacaga ttggggcaag ttcctacacc
     4981 attgacggcg tggaaattcc agccaacccg atgatcgcca aagggattaa cctcaacgac
     5041 ctcggcatta tcgaccacac caaagcggtc aaatccccgt gggtagattg ggtctgtggc
     5101 tcagcggtga gaaatggcat tccggcgaag gtagagaaat tagcctagcc gaacaagcgg
     5161 ttggttttgc agaaaaatgt gcaaaatcga ccgcttttat tgatgtaagg gacactgttc
     5221 cttatgcaaa ccagcattgc agagcgtaaa aaatcatact ctgcatttta atttattttg
     5281 gagaacctat gacttttgtc aaaaaaacag cactgagcct gattgcaacg gcacttttcg
     5341 ctacatcaag ttttgccgct gagcagagcc aataccaaca tattcgtaat gcaacggcga
     5401 aaattgaata tgccggcaag acgtttttgg ttgatccgta tttagcggag aaagatcgct
     5461 acttaccgcc gaatgcgaaa aaacgtaatc cgaccttgga tatgactgtg agcattgatg
     5521 aagtgttaaa tggcgtggat gcggtgatcg taactcacac tcaccacgct cactgggacg
     5581 atgtagcaca acaacgtgtg ccgaaaaatc tgccgatttt tgtgcagaat gccggtgatg
     5641 cccgtttaat ccgttcacaa ggctttaccg atgtgcgtgt ggtcggcaaa gataccccgt
     5701 ttgaaggcgt aaccttaacc cgaactcgtg gccagcacgg caccgatgcg atgtatgcga
     5761 acccgaaaat tgccgaaatg gtcggcgatg cgatggacgt agtgatgaaa gcggaaggca
     5821 aaccgaccgt ctatttggtg ggagatacca tttggaacca cgaaatcgaa cattcgttca
     5881 acacttacaa accagacttt gtggtgctga atgccggctg tgccaaacta ccaaactttg
     5941 aaggcagccc gattatgtgt accgaagatg tttccaaagc acacaaaatc gctccacaag
     6001 cgaaaatctt aactgtgcat atggacgccc tgccacaaac ctcaatcagc agtgatcaga
     6061 tgcgtgatta tgtacaaaaa gagggattaa atcgtgtaac tgtgccgaaa aacggtgatg
     6121 tgattaagtt ctagtagcta aactaacatt accaaaatgg tttaagtagc aataaatagc
     6181 gaagcgggtt aagccatcaa gccttaaccc acttttacca accatagtat atagttttag
     6241 atataattat cttctgtatt tacctgccat tgcttggtaa accgcattct cgttggtcaa
     6301 aatcgcatat tttgcattta aaatcgccaa ctgagaatta agctcggtat tcagtgcggt
     6361 aatccactca cggaactccg acaccccttg ttcataacgg tttttatagt atgaactgat
     6421 acgtttattt ttcgcattgg tatcttgaag gatttttaac gagcttctcg actgcgtata
     6481 actgtaataa taacggtcaa tttcatttaa ggctgaggta attttttgct catagtttaa
     6541 acgggcagtc acataatccg tttcagaaat ttttacgtta tttttaaccc gattccaatc
     6601 taagaacggt aaatccaatt taattaagcc gttacccaca gggttatctg ccacattgcc
     6661 gatattggtt gcactaccgg taatagaacc accgatggtt aaggttggga accagctttt
     6721 ctcggttgcg gttaaggttt taaatgcact ttgtaagcgt tgtaacgagc ctactacatc
     6781 agggcgatta gcaatggctg acactggcac atttaaatct accccttgca atttcacgct
     6841 cataatattc gggtaacgaa tgttaagcgg agtatttggc tgaacattta acaaattgcg
     6901 taatgtttgc tcggcaattt tttggttggt tttcagatca attacactat ttctggcgtt
     6961 taagaccgct tgttgagcct gatcaaccgc taaactatca atcgcaccgg cattcatttt
     7021 gttagttaaa atacggctga tttgctcata atggcgaatg ctctcttcgg taatacgaat
     7081 cgcatcacga tagtaagcta actggtagta agtagtcaca accgcattaa taatagataa
     7141 acgggtagct tttaagtctt caatggtggc tttatgcgtc cattctgccg cactggcggt
     7201 atcggctaaa cgtcgccata aatccacagt ataacttaaa ttaaatgcag cttgagctgc
     7261 ggttgttgaa acaccggtcg aaacattatt tgaagaagcc gaacctaaac ctttagccgc
     7321 agaaacagaa cctgaaccac taaaggttgg cactaaattt gcccctacta aattagcgtt
     7381 atacaaggct ttattgactg caattccgct tttggctaaa tcaaggttat ttttgatggc
     7441 taaatcaacc acacggttta attccgcatc cgtatagcct tgccaccatt gctcgttaat
     7501 ttgatattgt ttggtaattt catcatagct ttgataggtt tgctgtgctt gttgcaaagt
     7561 cccgtcattg ctcatattcc ctgtggtaca agccgttacg gttagagcca acgccacaga
     7621 aaatgctaat tttgaaagtt tcattacatt tccttttgaa aataaagagg ggaaaatggg
     7681 cgtattctac ccaaaaacag attgcctttc cagttaaatg aacaactgtt catttaatta
     7741 tttaacaaat cagtaatcaa atgctgatga cgaatttgtt gcgaacctaa gctcaaacgc
     7801 tcggcaatta aaatcgcttt tagctctgcc aatgcctgtt ggaaatcatc attaataatc
     7861 acataatcga actcattgta atggttcatt tccgacaccg cctctgccat acgtttggca
     7921 atggtttcag cggaatcttg cccacgcccg attaaacgtt tttccaattc tgtttttgac
     7981 ggtggcaaaa taaaaacggt tttcacattc ggcacttttt cccgaatttg tctagcccct
     8041 tgccagtcaa tatccaaaaa gacatcaatg ccctgctcta ggctacgttc aatcatcggc
     8101 aatgatgtgc cgtaataatt gccaaacacc tccgcccatt ctaaaaaata cccttgctca
     8161 atcagctgct taaactcatc gtgcgaagtg aaataataat gcacgccgtc ctgttctgcc
     8221 ggacgaggct gacgggtagt gtgtgaaatc gaaagctgta cttccgaacg gggtaaatcc
     8281 gccaacaagg cgttaattaa ggaagatttt cctgctccac ttggggcaga aataatataa
     8341 agattgccta aactcattat ttgtatatac ctatttgatt ttgggaatag ggcgaatgat
     8401 gattcgcccc tacatttcat aggaataaat aaaaaataat ggacaacttt cattgtccat
     8461 tacacaaaat tatctacgtg ccaaaggctg aacgaaggta atgcctaaat cccaaggctg
     8521 ctcaatccac gtttcttgtg gaatatcaat cacataatca tcaaccaacg gtgcaccgtg
     8581 cggtttcgca aacacggtta caaaacgagc tttcgggtac attctgcgaa tttcttttgc
     8641 cgtgttgccg gtatccacta aatcatctac cacaataaag ccttcgccat cggtatcggc
     8701 tgcgtgtaac acatttaact caccttggct atcgtgatcg tagctggcaa tgcacactgt
     8761 ttctacgtgg cgaataccca actcacgtgc taaaacggct gccggaaaca agccgccacg
     8821 gctcaccgca ataatccctt tccactgtgt ggcaggtaat aaattttctg ccaacttgcg
     8881 agcgtgcata tggaacatat cccacgtcac gacatatttt tcatttgtgt atttttcact
     8941 catagaaaca acctaatata aaattggggg ctaccccgat ataaaaaatt gcactaggat
     9001 aacccgaaaa tgcttttttc gccatcattt catttatttt tttgtgccgg cagctacgca
     9061 atcgtatgct tagcacaaaa aaccaacact aaaatagctt ttctaaagtg aaaaagactt
     9121 ccttgttttg gcgagagtaa aaatcagcaa tattgctgtc aattttttga taacggaaat
     9181 tcagcttcgg cacaatgccc tgccaatgcc aagtgcggtt ccaaaccgct aaattggctt
     9241 gatattccgt gtctaaccgc ttatagccaa acaaatagtg cttgtcggca aaatatcgct
     9301 tgccaaagcc gatacttgcc tgcgttgccc agcgttcgcc ttgaaaaacc gcccccactc
     9361 gagccagcca cttattcgag ctttgtgctt tttcccgtgc aatttcacgc acgccgtcta
     9421 aatttgcaaa aaaccgccca tttttgaccg cttgccactg cacaccgcca ctgagttggt
     9481 gctgatagct gttataacgg cttgcggtta gctcctcaaa ataccgtttt tgcaaatggg
     9541 taaaactccc cgacaccaac cattgcgaat taaggtaacg caaaccgttg agtgttgccc
     9601 caaattgaac attataacgg ctactcccca gccaattttg ctcaataaaa ggcgaaaaag
     9661 tcagccgata agcgacggtg cggtagctat aattcggcga aacggatacg gattgctcac
     9721 ggtaatctcg gttatcccaa tagtaaatcc cgctataatt gagcgttaaa ccgacaaaat
     9781 gattgccttt cacgttgtgc aatttactca accctaagcc ataacgcacg ccttttgctg
     9841 attgtggcaa actgtctgca tttttgcgga aaatccgccc atttacattc acaatcggcg
     9901 aagatgaggc attattcacg ttatctgttt gggtatattg cagataaaaa tcgggctgcc
     9961 acgcctcatt ttcagcaatt tggacttgag tattgcgggc aattttagca agttccggcg
    10021 gtaaatgggc ttgaatagcc ttaaattcct gctctgccgc acgaaattgc tgatcttctg
    10081 ccaaaatcaa cgccaaatca aaacgagggt aaaccaaact cgggggctta gctaacagtt
    10141 ggcgatagtg aaaaactgcg gtttgatgat cttttttcgc ataggcaagt gcggcttgcg
    10201 catagtgcca caacaacggg tcaaaatttt cagtttgcgg ataacggctt aaaagcggtt
    10261 caagcgttgc ccaatcttgg ctgagaatcg cttggttaat ttgctgttca acattctgat
    10321 tgactgaata cgcaggctga taagcggtcg gtttttgtga attttttaca acattttgct
    10381 caaatttaac cgcttgcggc tgacgctcaa aggaaatcgg gtcagtgttg tgttcaatca
    10441 ccttttctgc ccatacaacg gggctgaaca gcgaaaataa aaggggatat tttttcataa
    10501 agataaagaa aattggtagg ggcggaccta tatgttcgcc tctacgggat ttatcactct
    10561 ctccccttgt gggagagggt tattagaagc tgtaaattga aatctaaact attgtgtctt
    10621 atggtatcta caagcaatat caagacaaat gccgtttaat ttttcgttaa acggcattga
    10681 acgttagaaa aggttatttt tggatatcgc cacgagtgcc ggcaagtcca aaattactca
    10741 cttccccagt aagatttgct tttgtctgaa tttcaccggc aatttcctct gcatttttac
    10801 cgaaaaattc gactgtatat tttccagaaa ggtttaaagg attattgcca tgtactgttg
    10861 aagaaatctg agtattatta atcgtcccct cttctaatac gattaagttt ccaaattctc
    10921 cctcaactct acctgaaccg gtacgcttag agaaattaac attataggtt agatcaccac
    10981 cattaaaacc tttagctcca tcgtggttaa atgcttttcc tgaatatgtt gcagtaccct
    11041 ctgttggtaa tttctctgtt ttcaatcctt taactgtaac tgttccatca actttatcaa
    11101 tataattacc gttttcccag ccatttcttt gaactgcttg tgctgttact acagaatatg
    11161 gctgattata taaataactc tgtgttctga ctgtgacttt accctcaata gtttctttac
    11221 tattaccaag ttttaagccg taatttgtat catcaatacc ttttgcttta ataatagcta
    11281 taggatctac ttctttttct gctgctaaac gctccgcttc cgctttctct ttcgccgc
//
LOCUS       DANLXD010000087        11198 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.087, whole genome shotgun sequence.
ACCESSION   DANLXD010000087 DANLXD010000000
VERSION     DANLXD010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11198
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.087"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            101..1897
                     /locus_tag="PXD18_001948"
     CDS             101..1897
                     /locus_tag="PXD18_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate-specific subunit IIBC"
                     /protein_id="HDL6302345.1"
                     /translation="MDFLTEILLFLKDQVLNKAPFLLGIVACLGYILLKKDTSTIIKG
                     TIKTIVGFMIVQAGSGFLVTNFKPVIDGLAKYHQLTGAVIDPYTSMQSTIQTMGENYA
                     WVGYAVIGALFLNILLVVFRRLTGIRTIMLTGHIMFQQAGLVAVFYMIIGASMWETII
                     YTSVLMALYWGISSNIMYKPTQAVTGGAGFSIGHQQQIASWIAVKLAPKLGDKDDTVD
                     KMKLPNWLNIFHDSISATALVMTIFFGIILLSFGLDNLKELAGKTNQFMYILEMGLKF
                     AVAIQIIVTGVRMFVAELSEAFKGIAERLIPNSVLAIDCAAIYAFSPNAMVFGFMWGA
                     IGQFVAVGGLLAVGSPVLIIPGFIPMFFSNATIGVFANQFGGWKAVMKICFVMGIIEV
                     LGSAWVIQMLASQGTTFNGWMGMADWALFFPPILQGIISIPGFFFVIVAAAMVYMFFA
                     SKQLRAEEAEAAARGITLEQLDGYGLDEVKAEPKAEAVVQQAVENAENSANPIRILAV
                     CGSGQGSSMMMKMKIKGYLDKRGIPNIMDSCAVTDYKGKLSEVDIIVSSKHLANEIEV
                     PEGKAVLGVQNMLNPNSFGDELVELINQHNAK"
     gene            1977..3038
                     /locus_tag="PXD18_001949"
     CDS             1977..3038
                     /locus_tag="PXD18_001949"
                     /inference="COORDINATES: protein motif:HMM:NF012376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDL6302346.1"
                     /translation="MKKILSTLFMLSAVSVAVAKEVNIKLLGTSDVHGRVVPWSYGAD
                     VEDKSGSFAQIATYVKEVRANHKNVLLFDIGDAIQDNQVEEFAKTLDKAKNNPVPKVL
                     NAMNYDIFILGNHEFNFGMPNLDAILKDINAKILTANFYHKDGKRYVEPTTIIERDGV
                     KLGIIGLTTPMSAIFEKDTGHLDAMKFTSPIEEAKAQIADLKAKGVDAIIVLAHMGIE
                     NENNIPDTGVADLVNAVDGIDVIIAGHMHKDVPSETIKNTLITEPHRYGTVVSEVDLA
                     FDVNDKGEVKLLSKTAKTVPVKKLASDPEIEKIYQPYHNELRALNNVKIGETAQDLIP
                     QGKITVYRLLSRKTPECPH"
     gene            3026..3490
                     /locus_tag="PXD18_001950"
     CDS             3026..3490
                     /locus_tag="PXD18_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HDL6302347.1"
                     /translation="MSSLIHDVQQHYSGADVVSFAFDYETVRLDKGDIKKKDIIYNYR
                     YAGGDVSMYELTGKQLKQYMEWSADYFDTIQAGDKDYRYNAVRGKSKYVTFDLFGGVS
                     YNIDLRNPSGSKIVDLKLANGSLITDDGKYKVGMNSYRFGQLTKKGGIWEGQ"
     gene            3521..3637
                     /locus_tag="PXD18_001951"
     CDS             3521..3637
                     /locus_tag="PXD18_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ser/Thr protein phosphatase"
                     /protein_id="HDL6302348.1"
                     /translation="MGAEKGTIQNMLIDYITNVKGGKIEGKSHNRWAIIGLN"
     gene            3653..4120
                     /locus_tag="PXD18_001952"
     CDS             3653..4120
                     /locus_tag="PXD18_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDL6302349.1"
                     /translation="MNLKQSLIENNSILLNQSAANWEDAIKIGTDLLVKAGTIEPRYY
                     DNIVSKIKEMGPYIILAPGLAMPHARPEEGVIKTSFALVTFDTPIYFEGEDEPVHVML
                     TLAGSDSDQHMQGLVEITQVLDDPESDTGVDLDKIRRCKTAEEVYAVIDQALA"
     gene            4175..4855
                     /locus_tag="PXD18_001953"
     CDS             4175..4855
                     /locus_tag="PXD18_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HDL6302350.1"
                     /translation="MSKPLLQIALDSLSLEKAVADAKQAENQVEIIECGTILAFAEGM
                     KAVSTLRVLHPNHIIVCDLKTTDGGAILAKMAFEAGADWLTVSAAAHPATKAACKKVA
                     DEFNAAHPELKVKKEIQIEIYGNWTVEKDAKEWVELGVTQAIYHRSRDAELAGKGWTT
                     EDVELMKQLSDLGIELSITGGIVPEDIHLFKEIKNAKAFIAGRALVGEKGKQTAEAIR
                     VEIDKYWN"
     gene            complement(4923..6065)
                     /locus_tag="PXD18_001954"
     CDS             complement(4923..6065)
                     /locus_tag="PXD18_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HDL6302351.1"
                     /translation="MKIVIAPDSFKESLTALEVAQAIQQGFARVFPEAEYQLVPMADG
                     GEGSVQSLVDATHGSLQKISVIAPLANEVEGFFGLSGDQKTAFIEMAAASGLHLVPME
                     QRNPLVTTSYGTGQLIKAALDLGVEKIILGIGGSATNDGGVGMLQALGAKFLNAEQRE
                     IGFGGEALSQIQQIDLSGLDSRLKQVEFEVACDVDNPLCGERGASAIFGPQKGATPEM
                     VKMLDHALLHFAETVKSQLGIEIAEKAGAGAAGGMGGGLLLLPNVTLRSGVQIILEAT
                     DLAEKLADADLVVTGEGRMDAQSIAGKTPIGVAKVAKQFGKPVIAIVGSLKEDYPVVY
                     QHGIDAVFPIIRQVSNLEAVLKSGKENLISTAENVARLWKISALQE"
     gene            complement(6075..7454)
                     /locus_tag="PXD18_001955"
     CDS             complement(6075..7454)
                     /locus_tag="PXD18_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005757929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HDL6302352.1"
                     /translation="MSGIALILIFLVAIIIMIYMIAKWKVHPFLALMSISIALALVAG
                     LPLAKIPTIVGEGFSNTFKSIGIVIIFGAIIGTILEKTGAALKLADMVVKVVGQKRPE
                     LAMLIMGWVVGIPVFCDSGFVVLNPIREAIRKKILANPVGMAVALSAGLYASHVFIPP
                     TPGPIAAAGAVGLSHNLLLVIGMGFVVSIPVLIASYFFAKYVGKQVSVMEEAQADQVI
                     SQSYEDLIKQYGKLPSGFLSFAPIFMPIILMAIGSIAKIAGVSGDFGVFLQFVGNPII
                     ALAIGVIFAIFLLVSSGKMAEFDSLTNDTLKLVGPILFITAAGGVLGNVITQAGFVDY
                     IKQNAHIISTAGIFFPFLISAILKTAQGSSTVAIITTASIMGMFNAPDSLMNALGLTS
                     EMAAALTVMAIAAGSMCVSHANDSYYWVVTNFTKLTPQQGYRTQTTLTFIMGVVGMLT
                     VYLLSLILL"
     gene            complement(7576..8670)
                     /locus_tag="PXD18_001956"
     CDS             complement(7576..8670)
                     /locus_tag="PXD18_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6302353.1"
                     /translation="MKLNQAIADRIVKRTMQIIPNSVNVMDSEGVIIASGDVGRIGQR
                     HTGAVIALRNDQAVEIDENLAKQWCDEVKAGINLPLHYLGSTIGVVGISGQPQQVRQY
                     AQLVKMAAELIMQQAFELEQERWQRRYREEFVRALLKGSLSTAEIQQQAVFFGQDFAK
                     PLSVMVIKIHGSTAEKLQRLIDFFEHYFPSLLTAVIGLDKIALLNHLSNEKSLIRNAL
                     NKLNDPDISFKTVVGLAVENLSQTHISYQTACHTLNYAEQIQSRKQIIHFEDFKLPAL
                     LHSFSHSWEAKTLLSPFQALLVSDKKQVLLKSLRYYFFANCDLDHAAKKLFIHPNTLR
                     YRLEKIEQITGLSFNNIEQKFVLYLGAVLS"
     gene            complement(8774..9226)
                     /locus_tag="PXD18_001957"
     CDS             complement(8774..9226)
                     /locus_tag="PXD18_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HDL6302354.1"
                     /translation="MNLKAVAVSALAMSSVAMADIADVKPVVFESKFDFQTTVTTLTN
                     TLKEKGMTIFAEIDHQAAAKQAGLEMQPATVLVYGTPKAGTPLMVKDPMLALQLPLKV
                     LITEPNKGKVEVMLNRADQVVAHANTDYADVENNLAKAEKLIKATVAK"
     gene            complement(9247..9999)
                     /locus_tag="PXD18_001958"
     CDS             complement(9247..9999)
                     /locus_tag="PXD18_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HDL6302355.1"
                     /translation="MHFEKRSHWSGELGREMSFNVYGHAGKPVIVFPSSGGNENEYGN
                     FGMIEACRSFIERGLIKFYTPDSYDAESWLSKHKSGHDMALAHNAYDRYIIHELVPLI
                     RHESHWNGTMIATGCSMGAFHTVNFALRHPDLFDIAIALSGVYDARFFSGEFYGDKAV
                     YFNSPIDYVWGQNDDWFLDRYRQNHYVIAVGQGAWEEQHIEDTRRLQEAFNAKGIDAW
                     FDYWGFDIDHDWPTWRKQMPYFLGKLEEQGII"
     gene            complement(10010..11194)
                     /locus_tag="PXD18_001959"
     CDS             complement(10010..11194)
                     /locus_tag="PXD18_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HDL6302356.1"
                     /translation="MSRPLNFVMISPHFPTNFETFAIRLREAGFNTLGIADAPYESLS
                     ENLRHSLTEYYRVDNMEDYEQVYRAVAYFAHKYGRIDRIESHNEYWLELDAKLRTDFN
                     VFGYKSDDMLSIKTKAQMKEVFRKTGLKVAQGRVFKDDEDARKLAKQLKFPVIIKPNS
                     GVGASDTYKIKTAEELEAFFGYKTPTVEYIMEEFIDGDIITFDGLTDKEGNIVFYSSL
                     EYSEAVLDTVSKDGDMFYYVPCEISPKLVEMGKQCVKAFNVKERFFHFEFFRVKGSKK
                     EELLPLEINCRPPGGLTIDMWNYANDFDVFREFANIVKENKFYADIQHPWNVVYISRK
                     ANQNYVNSIEAVCEKFAGNIISVQSVPGVFAKVMGEQGILARTETMEQMREIAQFAQA
                     KQ"
BASE COUNT         3216 a         2581 c         2349 g         3052 t
ORIGIN      
        1 aaaataatct tttttaatct ttttctagcg tttatcatta attccgacaa cttctctgga
       61 gttttttagt tctattaatc tctcaacaaa gaggccccct atggactttt taaccgaaat
      121 tctccttttc ttaaaggatc aagtgctgaa taaagcaccc ttcttactag gtatcgtagc
      181 ttgcttaggt tacattcttc ttaaaaaaga cacttctacg attattaaag gcacaattaa
      241 aacaattgtc ggttttatga ttgtacaagc cggttcaggt ttcttagtaa ccaactttaa
      301 gccggttatt gatggcttag ccaaatatca ccaacttacc ggtgcagtaa ttgaccctta
      361 caccagtatg caatcgacca ttcaaaccat gggcgagaac tacgcttggg ttggttatgc
      421 cgtaattggg gcgctgttcc tcaatattct attagtggtg ttccgccgtt taaccggtat
      481 ccgtaccatt atgctcaccg gtcacattat gttccaacaa gcaggcttgg ttgcggtgtt
      541 ctatatgatc atcggagcgt caatgtggga gaccattatc tacacctcag tgttgatggc
      601 tctttattgg ggtatttcgt ctaatattat gtataaacca acccaagcgg taacaggcgg
      661 tgcaggcttc tcaattggtc accaacaaca aattgcttct tggattgcag tcaaactcgc
      721 accaaaactt ggcgataaag acgatactgt agataaaatg aaattgccta actggctcaa
      781 tattttccac gacagtattt ctgcaaccgc attagtaatg accatcttct ttggaatcat
      841 cttactttca ttcggtttag ataacctcaa agaacttgct ggcaaaacca accagtttat
      901 gtacattctt gaaatgggct tgaaatttgc ggtggcaatt caaatcattg taaccggcgt
      961 acgtatgttt gtagctgagc tttcagaagc cttcaaaggt attgctgaac gcttaattcc
     1021 aaactcagta ttagcgattg actgtgccgc tatctacgct ttctcgccaa atgcgatggt
     1081 attcggcttt atgtgggggg ctatcggtca atttgtggca gtaggcggct tgcttgcagt
     1141 aggctcaccg gtgcttatta ttccgggctt tatcccgatg ttcttctcta acgcaaccat
     1201 tggtgtgttt gcaaaccaat ttggtggttg gaaagcagta atgaaaatct gttttgtgat
     1261 gggtattatt gaagtgcttg gctcagcttg ggttattcaa atgcttgctt cacaaggcac
     1321 aacctttaac ggttggatgg gtatggctga ctgggcattg ttcttcccac caatcctaca
     1381 aggtattatc agcattccgg gcttcttctt tgtaattgtg gcagcagcaa tggtttatat
     1441 gttcttcgca tctaaacaac ttcgtgccga agaagcagaa gcggcagctc gtggcattac
     1501 acttgaacaa ttagacggct acggcttaga tgaagtaaaa gcagaaccaa aagcggaggc
     1561 agtagtacaa caagcggtcg aaaatgccga aaattctgca aacccaatcc gcattctagc
     1621 ggtgtgtggc tctggtcaag gctcatcaat gatgatgaaa atgaagatca aaggctatct
     1681 cgacaaacgt ggtattccga atattatgga ttcctgtgcg gtaactgatt acaaaggcaa
     1741 attaagcgag gttgatatta ttgtctccag caaacattta gccaacgaaa tcgaagtacc
     1801 ggaaggcaaa gcggtattag gtgtacaaaa tatgctaaat ccaaactcat ttggtgatga
     1861 attagttgag ctaatcaatc agcataatgc aaaataagta agtttagggg tgaataatca
     1921 cccctatcta tgctaaagat tgtaaaaact cacttcatca aacgaggaat tatccaatga
     1981 aaaaaatctt atccaccctg tttatgctct ccgcggttag cgttgccgtt gccaaagagg
     2041 taaacattaa actacttggt acctcagacg ttcacggacg tgttgtgccg tggagctacg
     2101 gggcagacgt ggaagacaaa tccggctcat tcgcccaaat tgcaacctat gtcaaagagg
     2161 tgcgtgccaa ccacaaaaat gtgttgctgt ttgatattgg cgatgcgatt caagacaacc
     2221 aagtcgaaga gttcgctaaa accttagaca aagcgaaaaa caatcccgtg ccgaaagtgc
     2281 tgaatgcaat gaattacgac atcttcattc tcggcaacca cgaatttaac ttcggaatgc
     2341 cgaatttaga tgcgatttta aaagacatca acgccaaaat tctcactgcc aacttctatc
     2401 acaaagacgg caaacgctac gttgagccaa ctaccatcat tgaacgtgat ggcgtaaaac
     2461 ttgggattat cggcttaacc accccaatgt cggctatttt tgaaaaagac accggtcatt
     2521 tagacgcaat gaagttcact tcgccgattg aagaggcgaa agcccaaatt gccgatctca
     2581 aagccaaagg cgtggacgcc attattgtgc tggcacatat ggggattgag aacgaaaaca
     2641 acattcccga caccggcgtg gcggatttag tgaatgcagt ggacggtatt gatgtaatta
     2701 tcgccggcca tatgcataaa gatgtgccga gtgaaactat caaaaatacc ctgattaccg
     2761 aaccgcaccg ctacggcaca gtggtttccg aagttgatct tgcctttgat gtgaatgaca
     2821 aaggcgaagt gaaactactt tctaaaaccg ccaaaaccgt accggtgaag aaactcgcaa
     2881 gcgatccgga aatcgaaaaa atttaccaac cgtatcacaa tgaactgcgt gccttaaaca
     2941 acgtcaaaat cggtgaaact gcacaagatt taatcccaca aggcaaaatc acggtgtatc
     3001 gattgctttc tcgcaagaca ccggaatgtc ctcattgatc cacgatgtgc aacaacatta
     3061 cagcggtgca gacgtagtga gttttgcatt tgactacgaa accgtgcgtt tagacaaagg
     3121 cgacatcaag aaaaaagaca tcatctacaa ctaccgctat gccggtggcg atgtgagcat
     3181 gtatgagcta accggcaaac agcttaaaca gtatatggaa tggtcagcgg attacttcga
     3241 caccattcaa gccggtgaca aagactaccg ctacaacgct gtgcggggta aatctaaata
     3301 cgttaccttc gacctattcg gcggcgtaag ctacaacatc gacctacgca atccaagcgg
     3361 tagcaaaatt gtcgatctaa aactggcaaa cggcagtcta atcaccgatg acggcaaata
     3421 caaagtggga atgaactcct accgctttgg tcagctcacc aaaaaaggcg gcatctggga
     3481 aggacagtaa atccccgtga tttgggaatc caaagtcgcc atgggggctg aaaaaggcac
     3541 aatccaaaat atgctgattg attacatcac caacgtcaaa ggcggaaaaa tcgaaggcaa
     3601 atcgcataac cgctgggcga ttatcggctt aaattaacga aagggaaaca ctatgaactt
     3661 aaaacaatct cttattgaaa ataactctat tttgctcaat caatcagcgg cgaattggga
     3721 agacgcaatc aaaatcggca ctgatttatt agtcaaagcc ggtacgattg aaccacgcta
     3781 ttacgataat attgtaagca aaatcaaaga gatggggcct tatattattc ttgcaccggg
     3841 cttggcaatg cctcacgccc gtccggaaga aggtgtgatt aaaacctctt tcgctttagt
     3901 gacttttgac accccgattt attttgaggg cgaagatgag ccggttcacg ttatgctaac
     3961 ccttgcaggg agtgactctg atcagcatat gcaaggcttg gtagaaatca cccaagtgct
     4021 agatgaccca gagagcgaca caggtgttga tttagataaa atccgccgct gtaaaacggc
     4081 tgaagaagtg tatgcagtaa tcgatcaggc attagcctaa tattctacaa gcggttcaaa
     4141 aacatcaata ttttgcaaat agaggaatac aattatgtcc aaaccattat tacaaattgc
     4201 ccttgattct ctttcactgg aaaaagcggt ggcggatgca aaacaagcag aaaaccaagt
     4261 cgaaattatt gaatgcggta ctattcttgc ttttgctgag ggtatgaaag ccgtttccac
     4321 cttgcgtgta ttgcacccaa atcacattat tgtgtgcgac ttaaaaacca ccgatggcgg
     4381 tgcaatttta gctaaaatgg catttgaagc cggtgccgac tggctcacgg tttcggctgc
     4441 ggctcaccct gcaaccaaag cggcttgcaa aaaagtggcg gacgaattta acgctgctca
     4501 cccggagcta aaagtgaaaa aagagattca aattgaaatc tacggcaact ggacggtgga
     4561 aaaagatgcc aaagagtggg tagaattagg ggtaacccaa gcgatttacc accgctcccg
     4621 tgatgcggaa ctagcaggta aaggttggac aacggaagat gttgagttaa tgaaacagct
     4681 ttctgactta ggcattgaat tatctatcac cggcggtatc gtaccggaag atattcacct
     4741 gttcaaagag atcaaaaacg ccaaagcctt tattgcaggc cgtgctttag tcggtgaaaa
     4801 aggcaaacaa actgccgaag ccattcgtgt ggagattgat aaatactgga actaatccgg
     4861 cattgaaacc caataaaaat ggcgttctct caaccggaac gccatttttt atctcatttt
     4921 ttctattctt gcaaggccga tattttccac aatctcgcta cattttcggc agttgaaatc
     4981 aggttctctt tgcctgattt taacaccgct tctaaattgc tgacctgtcg aataatcgga
     5041 aataccgcat caatgccgtg ttggtacacc acagggtaat cttctttcaa tgagccaact
     5101 atcgcaatca ccggcttgcc aaactgctta gcgactttcg ccaccccaat cggggtttta
     5161 ccggcgatag attgagcgtc cattcgccct tcccctgtca ccaccaaatc cgcatcggca
     5221 agtttctcag caagatcggt tgcctcaaga ataatttgca cgccggaacg taatgttacg
     5281 ttaggcagta gcagtaaacc accgcccatt ccaccggctg caccggcacc ggctttctcg
     5341 gcaatctcaa tgcctaattg ggattttacg gtttcggcaa aatgcaacag ggcgtggtcg
     5401 agcattttaa ccatttccgg tgtagctcct ttctgtggcc caaaaattgc cgaagcccct
     5461 cgctcgccac acagcggatt atcgacatcg caagcaacct caaattccac ttgctttaag
     5521 cgtgaatcca aaccgcttaa atcaatctgc tgaatttggc ttaatgcctc gccaccaaag
     5581 ccgatttccc gctgttcggc atttagaaat ttcgctccta aggcttgtag cattccgaca
     5641 ccgccatcgt tagtcgcact gccgccaatg ccgagaatga ttttttccac ccctaaatct
     5701 aaggcggctt taattaactg ccccgtgccg tagctggtgg taaccagcgg atttcgttgc
     5761 tccattggca ctaaatgcaa gccacttgcc gccgccattt caataaaggc ggttttttga
     5821 tcccccgaca agccaaaaaa gccctccacc tcatttgcaa gcggtgcaat tacgctgatt
     5881 ttttgcaaac tgccgtgagt ggcatcaacc agcgactgta ccgagccttc gccaccgtct
     5941 gccatcggta cgagctgata ctccgcctca gggaaaacac gggcaaaacc ctgttgaatt
     6001 gcttgagcca cttctaatgc ggtcaaactc tctttaaatg aatccggtgc aatcacaatt
     6061 ttcatcgtca atccttagag taaaatcaat gaaagcagat aaaccgtgag catacccacc
     6121 acacccataa tgaaagttag ggtagtttgc gtacgatagc cttgttgcgg agtcagttta
     6181 gtaaagtttg ttaccaccca gtagtagctg tcattggcgt gggaaacgca cattgagcca
     6241 gccgcaatcg ccattacggt taaggctgcc gccatttcac tggttagccc taaggcgttc
     6301 attaatgagt ccggtgcgtt gaacattccc ataatggagg cggtggtgat aattgccacc
     6361 gttgagctgc cttgtgcggt ttttaaaatt gccgaaatca ggaacgggaa gaaaatccct
     6421 gctgtactga taatatgagc gttttgcttg atgtaatcca caaagccggc ttgagtaatc
     6481 acgttaccta gcacaccacc ggcggcggta ataaagagaa ttgggccgac taatttcagg
     6541 gtatcattgg ttaagctgtc aaattccgcc attttaccgc ttgaaaccag taggaaaata
     6601 gcgaagatca ccccaattgc taacgcaata atcgggttgc cgacaaattg taggaatacg
     6661 ccgaaatcgc cacttacacc ggcaattttg gcaatcgagc cgatagccat taagataatc
     6721 ggcataaaaa tcggggcaaa gcttaaaaac ccacttggta atttgccgta ttgtttgatc
     6781 agatcttcat agctttggct gattacttga tccgcttgag cttcttccat cacgctgact
     6841 tgtttgccaa catatttggc aaagaagtaa ctggcaatca acacaggaat cgaaaccaca
     6901 aagcccattc cgatcacaag caggagatta tggcttaaac caacagcacc ggctgctgca
     6961 atcgggcccg gtgtcggagg aataaagacg tgggaggcat ataaaccggc acttaacgcc
     7021 accgccattc ccaccggatt ggcaagaatt tttttgcgaa tagcttcacg aatcgggttt
     7081 aacaccacaa agccgctatc acagaacact gggataccaa ccacccagcc cataatcaac
     7141 attgccagtt cagggcgttt ttgccccacc acttttacca ccatatcggc taatttgagg
     7201 gctgcaccgg ttttttctaa aatcgtgccg ataatcgccc caaaaataat cacgataccg
     7261 atacttttga aggtattact aaaaccttcg cccacaatag ttggaatttt ggcaagcggt
     7321 aaacctgcca ctaatgcaag ggctatcgaa atcgacatta aggctaagaa cgggtgaact
     7381 ttccacttcg caatcatata aatcattatg atgatagcga ccagaaagat cagaataagt
     7441 gcaatacctg acataataag tctcctcatt gtagaaaaat gaacttatta ttcggtattt
     7501 attgctaaaa agatttagat aaatttgcaa aaaatttgtt aaaaacgacc gcttgtttgt
     7561 atatttttac aatttttacg acagaaccgc tccaagatac agcacaaatt tttgctctat
     7621 gttattgaaa gataaaccag ttatctgctc aatcttctct aaacggtaac gtagcgtatt
     7681 tgggtgaata aacaattttt tggcagcgtg atccagatca caatttgcga aaaaatagta
     7741 acgcagactt ttcagtaaca cctgtttttt atcggaaacc agtaaagctt ggaacggcga
     7801 gagcaaggtt ttcgcttccc aagagtggct gaaactgtgc aagagggccg gcagtttaaa
     7861 atcttcaaaa tgaataatct gcttacggct ttggatctgc tcggcataat tgagggtatg
     7921 gcaggcggtt tggtaggaaa tatgggtttg cgataaattt tcgaccgcca gcccaaccac
     7981 cgttttgaag gaaatatccg gatcgttaag tttgtttagt gcattgcgga ttaacgattt
     8041 ttcgttggat aaatgattca gcaaggcaat tttatctaac ccaatcacgg cggtgagtag
     8101 gctcgggaaa taatgttcga aaaaatcaat caggcgttgg agtttttccg cagtagagcc
     8161 gtgaatttta atcaccatca ccgacagcgg ttttgcaaaa tcttgcccga aaaagaccgc
     8221 ttgttgctgg atttctgctg tgcttaggct acctttgagc aaggcccgca caaactcttc
     8281 ccgatagcgg cgttgccaac gttcctgttc caactcaaac gcttgctgca taatcagctc
     8341 cgccgccatt ttcaccaatt gagcatattg ccgaacttgt tgtggctgcc ctgaaatccc
     8401 cactacacca atggttgagc ctaaatagtg aagcggtaag ttaatgcccg ctttcacttc
     8461 atcgcaccac tgttttgcaa gattttcatc aatttcgacc gcttgatcgt tgcgtaacgc
     8521 aatcaccgct cctgtgtgtc gttgcccgat acgaccgaca tcgccggaag caataatcac
     8581 cccttcacta tccatcacat tgacggagtt gggaataatc tgcatcgtgc gcttgacgat
     8641 gcggtcggca atcgcttggt tgagtttcat tatatgattc ctactcattc ccaatactat
     8701 gaaaaatccc tctttcgagg gatttgcaaa ttatctacgc ttccacttcc tgagaataga
     8761 tcatagcgtg aagttatttt gccacagtcg ctttaattaa tttttccgct ttggcaaggt
     8821 tgttttctac atcagcataa tcggtattag cgtgagccac cacttgatcg gcacgattta
     8881 acattacttc gaccttgccc ttgttcggtt cggtaattaa cacttttaac ggtaattgca
     8941 acgctaacat cggatctttc accattaatg gcgtaccggc tttcggtgtg ccgtaaacca
     9001 atacggttgc cggttgcatt tctaagccgg cttgttttgc cgccgcttgg tgatcgattt
     9061 cggcaaaaat cgtcattcct ttttctttta aggtgttggt taaagttgtg actgtagttt
     9121 ggaaatcaaa tttactttca aataccaccg gtttgacatc ggcaatatct gccattgcca
     9181 cgctgctcat tgctaatgca gaaactgcga ctgcttttaa gttcatttct tttctcctca
     9241 aatagattaa ataatccctt gttcttccaa cttgcctaag aaataaggca tctgtttacg
     9301 ccaagtcggc cagtcatggt caatatcaaa gccccagtag tcaaaccaag catcgatccc
     9361 ttttgcgtta aaagcctctt gtaatcggcg ggtgtcttca atatgctgtt cttcccacgc
     9421 accttgtccg actgcaatca catagtgatt ttggcggtag cggtctaaga accaatcgtc
     9481 attttgaccc catacataat caatcggcga gttaaaataa accgctttat cgccataaaa
     9541 ctcaccactg aaaaagcgag cgtcataaac accgcttaag gcgatggcaa tatcaaacag
     9601 atccggatga cgtaaggcaa agtttaccgt atggaaagcc cccatactac aaccggtggc
     9661 aatcatcgtg ccgttccagt gcgattcatg gcggattaac ggcactagct cgtgaataat
     9721 ataacggtcg taagcattat gagctaatgc catatcgtgt ccggatttat gtttagataa
     9781 ccaagattcc gcatcgtaag aatcaggcgt gtaaaatttg attaagccac gttcaataaa
     9841 ggaacggcaa gcctcaatca ttccaaaatt accatactcg ttttcattgc cgccggagga
     9901 agggaaaaca ataaccggtt tacctgcgtg tccgtaaacg ttgaacgaca tttcacgacc
     9961 taattctcca ctccagtggc ttcttttttc aaaatgcata cttcacctct tactgtttag
    10021 cttgtgcaaa ttgtgcaatt tcacgcattt gctccattgt ttcggtacgg gctaaaatgc
    10081 cttgttcgcc catcactttg gcaaatacgc ccggtacgct ttgcacgctg ataatattgc
    10141 cggcaaattt ctcacaaaca gcttcaatcg aattcacata attttggttt gccttgcggg
    10201 aaatataaac cacgttccaa gggtgctgaa tatcggcata gaatttgttt tctttcacaa
    10261 tattggcaaa ttcacggaac acatcgaaat cgttggcgta gttccacata tcaatagtta
    10321 agccacccgg cggacggcag ttgatttcga gtggtaacaa ctcttctttt ttgctccctt
    10381 taacacggaa gaactcaaaa tggaaaaaac gctcttttac gttaaaggct ttcacacatt
    10441 gtttgcccat ttccactaat tttggcgaaa tttcacatgg gacatagtag aacatatcgc
    10501 catcttttga aacggtatct aataccgctt ctgaatattc aaggctggag tagaaaacga
    10561 tattgccctc tttatcggtt aaaccgtcaa aggtaataat atcgccgtca ataaactctt
    10621 ccataatata ttcaaccgtt ggcgttttat aaccgaagaa agcttctaac tcttccgcag
    10681 ttttgatttt gtaagtatcg cttgccccaa cccctgaatt tggcttgata atcaccggga
    10741 atttaagctg ttttgctaat ttgcgggcat cttcatcatc tttaaatact cgcccttgtg
    10801 ccactttcaa gccggttttg cggaatacct ctttcatttg ggctttggtt ttaattgaga
    10861 gcatatcatc gctcttataa ccaaacacat tgaaatcggt acgcaatttc gcatctaact
    10921 ccagccaata ttcattgtgc gattcaatgc ggtcaattcg cccgtattta tgggcaaagt
    10981 acgcgaccgc acgataaact tgttcgtaat cttccatatt atctacacga taatattcag
    11041 tcagggaatg acgcagattt tcgctcaatg attcataagg ggcatctgca attcccaatg
    11101 tattaaaacc ggcttcacgc aaacgaatgg caaaggtttc aaagttcgtt gggaagtgcg
    11161 gggaaatcat cacaaaatta agtggtctag acatagtt
//
LOCUS       DANLXD010000088        11169 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.088, whole genome shotgun sequence.
ACCESSION   DANLXD010000088 DANLXD010000000
VERSION     DANLXD010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11169)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11169)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11169
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.088"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..547
                     /locus_tag="PXD18_001960"
     CDS             <1..547
                     /locus_tag="PXD18_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL6302357.1"
                     /translation="EIDIKSKNGKVAKQFCQRKNLPLYITEISKERIRRAGKQILQNN
                     PENRPLDVGFKVFKLTESHFKQWQSPTSENLADQLEMFIDPVSEKADTQAVLYELLLR
                     LGLKLTAKVRLENKVFWVEENGLIFALLLNAADEEIIQTVIAQQPKKVIALDRLFNGN
                     DARKKNTELQMQDAGITFFVI"
     gene            557..3192
                     /locus_tag="PXD18_001961"
                     /pseudo
     CDS             557..3192
                     /locus_tag="PXD18_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612131.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
     gene            3324..5756
                     /gene="gyrB"
                     /locus_tag="PXD18_001962"
     CDS             3324..5756
                     /gene="gyrB"
                     /locus_tag="PXD18_001962"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HDL6302358.1"
                     /translation="MSEQTQATSYDSSSIKVLRGLDAVRKRPGMYIGDTDDGTGLHHM
                     VFEVVDNAIDEALAGHCKDIIVTIHSDNSVSVQDDGRGIPVGIHPEEGVSAAEVIMTV
                     LHAGGKFDDNSYKVSGGLHGVGVSVVNALSSKLQLTIRREGHVHEQFYSLGEPDAPLA
                     IIGNTEKTGTSVRFWPSLDIFKNKTEFEYKILSKRLRELSFLNSGVSIKLIDERDGKE
                     EHFKYEGGIKAYVEYLNEGKTHIHNTPFYLTTEKDGIGVEISLQWNDSYNENVYCFTN
                     NIPQRDGGTHLAGFRGALTRALKNYMDNSGVLKKADANIDASGDDAREGLVAVISVKV
                     PDPKFSSQTKDKLVSSEVRGAVESSMNEALSDYLAENPDDAKNIVTKIIDAARAREAA
                     RKAREMTRRKGALDLGGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRDRKNQAI
                     LPLKGKILNVEKARFDKMLSSQEVATLITALGTGIGRDDYNLEKLRYHKIIIMTDADV
                     DGAHIRTLLLTFFYRQMPELIENGYIYIAQPPLYKVKKGKQERYIQDNDEMSQYEIDI
                     ALEGAGLYVSEDAPALSGVALENLIAQYNGVQKLIERLSRRYPTLLLNELIYSKPLSV
                     EFAKNQANMTAWSEQFVATLMAKEVGGSFYRINTLFNEERQIYEPEIIVTTHGMDSTY
                     RLDYNFINGNEYARIVALGNELNDLLSDSAYVVRGERRQEISSFAEALDWLVKESRKG
                     LTIQRYKGLGEMNPEQLWETTMDPVARKMLQVNITDAIAADKLFSTLMGDEVEPRRDF
                     IETNALYAQLDI"
     gene            complement(5809..6771)
                     /gene="cmoB"
                     /locus_tag="PXD18_001963"
     CDS             complement(5809..6771)
                     /gene="cmoB"
                     /locus_tag="PXD18_001963"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005707797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HDL6302359.1"
                     /translation="MIDFRPFYQQIATTDLSAWLETLPLQLKQWEKTTHADYAKWAKV
                     ADFLPNSTACINLKDKVESISSKPLSEGEVKQITHHLKQLMPWRKGPYHLHGIHIDTE
                     WRSDFKWDRVLPHLAPLKDRTILDVGCGSGYHMWRMVGEGAKMVVGIDPTELFLCQFE
                     AVRKLLGNDRRANLIPLGIEQMQPLAAFDTVFSMGVLYHRKSPLDHLSQLKAQLVRGG
                     ELVLETLVIDGDINDVLVPADRYAKMKNIYFIPSVAALINWLEKVGFKNVRCVDEAIT
                     TLEEQRKTDWLENESLVDFLDPNDHSKTIEGYPAPKRAVILANA"
     gene            complement(6868..8631)
                     /locus_tag="PXD18_001964"
     CDS             complement(6868..8631)
                     /locus_tag="PXD18_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     accessory protein YcaO"
                     /protein_id="HDL6302360.1"
                     /translation="MSEQTFITGKDAALEDSIATFQHKLKTLGFNIEEASWLNPVPNV
                     WSVHIRDADCPQCFSNGKGASKKAALASALGEYFERLSTNYFWADFYLGQEIANSEFV
                     HYPTEKWFPIDDEAIPPMEMMDEFLWEYFDPNGEITPELLVDLQSGNYDRGIVTLPYV
                     RQSDNETVYIPQSIIGNLFVSNGMSAGNTKNEARVQGLSEVFERFVKNRIITEAISLP
                     EIPQSVIDGYPTIKASIEKLEQEDFPILCYDASLGGEFPVICVILLNPNNGTCFASFG
                     AHPNFQVAFERTVTELLQGRSLKDLDVFAPPSFNNEDVADHANLETHFIDSSGLISWD
                     LFKRDADYPFVHWDFSGTTEQEFNNMMAIFNKHNQPVYIMDYEHLGVYACRILAPGMS
                     NIYPSDDLVYANNNMGMDWREILLDLPHFHHDAETYQELLDELDEQSIDDLTRVREFI
                     GVVAEKGSAMQTLRIGELKSMLHLALGNLEQASDWANWTANMNASVFSAERNNYYRCL
                     IQSIELFLDEERDSEQYRMVFEKMYGKQAVEAAWGAIQGGNPFHGLTASDESLENMTA
                     HQKLLNAYRKVQKAKVNPIAR"
     gene            8895..>11169
                     /gene="cas3"
                     /locus_tag="PXD18_001965"
     CDS             8895..>11169
                     /gene="cas3"
                     /locus_tag="PXD18_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated helicase Cas3'"
                     /protein_id="HDL6302361.1"
                     /translation="MEEHTIQSFYAHSGKLSDHSDWQTLLSHANNVGLLAAEFAAPFA
                     SQEIARCTGLLHDLGKYSERYQKRLHGGERVNHSTAGAKIAVERWGPLGKMMAFCIAG
                     HHAGLANGSGEGKNRSTLTQRLQEQFGYGHKDLPVLDAIWQQELNLPEKLPLPPLKPS
                     KNEPFFSYAFFIRMLYSCLVDADFLDTEAFYANLEKRPLERGNYPNLTALHQQFNQFI
                     AQFRERIATQTPNTQEAQRKAEVNRLRSEILDYAVSQAKQETGLFSLTVPTGGGKTFT
                     SMAFALEHAKQYGLCRIIYVIPFTSIIEQNAAEFRKAFGELGTEAVLEHHSTFDHDSL
                     PDKSSRDKLKLASENWDTPVVVTTAVQFFESLFADRSSRCRKLHNIVGSVIILDEAQM
                     LPLNLLRPIMAAIDELARNYQCSVVLCTATQPAIHQANGFYKGFENVREIAPNPTALF
                     EKLKRTTVKHIGIQTDVELQSKLADNPQMLIIVNNRRHARALYDSAKQLEGAYHLTTL
                     MCAKHRSQTLTEIRLRLKQNLPCRVIATSLIEAGVDVDFPLVMRAEAGLDSVAQAAGR
                     CNREGKRLSVESNVWVFQPEEQWKAPPELGLLSGCMRSTVQVHADDLLNPKAINHYFQ
                     AVYEAKGKELDKPNILKACHDAGQSLNFPFQKIAEDFRMITSHLIPVIIPFDQEAENL
                     IDRLRYADQVGGILRKLQPYTVQVPEKALAELYNAGRVETINETNFGKQFYCLIGMDL
                     YDEVAGLSWENVDFLESE"
BASE COUNT         3494 a         2188 c         2405 g         3082 t
ORIGIN      
        1 agaaattgat atcaagagta agaatggaaa agtagcaaag caattttgcc aaagaaaaaa
       61 tttaccacta tatataactg aaatttcaaa agaacgtatt cgccgtgccg gaaagcagat
      121 tttgcaaaat aaccccgaaa accgaccgct tgatgtaggt tttaaagtct tcaaactgac
      181 agaaagccat tttaaacaat ggcaatcgcc cacatctgaa aatttagccg atcaacttga
      241 aatgtttatt gatcctgtta gtgaaaaagc ggatacgcaa gccgttttat atgagctttt
      301 attgcgttta gggttaaaac tcacggcaaa agtgcggttg gaaaataagg tgttttgggt
      361 ggaagaaaac gggctgattt tcgccttgct gttaaatgca gccgacgaag aaattattca
      421 aactgttatc gctcaacaac cgaaaaaagt catcgcttta gaccgtttat tcaacggcaa
      481 tgatgcccgg aagaaaaaca ccgaattgca aatgcaagat gccggcatta cgttttttgt
      541 gatttaagga gaaaaaatgg aactccaatt tgaaacctta gagtatcaat tacaagccgt
      601 taatgccaca gtaaatttgt ttgtcggaca gccgaatgcc gcaactgaat tttcactcaa
      661 agcccaaaat gatatgcggt ttgtgccgaa tttaggcttg cagattagtg atgagcagtt
      721 acaacagaat ttggctaatc tgcaaaacag gcaaaaaatc gaccgcactt tgcttgtcga
      781 acagggaaaa aattttaccg tggaaatgga aactggtaca gggaaaacct atgtctattt
      841 acgcacgatt tttgaattaa accgtcaata cggctggcaa aaatttgtga ttgtcgtgcc
      901 gagtgtggca attcgtgagg gagtgttgca tacgttggaa actacaaaaa gccattttaa
      961 tacggtattt gataacccga gcgtcaatca aaaatttgaa tataaaagta accaaacttc
     1021 acgcttaaaa tcctttgcta gtgctaatca tattgaaatt ttagtgatga atattgatgc
     1081 tttcaccaaa gaaagtaacg tgattaatac cgtgaatgaa agcggtgatg ctccgatttt
     1141 ctatattcaa caggcgaatc cgattgtgat tattgatgaa ccgcaaaata tggaaacgga
     1201 gattcgccgt aatgcgattg agagtttaag tccgcttttc actttgcgtt attctgccac
     1261 ccataaaaat gcgtataacc cgatttttag cctcaatccg gtgcaagcct atgaaatggg
     1321 attagttaaa caaattgagg tagatagcgt attggcggaa aatgaggtaa atggagctta
     1381 tctttccctc aaagagatta aaacaggggc aaaaagctgg tcggcaaaaa tcgaaatttt
     1441 atttaacgat aaaaaagcga tgaaaaagaa agtgattagc gtgaaaccga atcaggattt
     1501 gtatgagctt tccaaccaaa atgaaatgta tcgttcaggg tttatattaa gcggaatgga
     1561 taccgatagc caaatggtta gcttctccaa cggcacacaa atttttcaag gggcggaaca
     1621 ttcccaactt aaagaagatg tgcaaaaaat gcagattcgc cgcactattg gcgagcattt
     1681 gcaaaaagaa aagaaattac gaccgcttgg gatcaaggtg ttgtctttgt tctttatcga
     1741 taaagtggat aattatcgcc cttctgcaca aagccctacg gggggaaatt tgcaaaatgg
     1801 tttgaggaaa tttatttgga gctagccaaa gaagagcctc aaggcgtgca taacggttat
     1861 ttctcacagg ataaaaaagg cgtagcaaaa gatactaatg gcacaacgca agcggataac
     1921 gagacttatc aactgattat gcgggataaa gaaaaattgc tttcgctgga gaatccgtta
     1981 cggtttattt tctcgcattc tgccttaaaa gaaggatggg ataatccgaa tgtgtttcaa
     2041 atttgtactt taaacgatac tgcaagcgaa atgaaaaaac gccaagagat tgggcggggc
     2101 ttgcgtttgc ctgtgaatca acaaggattg cggatttatg atcgtcatct aaatacgctg
     2161 acaattatcg caaatgaaag ttacgaacaa tttgccgcca cattacagcg tgaaattgag
     2221 gaagattgtg gtgtacagtt tgccaaaagc aatgttaaaa aacgggaaga taaaaaagcc
     2281 gttcgctacc gtaaagattt cagcttacat ccggaatttg cggcaatttg ggaacggatt
     2341 aaacaccaaa ccacttatcg ggtagatttc agtaatgcgg aattgattga aagtgcggtg
     2401 gaaaaaatcc gcaaaatgcc cgatatcgag gcgacaaaaa ttaagcattc caaagtgaaa
     2461 ttggaaatga atgaaacagg gatttcaact aattatcgct catctaatga aacagcggta
     2521 aatacacaat gggcgatacc tgatttattg agtgagattc aaaagaaaac cgggctgacg
     2581 cgtgcgaccc tttgcaaaat tttacaaaaa tccgaccgct tgcaagaagt cttccgcaat
     2641 cctcaacgct ttattgattt aattgcagag aaaatcaacc ttgctttaca acaaattatg
     2701 acagacgggg tggaatatca caaaattgcc ggaaaaacct atgaaatgac gttattcggc
     2761 gattttgatt tttacctcaa tcaatatact tttgaagttc aagataaaac aaaaacgatt
     2821 tatgaagact atattgcact ggattcccaa acagaaaata tcttcgcccg acattgtgaa
     2881 tctagtgagc aagtggagtt ttattttaaa ttacccaaac gttttaaaat tccaacgcca
     2941 ttaggcagct ataatcccga ttgggcagtt gtgtttaagg gagaaaataa aatttacttg
     3001 gttgccgaaa cgaaaaatac aggcaaaggt attcaagcag gagtagatga agaaaaatta
     3061 gatgaaagtg aacgaatgaa aatcgactat gcccgtaagc atttcaaagg cttacagaga
     3121 gattataagg atttggatta tagggttgta cagaaagtgg aggagctgtc tgcggagtat
     3181 tgtaaaattt aatctgtggt cttgtagaat tgagatagac tgcaatttca actaaaattt
     3241 aaccgcttgt tttgcgatac ttttacgcat ttttctgcta taatcggcac aattttttcg
     3301 atttcaaatt agtaggaata agaatgtctg aacaaactca agcaacaagt tatgattctt
     3361 ccagtattaa ggtgttacgc ggcttagatg cggtgcgtaa acgcccggga atgtatatcg
     3421 gcgataccga tgacggtacg ggcttacacc atatggtgtt tgaggtggtt gataatgcga
     3481 ttgacgaagc attagccggg cattgtaaag acattattgt cacaattcat tccgataatt
     3541 cggtttctgt gcaagatgac ggtcgtggaa ttccggtggg gattcacccg gaagaaggcg
     3601 tttcggcagc agaagtcatt atgactgttc ttcacgcagg cggtaaattt gacgataact
     3661 cctataaggt ttccggcggt ttgcacggtg tgggcgtatc ggtggtgaat gcactttcct
     3721 ctaaattaca actcactatt cgccgtgaag gacacgttca cgagcaattc tatagcttag
     3781 gtgagcctga tgcaccttta gcgattatcg gcaataccga aaaaacgggg acgtcggttc
     3841 gtttctggcc aagtttggat attttcaaaa ataaaaccga atttgaatat aaaattctgt
     3901 ctaaacgctt gcgtgaacta tcatttttga attcaggcgt ttcgattaaa ttaattgatg
     3961 aacgagacgg caaagaagag cattttaaat atgagggcgg tattaaagcc tatgttgagt
     4021 atttaaacga aggcaaaact catattcaca atacgccatt ctatttgacc actgagaaag
     4081 acggcattgg cgtggaaatt tccctacagt ggaatgacag ttacaacgaa aatgtgtact
     4141 gctttaccaa taatattcca cagcgtgatg gcggtacgca cttagccggt ttccgtgggg
     4201 cattaactcg tgcgttgaaa aactatatgg ataacagcgg ggtattgaaa aaagccgatg
     4261 cgaacattga tgcctcaggt gatgatgccc gtgaaggttt agtagcggtg atttcggtga
     4321 aagtgccgga tccgaaattc tcctcacaaa ccaaagataa attggtgtcg tcagaagtgc
     4381 gtggagcagt ggaaagctca atgaatgagg ctttatccga ctatttagcc gaaaatccgg
     4441 acgatgcaaa aaatatcgtt accaaaatta ttgatgcagc ccgtgcaaga gaagcagctc
     4501 gtaaagcccg tgaaatgacc cgccgtaaag gggcgttaga tttaggcggc ttaccgggta
     4561 aattagctga ttgtcaggaa aaagatccgg cgttatcgga gctttacttg gtggagggtg
     4621 actctgccgg tggctcggca aaacaagggc gtgaccgtaa aaaccaagcg attttgccgt
     4681 taaaagggaa aattctgaac gtggaaaaag cccgctttga taaaatgctt tcttcacaag
     4741 aagtagcaac cttgattacc gctttaggca caggcatcgg gcgtgatgat tataatttgg
     4801 aaaaattacg ttaccacaaa atcattatta tgaccgatgc ggacgtggat ggtgcacata
     4861 ttcgtacgct tttattaact ttcttctacc gtcaaatgcc ggagctgatt gaaaacggct
     4921 atatttatat tgcacagcca ccgctttata aagtgaaaaa aggcaagcaa gagcgttata
     4981 ttcaagataa cgatgaaatg tcgcaatatg aaattgatat tgcattagaa ggtgcaggct
     5041 tatatgtgag tgaagatgct ccagcgttaa gtggcgtagc gttagagaac ttaattgccc
     5101 aatataacgg cgtacaaaaa ttaattgaac gtttaagccg tcgttaccca acattattac
     5161 ttaacgaatt aatttattca aaaccgcttt cggtggaatt tgcaaaaaat caagcaaata
     5221 tgaccgcttg gagcgagcaa tttgtcgcta cattgatggc aaaagaggtg ggcggcagtt
     5281 tctaccgtat taataccttg ttcaatgaag aacgccaaat ttatgagccg gaaattattg
     5341 tgactacaca cggtatggac agtacctatc gtttagatta caactttatc aacggtaatg
     5401 aatacgctcg cattgtggca ttaggcaacg agctgaacga tttactatct gattcagcct
     5461 atgtggtgcg tggtgaacgt cgccaagaaa tcagcagttt tgctgaagcc ttagattggt
     5521 tggtgaaaga atctcgtaaa ggcttaacta ttcaacgtta taaagggtta ggtgagatga
     5581 atccggaaca attatgggaa accacgatgg atccggtggc tcgtaaaatg ctacaggtca
     5641 atattaccga tgcgattgcg gcagataaac tcttcagtac gctgatgggc gatgaagttg
     5701 aaccacgccg agatttcatt gaaactaacg ctttgtatgc tcagttagat atttagttaa
     5761 aaaatccgca tttgacatgc ggatttttta ttctcttaaa ctagcatttt aagcattcgc
     5821 taaaatcacc gcccgtttcg gagcagggta gccttcaatg gttttgctat gatcgtttgg
     5881 atctaaaaaa tccactaaac tttcattttc caaccaatcg gtttttcgct gctcttctag
     5941 tgtagtgatt gcctcatcaa cacaacgcac atttttaaag ccgacttttt ccagccaatt
     6001 aatgagtgca gcaacagaag gaataaaata gatatttttc attttcgcat agcgatcagc
     6061 cggcactaaa acatcattaa tatcgccatc aatcaccagc gtttctaaca ccaattcacc
     6121 gcctctgact aattgggctt tgagttgaga aagatgatca agcggtgatt tgcgatgata
     6181 aagcaccccc attgaaaaca cggtatcaaa agcagcaagc ggttgcattt gctcaatacc
     6241 aagtggaatc agattagccc gtctatcatt ccctaagagt ttccgcactg cctcaaattg
     6301 gcacaggaac agctcggtcg ggtcaatacc aactaccatt tttgcccctt cgcctaccat
     6361 tcgccacata tgataaccgc taccgcagcc gacatctaaa atggtgcggt cttttaacgg
     6421 tgcaagatgc ggaagcacac gatcccattt aaaatcggaa cgccattcgg tatcaatatg
     6481 aatcccgtgt agatgataag ggcctttacg ccacggcatt agttgcttta aatggtgggt
     6541 aatttgcttg acttccccct cagataaagg cttgcttgaa atagactcaa ccttgtcttt
     6601 tagattgata caagcggtcg aatttggtaa aaaatctgca acttttgccc acttggcata
     6661 gtcagcgtgg gtggtctttt cccattgttt gagttgtaag ggtaaggttt ctaaccaagc
     6721 agaaaggtcg gttgtggcaa tttgttgata aaaaggacga aagtcaatca ttttgaaatt
     6781 tatgtctagg ggagagacct atgccctccc gaaaggtagt aaatagaaag gacaggcaca
     6841 gaacctaccc ctacgaaaaa tataaaatta tctcgcaatc ggatttactt tcgctttttg
     6901 cactttgcga taagcgttca gtaatttctg atgtgcagtc atattttcaa gcgattcgtc
     6961 cgatgcagtt aaaccgtgga acgggttacc gccttggatt gcaccccaag cagcttcaac
     7021 cgcttgttta ccgtacattt tctcaaacac catacgatat tgttccgaat cacgctcttc
     7081 atctaagaac aactcaatcg attggattaa gcagcggtaa taattgttac gttctgctga
     7141 gaatacgctt gcattcatat tcgctgtcca gtttgcccag tctgaggctt gctctaagtt
     7201 acctaaagct aaatgcagca tcgatttaag ctcaccgata cgcaatgttt gcattgcaga
     7261 gcctttctct gccaccacgc caataaattc acgcacacgg gttaaatcat caatgctttg
     7321 ctcatctaat tcatcaagca gttcttggta agtttcagca tcgtgatgga aatgtggcaa
     7381 atctaacaag atttcacgcc aatccatacc catattgtta ttggcataga ccaaatcatc
     7441 gcttggatag atattcgaca tacccggtgc aagaatacgg caagcgtaca cacctaaatg
     7501 ctcataatcc ataatataca caggctgatt atgcttgttg aaaatcgcca tcatattatt
     7561 aaattcttgc tccgttgtgc cggagaagtc ccaatgcacg aacggataat ccgcatcacg
     7621 tttgaaaaga tcccacgaaa ttagaccgct tgaatcaata aagtgtgtct caaggttcgc
     7681 atgatctgct acatcttcat tattaaatga aggtggggca aacacatcta aatcctttaa
     7741 gctacggcct tgtaataact cggttacggt acgttcaaac gccacttgga aattcgggtg
     7801 tgcaccaaaa gaggcaaaac aagtaccgtt atttgggttt aacaagatca cacaaataac
     7861 tggaaattct ccgcctaatg aagcgtcata gcataaaatc gggaagtctt cttgctctag
     7921 tttctcgata gaggctttga ttgtcggata accgtcaatc acactttgcg gaatttccgg
     7981 caagctgatt gcctcagtaa taatacggtt tttgacaaaa cgctcgaaca cttcggataa
     8041 gccctgcact cgagcttcat tttttgtgtt gcctgccgac ataccgtttg aaacaaacag
     8101 gttgccgata atgctttgcg gaatgtaaac cgtttcattg tcagattggc gaacgtaagg
     8161 tagggtaaca attccacgat cataatttcc tgattgtaaa tcaaccaata attccggcgt
     8221 gatttcacca ttcggatcaa aatattccca taaaaactcg tccatcatct ccattggtgg
     8281 aatggcttca tcatcaatcg gaaaccattt ttcggttgga taatgcacaa attcactatt
     8341 agcaatctct tgacctaaat aaaaatccgc ccagaaatag ttggtagata aacgctcaaa
     8401 atactcacct aatgcagagg caagagcggc ttttttgctt gctcccttac cgttagaaaa
     8461 acattgcgga cagtctgcat cacgaatatg caccgaccac acattcggaa caggatttaa
     8521 ccaagaggct tcttcaatat taaaacctaa ggtttttaat ttatgctgaa aggtcgcaat
     8581 gctgtcttca agtgcagcat ctttaccggt aataaaagtt tgttctgaca tgataatacc
     8641 tttaacttgt cgtaaaaatg gcaacattct agcaaaaatc cccatagata agtaaatttt
     8701 ttgtgaaatt tctgctgaaa gaacagattt caaaacttag aaaaaatgat tacaagcggt
     8761 caaattttac ttgaattttg caagtgaaat ttgtgtttga tttagattaa gaaaatatta
     8821 tctaggatat atacagaata aaaggttaga ggtagtattg cttgtgttag gaaggaaata
     8881 ttgaaggtat aaaaatggaa gaacatacta ttcagtcttt ttatgcccat tcggggaagc
     8941 tttcagatca ttcagattgg caaactttac tcagccacgc caataatgtt ggcttgcttg
     9001 ccgccgaatt tgctgcgccg tttgcttcac aagaaattgc tcgctgcacg gggctattgc
     9061 acgatttagg caaatatagt gaacgttacc aaaagcgttt acatggcgga gaacgggtaa
     9121 atcactctac tgctggtgca aaaattgcag tggaacgttg ggggcctttg ggcaaaatga
     9181 tggcgttttg tatcgcaggc caccacgctg ggttagcaaa tggttctgga gaagggaaaa
     9241 atcgttctac acttacacaa cgtttgcaag agcaatttgg ctatggtcat aaagatctac
     9301 cggtacttga cgctatttgg cagcaagaac ttaatttgcc tgaaaaattg cccttaccgc
     9361 cgttaaagcc ttctaaaaac gaacctttct tttcttacgc cttttttatc cgaatgctct
     9421 attcttgcct tgtcgatgcc gactttcttg atacagaagc tttttatgcc aatctcgaaa
     9481 aaagaccgct tgaacgagga aattacccca atttaaccgc actccatcag caatttaatc
     9541 aatttattgc acagtttagg gagcgaattg ccactcaaac gcctaatacg caggaagcac
     9601 aacgtaaagc ggaagtaaac cgcttgcgga gtgaaatttt ggattatgcc gtatctcaag
     9661 caaaacagga aacaggtctg ttttctctga ctgtgccaac gggcggtggt aaaaccttta
     9721 cttcaatggc gtttgccctt gagcatgcta aacagtatgg tttatgccgc attatttatg
     9781 ttattccgtt taccagcatt attgaacaaa atgctgcgga atttcgtaaa gcttttggcg
     9841 aattaggaac agaggcggta ttggaacatc acagcacttt tgatcacgat agcctacctg
     9901 ataaatcaag ccgagataag ctgaaattgg catcagaaaa ttgggatact cctgttgtgg
     9961 ttacaactgc agtgcaattc tttgaaagtt tgtttgccga ccgttcttca cgctgtcgca
    10021 aattgcataa tatcgtcggt agcgtgatta ttttggacga agcccaaatg ctaccgttga
    10081 atttattacg cccaattatg gctgcgattg atgaattagc tcgcaattat caatgttcgg
    10141 tagtgctttg cacagcgaca caacccgcta ttcatcaagc gaacggtttt tataaaggat
    10201 ttgaaaatgt gcgagaaatt gcccctaatc caaccgcact ttttgaaaaa ttgaaacgta
    10261 ctacggtaaa gcatatcggt attcaaacag atgtggagtt gcaaagcaaa ctcgcagata
    10321 acccacaaat gctgataatc gtgaataacc gccgtcacgc ccgagcgtta tatgattcag
    10381 cgaaacagtt agagggagct tatcacctca ccacgctaat gtgtgctaaa caccgctcac
    10441 aaacgctgac tgaaattcgt cttcgcctaa aacaaaacct accttgccga gtgattgcca
    10501 cttctttaat tgaagccggt gttgatgtcg atttcccact ggttatgcga gctgaagcag
    10561 gactagattc agtggctcaa gcagcagggc gttgcaaccg agaggggaaa cgtttatctg
    10621 tagaaagcaa tgtttgggtt ttccaacctg aagaacagtg gaaagcacca ccagagctag
    10681 gcttactttc tggctgtatg cgttcaacgg ttcaggttca cgcagatgat ctacttaatc
    10741 cgaaagcaat caatcattat ttccaagcgg tttatgaggc taaaggaaaa gagctggata
    10801 agccaaatat tttaaaggcg tgtcacgacg ctgggcaaag ccttaatttc ccattccaaa
    10861 aaatagctga agatttccga atgatcacaa gccatttaat tccggtgatt atccctttcg
    10921 accaagaagc cgaaaacctt attgaccgtt tacgctatgc ggatcaagta ggcggtattt
    10981 taagaaaact ccagccttac actgtgcaag taccggaaaa agcattagcc gaactctata
    11041 acgctggcag agttgaaacc attaatgaaa ccaacttcgg caaacagttt tactgcttaa
    11101 ttggaatgga tttgtatgat gaagtggcgg ggttgagttg ggagaatgtg gattttcttg
    11161 agtcggaga
//
LOCUS       DANLXD010000089        11121 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.089, whole genome shotgun sequence.
ACCESSION   DANLXD010000089 DANLXD010000000
VERSION     DANLXD010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11121)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11121)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11121
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.089"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..1212
                     /locus_tag="PXD18_001966"
     CDS             <1..1212
                     /locus_tag="PXD18_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL6302362.1"
                     /translation="GGITLAENLPNSASCNRFAKKDILFSNIRTYFKKVWLAEFSGGC
                     SPDVLVMRSKNTDILLNEYLFLLIRSDDFINFTVISANGAKMPRGDKNAMKGFIFNIP
                     SIEYQKKCIANYFAFDQKIQLNTQTNQTLEAIAQAIFKSWFVDFDPVRAKAAALSEGK
                     SEHEANLAAMSVICGKDTSELNDTEYKALWQIAEAFPSEFGDEGLPIGWKFNQADNLF
                     DVGIGKTPPRKESEWFSDNANDTEWISIKDMGNQGLFITESSEYLKAEAVDTFNIKRI
                     PENTVILSFKLTVGRVSITTKETTTNEAIAHFKIPSSSNLSSEFLYCYLKNFDFNNLG
                     STSSIATAVNSKMIKEMEILEPSVLVINHFNEYIEGIFNKIKENIIQNNNLSKIRDKL
                     LPKLLSGEMEL"
     gene            1212..4370
                     /locus_tag="PXD18_001967"
     CDS             1212..4370
                     /locus_tag="PXD18_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HDL6302363.1"
                     /translation="MITINENTIEQSAIATLQSLGWDYTYGKKILAGLEHEWRERTAE
                     VILKPLLAQAIAKFNPNLPACEVENVVAQVCRADSGDLAERNRQAYDWLRNGVKITYQ
                     LYGEQVSDVVQLIDFQRPENNDFRIVNQLDISGKKGKRIPDLIGFVNGLPLVVFELKN
                     PLKENADIGKAFAQLQTYKDEISDLFVFNQALVISDGIVARIGSLTADFDRFTPWRVV
                     DEKNQSKRIVFEDELTALLQGVMTPKNLLDYVQNFVVFERDGKNRLIKKIGAYHQFYG
                     VNEAVDCTLLAATGNRKIGVFWHTQGSGKSLSMLFYAGKVLSQSSLKNPTLVLVTDRN
                     DLDGQLYATFCGGEALLKQTPIQADGRDELRSALASRSAGGVIFTTIQKFGLMEGELA
                     HPVLNERENIIVITDEAHRSQYGFSQKINHKGEYREGYAKHLRSALPNASFIGFTGTP
                     IELDDKDTQEVFGKYVSIYDFEDAVEDGATVPIIYEPRQISLGESGEFSKVMEEAQQL
                     IDDDENSYNFRLREKLHSVDSRLQKMAEDIIAHYDERTKQQDGKAMVVVMSRAICVKL
                     YEKITALRPEWHSNDVLQGSIKIVMTSNASDPAEWQKHNQDKKTLEKRFKDPDDPLNI
                     VIVRDMWLTGFDAPCCNTMYIDKPMSGHNLMQAIARVNRVFRNKSRENGGLIVDYVGL
                     TDELEKAMKQYTNAGGKEKPVRDISAVLEKMVEHITVIRGQFATPIDGQAVDIAKMLQ
                     ISEPPKLLNAILTSANHILALDRIQPPDNTAKDKTPRKNAFLQSVRLAKKGYALCGAL
                     KAVEPYKQELAFYDAVRATIIKNSTAPRNSSSENDRLLQLTALMNRAVQSDGVVDLFD
                     LLKKDRPNINLLSDEFLETVKNSPTKDLWLSAMERYLASQLREQSGANLATKKAFEQK
                     LKEAMNQYHNHNLSVLEILEELIALAKEFEARQKRGEALGLSPAEMAFYDALARNESA
                     VREMGDEVLMKLAKDITDKLRKSVTVDWQYKDSVRAKMRTLIRIALRTYKYPPDLQAE
                     AIEFVLQQAEEIAGEFAITETA"
     gene            complement(4404..7295)
                     /gene="glnE"
                     /locus_tag="PXD18_001968"
     CDS             complement(4404..7295)
                     /gene="glnE"
                     /locus_tag="PXD18_001968"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HDL6302364.1"
                     /translation="MLTTLIPLSQLNLPPNLQNSEQIQPLVTAISLSNFVHQTLQKQP
                     DLLAEWLAKFPTPDDCCNYTERLAKILARVENEEMLGRVLRQFRHRELARLSFIQSNK
                     LATVELVFQHLSDLAESLILAARDWLFQRCCAEYGTPKNTLGETQELLILGMGKLGGR
                     ELNFSSDIDLIFTYPDIGETEGGRKSIENSKFFTRMGQRLIKVLDEITADGFVYRTDM
                     RLRPFGDSGALVLSFTAMEDYYQEQGRDWERYAMIKAKILGEDSQNLNHRYLKQMLRP
                     FVYRRYLDFSAIQSLREMKEKISREVVRRNLTDNIKFGAGGIREVEFIAQTFQMIRGG
                     RDKILQERSLLKVLPRLAELNLLTQTQVETLHNAYIFYRQIENVLQAIDDKQTQTLPT
                     DEASQARLVFACQSYYQQDLYSEKTHWVEHSFNDWQQFMAVLSQYQQAVRQIFNEIIG
                     EEETQANCNPVNEKLAEWKDILHYNIRLEDLSAVLKGYPKVAENDYTEIFRHFSTTFQ
                     DWVKRPIGVRGREVLRNLMPRIADSIFKGEDHLLLLPRVLNIVDKITTRTTYLELMLE
                     KEQILPQLLALCSKSVMIAEQIARYPMLLDELMSHRGLTDVQAFEKYQSALQDYLIRI
                     PEEDEEALIDGLRQFKQTQILRIAAADILGVLLVMKISDHLTYLAEAIINAVVNMAWK
                     QVSQRFGVPEHLEADEKGFAVIGYGKLGGIELGYNSDLDLVFLHNAPEDSQTVGGKKE
                     ISSHQFYLKLAQKINSIFNLNTSAGVLYEVDMRLRPSGEAGLLVSTFNAYEHYQKNEA
                     WTWESQALVRTRCVFGAENLKQAFEKIRQSTLAQPRASGQLRQEICEMRQKMYQHLSS
                     HSAEQFHIKQDQGGITDIEFIAQYLVLAHSHQHPKMAVWSDNVRIFDSAVECGILSSE
                     QSEQLQHCYTALRNKIHHLNLLRKDSVVDASEFTTERAFVREMWQRLLA"
     gene            complement(7467..7748)
                     /locus_tag="PXD18_001969"
     CDS             complement(7467..7748)
                     /locus_tag="PXD18_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HDL6302365.1"
                     /translation="MYYVIFAQDNPNMLEKRLEVRPAHLARLEKLQAEGRLLIAGPNP
                     TEDGSSVTGSTVIAEFNSLEEAQQWASQDPYVEAGVYSDVIIKPFKRVF"
     gene            complement(7750..8214)
                     /gene="yciA"
                     /locus_tag="PXD18_001970"
     CDS             complement(7750..8214)
                     /gene="yciA"
                     /locus_tag="PXD18_001970"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HDL6302366.1"
                     /translation="MKDKPYGKAPEGKLILRTLAMPSDTNANGDIFGGWIMSQMDLGG
                     AILAKELAKGRVVTVTVDKMIFHRPISVGDVVCCYGKLMHIGRSSMQVKVEVFIKQVY
                     EGNRERYLVTEALFTYVAIDKEGKPRAVPRENNPELDEALSLIDLTPEKQGE"
     gene            complement(8204..8761)
                     /locus_tag="PXD18_001971"
     CDS             complement(8204..8761)
                     /locus_tag="PXD18_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HDL6302367.1"
                     /translation="MKQLLEFIPLILFFVVYKMSGIQMASIALVIATIVQMIALKMLY
                     GKIEKQQIIMGGSVVFFGLLSAYFNEVKYLQWKVTIVYALFALVLLVSQFVFKTPLIK
                     KLLGKEIQLPEAVWNKINFGWAVFFLICMLLNIYISQYLSEEIWVDFKSFGIIGLTLV
                     ATVITGFVLYPYLKDAEKQEQKNER"
     gene            complement(8770..9579)
                     /locus_tag="PXD18_001972"
     CDS             complement(8770..9579)
                     /locus_tag="PXD18_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6302368.1"
                     /translation="MAQALLYFTTKYLQSIEGYFMSIKFVDLLQQSWNFMRNQQAFSL
                     FAIVTIVVVQLVFILVSPNSPELMAESQPQQLQIDASKMVSILLPTILLGVVNLLINV
                     LMIFNIQSINDGNYRQFFQNAGNALKHFLPVLLLQFVMVLPLSLGASFAMASPETVII
                     ALPVLVVGFYFFIKLSLVIYAYLLEKPQKSLSESIKFTLQLSRGKMLPLILFCVISYL
                     LPGMLSRLFTVFGNDFIGIFITIVLSAVINVFMAIFSFRFYQVYRQMPAVR"
     gene            9650..10087
                     /locus_tag="PXD18_001973"
     CDS             9650..10087
                     /locus_tag="PXD18_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF412 domain-containing protein"
                     /protein_id="HDL6302369.1"
                     /translation="MLSLFDAGQRYLNTLPNQKKLANFMPDYHIIRLVKFSSKVMPAF
                     ACFALVWQYCFTDPTQSILANSVLTAVFAISIPFQGLYWLGKRARSPLSLSLLEWYES
                     LRQKLISAQVKLEETQAVPSFQDFANLLKLAEETWGDEYFDEL"
     gene            complement(10372..11100)
                     /locus_tag="PXD18_001974"
     CDS             complement(10372..11100)
                     /locus_tag="PXD18_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6302370.1"
                     /translation="MKSFDKVWFSAKELEELDLPDLPKQATNITRKALKELWIKRDAV
                     GVKGGGNEYHITSLPRKAQEALGFKSGINAIKDSIVREITPEEQNKGSELSGTVLNNI
                     ISMIDSFASIKVSAGFGSFNEGVTKPDGQEPYADSLLHTLGVNAKKCAVFWASGDSMY
                     PTIDNGDQLLVDLSRNEIRGDNNIYIVQNGDSVWVKRVKLLWDGVELISDNREEYELI
                     KITADQAQNLQIIGQVVHIGHSLV"
BASE COUNT         3352 a         2321 c         2280 g         3168 t
ORIGIN      
        1 ggtggaataa cacttgctga aaaccttcca aattcagctt cttgcaatag gtttgccaaa
       61 aaagacattt tgttttccaa tataagaacc tactttaaaa aagtttggct tgctgaattt
      121 tcaggtggtt gttctcctga tgttctggta atgcgcagta aaaacacaga tattttatta
      181 aatgagtatt tatttttact tatccgttct gatgatttta ttaactttac agttatatca
      241 gcaaatggag caaaaatgcc acgaggggat aaaaatgcaa tgaaaggttt tattttcaat
      301 atcccaagta ttgaatatca aaaaaaatgt attgctaatt attttgcctt tgaccaaaaa
      361 atccaactca acacccaaac caaccaaacc ctagaagcca ttgcacaggc aatcttcaaa
      421 agctggtttg tggattttga ccctgtgcgc gccaaagccg ccgccctaag cgaaggcaaa
      481 agcgaacacg aagccaacct tgcggcaatg tcggtgattt gtggtaaaga caccagcgag
      541 ttaaacgaca ccgaatacaa agcgctttgg caaatcgccg aagccttccc aagtgagttt
      601 ggagatgaag ggttacctat tggctggaaa ttcaatcaag cagacaattt atttgatgtt
      661 ggtattggga aaaccccacc aagaaaagag agtgaatggt tttctgataa tgcaaatgat
      721 acagaatgga tttctattaa agatatggga aatcagggat tatttatcac agaaagtagc
      781 gaatatctaa aagctgaagc cgtagataca tttaatatta aaagaattcc tgaaaatact
      841 gtaattttga gttttaaatt aaccgttggt agagtttcaa ttacgacaaa agaaacaact
      901 actaacgaag ctattgctca ttttaaaatt cctagctcat caaatctaag ctcagagttt
      961 ttatactgct acttaaaaaa ttttgatttt aataatctag gaagtacatc atcaatcgca
     1021 acggcagtca attcaaaaat gataaaagag atggaaattt tagaaccatc agttctagtt
     1081 attaatcact ttaatgaata tattgaaggt atttttaata agataaaaga aaatattatt
     1141 caaaataata acttatctaa aattagagat aagttattac ctaaattatt aagtggggag
     1201 atggagttgt gatgattacc atcaacgaaa acaccattga acaatccgcc attgcaactt
     1261 tgcaaagctt gggctgggac tacacctacg gcaaaaaaat tttggcaggt ttagaacacg
     1321 aatggcggga gcgaaccgct gaggtgattt taaagccgct tttggcgcaa gcgattgcaa
     1381 aattcaaccc gaatttgccc gcttgtgagg tggaaaatgt ggtggcacag gtgtgccgtg
     1441 ccgacagtgg cgatttggcg gagcgtaatc gtcaggctta tgattggcta agaaatgggg
     1501 tcaaaatcac ttatcagttg tacggtgagc aggtgtctga tgtggtgcag ctgattgatt
     1561 ttcagcgtcc agaaaataac gattttcgca ttgtcaatca gctggatatt agcggcaaaa
     1621 aaggcaaacg cattccggat ttgattggct ttgttaatgg cttgccgctg gtggtgtttg
     1681 agctgaaaaa tccgctcaaa gaaaatgccg acattggcaa ggcgtttgcc caactgcaaa
     1741 cctataaaga tgaaatttct gatttgtttg tgtttaatca ggcactcgtg atttcagacg
     1801 gcattgtcgc ccgcatcggt tcgctgaccg ctgatttcga ccgttttacc ccttggcgtg
     1861 tggttgatga aaaaaatcag agcaaacgca ttgtgtttga agatgaactc accgccctgc
     1921 tgcaaggcgt gatgacaccc aaaaatctct tggattatgt gcagaatttt gtggtgtttg
     1981 aacgggacgg caaaaaccgc ttaattaaga aaatcggagc atatcatcag ttttatggcg
     2041 tgaatgaagc ggtggattgc accttgcttg ccgccacagg caaccgcaaa atcggcgtgt
     2101 tttggcatac gcaaggttcg ggcaaatcgc tttcgatgct gttttatgca ggtaaagtat
     2161 taagccaaag cagcctgaaa aatccaactt tggtgttggt aaccgaccgc aacgatttgg
     2221 acggtcagct ttacgccact ttttgcggtg gcgaggcact gctcaaacaa acgccaatcc
     2281 aagccgatgg gcgagacgaa ctccgctctg cccttgccag tcgttcggca ggcggtgtga
     2341 tttttaccac cattcaaaaa ttcggcttaa tggagggtga gcttgcccac cctgtattaa
     2401 acgagcggga aaacatcatt gtgattaccg atgaagcaca ccgctcacaa tatggtttta
     2461 gccaaaaaat caaccacaaa ggcgagtatc gtgagggtta tgccaagcat ttacgcagtg
     2521 cattgccgaa tgcctctttt attggcttta ctggcacacc gattgaactt gatgacaaag
     2581 acacccaaga agtcttcggt aaatatgtct cgatttatga ttttgaagat gcggtggaag
     2641 atggggcaac cgtgccgatt atttatgagc cacgccaaat cagcttaggc gaaagtggcg
     2701 agttttccaa agtgatggaa gaggcacaac aactgattga tgacgatgaa aacagctata
     2761 acttccgcct gcgtgaaaaa ctgcacagcg tggatagccg tttgcaaaaa atggcggaag
     2821 atattattgc ccattacgat gagcgtacca aacagcaaga cggcaaggcg atggttgtgg
     2881 tgatgagccg tgccatttgc gtgaaattgt acgaaaaaat caccgcactt cgtccagaat
     2941 ggcactcaaa cgatgtgctt caaggcagca ttaaaattgt gatgacaagt aatgccagcg
     3001 accctgccga gtggcaaaaa cacaatcagg ataagaaaac cttagaaaaa cgctttaaag
     3061 acccagacga tccgctcaac atcgtgattg tgcgggatat gtggctgaca ggctttgatg
     3121 cgccctgctg taacacaatg tacattgata aaccaatgag cggacacaac ctgatgcagg
     3181 caatcgctcg ggtaaatcgg gtatttcgca acaaaagccg tgaaaatggc ggcttgattg
     3241 tggattatgt gggcttgacc gatgagctgg aaaaagcgat gaagcagtac accaacgcag
     3301 gcggtaaaga aaagccggtg cgggacattt cagcggtgct ggaaaaaatg gtggaacata
     3361 tcacggtcat tcgtgggcaa tttgccacac cgattgacgg acaagcggtt gatattgcca
     3421 aaatgttgca aatcagcgaa ccgcctaaac tgctcaatgc gattttgaca tcagccaacc
     3481 atattcttgc cctagaccgc attcagccac ctgataacac tgccaaagac aaaaccccac
     3541 gcaaaaacgc ctttttgcaa tcggtacgct tggcgaaaaa aggttatgct ttgtgtgggg
     3601 cattaaaagc agttgaaccc tataaacagg aactggcgtt ttatgatgca gtgcgtgcca
     3661 ccattatcaa aaacagcacc gctcctcgca attcttcgag cgaaaatgac cgcttgttgc
     3721 agcttaccgc cttgatgaat cgtgcggtac agtcggatgg tgtggtggat ttatttgatt
     3781 tgctgaaaaa agaccgccca aacatcaacc tgctttctga tgagtttttg gaaacagtaa
     3841 aaaacagccc aaccaaagat ttgtggctat cagcaatgga gcgttatctt gcctcacaac
     3901 tgcgagagca aagcggtgcc aatcttgcca caaaaaaagc atttgaacag aaactcaaag
     3961 aggcgatgaa ccaataccac aaccacaatt taagcgtatt ggaaatttta gaagagctga
     4021 tcgccctcgc caaagagttt gaagcccgcc aaaaacgagg ggaagcgttg ggactaagcc
     4081 ctgcggaaat ggcgttttat gatgctttgg cacgtaatga aagtgcggtg cgggaaatgg
     4141 gcgatgaggt attgatgaaa cttgccaaag acattaccga taaattacgc aaatcggtca
     4201 ccgtagattg gcaatataaa gactcggttc gtgccaaaat gcgaacctta atccgcattg
     4261 ctctgcgtac ctataaatac ccgcccgatt tacaggcgga agcgattgag tttgtgttgc
     4321 aacaagcgga agagatcgcc ggagagttcg ctatcaccga aacggcgtaa tctatattag
     4381 ggcgtgcaat gtacgcccta aatttatgct aataacctct gccacatttc ccgcacaaat
     4441 gctcgctcgg tggtaaattc acttgcgtcc accacgctgt ctttgcgtaa taagtttagg
     4501 tggtggattt tgttacgcag tgcggtgtag caatgttgta gctgttcgct ttgttcggaa
     4561 cttaaaatac cgcattctac tgcgctgtcg aaaattcgga cattatccga ccatactgcc
     4621 attttcgggt gttggtggct gtgggctaat accaaatatt gggcgataaa ttcaatatcg
     4681 gtaatacctc cttgatcttg tttaatatga aattgctcgg ctgaatgcga gcttaaatgt
     4741 tggtacattt tctgtcgcat ttcgcaaatt tcttggcgta attgaccgct tgcacgaggc
     4801 tgagcaagcg tgctttggcg gattttttca aaggcttgtt tgaggttttc cgccccaaat
     4861 acacatcttg tccgcacgag ggcttggctt tcccacgtcc acgcttcatt tttttgataa
     4921 tgctcgtagg cattgaaagt gctgactaaa agcccagcct cgcctgatgg gcgaagtcgc
     4981 atatccactt catatagtac gccggcactg gtattaaggt taaaaatcga gttaattttt
     5041 tgagccaatt ttaagtaaaa ttgatggctt gaaatctctt ttttaccgcc aacagtttgg
     5101 ctatcctctg gggcattatg caagaaaacc aagtcgagat ctgaattata gcccagttca
     5161 atcccgccta gcttgccgta gccaataact gcaaaccctt tttcatcagc ctctaaatgt
     5221 tccggcacac caaagcgttg gctgacttgc ttccacgcca tatttaccac cgcattaata
     5281 atcgcttctg ctaagtaagt aagatgatcg ctgatcttca ttaccagcag cacgcctaaa
     5341 atatcagcag cggcgatgcg taaaatttgg gtttgtttga actgacgtaa gccatcaatc
     5401 agtgcttctt catcttcttc aggaatgcgg attaaataat cctgcaaggc agattgatat
     5461 ttttcaaaag cctgcacgtc ggttaagcct ctatggctca tcagctcatc aagtagcatt
     5521 ggatatcgag ctatctgttc cgcaatcata accgacttac tacacaatgc taaaagttga
     5581 ggcagaatct gctctttttc gagcattaat tccaaatagg tagttcgggt ggtgatttta
     5641 tcgacaatat tcaacacgcg aggcaataac aataaatgat cttcaccttt aaaaatgctg
     5701 tcggcaattc taggcattaa attgcgtagc acctctcgcc ctcttacccc aatcgggcgt
     5761 tttacccaat cttgaaaggt agtagaaaag tgacggaaaa tctccgtata atcattttct
     5821 gcaacctttg gataaccttt tagcactgcg gataaatctt caaggcgaat gttatagtgc
     5881 aaaatgtctt tccattcggc taatttttca ttaaccggat tgcagttggc ttgtgtttcc
     5941 tcttcaccga taatttcatt aaaaatctgg cgtactgctt gttgatattg gctcaatact
     6001 gccataaatt gttgccaatc gttaaaggaa tgctccaccc aatgcgtttt ttcgctatat
     6061 agatcttgct gataatagct ttggcaagca aatacaaggc gggcttgcga ggcttcatca
     6121 gtgggtaggg tttgagtttg tttatcgtca atcgcttgta atacattttc aatttgacgg
     6181 taaaaaatat aggcattgtg gagcgtttcc acctgcgttt gggttaataa atttaattct
     6241 gccaagcgtg gtagcacttt taacaggcta cgttcttgta aaattttatc tcgcccgcca
     6301 cggatcattt ggaaagtttg ggcgataaac tccacttccc gaatcccacc ggcaccaaat
     6361 ttaatattat cggttaaatt acggcgaacc acttcacggc tgattttttc tttcatttca
     6421 cgcaacgatt ggattgcact gaaatccaga taacggcggt aaacaaaagg gcggagcatt
     6481 tgctttaaat agcgatgatt taaattttgg ctatcctcgc ctaaaatttt tgctttaatc
     6541 atcgcataac gttcccaatc acgcccttgc tcttggtaat aatcttccat tgcagtaaaa
     6601 ctcagcacca aggctccgct atcaccaaag gggcgaagtc gcatatcggt acgatacacg
     6661 aaaccatcag cggtgatctc atctaatact ttaattaacc gctgccccat tcgggtaaaa
     6721 aatttgctgt tttcaatcga tttgcgtcca ccttcggttt caccaatatc ggggtaggta
     6781 aaaatcaggt caatatcgga agaaaaatta agctctcgtc cgcccaattt gcccatacct
     6841 aaaatcagca gttcttgtgt ttcgccaaga gtgttctttg gcgtgccata ttcggcacag
     6901 caacgctgaa acaaccaatc tcgagcggct agaatcaggc tctcggctaa atccgacaaa
     6961 tgctgaaata ccaattctac cgtcgctaat ttatttgact gaataaagct cagacgagcc
     7021 aattcacggt ggcgaaattg ccgcaaaacc ctccccaaca tttcttcatt ttccactctt
     7081 gctaatattt ttgctaaacg ctcagtataa ttgcagcaat catcaggcgt aggaaacttg
     7141 gcaagccatt ctgccagtaa atccggctgt ttttgcaagg tttgatgcac gaaattggaa
     7201 agcgaaatcg ccgtcacaag cggttgaatt tgctcagaat tttgcaaatt gggcggtaaa
     7261 ttgagttggg ataagggaat tagggtggta agcataaatt taggctcaaa attgaaaata
     7321 gatagaattt tacgctcgat caattcccct ctttagcaaa gagggcttag gggagatttg
     7381 gcagaggtaa ttttactctc atacgaaaca ttaatatcgt aatcaaatct cccccagccc
     7441 ctcttttcta aagaggggag aaaaaattaa aacactcttt taaacggttt aataatcaca
     7501 tcgctataca caccggcttc cacataagga tcttggcttg cccattgttg agcttcttca
     7561 agtgagttga actctgcaat tacagttgaa ccggttacgc ttgagccgtc ttcagtcggg
     7621 ttaggccctg cgattaataa tcgaccttct gcctgtaatt tttccaaacg agccaaatga
     7681 gccgggcgaa cttctaaacg tttttccaac atattgggat tatcttgggc aaagataaca
     7741 taatacatac tattctcctt gtttttcagg ggttaaatca attagcgata atgcttcgtc
     7801 taattcgggg ttattttctc tcggcacagc acgcggtttg ccttctttat caatcgctac
     7861 ataggtaaat aaggcttcgg ttacgagata acgttcgcga ttgccctcat aaacttgttt
     7921 gataaagacc tcgactttca cttgcatcga agaacgccct atgtgcatta acttgccgta
     7981 gcagcagacc acatcaccga ctgaaatcgg gcggtggaaa atcattttat ctaccgttac
     8041 cgtaacgact ctaccttttg ccaactcttt ggctaaaatt gcaccgccta aatccatctg
     8101 cgacataatc caaccgccga aaatatcgcc attggcgtta gtatctgacg gcattgccaa
     8161 agttcttaaa atcagtttcc cttccggggc ttttccatag ggtttatctt tcattttttt
     8221 gttcctgctt ttcagcatct tttaagtaag ggtaaaggac gaaaccggta ataaccgttg
     8281 cgactaaggt taagccaata atgccaaagg atttgaaatc aacccaaatc tcttccgata
     8341 aatattgact gatataaata ttcagcagca tacaaatcag aaagaatact gcccaaccga
     8401 agtttatttt attccacact gcttcaggca actgaatttc tttgcctaat aattttttga
     8461 ttaatggtgt tttgaacaca aattggctca ctaatagcac caatgcaaac agagcgtaaa
     8521 caatggttac tttccattgt aaatatttaa cttcattaaa ataggcactc agtaagccga
     8581 aaaagaccac cgagccaccc ataataattt gctgtttttc aattttgccg tagagcattt
     8641 ttaaggcgat catttgcacg attgtagcga taaccaatgc gatagacgcc atctgaatac
     8701 cgctcatttt atacacgaca aaaaacagaa tcagcggaat aaattcaagt aactgtttca
     8761 ttgatactcc taacgcactg ccggcatttg gcggtaaact tggtaaaagc ggaagctgaa
     8821 aatcgccata aagacgttaa ttaccgcact taaaacaatg gtaatgaata tgccaataaa
     8881 gtcattacca aacactgtga acaaacgaga taacatcccc ggtaataaat aagaaatcac
     8941 acaaaataaa atcagcggta gcatttttcc acgtgataat tgaagcgtaa atttaatact
     9001 ttccgataga cttttctgcg gtttctccaa taaataagca taaatcacta acgataattt
     9061 gataaaaaaa taaaaaccga ctaccaacac cggcaatgca ataatcactg tttcaggcga
     9121 tgccattgca aaagatgcac cgagagaaag cggtaacacc atcacaaatt gtaacaacag
     9181 cacaggtagg aagtgcttta atgcgtttcc tgcattttgg aaaaattgac gataattgcc
     9241 atcgttaatc gattggatat tgaaaatcat taagacattg atcaaaagat tgacaacacc
     9301 taataaaata gttggcaata gtatagacac cattttagag gcatcaattt gaagttgttg
     9361 cggttgcgac tccgccatta gctcaggcga atttggcgac actaaaataa aaaccaactg
     9421 cacaaccaca atggtgacaa tggcaaacag tgaaaatgct tgttgattac gcataaagtt
     9481 ccaactttgc tgcaataaat cgacaaattt aattgacata aaataccctt caatagattg
     9541 taaatatttt gttgtgaagt atagcaaggc ttgagccaaa ctgcattaac ctattgtaga
     9601 ttttaatcag ttagctaaaa taaaagaaaa atttgaaaga gataatccta tgttaagctt
     9661 atttgatgca ggacagcgtt acctcaacac tctgccgaat cagaaaaaat tagccaattt
     9721 tatgccagat taccacatta ttcgcttggt aaaattttcc tctaaagtaa tgcctgcttt
     9781 tgcttgcttt gcattagttt ggcaatattg ctttaccgat ccgacccaat ctattttagc
     9841 caattcggta cttactgctg ttttcgccat ttctattccg tttcaagggt tatattggct
     9901 tggaaaacgg gcaagatcac cgttatcttt atcattattg gaatggtatg agtcgcttag
     9961 acaaaaatta atttcggcac aagtcaaatt agaagaaaca caagcggtac cttctttcca
    10021 agattttgca aatttactca agctagcaga agagacttgg ggagatgaat attttgatga
    10081 gttataaaat aaaaaaagcc ccacttaaaa taagtggggt aaaacttttg ttctaattct
    10141 ggaggtttga attactgttt tattgtgggg tactgatctt ttttgcatag agagaaagaa
    10201 aaaaatttgg gcggaaaaat aacggcgagc cccgtgaata caagggttcg ccgttattgt
    10261 ttggttggag ctatgcaaaa aacaaaatga gcaggattag aaaaaaacga gcagtttttg
    10321 cgttattttt tgcataggtt tgatcggttt taaaactatt ttaaatctgt tttaaactaa
    10381 agaatgcccg atgtgtacca cttgcccgat gatttgtagg ttttgggctt ggtctgctgt
    10441 aatctttatt aactcgtact cttctcggtt gtctgaaata agctctacac cgtcccatag
    10501 cagttttaca cgcttaaccc aaacactgtc gccgttttgt acaatgtaaa tattattgtc
    10561 gcctcgtatc tcattacgac ttaaatcaac tagtagctgg tcgccattat caatagtcgg
    10621 atacatcgag tctccacttg cccaaaaaac agcacacttc ttggcattaa caccaagcgt
    10681 atgcaacaag ctatcagcat aaggctcttg tccatcaggt tttgttacac cttcattaaa
    10741 gctcccaaag cctgcagata ctttaataga tgcaaaacta tcaatcattg agattatgtt
    10801 attcaaaacg gtgcctgata attcagatcc tttgttttgc tcttcaggtg taatctctct
    10861 tactatgcta tccttgattg catttattcc acttttaaat ccgagtgctt cttgggcttt
    10921 acgaggcaat gaagttatgt gatattcatt ccccccacct tttactccaa ctgcatcacg
    10981 ttttatccag agttctttta atgcctttct tgtaatgttt gttgcttgct ttggaaggtc
    11041 aggcaaatcc aattcttcta gttctttggc tgaaaaccaa actttatcaa atgatttcat
    11101 aattaacccc ttcttaatca a
//
LOCUS       DANLXD010000090        11082 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.090, whole genome shotgun sequence.
ACCESSION   DANLXD010000090 DANLXD010000000
VERSION     DANLXD010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11082)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11082)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11082
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.090"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(71..1360)
                     /locus_tag="PXD18_001975"
     CDS             complement(71..1360)
                     /locus_tag="PXD18_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDL6302371.1"
                     /translation="MDSIPLSSLFITLAILLVLSAFFSGSETGLMSLNRYKMRHLAEQ
                     GHKGAKLAEKLLARTDVLLSLILICNNLVNIAASAIATMIGMQLSGEAGVAIATGLLT
                     FVMLVFSEILPKTVAAIYPEKVGFFASFVLTPLKKLLSPIVFLMNLIIAGLMKLLRIQ
                     QKDKQGLSSEELRSVVLDAGKFIPAEHREMLVSILDMEKVTVDDIMVPRNDISGIDID
                     DDWKAIMRQLNHAPHARVIIYKGDMDNNIVGILRVREAFRLMLEKNEFTKEMLLRATD
                     EVYFIPEGTPLTTQLMNFKANKERIGLVVDEYGDIKGLVTLEDILEEIVGEFTTSSAP
                     TLEQEVQQQSDGTVIIEGSANLRDLNKLFDWDLPLEEARTFNGLILEHLEKIPDEGME
                     FELYNLKVMILEVSENMVKQAKVEHLSPKIEKEQDSA"
     gene            complement(1484..2281)
                     /gene="ccsA"
                     /locus_tag="PXD18_001976"
     CDS             complement(1484..2281)
                     /gene="ccsA"
                     /locus_tag="PXD18_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HDL6302372.1"
                     /translation="MLLPLLSIVAYALALLWVAPTLVNLENAATVNKKPNMMLVFGFG
                     LLATILHFSVLYNELFLIEGQNFTVTNVISLMSFIMAACVTLALLKWKTVWFPLIIVY
                     SFAICSVGVAGFVKGSFIRNVQENAGLLFHLGIALFSYALFFLALIYAFQLKWLDRKL
                     KSKTMFFCQILPPLMTVERHFFTLTLAAQAMLTLTLFSGVVYLHNFFEPEHIHKAIFS
                     FLAWLVYSIQLLGQWKLHWRGKRVLIYSISGMMLLTIGYFGSRLIVN"
     gene            2497..3021
                     /gene="yceD"
                     /locus_tag="PXD18_001977"
     CDS             2497..3021
                     /gene="yceD"
                     /locus_tag="PXD18_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005621677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA accumulation protein YceD"
                     /protein_id="HDL6302373.1"
                     /translation="MQKVKLPLTIDPYKDAQRRVDYEGYISGKLLTRLGESVCNVQSD
                     AQVTLSLYVDPQRLTVIKGTAKVDVEFDCQRCGDPFTQTLDCSFVFSPVSNMDQADIL
                     PEIYEPIEVNEFGEVNLLDMIEDEFILELPLVPMHSEEHCEVSVSEQVFGELPEELVQ
                     KPNPFAVLANLKKN"
     gene            3038..3208
                     /gene="rpmF"
                     /locus_tag="PXD18_001978"
     CDS             3038..3208
                     /gene="rpmF"
                     /locus_tag="PXD18_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006231206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HDL6302374.1"
                     /translation="MAVQQNKKSRSRRDMRRSHDALTTAAVSVDKTSGETHFRHHVTA
                     DGYYRGRKVINK"
     gene            3227..4249
                     /gene="plsX"
                     /locus_tag="PXD18_001979"
     CDS             3227..4249
                     /gene="plsX"
                     /locus_tag="PXD18_001979"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HDL6302375.1"
                     /translation="MVDITLAVDVMGGDFGPRVTIPALEKALKQNPSLSFLLFGDEHQ
                     IAPLLQKHTLLNHPKIQIHHTEQVIEADVPFTTAIRQSKNSSMRLAIEAVKEGKAQGC
                     VSGGNTGALMGLAKLLIEPLPNIERPALTSLIPTLNGKSSVMLDLGANIEVSNHQLQQ
                     FAEMGNLFAQVMLDLVYPRLSLLNIGTEENKGTAQLQAVHQLLKNRQDLNYTGFIESD
                     KLTSYLTDVIICDGYTGNIALKALEGAAKNIISLFKKEKADSNICRNTKRYLLKAMFY
                     RYYRKLQQINPDRHNGATLLGLSKVVVKSHGGANINAFYYAIDYAVQQIQGDIPNKIL
                     EGLTQK"
     gene            complement(4346..5629)
                     /gene="hisD"
                     /locus_tag="PXD18_001980"
     CDS             complement(4346..5629)
                     /gene="hisD"
                     /locus_tag="PXD18_001980"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HDL6302376.1"
                     /translation="MQTLIWNNLTETEQQQYLARPAQVVGESIKAAVNEIKANVIANG
                     DKALFELAEKFDKVKLESLVVSEQQIQQAQSRISPELKQAIQNAKANIEAFHKAQQNQ
                     EVDIETQPGVCCQVITRPINAVGLYIPGGSAPLFSTVLMLAVPAKIAGCNKIVLCSPP
                     PIADEILYTAHLCGVETIYAVGGAQAIIAMANGTQTVAKVDKIFGPGNAFVTEAKRQV
                     VQEGTAIDMPAGPSEVLVIADEFADPAFVASDLLSQAEHGADSQVILVTPSESLARAV
                     DEELEKQVAVLPRAETARKALAHSRTFIAENLQQAVEISNKYAPEHLIVQTENARSLL
                     ADLDNAGSIFLGAYSPESMGDYASGTNHVLPTYGYTKTYSSLGLADFSKRMTVQELTP
                     QGFLALAETVERMASAELLDAHRNAVSLRVAKLKG"
     gene            complement(5641..6540)
                     /gene="hisG"
                     /locus_tag="PXD18_001981"
     CDS             complement(5641..6540)
                     /gene="hisG"
                     /locus_tag="PXD18_001981"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HDL6302377.1"
                     /translation="MTTQNRLRIAMQKKGRLSQECSELLKQCGVKIIWNDQRLIAYSE
                     NMPIEILRVRDDDIPGLVFDGVVDLGIIGENVLEEVELGRLSAGENVAYKKLRQLDFG
                     GCRLSLAIDRDKNYNNIKDLEDAVIATSYPNLLKRYMKEQNVPFKSILLTGSVEVAPS
                     AGIANAICDLVSSGATLEANGLKEVEVIYRSTACLIQRQEPLSAEKQALVDKLLTRIQ
                     GVQQANESKYIMLHAPKDKLAEITALLPGVENPTILPLANDQTRVAMHVVSQENLFWE
                     TMEQLKEMGASSVLVLPIEKMLA"
     misc_feature    complement(6573..6700)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            6899..7756
                     /locus_tag="PXD18_001982"
     CDS             6899..7756
                     /locus_tag="PXD18_001982"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDL6302378.1"
                     /translation="MQISLKKIYSGKVRDLYEIDEKRMLMVATDRLSAFDVILDDPIP
                     RKGEILTQISNFWFNKLAHIMPNHFTGDSVFDVLPQEEAEAIQHRAVVCKRLIPVKIE
                     SIVRGYLTGSGLKDYQQTGTICGLTLPEGLVEASKLPQPIFTPSSKAEVGDHDINISY
                     EECERQIGQELAAKVRDAALKLYTEAANYALTKGIIICDTKFEFGLDENGELTLMDEV
                     LTPDSSRFWSVETYREGTNPPSFDKQFVRDWLENSGWNKQPPAPKIPAEVIEKTVAKY
                     QEALDLLTK"
     gene            complement(7897..9378)
                     /gene="ilvC"
                     /locus_tag="PXD18_001983"
     CDS             complement(7897..9378)
                     /gene="ilvC"
                     /locus_tag="PXD18_001983"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HDL6302379.1"
                     /translation="MANYFNTLNLRQKLDQLGRCRFMDRDEFADGCNFLKGKKIVIVG
                     CGAQGLNQGLNMRDSGLDIAYALRAEAIAEKRASFKRASENGFVVGTYEQLIPEADLV
                     INLTPDKQHSKVVADVMPLMKQGAAFGYSHGFNIVEEGEQIRPDLTVVMTAPKCPGTE
                     VREEYKRGFGVPTLIAVHPENDPKGEGLAIAKAWASATGGDRAGVLESSFVAEVKSDL
                     MGEQTILCGMLQAGSIVCYDKLVSEGKDPAYAGKLIQYGWETITEALKQGGITLMMDR
                     LSNSAKLRAFELSEQIKEELAFLFEKHMDDIISGEFSSTMMADWANGDANLLKWREET
                     GKTAFENAPQADGIKISEQEYFDNGVLMVAMVKAGVELAFDTMVSAGIYEESAYYESL
                     HELPLIANTIARKRLYEMNVVISDTAEYGNYLFSHVATPILAEKIIPTLEKGDLGEPT
                     PAVEIDNVTLRDVNDAIRNHPIELIGQELRGYMTDMKRISSQG"
     gene            9600..10835
                     /locus_tag="PXD18_001984"
     CDS             9600..10835
                     /locus_tag="PXD18_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HDL6302380.1"
                     /translation="MKINRIILQSCSECGQQVRVPLTSNGNAVCPVCHNILRKSNTWS
                     LHRSAFLALAILILLPFALTFPLMSIDLLGIKINATVWDGIWKMATEGYPYTAFMVLV
                     CAVIMPIAFVLLILTIQLQRIIRQRPRYTLIFLTKIKEWVMLDVYLVALAVAAFKIRD
                     YADLQFDINLIAFVLVTLLNTLLFIKTEPKQAWERFYPEYHALPFDHPSNPTLCPTCE
                     YCFDETILDLKGRQRCPRCESNLSISDNVKIQRVWACLIAGTIMMIPANIFPISTTEL
                     AGQVSADSLMSGVLLFMEMGSYTVAAIVFIASIAVPVSKITIIFYLLLAIHYKWKHPI
                     HWQMKLLHYVHFVGRWSMLDLFVLSLMMSLLERGQILSFSVGEAAFYFGAAVFLTMFA
                     SANLDSRMLWKIHTVQKTS"
BASE COUNT         3310 a         2470 c         2080 g         3222 t
ORIGIN      
        1 ttaaaattaa caaaaaaata acacattatt tgtacaaata atgtgttatt tactttcttt
       61 tttcttaaaa ttaggctgaa tcttgctctt tttcaatttt cggtgaaaga tgttcaactt
      121 tcgcttgttt aaccatattt tcactcactt caagaatcat cactttcaag ttgtagagtt
      181 caaattccat tccttcatca ggaatttttt ctaaatgctc taaaatcaag ccgttaaagg
      241 ttctggcttc ctcaagcggt aaatcccaat caaatagttt gttcagatca cgcaggttgg
      301 ctgagccttc aataatcacc gtaccatctg attgttgctg aacttcttgc tcaagggtcg
      361 gtgctgatga agtcgtaaat tcacccacaa tttcttctaa aatatcttca agagtgacta
      421 gccctttaat atcaccatac tcatcaacca ctaaaccaat acgctcttta ttcgctttaa
      481 agttcattaa ttgtgtagtg agtggtgtgc cttcaggaat aaaatagact tcatctgttg
      541 cacgcagtag catttctttg gtaaattcgt ttttctccaa cattaaacga aaggcttcac
      601 gcacccgcaa aatcccaaca atattgttgt ccatatcccc tttgtagata atcacccgag
      661 cgtgaggggc gtgattaagc tgacgcataa tcgctttcca gtcatcatca atatcaatgc
      721 cgctgatgtc gttgcgaggc accataatgt catcaaccgt cactttttcc atatctaaaa
      781 tagagaccaa catttcacgg tgttcggcag gaataaattt accggcatca agcactacac
      841 tacgcagctc ttcggagctt aagccttgtt tatctttttg ttgaatccgc aataatttca
      901 tcagcccggc aataatcaaa ttcattaaaa atacaatcgg gctgagtaat tttttaagcg
      961 gtgttagcac aaagctggcg aaaaaaccga ctttttcagg gtaaattgcc gctactgttt
     1021 taggtaggat ttccgaaaaa accaacatta caaaagttag caaaccggtt gcaattgcca
     1081 caccggcttc accggataac tgcataccga tcatcgttgc aatcgcagag gcggcaatgt
     1141 tgactaagtt attacaaatt aagataaggc taagtagcac atcggtgcgt gccaagagtt
     1201 tttccgccag tttcgcccct ttatgccctt gctcggcaag gtgacgcatt ttgtagcggt
     1261 ttaaagacat caagccggtt tccgagcctg aaaaaaatgc agagagtact aaaagaatag
     1321 ctaaggtaat aaataaacta ctcaggggaa tactgtccaa aattcaattc ctatgtaaat
     1381 taatcataaa aggtagcgta acactaaaag cgttgtcact acctcacttt gtcggttcag
     1441 ccgacttgca aaaaattttg cttttttgac cgcttgtaga tcattaattg acgatcaaac
     1501 gactaccgaa atagccgatg gtgagcaaca tcatacccga aatcgaataa ataagcaccc
     1561 gttttccacg ccaatgtaat ttccactgtc caagtaactg aatgctataa acaagccaag
     1621 ctaaaaagga gaaaattgct ttatgaatat gctccggctc gaaaaagtta tgcaaataaa
     1681 ccacaccgga aaataaagtg agcgtcagca tagcttgtgc agctaaggtt aaagtaaaga
     1741 aatggcgttc aaccgtcatt agcggtggta gaatctggca aaagaacatt gttttgctct
     1801 ttagttttct atccagccat ttgagttgaa aagcataaat taatgctaaa aagaagagag
     1861 cataagaaaa taatgcaatc cctaaatgga aaagcagtcc cgcattttct tgcacattac
     1921 ggataaaact accttttaca aatccagcca cccccacact acaaatggcg aaagagtaca
     1981 caataattaa aggaaaccaa accgttttcc attttaacaa cgcaagtgtg acacaagccg
     2041 ccataatgaa actcatcaaa gagattacat ttgttaccgt aaaattctgc ccttcgatta
     2101 aaaataattc attatataac acagaaaaat gcaaaatcgt ggcaagtaac ccaaacccaa
     2161 agactaacat catattaggc tttttattaa ctgttgcggc attttctaaa ttcactagag
     2221 taggggcaac ccaaagtagc gctagagcgt aagcaacaat ggataaaaga ggaagtaaca
     2281 tattgtctcg aatctcgtca aataagaata actatcagaa ttttaatcaa aagtaaccgt
     2341 tttagctagt ttttgctgtt gctagatcaa aaattatcct aaaaaatgtg cttttcgcct
     2401 taaattgaac cctacctttt ctcggtaaga ttatctcact gaaaacaata attttccttt
     2461 gactaatttg ctttctatct gtaatatgca caccctatgc aaaaggtaaa actacccctt
     2521 acgattgacc cttacaaaga tgctcagcgt cgcgttgatt atgaaggcta catttcaggt
     2581 aaacttctaa cacgcttggg tgaatcagta tgtaatgtgc aaagtgatgc acaagtcact
     2641 ctctcgttat atgtcgatcc acaacgccta actgtgatta aaggcacagc aaaagtagat
     2701 gtggaatttg attgccaacg atgtggtgac ccgtttacac aaacgctcga ctgttcattt
     2761 gttttcagtc cggtgtctaa catggatcag gcggacatct tgcccgaaat ttatgaacct
     2821 atcgaagtaa acgagttcgg tgaagtaaat ttactagata tgattgaaga tgaatttatt
     2881 cttgaattac ctctagtccc gatgcatagt gaagaacact gtgaagtgtc cgtaagtgaa
     2941 caggtatttg gcgagttgcc ggaagaactg gtacaaaaac caaacccgtt cgcagtatta
     3001 gctaatttaa agaaaaacta gatctaggag aaagcccgtg gctgttcaac aaaataagaa
     3061 atctcgttca cgtcgtgata tgcgtcgttc acacgatgca ttaacaactg cagcagtttc
     3121 agtagataaa accagtggtg aaactcactt tcgccaccac gtaactgcag acggttacta
     3181 ccgtggtcgt aaagtaatca acaagtaatt cctttcgagg tttatcttgg ttgatatcac
     3241 tcttgcagta gatgtgatgg gcggggactt tggtccccgc gttactattc ctgcactgga
     3301 aaaagcctta aaacaaaatc caagcctttc ttttttatta tttggtgatg aacaccaaat
     3361 agccccttta ttacaaaaac acacactact caaccacccc aaaatccaaa ttcatcatac
     3421 cgaacaagtg attgaagctg atgttccgtt cactactgca atccgccaaa gcaaaaacag
     3481 ctctatgcgg ttagcgattg aggcagtaaa agagggcaaa gcacaaggtt gtgttagtgg
     3541 cggtaacact ggtgcgttaa tgggattggc aaaattattg attgaaccat taccaaatat
     3601 tgaacgccct gcactcactt cgctaattcc taccctcaac ggcaaatcca gcgtaatgtt
     3661 agatttaggg gcaaatattg aagtaagcaa tcaccagcta caacaatttg cagaaatggg
     3721 aaacctgttt gctcaagtaa tgcttgattt agtttaccct cgcctgtctt tattgaatat
     3781 tggtacagaa gaaaataaag gcacggcaca acttcaggca gtgcatcaac tgctgaaaaa
     3841 cagacaagac ttaaattaca ccggctttat tgaaagcgat aaattaacca gctatctcac
     3901 tgatgtgatt atttgtgacg gctacaccgg caatatcgcg ttaaaagcgt tggaaggggc
     3961 agctaaaaat attatttctc tctttaaaaa agagaaagcc gattccaata tttgccgtaa
     4021 caccaaacga tatttactga aagcgatgtt ctaccgttac taccgcaaat tgcaacaaat
     4081 taaccctgac cgccataacg gtgcgacctt gctcggctta tctaaagtag tcgtgaaaag
     4141 ccacggcggg gcaaatatca atgcctttta ttacgctatt gattatgcgg tgcaacaaat
     4201 tcaaggcgac attccaaata aaatcctaga gggtttaacc caaaaataag cgaactcaac
     4261 tgttcgctta ttttcatttc ttgtttcact taaagataca agcggtcaaa tttgcaaaaa
     4321 aatttaccca ttcaaccgct tgtgtttagc cttttaattt tgccactcgt aaactaaccg
     4381 cattgcggtg tgcatctagc aattctgcac ttgccattcg ttccaccgtt tcggccaagg
     4441 ctagaaagcc ttgtggtgtc agctcctgca ccgtcattcg cttgctaaaa tcagctaaac
     4501 ctaagctcga ataggtttta gtgtagccgt aagtcggtaa aacgtggtta gtgccgctag
     4561 cataatcccc catactttcc ggcgaatacg cccctaagaa aatcgagccg gcattatcta
     4621 aatccgccaa caacgagcga gcattttcag tttgcacaat taaatgctcg ggtgcatatt
     4681 tattactaat ttcgaccgct tgttgcaggt tttccgcaat aaaagtgcga ctgtgagcca
     4741 atgctttacg ggcagtttcg gcacgaggta aaaccgccac ctgcttttct aattcttcat
     4801 cgactgccct tgccaagctc tcacttggtg tgactaaaat cacttgggaa tcggctccat
     4861 gttctgcttg agagagtaaa tcgctcgcca caaatgcagg gtcagcaaac tcatcggcaa
     4921 tcaccaacac ttccgacggg cctgccggca tatcaatcgc cgtgccttct tgcacaactt
     4981 ggcgtttcgc ctccgtcaca aacgcattgc ccgggccgaa aattttatcc actttcgcta
     5041 ccgtttgtgt gccatttgcc atcgcaataa tcgcttgagc ccccccaact gcgtaaatcg
     5101 tttccacccc acacaaatgg gcggtgtaga gaatttcatc ggcaatcggc ggtggtgagc
     5161 aaagcacaat cttgttacaa ccggcaattt ttgccggcac tgcaagcatt aacacggtag
     5221 agaaaagcgg ggctgaaccg cccggaatat aaagccccac cgcattaatc gggcgagtga
     5281 tgacttggca acacaccccc ggctgggttt caatatccac ctcttgattt tgctgtgcct
     5341 tgtggaaagc ctcgatattc gctttcgcat tttgaatcgc ttgcttaagc tctggtgaaa
     5401 tacggctctg tgcttgctga atctgctgtt ctgatacaac taagctctct aattttactt
     5461 tatcgaactt ttcagctaat tcaaataatg ccttatcgcc gttggcaatt acattcgctt
     5521 taatttcatt aactgccgct ttaatactct cgccaaccac ctgtgccgga cgggcaagat
     5581 attgctgctg ctcagtttct gttaaattgt tccaaattag ggtttgcata tttattcctt
     5641 ttacgccaac attttctcaa tcggtaaaac caatacggaa cttgcgccca tttcttttag
     5701 ctgctccatt gtttcccaga acaggttttc ttggctgaca acgtgcattg ccacacgggt
     5761 ttggtcgtta gctaacggta aaatagtcgg gttttccaca ccgggtaata aagcggtaat
     5821 ttccgccagt ttgtctttgg gggcgtgcag cataatatac ttagattcgt tcgcctgttg
     5881 cacaccttga atgcgggtta ataatttatc cactaacgct tgtttttccg ctgaaagtgg
     5941 ttcttggcgt tgaattaggc aagcagttga acggtaaatc acttcaacct cttttaatcc
     6001 gttcgcctct aatgttgcac ctgaagaaac caagtcacaa atcgcattcg caattccggc
     6061 acttggagca acttcaaccg aaccggtgag taaaatactt ttaaacggca cattttgctc
     6121 tttcatatac cgctttaata aattggggta agaagtggca atcacagcat cttctaaatc
     6181 tttgatattg ttataatttt tatcacgatc aatagctaac gataaacggc agccaccaaa
     6241 atctaactga cgaagttttt tataggcaac attctcacca gcacttaatc gccctaattc
     6301 cacttcctct aatacatttt caccgataat cccaagatca actacgccgt caaaaactaa
     6361 gcctggaatg tcgtcatcac gcacccgtaa aatttcaatc ggcatatttt ctgaataggc
     6421 aatcaggcgt tgatcgttcc aaatgatttt cacgccacat tgtttaagca actcactaca
     6481 ttcttggctt aagcgacctt ttttctgcat cgcaattctt aatcgatttt gtgttgtcat
     6541 tgttgtttcc ttcttatgtt ttaaattgta aaaataaaaa aacctctcga aatcacttcc
     6601 gagagggtta aatttatgct gcgtttaggc gtactcggaa gtcttatctt ccgcacatac
     6661 caaatgcccg aaagattatt caggtaaatg atggtggtga tgagtacgaa taaaagccat
     6721 tttgttgttc tccaaactaa attgctttaa aagatacgct taaattttgg caatgacaag
     6781 tgttttttgc gaaaaaattg ctatttttca tctctctaaa acaactatcg caaacgtttg
     6841 cgtaaagcgg tataatttgc ctgatttttt gcaaattcaa caaagtagga ataacactat
     6901 gcaaatcagc ctcaaaaaga tctactccgg caaagtccgt gatctctacg aaatcgatga
     6961 aaaacgtatg cttatggttg ccaccgaccg attatctgcc tttgatgtta ttttagacga
     7021 tcctattcct cgtaaaggcg aaatcctcac ccaaatctcc aacttctggt tcaacaaatt
     7081 agcccacatt atgccaaacc acttcaccgg cgacagtgtg tttgacgtgt taccgcaaga
     7141 agaggcagaa gctattcaac atcgtgcggt ggtttgcaaa cgcttaatac cggtgaaaat
     7201 tgaatcgatt gtgcggggtt atttaaccgg ctccgggctg aaagattacc aacaaaccgg
     7261 cacgatctgc ggcttaacat tgccggaagg cttggttgag gccagcaaat taccgcaacc
     7321 gatcttcaca ccgtccagca aagccgaggt gggcgatcac gatattaata tcagctacga
     7381 agagtgtgaa cgccagatcg gtcaagaact tgccgccaaa gtgcgtgatg ccgctctaaa
     7441 actctacact gaagcggcaa actatgccct gaccaaagga attattattt gcgacaccaa
     7501 attcgaattc ggcttagacg aaaacggtga actaacgcta atggacgaag tcctaacccc
     7561 ggattccagc cgtttttggt cagttgaaac ctaccgagaa ggcacaaatc caccttcatt
     7621 tgataaacaa ttcgtgcgtg actggctgga aaatagcggt tggaacaaac aacccccagc
     7681 cccgaaaata ccggcagagg taattgaaaa aaccgtagcg aaatatcaag aagcattgga
     7741 tttattaacc aaataacacc acaagcggtc aaatttacgc tattttttgc aaaacaaaaa
     7801 cctgtaagcc aacacttaca ggttttttag ttagtggtaa aaagtgcggt tattctaccg
     7861 cacttttgca aaattttgtg taaatctgac cgcttgttag ccttgcgaag aaatacgttt
     7921 catatctgtc atataaccac gtaattcttg accgattaac tcgattgggt ggttacggat
     7981 tgcgtcattc acatcacgta aggtaacgtt gtcgatttcc actgccggag ttggttcacc
     8041 taaatcgcct ttctctaacg ttgggataat tttctccgct aaaatcgggg ttgcaacgtg
     8101 agagaataag tagttaccgt attctgcggt atctgaaatt accacgttca tttcatataa
     8161 acgcttacga gcgattgtat ttgcgattaa cggtaactcg tgtagagact cgtagtaagc
     8221 cgattcttca taaataccgg ctgaaaccat tgtatcaaag gctaattcaa cccctgcttt
     8281 caccattgca accattaaca caccgttatc aaagtattct tgctcagaaa ttttaatacc
     8341 gtctgcttgt ggtgcgtttt caaaggctgt tttacctgtt tcttcacgcc attttaataa
     8401 gttggcatcg ccgtttgccc agtctgccat catcgttgat gagaactcac cactgatgat
     8461 gtcgtccata tgtttttcaa ataagaacgc taattcttct ttgatttgct cagaaagctc
     8521 gaacgcacgc aatttggcac tgtttgataa gcgatccatc attaaggtga taccgccttg
     8581 ttttaacgct tcggtaatgg tttcccaacc gtattggatc aatttacctg cgtaagccgg
     8641 atctttacct tccgacacta atttgtcgta gcacacgatt gaacctgctt gtaacatacc
     8701 gcaaagaatg gtttgttcac ccattaaatc agatttcact tctgctacga atgaagattc
     8761 taatacgccc gcacggtcac caccggtagc acttgcccac gctttcgcaa tggctaaacc
     8821 ttcgccttta gggtcatttt ccgggtgaac ggcaattaag gttggcacac cgaaaccacg
     8881 tttgtactct tcacgcactt ccgtgcccgg gcatttcgga gcggtcatca caaccgttaa
     8941 atccggacga atttgctcac cttcttccac aatgttgaaa ccgtgtgaat aaccaaatgc
     9001 cgcaccttgt ttcattaacg gcattacatc ggcaactact ttagagtgct gtttgtccgg
     9061 cgttaagtta atgactaaat ccgcttcagg aattaattgc tcgtaagtac ccaccacaaa
     9121 gccgttttca gaagcacgtt taaatgaagc acgtttttca gcaatcgctt cggcacgtaa
     9181 agcgtaagca atatctaagc ctgaatcacg catatttaaa ccttggttta aaccttgagc
     9241 accacaaccc acaatcacga tttttttgcc ttttaagaaa ttgcagccat ctgcaaattc
     9301 atcacgatcc ataaagcggc aacgacctaa ctggtctaat ttttgacgta aatttaaagt
     9361 gttgaaatag ttagccattt tttaatcctt atttgaatta atgagattga tatgatgttt
     9421 tgtttgcaca ttgttatagt ttgatttgat tataccttaa cctaacattg cgtaaattga
     9481 aaatattaat atttcatatt gcataaaatg caacttgcaa aaattttgcc aaatttaacc
     9541 acttgcaatc tctacgataa agtagaaaat aaccacctaa tttaatagaa gatcaaaaaa
     9601 tgaaaataaa cagaatcatt ttacaaagct gtagcgaatg tgggcaacaa gtgcgagtcc
     9661 cgctcacgtc aaatggcaat gccgtttgcc cggtctgcca taatatatta cgcaaaagca
     9721 atacttggag cttgcaccgt agtgcttttt tggcattagc cattttaatt ttgcttccct
     9781 tcgcacttac ttttcccttg atgagcattg acttactcgg catcaaaatt aatgctaccg
     9841 tatgggacgg tatttggaag atggcaacgg agggctaccc ttacaccgct tttatggtgc
     9901 tagtctgcgc ggtaataatg ccgattgcat ttgtattgct aattttaacc attcagctac
     9961 aacgtattat tcgccaacgc ccccgttaca cgctgatttt cttaactaaa ataaaagaat
    10021 gggtaatgct tgatgtctat ttagttgctc ttgcggttgc cgcttttaaa attcgagatt
    10081 atgccgatct acaattcgat atcaacttaa tcgcctttgt gttggtaaca ctcttaaaca
    10141 ccctactttt tattaaaacc gagccaaaac aagcatggga acgtttttac ccagaatatc
    10201 acgccttgcc gtttgatcac ccaagcaatc caacactttg cccgacctgt gaatattgct
    10261 ttgatgaaac tattttagac ttaaaaggac ggcaacgctg ccctcgttgt gaaagcaatt
    10321 tatctatttc cgacaacgta aaaatacaac gggtttgggc ttgcttaatt gcagggacta
    10381 ttatgatgat tccggcaaat attttcccga tttcgacaac tgaactggca ggtcaggttt
    10441 cggcagattc attaatgtcc ggcgtgcttc tgtttatgga aatgggtagc tacaccgtgg
    10501 cagcgattgt gtttatcgct agtattgcgg tgccggtgag caaaattacc attatttttt
    10561 atctcttgct ggcaattcat tacaagtgga aacacccgat tcattggcaa atgaaactac
    10621 tacactacgt ccattttgtc ggacgctggt caatgctgga tttattcgtg ttatcattga
    10681 tgatgtcgct actcgaacga gggcagattc tcagtttctc ggtaggggaa gccgctttct
    10741 attttggagc agccgtattc ttaacgatgt ttgcctctgc aaatttagat tccagaatgt
    10801 tgtggaagat tcatactgtc cagaaaacat cctaaataaa gattttccga taaataatac
    10861 ataacatgca aagtaagaaa agtagtacgt aacccaaaat ctcaatccct attgagtaag
    10921 aaagagccga taatgtagca ccgatagcca gaaagaaatt agcaaatata aaatagtctt
    10981 tactatattt acttgaggca attagggtat ccattgcagt actaaagaac atttccaaat
    11041 acgtgacacc cactaataca ataaataatg ttactatatt tt
//
LOCUS       DANLXD010000091        10222 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.091, whole genome shotgun sequence.
ACCESSION   DANLXD010000091 DANLXD010000000
VERSION     DANLXD010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10222
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.091"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            73..1014
                     /gene="argC"
                     /locus_tag="PXD18_001985"
     CDS             73..1014
                     /gene="argC"
                     /locus_tag="PXD18_001985"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HDL6302381.1"
                     /translation="MSKYKIFVDGAVGTTGLRIHERLSQADDIELLTLPEEQRKDLNA
                     RVAKVAEADLTFLCLPDEASKELVANAPENTRICDTSTAHRVNPNWVYGFPELSGQRE
                     KIQNAKRVAVPGCHATGYIALVRPLVEKGILPADYPLSCHSLTGYSGGGKAMIADYEN
                     ENSPNAFNAPRVYGLTLQHKHLPEMQAVTQMQNPPIFTPVVADYYSGMLVTVPLQIFA
                     LQAVKSGEEIANLLADYYQTSRLIHVHPFQSLPEDGMLAANAYAGKDSLEIFIYGNST
                     QLLLAARFDNLGKGASGAAVQCMNIMLGRDEVEGLEL"
     gene            1106..1960
                     /gene="argB"
                     /locus_tag="PXD18_001986"
     CDS             1106..1960
                     /gene="argB"
                     /locus_tag="PXD18_001986"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HDL6302382.1"
                     /translation="MQQQEINQFANLLEKSTACLVKWQGKIIVVKYGGNAMINEELKK
                     SVMADLLLLHRLGVKVVLVHGGGLEISQGVKLLGKEPQFINGLRVTDSDTINVVLQML
                     AGKVNKSLVALLKGKGIGLCGIDGAMLQCKKLEAEVDYGFVGDIVKVDPTVIEIALNA
                     GLIPVVSTVGVDENGQAYNINADTAASEIAIALQAEKLVSMTDIAGLLRDRFDESTLI
                     PEVEVSEVQSLIEQGIIAGGMIPKIACCTDFIRAGGSEANIIDGRIDHAILVEMFGGK
                     NGTRFYKK"
     gene            1973..3157
                     /locus_tag="PXD18_001987"
     CDS             1973..3157
                     /locus_tag="PXD18_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HDL6302383.1"
                     /translation="MTSSNTIKQLDKDYIAQTYGRFDLALSHGKGCEVWDFEGNKYLD
                     FTSGIGVNSLGWADEDWLQAVTTQAGKLAHTSNLFFTEPASQLAQKLVAASGLKRAFF
                     CNSGAEANEGAIKTARKYSFDKYGSGRSTVLTLVNSFHGRTISTLASTGQEVFHKHFF
                     PFTEGFEYLPVNGIEALKARLETENVCGILLEVVQGEGGVCPLEADYLHAVQSLCQEK
                     DILFMIDEVQTGIGRTGTLFAYQQFDLTPGLVTLAKGLGGGLPIGAFLLGEKVEMTLG
                     KSDHGSTFGGNPVSCAAANVVIDKINAEFLAQVQQKGQLLQQRLASLPKVKSVSGLGL
                     MLGVEFEEGILAADIVAKCINKGVLFLTAKSKLRLLPPLMISEQQIEQGIRVLEDVLK
                     DS"
     gene            3340..3771
                     /locus_tag="PXD18_001988"
     CDS             3340..3771
                     /locus_tag="PXD18_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDL6302384.1"
                     /translation="MSNQIALLLMSHGSFARAALASAELIVGQQENVAAIGVVAVDNV
                     ADIKRQMEQTIAELNTDKGLIILTDIVGGTPMNLASSQLTHPNVFACSGLNLPLLLEV
                     LMSRDGNLQEIRENLPLAYQNGFSLRTQQDFVSQEDDDDLL"
     gene            3758..4225
                     /locus_tag="PXD18_001989"
     CDS             3758..4225
                     /locus_tag="PXD18_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDL6302385.1"
                     /translation="MICFSRIDDRLIHGQVVTTWVNLHRIEQIIVLNDAVAADPTQKQ
                     ILTMAAPQGIKVVAFGIEKFGEVLQKTQITRRTMLLFTNSIDVLRTVELGVSIDKLNV
                     GGMRYQARREQLSKAVSVTPEERQAFKTLLEKGVEVTVQMVPNDEKLNLQEII"
     gene            4228..4995
                     /locus_tag="PXD18_001990"
     CDS             4228..4995
                     /locus_tag="PXD18_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDL6302386.1"
                     /translation="MLTALLVACWAGICALDDIGTQMIRRPLLIAPVVGLIMGDLETA
                     LIIGATLEVMWMGIGNVGAYSAPDMISGTAIGTALGIAAGEASTAVALAVPTSLLAQQ
                     LLILYRSGVCALNPIAERWAASGDFDKIFRIHYIPMLIAFSIRAIPTFLAVYYGADII
                     AQAVSALPAKVITGLNVAGKIIPAIGIGLLMLMMIKKAELWTFLIAGFTLAVYLKLSV
                     LPITLIALPLALIYDLAVSKKAEAAPTKTADEEDYDL"
     gene            4992..5798
                     /locus_tag="PXD18_001991"
     CDS             4992..5798
                     /locus_tag="PXD18_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HDL6302387.1"
                     /translation="MSNKITKQDLNKVFWRMQVLNVTNNFQSMQAIGFLSSFIPVLKR
                     LYKDRPQEERAEAMKRHLKFFNSHVNSDALILGIAAAVEETTKEDEKETVTAIKTGLM
                     GPLAGLGDSLLKFTWLPICGSIGAALALSGNVLGPILMFLLYNSVNIATKYYGIHLGY
                     SKGVDLIHGAGNNILQRLGNMANVVGLMVIGALIASVVKVKVVSQIAAGDNVIKFQEM
                     LDKVMPGLLSLLLTVVIYWILKKTNGKYAATMILATMGICIGLVYAGILG"
     gene            5798..6835
                     /locus_tag="PXD18_001992"
     CDS             5798..6835
                     /locus_tag="PXD18_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HDL6302388.1"
                     /translation="MDSVYDIIRLEQGRYLFRQQPAQSVQIFFLDNPDSKDSKWLAET
                     DLAEFELKLSACEARPFFLIQSANGEQIVAERTLPVAGMNNFRDMGGYVAHQGKRVKW
                     GKLYRSDHLHNLRDEGVAYLDKLGIQTVIDYRSPNEVAKYPNPPINGREQTFRLDPNA
                     HTAELAAQFSADKHDEDRNLVNKIIAQKAEGNLINRYDIVMAQYRNFVEKAECQTAFA
                     EMLRLATDPENAPLVQHCRGGKDRTGFGAMLLLGILGVSKADIIADYMLTHYNRLARN
                     EEKMAIYRTFTQDQDVLDYLLSLIDTQPEFIEQSLNTIETQYGTIEQYAQRVLGITAK
                     EIEALRANYLA"
     gene            6925..8145
                     /gene="agp"
                     /locus_tag="PXD18_001993"
                     /pseudo
     CDS             6925..8145
                     /gene="agp"
                     /locus_tag="PXD18_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005628146.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glucose-1-phosphatase/inositol
                     phosphatase"
     gene            8453..>10222
                     /locus_tag="PXD18_001994"
     CDS             8453..>10222
                     /locus_tag="PXD18_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HDL6302389.1"
                     /translation="MSQDIQADLKKILALLSRNRRFQSLFLLLLRSEQFINSDALSTE
                     LQLSVRTVKKEIKLLKEKLEPYGIQIFSRPFYGYKLLIQFEELHTQLKQYFQISQPMT
                     VNNKFESRVNAILRRLLVSQRALKVEDFQSELYLSFTSALTKEFSQVKALLGKYGLIL
                     EAKPYHGMNIVGESYRKIMLTVRLYKYFTQLEHPFGIKEFEQCFACPMTEKIRERLAK
                     TIIHFNLVFSDIYAERFIIYLRYFYNQQPELLLPKLNFNYQQTNEYQFVIKLLEQLRE
                     QDSRFEFNPEVIRFLTYIAIASTDLYRFKDCNSDNYPLLLDKAWEIHRFIFTQFSAYL
                     NLSEIHDDTCRKDLLKMLIPIAMKMMLSISDDVDLGLFNQTELHRNPILAHTVEKLVD
                     DIEKNYGYSLSIREQYFIFDIFSGMVNRIELERKPLRLAIIALNGRLSTQQLKRNIKR
                     YFSDYILKIETKVLYELAIMEDKPYDYYLCNEYGKNMAIPYKPIYFADSSLNENEYAT
                     SLNEVFYHAYQYDEVLPSIKSIEIEAQYRLNEFHLEQEYLNYEQIILENKQDKIKLFY
                     QLNASVEKFEIYYFKNKEDFTLYG"
BASE COUNT         3114 a         1900 c         2259 g         2949 t
ORIGIN      
        1 caaaaataaa cttgagttta gccttaaata gccttagact accgagcaga aaaagtcaaa
       61 gaaggatttt caatgagcaa atacaagatt tttgttgatg gggcagtagg aacaaccggg
      121 ctacgcattc acgaacgttt aagccaagcg gacgatattg aattattaac cttgcccgaa
      181 gagcagcgga aagatttgaa cgcccgtgtg gcaaaagtcg cagaggcgga tttaactttc
      241 ctctgtttgc cggatgaagc ctcaaaagaa ttagtagcaa atgcaccgga aaatacccga
      301 atttgcgata cttcaaccgc tcatcgggtc aatcctaatt gggtttatgg ttttccggaa
      361 ttgagcggac aacgtgaaaa aatccaaaat gccaagcgtg ttgcggtgcc gggttgccat
      421 gccacgggct atattgcgtt ggttcgtcca ctggtggaaa aagggattct gcccgccgat
      481 taccctttaa gttgtcattc cttaaccggc tattcaggcg gtggcaaagc gatgattgct
      541 gactatgaaa atgaaaacag cccaaatgct ttcaatgccc ctcgtgttta cggtttaact
      601 ctccaacaca aacatttgcc tgaaatgcag gcagttaccc aaatgcaaaa cccaccgatt
      661 ttcacccctg tggttgctga ttattacagc ggaatgttag tcactgtgcc attgcagatc
      721 ttcgccttac aagcggtcaa atccggcgaa gaaattgcaa atttgctcgc cgattactac
      781 caaaccagcc gactaattca cgttcaccct ttccaatctc tacccgaaga cggaatgctt
      841 gccgcgaatg cttatgcagg taaagacagc ttagagattt ttatttacgg caacagcacc
      901 caacttttac ttgctgcccg ttttgacaat ttaggcaaag gggcatcagg tgccgcagtg
      961 cagtgtatga atattatgtt gggaagagat gaggttgagg ggttagagct ttaaatataa
     1021 atgtagggac aggtcctgtg cctgtccgat aatcatcgcc catattcgga cgggcacagg
     1081 acccgtccct acaagagaaa gaaatatgca acaacaagaa atcaatcaat ttgcaaattt
     1141 attagaaaaa tccaccgctt gtttggtgaa atggcagggt aaaatcattg tggtgaaata
     1201 tggcggtaac gcaatgatta atgaggaact gaaaaaatca gtgatggcag atctgctgtt
     1261 acttcatcgt ttaggcgtaa aagtggtact ggtacacggt ggcgggctgg agatttcaca
     1321 aggcgtgaaa ttattgggta aagaaccgca atttatcaac gggttgcgtg ttaccgatag
     1381 cgatacgatt aacgtggttt tgcaaatgtt ggcaggcaaa gttaataaaa gccttgtcgc
     1441 cttattaaaa gggaaaggca ttgggctgtg tggtattgat ggggcgatgt tgcaatgcaa
     1501 aaaattagag gcagaggtgg attacggctt tgtgggcgat attgtgaaag tcgatccaac
     1561 tgtgattgaa attgctctta atgcgggctt gattccggtt gtttccacgg tgggcgttga
     1621 tgaaaacggg caggcttata acattaatgc agacaccgct gccagcgaga ttgcgattgc
     1681 gttacaagcg gaaaaattgg tctcgatgac cgatattgca ggtttattgc gagatcgctt
     1741 tgatgaaagc accttaattc cggaagtgga agtaagcgaa gtgcagtccc tgattgagca
     1801 aggcattatt gccggtggga tgatccccaa aattgcgtgc tgtaccgatt tcatcagagc
     1861 tggtggctct gaggcaaata ttattgacgg gcgaatcgac cacgccattt tggtagaaat
     1921 gttcggtggc aaaaacggca cacggtttta taaaaaataa caggaaagtg aaatgacaag
     1981 cagtaatacg attaagcaat tagataagga ttatatcgcc caaacctatg gcagatttga
     2041 ccttgcactg tcgcacggaa aaggctgtga agtgtgggat tttgagggca ataagtatct
     2101 tgattttacc agtggcattg gggtaaatag tttaggctgg gcggatgagg attggctaca
     2161 agctgttacc acacaagccg gcaaattagc tcacacctca aacctgtttt ttaccgaacc
     2221 ggcaagccaa ttagcccaaa aattagtggc tgcaagcggt ctaaaacggg catttttttg
     2281 caattcaggg gcagaggcaa atgaaggagc aattaaaacc gcccgcaaat atagtttcga
     2341 caaatacggt tccggtcgtt caacggtttt aaccctcgtg aactcttttc acggacgaac
     2401 catttcaacc ctcgcatcca ctgggcaaga ggtattccac aagcattttt tcccctttac
     2461 agagggcttt gaatatttac ctgtaaatgg cattgaggca ctgaaagctc gcttggaaac
     2521 tgagaacgtt tgcgggattt tgctggaggt ggtgcagggc gagggcggtg tttgcccatt
     2581 agaggcggat tatctgcacg ccgtgcaaag cctgtgccaa gaaaaagata ttttatttat
     2641 gattgatgag gtgcaaaccg gcattgggcg aacgggcaca ctttttgctt atcaacaatt
     2701 tgatttaact cctggtttag tcacgctcgc taaaggcttg ggcggcggct tgccgattgg
     2761 tgctttcctg ttaggcgaaa aagtggaaat gacattaggc aaaagcgacc acggctcaac
     2821 ctttggtggc aatcctgttt cctgtgctgc tgcaaatgta gtaatcgata aaataaacgc
     2881 cgaatttctc gcccaagtgc aacaaaaagg gcagttgtta cagcaacgct tagcgagctt
     2941 accaaaagtt aaatccgttt caggcttagg tttaatgctc ggcgtagaat ttgaggaagg
     3001 cattttagcc gctgatattg ttgcaaaatg tatcaacaaa ggtgtgctgt ttttaaccgc
     3061 taaaagcaag ttaaggctac tcccaccgct gatgatctct gaacaacaga tagaacaagg
     3121 aatcagagtg ttagaggatg tcttgaaaga ttcttgagtt attataaaca gtaggaatat
     3181 cttcttactg ttttttatta ctattatata gtagcctact ttaatctgtt gtcactttat
     3241 atttcttctt atgtgtacga tatatcgtgc aataacttcc cttgtttatc tgtataacat
     3301 tttatttaat agaatgactt ataaatcaag gagtgactta tgtctaatca aattgcgtta
     3361 ttgttgatga gccacggcag ttttgcgagg gcggcgttgg cgagtgccga gctgattgtc
     3421 gggcagcagg aaaatgtggc agctatcggc gtagtagcag tggataatgt agcggacatt
     3481 aaacggcaga tggagcaaac cattgctgag ttaaacaccg acaaaggctt gattattctc
     3541 accgatattg ttggtggtac gccgatgaat cttgcctctt ctcaattaac ccaccctaat
     3601 gtttttgcct gttcgggttt gaatttacct ttattgctag aagtgctgat gagccgtgac
     3661 ggcaatttgc aagaaattcg ggaaaatcta ccgcttgcat accaaaacgg atttagccta
     3721 cgcacacaac aagattttgt ttcacaggag gacgatgatg atctgcttta gccgtattga
     3781 tgaccgttta attcacggtc aagtagtcac cacttgggtt aatttacacc gtattgaaca
     3841 aattattgtg ttaaatgatg cggtggcagc ggatccaacc caaaaacaga ttttaacgat
     3901 ggcagcaccg cagggaatta aagtggtcgc gtttggcatt gaaaaatttg gtgaagtgtt
     3961 gcagaagaca caaattaccc gccgtactat gttgttgttt accaatagca ttgatgtgtt
     4021 acgcactgta gaactaggtg tatcgattga caaattgaat gtcggcggaa tgcgttatca
     4081 agctaggcgt gagcagttaa gtaaagcggt ttcagttacg ccagaagagc gtcaagcatt
     4141 taaaacctta ttggaaaagg gtgttgaagt aacggtacag atggtaccga atgatgaaaa
     4201 acttaactta caggagatta tctagctatg ctgactgcac tacttgttgc ctgctgggca
     4261 ggtatttgtg ccttagatga tattggcaca cagatgatcc gccgtccgtt gttaatcgca
     4321 ccggtggtcg gattgattat gggggatttg gaaacggcgt tgattattgg tgctacgctt
     4381 gaagtgatgt ggatggggat cggcaatgtt ggtgcatatt ctgcaccgga tatgatttcc
     4441 ggaaccgcta ttggcaccgc acttggtatt gctgctggtg aagcttctac tgcggttgca
     4501 ctcgcagtac cgacctcact cttggcacag cagttactca ttctttaccg ctccggcgta
     4561 tgtgcattga acccaattgc tgaacgctgg gcggcaagcg gtgattttga caagattttc
     4621 cgcattcact atatcccaat gttaattgcc ttttctattc gtgctattcc aacgttctta
     4681 gccgtctatt acggggcgga cattattgcc caagcggtct ctgctctgcc ggcaaaagtg
     4741 attaccggat taaatgttgc aggcaaaatt attcctgcca tcggtatcgg tttgctgatg
     4801 ttaatgatga ttaagaaagc cgaactttgg acgttcttaa ttgctggctt tacgttggcg
     4861 gtttatctca aattatcagt attgccgatt accttaattg cactaccgct tgcgttgatt
     4921 tacgacttag cagtaagcaa aaaagctgaa gctgcaccaa ccaaaaccgc agatgaagag
     4981 gattatgacc tatgagcaat aaaattacca aacaagattt aaacaaagtg ttttggcgga
     5041 tgcaggtgct gaacgtcaca aacaacttcc aatcgatgca ggcgattgga tttttaagta
     5101 gctttattcc ggtattaaaa cgactttata aagatcgtcc acaggaagaa cgagcggaag
     5161 caatgaaacg ccacttaaaa ttttttaaca gccacgttaa ttctgatgca ttgattttag
     5221 gaattgccgc tgcggtagaa gagactacca aagaggatga aaaagagaca gtaaccgcga
     5281 ttaaaaccgg tttaatgggg ccgttagcag ggctgggaga cagcttgttg aaattcacct
     5341 ggttaccgat ttgcggtagt atcggggcgg cattggcact aagtggcaat gtgttaggcc
     5401 cgattttaat gttcttgttg tataacagtg taaacattgc gacgaagtat tacggtatcc
     5461 atctaggtta cagcaaaggg gttgatttaa ttcacggtgc gggtaataac attttgcaac
     5521 gactcggcaa tatggcaaat gtggttggtt taatggtgat tggcgcatta attgcctccg
     5581 ttgtgaaagt caaagtagtt tcacaaattg ccgctggtga taatgtgatt aaattccaag
     5641 agatgttaga taaagtgatg ccgggactac tcagcttact tttaactgtc gtgatctact
     5701 ggattttgaa gaaaactaac ggcaaatatg ctgcaacgat gatccttgct acgatgggga
     5761 tctgtatcgg cttagtctat gcaggaatac tcggctaatg gacagtgtgt atgacattat
     5821 tcggttggaa cagggcagat acctgttccg ccaacagccg gctcaatcgg tacagatttt
     5881 ctttctggac aaccctgaca gtaaggatag caaatggctg gcggagactg atttggcaga
     5941 gtttgagctg aaattgagcg cttgtgaagc ccgtccgttc ttcctcattc aatcagcaaa
     6001 cggagaacag attgttgctg aacgcacctt acctgttgcc ggaatgaata attttcggga
     6061 tatggggggc tatgtcgctc atcagggcaa gcgagtgaaa tggggcaagt tataccgctc
     6121 cgatcatctg cataatttaa gagacgaagg cgtggcttat cttgataaat tgggaattca
     6181 gactgttatt gactatcgca gcccgaatga agtcgccaaa tacccaaatc ccccaattaa
     6241 tggcagagag caaacttttc ggcttgatcc gaatgcacat actgccgagc ttgctgccca
     6301 atttagtgca gacaagcacg atgaagatcg taatttggtc aataaaatca ttgctcaaaa
     6361 agctgaaggt aatcttatca atcgctacga cattgtaatg gcacaatatc gtaattttgt
     6421 cgaaaaagca gaatgccaaa ccgcctttgc tgaaatgtta aggttggcga cagaccctga
     6481 aaatgcacca ttggttcaac actgccgtgg agggaaagat cgcactggtt tcggtgcaat
     6541 gttactgctt ggtattttag gcgtgagtaa agctgatatt attgctgatt atatgcttac
     6601 tcattataac cgccttgctc gtaacgaaga gaaaatggcg atttaccgta ccttcactca
     6661 agatcaagat gtgttggact acctattgtc tttaatcgat actcaacccg aatttatcga
     6721 acaatcgctt aatactattg aaacccaata tggtactatt gagcaatatg cccaaagggt
     6781 attaggtatt actgcgaagg aaattgaagc attacgggca aattatttgg cgtagaacgg
     6841 tagggtgtaa tattgaacac actacaaatg gagaaatttc atatgcgtta ttttgcaaaa
     6901 cattggtata aaactaccgc ttgtctgaca acaattttca cagcatttcc tctttttgct
     6961 caaccaattg aaaatatacc aacttcccac tacgaattag aaaaaatcat tatatttagc
     7021 cgacacgggt tacgttcccc tcttacagaa aaaggcagtg atttagaaaa atcaacccct
     7081 tataaatggg caaattggag tgtaccgacc ggtcatttaa cccataaagg gacgctgttg
     7141 gaaacctatt ttgggcagta tcttggtcaa tggctcacac ataatgggtt attggacaag
     7201 gcaagctgtg aaagtgggaa gcagattgag gtttatgcta atagcctgca acgtacaatt
     7261 ggcactgcac aagctttggt tgccggtggg ttttcaggtt gtaatgtaca agttaaacac
     7321 caccagcaga ttggaaagat ggatccggtg tttaatccaa ttattcgctc cgatgaccag
     7381 acatttgtgc aaacagcatt aagcaaaatt gacctcaata aaacccatca gtatttagcg
     7441 ccatcctatc atttattaag cgaaataatc gattatgctc attcagaaaa atgtttgcag
     7501 gaaaaacagt gtgaattttt taatgatgtt ggtaaattaa ggattaaaaa ggataaataa
     7561 ccaggtgttt ccggtacgat gcgattaagt aaaaatattg tcgatgcctt attgctgcaa
     7621 tattatgaag gttttccttt aaaagagatt gcaaataacc agcttgatag tgatcagaaa
     7681 tggcaaacac tcaataaaat taaaaacgat taccaattta tgctacgagg agatccattt
     7741 attgctaaac atatttcatt accgctatta aaatatattc agcaagattt aaatagtgaa
     7801 aataaaataa cacttttagt cggacacgat tccaatatta tagccttact ttctgcatta
     7861 aatgttaagc cttataaatt agcacatcaa tatgaacaaa ctccaatagg agggaaagtc
     7921 tttattgaaa tctggaaaga aaaaagtagc caagcacaaa aagttaaact ggaatatgta
     7981 tatcaatcta ctgaccaaat tcgtaaagcg attccactaa gccttgataa accaccgcaa
     8041 catcacattt tgagtttgga ttattgccaa gctgaccaat atggattatg cgattatatg
     8101 gaatttaaac agttactgga aaaagtcatt gctgatacat tgtgagattt tgacaaagtg
     8161 agtgaaaaag gtagcataaa aaagtcggga cagttgccag ctgctccctg taagatgttg
     8221 tttacagcac tagtaatgct actatcccca aaaagctgct gaaaggcagc ttttttgttg
     8281 tatataaaag tacacctttc tacgcttcat tctttttctc caattaaacc taatttagga
     8341 cttctagtga taaattcggt atcatatctt aattcactac atatcgtgca agccttaaaa
     8401 ttgaaagggc tgacgaaatc ctatttaatt ctgacacaca taagggaata ttatgtcgca
     8461 agatattcaa gccgatttaa aaaagatatt ggcactatta agccgtaacc gtcgatttca
     8521 atcattattt ttattactgt taagaagtga acaatttatt aatagtgatg cactttctac
     8581 ggagttacag ctttcagtac gaacggtaaa aaaagagatt aagttattaa aagaaaaact
     8641 tgaaccttac ggcattcaga ttttttctcg accgttttat ggctataaat tattgattca
     8701 gtttgaagaa ttacacacgc aactaaaaca gtatttccaa atatcacagc cgatgacggt
     8761 aaataataaa tttgagtctc gggtaaatgc gattttacgc cgattactgg tgagccagcg
     8821 tgcattgaaa gttgaagatt ttcagagtga gctttattta agttttacca gtgccttaac
     8881 aaaagaattt agtcaagtta aagccttgtt aggaaaatat ggattgatac tcgaagcgaa
     8941 accctatcac ggaatgaaca ttgtaggtga aagttatcgt aaaataatgc tcacagtacg
     9001 attatataaa tattttaccc agcttgaaca tccatttgga attaaagaat ttgaacagtg
     9061 ttttgcttgt cctatgactg aaaaaatccg tgaaaggtta gctaagacaa ttattcattt
     9121 caatttagta ttttctgata tttatgctga gcggtttatt atttacttac gctattttta
     9181 taatcaacag cctgagttat tgttaccgaa gttaaatttt aattatcaac agacgaatga
     9241 atatcagttt gtaattaagt tactggaaca gcttcgtgaa caagacagtc gttttgagtt
     9301 taatccggaa gttattcgat ttctgaccta tattgcgata gccagtacag atctctaccg
     9361 ctttaaagat tgtaattcgg ataattaccc attgttgcta gataaggctt gggaaattca
     9421 tcgttttatt tttactcagt tttctgcata tttaaattta tcggaaattc acgatgacac
     9481 ttgccgtaaa gatttgctta aaatgctgat ccctatcgca atgaaaatga tgcttagcat
     9541 ttcagatgat gtggatttag ggctatttaa ccaaacagaa ctacatagaa atccaatttt
     9601 ggctcataca gtagaaaaat tagtggatga cattgaaaaa aactacgggt atagcctatc
     9661 tattcgagaa cagtatttta tttttgatat tttttccgga atggttaatc gaattgaatt
     9721 agaacgtaaa ccgctccgac tggcgattat tgcccttaat ggcagattaa gcacccaaca
     9781 gttaaaacgg aatattaagc ggtacttttc cgactatatt ttgaaaattg aaaccaaagt
     9841 gctatatgag cttgccataa tggaagataa accttatgac tactatctct gtaatgaata
     9901 tggaaaaaat atggctattc cctataagcc tatttatttt gctgacagta gtttaaatga
     9961 aaatgaatat gcaacatcac tcaacgaagt attttatcac gcttatcaat atgatgaggt
    10021 gttgcctagc attaaatcga ttgaaattga agcacaatat cgcctaaatg agtttcatct
    10081 tgagcaagaa tatcttaatt acgaacagat tattttagaa aataaacaag acaagattaa
    10141 actattttat caactcaatg cctcggtgga aaaatttgag atctattatt ttaaaaataa
    10201 agaagatttc actttatatg gt
//
LOCUS       DANLXD010000092         9857 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.092, whole genome shotgun sequence.
ACCESSION   DANLXD010000092 DANLXD010000000
VERSION     DANLXD010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9857
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.092"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..440
                     /locus_tag="PXD18_001995"
     CDS             <1..440
                     /locus_tag="PXD18_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302390.1"
                     /translation="TIDQLENIIQVSGESFEKITSDLAEKAKELNSEYNIKCEKLGYA
                     ITLFEKNSEIEKRYISLLSDFDMDTSIKGFEKLSLLMNGKNDNARKEAEEHFNELQNG
                     LLEAQDYKKDLDIKIRKLARELYNENIAQLEIEEIKEHLYKNW"
     gene            449..2515
                     /gene="glyS"
                     /locus_tag="PXD18_001996"
     CDS             449..2515
                     /gene="glyS"
                     /locus_tag="PXD18_001996"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HDL6302391.1"
                     /translation="MTTQNFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEK
                     VEWFAAPRRLAVKVLSLAESQPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITV
                     EQAERIATDKGEWLVHRAVIEGQPTKNLLVDIIAKSLANLPIPKTMRWGDKTEQFVRP
                     VHTVTLLFGAELIEGEILGVKSGRTIRGHRFLGEREFQIENADQYPQLLKDRGSVVAD
                     FNERKALILAKSQEKATALGGVADIEEDLLDEVTSLVEYPNVLTAKFEERFLAVPAEA
                     LVYTMKGDQKYFPIYSKDGKLLPHFIFVSNINPEDPSKIIEGNEKVVRPRLTDAEFFF
                     KTDLKQKLEDQLPRLETVLFQQQLGTLRDKTARIEALAGEIAKQIGADETKAKRAGLL
                     SKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLVAC
                     SVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLTDLVAKSA
                     QLFGDKLTNKDVVEDVVDFMLGRFRAWYESEGIAVDVIQAVLARRPTKPADFDARVRA
                     VSHFRTLDSAEALAAANKRVSNILAKADIAIGDIDVSACVEPAEKALAEAVIALKAEV
                     QPLIAQGDYTAVLDKLANLRQPVDAFFDGVMVNAEDQKLRQNRLAILSTLQGLFLQVA
                     DISLLQ"
     gene            complement(2620..3921)
                     /locus_tag="PXD18_001997"
     CDS             complement(2620..3921)
                     /locus_tag="PXD18_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine dehydratase subunit alpha family protein"
                     /protein_id="HDL6302392.1"
                     /translation="MNIHCEKLVQSILHAVNHEVVPALGCTEPISLALASAIARQYLG
                     HLPERIEAKVSPNLMKNGMGVAVPGTATVGLPMAAAIGAIGGEPDGGLEVLKNITPEQ
                     VKQAKAMLNTDKVSVSIFETEHILYSEATLFHQANRVCVRIAEHHTNVIYIEKNGQTI
                     LSKPCAVNNDNTTEIFASLSAKDIFNFSMQIELEKIRFIEQAAQLNSALSQEGLRADY
                     GLHIGRTLQKQIGLGLISDDLLNRIVIETTSASDARMGGASLPAMSNSGSGNQGITAT
                     MPIVVVARHLNVTDEQRIRALFLSHLMAIYIHSKLPKLSALCAVTTAAMGSCAGIAWL
                     LTGKFENISMAISSMIGDISGIICDGASNSCAMKVSTSVTSSYKSILMSMDNSQVTGN
                     EGIVEHDIDRSINNLCSIASRSMQYTDRQVIEIMVNKPKLK"
     gene            complement(3935..5212)
                     /locus_tag="PXD18_001998"
     CDS             complement(3935..5212)
                     /locus_tag="PXD18_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302393.1"
                     /translation="MDTQKLSPAEFKQATKFDSTDFGWIIMSIGMAIGAGIVFLPVQV
                     GLMGMWVFLLSSIIGYPAMYLFQRLFINTLAESPECKDYPTVISGYLGKNWGIFLGVL
                     YFIMLVIWMFVYSTAITNDSASYLLTFGITNTLLSDNPFYGLVLICILVALSSRGEKL
                     LFKISTFMVLTKLFVVAALGLAMIGMWQLHNIGAMPPFGKLIKDAIITLPFTLTSILF
                     LQTLSPMVISYRAKEQSREVARYKALRAMNIAFAILFITVFFYAVSFTLAMGREEALK
                     AYEQNVSALAIAAQFFPGSWATYVGVALNIFAVMTAFFGVYLGFREATQGIVMNLLLR
                     KFPAEKINPNYVQKGIMLFSILLAWSAIVLNAPVLSFTSICSPIFGLVGCLIPAYLVY
                     KVPALFKYKGLALNIIIITGILLCISPFLTFLE"
     gene            complement(5241..5909)
                     /locus_tag="PXD18_001999"
     CDS             complement(5241..5909)
                     /locus_tag="PXD18_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HDL6302394.1"
                     /translation="MPDKLEYLHDLDKEIMLSYFSLSEAIAGLLGEFCEVVIHSLNAY
                     EKSVIKIINGHHTNRKIGSPITDKGLQLLKCYQKDQSNTELVYFSRLNNGNLVKSTTH
                     IIIGHEGKPIGLFCINLNLSTPLDKTVSSFMNYDPIPPHYKSENFITHPKELIEETFL
                     KAVTHIEQHTTKHSKLYKKSIIFYLFENGIFELKEAVPIVAEKLSLTSHAIYKHLREF
                     KNNT"
     gene            6143..6433
                     /locus_tag="PXD18_002000"
     CDS             6143..6433
                     /locus_tag="PXD18_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5377 domain-containing protein"
                     /protein_id="HDL6302395.1"
                     /translation="MSVKTEVLFSNHWNVRVSDPGFEGSPSHYFETVYLTLEAFINGE
                     NVHYEFTRKVEQEVKTHRSFTDVNELFEFLGEYLSPVALGNVGVRIGQLGLA"
     gene            6500..7411
                     /gene="xerC"
                     /locus_tag="PXD18_002001"
     CDS             6500..7411
                     /gene="xerC"
                     /locus_tag="PXD18_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HDL6302396.1"
                     /translation="MTTSNPLFQQTRPYWDFLRIEKQVSPHTLSNYQRQLMAVSELFS
                     QAGIENWEEVESSSVRWMLSQSHKQGLSAKSIGLRLVALRQWFVYLIKIGRMSANPTL
                     GVKSPKVGKHLPKNIDAEQVGQLLAIESDEPSDIRDIAMMELMYSSGLRLSELQGLDL
                     GDMDLSAREVRVQGKGSKERIVPIGSQALKALNRWLEMRLQFKPQDNAVFLNKRGGRL
                     SHRSIQLAMKKWGERQGLESHLHPHKLRHSFATHMLEASGDLRAVQELLGHSSLSTTQ
                     IYTHLDFQHLAKIYDSAHPRARRKQED"
     gene            complement(7408..7779)
                     /locus_tag="PXD18_002002"
     CDS             complement(7408..7779)
                     /locus_tag="PXD18_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HDL6302397.1"
                     /translation="MKYLYIICGFICIGLGIIGAVLPGLPTTPFLLLALFCFTKGSER
                     IRQWFIQTKLYKKYLQEYDEKRAMTMKQKITILAISFPFTLFAFFALPHIGGKIALVV
                     LVIIQYWYFFCKMKTLEPENA"
     gene            complement(7935..8024)
                     /locus_tag="PXD18_002003"
     tRNA            complement(7935..8024)
                     /locus_tag="PXD18_002003"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7988..7990),aa:Ser,seq:tga)
     gene            complement(8116..9207)
                     /gene="trmA"
                     /locus_tag="PXD18_002004"
     CDS             complement(8116..9207)
                     /gene="trmA"
                     /locus_tag="PXD18_002004"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HDL6302398.1"
                     /translation="MTLPIEQYSDLLAKKTENLTALLKPFNPPAIEVFASKPSHFRMR
                     AEFRVWHEEGELYHIMFNPETKARYRVDSFPIASELINHMMTALLAEIKGNELLTRKL
                     FQIDYLSTLSGEIAVSMLYHKSLNEEWVEQANALKSRLEQQGFKVQIIGRANKQKIAL
                     DCDYVEEILPVHGKNYVYRQVENSFTQPNAEMNIKMLEWARNCTKNSEGDLLELYCGN
                     GNFSIALAENFRKVLATEISKSSVQSAQYNIEKNGIVNLQIIRMSAEEFTQAMNGVRA
                     FYRLKGIDLNAYECNTIFVDPPRAGLDQATLNMVQAYERILYISCNPETLAENLQQLS
                     QTHRIEKAALFDQFPYTHHIESGVWLIRK"
     gene            complement(9272..9604)
                     /locus_tag="PXD18_002005"
     CDS             complement(9272..9604)
                     /locus_tag="PXD18_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF413 domain-containing protein"
                     /protein_id="HDL6302399.1"
                     /translation="MADSFSVTRRFFDDKNYPRGFSRHGDYTIRESQTLEQFGQACLA
                     LESGERKPATQEEKRFVAVMKGEEVAETDIEKAWLKYRTLTSKTKRIYTLSGNAGSDA
                     GDDFSAAE"
BASE COUNT         2981 a         1895 c         2163 g         2818 t
ORIGIN      
        1 caactataga tcaacttgag aatataatac aagtatcggg cgaaagtttc gaaaaaatta
       61 caagtgactt agcagaaaaa gcaaaagaat taaattcaga atataatatt aaatgtgaaa
      121 aattgggata cgccataaca ttatttgaaa aaaactcgga aatagaaaaa cgctacatat
      181 cattattatc tgactttgat atggatacaa gtataaaagg atttgaaaaa ttgtctctac
      241 taatgaatgg caagaatgat aatgctagaa aagaagctga agaacatttt aatgaattac
      301 aaaatgggct attagaagct caagattata aaaaagattt agacatcaaa attaggaaat
      361 tagctagaga gctttataat gaaaatatag cacaattaga aatagaagaa atcaaagaac
      421 atttatataa aaattggtaa tttaaacaat gacaacacaa aacttccttg ccgagatcgg
      481 cacagaagag ctgccaccga aggcactcaa aaaattagcg accgcatttg cggagaatgt
      541 agaaaacgaa ttaaaccaag caggtctttc gtttgagaaa gtggaatggt ttgctgctcc
      601 tcgccgtttg gcggtgaagg tgttgagcct tgcggaaagc cagccgagta aagaggttga
      661 gaaacgaggg ccggcggtgt cggcagcgtt tgatgccgaa ggcaagccga ctaaggcagc
      721 ggaaggctgg gcgaagggct gcgggattac cgtagagcaa gctgagcgta ttgccaccga
      781 caaaggcgaa tggttggtgc atcgtgccgt gattgaaggt cagccgacta aaaatctgtt
      841 ggtcgatatt atcgccaaat cgctggcgaa cttgccgatt ccaaaaacga tgcgttgggg
      901 cgataaaacc gagcagttcg tccgccctgt gcataccgtg acacttttat tcggggcgga
      961 gttgatcgaa ggtgagatct taggcgtgaa aagcggccgt actattcgtg gtcaccgttt
     1021 cttaggtgaa cgtgagttcc aaattgagaa cgccgatcaa tatccgcaac tgttgaaaga
     1081 tcgtggatct gtggtagcag atttcaatga gcgtaaagcc ttaattcttg caaaatcaca
     1141 ggaaaaagca accgctttgg gtggcgttgc cgatattgaa gaagatttgc tggacgaagt
     1201 gacctcgttg gtggaatacc cgaacgtact caccgccaag tttgaagagc gtttccttgc
     1261 tgtgccggcg gaagccttag tttacaccat gaaaggcgac caaaaatact tcccgattta
     1321 ttcaaaagac ggcaaattgt taccgcactt tatttttgtg tcgaacatca atccggaaga
     1381 cccaagcaaa atcatcgagg gtaacgaaaa agtggttcgc ccacgtttga ccgatgcgga
     1441 gttcttcttc aaaaccgact taaaacagaa gttggaagac caactgccac gccttgaaac
     1501 cgtgttgttc cagcaacagc ttggcacatt gcgtgataaa accgctcgca ttgaagcgtt
     1561 ggcaggtgaa attgcgaagc aaatcggggc agatgaaacc aaagcgaaac gtgcaggtct
     1621 cctctcaaaa tgtgacctga tgaccaatat ggtgtttgaa tttactgata cccaaggcgt
     1681 gatgggtatg cactatgccc gccacgacgg tgaagatgaa gaagtggcgg tggcgttaaa
     1741 cgagcagtat atgccacgtt ttgctggcga taacttgcca aattcattgg tggcttgctc
     1801 ggtggcgttg gcggacaaat ttgacacgct aacagggatt ttcggcattg gtcaagcccc
     1861 gaaaggcagt gccgacccgt tcgccctacg ccgtgcggca cttggctcgt tgcggattat
     1921 tgtggagaaa aatttaccgc ttgatttaac cgatttagtg gcgaaatctg ctcaattatt
     1981 tggcgataaa ctcaccaaca aagacgtggt tgaggacgtg gtggacttta tgctcggccg
     2041 cttccgtgcg tggtatgaga gcgaaggcat tgcggtggac gtgatccaag ccgttctcgc
     2101 ccgccgtccg accaagcctg ccgacttcga tgcccgtgtg cgtgccgtgt ctcacttccg
     2161 cacccttgac agtgccgaag ccttagccgc agcgaataaa cgggtgagta acattcttgc
     2221 caaagccgat attgcaattg gcgacattga tgtttcagct tgcgtagagc cagcagaaaa
     2281 agcattagcc gaggcggtta ttgcgttgaa agccgaagtt caaccgctga ttgcacaggg
     2341 cgactacacc gctgtgctgg ataaattagc gaacctccgc caaccggttg atgccttctt
     2401 tgacggagta atggtaaatg cagaagacca aaaactgcgt caaaaccgcc tcgccatttt
     2461 aagcacgcta caaggcttgt tcctgcaagt ggcggatatt tcgctgttgc aataacaata
     2521 agtttgcaat aattgcaaaa ttttaatgaa aatagaccgc ttgcagtaat tgtgatctgc
     2581 aagcggtctt ttttgcttga aattttacca aaggcgggat tatttaagtt ttggtttatt
     2641 caccataatc tcgatgactt ggcggtctgt gtattgcata ctacgagagg caatgctgca
     2701 taagttatta attgaacgat caatatcgtg ttcgacaatt ccttcgttgc ctgttacttg
     2761 gctattatcc atagacatca gaatggattt atagcttgat gttacgctgg tggagacttt
     2821 catcgcacaa ctgtttgaag caccatcaca gataataccg ctaatatcgc cgatcatact
     2881 actaattgcc atactgatat tctcaaattt ccctgtgagc agccacgcta tgccggcaca
     2941 gcttcccata gccgcggttg ttacggcaca gagtgcagat aatttcggta acttgctgtg
     3001 aatataaatt gccatgaggt gtgataaaaa gagtgctcta atgcgttgct catcagtgac
     3061 atttaaatgg cgggcaacga caacaatcgg catagttgct gtaattcctt gattacctga
     3121 acccgaattg ctcatagcag gtaaacttgc accgcccatt ctagcatcag aggcagaggt
     3181 ggtttctata acaatgcgat taagcaaatc atcactgatt agacctagac caatctgttt
     3241 ttgcaatgtc cttccgatat gtagcccata atcggcacgt aatccttctt gtgagagtgc
     3301 ggaatttaat tgtgctgctt gctcaataaa gcgaattttt tccaattcga tttgcataga
     3361 aaaattaaat atatcttttg ccgaaagtga agcaaagatc tcagtagtat tatcgttatt
     3421 gacggcacaa ggtttgctta aaatagtttg cccgtttttt tcaatgtaaa tgacattggt
     3481 atggtgttca gcaatacgaa cacatactcg attcgcttgg tgaaatagtg ttgcttcaga
     3541 atatagaata tgttctgttt cgaaaataga gacagacact ttatcggtat ttaacatagc
     3601 tttagcttgc ttaacctgtt ctggcgtaat attttttaat acttctaatc caccatcagg
     3661 ctcccctccg attgctccaa tagctgccgc cataggcaat ccgacggttg cagttcccgg
     3721 tactgctact cccatcccat ttttcatcaa gttaggggaa acttttgcct caatacgttc
     3781 tggtaaatga cctaaatatt ggcgtgcaat ggcggatgca agggcgagag aaataggttc
     3841 tgtacagcct aatgcaggga caacttcatg gttgactgca tgtaaaatgg attgtactaa
     3901 tttttcgcag tgaatattca tagataaaac cttattactc taaaaatgtg aggaatggag
     3961 aaatacataa taaaatgccg gtaatgataa taatattgag tgctagccct ttatatttga
     4021 ataatgcagg cactttatag actaaatagg ccggaatcaa gcacccaact aagccaaaaa
     4081 taggactaca gattgaggta aagcttaaaa ccggtgcatt taatacaatc gcactccaag
     4141 ccagcagaat ggaaaataac ataatccctt tctgcacata attaggattg attttttcag
     4201 ccgggaattt tcttaataat aggttcatca caatgccttg agtggcttct ctaaaaccta
     4261 aatatacccc gaaaaaggct gtcataacgg caaaaatatt taatgcaaca cctacatagg
     4321 ttgcccaact accagggaaa aattgggctg caattgctaa tgcggaaaca ttttgctcgt
     4381 atgctttgag cgcttcttct ctccccattg caagtgtaaa agagacagcg taaaaaaaaa
     4441 cggtaataaa taagatagca aatgcaatat tcatcgctcg tagggcttta tagcgcgcaa
     4501 cttcacgaga ctgttcttta gcacggtaag aaattaccat tgggctgaga gtttgcaaga
     4561 agagtataga ggttagggtg aaaggaaggg taatgatggc atcttttata agtttgccga
     4621 aaggaggcat tgcaccgata ttatggagtt gccacattcc aatcattgca agccctaagg
     4681 cggcaacgac aaatagctta gttaatacca taaatgtaga tattttaaac agtagctttt
     4741 cgcctcgaga agataaggca actaatatac agattagcac taagccataa aatggattat
     4801 cagagagtag tgtattggta atgccgaagg taagaagata ggaggcactg tcgtttgtaa
     4861 ttgcggtaga ataaacaaac atccaaatca ctaacataat aaaataaagt acacctaaaa
     4921 agattcccca gtttttgccc aggtagccac taataacggt ggggtaatct ttgcattccg
     4981 gagattctgc taaagtatta atgaacagac gctgaaaaag gtacatcgcc gggtatccga
     5041 taatagaaga aagtagaaaa acccacatgc ccataagtcc tacttgtacc ggtaaaaaga
     5101 cgatgcctgc cccgatagcc ataccaatac tcataatgat ccagccgaag tcggtagaat
     5161 caaattttgt tgcttgttta aattcggcag gcgagagttt ttgagtatcc atagagtctc
     5221 cttaaatcgt aacagtataa ttaagtgtta tttttgaatt ctcttaaatg tttataaatt
     5281 gcgtggctgg ttagggagag tttttctgcc acaataggta ctgcctcttt tagctcaaag
     5341 atgccatttt caaacaaata gaagataatg gatttcttat agagttttga atgtttggta
     5401 gtgtgttgct caatgtgagt aactgctttt agaaaggttt cttcaataag ttcttttggg
     5461 tgagtaataa agttttcact tttataatga ggcggaatag gatcgtaatt cataaaagag
     5521 ctaacggttt tatctaatgg tgtcgataaa tttaaattaa tacaaaataa tccgataggt
     5581 ttgccctcat gcccgataat aatatgcgtg gtggacttaa ctaagttacc gttatttaac
     5641 cgtgaaaagt aaaccagctc agtattagat tgatcttttt ggtaacattt tagtaactgt
     5701 aatcctttat ctgtaatagg cgaacctatt tttcggttag tatgatgtcc gttaatgatt
     5761 ttaataacgg atttttcata ggcattcaat gaatgaataa ccacctcaca gaattctcct
     5821 aataaccctg ctattgcttc acttaatgag aaataagaca gcataatttc tttgtctaaa
     5881 tcatgaagat actctaattt atctggcata acttttactc caatttttgt gaattataag
     5941 aatgagtaaa ttttaaagtc aattatattt aactttatta agagttaaaa gtcagtattt
     6001 tttgaccaag atcatatttt gagggaaaga tataagagga caaaccaaat aagatttgcc
     6061 tcgattctga ctaggaaaag tggcaaattc aatctatctt gattaaaata atgtacgtac
     6121 ttataggaag aaggaaaaca caatgtcagt aaaaaccgaa gttttattta gtaatcattg
     6181 gaatgttcga gtgagtgatc cgggctttga aggctcgcca agccactatt ttgaaaccgt
     6241 atatttaacg ctggaagcct ttattaacgg cgaaaatgta cattatgaat ttactcgtaa
     6301 agtggagcaa gaagtgaaaa ctcatcgcag ttttactgat gtgaatgaat tgtttgaatt
     6361 tctcggcgaa tatttaagcc ctgttgcact tggtaatgtt ggcgtgcgta tcggtcagtt
     6421 ggggctagcc taatctcaaa gggcaaatct tttgcccttg caacattttc ctaaaaatta
     6481 accgcttgtt attacgttta tgaccacttc caaccctctt ttccaacaaa cccgccccta
     6541 ttgggatttc ttacgcattg aaaagcaagt tagcccgcat accttaagca attatcaacg
     6601 ccaattaatg gcggtgagcg agcttttttc gcaagcaggc attgaaaatt gggaagaggt
     6661 cgaaagtagc tcggtgcgtt ggatgttaag ccaaagccat aagcaagggt tgagtgcgaa
     6721 aagtatcggc ttacgcttgg tggcgttacg gcaatggttt gtctatttga ttaaaatcgg
     6781 gcgaatgtcg gcaaacccga ctttaggggt gaaatcgccg aaagtaggta agcatttgcc
     6841 gaaaaatatt gatgcggagc aggtcgggca gttgctggcg attgagagtg atgagccgag
     6901 cgatattcga gatattgcga tgatggagct gatgtatagt tccggcttgc gtttatcgga
     6961 attacaaggg ctggatttag gcgatatgga tttatcggca cgagaagtac gggtgcaagg
     7021 taagggtagc aaagagcgaa ttgtgccgat tggctcgcaa gcgttaaaag cgttaaatcg
     7081 ctggttagaa atgcgtttgc aatttaagcc gcaagataat gcggtgtttc tgaataagcg
     7141 aggtgggcgg ttatctcatc gttccattca gttggcaatg aagaaatggg gtgagcgaca
     7201 agggctggaa agccatctgc atccacataa attacgtcac tcttttgcga ctcatatgtt
     7261 agaggcaagc ggtgatttgc gagcggttca ggaattattg ggtcatagta gcctgtccac
     7321 cactcaaatt tatacgcatc tggatttcca acacttagct aaaatttatg actctgccca
     7381 cccaagagca aggcggaagc aggaagatta ggcattctcc ggttcaaggg ttttcatttt
     7441 gcagaagaaa taccaatatt gaattatcac taacactact aacgcaattt tcccaccgat
     7501 atggggcagt gcaaagaaag caaatagtgt aaacggaaac gaaatcgcta aaatcgtgat
     7561 tttttgcttc atcgtcattg cccgtttctc atcatattct tgcagatatt ttttgtataa
     7621 tttggtttga ataaaccact ggcggattct ctccgagcct ttagtaaagc agaacagagc
     7681 caaaagtaag aacggtgtgg tcggcaagcc cggtaatact gccccgatga tgcctaaacc
     7741 aatacaaata aaaccacaga taatataaag gtatttcata ataattaagt tattgataat
     7801 gaatcgcaat tatcctaaag caactttagg ctgatttcaa ccagtttata gcgatggatt
     7861 caagcggtgg ttttatctga ttttcttgca aatgaaataa aaaaacctgc tgattgctca
     7921 acaggtttaa agactggcgg aggaagtgag attcgaactc acggagggcg ttaaccctcg
     7981 ccggttttca agaccggtgc attcaaccgc tctgccattc ctccgttgaa aacgttgcaa
     8041 taatagagat tattgcgaac atcgtcaagt aataaatctt aaaagctgct tattcgttct
     8101 ttttttcagc acaatttatt ttctaattaa ccaaacgcca ctttcaatat ggtgggtgta
     8161 agggaattgg tcaaaaagag cggctttttc aatccgatgg gtttggctta attgttgtaa
     8221 attctcggca agggtttccg gattgcaaga gatatagaga atccgctcat acgcttgcac
     8281 catatttaat gtagcttgat ctaaccctgc acgaggtgga tcaacaaaaa tggtattgca
     8341 ttcgtaggcg tttaaatcaa tcccttttaa gcgataaaag gctcgcacac cgttcatcgc
     8401 ttgggtaaat tcttctgccg acattcggat aatttgtagg ttaacaatgc catttttttc
     8461 aatattgtat tgagccgatt gcactgaaga ttttgagatc tcggttgcca gcactttgcg
     8521 gaagttttcc gccaaggcaa tcgaaaaatt gccgttgccg cagtaaagct caagcaaatc
     8581 gccttcacta ttttttgtgc aatttctcgc ccattccagc attttaatat tcatttccgc
     8641 attcggctgg gtaaagctgt tttccacttg gcgatacaca taatttttgc cgtgtaccgg
     8701 tagaatttct tccacataat cgcaatccag tgcgattttt tgtttattgg cacgcccgat
     8761 aatttgcact ttgaaacctt gttgctctaa acggcttttt aaggcgtttg cctgttcaac
     8821 ccattcttca ttcaggcttt tgtggtaaag cattgagact gcaatttcac cgcttaaggt
     8881 gcttaaataa tcgatctgga acagcttgcg agtcagtagt tcattgcctt taatttccgc
     8941 caataatgcg gtcatcatat ggttaatcag ctcactggca atagggaagc tatccacacg
     9001 ataacgagct ttggtttcag ggttgaacat aatgtggtac agctcgcctt cctcgtgcca
     9061 cactcgaaat tctgcccgca tacggaaatg gcttggcttt gaggcaaata cctcaatcgc
     9121 aggcgggtta aacggcttga gtaaagcggt caaattttcg gttttttttg caagaagatc
     9181 ggaatattgt tcgataggaa gagtcatttt ttaccacaaa tagcaaatga aaaaacaaac
     9241 cacgaattac ttcgtggttt taaattagaa attattcagc agcactgaag tcatcgccgg
     9301 catcgctacc tgcattgcct gaaagggtgt agatgcgttt tgttttacta gttaatgtgc
     9361 ggtattttaa ccacgctttt tcaatgtcag tttctgctac ctcttcgcct ttcattaccg
     9421 caacgaaacg tttttcttct tgagttgccg gcttacgttc accactttct aaagccaagc
     9481 aagcttgacc gaattgttct aaagtttgtg attcacgaat ggtgtaatcg ccgtggcgag
     9541 agaaaccacg tggataattt ttatcgtcaa aaaagcggcg cgtaacgctg aaactgtctg
     9601 ccataataat gcctcgttgt ttgaaattag ggaaaataaa atcggcatac attaaacaaa
     9661 aacagcgaat aaatcaatgc cttaatgtaa aaaagcggtc aaatttggca aattttttgc
     9721 aaaaaactct ttaaggagaa atattgatcc ttttaaaata gacaatgcag tctgaggtat
     9781 attttttata tttgttaagg tatattacct aaatgtattg agttttgatt aactttaata
     9841 tttggagata tactgtg
//
LOCUS       DANLXD010000093         9849 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.093, whole genome shotgun sequence.
ACCESSION   DANLXD010000093 DANLXD010000000
VERSION     DANLXD010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9849)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9849)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9849
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.093"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(115..1830)
                     /gene="proS"
                     /locus_tag="PXD18_002006"
     CDS             complement(115..1830)
                     /gene="proS"
                     /locus_tag="PXD18_002006"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDL6302400.1"
                     /translation="MRTSQYLFSTLKEMPNDAQVVSHQLMLRAGMIRPMASGLYNWLP
                     TGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAELWVESGRWNDYGPELLRFKDRGER
                     DFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDA
                     YSFHTTQESLQETYDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGE
                     DDVVFSTESDFAANIELAEAVAVGERQAPTAEMQLVDTPNAKTINELVENHGLAIEKT
                     VKTLVVKGATEEQPLIALVIRGDHELNEIKAQKHPLVADPLEFADEAEIKAKIGAGVG
                     SLGVVNMPVPVIIDRSVALMSDFGCGANIDGKHYFNVNWERDVAVPEIADLRNVVEGD
                     PSPDGKGTLQIKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVV
                     AAAIEQHYDDRGIIWPCDEMAPFTVAIVPMNMHKSEKVQAFAEELYANLKAQGVEVIF
                     DDRKERPGVMFADMELIGVPHMVVIGEKNLENGEIEYKNRRSGEKQMIAKESLLAFLK
                     ANVKA"
     gene            complement(1994..2176)
                     /locus_tag="PXD18_002007"
     CDS             complement(1994..2176)
                     /locus_tag="PXD18_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302401.1"
                     /translation="MEQKLNNVFGGIMFKEKDYDEYLEAKVKKGLAEIEKGQIFTLEQ
                     ANAEWQEIIEQIEREN"
     gene            complement(2229..4112)
                     /gene="htpG"
                     /locus_tag="PXD18_002008"
     CDS             complement(2229..4112)
                     /gene="htpG"
                     /locus_tag="PXD18_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HDL6302402.1"
                     /translation="MANNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAA
                     DKLRFKALSEPALYEGDGELRVRVSVDETLGTITIADNGIGMTREQVIDHLGTIAKSG
                     TKEFLNALGTDQAKDSQLIGQFGVGFYSSFIVADKVTVKTRAAGVPAEQGVIWESAGE
                     GDYTVADLEKKERGTEIILHLREDEKEFLNEWRLREIIGKYSDHIGLAVEIQTNEYDD
                     EGKASGQKWEKINKAQALWTRSKNEISDEEYTEFYKHLSHDFSDPLIWSHNKVEGKQE
                     YTSLLYVPSKAPWDLFQREQKHGLKLYVQRVFIMDDAEVFMPNYLRFMRGLLDTNDLP
                     LNVSREILQENKVTQSLRSALTKRALQLLEKLAKDDAEKYAQFWQAFGVVLKEGVGED
                     FANKQQVAGLLRFASTQRDDSEQAVSFADYIARMKEGQKAIYFLTADSYQAAKNSPHL
                     ELFHKKGIEVLLLSDRIDEWLVSHLTEFDGKPLQSITKSDLDLGELADKQEEESQKAQ
                     QAEFGSFLERAKGYFGERVKNVVLTHRLTDTPAVVSTDNDEMTTQMAKLFAAMGQQAP
                     EVKYTFELNPDHPMVKKVADLADEAEFADWIELLFEQALLAERGTLENPTAFIKRVNK
                     LLG"
     gene            4276..4563
                     /locus_tag="PXD18_002009"
     CDS             4276..4563
                     /locus_tag="PXD18_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HDL6302403.1"
                     /translation="MAIIITSREFNQNASKVLKMAEKEPVFITKWGKIVNVVSSYMDY
                     QQKKPSEPSFEELFASSENEDVSDEFWQEFEQTLVEIRKSNKPRPVDFGDE"
     gene            4563..4991
                     /locus_tag="PXD18_002010"
     CDS             4563..4991
                     /locus_tag="PXD18_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HDL6302404.1"
                     /translation="MYRYLFDTNIVSELYKLRNDKMDVNVRQWLRGVNPSQTNISCIT
                     LSEIKTGILLKARKDKEQSDRLNDWFENNVLKAYQTKAFVVNNDIALLASEYHIPNKM
                     DLNDAYIAATAKYHNLILVTRNTKDFIRCDVRLFNPFETA"
     gene            4995..7076
                     /gene="recG"
                     /locus_tag="PXD18_002011"
     CDS             4995..7076
                     /gene="recG"
                     /locus_tag="PXD18_002011"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDL6302405.1"
                     /translation="MSEQLLDGVPLTALSGVGAAISEKLSRIGINNVQDLLFHLPMRY
                     EDRTRITPIADVRPESFATIEGYVQLTEVQFGKRPILSVTLSDSTSKIMLKFFNFNAG
                     MKNSLATGVRVKAFGEIKRGRFMAEIHHPEYQIIRDNQPLVLAETLTPIYSTTEGLKQ
                     ASLRKLTEQALALLEKVKVAELLPDEYNPHKYSLKEALQLLHRPPPTISAEVLEKGDH
                     PAQKRLIFEELLAHNLAMQQLRLGVKQQYAEALTYQTDIKQRFLDSLPFKPTHAQSRV
                     TADIEQDLAKPHPMMRLVQGDVGSGKTLVAALAALLAIDNGKQVALMAPTEILAEQHA
                     NNFANWLNPFGIEVGWLAGKVKGKARTAQLEAIKNGDVQMIIGTHALFQDNVEFHHLA
                     LVIIDEQHRFGVHQRLTLREKGAKENNYPHQFIMTATPIPRTLAMTVYADLDTSIIDE
                     LPPGRTPITTVVISEDRRAEIVQRVYQACKQEHRQAYWVCTLIDESEVLEAQAAAAIA
                     EDLQRALPDLRIGLVHGRLKPQEKQAIMAEFKAANLDLLVATTVIEVGVDVPNASLMI
                     IENSERLGLAQLHQLRGRVGRGATASHCVLMYKPPLGKISSKRLQVMRDSQDGFYIAE
                     KDLEIRGTGEILGTKQTGMAEFKVADLMRDRKMIPLVQRYAKQIISENQPLAEALIKR
                     WLDNKAEYTNA"
     gene            complement(7098..8030)
                     /locus_tag="PXD18_002012"
                     /pseudo
     CDS             complement(7098..8030)
                     /locus_tag="PXD18_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250489.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
     gene            complement(8083..9735)
                     /locus_tag="PXD18_002013"
     CDS             complement(8083..9735)
                     /locus_tag="PXD18_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HDL6302406.1"
                     /translation="MTIFQVAQNWLAQDPDAETRAELEQLIQAAESDEKAKAELTARF
                     DGRLQFGTAGLRGRLQAGSMGMNRVLVAQAAGGLAEFIKGYDKEPSIVIGYDGRKNSD
                     VFARDTAEIMAAAGIKTYLLPRKLPTPVLAYAIQYFDTTAGVMVTASHNPLEDNGYKV
                     YLGKANGGGQIVSPADKEIAALIDKVAACDIRDLPRSQDFTVLDDEVVNAYIEKTASL
                     AKQPKAEINYVYTAMHGVGYEVLSKTLEKAGLPQPHLVSEQIQPDGSFPTVNFPNPEE
                     KGALDLAIKLAKEKNAEFIIANDPDADRLAVAVPDAQGNWKPLHGNVIGCFLGWYLAK
                     QFHAQGKQGVLACSLVSSPALAEIAKKYGLSSEETLTGFKYIGKVENLLFGFEEALGY
                     LVDPDKVRDKDGISAAIMFLDLVCSLKQEGKTLADYTTEFVQEFGAYVSGQISIRVCD
                     LAEIGKLMTALRNNPPSEIGGFKVAEFIDHTKTTRQNDILVFVLENGSRLIARPSGTE
                     PKIKFYLDARGTDAENAEQVLAQFDESVRSLLRQEEYGKQDC"
BASE COUNT         2640 a         2361 c         2076 g         2772 t
ORIGIN      
        1 cacgcattct atttcctata ttctaaaaat aatagagtat tttatacttt agttaaatac
       61 tcgctgcttt atattaaagg gcgtatttta tacgcccaat tttgttattt ataattaagc
      121 ctttacattc gcttttaaga acgcaagtaa gctctctttg gcgatcatct gtttttcacc
      181 gctgcggcgg tttttgtatt cgatttcgcc gttctcgagg tttttctcac caataaccac
      241 catatgcggc acaccgataa gctccatatc cgcgaacatc acgcccgggc gttctttacg
      301 atcatcaaaa atcacctcaa cgccttgagc ttttaagtta gcgtataact cttcagcgaa
      361 tgcctgcact ttttccgatt tgtgcatatt catcggcaca atcgccaccg taaatggcgc
      421 catttcatca caaggccaga taataccacg atcatcataa tgttgttcaa tcgcagctgc
      481 caccacacgg gtaacgccga taccgtaaca acccattgtc atcactagcg gtttaccgtc
      541 ttcaccttgc acagtggctt tcattgcttc tgagtatttt ttgcctaatt ggaaaatatg
      601 ccctacttca atacctcgtt tgatttgaag tgtgccttta ccgtccgggc ttgggtcgcc
      661 ttccaccaca ttgcgtaaat ctgcaatttc cggcacagca acatcacgct cccagttcac
      721 gttaaagtag tgtttgccat caatattcgc accgcagcca aaatctgaca tcaacgccac
      781 tgagcggtca ataatcaccg gaaccggcat attcaccaca cctaacgagc caacaccggc
      841 accgattttg gctttaattt ccgcttcatc ggcaaactca agcggatcag ccaccaacgg
      901 gtgtttttga gctttaattt cgtttaactc gtggtcgcca cgaatcacta acgcaattaa
      961 cggttgctct tcagttgccc ctttcaccac taaggttttc accgtttttt caatggctaa
     1021 accgtgattt tctactaatt cattgatggt tttcgcattt ggcgtatcca ctaattgcat
     1081 ttctgccgtt ggtgcttggc gttcacccac cgcaaccgct tcggctaatt caatattggc
     1141 agcaaaatct gattcggttg aaaataccac atcatcttca ccgcttgagg ctaacacttg
     1201 gaactcgtga gaggctgaac cgccgataga gccggtatct gcctgcaccg cacggaaatc
     1261 taagcccaaa cgggtgaaaa tattgctgta aacctgatac atcacatcat aggtttcttg
     1321 caggctctct tgtgtggtgt ggaaagaata ggcatctttc atcacaaatt cacgcgaacg
     1381 cattaccccg aaacgagggc ggacttcatc acggaatttc gtttgaattt ggtataaatt
     1441 cagcggaagt tgtttgtacg aagaaacttc acggcgaacc aagtcggtaa tcacttcttc
     1501 gtgagtcggg ccaagcacga aatcacgctc gccacgatct ttaaaacgta ataattccgg
     1561 gccgtaatca ttccaacgac cggattccac ccataattcc gccggctgaa ccaccggcat
     1621 taatacctcg atagccccgc ctttgttcat ctcttcacga ataatatttt ccactttttt
     1681 caacactttg atcccggtcg gcaaccagtt gtataaacct gacgccatcg ggcgaatcat
     1741 tccggcacgc aacattaatt gatggctaac tacttgtgca tcattcggca tttctttaag
     1801 ggttgaaaat aaatattgac ttgtacgcat tgctattcct attcttttta aactttgaaa
     1861 cctgaaaaaa tctgcttatt ttaaaacaaa gcggttaaat tttcaggaaa ttttgcaaaa
     1921 tcctataaaa aaataaccgc ttgtaagcgg ttattttgtt ttaactaagg gtattttctt
     1981 aaactgtgta tgcttaattt tctcgttcaa tttgctcaat aatctcttgc cattcggcat
     2041 ttgcttgttc aagagtaaaa atctgacctt tttcgatttc tgccagacct ttttttactt
     2101 tagcctctaa atattcatca taatcttttt ctttaaacat tattcccccg aatacattgt
     2161 ttaatttttg ttccattata tattgaatat ggaaaaacgg aaacctagat ttccgttttt
     2221 agtaatggct agcccaacaa tttatttacc cgtttaataa aggctgtcgg gttttccaac
     2281 gtgcctcgtt cagcaagcag agcttgttca aacagcagtt caatccaatc ggcgaactcg
     2341 gcttcatcgg caagatcagc tacttttttc accattgggt gatctgggtt cagctcaaaa
     2401 gtatatttca cttctggtgc ttgttgcccc attgctgcaa acagttttgc catttgggtg
     2461 gtcatttcat cgttgtcagt ggaaaccact gccggtgtgt cggttaagcg gtgagtcagc
     2521 accacgtttt tgacccgttc accaaagtag cctttcgccc gttctaagaa cgaaccaaac
     2581 tccgcctgtt gggctttttg gctctcttct tcctgcttgt cggcaagctc gcctaagtct
     2641 aagtccgact tggtaatgct ttgtagcggt ttgccgtcaa actcggtgag gtggctaacc
     2701 aaccattcat caatgcggtc ggaaagcagt agcacctcaa tgcctttttt gtggaacagc
     2761 tctaagtgcg ggctgttttt agccgcttgg tagctgtctg cggttaagaa gtagatcgct
     2821 ttctgcccct ctttcattct tgcaatataa tcggcaaaac tgaccgcttg ttcgctgtca
     2881 tcacgctggg tggaggcaaa acggagtaag cctgcaacct gttgtttgtt ggcaaagtct
     2941 tcgcccacgc cctctttcag caccacgccg aacgcttgcc agaattgggc atatttttcg
     3001 gcatcgtctt tcgccaattt ttccagcagt tgtaacgcac gcttggttaa ggcagaacgg
     3061 agcgattggg taactttatt ctcttgcaga atttcacggc tgacgttgag cggcaggtcg
     3121 ttggtgtcga gcaagccacg cataaaacgc aagtagttcg gcataaagac ttccgcatcg
     3181 tccataataa atacacgctg aacgtagagt ttcaagccgt gtttttgctc gcgttggaac
     3241 agatcccacg gggctttgct cggcacatac agcaagctgg tgtattcttg cttaccttcg
     3301 actttattgt gcgaccaaat cagcgggtcg gaaaaatcgt ggctgaggtg tttgtaaaat
     3361 tcggtgtact cctcgtcact aatctcattt tttgagcgtg tccaaagcgc ttgagctttg
     3421 ttaatttttt cccatttttg accgcttgct ttgccctcgt catcgtattc attggtctga
     3481 atttccaccg ccaggccgat atggtcggag tatttgccga taatctcacg caaacgccat
     3541 tcgtttaaaa actctttttc gtcctcacgc aagtgaagaa tgatttccgt gccacgctct
     3601 tttttctcca gatcggcaac ggtgtaatcg ccctcaccgg cagattccca aatcacgcct
     3661 tgctcggcag gcactccggc ggcacgggtt ttgactgtca ctttatccgc cacgatgaaa
     3721 gaagagtaaa agcccacgcc gaactgcccg ataagctggc tgtctttggc ttgatcagtg
     3781 ccgagtgcgt tcaaaaattc tttggtacca gattttgcaa tcgtaccgag atggtcgatc
     3841 acctgctcac gggtcatacc gataccgtta tcggcaatcg taatcgtacc gagtgtttca
     3901 tcaacagaga cacgcacacg cagttcgcca tcaccttcat acaaagccgg ctcggaaagg
     3961 gctttaaacc gcaatttatc ggcggcgtca gaggcgttgg aaataagctc acgcaggaaa
     4021 atttctttgt tggagtaaag cgagtggatc atcagttgca ataactgttt cacttccgac
     4081 tggaagccac gggtttcttg attatttgcc attgtgtatt cctttattca ttaaaaaaca
     4141 gggaatagat ggggcaagtg gtcagatttt caagattttt tgcaaaatat ctgttgccaa
     4201 atagcgaatt aattgaaata tattactaca tttaataaaa tacactcatc tttttactac
     4261 attttggaga tcgatatggc aataatcatt acttccagag aatttaatca aaatgccagc
     4321 aaagtgttaa aaatggcaga aaaagagccg gtttttatta ccaaatgggg caaaatcgtc
     4381 aatgtggtgt ctagttatat ggattatcag cagaaaaagc ctagcgagcc aagctttgaa
     4441 gagctattcg cctcttccga aaatgaggat gtgagcgatg aattttggca agagtttgaa
     4501 caaacattgg ttgaaatccg caaaagcaat aaaccaagac ctgttgattt tggagatgag
     4561 taatgtatcg ctaccttttt gataccaata tagtttccga gctttataag ttaagaaatg
     4621 acaagatgga tgtcaatgtt cgccagtggc tgagaggggt taatcctagc cagaccaata
     4681 tcagctgtat tacgttatct gaaatcaaaa caggtatttt gctgaaagcc cgcaaagaca
     4741 aagaacaatc agaccgatta aatgattggt ttgaaaataa tgtattaaag gcttatcaaa
     4801 caaaagcgtt tgtggtgaat aacgacattg ctctattggc atcagagtac catattccca
     4861 ataaaatgga tttaaatgat gcttatattg cggcaaccgc caaataccac aatctgattt
     4921 tagtcacccg caacaccaaa gattttatcc gttgtgatgt gcgtttattt aacccatttg
     4981 aaaccgcata aataatgagt gaacaattat tagacggcgt gccattaacc gccctttccg
     5041 gcgtaggagc ggcaatttcc gaaaagttaa gtcgaatcgg cattaataat gtgcaggatt
     5101 tactgtttca tctgccaatg cggtatgaag atcgcacccg tattaccccg attgctgatg
     5161 ttcgcccgga aagctttgcc accattgaag gctatgtaca acttaccgaa gtccagtttg
     5221 gtaaacgccc gattttatcg gttacactct ccgacagcac cagcaaaatt atgcttaaat
     5281 tcttcaattt caatgctgga atgaaaaata gccttgccac cggcgttcgg gtaaaagcct
     5341 ttggggaaat taagcgtggg cgatttatgg cggaaattca ccaccctgaa tatcaaatta
     5401 ttcgggataa tcaaccgctt gtactggctg aaaccctgac cccgatttac tccaccactg
     5461 aggggttaaa acaagcctcg ctgcggaaat taaccgagca agccctcgct ttattagaga
     5521 aagtgaaagt cgccgagctg ttgcctgatg aatacaatcc gcacaaatac agcctaaaag
     5581 aagcgttgca gttattgcac cgcccaccgc cgacgatttc tgccgaagtc ttggaaaaag
     5641 gtgaccaccc tgctcaaaaa cggctgattt ttgaagaact gctggcacac aatttagcga
     5701 tgcagcaact ccgtttaggg gtaaaacagc aatatgcaga ggcacttact taccaaaccg
     5761 atataaaaca gcgttttctc gacagtttgc cttttaagcc tactcacgca caaagccgag
     5821 taaccgcaga tattgagcaa gatcttgcca aaccacaccc gatgatgcga ctggtacaag
     5881 gcgatgttgg ttcaggtaaa accttagtag ccgccttggc agcactatta gcgattgata
     5941 acggcaagca ggtggcatta atggcaccga ccgaaattct tgccgaacag cacgccaata
     6001 attttgccaa ctggcttaat ccctttggga ttgaggttgg ctggcttgcc ggtaaagtga
     6061 aaggcaaggc gagaaccgca caacttgagg caatcaaaaa cggtgatgtg cagatgatta
     6121 tcggcactca cgccctgttc caagacaatg tggaatttca ccatttagcg ttggtgatta
     6181 ttgatgaaca acaccgtttt ggcgtacacc aacggctgac cttgcgggaa aaaggagcga
     6241 aagaaaataa ctatccgcat cagttcatta tgacggcgac ccccattccg agaacgctgg
     6301 caatgacggt ctatgctgac ctcgacacct caatcattga cgaactgcca ccgggtagaa
     6361 cgccaatcac gactgtggtg atttctgaag atcggcgagc agaaatcgtc caacgggtgt
     6421 accaagcctg taagcaagaa caccgccaag cctattgggt ctgcaccctg attgatgaaa
     6481 gcgaagtgtt ggaggctcaa gccgcggcag cgattgccga agatttacag cgagccttgc
     6541 cggatttacg catcgggtta gtacacggac ggctgaaacc acaggaaaaa caagcgatta
     6601 tggcggaatt taaggcagcg aatttagatt tgctggttgc gaccaccgta attgaagtgg
     6661 gagtggacgt gccgaatgct agcctaatga ttatcgaaaa ttccgaacga ctcgggctgg
     6721 ctcaactcca ccagttgcgt ggacgtgttg ggcgaggggc aaccgcctcg cattgcgtct
     6781 taatgtacaa accgccgctc gggaaaattt ccagcaagcg gttacaagtg atgcgtgata
     6841 gccaagacgg tttctacatt gccgaaaaag atttggagat tcgaggcaca ggtgaaattc
     6901 tcggcacaaa acagaccgga atggcagaat ttaaggtggc ggatttaatg cgagaccgca
     6961 aaatgattcc gctggtgcaa cgttacgcca agcaaattat tagcgaaaat caaccgcttg
     7021 cagaggcgtt aattaagcgt tggttagaca acaaggcgga atataccaac gcttaaccgg
     7081 caagcgggtt atttagatta cggcaggttt ttcaccgatt caattaccaa atcccaaaag
     7141 cgggatttgt ctaatttttt tgctacccaa gtattacact gttttggcgg gtagcggaaa
     7201 tccgccaccg tcatacccag tgtatgcgtg cctgttagct caatattgac cggcacttgc
     7261 tgaacttcaa tcaggcttgg gtcaatcaca tacgccaccg cacaggcatc gtgaaccggt
     7321 ggagcatcaa agccttgagc ctgtttctac attttggcga agaacgccag caattccacc
     7381 acaaactgcc ccgatttgct gtttaatgcc ttaaagcgtt caaccacatc gggggtcgca
     7441 agtgcttggt gagttaagtc taagccgacc atcgtcacct tccaaccggc attaaacaca
     7501 atatgagcag cttccgggtc aattttaata ttaaattctg ccaccgcact ccagttgccg
     7561 gtgtgataac ctccgcccat cagcaccact tctttcactc tttcaataat acggggctca
     7621 aggcgggcag ctagagcaat attggttagc ccaccggtcg gcactaaggt aatgcttttc
     7681 tccgggtgcg acattatcaa atcaataatt aattgagcgg cgtgtttttt ctcaaattgt
     7741 cgggtagatt cagggagtac aggcccatcc attcccgaat caccgtgaat atccggggca
     7801 ttttccactt cacgaaccag cggtctggca caacctttgg caaaaggaac gttgcaaata
     7861 tgagcaattt ccgcaaccgc caacgcatta cgcgatactt tttctaaggt ttgattgcct
     7921 accaccgtag tcactgccaa caaatcaata ttcggattcc cccaagcgag catcatcgca
     7981 atcgcatcgt catgccccgg atcacaatct aaaataattt tttgagccat tattgtctcc
     8041 tttaaaaaag ggagagccta agctccccct caattaatgc cattagcaat cttgtttgcc
     8101 gtattcttct tggcgaagca gcgaacgcac actttcgtca aactgagcca gcacttgctc
     8161 tgcgttttca gcgtctgtgc cacgagcatc taaatagaat ttaattttcg gctcagtacc
     8221 tgaagggcga gcaatcaaac ggctgccatt ttccaacaca aacactaaaa tgtcattttg
     8281 gcgtgtggtt ttagtatggt caataaactc agccacttta aagccaccaa tttcgcttgg
     8341 aggattgttg cgtaacgccg tcattaattt gccgatttcg gctaaatcac aaactctgat
     8401 cgaaatttga ccgcttacat aagccccgaa ctcttgtaca aactcggtgg tgtaatccgc
     8461 aagggttttg ccttcttgtt tgaggctgca taccaaatct aagaacataa tggcagcgga
     8521 aataccgtct ttatcacgca ctttgtctgg gtcgaccaaa taacctaagg cttcttcaaa
     8581 gccaaataat aggttttcaa ctttgccgat atatttaaag ccggttaagg tttcttccga
     8641 gcttaaaccg tattttttcg caatttcagc taacgccgga gaggatacta acgagcaagc
     8701 caacacgcct tgtttacctt gtgcgtggaa ttgtttggct aaataccaac ctaagaaaca
     8761 gccgatcacg tttccgtgca gtggtttcca attgccttga gcatcaggca cggctaccgc
     8821 taaacggtca gcatccgggt cgttggcgat aataaattcg gcatttttct ctttcgccag
     8881 tttaatcgct aaatctaacg cccctttctc ttccgggttc gggaaattaa ccgttgggaa
     8941 tgagccatcc ggctgaatct gctcactaac taaatgcggt tgtggtaagc cggctttttc
     9001 taacgttttg cttaacactt cataacccac accgtgcatt gcggtataaa catagttaat
     9061 ctcggctttt ggctgtttgg ctagtgaggc ggttttctca atataagcat ttaccacttc
     9121 atcgtctaac accgtgaaat cttggctacg aggtaaatca cgaatatcgc atgctgctac
     9181 tttatcaatc agagcagcaa tttctttatc tgccggcgaa acaatttgtc cgccaccgtt
     9241 ggctttacct aaataaactt tatagccgtt atcttccagt gggttgtggc tggcagttac
     9301 catcacgccg gctgtggtat caaaatattg aatcgcatag gcaagcactg gtgttggcaa
     9361 tttgcgagga agcaggtacg ttttaatgcc tgccgctgcc ataatttcag cggtatcacg
     9421 ggcaaacaca tcggaatttt tacgaccgtc ataaccaatc acaattgacg gttctttatc
     9481 ataaccttta ataaactcag ctaaaccacc ggcagcttgt gccactaaaa cacggttcat
     9541 tcccattgag cctgcttgta agcgaccacg taaacccgcc gtaccaaact gcagacgtcc
     9601 gtcaaaacga gctgttaatt ctgcttttgc tttctcgtcc gattctgccg cttgaattaa
     9661 ctgctctaat tccgcacggg tctctgcatc cgggtcttgg gctaaccaat tttgtgcaac
     9721 ttggaaaata gtcatttttt actcctatgt aatttaaaaa ctctgtttag attagcccaa
     9781 agtcctttta tttaaaagga gatatttctt tttttgtgat cgggctatca aataaaaaga
     9841 tttgtcaga
//
LOCUS       DANLXD010000094         9836 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.094, whole genome shotgun sequence.
ACCESSION   DANLXD010000094 DANLXD010000000
VERSION     DANLXD010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9836)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9836)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9836
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.094"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            165..845
                     /locus_tag="PXD18_002014"
     CDS             165..845
                     /locus_tag="PXD18_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00153 family protein"
                     /protein_id="HDL6302407.1"
                     /translation="MALNNILGLFAQSPLKPLQKHSNKVTECSELLESFFEATFEHDW
                     EKAAEVRGKIVDLERRADALKREIRLKLPRGLFMPVERGDLLELVTQLDKLANYSRDI
                     SGRIIGRKLIIPTEMQPLFKKFLSRSIDASRQVRKVLDEMDQLLETGFRGRELDFVNK
                     MILELDQIEDDTDQYQITLRHTLLELEKNLNPIDVMFLYKCIERISVLADQAQRIGSR
                     IELMLAKS"
     gene            857..2125
                     /locus_tag="PXD18_002015"
     CDS             857..2125
                     /locus_tag="PXD18_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HDL6302408.1"
                     /translation="MELLNQYGSILVIITAIVGFMMAFGIGANDVSNAMGTSVGSGTI
                     TIKQAILIAMVFEFAGAYLAGGEVADTIKSGIIDPAQFANSPDILVLGMMASLCAAGM
                     WLIIATKMGWPVSATHTIIGAVIGFALITIGSDAIQWDALGGIVGSWFVTPILAGIVA
                     YSIFINSQKLIFNRSNPFKQAKKYGPMYMGITIFILVIVTVSKGLKHVGLHLDTAETL
                     GISFALALLAFIIGYFYFRSKSFAMKARAEEKGFAGVEKIFSILMLITACAMAFAHGS
                     NDVANAIGPLAAVESIVRSGGMIEGKTTLAPWILPLGALGMMIGLAIMGKNVMATVGT
                     GITDLTPSRGFAAQFACAVTVVIASGTGLPISTTQTLVGAVLGVGFARGIAALNLGVI
                     RNIVISWVITLPVGAVLSIIIYYILSAIFY"
     gene            2180..2791
                     /locus_tag="PXD18_002016"
     CDS             2180..2791
                     /locus_tag="PXD18_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDL6302409.1"
                     /translation="MKKLSSALLSCFLLGLSSPALTADTYITENLSTFMRKGAGDQFR
                     ISGAIQAGEKVTVLDRKERYSLIRDSRNREGWVLNSDLSDTASPKELIPQLKQQVQDL
                     TNRLSKIDTEWQQRTAEMQRRTQDSVQKSSDLVEENAQLKRELEILKNKNRDLETMHD
                     SEKREIVIQWFIYGGAVLGAGLLLGLLVPFLIPRRRRNNSGWA"
     gene            complement(2845..4143)
                     /gene="aroA"
                     /locus_tag="PXD18_002017"
     CDS             complement(2845..4143)
                     /gene="aroA"
                     /locus_tag="PXD18_002017"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HDL6302410.1"
                     /translation="MEKLTLTPISRVEGEINLPGSKSLSNRALLLAALATGTTQVTNL
                     LDSDDIRHMLNALKALGVKYELSDDKTVCVVEGIGGAFKVQNGLSLFLGNAGTAMRPL
                     AAALCLKGEEKSQIILTGEPRMKERPIKHLVDALRQVGAEVQYLENEGYPPLAISNSG
                     LQGGKVQIDGSISSQFLTALLMSAPLAEGDMEIEIIGDLVSKPYIDITLSMMNDFGIT
                     VENRDYKTFLVKGKQGYVAPQGNYLVEGDASSASYFLASGAIKGKVKVTGIGKKSIQG
                     DRLFADVLEKMGAKITWGEDFIQAEQSPLKGVDMDMNHIPDAAMTIATTALFAEGETV
                     IRNIYNWRVKETDRLTAMATELRKVGAEVEEGEDFIRIQPLALENFQHAEIETYNDHR
                     MAMCFSLIALSNTEVTILDPNCTAKTFPTYFRELEKLSVR"
     gene            complement(4189..5283)
                     /locus_tag="PXD18_002018"
     CDS             complement(4189..5283)
                     /locus_tag="PXD18_002018"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDL6302411.1"
                     /translation="MQFINIANEGVKSLSPYQAGKPIEELERELGIQNIIKLASNENP
                     FGFPESAKKAILNQLDDLTRYPDSNGFELKTTIAQKFGVQANQITLGNGSNDLLELFA
                     HTFAGEQDEIIYSQYAFIVYPLVTKAINAVAREILAKNWGHNLDAFLAAITEKTKLIF
                     IANPNNPTGNFLTQAEIEGFLAKVPANVIVVLDEAYTEFTAPQERVDSFGLLAKYPNL
                     IVSRSLSKAYGLAGLRIGYAVSNPEIADLLNRVRQPFNCNSLALASAIAVMNDDEFVK
                     KVAENNRLEMARYEAFCQANGLEYIPSKGNFITIDFKRPAAPIYEALLREGVIVRSIA
                     GYGMPNHLRISIGLPQENERFFTALLKVLA"
     gene            5555..6874
                     /locus_tag="PXD18_002019"
     CDS             5555..6874
                     /locus_tag="PXD18_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HDL6302412.1"
                     /translation="MNHLLYSVEDKPPFGLSLLLASQHLLAALGGIIAVPLVLGNVLK
                     LSTADTIILVNAALLISGIVTIIQCRGIGPIGIRLPSVMGTSFTFVAAALAIGFSESG
                     IAGIMGASLVGSLVMIIGSFFMPYIRKLFPPVVTGTVIMMIGLSLIPVAVDWFAGGQR
                     TDPHYATPENLIMASFVLIIVVALVQWGKGIFSAAAIVIGMMIGYIVSLALGWVSFNG
                     VKEAQLFALPQPLHFGLEFPISGIIGMSIAYLVTIVESSGNFLALGNATKTEITGKHL
                     RGGVLCDGLGSAFAAIMSTTPFSSFSQNIGVISLTGVASRYVVAFTGALLVLAGLFPV
                     FGALIVSIPLPVLGGAGLMMFAMIIAAGIQMLDNIQRSKRNGLIIAISIGCGLAVTTR
                     PELLDKLPHFFKEVFGSGITVGSLLALILNLVLPEDKITKKENKSDE"
     gene            complement(7044..8987)
                     /gene="ftsH"
                     /locus_tag="PXD18_002020"
     CDS             complement(7044..8987)
                     /gene="ftsH"
                     /locus_tag="PXD18_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HDL6302413.1"
                     /translation="MVKNILLWVVIAIVMMTAYEGFNSNFSGSSNTVPYSTFLSDIKE
                     NRLKGVDFKQNDDTILVTKNDGATYQTVMPMYDEYLMADLAKTNAVITGQPAERRGLL
                     SQILISWFPMLLLIGFYVFYMRQMQGGGGRGAMGFGKNKAKMLTADEVKTRFSDVAGC
                     DEAKEEVGEVVEFLRDPTKFQKLGGRIPKGILMVGPPGTGKTLLAKAIAGEARVPFFT
                     MAGSDFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRKRGGAGFSGGHDERE
                     QTLNQMLVEMDGFEGSEGVIIIAATNRADVLDDALTRPGRFDRQVTVDLPNVKGREQI
                     LKVHLKKVPLAEGVDPMQIARGTPGYSGAQLANLVNEAALFAARKNKRVVMMEDFEEA
                     RDKINMGPERRSNTMTEKEIINTAYHEAGHVIVGYLMPEHDPLNKVTIVPRGQALGFA
                     QFLPEGDRVSETFTKLESQLSTLFAGRIAEGLIFGEDKITTGASSDIHRATQIARAMV
                     TQWGFSKELGPIFYQNEDGMGAIKGVSEESQKLIDVEMRKIIDRNYQRAKQTLEENMD
                     ILHAMKDALLKYETLDSKQIDDLMARRPVGEPSGWTDTPTKDDNATPPSGEQAADVSS
                     TLEDNPNKDNNIGDSLADTKAEH"
     gene            complement(9108..9734)
                     /gene="rlmE"
                     /locus_tag="PXD18_002021"
     CDS             complement(9108..9734)
                     /gene="rlmE"
                     /locus_tag="PXD18_002021"
                     /EC_number="2.1.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uridine(2552)-2'-O)-methyltransferase
                     RlmE"
                     /protein_id="HDL6302414.1"
                     /translation="MGRKRSASSSRWLAEHFKDQFVQKAHKQKLRSRAYFKLDEIQQT
                     DRLFKPGMTVVDLGAAPGGWSQYVVTQIGSKGRVIACDILDMNPIVGVDFLQGDFREE
                     SVLNALLERVGEDKVNVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCRQVLATKGSF
                     VVKVFQGEGFDEYLREIRSLFSVVKVRKPEASRDRSREVYIVATGYKG"
BASE COUNT         2767 a         2101 c         1902 g         3066 t
ORIGIN      
        1 aacaagcata aatttcttcc attttttgca aaaaaattat taaaacaaac cgcttgtctt
       61 aaaaacataa tttaatttcg tgatctttac taatacatca agtaaaatac gccggacttt
      121 acagtaagaa gtcattgtca atattatcac tatggagata ttttatggca ttgaataaca
      181 ttttaggttt attcgcccag tccccactta aaccgttaca aaaacactca aataaagtga
      241 ctgaatgtag cgagttatta gaatcttttt ttgaagcgac ttttgaacat gattgggaaa
      301 aagcagctga agtgcgcggt aaaattgttg atttagaacg ccgcgcagat gcccttaaac
      361 gtgaaatccg cttaaaactg cctcgtggtt tatttatgcc agttgaacgc ggtgatttat
      421 tagaactagt cacacaatta gataagttag caaactattc aagagatatt tccggtcgca
      481 ttattggtcg taaattaatc attcctaccg aaatgcaacc acttttcaaa aaattccttt
      541 ctcgtagtat tgatgctagc cgtcaggtac gcaaagtttt ggatgaaatg gatcagttat
      601 tagaaactgg ttttagaggg cgagagcttg atttcgtcaa taaaatgatt cttgaacttg
      661 accaaattga agatgatacc gaccaatatc aaattacatt acgtcataca cttcttgagt
      721 tagaaaaaaa cctgaaccct attgatgtga tgtttttata caaatgtatt gaaagaatca
      781 gcgttctagc tgaccaagcc cagcgaattg gttctcgtat tgaacttatg ctggcgaagt
      841 cataggagaa aattaaatgg aattactcaa tcaatatggc tcaatactgg tgattattac
      901 tgctattgta gggtttatga tggctttcgg tattggtgct aatgatgttt caaatgccat
      961 gggaacatcc gtcggctctg gaacaattac gattaaacaa gctattttaa ttgctatggt
     1021 atttgaattt gctggtgctt atctggcagg cggtgaagtc gcagatacaa ttaaaagtgg
     1081 cattattgat ccggcacaat tcgccaatag ccctgatatc ctggtacttg gaatgatggc
     1141 atctctctgt gctgccggaa tgtggctaat tattgcaact aaaatgggtt ggccggtttc
     1201 agcaactcac acaatcattg gtgccgttat tggttttgca ttaatcacta ttggttcaga
     1261 tgcaattcaa tgggatgcat taggtggaat tgttgggagt tggtttgtga cccctattct
     1321 tgcggggatc gtagcatatt cgatctttat taactcacaa aaactgatct ttaaccgctc
     1381 aaacccattc aaacaagcga aaaagtatgg cccgatgtac atgggaatta ctatttttat
     1441 tttagttatt gtaaccgtgt caaaaggctt aaagcacgta ggattacatc tagatacagc
     1501 tgaaacattg ggaatttcat tcgcgcttgc cttacttgct tttatcattg gatattttta
     1561 tttccgcagt aaaagctttg caatgaaagc tcgtgcagaa gagaaaggct tcgctggcgt
     1621 tgagaaaatt tttagtattt taatgcttat tacggcctgt gctatggctt ttgctcatgg
     1681 ctctaatgat gttgctaatg ctattgggcc tctagctgct gttgaatcta ttgtaagaag
     1741 tggtggaatg attgaaggta aaacgacttt agccccttgg attctcccac taggcgcctt
     1801 aggtatgatg attggtttag ctattatggg caagaatgta atggctacag taggtactgg
     1861 tattaccgac cttactccaa gccgtggctt tgctgctcaa tttgcctgcg ccgtcacggt
     1921 tgtcattgca tcaggtactg gtttaccaat atcaacaacc caaacgcttg taggagcagt
     1981 attaggtgtg ggattcgccc gtggtattgc tgcacttaac ttaggcgtta ttcgtaatat
     2041 tgttatatca tgggtaatta ccttgcctgt aggtgctgtg ctttcaatta ttatctatta
     2101 tattttaagc gctattttct attaattttt caaaaagaat acaggcaact gtattcttcc
     2161 tagctttaga ggaatatata tgaagaaatt atcatcagct cttctgtctt gttttttact
     2221 cggcctatct agccctgctt taacggcaga cacttacatt actgaaaatc tgagtacatt
     2281 tatgcgcaaa ggtgctggtg atcaattccg catttcaggc gctattcaag caggtgaaaa
     2341 agtcacagta ttagatcgta aagagcgcta cagtctgatt cgagatagtc gtaaccgtga
     2401 aggttgggta cttaattcag acttaagcga tactgctagt ccaaaagagc tgattcctca
     2461 attaaaacaa caggttcaag atttaaccaa tcgcctgagc aaaatcgata ccgaatggca
     2521 acaacgtacc gcagaaatgc aacgtagaac gcaagattca gtgcagaaaa gcagtgattt
     2581 ggttgaggaa aatgcacaac taaaacgtga actggaaatc ctgaaaaaca aaaatcgtga
     2641 tttagaaaca atgcacgatt ccgagaaacg tgaaatcgtg attcagtggt tcatctatgg
     2701 tggtgctgtg ttaggcgcag gtttactact tgggttactc gtgcctttcc tgatccctcg
     2761 ccgcagacgt aacaacagcg gttgggctta gtctgccaca ataaaacgta aaaaggattc
     2821 agttttctga atcctttttt acttttatct gaccgataat ttttccaact ccctaaagta
     2881 agtcgggaac gttttagcgg tacaatttgg atctaagatc gtcacttctg tattcgataa
     2941 cgcaattaat gaaaaacaca ttgccatacg gtgatcgtta taggtttcaa tttcagcgtg
     3001 ctggaagttt tctaacgcaa gcggttgaat ccgaataaaa tcttcccctt cttctacctc
     3061 tgccccgact ttacgcaatt cggttgccat tgctgtcaag cggtcggttt cttttacccg
     3121 ccagttataa atattgcgga taactgtttc tccttcggca aataaagcgg ttgttgcaat
     3181 cgtcattgcc gcatcaggaa tatgattcat atccatatct acgcctttta gcggggattg
     3241 ctcggcttga ataaaatcct ctccccaagt gatttttgcc cccatttttt ccaacacatc
     3301 ggcaaacaag cggtcgcctt ggatcgattt tttaccaatg cccgttactt ttaccttgcc
     3361 tttaatcgca ccggaggcta agaaataaga ggcagaagag gcatctccct ccaccaaata
     3421 attaccttgt ggagcaacat agccttgttt acctttaact aaaaaggttt tgtaatctcg
     3481 attttcaacc gtaataccaa aatcgttcat catcgaaagg gtaatatcaa tataaggttt
     3541 tgataccaga tcaccgataa tctcaatttc catatcgcct tccgctaatg gggcagacat
     3601 cagcaatgcg gttagaaatt ggctggaaat cgagccgtca atttgcactt ttccgccctg
     3661 caaaccgcta ttgctaattg ccaacggtgg atagccttca ttttctaaat actgtacctc
     3721 tgcccctact tggcgtaaag catcgactaa gtgtttaatc gggcgttctt tcattcttgg
     3781 ttcaccggta agaatgattt gggatttttc ctcacctttt aaacacaatg ctgctgcaag
     3841 tggtcgcatt gccgtgcctg cattgccgag aaacagtgat aagccgtttt gaaccttaaa
     3901 agctccacca atcccttcaa ctacacagac ggttttatcg tccgatagct catatttcac
     3961 gcctaacgct tttaaggcat tgagcatatg tcgaatatca tcactatcta ataaattggt
     4021 cacttgagtc gtaccggtgg ctaaggcggc taataataag gctcggttag acaggctttt
     4081 agaaccaggt aaattgatct cgccttctac tcgggaaatc ggggttaaag ttagtttttc
     4141 catttttctc tttaaatttg taaaattttc ataaaaggta accgcttgtt aagctaacac
     4201 tttcaataag gcagtaaaaa atctctcgtt ttcttgcggt aaaccgatac taatgcgtaa
     4261 atgattcggc attccataac ctgctatcga gcgaacaatc acgccttcac gcagtaatgc
     4321 ctcataaatc ggagcggcag gacgtttgaa atcaatagta ataaaattgc ccttagaagg
     4381 gatatattcc aagccgtttg cttggcagaa agcctcatag cgagccattt ccaagcggtt
     4441 attttctgcc acttttttga caaattcatc atcattcatt accgcaatcg ctgaagctaa
     4501 ggcaagacta ttgcagttaa acggctggcg aacacgattt aataaatccg caatttcagg
     4561 gtttgaaacc gcataaccaa tccgaagccc ggctaagccg taagccttag agagtgaacg
     4621 tgacacaatt aaattcgggt attttgccaa taagccaaac gaatccaccc gttcttgagg
     4681 cgcagtaaac tcggtataag cttcgtccag caccacgatt acatttgccg gcactttagc
     4741 taaaaagccc tcaatttccg cttgggttaa aaaattaccg gtcggattat tcgggttggc
     4801 aataaaaatt aatttagttt tttcggtaat tgcagccaaa aaggcatcta aattgtgtcc
     4861 ccaattttta gccagaattt cacgggcaac ggcattaatc gctttcgtca ccaacggata
     4921 cacaataaac gcatactgag aatagataat ttcatcttgc tcaccggcga aggtgtgggc
     4981 aaacagctct aataaatcgt ttgagccatt gcctaaggtg atttgattgg cttgtacgcc
     5041 aaatttttgg gcaatagtgg tttttaattc aaagccgttt gaatccggat agcgggttaa
     5101 atcgtcaagc tgattcagaa tcgccttttt tgcactttca ggaaaaccaa atgggttttc
     5161 gttcgaggct aatttaatga tattttgaat ccctaattca cgctctagct cctcaatcgg
     5221 ctttcctgct tggtaaggcg aaagggattt cacgccctca tttgcgatgt tgataaattg
     5281 cataataacc tctgattatt cttataaaat ataagttcgg attgtagtaa agaatgattg
     5341 cctttaccag taaatttttt gttacaactg gaaagaaatt ggtacaaaca ttcggattag
     5401 ctttgcaaaa agcgtaaaaa atcttaccgc ttgtcattta tcagttaggg aaaataaaaa
     5461 atcactctct tatataaaaa caattacgca aacgattgct tattaaaaaa acttcagtat
     5521 aatgccgaca ttttttaact ctcgaggaat cactatgaac catttacttt attctgtcga
     5581 agacaaaccg cctttcgggc tgagcttatt gcttgcctca caacatttat tagccgcttt
     5641 aggtggcatt atcgctgtac ctttagtgct agggaatgta ctcaaactct ctactgcgga
     5701 tactataatc ttagttaatg ctgcactttt aatttcaggc atcgtcacta ttattcaatg
     5761 tcgaggtatt ggcccaatcg ggattagact accgagtgta atgggaacta gctttacgtt
     5821 tgttgcagca gcattagcga ttggtttcag tgaaagtggc attgccggca ttatgggagc
     5881 ctctttagtt ggctctctag tgatgattat cggcagtttt tttatgcctt atatccgtaa
     5941 gctttttcca cccgtggtaa caggtactgt cataatgatg attggcctaa gtttaattcc
     6001 tgttgcagta gactggtttg ctggtggtca gcgtactgat ccacactatg caaccccaga
     6061 aaatcttata atggctagtt ttgtattaat tattgtcgtt gctttagtac aatgggggaa
     6121 aggtattttt tcagctgctg ctattgtgat tggtatgatg ataggttata tcgtttcgct
     6181 agctctgggt tgggtaagtt ttaatggcgt gaaagaagca caactttttg cgttaccaca
     6241 acctctacat tttggcttag aatttccaat ctccggtatc atcggaatgt caattgctta
     6301 tttagttacc attgtagaat ctagcggaaa tttcttagca ctaggcaatg caactaaaac
     6361 tgaaattacc ggaaaacact tacgtggagg tgtattatgt gatggtttag gctcagcatt
     6421 tgcggcaatt atgtccacaa ctcccttttc ttctttctca caaaatattg gggtcatttc
     6481 attaaccggt gtagccagtc gctatgttgt agcatttaca ggcgcattac ttgtactagc
     6541 cggtttattt cctgtatttg gagcattaat cgtgtctatc ccgttacctg tgcttggcgg
     6601 tgcaggctta atgatgtttg ccatgattat cgcagccggt atccaaatgt tagataatat
     6661 tcaacgtagc aaacgaaacg gtttaattat tgctatctct atcggttgtg ggctggccgt
     6721 aacaactcga cctgagctat tggataagct tccacacttc tttaaagaag tttttggctc
     6781 aggtattacg gtcggctcct tattagcact tattttgaat ttagttttac ctgaagataa
     6841 aataaccaag aaagaaaata agagtgatga ataaatcacc ctaaaaaaac aaggacagct
     6901 cacaatacaa ctttgatgct gtcctttatt cccatagaga gcatatttaa atttaggtta
     6961 ataaaaaaat ctgcactcta tattggtgtt tacctttaga gtacagattt cttcttattc
     7021 taactttcta gcaaacaatt agattaatgt tccgctttgg tatcggctaa cgaatcccca
     7081 atgttattat ctttatttgg attatcctct aaagttgaac ttacatccgc tgcctgttca
     7141 ccacttggtg gagtggcgtt atcgtcttta gttggggtat ctgtccaacc tgatggttca
     7201 cccaccggac ggcgtgccat taaatcatca atttgcttgc tgtctaaggt ttcgtatttc
     7261 aataaggcat ctttcattgc gtgtaagatg tccatatttt cttccaaagt ttgcttcgct
     7321 cgttgatagt tgcggtcaat gatcttacgc atttccacat caatcaattt ttgcgactct
     7381 tccgatacgc ccttaattgc acccattcca tcttcatttt gatagaaaat cgggcctaat
     7441 tcttttgaga agccccattg agtaaccatt gctcgtgcaa tttgggttgc tcgatgaata
     7501 tcagaggaag cccctgtggt aattttatct tcaccaaaaa tcaagccctc agcaattcgc
     7561 cctgcaaata gggtggaaag ttggctttcc aatttggtaa atgtttcgct tacacggtca
     7621 ccttccggta agaattgagc aaaacctaac gcctgaccac gaggcacaat tgtcacttta
     7681 ttcagcggat cgtgttccgg cattaaatag ccaacaataa cgtgtccagc ttcgtggtaa
     7741 gcagtattga tgatctcttt ttccgtcatt gtatttgaac ggcgttccgg ccccatattg
     7801 attttgtcac gggcttcttc gaaatcttcc atcattacca cacgtttatt cttacgggca
     7861 gcaaataagg cagcttcgtt caccaagttt gctaattgag caccagagta acccggcgta
     7921 ccacgagcaa tttgcatcgg gtcaactccc tctgcaagcg gtactttttt caagtgaact
     7981 ttcaaaattt gctcacgccc tttcacgttc ggcaaatcga ccgtgacttg gcggtcgaaa
     8041 cgccccggac gagttaaggc atcatctaac acatcggcac ggttggttgc agcgatgata
     8101 atcacacctt cagagccttc aaagccgtcc atctcaacta acatttggtt gagggtttgt
     8161 tcacgctcat cgtgtccacc gctgaaacct gcaccaccac gtttacgccc taccgcatca
     8221 atttcatcaa taaaaataat acaaggggca tttttcttgg cttggtcgaa taaatcacgc
     8281 acccgtgaag cacccacacc tacaaacatt tccacgaagt cggaacctgc cattgtaaag
     8341 aatggcactc gtgcttcacc tgcaatcgct ttcgccaata aggttttacc cgtacccgga
     8401 gggcctacca tcaagatccc ttttggaatg cgcccaccta atttttgaaa tttagttggg
     8461 tcacgcaaaa actcaacaac ttcgcctact tcttctttgg cttcatcaca gccggctaca
     8521 tcagaaaatc tggtcttaac ttcgtctgcg gtcaacattt tggctttatt tttcccaaag
     8581 cccattgcac cacgtcctcc gccaccttgc atttgtcgca tataaaacac atagaaaccg
     8641 attaacagca acattgggaa ccaagaaatc aaaatttgcg agagcaagcc acgacgctca
     8701 gcaggctgac cggtaatcac tgcattggtt tttgctaaat ctgccattaa gtactcatca
     8761 tacatcggca ttacggtttg gtaggttgca ccatcatttt tcgtcaccaa aatggtgtca
     8821 tcattctgtt tgaaatcgac cccttttaaa cgattttctt taatatcgct taaaaaagtc
     8881 gaatatggca ctgtatttga gctaccactg aaattagaat taaaaccttc ataggctgtc
     8941 atcatcacaa tggcaatcac cacccaaagt aaaatatttt taaccatatc gttcaaggtt
     9001 aatcccctat ctgctgaata aaaaactgtt caagattact ataaaagcgg tcgaattttc
     9061 caattttttt gcaaaatgtt aataaaaaat gaccgcttgc ttgttttcta gcctttataa
     9121 cctgtcgcta caatataaac ttctcgagac cgatctcgag acgcctccgg ttttctgact
     9181 tttaccacac taaagagcga gcggatttct cgaaggtatt catcaaatcc ttcgccttgg
     9241 aataccttaa ccacaaaact gcctttggtt gctaatactt ggcgacacat atccaatgcc
     9301 aattccacta aatacattgc acgaggaata tcaaccgacg gcataccgct gaaattggga
     9361 gccatatccg acatcaccac attcactttg tcttcgccta ctcgctcaag taacgcattc
     9421 agcaccgatt cttcacggaa gtcgccttgt aagaaatcca cgcctacaat cgggttcata
     9481 tctaaaatat cacaagcgat tactctgccc ttactgccga tttgcgtcac cacatattgc
     9541 gaccaaccgc ccggtgcggc accgagatcc accaccgtca ttcccggttt gaataaacgg
     9601 tcggtttgtt gaatttcatc taacttaaaa tacgcccgtg aacgcaattt ttgtttatgt
     9661 gctttttgca caaattgatc tttaaaatgt tctgcaagcc aacgtgatga actcgcactt
     9721 cgttttctac ccatttgttc ttctatctta attaattcaa cgatttataa taagggttaa
     9781 attagcaaat tcaagagatg ttctaaaatt tagctcggct tattatgctt aattaa
//
LOCUS       DANLXD010000095         9147 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.095, whole genome shotgun sequence.
ACCESSION   DANLXD010000095 DANLXD010000000
VERSION     DANLXD010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9147)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9147)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9147
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.095"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            155..1114
                     /locus_tag="PXD18_002022"
     CDS             155..1114
                     /locus_tag="PXD18_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HDL6302415.1"
                     /translation="MVVNPESFEQIIGQSVKIKEVVEQAKKFANLDAPLLIQGETGTG
                     KDLFAKSCHHFGSRRMQKFIAVNCAGLPAEEAESEMFGHRGNGVESVGFFEYAHGGTV
                     LLDSISELSLEMQAKLLRFLNDGSFRRVGEDQEIQVNVRVICTSLQPLSLLVEKGKVR
                     EDLFHRLNVLTLNLPPLRDRKEDIPLLADYFIAQISNQLGVSKLEYDNVFLQALQNYH
                     WRGNLRELYNALYRACTLSHSYRLAVKDLHLPRDMEAMIEVREEATLEEMMSQYEAQL
                     LHQFYAEYPSTRKLAQRLGLSHTAVANKLRQYGLTKNGNSKDE"
     gene            1107..2858
                     /locus_tag="PXD18_002023"
     CDS             1107..2858
                     /locus_tag="PXD18_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6302416.1"
                     /translation="MNKLAVIFSVCFANLGLNSTAYAAPSIPQELLENSLVYCTTSSG
                     FSFNPQKSDVSSNMNVVTEQIYDKLVEFNPKKNRLEPALAESYSISDDGLVITLRLRK
                     NVAFHTTPWFTPSRKLNAEDVVFSLKRMIGKESDLPEVKSEPESVLHHQRQSYIYQKT
                     AGQIYFPYFESVDLANKIASIHSPSNDIVKIELVRPDSALLAHLASQYAVILSKEYAL
                     QLNADDNLVQLDLLPVGTGVYQLESYENNDYVRLKPNMNYWGKKAYIQNMVVDFSTEA
                     TGRMAKFLNNECDVVAFPEPSQLSVLNNRQLISSKGANLVYLAFNMQRGIGQDLALRQ
                     RIARGINRKRIAEKLFYGTGEVADNLLPTALWSKKNNGSYPYQPHQNSGEQAVEMHDS
                     IINRSLDSKTETEEVNQKQRLKLWVIDEKRVYNQHPLKMAEMIRADLATQNLEVEIRA
                     VSRAYLVQQLANKSADYDLILGGWLANNLDPNSFLEALLSCKAAETVTNLSNWCNEDF
                     DFWLQTARLSDDPASANLLYEFAQKLLEEQLPILPLMNANRVLVIKDGVKQADISPFG
                     QVKLSELRLGLGHKKGN"
     gene            2861..3826
                     /locus_tag="PXD18_002024"
     CDS             2861..3826
                     /locus_tag="PXD18_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL6302417.1"
                     /translation="MLIVFFRKIFLTLITLIFLSLISFNILLRDPLNHLAELGWFEAY
                     CYYVKSLLNGDFGISFSNGEPLTAQILQVFPATITLCLSALIVSLIIGLPLGFFAATQ
                     QKNMVGRLLNTLGSLSLAVPVFWLALVLMYYASLNQWEVSAIGEIHSLYPKQMVTGFL
                     LLDIWLSDVPYKLKMMQSALHHLALPTLVLAVPATLEVMHITQARAGYVMKQNYIKIA
                     KTRGWTPFRVWRTHIICNTLPALLPMIARTFILIFAFGMLIENIFSWGGIGRWLINAL
                     AIQDYNAISAGVVAIGVFVLLVDMVTGFVRVMLDPSDKKDWYGSY"
     gene            3813..4706
                     /locus_tag="PXD18_002025"
     CDS             3813..4706
                     /locus_tag="PXD18_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL6302418.1"
                     /translation="MAVIKEPEQFRETNAFKAFWFHFRQDKLALGSFYLFLLLLALIF
                     VGSLLAPYNYNEQFVGLELMPPSWDDKGQISHFLGTDDLGRDILSRIMYGFYYTLGSA
                     LMITLLIAIIGGMIGIYAGLKKGRSFWLISHLFDTFLFMPILLIAIIIATLMEASLVN
                     AMLAIFLAMLPHFIHKIYQATEKQLKKEYIITLKLDGASCWYLIREVIIPNLTGVAIK
                     ALSHIFVIAILDISALSFIMLGAKSPTPEWGAMIRESMELIYIAPWTVILPGLAIIFS
                     IFTVTILGTRLSVIFEKYRKE"
     gene            4777..5829
                     /locus_tag="PXD18_002026"
     CDS             4777..5829
                     /locus_tag="PXD18_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL6302419.1"
                     /translation="MALLDIRHLSIEIDMPKGRVKMVDNINLTVDEGEICGLVGESGS
                     GKSLIAKVICGMIKDEWIVSADRFRFDDIELLKLSPAERRKLVGDHISMVFQDPLTSL
                     DPSQQIGKQLMQTIQFRGKWWQRFGWKKKKAIELLHRVGIRDHQDIMKSYPSDITEGE
                     AQKVMIAMAVANQPRLLVADEPTNIMESTTQLQVYRLLSSMNQNLGTSILLVSNDMRS
                     IQNWVDSYNVLYCGQTVEIADKESILESSYHPYTRVLLNSSPDFSQPLAFKSSLNTLR
                     GSVPMLQEMPIGCRLGPRCPFAQKKCINKPPLVKVKQHEFACHFPINFREQNLLKNKT
                     ENTPFVVAEIAEKEAF"
     gene            complement(5838..6068)
                     /locus_tag="PXD18_002027"
     CDS             complement(5838..6068)
                     /locus_tag="PXD18_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HDL6302420.1"
                     /translation="MKLTACKLVFLLYLMFNLTACGTVLSLVEQDYRVYAGVIKDFQV
                     MQEGGIFAVLAVIDLPLSFVLDTLMLPVTLSQ"
     gene            6198..7280
                     /gene="leuB"
                     /locus_tag="PXD18_002028"
     CDS             6198..7280
                     /gene="leuB"
                     /locus_tag="PXD18_002028"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HDL6302421.1"
                     /translation="MQTYNIAVLAGDGIGPEVMAEAIKVLEATQQKFGFKLNFNQYNI
                     GGAAIDAQGKALPENTLKGCEEADAILFGSVGGPKWTHLLPDEQPERGSLLPLRKHFS
                     LFCNLRPAALYQGLEKFCPLRADIAAKGFDMVVVRELTGGIYFGQPKGRDGEGAQTRA
                     FDTEVYYKYEIERITRVAFESAMKRKKHVTSVDKANVLQSSILWRETVTEVAKEFPEV
                     TLEHMYIDNATMQLIKAPESFDILLCSNIFGDIISDEAAMITGSMGMLPSASLNEQGF
                     GLYEPAGGSAPDIAGKNIANPIAQILSAAMMLRYSFNLGDAADAIETAIQKALADGYR
                     TADLADDSKPLSTSEMGDIIAKNILA"
     gene            complement(7367..7762)
                     /gene="msrB"
                     /locus_tag="PXD18_002029"
     CDS             complement(7367..7762)
                     /gene="msrB"
                     /locus_tag="PXD18_002029"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HDL6302422.1"
                     /translation="MIKPIHALTEQQVDILINHGTERPFTGKFLNEHRVGIYRCARCH
                     NDLFHSDTKFDAGCGWPSFYQTISESSLRYLDDYSLGRHRIEIRCGNCDSHMGHVFPD
                     GPPPTGLRFCLNSAALNFKWEETGEEIDG"
     gene            7987..8991
                     /gene="gap"
                     /locus_tag="PXD18_002030"
     CDS             7987..8991
                     /gene="gap"
                     /locus_tag="PXD18_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010129843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDL6302423.1"
                     /translation="MAIKIGINGFGRIGRIVFRAAQHRDDIEVVGINDLIDVDYMAYM
                     LKYDSTHGRFDGTVEVKDGQLVVNGKAIRVTAERDPANLKWNEIGVDIAVEATGLFLD
                     DETARKHITAGAKKVVLTGPSKDATPMFVNGVNFDTYAGQDIVSNASCTTNCLAPLAK
                     VIHEKFGIKEGLMTTVHATTATQKTVDGPSAKDWRGGRGASQNIIPSSTGAAKAVGKV
                     LPALNGKLTGMAFRVPTTNVSVVDLTVNLEKPATYAEICAEIKRASENEMKGVLGYTE
                     DAVVSTDFNGATETSVFDAAAGIALTDTFVKLVSWYDNEVGYSNKVLDLVAHVYNYKG
                     "
BASE COUNT         2812 a         1623 c         1947 g         2765 t
ORIGIN      
        1 ataatctgaa tagggttgta aacaaaagtt tccaaaagag aaaaatagcg gtatgatcgc
       61 ctcacaatcc ctctcgcatt gttaactcta gtagctaata tcaggcttta agcgtattaa
      121 acaatgcaca aatttgctat ttataggaga ctatatggtc gtaaatccag aatcttttga
      181 acagataatt ggacaatctg taaagataaa agaggttgtt gaacaagcaa aaaaatttgc
      241 caaccttgat gcaccattat tgattcaagg tgagacggga acaggaaaag atttatttgc
      301 caaatcttgt caccattttg gatctcgtcg aatgcaaaaa tttattgccg tgaactgtgc
      361 cggtttaccg gctgaagaag cagaatcgga aatgttcgga catcgtggca atggcgttga
      421 gtccgtcggt ttctttgaat atgctcacgg tggtacagta ttattagact ctatttctga
      481 gttatcgctg gaaatgcaag ccaaattatt gcgcttttta aatgatggct cttttcgtcg
      541 agtgggcgaa gatcaagaga ttcaagtcaa tgttagggtg atctgtactt cattacagcc
      601 tttgtcatta ttagttgaaa aaggcaaagt aagagaagat ctgtttcatc gtttaaatgt
      661 tctcacttta aatttaccac ctttgcgaga tcgaaaagag gatattccat tattagctga
      721 ttactttatc gcccaaatta gcaatcagtt gggggtgagc aaattagagt atgataatgt
      781 ttttttgcaa gcattgcaga attatcactg gcgaggcaac ttaagagagc tttataacgc
      841 actttatcga gcttgtacac tttcgcatag ctaccgttta gcggtaaaag atcttcattt
      901 acccagagat atggaggcga tgattgaagt acgtgaggag gcgacacttg aggaaatgat
      961 gagccagtat gaagcccaat tattgcacca attttatgca gaatatccga gtacccgaaa
     1021 attagcacaa cggctcggac tttcacatac tgcggtggca aacaaattgc gtcaatatgg
     1081 gttaacaaaa aatggaaaca gtaaagatga ataaactagc ggtcattttt tcagtatgtt
     1141 ttgcaaattt agggctaaat tcgaccgctt acgcagcgcc aagtattcct caagagctac
     1201 ttgaaaatag ccttgtgtat tgcactactt catcgggatt ctcttttaac ccacaaaaat
     1261 ccgatgtgag ttcgaatatg aatgtggtaa cagagcagat ctacgataaa ttagttgagt
     1321 ttaatccgaa aaaaaatcga ctagagcctg ctttagctga aagttattca atcagcgacg
     1381 atggtttagt gattacatta cgtttaagaa aaaatgtcgc ttttcataca actccatggt
     1441 ttactccgag tcgtaaatta aacgcagaag atgtggtgtt ttcgctaaaa cgaatgattg
     1501 gtaaagaaag tgatttacct gaagtgaaaa gtgagcctga aagtgtatta caccaccagc
     1561 gacaaagcta tatttaccaa aaaacagcgg ggcagattta ttttccttat tttgaaagtg
     1621 ttgatttagc gaataaaatt gccagcattc attctccgtc aaatgacatt gtaaaaattg
     1681 aattagtccg tcctgattca gcattgttgg cgcatttagc cagccaatat gcagttattc
     1741 tgtctaaaga atatgcttta cagctcaatg cagatgataa cttagttcaa ctggatttat
     1801 taccggtagg aacaggcgta tatcaacttg aaagttatga aaataatgat tatgtgcgtt
     1861 taaaaccaaa tatgaattac tggggcaaaa aagcatatat tcaaaatatg gtcgtagatt
     1921 tttccacaga agcgaccggc aggatggcaa aatttttaaa taatgaatgt gatgtggttg
     1981 cttttccgga acctagccaa ttatcagtgt taaataatcg gcagcttatt agtagtaaag
     2041 gtgctaattt ggtttattta gcattcaata tgcaacgggg tattgggcag gatttggcat
     2101 tacgccaacg tattgcacgc ggcataaatc gcaaacgtat tgcagagaaa ttattttatg
     2161 gtacaggtga agtagcggat aacctattac caacagcttt gtggtcgaaa aaaaataatg
     2221 gaagctaccc ttatcaacca caccaaaatt caggtgagca agcggttgaa atgcatgaca
     2281 gtattataaa tcggtcttta gatagcaaaa cagagaccga agaagtaaac caaaaacagc
     2341 gcttaaaact gtgggtaatt gatgaaaaac gagtttataa tcaacaccca ttaaaaatgg
     2401 cagaaatgat acgtgctgat ttagctacgc aaaatttaga ggtcgaaatt cgcgcagtaa
     2461 gtcgagctta tttggtgcaa cagcttgcta ataaaagtgc ggattatgat ttgattttag
     2521 gtggttggtt agcaaataat cttgatccta acagtttttt ggaggcctta ctcagttgta
     2581 aagctgcgga aacggtgact aatttatcaa attggtgcaa tgaagatttt gatttttggt
     2641 tacaaacagc ccgtctaagt gatgatccgg catcagctaa tttattgtat gaatttgcac
     2701 aaaaattatt agaagagcaa ttgcctattc tccctttaat gaatgctaat cgtgtattag
     2761 tcataaaaga tggagtgaaa caggcagata tttccccttt cggccaggta aaattatcag
     2821 agttacgttt gggcttgggg cataaaaaag gaaactaatt atgctgattg tcttttttcg
     2881 aaaaattttt ctaaccttga ttacgttgat ttttttgtca cttatcagtt ttaatattct
     2941 gttacgagat ccattaaacc acttagccga gttaggctgg tttgaggctt attgttatta
     3001 tgtaaaatct ctgctaaatg gtgattttgg tattagtttc agtaatggag aaccgctcac
     3061 agcgcaaatt ttacaggtgt tcccggctac aattacgctt tgtttatcgg ctctcattgt
     3121 ttctttaatt attggtttgc ctcttggttt ttttgcggct actcagcaaa aaaatatggt
     3181 tgggcgatta ttaaatacac taggttcatt gagtttagcc gtgccggtat tttggctggc
     3241 attagtgcta atgtattacg cttctctcaa tcagtgggaa gtgtcagcaa ttggagaaat
     3301 ccattcgctt tatccgaaac agatggtaac cggctttttg ctattagata tttggttatc
     3361 tgatgtacct tataaattaa aaatgatgca gagtgcttta catcacttag ctttgccgac
     3421 attagtcttg gctgtgccag ctacattaga agttatgcat attactcaag ctagagcagg
     3481 ttatgtaatg aaacaaaatt acattaaaat agcgaaaacg cgtggctgga caccgtttag
     3541 agtttggaga acgcatatta tttgtaatac tttacctgca ttattaccta tgattgcccg
     3601 tacctttatt ttaatttttg ccttcggtat gttaattgag aacatattta gctggggagg
     3661 aattggacgt tggctgataa atgcccttgc tattcaagac tataatgcga tttcagcggg
     3721 agtagttgca atcggggtgt ttgtgttatt agtagatatg gttacaggct ttgtgcgggt
     3781 gatgttagac ccatcagata aaaaggattg gtatggcagt tattaaagaa cccgagcaat
     3841 ttagagaaac caacgcattt aaggcatttt ggtttcattt ccgacaagat aaacttgcac
     3901 ttggcagttt ttatcttttt ttgctattac tggctctcat ttttgttggt agtttgcttg
     3961 ctccttacaa ttataatgaa caatttgttg gtttagaatt aatgcctccc tcttgggacg
     4021 acaaaggtca aatcagccat tttttaggca ctgacgattt aggacgggat attttaagcc
     4081 gtattatgta tggtttttac tacacgcttg gttccgcact gatgattacc ttattaattg
     4141 cgattatcgg cggtatgatc gggatttatg ccgggctgaa aaaaggacgt tcattttggt
     4201 tgattagcca tttgttcgat acctttttat ttatgccgat tttattgatt gcgatcatca
     4261 ttgcaacctt aatggaagcg agtttggtca atgcaatgtt ggcgattttc ttagcgatgt
     4321 tgccgcattt tatccataaa atttatcaag caaccgaaaa acaactcaaa aaagagtaca
     4381 tcattacctt aaagctagac ggtgcaagct gctggtattt aattcgagaa gtgattattc
     4441 ctaatcttac cggcgtggca attaaagcac tttcacatat ttttgtgatc gccatattag
     4501 atattagtgc gttaagtttt attatgctgg gggctaaaag cccgacccct gaatggggag
     4561 cgatgattcg tgaatccatg gaactgattt atatagctcc ttggacggtg atattacctg
     4621 gcttagcaat tatttttagt atttttaccg ttacaatact tggtacacgc ttaagcgtga
     4681 tttttgaaaa ataccgtaaa gaatagtatt taaataggat actgacacat aacaagcggt
     4741 catttttaag taaaatttta cagattaagg aatagtatgg cattacttga tattcgccat
     4801 ttaagtattg aaattgatat gccaaaaggc agagtaaaaa tggtggataa catcaacctg
     4861 actgttgatg agggcgaaat ttgtggcttg gtgggagaat ctggttcggg aaaaagcctc
     4921 atagccaaag tgatttgcgg tatgattaaa gatgaatgga ttgtgagtgc agatcgcttt
     4981 cgctttgacg atattgaatt actgaaactt tcgccagcgg aacgccgaaa attggtaggc
     5041 gatcatattt caatggtatt ccaagatccg cttactagcc ttgacccaag ccagcaaatt
     5101 ggtaaacaac tgatgcaaac cattcaattt agagggaagt ggtggcaacg atttgggtgg
     5161 aaaaagaaaa aagcaatcga gctactacac cgtgttggta ttcgtgatca tcaagatatt
     5221 atgaaaagtt acccaagcga tattaccgaa ggcgaagctc agaaagtgat gattgcaatg
     5281 gcggtggcaa atcagccccg attattggtg gcagatgagc cgactaatat tatggaatca
     5341 accacgcagt tgcaggttta tcgcttgctt tccagtatga atcagaattt gggaacctca
     5401 atcttgctgg tgagtaatga catgcgtagc attcaaaatt gggttgattc ttacaatgtg
     5461 ctttattgtg gacaaaccgt tgaaattgcg gataaagaga gcattcttga atcgtcttac
     5521 cacccctata ctcgagtgtt actcaatagt tcgccggact tttctcagcc tttagccttt
     5581 aaaagtagct taaatacgct acgaggctca gtcccgatgt tacaagaaat gccgattggt
     5641 tgtcgtttag gccctcgttg cccttttgca caaaaaaaat gtatcaacaa accgccatta
     5701 gtgaaagtaa aacagcacga gtttgcctgc cattttccga ttaactttag agaacaaaat
     5761 ttgcttaaaa ataaaacgga aaatacgccg tttgtggtgg ctgaaatagc ggaaaaagag
     5821 gcgttttaat gtggttatta ttggctaagt gtaacgggta acattaaagt atctaatacg
     5881 aaactcaagg gtaaatcgat caccgcaagc accgcgaata taccgccttc ttgcattact
     5941 tggaaatctt ttattacgcc ggcataaaca cggtaatcct gttcaaccaa gcttagtact
     6001 gtgccacaag cggtgaggtt aaacatcaaa tagagtagaa aaacgagttt acaagcggtc
     6061 aatttcatca aaaaatctcc aaatacgctt ttattttacg ctatttttat cgggttggcg
     6121 taaaattcgt tttaaaaaca gctattttca ggcagaatgt agccgaatcg acattaaata
     6181 tactaagagg atcttatatg caaacttaca acattgcagt gcttgccggt gacggcattg
     6241 ggccggaagt gatggcagaa gctatcaaag tgcttgaagc gactcaacaa aaatttggct
     6301 ttaaactaaa ttttaatcaa tataacattg gtggagcagc gattgatgct caaggtaaag
     6361 cgttacccga aaatacctta aaaggctgtg aagaggcaga tgcgattttg tttggctcgg
     6421 taggtggccc gaaatggacg catttactac ctgatgagca acctgaacga ggttcgctat
     6481 taccactgcg taaacatttc tcgctattct gtaatttacg ccctgctgca ttgtatcaag
     6541 ggctggaaaa attctgccca ttacgtgccg atattgctgc taaaggtttt gatatggtgg
     6601 tggtgcgtga attaaccggc gggatttatt ttggacagcc gaaaggccgt gatggtgaag
     6661 gtgcgcaaac gagagcgttt gacaccgaag tatactacaa atatgaaatc gagcgtatta
     6721 cccgtgtggc gtttgaatct gcaatgaaac gtaaaaaaca cgtaacctct gtggataaag
     6781 ccaatgtgtt acaaagctcg attttatggc gtgaaaccgt cacggaagta gctaaagagt
     6841 tcccagaagt cacgcttgag catatgtata ttgataatgc gacaatgcag ctaatcaaag
     6901 cacctgaatc gttcgatatt ttattatgct caaacatctt cggcgatatt atttccgatg
     6961 aggctgcaat gattacaggt tctatgggca tgttgccttc agccagcctc aatgagcaag
     7021 gtttcggctt atatgaaccg gcaggcggtt cagcaccgga tattgccggt aaaaatattg
     7081 cgaatccgat tgcgcaaatt ttatcagccg caatgatgtt gcgttatagc tttaacttag
     7141 gtgatgctgc tgatgcgatt gaaacagcga tccaaaaagc ccttgctgat ggctaccgta
     7201 ccgctgattt agctgatgac agcaaaccgc tttctacctc agaaatgggc gatattattg
     7261 cgaaaaatat tctcgcttaa ggctagaagt taaatagcac aagcggtcat tattcgccaa
     7321 atttttgcaa attttccgct aataatgacc gcttgtttat tactcgttag ccgtcaatct
     7381 cttcgcctgt ttcttcccac ttaaaattca atgccgcaga gttgaggcaa aaacgcaacc
     7441 ctgttggtgg tgggccgtcc ggaaaaacgt gtcccatatg cgaatcacaa ttcccacaac
     7501 gaatttcgat acgatgacgt cctaaactgt aatcatctaa gtaacgtagt gacgattctg
     7561 aaatcgtttg gtaaaaactt ggccagccac aaccggcatc aaatttagta tctgagtgaa
     7621 ataaatcgtt atggcatctg gcacaacgat aaattcctac ccgatgttca ttcaaaaatt
     7681 ttccggtaaa cggacgttcc gtaccgtggt tgattaaaat atcaacttgt tgttctgtca
     7741 gggcgtgaat aggtttaatc atcagcaatt ctcctaagat agtagcgaag tcattgtagc
     7801 tttttttgac ctgaaaatcg ttataaattt caaaatttga catagatcac aaaaaattta
     7861 tctgttatat tggaagggtt cttttggctt gtcaggaaag tgaaaagatg tgctataatt
     7921 caagcatctt tagtgtagta cataaagaac aaattttgtt taactttaat ataggtagaa
     7981 aaatctatgg caattaaaat tggtattaac ggctttggcc gtatcggtcg tatcgttttc
     8041 cgtgcagcac aacaccgtga tgacatcgaa gtggtaggta tcaacgactt aatcgatgtt
     8101 gattatatgg cttatatgct gaaatatgat tcaactcacg gtcgttttga cggtactgtt
     8161 gaagttaaag acggtcaatt agtagttaac ggtaaagcga tccgcgtaac agctgagcgt
     8221 gacccggcta acttaaaatg gaatgagatc ggtgttgata tcgcagttga agcaacaggt
     8281 ttattcttag atgatgaaac tgctcgcaaa cacatcaccg caggtgcgaa gaaagttgtt
     8341 ttaaccggtc cgtctaaaga tgcaacacct atgttcgtaa acggcgtaaa ctttgatact
     8401 tacgcaggtc aagacatcgt gtctaacgct tcttgtacaa ctaactgttt agcaccatta
     8461 gcgaaagtta ttcacgaaaa attcggtatc aaagaaggtt taatgacaac tgttcacgca
     8521 actactgcaa cgcaaaaaac agtagatggt ccatcagcga aagactggcg tggtggtcgt
     8581 ggcgcgtcac aaaacatcat tccttcatca acaggtgcag cgaaagcagt aggtaaggta
     8641 ttacctgcat taaacggtaa attaaccggt atggctttcc gtgttccaac cactaacgtt
     8701 tctgttgttg atttaactgt aaacttagaa aaaccagcaa cttatgcaga aatctgtgct
     8761 gaaatcaaac gtgcttcaga aaacgaaatg aaaggcgtat taggctacac agaagatgca
     8821 gttgtttcaa cagacttcaa tggtgcaact gaaacttcag tatttgatgc agcagcaggt
     8881 atcgcattaa ctgatacttt cgttaaatta gtatcttggt acgataacga agttggctac
     8941 tcaaacaaag tattagactt agttgctcac gtatataact acaaaggtta attgctaagt
     9001 tatattttaa atatagagcc aaattctgaa cggaatttgg ctcttttgct gcgaacaata
     9061 aattgaatat agtcgcgttt tcccataaaa tcaatttcct acaaacagga actaagcaca
     9121 gtaaggcaga ttttcttgct ctttgca
//
LOCUS       DANLXD010000096         9117 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.096, whole genome shotgun sequence.
ACCESSION   DANLXD010000096 DANLXD010000000
VERSION     DANLXD010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9117)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9117)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9117
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.096"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(106..181)
                     /locus_tag="PXD18_002031"
     tRNA            complement(106..181)
                     /locus_tag="PXD18_002031"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(146..148),aa:Asn,seq:gtt)
     gene            complement(187..262)
                     /locus_tag="PXD18_002032"
     tRNA            complement(187..262)
                     /locus_tag="PXD18_002032"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(227..229),aa:Phe,seq:gaa)
     gene            complement(394..1485)
                     /gene="mltC"
                     /locus_tag="PXD18_002033"
     CDS             complement(394..1485)
                     /gene="mltC"
                     /locus_tag="PXD18_002033"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltC"
                     /protein_id="HDL6302424.1"
                     /translation="MKKYAKYLPMLAIIPFLIACGSNKSTKKPKSTRVDYSKDTNGLD
                     ILAGQFSHNIDDIWGSNELLVASKKDYVKYTDKFYTRSHISFEEGVITIETLGNQNHL
                     RNSIIHTLLMGRDPKGIDLFASGDAPISSNPFLNGQVEDQFGRNITNVAIANDFATYL
                     LQNKVQTRRLKNGQTVSFVTIKMVAGHIEVRARQYLPLVRKMAKQYGIEPSLILGIME
                     VESAFNPYAISYANAIGLMQVVPRTAGRDIFARKGMGGQPSREYLYNPSNNIDAGTLY
                     LTILRDEYLDGIEDPVAKRYAMISAYNSGAGAVLRVFDSDRYSAIDRINDLSSDAVYR
                     ILTTAHPSSQARNYLRKVTTAREKYRNIR"
     gene            complement(1502..1771)
                     /locus_tag="PXD18_002034"
     CDS             complement(1502..1771)
                     /locus_tag="PXD18_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HDL6302425.1"
                     /translation="MARTVFCEYLKQEAEGLDFQLYPGELGKRIFDSISKQAWSEWIK
                     KQTMIVNEKKLSMMNPEHRKLLEQEMVNFLFEGKEIIIEGYKPVE"
     gene            complement(1775..2920)
                     /gene="mutY"
                     /locus_tag="PXD18_002035"
     CDS             complement(1775..2920)
                     /gene="mutY"
                     /locus_tag="PXD18_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HDL6302426.1"
                     /translation="MNSNSPFPLAKAKASDPFAKAVLAWFEQYGRKHLPWQQNKTLYQ
                     VWLSEVMLQQTQVATVIPYFARFMERFPTVIDLANASIDEVLHLWTGLGYYARARNLH
                     KAAIQIRDEFGGEFPTRFDDVLALTGVGRSTAGAILSSVLDAPHPILDGNVKRVLSRY
                     FAVEGWAGEKAVENRLWQLSESVTPDTQVADFNQAMMDLGAMICTRTKPKCLLCPLQE
                     NCKTNAMQAWDSFPAKKPKKTLPERQTYFLVLKSGSKVLLQKREAKGIWGGLFVFPQF
                     ESLEALKRSDFMQNLQISQQLTAFRHTFSHFHLDITPVLVETDLKKTSENSPLVVEEK
                     AGNYLSKVSSNADYWYDLHQHNEVGLATPVKRILDELAFSVKNEIKD"
     gene            3004..3396
                     /locus_tag="PXD18_002036"
     CDS             3004..3396
                     /locus_tag="PXD18_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDL6302427.1"
                     /translation="MKSPILGFHHIALIVSDYEKSKHFYTRILGAEIIAETYREQRAS
                     YKLDLRFKDGSQIELFSFPETPPRFTSPETCGLRHLAFRVENIEYAIAFLEQHQLPHE
                     GIRIDEITGKRFTFFRDPDDLPLEFYEV"
     gene            3397..4266
                     /locus_tag="PXD18_002037"
     CDS             3397..4266
                     /locus_tag="PXD18_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDL6302428.1"
                     /translation="MLYLLIATLIWASSFIVGKVAISAFDPVQIMQIRLTLAAFIALP
                     FFIPAYKKIQKNQHIKVWLISFLTFPLYVILQFSGLKLTSAASAVALLGLNPLLTVLV
                     GYFCFKKQATRLDFILSLFACLGILIMASGSDDSGSINVLGLLLVTLGSLSFIVGMYL
                     SKEILQSVKVIDLTKIMLVQGAITALPITLLFAENWQLPTSLSAWASVAYLGIICTSL
                     AILLWNKGISQSSPILAGILLALEPVFGLLMALVFLSEQLSLVTWVGIIIVICTALLS
                     VLLPMMKRYKRLI"
     gene            4282..4995
                     /gene="sfsA"
                     /locus_tag="PXD18_002038"
     CDS             4282..4995
                     /gene="sfsA"
                     /locus_tag="PXD18_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HDL6302429.1"
                     /translation="MKFPPLSHGILLRRYKRFLADIQLPNGEQITLHCPNTGAMTGCA
                     NPGDTVWFSTSHNPKRKYAHTWELTQTQAGDFICVNTLRANQLVQEALENQWISELAD
                     YQHILPEQKYGSENSRIDFLLKSDLLPDCFVEVKSTTLLTENGVGMFPDAKTERGQKH
                     LRELTKIAEQGLQAVIFFAILHTGIERFEVAKQIDPKYAELFAQAIAQKVQVLSYKMA
                     ISLENGQPIAATLTKKCEF"
     gene            5056..5577
                     /gene="hslV"
                     /locus_tag="PXD18_002039"
     CDS             5056..5577
                     /gene="hslV"
                     /locus_tag="PXD18_002039"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HDL6302430.1"
                     /translation="MTTIVCVRKDGKVAIGGDGQATLGNCIEKGTVRKVRRLYKDKVV
                     TGFAGSTADAFILRDLFEKKLELHQGHLVKSAVELAKEWRTERALRRLEAMMIVANDS
                     EFLLVSGSGDVIEPEQDVLAIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDI
                     DIYSNYNHVIEEV"
     gene            5834..7159
                     /gene="hslU"
                     /locus_tag="PXD18_002040"
     CDS             5834..7159
                     /gene="hslU"
                     /locus_tag="PXD18_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase ATPase subunit"
                     /protein_id="HDL6302431.1"
                     /translation="MMSMTPREIVSELDAHIIGQKDAKRAVAIALRNRWRRMQLPEDL
                     RQEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD
                     LADVSMKLVRQQAVEKNKMRAQDAAEDRILDVLLPPAKDQWGNVQESDNNSTRQTFRK
                     KLREGQLDDKEIEIDVAAQVSVEIMTPPGMEEMTSQLQSLFEGMSPSKTKKRKMKIKD
                     ALKVMLDEEAAKLVNPEELKQQAIEAVEQHGIVFIDEIDKICKKGEHSGGDVSREGVQ
                     RDLLPIIEGSTVNTKHGMVKTDHILFICSGAFQVARPSDLLPELQGRLPIRVELKSLT
                     KEDFERILTEPNASLTLQYRELMKTEGVEIEFTKDGISRIAESAFRVNEKTENIGARR
                     LHTVLERLMDGISFDASERRGEKIIIDENYVSEALNDVVENEDLSRFIL"
     gene            7235..8113
                     /locus_tag="PXD18_002041"
     CDS             7235..8113
                     /locus_tag="PXD18_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF535 domain-containing protein"
                     /protein_id="HDL6302432.1"
                     /translation="MKNLYKWPAAQSLYPNQGKKSYAGKRFRYRLRSWLHHSKIKQFE
                     QFVTQNPQLIPLLNARPNYSYPVAHRFLDKRFSAKQRLQKITDNLLFLPQKLAHLPPL
                     WEQAVNFGEIIADFELWLNINEHQPMEGFWALELRHRPTNQLVYLLTFGKLDEALLIA
                     VIQGPNFEGSKELVKQLTKSCHGLRPAYLMVETMKALTAVLGYQSLLGIPQKYQNKSR
                     WVQSKRYVVDYDAIFAESGGKPGNYWQLPLELESKKIDEIPSKKRSMYRKRYEMLANL
                     KQTMELMLKTYTGLNG"
     gene            complement(8183..8899)
                     /locus_tag="PXD18_002042"
     CDS             complement(8183..8899)
                     /locus_tag="PXD18_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL6302433.1"
                     /translation="MKKTLLTLLFGCVVTAQAQDIKFVMEPSYPPFEMTEEKGEIIGF
                     DVDIANAICKEMNANCTFHSQPFDSLIQSLKQKQFDAAISGMGITEPRKKQVLFSEPY
                     FPSSAAFIAKKDTDFAKVKTIGVQNGTTYQHYLAKEKKEYNVKSYASYQNAILDVQNG
                     RIDAIFGDVPVLAEMARKHEGLDFVGEKINNPNYFGDGLGIATHLKNQVLVDQFNAAL
                     KTIKENGEYQKIYDKWMGGK"
BASE COUNT         2707 a         1926 c         1836 g         2648 t
ORIGIN      
        1 tagcgttttt gaacgcataa tactaaaaat tgagcaattt cttagtagtt agccggaaag
       61 ctcaaaaaga aaaccctgat gattactcat cagggcttca gaatatggct cctcctgcgg
      121 gactcgaacc tgcgacatat ggattaacag tccaccgttc taccgactga actaaggagg
      181 aattgatggt gcctcgaggc ggaatcgaac caccgacacg gggattttca atcccctgct
      241 ctaccgactg agctatcgag gcaacgtcgt tgcgtggtgc attatgctga tttcagcttg
      301 caacgtcaaa cgtttttttg caaatttaaa aaaaccgctg ctcaaatgtg ctttttttat
      361 acttttcggc taaaaaacag cataattcac acattaacga atattgcgat atttctctct
      421 ggcggtggtt acttttctta aataatttct agcttgagaa gatggatgag cagtggttaa
      481 aattcgataa accgcatcag acgaaagatc gttaattcta tcaatcgcag agtatcggtc
      541 tgaatcaaac actcgtaata ccgcacctgc tccgctattg tatgcagaaa tcattgcata
      601 gcgtttagcc acaggatctt caattccatc taagtattca tcacgcaaaa tagtcaaata
      661 aagcgtacct gcatcaatgt tatttgatgg attataaaga tattcacgac ttggctgccc
      721 tcccatacct ttacgggcaa aaatatcacg cccggcggta cgaggtacaa cctgcattaa
      781 gccaatcgca ttggcatagc tgatggcata agggttgaat gctgattcga cttccataat
      841 ccctaaaatc aaacttggct caataccata ctgcttcgcc attttacgca ccagcggtaa
      901 atattgtctg gcacgtactt caatgtgtcc tgccaccatt ttaatcgtta caaagctcac
      961 agtttgacca tttttcaaac ggcgtgtttg caccttattt tgcaacaaat aagtcgcaaa
     1021 atcattggcg atggcaacat tggtaatatt tcgcccgaat tgatcttcaa cctgtccgtt
     1081 taggaaaggg ttagagctaa tcggtgcatc gcctgaggca aataaatcaa tccctttcgg
     1141 gtctctgccc attaataaag tatgaataat cgaattgcgt agatgattct gattccctaa
     1201 agtctcaatc gtaatcaccc cttcttcaaa cgaaatatgg ctacgggtgt aaaacttatc
     1261 cgtatatttc acataatctt tcttactggc aactaacagc tcgttacttc cccaaatatc
     1321 atcaatattg tgagaaaact gccctgccaa aatatccaaa ccattggtat ctttagaata
     1381 atctactcgg gtagattttg gcttcttagt cgatttattg ctcccacaag caataagaaa
     1441 cggaataatt gccaacatcg gcaaatattt agcatatttt ttcattgtga tttaaccttt
     1501 attattcgac cggcttatag ccttcgatga tgatctcttt accttcaaat aaaaaattga
     1561 ccatctcttg ttcgagcagt ttacggtgtt cggggttcat catactgagt tttttctcat
     1621 tgacgatcat tgtctgtttt ttaatccact cagaccacgc ttgcttgctg attgagtcaa
     1681 aaatacgctt acccagctcc cccggataaa gttgaaaatc taaaccttct gcctcttgtt
     1741 ttaaatattc gcaaaatacg gtacgagcca taatttaatc cttaatctca tttttcacac
     1801 tgaatgccag ctcatctaaa atacgtttaa ccggcgttgc taaacccact tcgttatgtt
     1861 ggtgcaaatc ataccaataa tccgcatttg aagatacctt agaaagataa tttcctgctt
     1921 tttcttcgac aacaagcggt gaattttcac ttgttttttt caaatcggtt tctactaaaa
     1981 ccggggtaat atccaaatga aaatggctaa aagtatgcct aaatgcagtt aattgctgtg
     2041 aaatttgcaa attttgcata aaatcagacc gcttgagagc ctctaagctc tcaaattgcg
     2101 gaaacacaaa taagcccccc caaatgcctt ttgcttcccg tttttgtaac agcactttcg
     2161 agccgctttt cagcactaaa aaataggttt gacgctccgg caaggttttt ttcggtttct
     2221 tggcaggaaa gctatcccac gcttgcattg cattcgtttt acaattttct tgtagcgggc
     2281 agagcaagca cttaggcttt gtacgggtgc aaatcatcgc ccctaaatcc atcatcgctt
     2341 ggttaaagtc tgccacttgg gtatcaggcg tcacactttc gcttaattgc caaaggcgat
     2401 tttccaccgc tttttcaccc gcccagcctt ctactgcaaa atagcggctt aacacccgtt
     2461 tgacattgcc atctaaaatc gggtgtgggg catctaacac agaagacaaa atcgcccctg
     2521 cagtacttct gcccactccg gttaatgcca acacatcatc aaatcgggta ggaaattcac
     2581 cgccaaactc atctcgaatt tgaattgccg ctttatgcaa atttcttgcc cgagcgtaat
     2641 aacccagccc tgtccacaaa tgcaatactt catcaatcga ggcattagct aagtcaatta
     2701 cggtgggaaa tcgttccata aaacgtgcaa aataaggaat aacggtcgct acttgagttt
     2761 gttgcaacat tacctccgac aaccaaacct gatacagcgt tttattttgc tgccaaggta
     2821 aatgtttccg cccatattgc tcaaaccaag ctaaaacagc tttggcaaac ggatcagaag
     2881 cttttgcttt cgctaaagga aatggggaat tgctgttcat taaaaatctt gaaatccgaa
     2941 aaataaatta tcatactgca agcggtcagt tttaccaaaa attttacaca ttaaggaaaa
     3001 aagatgaaat cgcccatttt aggtttccac cacattgcat taattgtttc cgattacgaa
     3061 aaatccaaac atttctacac ccgcatttta ggggcagaga tcatcgcaga aacctaccga
     3121 gagcaacgtg ccagctataa attagattta cgctttaaag atggctcaca aattgaatta
     3181 ttcagttttc ctgaaacgcc gcctcgtttc acctcgcccg aaacctgcgg gcttcgccat
     3241 ttggcatttc gagtggaaaa tattgaatat gccatcgcat ttttagaaca acatcaatta
     3301 ccgcatgaag ggatccgaat tgatgagatc accggcaaac gcttcacgtt tttccgagat
     3361 ccggacgatc tgccgttaga gttttacgag gtctaaatgt tatatttact gattgcaacc
     3421 ctgatttggg cgagttcatt cattgtaggt aaagtggcga tttcagcctt tgaccctgtc
     3481 caaattatgc aaattcggct gacgttagcg gcgtttatcg ctctgccgtt ttttattcct
     3541 gcgtataaaa aaatccagaa aaatcagcac attaaagtct ggctgattag ttttctcact
     3601 tttcctctgt acgtgatctt acaattttcc ggcttgaaat taacttccgc agcaagtgcc
     3661 gtggcactac tcgggctaaa cccgctttta actgtgttag tcggctattt ttgtttcaaa
     3721 aaacaggcaa ccaggctcga ttttatccta agtttatttg cctgcttggg gattttaatt
     3781 atggcatcgg gtagcgatga tagcggttca atcaatgtat taggattatt gcttgtaacc
     3841 ttaggcagtt taagttttat tgtgggaatg tacctcagca aagagattct gcaatcagta
     3901 aaagtgatcg atttaaccaa gatcatgctg gtgcaagggg caattaccgc cttacctatt
     3961 accttactct ttgcagaaaa ttggcaactg ccaaccagtc tctcagcatg ggcgagcgta
     4021 gcatatttag gcattatttg taccagcttg gcaatattgt tatggaacaa aggcatcagc
     4081 caatcttcgc ctattcttgc aggtattcta ctcgcacttg aaccggtatt cggactgcta
     4141 atggcattgg tctttttatc agaacagctc agtttagtga cttgggttgg gattattatt
     4201 gttatttgca ccgccttact ctccgttttg ctaccgatga tgaaaagata caagcggtta
     4261 atttaacagg attttttgca aatgaaattt ccccctcttt cccacggcat tttacttcgc
     4321 cgttataaac gttttcttgc cgatattcag ttgccaaatg gcgaacaaat taccctccat
     4381 tgcccaaata ccggtgcgat gacaggctgt gccaaccccg gtgatacagt ttggttttcc
     4441 acctctcata accccaaacg taaatatgct cacacttggg aactaaccca aacccaagcg
     4501 ggggatttta tttgtgtcaa taccttgaga gccaatcagc ttgtacaaga agccttggaa
     4561 aatcaatgga ttagcgagct tgcggattat cagcacattc tgcctgaaca aaaatatggc
     4621 agtgaaaaca gtcggattga ttttttgctc aaatcggacc ttctgccgga ttgttttgtg
     4681 gaagtgaaat ctaccaccct tttaaccgaa aacggtgtgg gaatgttccc cgatgccaaa
     4741 accgagcggg ggcaaaaaca tttgcgggag ctgacgaaaa tcgctgaaca gggcttacaa
     4801 gcggtcattt ttttcgctat tttgcacaca ggtattgaac ggtttgaagt ggcaaagcag
     4861 atagacccca aatatgccga attattcgct caagccattg cacaaaaagt gcaggttctc
     4921 tcctataaaa tggcaatttc attggaaaac gggcaaccta ttgcggcaac cttaacaaag
     4981 aaatgtgagt tttaagcttg aaaacacaca gcatatcccc atataagcca aagtttttaa
     5041 aaagaaggat ttagtatgac aacgattgta tgcgtgcgta aagacggaaa agtggctatc
     5101 ggtggtgatg gtcaggcaac gcttggaaat tgtatcgaga aaggcacggt gcggaaagtt
     5161 cgccgtttgt ataaagacaa agtggtgaca ggctttgccg gctcgaccgc tgatgccttt
     5221 attttgcgtg atttattcga gaaaaaattg gagttacacc aagggcattt agtgaaatcg
     5281 gcagtggaac tggcaaaaga gtggcgtacc gagcgtgctt tacgccgttt agaagcgatg
     5341 atgattgtcg ccaatgacag cgagttttta ttggtttcag gttcgggcga tgtgattgag
     5401 ccggagcaag atgtgctggc gattggttca ggcggtaact atgcgaaagc cgctgctctt
     5461 gcgttattac gcaccgaaaa taatttatct gcaaaagaaa tcgttgcgga agcgttaaaa
     5521 atcgccggcg atattgatat ttacagtaac tacaatcacg tgattgaaga agtttagtta
     5581 aataactctc tccccttgtg ggacaaatgt ttacatttga acgttggctt tgccaacggc
     5641 tccacaggag cgagcgtagc gagtattgag accgaaaaat atttcgttca gaaatatttt
     5701 tcagagagag gggttaatgc aaaacgttta agaaaaaaga ccgcttgtta ccctctccct
     5761 gatttttctt ctgaacaaag aaaaatctgt ccctctccca caaggggaga gggtaattaa
     5821 tttaaggaat aacattatgt caatgacacc ccgtgaaatc gtctcagaat tagacgcaca
     5881 cattatcgga caaaaagatg caaaacgtgc ggtagcaatt gctttgcgta accgctggag
     5941 aagaatgcag ttgccggaag atctccgcca agaagtgacc cccaaaaata ttttaatgat
     6001 cggtccgacc ggtgtgggta aaaccgaaat cgcccgccgt ttggcgaagc ttgccaatgc
     6061 cccttttatc aaagttgagg caaccaaatt cactgaagtg gggtatgtgg gtaaagaagt
     6121 ggattcgatt atccgtgatc tagctgatgt gtcgatgaaa ttagtccgcc aacaagcggt
     6181 cgaaaaaaat aaaatgcgtg cacaagatgc agcggaagat cgcattttag acgtattatt
     6241 gccaccggcg aaagatcagt ggggaaatgt gcaggaatcc gacaataatt ctacccgcca
     6301 aactttccgc aaaaaattgc gtgaagggca attagacgat aaagagattg aaattgacgt
     6361 ggcagctcaa gtgagcgttg agattatgac cccgccggga atggaagaga tgacctcgca
     6421 attacaatcg ctgtttgagg gaatgtcgcc aagcaaaacc aaaaaacgca aaatgaaaat
     6481 caaagatgcg ttaaaggtga tgcttgatga agaagcggcg aaattagtaa atcctgaaga
     6541 gctgaaacag caagcgattg aagcggtgga acagcacggt attgtcttta ttgatgagat
     6601 cgacaaaatc tgtaaaaaag gcgagcattc gggtggagat gtttctcgtg aaggtgttca
     6661 gcgtgattta cttccaatca ttgaaggctc aacggtaaat accaagcatg gtatggtgaa
     6721 aaccgaccat attctgttta tctgctcggg ggcattccaa gtggctcgcc cgtctgattt
     6781 actcccagaa ttacagggtc gcttgccgat tcgtgtggag ttaaaatcgc ttaccaaaga
     6841 agattttgag cgtattttaa ccgaaccgaa tgcctcatta accttgcaat atcgtgagtt
     6901 gatgaaaact gaaggcgtgg agattgagtt cactaaagac ggtatcagcc gtattgcaga
     6961 aagtgcattc cgtgtgaacg agaaaaccga aaacatcggg gcaagacgtt tacacaccgt
     7021 gcttgagcgt ttgatggacg gcatttcgtt cgatgccagc gaacgccgtg gtgaaaaaat
     7081 catcattgat gaaaactatg tttccgaagc gttaaatgac gtggtggaaa acgaagattt
     7141 aagtcgcttt attttgtagt tttaagttat acaagcggtt attttagcga aaaatcttgc
     7201 gaattagccg cttttcatat tgttagttgt aaaaatgaaa aatctataca aatggcctgc
     7261 tgcacaatcg ctttatccaa atcagggaaa gaagtcttac gcagggaaac gttttcgtta
     7321 ccgtcttcgc tcttggttgc atcattccaa aatcaagcaa tttgagcagt tcgttacaca
     7381 aaatccacaa ctgattccgc tcttaaatgc tcgaccaaat tacagctacc ccgtggctca
     7441 ccgcttttta gataagcgtt tcagtgcaaa acaacgctta caaaaaatca cagataacct
     7501 gctgttttta ccgcaaaaat tggctcattt accacctcta tgggaacaag cggtcaattt
     7561 tggtgaaatt attgcagatt ttgagttatg gcttaacatc aatgaacatc agccgatgga
     7621 aggtttttgg gcattagaac ttcgccacag accgactaat cagctagttt atttattaac
     7681 atttggtaag ttagatgaag ccttgttgat agccgtaatt caaggtccga attttgaagg
     7741 ttcaaaagag ctggtgaaac aattaaccaa aagttgccac ggcttacgcc cggcctattt
     7801 aatggttgaa acgatgaagg ctttaacggc tgttcttggc tatcagagtt tactaggcat
     7861 tccacagaaa taccagaata aatcccgctg ggtgcaaagt aagcgctatg tagtggatta
     7921 tgatgctatt tttgcggaat cgggcggaaa gccgggaaat tattggcagt taccccttga
     7981 attggaaagt aaaaaaatag atgaaattcc aagcaaaaaa cgctcaatgt atcgcaagcg
     8041 ttatgaaatg ctagctaatt taaagcagac catggagctt atgcttaaaa cttatactgg
     8101 cttaaatggg taaatcaaag aatacaagcg gtcaaaatct gcaaaacttt gcaaaacttt
     8161 gcaaaaaatg accgcttaca agttacttgc cgcccatcca tttatcatag attttttgat
     8221 attcgccatt ctctttaatc gtttttaatg ctgcattgaa ttgatcaact aatacttggt
     8281 ttttcaagtg agttgcaatg cctaaaccat caccaaaata gtttggatta ttgattttct
     8341 cccctacaaa atctagccct tcgtgttttc ttgccatctc agccaatacc ggcacatcgc
     8401 caaaaatagc atcaattcgc ccattttgca catctaaaat agcattttga taagaggcat
     8461 aagatttcac attgtactct tttttctctt ttgctaaata gtgttggtaa gtagtcccat
     8521 tttgcacacc aatcgttttc accttagcaa aatctgtatc ttttttcgca atgaaggcag
     8581 cagagcttgg aaagtaaggc tcgctaaata atacttgttt cttacgtggt tccgtaatac
     8641 ccatacctga aattgcagca tcaaattgtt tttgttttag gctttggatt aagctatcaa
     8701 aaggttggct atggaatgta caatttgcat tcatctcttt acagatagca tttgcaatat
     8761 ccacatcaaa accgataatt tctcccttct cttcggtcat ttcaaatgga ggatagcttg
     8821 gctccatcac aaatttgata tcttgtgcct gcgcagtaac cacacacccg aataaaaggg
     8881 tcaaaagtgt ttttttcata aaaagtccct gtgttttcat tataaggatt accactttaa
     8941 cgcagttact ttcttaaaaa aagtcttctt ttcataaagt ttgttttatg tcatacaaac
     9001 acatcaaatt gagatgtagt ttctcaatcc tcttgattcc tctatctcaa aaaaacaacc
     9061 caaaagaaaa aagaaaagta tatgttacat taatattaca atgtaattat tttgttt
//
LOCUS       DANLXD010000097         9037 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.097, whole genome shotgun sequence.
ACCESSION   DANLXD010000097 DANLXD010000000
VERSION     DANLXD010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9037)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9037)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9037
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.097"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            214..3285
                     /gene="fdnG"
                     /locus_tag="PXD18_002043"
     CDS             214..3285
                     /gene="fdnG"
                     /locus_tag="PXD18_002043"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014550636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:799..801,aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HDL6302434.1"
                     /translation="MQISRRKFFKVCAGGMAGTSAAMLGFAPATALAAPREYKLLRAK
                     ETRQTCTYCAVGCGMIMYSLGGEAMNSKGKLIHIEGDSDHPVSRGALCPKGAGALDYV
                     NSDRRVHYPEVREAGSSEWKRISWHEAIERIARHMKNDRDENFVTHNEAGLEVNRWMT
                     AGFLAGSACSNETGIVTQKFIRSLGMIFTDNQASIUHGPTVASLAPSFGRGAMTNHWV
                     DIKNSDLVIVMGGNAAEAHPVGFRWAVEAKKQNGAKLMVVDPRFNRSAAVADIYIPLR
                     PGTDIAFLLGAVNYLLKNDKIQHEYVKHYTNATFLLNEGFKFEDGLFTGYDEATRTYK
                     DKSTWAYQLDEQGQPKRDMTMQDPRCVINMLKDHVSRYTPEMVERITGTPQKDFLIFC
                     EEIAKTSAPDKAATFLYALGWTQHTVGAQNIRSMAIIQLLCGNIGVSGGGVNALRGHS
                     NVQGITDLGLFPHMLPGYIRLPTEADATLESYLNAIAPKTLVAGQVNYGQNNPKFAVS
                     MLKTFYGDKATKENEFGYHYLPKYPKGGTDHFRFIEQMYQGKVNGYFCQGMNPIASYP
                     NSQKLIKALSNLKYLVIFDPLITDTSEFWKNHGEFNNVNPSEIQTEVFRLPTTCFAEE
                     DGSIANSGRWLQWHWKAADAPHEAKPDVDILSEIRAELIHLYHKEGGKAPLEPLEAMT
                     WNYMNPLEPKPEEIAKENNGYALEDLKDADGNIIVKKGELLSSFTQMRDDGTTSGGCW
                     IYCGQWTPKGNQMANRDNSDPSGLGNTLGWAFSWPVNRRILYNRASADLSGKPWNPKR
                     QLVKWNGKNWNYVDVADYGTAPPNSPVTPFIMQPEGVSGLFVRERMQDGPFPEHYEPF
                     ETPIGTNPLHPNVISSPVARILPSDKEDLGTSDEFPYVGTTYRLTEHFHYWTKNALIN
                     VIAQPEQFVEIGEKLAEEKGIKNGDKVRVWSKRGEIKAVAVVTKRIRSLVSDGKPIHT
                     IGVPIHWGFAATTGAKKGYFANNLTVRTGEPNSNTPESKCMLLNIEKIVGA"
     gene            3288..4202
                     /gene="fdxH"
                     /locus_tag="PXD18_002044"
     CDS             3288..4202
                     /gene="fdxH"
                     /locus_tag="PXD18_002044"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HDL6302435.1"
                     /translation="MSTVQTQNIIKISATSALTPAPQARSHQVEVAKLIDVTTCIGCK
                     ACQVGCSEWNDIRSDVNANCVGVYDNPADLNAKAWTVMRFNEVEENDRLEWLIRKDGC
                     MHCAEPGCLKSCPSPGAIIQYANGIVDFQSDKCIGCGYCIAGCPFNIPRMNPDDNRVY
                     KCTLCVDRVNVGQEPACVKTCPTGAIRFGSKEEMKFYAEQRIADLKSRGYENAGLYDP
                     EGVGGTHVMYVLHHADKPELYSGLPKDPKIDTTVTLWKDVLKPVAAVALGGLALAEVA
                     HYITVGPNVEEDLEEHHHSENAEGGKHE"
     gene            4195..4872
                     /locus_tag="PXD18_002045"
     CDS             4195..4872
                     /locus_tag="PXD18_002045"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HDL6302436.1"
                     /translation="MSKKFEITNDTKIVRHKPLARVSHWFLVISFFMTMFTGVAFFFP
                     DFAWLTEILGTPQIARAVHPFTGIIMFIAFIIMALIYWHHNIPEKNDIRWAKGIVEVL
                     KGNEHKVSDNGKYNLGQKLLFWTLILAMFTLLATGIIMWRQFFSHYFSIPMLRIAILL
                     HSASAFMLFTGILVHMYMAFWVKGSIRGMVEGWVTVRWAKKHHPRWYREEVLPELERQ
                     VAEQNNK"
     gene            4928..5845
                     /gene="fdhE"
                     /locus_tag="PXD18_002046"
     CDS             4928..5845
                     /gene="fdhE"
                     /locus_tag="PXD18_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HDL6302437.1"
                     /translation="MSIKILPQDDIKQAASSFQQPELLFANPKNLYLRRAKRLRELAK
                     QNPFGEYMEFSANLVDIQLALLESQPIADYSQKITACVERTQGETPLNAQNFQRTDEW
                     RTLLLAIIEKFKPYANDTVLATIEVLEKAAKSELDTLADNLLNERYELVGADKAVFIW
                     AALSLYWVQLAQQLPRNSRAEIGHKHLCPVCNSAPVSSVIHFGEAQGLRYLHCSLCES
                     EWHVVRTKCTNCDETGKLDYWSLDTVEAAVKAESCGDCHSYLKVLYQDKDVNVEPVAD
                     DLATLFLDSEMEQKGLSRSGINPFLFQVE"
     gene            complement(5915..6301)
                     /locus_tag="PXD18_002047"
     CDS             complement(5915..6301)
                     /locus_tag="PXD18_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302438.1"
                     /translation="MLRNFMIMLHFIYGFAMKNAFSFFVISLFLTMNSISYASNPIPS
                     NKEKLNGVKKQQDKPKFRISERKVLKNKEKDEEVSNFSMEELRVGAQRPLDDSVIQYF
                     KSQCRYAFMSDREIIANRCEVKKIAD"
     gene            complement(6312..7682)
                     /gene="gorA"
                     /locus_tag="PXD18_002048"
     CDS             complement(6312..7682)
                     /gene="gorA"
                     /locus_tag="PXD18_002048"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009499791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HDL6302439.1"
                     /translation="MAKHYDYIAIGGGSGGIASINRAASYGQKCAIIEAKHLGGTCVN
                     VGCVPKKVMFYGAQVAEAINHYAPDYGFDITVNNFDYAKLVESRQAYIGRIHTSYGNV
                     LAKNNVDVLNGFARFKDAKTLEVSYADGSVEEVTADHILIATGGRPTVPNVKGAEYGI
                     TSDGVFALDALPKSVAIVGAGYIAVELAGVFNSLGVNTHLFVRQHAPMRNQDPLIVDT
                     LLEVLAQDGIELHTQATPQEVVKNADGSLTLKLQDGRETSVESLVWAIGREPATDKIN
                     LEAAGVETNERGFIKVDKFQNTNVPNIYAVGDIIEGGIELTPVAVAAGRRLSERLFNN
                     KPNEHLDYSLVPTVVFSHPPIGTVGLSEPKAIEQYGAENVKVYKSSFTAMYTAVTQHR
                     QPCRMKLVCVGEGEKVVGLHGIGFGVDEMIQGFAVAIKMGATKADFDNTVAIHPTGSE
                     EFVTMR"
     gene            complement(7759..8283)
                     /locus_tag="PXD18_002049"
     CDS             complement(7759..8283)
                     /locus_tag="PXD18_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HDL6302440.1"
                     /translation="MHSELNTRANILGKIIFASRWLQLPIYLGLIVVQGIYAYKFIKS
                     LYHLVINLNEMDSNTVMLAVLNLIDVVMIANLLVMVIVGGYETFVSRLKVDDHPDQPE
                     WLDHVNATILKVKLSMAIISISSIHLLQTFINASNLDEKQMMWQVVIHLAFIVSALAM
                     AYIDKMLNSGHMKH"
     gene            complement(8378..9016)
                     /locus_tag="PXD18_002050"
     CDS             complement(8378..9016)
                     /locus_tag="PXD18_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HDL6302441.1"
                     /translation="MELKHTIEQRKTIKAFNSTIKISRTELEEMVALSQLAPSKANLQ
                     PWRFVIIDVEILKAALSKNVAFNGPPCETASAIVVILADLQYEKLLGAIVDQSVETGC
                     LHKEFRERKFDFLLNLHNQATQAEIRDQVLIDTSLAAMQLMLIAKDKGYDTHAIGVFE
                     RPAVLKLLNIDAERYLPVMLLAIGKAANPALPSCRLPLEYTVSWNDGQGFKI"
BASE COUNT         2763 a         1937 c         1801 g         2536 t
ORIGIN      
        1 aaaaagtagt ttattttgtt aaaaagttgt atcattaaat tgtttaaatt tggtttacat
       61 caaattaatt taagatttta tctatttacc aaaaaaagag tatgttcatt ttcttttatt
      121 agggggaaaa tgatacacct cttagatcaa tttattaaat taattttgat caaattttgt
      181 tttatttctc acattatgtg atttggagtg attatgcaga tctcaagacg taagttcttc
      241 aaggtctgtg caggtggtat ggcgggaact tctgctgcaa tgttgggttt tgctccagca
      301 acagcattag ctgcaccgcg tgagtataag ctcttaagag caaaagaaac tcgacaaacc
      361 tgtacttact gcgcggtagg ctgtggcatg attatgtaca gcttaggcgg cgaagcaatg
      421 aacagcaaag gaaagttaat tcatattgag ggtgattctg accatccagt aagccgtggg
      481 gcgttatgtc cgaaaggtgc aggggcgttg gactatgtta atagtgaccg ccgtgtgcat
      541 tatccggaag tgcgtgaagc cggttcaagt gagtggaaac gcatttcttg gcacgaggca
      601 attgaacgta ttgcccgcca tatgaaaaat gaccgtgatg agaacttcgt cacccacaat
      661 gaagcagggc tggaagtaaa ccgttggatg acggcaggtt tcttggcagg ctcggcgtgt
      721 agtaacgaaa ccggtatcgt cacccagaag tttatccgct ctctcggtat gatttttacc
      781 gacaaccaag cgagtatctg acacggacca acggtagcaa gtcttgctcc atcatttggt
      841 cgcggtgcga tgaccaacca ctgggttgat attaaaaact ccgatttagt gatcgttatg
      901 ggcggtaacg cagccgaagc tcaccctgtg ggtttccgtt gggcagttga agcgaaaaaa
      961 cagaacggtg cgaagttaat ggtggtagat ccacgcttta accgtagtgc tgcggtggcg
     1021 gatatttata taccattgcg tccgggtacg gacattgcgt tcttgttagg tgcggtaaac
     1081 tacctgctta aaaacgacaa aattcaacac gagtatgtga agcattacac caatgccaca
     1141 ttcttactca acgaagggtt taaattcgaa gacgggcttt tcaccggcta cgatgaagcc
     1201 actcgtacct ataaagacaa atccacttgg gcttatcagt tagatgaaca gggtcagccg
     1261 aaacgggata tgacaatgca agatccacgt tgtgtgatca atatgctcaa agaccacgtt
     1321 tcccgctata cgcctgaaat ggtagaacgc attaccggta cgccacaaaa agatttcctg
     1381 attttctgtg aagagattgc gaaaacctca gcgccggata aagccgccac cttcctctat
     1441 gccttaggtt ggacacaaca caccgtgggc gcacaaaaca ttcgctcaat ggcgatcatt
     1501 cagttgctgt gcggtaacat tggtgtctcc ggcggtgggg taaacgcact gcgtggtcac
     1561 tctaatgtac aagggattac cgacctaggc ttgttcccac atatgttgcc gggctatatc
     1621 cgcctgccaa ccgaagcgga cgcaacctta gaaagctact taaatgcgat tgcaccgaaa
     1681 accttagtgg cagggcaagt aaactacggg caaaacaacc cgaaattcgc tgtgagtatg
     1741 ctcaaaacct tctacggcga taaggcaacc aaagagaacg agttcggcta tcactattta
     1801 ccgaaatacc cgaaaggcgg tacagatcac ttccgcttta tcgaacagat gtatcaaggc
     1861 aaagtgaacg gctatttctg ccaaggtatg aacccgattg cctcttaccc taactcgcag
     1921 aagttaatta aagcgttgag caatttgaaa tatttagtca tttttgaccc gcttattacc
     1981 gatacttccg agttctggaa aaatcacggt gagttcaaca atgtgaaccc gtctgaaatt
     2041 caaaccgaag tgttccgctt gccgaccact tgctttgcgg aagaagatgg ttcaattgcg
     2101 aactccggtc gctggttaca atggcactgg aaagcagcag acgcaccaca cgaggcaaaa
     2161 ccggacgtgg atattctgtc tgaaatccgt gccgaactga tccaccttta tcataaagaa
     2221 ggcggaaaag caccgcttga accgttagaa gcgatgacgt ggaactatat gaacccgtta
     2281 gaaccgaagc cggaagagat cgccaaagag aacaacggtt atgcattgga agatctgaaa
     2341 gatgcagacg gcaacatcat cgtgaaaaaa ggcgaactat tatccagctt tacacaaatg
     2401 cgtgatgacg gtacaacctc cggtggttgt tggatctact gcggtcaatg gactccgaaa
     2461 ggtaaccaaa tggcgaaccg tgataactcc gacccatcag gcttaggtaa caccttaggc
     2521 tgggcattct cgtggccggt aaaccgccgt attctataca accgtgcatc ggcagattta
     2581 agcggtaaac cgtggaaccc gaaacgccag ctagttaaat ggaacggtaa aaactggaac
     2641 tatgtggacg ttgccgatta cggtacagca ccaccaaata gccctgtgac accatttatt
     2701 atgcaaccgg aaggggtatc cggcttgttc gtgcgtgaac gtatgcaaga cggtccattc
     2761 cctgagcatt atgaaccgtt tgaaacgcca atcggcacga acccgttaca cccgaatgta
     2821 atcagcagtc cggtggcacg cattctgccg agcgataaag aggatttagg caccagcgat
     2881 gagttcccat atgtcggtac aacttaccgc ttaaccgaac acttccacta ctggacgaaa
     2941 aatgccctga ttaacgtcat tgctcaaccg gagcaattcg tggaaatcgg cgagaaactt
     3001 gccgaagaga aaggcattaa aaatggcgac aaagtacgtg tttggtctaa acgtggcgaa
     3061 attaaagccg ttgccgtggt gactaaacgt atccgttcat tggtctctga cggcaaacca
     3121 atccacacta tcggtgtgcc gatccactgg ggctttgcgg ctacaaccgg tgcgaaaaaa
     3181 ggctattttg ccaataactt aaccgtgcga acaggtgaac caaactcaaa tacacctgaa
     3241 tcgaaatgta tgttattaaa cattgagaaa attgtggggg cttaacaatg agtacagttc
     3301 aaactcaaaa cattattaaa atctccgcaa cctcggcgct gacaccggcg ccgcaggctc
     3361 gttcgcacca agtggaagta gcgaaactga tcgatgtcac cacttgtatc ggctgtaaag
     3421 cctgtcaagt gggctgttca gaatggaatg acattcgctc cgatgtaaat gcaaactgtg
     3481 tcggcgtgta cgacaaccct gcggatctaa atgcgaaagc gtggacagta atgcgcttta
     3541 acgaagtaga agaaaacgac cgtttagaat ggttgatccg taaagacggc tgtatgcact
     3601 gtgccgagcc gggttgcttg aaatcttgcc cgtcaccggg tgcgattatc caatacgcca
     3661 acggtattgt tgatttccaa tccgacaaat gtatcggttg tggctactgt atcgcaggtt
     3721 gtccgttcaa cattcctcgt atgaatccgg acgataaccg tgtttacaaa tgcaccctgt
     3781 gtgtggatcg tgtcaatgtt ggtcaagaac cggcttgcgt gaaaacctgc ccgaccggtg
     3841 caatccgctt cggtagcaaa gaagagatga agttctatgc agaacaacgc attgctgatc
     3901 tgaaatctcg tggctatgaa aatgccggct tgtacgaccc tgaaggcgtt ggcggtacgc
     3961 acgtaatgta tgtattacat catgccgaca aaccggagct ttattcaggc ttaccgaaag
     4021 atccgaagat tgataccaca gtaaccttat ggaaagacgt tttaaaacct gtggcggcag
     4081 tagcgttggg tggtttagct ttagcagaag ttgcacacta tattaccgtt gggccaaacg
     4141 ttgaggaaga tcttgaagaa caccaccata gcgaaaatgc agaaggaggc aaacatgagt
     4201 aagaaatttg aaatcacgaa cgataccaaa atcgttcgtc ataagccctt agctcgtgtt
     4261 agccactggt tcttagtaat ctcttttttt atgacgatgt ttaccggtgt tgccttcttc
     4321 ttccctgact ttgcttggct taccgagatt ttaggtactc cacagattgc ccgtgcagtc
     4381 cacccattta ccgggattat aatgtttatt gcatttatta ttatggcgtt aatatattgg
     4441 caccataata tccctgagaa aaatgatatt cgttgggcaa aaggcattgt tgaagtacta
     4501 aaaggtaatg agcataaggt ttccgataat ggaaaataca atttgggtca aaaattactc
     4561 ttttggactc ttattcttgc gatgttcact cttttagcca cagggattat tatgtggaga
     4621 caatttttct ctcactactt ctcgattcct atgctaagaa ttgcaatttt acttcattca
     4681 gcaagtgcat ttatgctatt taccggaatt ttagtacata tgtatatggc attctgggta
     4741 aaaggctcaa tcagaggtat ggttgagggt tgggttaccg ttcgctgggc aaaaaaacac
     4801 cacccaagat ggtaccgtga agaagtgcta cctgaattag aaagacaagt agctgagcaa
     4861 aataataaat aacctcaagt gcggtattat taccgcactt ttattttatt ggtttaaaaa
     4921 gaatattatg agtatcaaaa tactacctca agatgatatc aaacaagcag ctagttcatt
     4981 tcagcaaccc gagctcttat ttgctaatcc caaaaatctg tatttacgcc gcgctaagcg
     5041 gctacgtgaa ttagccaagc aaaacccatt cggtgaatat atggagtttt ctgctaacct
     5101 cgtggacatt caattagcat tacttgaaag ccagccaatt gcagattatt ctcaaaaaat
     5161 aaccgcttgt gtagagcgca cgcaaggaga aacaccgcta aatgcacaga attttcagcg
     5221 tactgatgaa tggcggacac tactcttagc cattattgag aaattcaagc cttatgcaaa
     5281 tgatactgtt cttgcaacaa ttgaagtatt ggaaaaggca gctaagtcag agctagacac
     5341 acttgctgat aatttgctaa atgaacgata cgaacttgtg ggcgcagata aagctgtctt
     5401 tatttgggct gctctctcac tttactgggt acaattagct caacaattac cacgtaattc
     5461 tcgtgcagaa ataggccata aacatttatg tccggtatgt aactcagcac ctgtaagcag
     5521 tgtgattcat ttcggtgaag ctcaagggtt acgttatcta cactgttctt tatgtgaaag
     5581 tgaatggcat gtagtacgta caaagtgtac aaactgtgat gaaaccggca aactggatta
     5641 ttggagctta gatacagtag aagcagcagt taaagctgaa agttgtggcg actgccattc
     5701 ctacttaaaa gtactctatc aagataaaga cgtgaatgtg gaacctgttg ctgatgattt
     5761 agcaactcta ttcttagatt ccgagatgga acaaaaaggt ctttcaagaa gtgggataaa
     5821 tccattttta tttcaagtag agtaactcat ttacaacaaa aacggagcat aacgctccgt
     5881 tttttattac atttaactca tacactatac ttttttaatc agctattttt ttaacttcac
     5941 agcggttagc aataatctcc cgatctgaca taaatgcgta tcggcattga gatttaaaat
     6001 attgaatcac agaatcatca agaggtcgtt gtgctccaac acgtaattcc tccatagaaa
     6061 aattactaac ctcttcatct ttctctttat ttttcaatac cttacgttca gatattctaa
     6121 acttaggctt gtcttgctgt ttttttactc cgtttaattt ttctttatta ctaggaatag
     6181 gattacttgc ataactaata ctattcatcg taagaaaaag agaaataaca aaaaagctaa
     6241 aagcgttttt catagcaaac ccataaataa aatgtagcat aatcataaaa ttacgtaaca
     6301 ttttattaca tttagcgcat ggttacaaat tcttcagatc ctgtcgggtg aatagccact
     6361 gtgttgtcaa aatcagcttt cgttgcgccc attttaattg caacagcaaa accttgaatc
     6421 atttcatcaa caccaaaacc aataccatgt aacccaacca ctttttcccc ttccccaaca
     6481 caaactaatt tcattcggca aggttgacga tgttgtgtaa ccgcagtata cattgcagta
     6541 aatgaagatt tatacacttt cacattttct gccccatatt gctcaatcgc ttttggctca
     6601 cttaaaccaa cagtacctat tggtgggtgg ctaaaaacga ctgtcggtac taagctataa
     6661 tccaaatgtt catttggttt attattgaac aaccgttccg atagcctgcg accagctgca
     6721 actgcaacag gagttaattc aataccacct tcaataatat caccaacagc atagatattt
     6781 ggcacattag tattttggaa tttatccact ttgataaaac cacgctcgtt ggtttcaaca
     6841 ccagcagcct ctaaattaat cttatctgtc gctggctcac gaccaatagc ccacaccaag
     6901 ctttcaacag aggtttcacg accatcttgc aattttaatg tcaatgaacc atctgcattt
     6961 ttaactactt cttgaggagt cgcttgtgta tgtaattcga tcccatcttg agctaatact
     7021 tcaagcaatg tatccactat taatgggtct tgattacgca ttggagcatg ttgacgaaca
     7081 aaaagatggg tatttactcc taaactatta aatactccag ctaattcaac tgcaatatac
     7141 cctgccccca caattgctac ggacttcggt aaagcatcta gtgcaaatac accatcagaa
     7201 gtgataccgt attcagcccc tttcacattg ggtacagttg gacgaccacc tgttgcaatc
     7261 agaatatggt ctgctgtgac ctcctcaacg gaaccatcag cataactcac ttctaatgtt
     7321 ttagcatctt taaagcgagc aaaaccattt aaaacatcaa cattattttt tgccagcaca
     7381 ttaccatatg aggtatgaat gcgcccaata taggcctggc gactctcaac taatttggca
     7441 taatcaaaat tatttaccgt aatgtcaaaa ccataatcag gggcgtaatg gttaatcgct
     7501 tctgcaactt gtgcaccata gaacatcact tttttgggta cacatcccac gttcacacaa
     7561 gtgccaccta aatgttttgc ttcaataatg gcacattttt gcccatagct tgctgctcga
     7621 ttaattgaag caataccacc actaccaccg ccgatagcaa tataatcata atgtttagcc
     7681 ataagctatt cctcgatcta taaaaacaaa agcaacttat tcgttaagcg ctttatcaaa
     7741 ttaaatttgc atagaagact aatgtttcat atgccctgaa ttcaacattt tatcaatata
     7801 cgccatcgct aatgctgaaa caataaaggc taagtgaata actacttgcc acatcatttg
     7861 cttttcatca agatttgaag cattgataaa tgtttgtaat aaatgaatag aagaaatact
     7921 gataattgcc attgaaagtt ttactttcaa aatagtcgca ttaacgtgat ccaaccattc
     7981 tggctgatca gggtgatcat ctacttttaa tctagagaca aaagtttcat atcctccaac
     8041 aataaccata accaaaagat ttgcaatcat caccacatct attaaattta ataccgctaa
     8101 cataacagta tttgaatcca tttcatttaa attgataact agatgataca atgatttaat
     8161 aaacttatac gcatatatcc cctgtacaac aatcaaccct aaataaatag gtaattgtaa
     8221 ccaacgactt gcgaaaataa ttttacctaa aatatttgcc ctagtattta attccgaatg
     8281 catatatctc ctataaatag caatacaaaa ataaattaca acgctcaaat tttaacaatt
     8341 ttttgccaaa aaattaagat atttaaccgc ttgcacctta tattttaaaa ccttgtccat
     8401 cgttccaaga aaccgtatat tctagaggta aacggcaact tggcaacgct gggtttgctg
     8461 ctttaccgat agctagtagc ataacaggca aataacgttc tgcatctata ttcaataatt
     8521 ttaatacagc agggcgctca aacacgccta tcgcatgagt atcatagccc ttatctttgg
     8581 caattagcat taattgcatt gccgccaaac tagtatcaat taatacctga tctctaattt
     8641 ctgcttgagt tgcttggtta tgaagattta gtaaaaaatc aaatttacgt tcacgaaact
     8701 ctttatgcaa acacccagtt tctaccgatt gatcaacaat tgcgcctaat aatttttcat
     8761 attgcaaatc tgccaatatc accacaatag cagacgctgt ttcacaaggt gggccattaa
     8821 aggcaacatt ttttgataat gctgctttaa gaatttcaac atcaataatg acaaaacgcc
     8881 aaggttgcag atttgctttt gagggagcaa gctgggataa agcgaccatt tcttctaatt
     8941 cagttctact aatcttaatt gttgaattaa aagctttgat agttttacgc tgttcaatcg
     9001 tatgtttcaa ttccatctct tttctcctat ctctcaa
//
LOCUS       DANLXD010000098         8970 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.098, whole genome shotgun sequence.
ACCESSION   DANLXD010000098 DANLXD010000000
VERSION     DANLXD010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8970)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8970)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8970
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.098"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            64..1077
                     /gene="cas1c"
                     /locus_tag="PXD18_002051"
     CDS             64..1077
                     /gene="cas1c"
                     /locus_tag="PXD18_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003762781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated endonuclease Cas1"
                     /protein_id="HDL6302442.1"
                     /translation="MRKLQNTLYITTQGSYLHKERETLVVEQDRKKVAQLPIHSIGHI
                     FCFGNVLVSPFLMGFCGENNVNLAFFTENGRYLGRLQGRQSGNVLLRRAQYKKSETNP
                     VPVARNIIAAKIQASKRVLQRQIRNHGENADLQSTITALNYSLQQLKTADNLDLIRGI
                     EGDAAARYFGVFSHLIKENSGFHFDGRNRRPPRDGVNALLSFLYSIVGKDISGALQGV
                     GLDPQIGFLHADRSGRDSLAQDILEEFRAWWVDRMVLSLINRGQVKPDDFVTEASGAV
                     TLKPEARKLLFQTLQAKKQEKIIHPFLEEEVEIGLLPYIQAMLLARHLRGDLAEYPPF
                     LMR"
     gene            1144..1437
                     /gene="cas2"
                     /locus_tag="PXD18_002052"
     CDS             1144..1437
                     /gene="cas2"
                     /locus_tag="PXD18_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005540845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HDL6302443.1"
                     /translation="MLMLITYDISFDDPEGQARLRRIAKHCLDYGVRAQYSVFECDVT
                     PAQWVTLKNKLLATYNPDCDSLRFYHLGSKWRNKVEHHGAKPSVDIFKDTLIL"
     repeat_region   1629..2394
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=1763..1793
                     /rpt_unit_seq="cagccacctacgcgtggctgtgaattgaaac"
     gene            2579..4054
                     /gene="rng"
                     /locus_tag="PXD18_002053"
     CDS             2579..4054
                     /gene="rng"
                     /locus_tag="PXD18_002053"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HDL6302444.1"
                     /translation="MSSTELLVNVTPSETRVALVENGILKELHIEREAKRGIVGNIYK
                     GRVTRVLPGMQSAFVDIGLEKAAFLHASDIVSHTECVDENEKKQFLVKDISELVREGQ
                     DIVVQVVKDPIGTKGARLTTDITLPSRYLVFMPENSHVGVSQRIESEEERARLKSLVE
                     PYCDELGGFIVRTAAEEATEESLKQDVEFLKRLWRKVLERKGKYSAKSMLYGELALAQ
                     RVLRDFIGTHINSVRIDSKLTYEQVREFLAEFMPELTDCVTLYTGQQTLFDAYGVEKA
                     IQKALDKRVDLKSGGYLIIEQTEAMTTIDINTGAFVGHRNLAHTIFNTNIEAIQAIAH
                     QLQLRNLGGIIIIDFIDMQEEEHRERVLQSLQEALKGDRVKTNVNGFTQLGLVEMTRK
                     RTRESLERILCCDCQACQGRGTVKTVETVCYEIMREIVRVHHLFKTENIHVYAAKDVA
                     EYLINEESHALLAELQAFIGKKIEIKLEPYYHQEQFDVVVM"
     gene            4208..5710
                     /gene="lysS"
                     /locus_tag="PXD18_002054"
     CDS             4208..5710
                     /gene="lysS"
                     /locus_tag="PXD18_002054"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012054447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDL6302445.1"
                     /translation="MSEVENQELDLNGEMLARREKLNKIREQGNAFPNTFRRDALAKD
                     LHAQYDAVEGETLKEQNIQVKVAGRIMLKRVMGKASFFTIQDVSGAIQLYVARDNLSD
                     SVYEEKVSLWDLGDIVGVEGALFKTKTGELTVRCSEVQLLTKSLRPLPDKHHGLTDLE
                     TRYRQRYLDLISNEESRRTFMIRSQVVSGIRKFFLERDFIEVETPMLQVIPGGAAAKP
                     FITHHNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNPEFTMIEY
                     YQAYADYHDLMDNTEELLRQLALDILGTTDVPYGDYVFDFGKPFERITMHDAIVKYGN
                     GIQREDLDSFEKSVEIAKGLGIEIQKSWGLGSVVNAIFEEVAEHQLIQPTFLMAHPAE
                     ISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDEA
                     MFKDEDFIVALEHGLPPTAGEGLGIDRLVMIFANAPSIRDVILFPAMRQK"
     gene            complement(5788..6861)
                     /locus_tag="PXD18_002055"
     CDS             complement(5788..6861)
                     /locus_tag="PXD18_002055"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HDL6302446.1"
                     /translation="MAQQITLFEDVPLPLTLGGELSPITVAYQTYGRLNAEKSNAVLL
                     CHALTGDAKPYYDSPTEKGWWQDFIGKGLAFDTDKYFFICSNVLGGCKGTTGPASINP
                     KTNKPYGSLFPIITVQDIVNVQKALLDYLEIPQLHAVVGGSFGGMQATQWGISYPDKV
                     RNIINLCSSLTLSAEAIGFNHVMRQAIINDPHFNGGNYYDGIAPDNGLKIARMLGMLT
                     YRTDIQLAKAFGRETKQQGQIWGDHFQVESYLSYQGTKFLGRFDANTYLRLLRALDLY
                     DPALGYENEETALKRIKANYTFVAVTSDQLFKQVDVYKSKQKLEQAGVNLEFHEFHSD
                     FGHDAFLVDYDFFEPMIKAGLAK"
     gene            7129..7812
                     /locus_tag="PXD18_002056"
     CDS             7129..7812
                     /locus_tag="PXD18_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDL6302447.1"
                     /translation="MNQTRDRLEKLPLFHKMQQFIIKALKIIAIFPLLGIAILLVVDS
                     LTSYIVRDKIYTDSKQIPYREYAVVLGTAKFYSKDVINQYYKYRLEAAKQLVQEGKVN
                     QLLLSGDNKTPYYNEPKTMTSDLLKMGIATSKIKQDYAGYTTFYSIIRAKKVYKLPPF
                     TIISQKFHCERALFIAKFRDIDAICYAATYPEGAYQVRMREILARSAMVFSLLIGKEP
                     ESLEDIRSK"
     gene            complement(7849..8688)
                     /gene="purU"
                     /locus_tag="PXD18_002057"
     CDS             complement(7849..8688)
                     /gene="purU"
                     /locus_tag="PXD18_002057"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HDL6302448.1"
                     /translation="MLQQHKILLTECPDDTGLVAKITNICYKHQLNIIKNSEFVENET
                     KRFFMRTELNGIFNDETLLTDLKFTLPEGSSYKLLPKQRKRIVILVTKEAHCLGDLLM
                     KNYYGGLDVEIAAVIGNHETLKSLVERFDIPFHLVSHENLTRVEHDKLLAEKIDEYSP
                     DYIVLAKYMRVLNPEFVARYPNRVVNIHHSFLPAFIGAKPYHRAYERGVKIIGATAHF
                     VNDELDEGPIIMQNVINVDHTYTAEAMMRAGRDVEKTVLSQALELVLADKVFVYKNKT
                     IIL"
     gene            complement(8758..8892)
                     /locus_tag="PXD18_002058"
                     /pseudo
     CDS             complement(8758..8892)
                     /locus_tag="PXD18_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005460020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="H-NS histone family protein"
BASE COUNT         2700 a         1587 c         1950 g         2733 t
ORIGIN      
        1 aaaatcagaa aaatatattt aaataattat gatgtgagat taaagttaaa gggattttca
       61 accatgcgca aactacaaaa caccctctac attaccaccc aaggtagcta tttgcacaaa
      121 gagcgagaaa ccttggtggt ggagcaagat cggaagaaag tggcacagtt gccgattcat
      181 tccattgggc atattttttg ttttggcaat gtgttagtgt cgccgttttt aatgggattt
      241 tgtggcgaaa ataacgtaaa tttagcgttt tttaccgaaa atgggcgtta tcttgggcgg
      301 ttgcaggggc ggcaaagtgg taatgtattg ttacgccgag cccagtataa aaagtcggag
      361 accaaccctg ttcctgtggc tcgcaacatc attgcagcca aaattcaagc atctaagcgg
      421 gtgttacaac ggcaaattcg taatcacggc gaaaatgctg accttcaatc gacaattacc
      481 gcattaaatt acagcctgca acagttgaaa acagcagaca atttggattt gattcgtggc
      541 attgagggcg atgctgcggc tcgttatttt ggggtgtttt ctcatcttat caaagaaaat
      601 agcggtttcc actttgacgg acgtaatcgc cgcccacctc gtgacggtgt gaatgcgttg
      661 ctttcatttc tttatagcat tgtagggaaa gatattagcg gggcattgca aggcgtgggg
      721 cttgatcccc agattggctt tttgcatgca gatcgttcgg ggcgagatag cttagctcaa
      781 gatattttgg aggaatttcg agcgtggtgg gtggacagaa tggtgctgtc gctgatcaat
      841 cgagggcagg ttaagcctga tgattttgtg acggaagcca gtggtgcggt aacgctcaag
      901 cctgaagcca gaaaattact atttcaaacc ttgcaagcga aaaaacaaga aaaaatcatc
      961 cacccatttt tagaggaaga agtggaaatc ggcttgttac cttatatcca agcgatgtta
     1021 ttggctcgtc atttgcgtgg cgatttggca gaatatccgc cgtttttaat gcgttaaaat
     1081 ctgcaaaatt ttgttgaaat ttgaccgctt gtttatgttt tattcattga ggaattagca
     1141 actatgctga tgttgattac ctacgacatt tcatttgatg accccgaagg gcaggctcgc
     1201 ctacgccgta ttgctaagca ttgtttggat tatggtgtgc gggcgcaata ttctgtgttt
     1261 gagtgtgatg ttactcctgc tcagtgggta acattgaaaa ataaattatt ggcaacttac
     1321 aacccagact gtgatagttt gcgcttttac catttaggca gtaaatggag gaataaagtt
     1381 gagcaccatg gcgcaaaacc ttcagtggat atttttaaag atacgctgat tttataaatc
     1441 gctagcctgt agttctcata aaaatgtagc aaggttagcg aatctatatt gttctttaat
     1501 aatcaaggaa ttagaaaaaa taaggcacaa tatattggcg atatgctata ctttatccac
     1561 tctctacaaa acgttagcga ataaagggct aaaaagcctg atatttcaat acgttatctt
     1621 atagggacca gccacctacg cgtggctgcg aattgaaacc ctataacgag caatggcatt
     1681 ttgatctacg gtaaaccagc cacctacgcg tggctgcgaa ttgaaactgc gatttttgga
     1741 tttttcgggc gataaatgat accagccacc tacgcgtggc tgtgaattga aactcgtggc
     1801 tggttataca aagaaaagca ttgttgggca gccacctacg cgtggctgtg aattgaaact
     1861 taaatctaaa gctaaagcta ttttattaat taaagcagcc acctacgcgt ggctgtgaat
     1921 tgaaacttta ccgtttaccg attggatttt aatgctagag gcagccacct acgcgtggct
     1981 gtgaattgaa accctaaatt gccgtaaaaa tctgccatta gctacgcgca gccacctacg
     2041 cgtggctgtg aattgaaacc tcataacgaa tccaatcctg ttcggttaat ccccgcagcc
     2101 acctacgcgt ggctgtgaat tgaaacaggg gcgtgtaccg caatcaattt taattataac
     2161 caagcagcca cctacgcgtg gctgtgaatt gaaactttat ctgttgcggt caattgtata
     2221 tcttgaattt gcagccacct acgcgtggct gtgaattgaa acctcgtctt gaattggaaa
     2281 atcaagggcg acaataggca gccaccttcg cgtggctgtg tattgaaacg gtgtacccac
     2341 aaatcctatg ttttcgccat tggctgctac cttcgcatca atatatattg aaatatcaat
     2401 ggcaaatttg tatgttgtta attagactga ttgcatctgc tatgtatcat agtaatgacg
     2461 aaaatattct attttgcaaa aaataatcag aaattacccg cttgttcgaa ctgagttttt
     2521 gttttctaag atgtgaaatg atacacttta gatagtttta aaatatagag acagtaagat
     2581 gagtagtacg gaattattag tgaatgttac cccaagcgaa acaagggtag cgttggtaga
     2641 aaacggaata ttgaaagaat tacatattga gcgggaagct aaacgcggga ttgttggtaa
     2701 tatttataag ggaagggtga caagggtatt accaggtatg caatctgctt ttgtggatat
     2761 cggcttggag aaggctgctt ttttgcacgc ttctgacatc gtttcgcata cggaatgtgt
     2821 tgatgaaaat gaaaagaagc aatttctggt taaagatatt tctgaattgg tgcgtgaagg
     2881 gcaagatata gttgtacaag tagtgaaaga tccaattggt actaaaggag ctaggctcac
     2941 tactgatatt acgttaccat ctcgttattt agtgtttatg ccagaaaata gccatgtggg
     3001 agtatctcag cggattgaaa gtgaagaaga gcgtgctcgt ttaaaaagct tggttgagcc
     3061 ttattgtgat gaacttgggg gctttattgt acgtaccgct gcagaagagg caactgaaga
     3121 aagtttaaag caagatgttg aatttttaaa acggttgtgg cgtaaagtat tagaacgaaa
     3181 agggaaatat tccgcaaaat caatgcttta tggagagctt gcgcttgctc aaagggtact
     3241 gcgtgatttt attggtacac atatcaattc ggttagaatc gattcaaagc taacttatga
     3301 gcaagtgcga gaatttttag ctgagtttat gccagaatta acggattgtg tcaccctcta
     3361 taccggtcag caaactttat ttgatgccta tggtgtagaa aaggcaatcc aaaaggcatt
     3421 ggataaacgg gttgatttaa aatcgggggg ctatttaatt attgagcaaa ctgaggcgat
     3481 gacgactatt gatattaata ctggtgcttt tgtcggacat cgtaaccttg cacatacgat
     3541 tttcaacaca aatattgaag caatacaggc aattgcacac cagctacagt tgcgtaattt
     3601 aggtggtatt atcattattg attttattga tatgcaagag gaagaacatc gtgagcgcgt
     3661 tttacaatcg ttacaagagg cattaaaagg cgatcgtgtt aaaaccaatg tgaatggctt
     3721 tactcagctt ggcttggtgg agatgaccag aaaacgtaca agggagagtc tagagcgaat
     3781 tctttgttgc gattgccaag cttgccaagg gcgtggcaca gtgaaaactg tagagacggt
     3841 ttgctatgaa attatgcgtg aaattgtgcg tgtacatcat ttgtttaaga cagaaaatat
     3901 tcacgtttat gcagctaaag atgttgctga atatttaatt aacgaggaaa gccacgcatt
     3961 attggctgag cttcaggcgt ttatcggtaa aaaaattgag attaaacttg agccatatta
     4021 tcatcaagag cagtttgatg tggtcgtgat gtaatctatt acttggttga ggctaaatag
     4081 ttagcctcaa tatcgttagt tacaaaaaat ttagaaaatc tgaccgcttg tttcctatcc
     4141 aaattcctca aaataacgta taatcgtcca gttttattta tccttttttg aaatctaagg
     4201 taattcaatg tctgaagtag aaaatcaaga attagatcta aacggtgaaa tgttagcccg
     4261 ccgtgaaaaa ttaaacaaaa tccgtgagca gggtaacgca tttccaaata cattccgtcg
     4321 tgatgcgtta gccaaagatc tgcacgctca atatgatgca gtggaaggtg aaaccttaaa
     4381 agaacagaat attcaagtga aagttgccgg tcgtattatg ttaaaacgag taatgggtaa
     4441 ggcatctttc tttaccattc aagatgtgag cggtgcgatt cagctttatg tagctcgtga
     4501 taacttaagt gacagcgttt acgaagaaaa agtcagcctt tgggatttag gcgacattgt
     4561 gggcgtcgaa ggtgcgttat ttaaaaccaa aaccggtgaa ttaacggttc gttgctctga
     4621 agttcaactt ttaaccaagt ctttacgccc gttgccggat aaacatcacg gtttaacgga
     4681 tttagaaact cgttatcgtc agcgttattt agacttgatt tctaatgaag aatctcgccg
     4741 tacttttatg atccgctcgc aagtagtttc aggcattcgc aaattcttct tagaaagaga
     4801 ctttattgaa gttgaaacgc caatgttgca agtgatcccg ggcggtgcgg cagcgaaacc
     4861 gtttatcact catcataatg cgttagatgt ggatatgtat ctgcgtattg ctccagagct
     4921 ttacttaaaa cgtttagttg tgggtggttt tgagcgagta tttgagctta accgtaactt
     4981 ccgtaacgaa ggggtttcag tacgccacaa tcctgaattt acaatgattg agtactacca
     5041 agcctatgcg gattatcacg atttaatgga taataccgaa gaactgttac gccaattagc
     5101 cttagatatt cttggcacaa ctgacgtacc ttatggtgat tatgtattcg atttcggtaa
     5161 accgtttgag cgtattacga tgcacgatgc gattgtgaaa tatggtaacg gcattcaacg
     5221 tgaagattta gacagcttcg agaaaagtgt ggaaattgcg aaaggcttag gcattgaaat
     5281 tcaaaaatct tggggtttag gctcggtagt caatgcgatt tttgaagaag tggcagaaca
     5341 tcaattaatt cagccaactt tcttgatggc tcacccggca gaaatttcac cattagctcg
     5401 ccgtaatgat gaaaacccag aggtaactga tcgttttgag ttatttatcg gtggtcgtga
     5461 aattggtaat ggtttctcag aattaaacga tgcagaagac caagcagagc gttttgatgc
     5521 tcaagttgcg gcgaaagatg ccggtgatga tgaagcaatg tttaaagatg aagactttat
     5581 cgtggcattg gaacacggtc tgccgccaac agcgggtgaa ggtttaggaa ttgaccgctt
     5641 agtaatgatt ttcgctaacg ccccatcaat ccgtgatgta attttattcc cagcgatgcg
     5701 tcagaagtaa tcagaaatag aacaaaagca cacttcggtg tgcttttttg tattacaagc
     5761 ggtcaaattt ttaataaaaa atgcaattta ttttgctaat ccggctttaa tcatcggttc
     5821 aaaaaagtca taatcaacca aaaaggcatc gtgtccgaaa tcggagtgaa actcgtggaa
     5881 ctccaaattt acgcctgcct gttctaattt ttgtttgctc ttatacacgt caacttgctt
     5941 gaatagttgg tcgcttgtta ccgctacaaa agtgtagttg gctttaatac gttttagggc
     6001 ggtttcttca ttttcatagc caagagccgg gtcgtataaa tctaatgctc ggagtaaacg
     6061 gaggtaagtg ttggcatcga aacgacctaa aaatttcgtg ccttgatagc ttaaatagga
     6121 ttccacttgg aaatggtcgc cccaaatttg tccttgctgt ttggtttctc gtccaaaggc
     6181 tttagcaagt tgaatatcag tacggtaagt cagcataccg agcatacggg cgatttttaa
     6241 gccgttatca ggtgcaatgc catcataata gttcccaccg ttaaagtgtg gatcgttaat
     6301 aatagcttgg cgcataacgt ggttaaaacc gatagcctcg gcacttaggg taagtgacga
     6361 acaaagattt ataatgttgc gaactttatc agggtaacta ataccccact gtgttgcttg
     6421 cattccgccg aaagatcccc ctaccactgc gtgaagttga gggatttcta aatagtccaa
     6481 taatgctttt tgtacattaa caatatcttg cactgtaata attggaaaca aactaccgta
     6541 aggtttattg gttttagggt taatcgaagc tgggccggtt gtgcctttac aaccgcctaa
     6601 tacattactg caaataaaga aatatttatc ggtatcaaac gcaagccctt tgccgatgaa
     6661 atcttgccac cagcctttct cggttggtga gtcatagtaa ggcttagcat caccggtaag
     6721 ggcgtggcaa agcaagaccg cattgctttt ctctgcattt aatctgccgt aagtctggta
     6781 agccactgtg ataggggaca gttcgcctcc taatgtgagt ggtaaaggta cgtcctcaaa
     6841 aagggtaatc tgctgagcca taaaaatcct gtttgcaaaa aattctgctt ttttgaccgc
     6901 ttgttgtaat gaccgttaaa ttagcggtgt tcatttcaat tgtcaagaat ttttagacgt
     6961 ctaaacgtct agatttttaa acggctaaaa tcaaaatttt attgctgaga agatatttat
     7021 tacttaacaa ataacatgaa atagaataaa tttattgaac gattagacta ttttgtttgt
     7081 ctctaattta cccatcttaa atagggtagc aaaagtaaag gatctcattt gaaccaaacg
     7141 cgtgataggt tagaaaaatt gccacttttc cataaaatgc agcagtttat tattaaggca
     7201 ttgaaaataa ttgcaatttt ccccttattg ggaatagcta tattattagt ggttgattca
     7261 cttacaagtt atattgtgag ggataaaatt tatacagata gtaaacagat tccttaccgg
     7321 gagtatgcag ttgtactcgg tacggcaaaa ttttactcta aagatgtgat taaccaatat
     7381 tataaatatc gtttggaagc cgctaagcaa ttagtccaag aaggaaaggt caatcagctt
     7441 ttgttaagtg gagataataa aacgccgtac tataatgagc caaaaacaat gacaagtgat
     7501 ctacttaaaa tggggattgc gacttcaaaa attaagcagg attatgcggg gtataccact
     7561 ttttattcaa taattagggc taaaaaagta tataaattac cgccatttac gattatctcc
     7621 caaaaattcc actgtgaaag ggcattgttt attgcaaaat ttagggatat tgatgcaatt
     7681 tgttatgccg ctacatatcc agagggggct tatcaggtac gaatgcggga aattttagcc
     7741 agatcggcaa tggtttttag tttgttgata ggtaaagagc ctgaatcatt ggaagatatc
     7801 cgttctaaat gagatagccg gtcagataat gttgaccggc tattttgctt ataaaataat
     7861 ggttttgttt ttatatacaa atactttgtc agcaagcact aattctaagg cttggctaag
     7921 tacggttttc tcgacatcac gtccggcacg catcatagcc tctgcggtgt aggtgtgatc
     7981 aacattaatc acattttgca taataatcgg gccttcatct aattcatcat tcacaaaatg
     8041 ggcggttgca ccgataattt tcactccacg ttcgtatgca cgatgataag gttttgcacc
     8101 aatgaaagcg ggtaagaacg agtggtgaat attgacaact cggtttggat aacgagcgac
     8161 aaattccgga ttcagcaccc gcatatattt agccaacaca atataatcag gtgaatattc
     8221 atcaattttt tccgctaata atttatcgtg ttccactcgg gttaaatttt cgtggctgac
     8281 taaatggaat ggaatatcga aacgttcaac taaacttttt aatgtttcgt ggtttccaat
     8341 cacggcagca atttctacat ctaatccacc atagtaattt ttcatcagta agtcacctaa
     8401 acaatgtgct tctttggtaa ctaaaataac gatacgtttt ctttgtttag ggagtaattt
     8461 atagcttgag ccttcaggta aggtaaattt taaatcagtg agtaaggttt catcattaaa
     8521 aattccgttt aattcggtac gcataaaaaa acgtttagtt tcattctcaa caaattcaga
     8581 atttttaata atatttaatt ggtgcttata gcaaatattg gtaattttag cgacaagtcc
     8641 tgtatcatca ggacattcag ttaataatat tttgtgttgt tgtagcattt catttcctat
     8701 tataaaaata agagaactca attgagttct ctttaaacta aaaatagtta tagccaatta
     8761 aatagcaaaa tcttctaatt ttttaccact atctaaagca tcttgtaatg cctttggtgt
     8821 tctgccttga cctgtccaag ttttctcatt gccgttagca tcaacaaatt tatatttagc
     8881 cgggcgaggt gatagtgctt tgcgggtttt gattacttta tctgctaata attcagctaa
     8941 ttcatcaata gataacccat cttgttttag
//
LOCUS       DANLXD010000099         8820 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.099, whole genome shotgun sequence.
ACCESSION   DANLXD010000099 DANLXD010000000
VERSION     DANLXD010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8820
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.099"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            10..1128
                     /gene="rnd"
                     /locus_tag="PXD18_002059"
     CDS             10..1128
                     /gene="rnd"
                     /locus_tag="PXD18_002059"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HDL6302449.1"
                     /translation="MESLIHYQWVETNEQLEAVCEQARKTKVVALDTEFIRTRTYYPI
                     LGLIQLFDGQQVSLIDPNTISDFSPFVSLLADKNIIKVLHACSEDLEVFEYQFKQLPE
                     PMLDTQVMAAFAGIGISMGFAKLVSHYLNIELDKGASRTDWLARPLSAEQLQYAAADV
                     WYLLPVYEKLAQALTKSTWQSAVAEECVALLKKAKQPINKEKAYKNIANAWRLNREEL
                     AILQVLAKWRIEEAQKRNLALNFVVKEASLVQIAKSCPKHTSSLLEFMHPNEVRIHGK
                     KILWLVEQGKAIESNDYPELIQRLVDEKGYKYYMQAMLQKLLEIQPLDIVPELVASKR
                     QLNQLFKWYIDGKPSEKIPELLIGWRKPFGEQLLSVLS"
     gene            1185..1667
                     /gene="lrp"
                     /locus_tag="PXD18_002060"
     CDS             1185..1667
                     /gene="lrp"
                     /locus_tag="PXD18_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005695827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-responsive transcriptional regulator
                     Lrp"
                     /protein_id="HDL6302450.1"
                     /translation="MENKKPPKALDAIDLKILNELQRNGKISNIELSKRVGLSPTPCL
                     ERVKRLEKNNVIMGYKALLNPELLDAPLLVIVEITLVRGKPDVFEEFNKAIQQLDEIQ
                     ECHLVSGDFDYLLKTRVADMVSYRKLLGTTLLRLPGVNDTRTYVVMEEVKQTNYLLLK
                     "
     gene            1678..4338
                     /locus_tag="PXD18_002061"
     CDS             1678..4338
                     /locus_tag="PXD18_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HDL6302451.1"
                     /translation="MIEQLKPHLKGKENLIKLMLLLTGFLGVYLLIAWASYSPLDNAW
                     SVASSITQTTLNKTGHFGAWSIDMLYAMFGKVAVLVPIALIIFSIYSLGMGLSVDMKW
                     KTVFIRLASFLLLMVGLAGLFSVLFSNSAYYLSGGFVGGVWETILSDTIGQFGALLIA
                     MLFTIAGLYFCSVQSLLPILTQFYEWIMAKSEESKTAESLQHLQNTEQKQPLVTENEA
                     VEVVDDHKPQFTDISAFKRPNISGLRHSENVEIDNREMYEIERDLELPTINILIQPDM
                     VNQVAEQATSGYELPNEESNVLQMPTIRLNTAIENEVDTIENSSSLEDLKIAESMLPQ
                     IQLDNDIEDTEEAIDDVREITPEFMVTPPKAMKDVSEQPAYPKGYGDTLIHPLLQRKV
                     ITEKPTTPLPTLDLLDKAPIQSQQITEQEIRETSVRLEAELANFGVKATVEDVLVGPV
                     VTRYEIQPAAGVKASKITNLASDIARGLMFKAIRITEVIPNKPYMGIETPNKHRETVW
                     LRDVLDSDEFRNTTATLPMALGKDISGEPVVVDMAKMPHLLVAGQTGGGKSVGVNTMI
                     LSLLFKLTPEQVRFIMIDPKVVELSIYNDIPHLLTPVVTDMKKAANALRWAVEEMERR
                     YLLVSHLQVRNIEGYNAKIDQAAAMNLPIPDPTWRPGDSMDSLPPPLQKLSYIVLIVD
                     EFADLMMSAGKEVEEYIMRIAQKARAVGIHLILATQRPSTDVITGVIKANIPSRIAFT
                     VASQIDSRTILDSGGAEALLGRGDMLYSGAGSPDIIRIHGAFMKDEEVQRVADNWRAR
                     GKPNYLESIVESRSEEADGKNDGGTGDLDPLFDEVVEYITETGSVSISNIQRRFSLGF
                     NRAARIVDQMEAQGIVSEPLKGGKREVLAR"
     gene            4490..5329
                     /locus_tag="PXD18_002062"
     CDS             4490..5329
                     /locus_tag="PXD18_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HDL6302452.1"
                     /translation="MRLDDIKESKNVEDRRFNNVGRTKVGRGKGGILTFIIVLVGAYY
                     GVDLTGLMGGGVEYEEQTSALNESEEKQLRTLSAKVLTTTENIWTSYFQQNGLTYKEP
                     SLVLYRGAIQTACGTGQSAMGPFYCPVDQKVYLDLSFYDDMRKKLRASGDFAFSYVIA
                     HEVGHHVQNLLGITSKTQRAQMKASSKAEANQISVNVELQADCFAGVWGHQLAKANRL
                     EEGDVEEAFNAAQAVGDDRLQQQSRGYVVPDSFTHGSSAQRLAWFRKGLTTGNPAVCN
                     TFN"
     gene            5418..6500
                     /gene="aroG"
                     /locus_tag="PXD18_002063"
     CDS             5418..6500
                     /gene="aroG"
                     /locus_tag="PXD18_002063"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HDL6302453.1"
                     /translation="MSYIKNDDVRITSIEELLPPIALLEAYPASDVAAETVAKTRQSI
                     HKILHGADDRLLVVIGPCSIHDPKAALEYAQKIKAMRADPKINQNLEVVMRVYFEKPR
                     TTVGWKGLINDPYLNETFALNDGLRIARKVLSDINDLSVPTAGEFLDMITPQYVADFM
                     SWGAIGARTTESQVHRELASGLSCAVGFKNGTNGSVKIALDAISSAKSPHHFLSVTKF
                     GHSAIVSTAGNPDCHIILRGGDSATNYDADSVAAACAAIEKSGGRPHVMIDFSHANSQ
                     KQFKRQMDVCADVCNQIAGGSDFISGVMIESHLVEGRQDLIEGKGLEALVYGQSITDG
                     CIGWEDSEKALFALAEAVEKRRNFAK"
     gene            6587..7279
                     /gene="tsaB"
                     /locus_tag="PXD18_002064"
     CDS             6587..7279
                     /gene="tsaB"
                     /locus_tag="PXD18_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HDL6302454.1"
                     /translation="MKPSILALDTATEACSVALQYNGNITFLDEISPRSHTQRILPMV
                     DELLNQANIELKEVNYLVFGRGPGSFTGVRVGVSVAQGLAMGANLPVVAVSNLKAMAE
                     EAYQKLGATKVIALIDARMNEVYFAQFERKGEEWNEVVAEQVCSPEVAISQFQMSEET
                     VVVGTGWAAYSQFSEQNLPLVISDITLPSSRYMLSIAETEIQKGNIQSAFEIEPVYLR
                     NEVTWEKLPHKQ"
     gene            complement(7296..8105)
                     /locus_tag="PXD18_002065"
     CDS             complement(7296..8105)
                     /locus_tag="PXD18_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDL6302455.1"
                     /translation="MTMTVIIILIICGIIVNITSALFGIGGGVLMMPILHSLFPELPL
                     QVISACSLTIVIGSATINLCLFHHQQIKINRKNVLIWSLAMMLGVQIGFELSFLFSDN
                     SIIAIFILTLLTLSFKTLFHKPRVKAIVPPKPKEAVSNATMCSLGGLIAGITGIGGGS
                     IMAPIVTQIRSVSPKQVAVYTNYMMVIGGIGNLYGYLSRPFVLNSTLATWQIGYVNFA
                     IVGTVVISSLFTVYFSMKLRNILSPELTTKLLGVILFTIACYMGFLQYLFT"
     gene            8204..8755
                     /locus_tag="PXD18_002066"
     CDS             8204..8755
                     /locus_tag="PXD18_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HDL6302456.1"
                     /translation="MNNMPTPEQLMSCQLSVMSDLEKGVVIYSQGYHAREFYFLKSGL
                     IGLYHMLENGKESLVRVYKANDYFGFRTFFGDNRYHCSARVLQPAELIRITPLNFIEF
                     WSNNSALIISLLKQLSTELQDAEHRLSMVSYQKTQERVMNSIHYLHQRYPNYHWTNRE
                     IAEFAGCETETAIRLRRELKKIS"
BASE COUNT         2802 a         1602 c         1944 g         2472 t
ORIGIN      
        1 gaaaagtata tggagtcttt gattcactac caatgggttg aaacaaatga gcaattagag
       61 gccgtatgtg aacaggccag aaaaacaaaa gtagttgcct tagatacaga gtttatccgt
      121 acacgtacct attatccgat attgggttta attcaactct ttgatggcca acaggttagc
      181 cttattgatc caaatacgat ttctgacttc tcgccttttg tgtcattatt agccgataaa
      241 aatatcataa aagtattaca tgcctgtagt gaggatttag aagtttttga gtatcaattt
      301 aagcaattgc cagagccgat gttggatact caggtgatgg cagcctttgc cggcattggt
      361 atttcgatgg ggtttgcaaa attggtttcc cactacttaa atattgaact agacaaaggc
      421 gcttcccgaa ccgattggct tgccagaccg ctaagcgctg aacaattaca atatgcggca
      481 gctgatgttt ggtatttatt gccagtttat gagaaattgg cacaagcatt aacaaaaagc
      541 acttggcaaa gtgctgtagc agaggagtgt gtcgctttgt tgaagaaagc gaaacagcct
      601 atcaataagg aaaaagccta taaaaatatt gccaatgctt ggcgattgaa tcgggaagag
      661 ttagccatat tacaagtatt agcgaaatgg cggattgaag aagcacaaaa gcgcaatctt
      721 gccttaaatt ttgtcgtgaa ggaggcaagt ttagttcaaa tcgcaaaaag ctgtcctaaa
      781 cacacttctt cgctgttaga atttatgcac ccaaatgaag tcagaattca cggaaaaaaa
      841 atactatggt tggttgagca aggaaaagca atagaatcga atgattatcc tgaactcatt
      901 cagcgcttgg tggatgaaaa gggttataaa tattatatgc aagcgatgtt gcaaaaatta
      961 ttagaaattc aaccgcttga tatcgtaccg gagttggttg caagtaaacg tcaattaaat
     1021 cagctattta aatggtatat tgatggaaaa ccatcagaaa aaattcctga attattaatc
     1081 ggttggcgaa aaccttttgg tgaacagctg ctatcggttt tatcttaaat ttcattcggg
     1141 ttacatagac tatgtacagt ataattgcct aaaaaggagt ttatatggaa aataaaaaac
     1201 caccaaaagc attagatgcg attgatttaa aaatcttaaa cgagctacaa cgtaacggga
     1261 aaatttctaa tattgaatta tcaaagcgag ttgggctttc tccaacgccc tgcttagaac
     1321 gggtaaaacg gctagaaaaa aataacgtaa ttatgggcta taaagcttta cttaaccctg
     1381 aattacttga tgccccttta ctggtgattg ttgaaattac tttggtgcgt ggtaagcctg
     1441 atgtatttga agaatttaat aaagcgattc aacaacttga tgaaattcaa gaatgccacc
     1501 tggtatcggg ggattttgat tatctgttaa aaacccgtgt ggcggatatg gtatcgtacc
     1561 gtaagttatt aggcacaaca ttgcttcgtt tgcccggcgt aaatgacact cgaacctatg
     1621 tggtgatgga agaagtaaaa caaaccaact atttgttgtt aaagtaagga gaattgggtg
     1681 attgaacaac ttaaaccaca cctaaaaggc aaagagaact tgatcaaact tatgcttttg
     1741 ttgaccggct ttttgggcgt ttatttgcta attgcttggg caagttatag tccattagat
     1801 aatgcttggt ctgttgcaag cagcattaca caaacaacct tgaataaaac aggtcacttt
     1861 ggtgcttgga gtattgatat gctctatgca atgtttggta aggttgcagt tttagtacct
     1921 attgcattaa ttattttctc aatttatagc ttgggaatgg gtttaagtgt cgatatgaaa
     1981 tggaaaactg tcttcattcg cctagccagt ttcttattat tgatggtcgg tcttgccggg
     2041 ttatttagcg tgcttttttc aaactcagct tattatctgt cgggtggctt tgtcggtgga
     2101 gtttgggaga caatattatc tgatactatc ggacaatttg gtgccttatt gattgcaatg
     2161 ctttttacta tagctggctt atatttttgc tctgttcaat cattattgcc aatattaacg
     2221 caattttatg agtggataat ggcaaaatca gaagagagca aaacagctga atctcttcag
     2281 catttgcaaa atactgagca aaaacaaccg cttgtaactg aaaatgaagc ggtggaagtt
     2341 gtagatgacc ataaaccgca atttaccgat atctccgcct ttaaacgccc aaacattagt
     2401 ggtttaagac actcggaaaa tgtagagata gataaccgag aaatgtatga aattgaaaga
     2461 gatcttgagc taccgactat taatatttta atacagcctg atatggttaa ccaagttgcg
     2521 gaacaagcta catcaggcta tgagttacca aacgaagaat ccaatgtatt gcaaatgccg
     2581 accattcgct taaataccgc tatcgaaaac gaggtggata caatcgaaaa cagttcatca
     2641 ttggaagacc tgaaaatagc agaatctatg ttacctcaaa ttcagcttga taatgatatt
     2701 gaagatactg aagaagctat tgacgatgtg cgtgaaatta caccggaatt tatggtaacg
     2761 ccgcccaagg cgatgaaaga tgtgtctgag cagccagcct atccaaaagg ctatggtgat
     2821 acgttaattc acccgttgtt acaacgaaaa gtgataaccg aaaaaccgac aacaccattg
     2881 ccaacgctag atttgttgga taaagcaccg attcaaagcc agcaaattac cgaacaggaa
     2941 atacgagaaa cctctgtgcg gctagaagca gaattagcaa actttggcgt aaaagctacc
     3001 gttgaagatg tattggtcgg tccggtagtg acccgttatg aaatccaacc ggctgccggg
     3061 gtaaaagcct ccaaaattac caatttagcg agcgatatag ctcgtggctt aatgtttaaa
     3121 gcgattagga ttactgaagt tatcccaaac aaaccttata tgggtattga aactccgaat
     3181 aaacaccgtg aaacagtgtg gttgcgtgat gtgctagaca gcgatgaatt ccgcaatacc
     3241 actgcaacat tgccaatggc actaggtaaa gacatcagtg gtgagcctgt ggtggtcgat
     3301 atggcgaaaa tgccacactt actggtggca gggcagaccg gtgggggtaa atcggttggg
     3361 gtgaatacga tgattttaag tctattgttc aaacttacac cagaacaagt ccgctttatt
     3421 atgattgacc ctaaagtggt ggagctttcc atttataacg atattcctca cttattaacg
     3481 ccggtagtaa ccgatatgaa aaaagccgcc aacgcactac gctgggcggt ggaggaaatg
     3541 gaacgccgtt atttgctggt aagccattta caggtgcgta atattgaagg ctataatgcg
     3601 aaaatcgacc aagcggcagc gatgaatttg ccgattccag atccaacgtg gcgaccgggc
     3661 gattcaatgg atagccttcc gcctccgcta caaaaattaa gctatattgt gctgattgtc
     3721 gatgagtttg cggatttaat gatgtctgcc ggtaaagaag tggaagagta cattatgcga
     3781 attgctcaaa aagcccgagc ggtgggaatt cacttaattc ttgctaccca acgtccgtca
     3841 accgatgtga ttaccggcgt gattaaagcc aatattccaa gccggattgc gtttacagta
     3901 gcgagccaaa ttgactcaag aactatttta gattcaggtg gagcagaggc attattaggg
     3961 cgaggcgata tgctctattc aggagctggc agcccggata ttattcggat acacggtgcg
     4021 tttatgaaag acgaagaagt gcaacgcgtg gcggataatt ggcgggcaag aggaaaacca
     4081 aactacttgg aaagcattgt ggaatcccgc tcggaagagg ctgatggcaa aaacgatggc
     4141 ggaacgggcg atttagatcc gctatttgac gaggttgttg aatatatcac ggaaaccggt
     4201 tcggtctcta tcagtaatat tcaacgccgc ttctcgcttg gttttaaccg tgcggctaga
     4261 attgtggatc aaatggaagc tcaaggcatt gtttctgagc cacttaaagg tggcaaacga
     4321 gaagtgctgg cgaggtaaaa cacatacaag cggttagatt tctgtgaaat tttgcaaatt
     4381 ttgacaaaaa tctaaccgat tgtatttatc taatgctaaa taagcatagt ataaggctag
     4441 tctttgggct aaaattaacg caatttttac atcttttaag gttgaatata tgcgattaga
     4501 tgatattaaa gaaagtaaaa atgttgaaga cagaagattc aacaatgtgg gtagaactaa
     4561 ggttggtaga gggaaaggtg gaatattaac ctttattatc gtgcttgttg gagcttatta
     4621 tggtgttgac ttaacaggtt taatgggcgg tggcgtagaa tatgaggagc agacatcagc
     4681 attaaatgaa agtgaagaaa aacagctaag aaccttatcc gctaaagtat taacgaccac
     4741 agaaaatatt tggacttcct acttccagca aaatggtcta acttataaag agccgtcttt
     4801 ggtgctttac cgtggggcaa ttcaaactgc ctgtggcacc ggtcaatctg caatgggtcc
     4861 tttctattgc cctgtcgatc aaaaggttta tttagattta tcattctatg atgatatgcg
     4921 taaaaaatta agagcatcgg gcgattttgc cttctcttac gtgattgcac acgaggttgg
     4981 ccaccacgtc caaaatttat tgggcataac aagcaaaacc caacgggctc aaatgaaagc
     5041 ctcatctaaa gccgaagcaa accaaatttc agtcaatgta gaattgcaag ctgactgttt
     5101 tgccggcgtt tggggacacc aactcgcaaa agccaaccga ttagaggaag gcgatgtgga
     5161 agaagccttt aatgctgccc aagcagttgg agatgaccga ttacagcaac aaagtcgtgg
     5221 ctatgtcgtg ccggatagct tcacccacgg ctcatctgca cagcgtttgg cttggtttag
     5281 aaaaggttta accacaggaa atcctgcagt ttgtaataca tttaattaaa aaataattaa
     5341 attatttgaa atctttttat tatcgtacta ctatgatagt acgattttat tttcatttta
     5401 tttagagagt gaacacaatg tcttatatca aaaatgacga tgtcagaatt accagtattg
     5461 aagaattact accacctatt gcattactgg aagcctatcc ggcaagtgat gttgcagcgg
     5521 aaaccgttgc taaaacccgt caatcaatcc acaaaatttt acacggtgcg gatgatcgct
     5581 tattagtggt gattggacct tgctccattc acgacccgaa agcggcatta gaatatgcac
     5641 aaaaaattaa agcaatgcgt gctgatccga aaattaacca aaacttagaa gtggtgatgc
     5701 gtgtctattt tgaaaaaccc cgtacaaccg ttggttggaa aggcttaatt aacgaccctt
     5761 atttgaacga aacctttgcc ttaaacgatg gtttacgcat tgcccgtaaa gtattatctg
     5821 atattaatga tttaagcgtg ccgactgccg gcgagttttt ggatatgatt acaccacaat
     5881 atgtggctga ctttatgagc tggggagcaa ttggggcgag aacgactgaa tctcaagtcc
     5941 accgtgaatt agcctctggt ttatcctgtg cggtaggttt taaaaacggc acgaatggta
     6001 gtgtgaaaat tgcattagat gcaatttctt ccgcaaaatc gccacaccat ttcttatcgg
     6061 tcactaaatt cgggcattct gcgattgttt caacagcagg aaatcctgac tgtcacatta
     6121 ttttgcgtgg tggcgatagc gcaaccaact acgatgctga ctccgttgca gcggcttgtg
     6181 ctgcgattga gaaatccggc ggacgtccac acgtgatgat cgatttcagc cacgctaaca
     6241 gccagaagca gttcaaacgc caaatggacg tttgtgctga tgtgtgcaac caaattgcag
     6301 gtggatcaga ctttatttca ggtgtgatga ttgaaagcca cttggtagaa ggtcgccaag
     6361 acttaattga aggcaaaggt ttagaggcgt tagtttacgg acaaagtatt acagacggct
     6421 gcattggctg ggaagatagt gaaaaagcgt tattcgcact tgctgaagcg gttgaaaagc
     6481 gcagaaattt tgcaaaataa tcttttcttg aaccgagggc gaatataatt cgccctttat
     6541 ttgtttaacc ttaaagcaaa tttaatttat tcaaactaaa catatgatga aacccagcat
     6601 tcttgcttta gatactgcaa cagaggcttg ctctgtagcg ttacagtata acggaaatat
     6661 cacgttctta gatgaaatca gccctcgttc ccatactcaa cgtattttgc cgatggtaga
     6721 tgaattactt aatcaagcca atatcgaact caaagaagta aattatttag tattcggacg
     6781 tgggccgggc agttttaccg gtgtgagggt cggtgtaagt gtggcacaag ggttggcaat
     6841 gggagcgaat ttgccggtgg tagctgtttc taacttaaaa gcaatggcag aagaagcata
     6901 ccaaaaatta ggtgcaacaa aggtaattgc cttaattgat gcccgaatga atgaagttta
     6961 ctttgctcaa tttgaacgaa agggtgaaga atggaatgaa gtggtggctg aacaagtctg
     7021 ttcgccagaa gtcgcaataa gtcaattcca aatgagtgaa gagactgtgg tggttggcac
     7081 aggttgggcg gcatattcgc aattttctga gcaaaatcta ccgcttgtta tcagtgatat
     7141 taccttgcct tccagccgat atatgctttc gattgctgaa actgagattc aaaaaggcaa
     7201 tatccaatct gcttttgaaa tagaaccggt gtatttgcgt aatgaagtta cttgggaaaa
     7261 actacctcat aagcaataat ctattgaact tatggttaag tgaataaata ttgcaaaaag
     7321 cccatataac aggcaatagt gaataggatt acaccaagta atttagtagt taattcggga
     7381 ctcaagatat tgcgtaattt cattgaaaaa tagacagtaa agagagaact tatcactacg
     7441 gtgccgacaa ttgcaaaatt cacatagccg atttgccaag ttgctaaggt tgaattcaac
     7501 acaaaagggc gggataagta gccatataaa ttgccgattc cgccaatcac catcatatag
     7561 ttagtataaa ctgcaacctg tttcggtgaa accgagcgta tttgcgtgac aatcggagcc
     7621 ataatcgaac cgccgccaat gccggtaata cctgcaatta aaccgcctaa actgcacatt
     7681 gtggcattag atactgcttc ttttggttta ggtggtacta ttgctttaac tcttggtttg
     7741 tgaaataggg ttttaaatga aagtgtcagc agggttagaa taaagatagc gataatgctg
     7801 ttatcagaga aaagaaaact gagttcaaac ccaatttgta cgcctaacat catcgcaagt
     7861 gaccaaatca acacattttt tcgattgatt tttatctgtt gatggtggaa taagcataaa
     7921 ttgatagtgg ctgaaccaat cacaatggta agagagcagg cggaaatcac ttggagaggc
     7981 agttcaggaa acagtgaatg taaaatcggc atcattaaaa cacccccgcc aatcccaaat
     8041 agtgcagaag tgatattgac tataatgcca caaatgatca aaataattat cacggtcatt
     8101 gtcataatcc atctcctaaa gtgtgataag tatgcaaaat tttctaaata aaggattatg
     8161 atcgcaatca tatatggaaa aaataaaata ataaggataa tcaatgaaca atatgccaac
     8221 ccccgaacaa ttgatgtctt gccaattaag tgtaatgtct gatctagaaa aaggagtcgt
     8281 catttattct cagggttatc acgccagaga attttatttt ttaaaaagcg gattaatagg
     8341 gctgtaccat atgcttgaaa atggtaaaga gagcttggtg agggtatata aagccaacga
     8401 ttattttggg tttagaacct tttttggcga taatcgctac cattgctcgg ctcgggtgtt
     8461 acagccggca gaattgatac gtattacccc cttaaatttc attgagtttt ggtcgaataa
     8521 ttccgcctta attatctctc tgttaaaaca gctctcgaca gaattacaag acgcagagca
     8581 tcgtttatca atggtttcct atcaaaaaac gcaagagcgg gtaatgaaca gtattcatta
     8641 tttacaccaa cgttatccca attatcactg gactaaccgt gaaatcgccg aatttgcagg
     8701 ttgtgaaacc gaaacagcca ttcgattaag gcgagaatta aagaaaatca gttaaattgt
     8761 cataaattat tcatagttgt gatcaccatc acatatctat tatgacaaac atcatattct
//
LOCUS       DANLXD010000100         8756 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.100, whole genome shotgun sequence.
ACCESSION   DANLXD010000100 DANLXD010000000
VERSION     DANLXD010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8756)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8756)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8756
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.100"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            79..348
                     /locus_tag="PXD18_002067"
     CDS             79..348
                     /locus_tag="PXD18_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005540356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDL6302457.1"
                     /translation="MKIMAVCGSGLGSSFMMEMNIKKVLAKLGVEAEVSHTDLSSVVA
                     DDADLFVMAKDIAASSNVPKEKLIVVKNIVGLAEFEEKLTAYFNQ"
     gene            361..1711
                     /locus_tag="PXD18_002068"
                     /pseudo
     CDS             361..1711
                     /locus_tag="PXD18_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013745980.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
     gene            complement(1806..2954)
                     /gene="dprA"
                     /locus_tag="PXD18_002069"
     CDS             complement(1806..2954)
                     /gene="dprA"
                     /locus_tag="PXD18_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HDL6302458.1"
                     /translation="MAYHYDLLRLLQVPQMGAQRIGRLLAELNFAEFCHYDKLQLKQI
                     GWNEKQIQRWFNPDQKWIDQAMTWSELPNQQIVTLFDENYPFLLKQISTAPPLIYVKG
                     NVESLSLPQIAIVGSRDYSHYGEYWAGQFAAELARHNIIITSGLAIGIDGFAHQKIVM
                     EQGITIAVLGSGLNQVYPARHKKLAEQIVDLGGALVSEFSPNQPPVAENFPRRNRIIS
                     GLSLGTLVIEATLNSGSLITARYALEQGREVFALPNAVQNPYAQGCHKLIKEGALLVE
                     GVEDILEVVASQYQPQQIPLFDESKPTVSTSLQAVKNSEKFAKNLPSLTACQQQIYQH
                     ISLEPMAIDDLAKVTELTIEILLVELLGLELAGVIKQVSGGYVMDNGY"
     gene            3043..3555
                     /gene="def"
                     /locus_tag="PXD18_002070"
     CDS             3043..3555
                     /gene="def"
                     /locus_tag="PXD18_002070"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005621146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDL6302459.1"
                     /translation="MAILDVVLYPDEKLATVCEPVEQVDEALNRFIDDMFETMYEHEG
                     IGLAAPQVGVLKRVITIDIEGDKTNQVVLINPEILESSGETGIEEGCLSIPGHRALVP
                     RKEKVKVKALNRQGEEIIIDADDLFAICIQHEIDHLNGVLFVDHISNLKRQRIKEKMQ
                     KLKKQIARAK"
     gene            3649..4575
                     /gene="rfaD"
                     /locus_tag="PXD18_002071"
     CDS             3649..4575
                     /gene="rfaD"
                     /locus_tag="PXD18_002071"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HDL6302460.1"
                     /translation="MIIVTGGAGMIGSNIVKALNEIGRKDILVVDNLKNGEKFINLVD
                     LDIADYCDKEDFIASIIAGDDFGEIDAVFHQGACSATTEWDGKYLMQNNYEYSKELLH
                     FCLDRQIPFFYASSAATYGGRSDNFIEKREFEGPLNAYGYSKFLFDEYVRRILPEAES
                     PVCGFKYFNVYGPREQHKGSMASVAFHLNNQMLKGENPKLFAGSEQFLRDFVYVEDVA
                     KVNLWAWQNSISGIFNLGTGKAESFQEVANAVIKYHGKGEIETIPFPDHLKSRYQTFT
                     QADLTNLRAAGYTGTFKTVAEGTAEYMAWLNR"
     gene            complement(4643..5173)
                     /gene="fabA"
                     /locus_tag="PXD18_002072"
     CDS             complement(4643..5173)
                     /gene="fabA"
                     /locus_tag="PXD18_002072"
                     /EC_number="4.2.1.59"
                     /EC_number="5.3.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017807287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-hydroxydecanoyl-ACP
                     dehydratase/trans-2-decenoyl-ACP isomerase"
                     /protein_id="HDL6302461.1"
                     /translation="MNSCTPIIKPSYTYEELLLSGKGELFGEKGPQLPAPPMLMMDRI
                     IEMNQEKGNFEKGYIEAEFDIKPDLWFFNCHFINDPVMPGCLGLDAMWQLVGFYLGWI
                     GGEGKGRALGVGEVKFTGQILPTAKKVTYRIHMKRVVNRKLVMGVADGEVEVDGRVIY
                     TATDLKVGLFQDTTAF"
     gene            complement(5286..6923)
                     /locus_tag="PXD18_002073"
     CDS             complement(5286..6923)
                     /locus_tag="PXD18_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL6302462.1"
                     /translation="MTLSLLSSQKLVMQNDFSRLDEKLNFLDFQPQAKQALNQFLQSQ
                     FGALLVLKSELFPEFINEITEYLKKYSVDLPIISKMDFNKNSLFGYSVFLERELKTEY
                     VKGAIHEADKGILIVNIRSLLLDITQWDKLKQALLFGEYEPNSVNHSPYLSAKEKSTF
                     KLILVGEREDISTLSAYDDGLYQFGQYTEIKSYLSLSDNVEQWGGYVQNYAENLINKR
                     LTSTALNQFLQAYIRESESRELVSISPTLLRKHLLGIQNFYPNVTEIDEVKGYFDYLE
                     QQSSILNQYTVGDILTNQLYIETEGEEIGQINGLSVIEFEGIPHSFGEPLRMSCNVQY
                     GDGEITDIERKVELGGNIHSKGIIIAQSCLANLLELPTQLPFSASIAFEQSYGEIDGD
                     SSSLAIFNVLVSALAKVGLPQSIAVTGAIDQFGNVLSVGGVNQKIEGFFNICHARQLT
                     GKQGVIIPAACVSHLSLSSEVVEAVEQGLFKIWTVENVFDAIAILFERDFYDDEKAPN
                     SAQTALFTLIHQNLDERESEETSGSFLSKICKKIKLD"
     gene            7016..7462
                     /gene="matP"
                     /locus_tag="PXD18_002074"
     CDS             7016..7462
                     /gene="matP"
                     /locus_tag="PXD18_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ter protein MatP"
                     /protein_id="HDL6302463.1"
                     /translation="MRYQKLITQETTWKWQYLLKKHREGENITKYEEQSLIDLKVQFL
                     STLQNSPDEVEKWIKSEMTPEQRKKMRQSVRAKRKRFFNAEKQTTKKKSIDLEYSSWL
                     RLSKYAKSQKLTLSEAIVKLTDELENKQLYLEQVAKMKSSLKDLLK"
     gene            complement(7528..8664)
                     /gene="ompA"
                     /locus_tag="PXD18_002075"
     CDS             complement(7528..8664)
                     /gene="ompA"
                     /locus_tag="PXD18_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_119863613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpA"
                     /protein_id="HDL6302464.1"
                     /translation="MKKTLVALAVLSAAAVAQAAPQANTFYAGAKAGWASFHDGLTQF
                     DNTYDYGSGINLGINLGINRNSVTYGVFGGYQILNQNNFGLATELGYDYFGRVRGNTT
                     FSGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDYYVQQHVDKDSR
                     IKVHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAVRTTVGYLIPRGTNFQ
                     YSPDIHSVSAGLSYRFGQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDA
                     AHAEISNLGLANLAIQVNGYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAV
                     GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQVQGSKEVTM"
BASE COUNT         2643 a         1806 c         1658 g         2649 t
ORIGIN      
        1 gttaacattt ctattctata gtatttctat agttcaaaat tcagacaact attcattcac
       61 ctttaatgga gatttactat gaaaattatg gcagtatgtg gttccggctt aggtagcagc
      121 tttatgatgg aaatgaacat taaaaaagta ttggcaaaac tcggtgtcga agcggaagtg
      181 agtcataccg acctttcctc tgttgttgct gatgatgctg atttatttgt gatggcaaaa
      241 gatattgccg caagcagcaa tgtgccgaaa gaaaaactca tcgtggtaaa aaacattgtt
      301 ggattagcag aattcgaaga aaaattgacc gcttacttta accaataacg gagatgttat
      361 atggaatcgc tactcttttt tatattagat attctcaaag tgccttccgt tctagtgggt
      421 ttaattgctc tggtcggttt agttgcacag aaaaaatcgg tatccgatat tgttaaagga
      481 acaatcaaaa ctattttagg cttcttagtg ttaagcggtg gtgcaacagt acttttaagc
      541 tccctgactc ctttaggcgg tatgtttgaa cacgccttca acgtgcaagg cattatccct
      601 aataacgaag cgattgtgtc tatggcaatc gaaaaatatg gtacggcgac tgcgttaatt
      661 atggcattcg gtatggtagc caatatttta attgcacgtt ttacccgcct aaaattcatt
      721 ttcttaaccg gacaccatac cttctatatg gcgtgtatga tcggcgtaat cctaaccgtt
      781 gccggctttg aaggtattca gctcgtcttt gtcggggcat taaccttagg gttaattatg
      841 tttcccgact atcgctcact tctatatgaa aaaagtgacc gctagcaatg atgttgcctt
      901 aggtcatttc ggcacattgg gctacgtgct tgctggttca atcgggcaac tggtaggaaa
      961 aggctctaaa tctaccgaag aaatggattt acctaaaaac ctcggcttct tacgtgatag
     1021 ctccatttct atttcactca cgatgatggc gatttactat attctcgccc ttgcttcggg
     1081 cagtgaatac gtttctacat taagcggcgg acaacattat ttagtgtatg ccaccattca
     1141 agccatcact tttgcagccg gtgtttatgt cattttgcaa ggggttcgtt taattttagc
     1201 cgagatcgtc ccggcattta ccggcttctc cgaaaaatta gtacctgatg ccaaaccggc
     1261 tctcgactgc ccgattgttt tcccttacgc ccccaatgcg gtattagttg gatttcttgc
     1321 cagtttctta ggtgggattt taagcttagc cattctaggg caacttaatt gggtgttaat
     1381 tttaccgggc gtagtgccac acttcttctg tggggcaact gccggcgtat ttgggaacgc
     1441 caccggcggg cgtcgtggtg caattatcgg tgcttttatt cacggcatat taattacctt
     1501 cttgcctgta ttcttattac ctgtactggg ttcattaggc tttgctaaca ccactttctc
     1561 tgactcagac ttcggcggta ttgggattgt gttaggctat atggctcaat acttcgacaa
     1621 gaatatcatt acgctcatta ttgtcggctt attcgctctg ttggtagcct ataattattt
     1681 ggcgaaaaaa ccggcaaaac tgaataccta attaaaatca ggtgttattt gctgcctgcg
     1741 aggaatcttc cctgccattt cttgatggta gggaattttg tttagttaaa cgacaacgct
     1801 cttgttcaat acccattatc catcacatac cccccactca cttgtttaat cacaccggct
     1861 aattccagac ccagtaattc aaccagcaat atttcaatcg tcaactccgt aactttggct
     1921 aaatcatcaa ttgccatcgg ctctaagctg atatgctgat aaatttgctg ctggcaagcg
     1981 gtcagacttg gcagattttt tgcgaatttt tcgctgtttt tgaccgcttg taaagatgtg
     2041 cttactgttg gcttagactc atcaaacaaa gggatttgct gaggttgata ttgcgaggcg
     2101 accacctcta aaatatcttc cacaccttcc acgagcaatg ccccttcttt aattagcttg
     2161 tggcaacctt gtgcgtaagg gttttgtacc gcattcggta acgcaaacac ttccctacct
     2221 tgttcaaggg cataacgagc ggtaatcagt gaaccactat taagcgttgc ttcaataact
     2281 aaagtgccga gcgataagcc actaataatt cgattacgac gaggaaaatt ttctgccacc
     2341 ggcggctgat taggcgagaa ctccgacacc aatgcaccac ctaaatcaac aatttgttcg
     2401 gctaattttt tatggcgagc aggatagact tgatttaatc cactccctaa cacggcaatc
     2461 gttatgcctt gttccataac gattttttga tgggcaaaac cgtcaatacc aatggctaaa
     2521 ccgctggtaa tgataatatt atggcgagct aattcggcag caaattgccc agcccaatat
     2581 tcaccataat gagaatagtc tcggctgcca acaatcgcaa tttgtggcag agaaaggctt
     2641 tccacatttc cctttacata aattaacggt ggcgcagtcg aaatttgttt taagagaaac
     2701 ggataatttt catcaaagag tgtcacaatt tgctgatttg gcaattctga ccaagtcatc
     2761 gcctgatcaa tccacttttg atcaggatta aaccaacgtt gaatttgctt ttcattccaa
     2821 cctatttgtt tgagttgaag tttgtcatag tggcaaaatt cagcaaaatt gagttccgcc
     2881 aataatcgcc ctatacgttg agcccccatt tgcggcactt gtaataatcg taataaatcg
     2941 tagtgatatg ccatattttc atcctcaaaa tttccctaat aataagaaaa ggtttaaaat
     3001 agccaaacga attttttaaa cttttcgaga gagatcacaa aaatggcaat attagatgtt
     3061 gtgctttacc ccgatgagaa actggcaacc gtttgtgaac cggtggaaca ggtggacgaa
     3121 gcactgaatc gttttatcga tgatatgttt gagacaatgt acgaacacga aggtattggc
     3181 ttagctgcac cgcaagtggg cgtacttaag cgtgttatta ctattgatat tgagggcgac
     3241 aaaaccaatc aagtggtgtt aattaaccct gaaattttag aaagcagcgg tgaaaccggc
     3301 attgaagagg gctgtctctc cattcccggg catcgtgcct tagtgccacg caaagagaaa
     3361 gtgaaagtca aagcccttaa ccgccaaggc gaagaaatta tcatcgatgc cgatgattta
     3421 tttgcgattt gtattcaaca cgaaatcgac catttaaacg gcgtgctttt tgttgaccac
     3481 atatccaatt taaaacgcca acgcatcaaa gaaaaaatgc aaaaattgaa aaagcaaatt
     3541 gcacgagcga aataaccagg cacaagcggt taaaatggct taaaaatttg caaattaagt
     3601 gtgatgacac gataataacc acagttcaac tttagaaagg ataaaaatat gattatcgtc
     3661 accggcggcg caggtatgat tggcagtaac attgttaaag ccttaaatga aatcggtcgc
     3721 aaagatattt tagtagtaga taacctcaaa aacggggaaa aatttatcaa cttagtggac
     3781 ttagatattg cggattattg cgataaagag gatttcatcg cctctattat cgccggcgat
     3841 gattttggtg agattgatgc ggttttccat caaggggctt gctcggcaac caccgaatgg
     3901 gacggcaaat acttaatgca aaataactac gaatattcaa aagagttatt gcatttttgc
     3961 ttagatcgcc aaattccttt cttctatgcc tcaagtgcgg caacctatgg cggacgttcg
     4021 gataatttta tcgagaaacg ggagtttgaa ggtccattaa atgcttatgg ctactccaaa
     4081 ttcctgtttg atgaatatgt ccgccgtatt ttgcctgagg cagaatcacc ggtctgtggt
     4141 ttcaaatatt tcaacgtata cgggcctcgt gagcaacaca aaggttcaat ggcaagcgtg
     4201 gcattccact taaacaacca gatgttaaaa ggggaaaatc caaaactatt tgccggctca
     4261 gagcagttct tgcgtgattt tgtttatgtg gaagatgtgg caaaagtgaa tctttgggcg
     4321 tggcaaaaca gcatttctgg cattttcaac ctcggcaccg gaaaagcgga atctttccaa
     4381 gaagttgcga atgcggttat caaataccac ggcaaaggcg aaattgaaac catcccattc
     4441 ccggatcatt taaaatcccg ctaccaaacg ttcactcaag cggacttaac caacctaaga
     4501 gccgctggct acacaggcac atttaaaacc gttgctgaag gaacagcgga atatatggcg
     4561 tggttgaatc gctaatcaaa cgttgttaaa aaagcagaaa gagctacgaa atgtagctct
     4621 ttttgttata aggttataag gattagaatg ctgtcgtatc ttggaataag cctactttta
     4681 aatcagtagc agtatagatc actcgcccgt ccacttcgac ttcaccatca gcaaccccca
     4741 tcactaactt acgattgacc acacgtttca tatggatacg gtaagtaact tttttcgctg
     4801 tcggtaaaat ttgtccggtg aattttactt cacctacgcc caatgcacgc cctttgcctt
     4861 cgccaccaat ccagccgaga taaaaaccaa ccagttgcca catcgcatct aagcctaagc
     4921 aacccggcat tacaggatcg ttaataaaat ggcagttaaa aaaccataaa tccggtttaa
     4981 tatcaaactc agcttcaata tacccttttt caaaattgcc tttttcttgg ttcatttcaa
     5041 tgatgcgatc catcattaac atcggtggag ccggcaattg aggccctttt tcaccgaata
     5101 attctccttt tcctgatagc aaaagctctt cgtaagtata gcttggtttg ataattggtg
     5161 tacaactgtt cattattttt aaaatcctgt aaagtgaaaa aagcctgtta tatcaataac
     5221 tgataaatca ggctgatagt aacagacttt taattcagtg aacagttgta agctgacttg
     5281 tcggatcagt ctagctttat ctttttgcaa attttgctta aaaatgaacc gcttgtttct
     5341 tcactttccc gctcatctag attctggtga atcaaggtaa ataatgctgt ttgggctgag
     5401 ttaggggctt tctcatcatc ataaaaatcc cgctcaaaca gaatcgctat ggcatcaaac
     5461 acattttcca ccgtccaaat tttaaataga ccttgctcca ctgcctcaac aacttctgaa
     5521 cttaaactca aatggctaac acaggccgcc ggaataatca caccttgttt ccccgttaat
     5581 tggcgagcgt gacaaatatt aaagaagcct tcaattttct gatttacccc gcccacgctt
     5641 agcacattcc caaattgatc gatagcacct gtcaccgcaa tagattgtgg caagccaact
     5701 ttagctaagg cactcactag tacattgaaa atcgcaagag aagaactatc cccatcaatt
     5761 tcaccatagg attgttcaaa agcaatcgaa gctgaaaacg gtaactgggt tggtagttct
     5821 aacagattcg ctaaacaaga ttgagcgata ataatacctt tggagtggat atttccccct
     5881 agctccactt tacgctcaat atctgtaatt tcgccatcac catattgtac attacaactc
     5941 atgcgtaagg gctcgccaaa actatgcgga atgccttcaa actcaatgac cgataagcca
     6001 ttgatctgcc caatttcctc tccttcggtt tcaatataaa gttgattagt cagaatatca
     6061 cccaccgtat attgatttaa tatcgatgat tgctgttcta aataatcaaa ataacctttt
     6121 acctcgtcaa tttcggtcac atttgggtaa aaattttgaa ttcctaataa atgttttctc
     6181 aataatgtag gggaaataga caccaactct cggctttcac tttcacgtat ataggcctgt
     6241 aaaaattgat taagcgctgt ggaagttaat cgcttattga tgagattctc agcataattc
     6301 tgaacataac ctccccactg ctccacatta tccgataatg ataagtagga ttttatttcg
     6361 gtatattgcc caaattggta caacccatca tcataagcag ataaagtaga aatatcttct
     6421 ctttccccta ctaaaatcaa tttaaatgtt gatttctctt tagccgataa atagggtgag
     6481 tgattaacag aatttggctc atattcacca aataataatg cctgttttag cttatcccat
     6541 tgggtaatat ccaataagag cgaacggata ttaacaatta aaattccctt atctgcctcg
     6601 tgaattgcac ctttaacata ttctgttttc agctctcttt ccaaaaacac agaataacca
     6661 aatagactat ttttattgaa atccattttg ctaataatcg gcagatctac actatatttt
     6721 ttcagatatt ccgtgatttc attgataaat tccggaaaaa gctcagattt taagactaat
     6781 aaagcaccaa actgagattg taaaaattga tttaacgctt gttttgcttg aggttgaaaa
     6841 tctaaaaaat tcaatttctc atctaaacga gagaaatcat tttgcattac taatttttgg
     6901 ctactaagta aagaaagggt cacaaatctg cctcattatt gaaaatttgg tttattatac
     6961 aaaattccgc tatacttgct aaatatagct tactttttcc tatcatattc agattatgcg
     7021 atatcagaaa ctcatcaccc aagaaacaac ttggaaatgg caatatctcc taaaaaaaca
     7081 tcgtgaagga gaaaatatta ctaagtacga agaacaaagc ttgatcgatt taaaagttca
     7141 gttcctctct actttgcaaa actctccgga cgaagtggaa aaatggatta agtcggaaat
     7201 gacgcctgag caacgtaaga aaatgcgtca atcagtacgc gccaaacgca aacgcttctt
     7261 taatgctgaa aagcaaacaa ccaagaaaaa atccattgat ttagagtatt cgagctggtt
     7321 aaggctctct aaatatgcca aaagccaaaa actaacgctt tctgaagcta ttgtcaaatt
     7381 aaccgatgaa ctcgaaaata aacaacttta cttagagcaa gttgctaaaa tgaaatcaag
     7441 tttaaaagat ttactgaaat aaaaaaagaa aaaagcccac taacaagcgg gctttttttg
     7501 attcaatttt tcaactgaat aactatatta catagttact tcttttgaac cttgaacttg
     7561 gatttcaaca cgacgatctg gtgctaagca agcgattaat gctttacgac ctttaactgc
     7621 atcacatgtg tgaccagtta ctgggtttgc ttcaccgtaa cctacagctg ttacattagc
     7681 tgggttagta cctttagaaa cgatgtaatt agctactgtt tcagcacgac gttgtgaaag
     7741 ttttaagtta gatgcttctt taccgatgcg gtctgtgtaa ccattaactt ggatagctag
     7801 gtttgctaag cctaagttgc tgatttcagc gtgtgctgca tctaaagaag ttgctgctgc
     7861 tggttttaag cttgatttac cgaaatcaaa taaaacatca gagctgaatg cgaagttttt
     7921 agttacaact tctggtgctt caactggtgc tgcaccttga ccgaaacggt atgataaacc
     7981 tgcagatact gagtggatat ctgggctgta ttggaaattt gtacctcttg gtattagata
     8041 accaactgtt gtacgaactg ccttatctaa gttaccaaca cgatttaagt attgatattc
     8101 aacacgagca gctaattcag gagtaattgc atactcaaga ccagcaccta ataatagaga
     8161 tggttttaag ttgtgaactt taatgcgtga atctttatct acatgttgtt gtacgtagta
     8221 atcgttgcga actaatgcaa cacctacttt accgtaaaca tctaagttag gaacaacttc
     8281 gtagcttggt tttaagctta agtgcgcacc gtgagctgaa tgtttagccg cagttttttc
     8341 tttatcatca ccagaaaatg tagtgttacc acgaacacga ccaaagtagt cataacctaa
     8401 ttctgtcgct aaaccaaagt tgttttggtt taagatttgg taaccaccga atacaccgta
     8461 agttacagag ttacggttaa taccgaggtt aataccgagg ttaataccgg atccataatc
     8521 atatgtgttg tcaaattgag ttaaaccgtc gtggaatgat gcccaaccag ctttagcacc
     8581 tgcgtagaaa gtgttagctt gtggagctgc ttgagctact gcagctgctg ataatactgc
     8641 taatgcaact aatgtttttt tcattttgat gatcctctta aatattgtca tcgattaaaa
     8701 taaattctta atacccacaa aaagtattaa aactttaact ttatgcttca acatta
//
LOCUS       DANLXD010000101         8632 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.101, whole genome shotgun sequence.
ACCESSION   DANLXD010000101 DANLXD010000000
VERSION     DANLXD010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8632)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8632)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8632
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.101"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(32..418)
                     /gene="rplQ"
                     /locus_tag="PXD18_002076"
     CDS             complement(32..418)
                     /gene="rplQ"
                     /locus_tag="PXD18_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HDL6302465.1"
                     /translation="MRHRKSGRQLNRNSSHRQAMFRNMASALVEHEIIKTTLPKAKEL
                     RRVVEPLITLAKADSVANRRLAFARTRNVDTVAKLFNELGPRFAQRAGGYTRILKCGF
                     RAGDNAPMAYIELVDRPEVATEAAAE"
     gene            complement(454..1443)
                     /gene="rpoA"
                     /locus_tag="PXD18_002077"
     CDS             complement(454..1443)
                     /gene="rpoA"
                     /locus_tag="PXD18_002077"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HDL6302466.1"
                     /translation="MQGSVTEFLKPHLVNIEQVSSTHAKVTLEPLERGFGHTLGNALR
                     RILLSSMPGCAVTEVEIDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDIILTL
                     NKSGIGPVTAADITHDGDVEIVNPDHVICHLTDKNASINMRIRVQRGRGYVPASARLH
                     TQNDDRPIGRLLVDARFSPVDRIAYNVEAARVEQRTDLDKLVIEMETNGTLDPEEAIR
                     RAATILAEQLAAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAETIH
                     YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIAED"
     gene            complement(1474..2100)
                     /gene="rpsD"
                     /locus_tag="PXD18_002078"
     CDS             complement(1474..2100)
                     /gene="rpsD"
                     /locus_tag="PXD18_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HDL6302467.1"
                     /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIESKCRNRLDVAPGQHG
                     ARKPRLSDYGSQLREKQKVRRIYGILERQFRNYYTEANRLKGNTGENLLVLLEGRLDN
                     VVYRMGFAATRAEARQLVSHKSIVVNGRVVNIPSFQVSVDDVVAVREKSKKQARIKAS
                     LELATQREKPTWLEVDATKMEGVFKRRPERSDLSADINEHLIVELYSK"
     gene            complement(2129..2518)
                     /gene="rpsK"
                     /locus_tag="PXD18_002079"
     CDS             complement(2129..2518)
                     /gene="rpsK"
                     /locus_tag="PXD18_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HDL6302468.1"
                     /translation="MAKTPVRARKRVKKQIADGVAHIHASFNNTIVTITDRQGNALAW
                     ATAGGSGFRGSRKSTPFAAQVAAERCAEMVKEFGLKNLEVMVKGPGPGRESTIRALNA
                     AGFRITNITDVTPIPHNGCRPPKKRRV"
     gene            complement(2535..2891)
                     /gene="rpsM"
                     /locus_tag="PXD18_002080"
     CDS             complement(2535..2891)
                     /gene="rpsM"
                     /locus_tag="PXD18_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019935869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HDL6302469.1"
                     /translation="MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAATGIAEDVK
                     IRELSEEQIEKLREEVGKFTVEGDLRREVTLSIKRLLDLGCYRGLRHRRSLPVRGQRT
                     KTNARTRKGPRKPIKK"
     gene            complement(3029..3142)
                     /gene="rpmJ"
                     /locus_tag="PXD18_002081"
     CDS             complement(3029..3142)
                     /gene="rpmJ"
                     /locus_tag="PXD18_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HDL6302470.1"
                     /translation="MKVRASVKRMCRNCKVIKREGVVRVICSDPKHKQRQG"
     gene            complement(3167..4486)
                     /gene="secY"
                     /locus_tag="PXD18_002082"
     CDS             complement(3167..4486)
                     /gene="secY"
                     /locus_tag="PXD18_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HDL6302471.1"
                     /translation="MAKQPGYQGSTQKGTGELKSRLLFVLGALIVFRIGSFIPVPGID
                     ASVLSELIRQQQGTIIDMFNMFSGGALSRASIFALGIMPYISASIIIQLLTAIHPPLA
                     ELKKEGEAGRRKISKYTRYGTLLLAFIQSIGISLALPNMVHGLVPNPSILFYVTSVVS
                     LVTGTMFLMWLGEQITERGIGNGISLIIFTGIVADLPATIGQTIEQARQGELSFIVLL
                     LVAIIAFAVTYFVVFVERGQRRIVVNYASRQQGRMMAPARTSHLPLKVNMAGVIPAIF
                     ASSIILFPASITQWFGQSEGFEWLFNLSQLLQPGQPLYVVLFTMAVIFFAFFYTGMQY
                     NPRDTADNLKKSGAFVPGYRPGEQTSRYIDKVMTRLTLIGALYIAFVCLVPYIITSLW
                     KVPFQLGGTSLLIVVVVIMDFIAQVQSHLMSQQYDSVLKKANLKGLN"
     gene            complement(4489..4923)
                     /gene="rplO"
                     /locus_tag="PXD18_002083"
     CDS             complement(4489..4923)
                     /gene="rplO"
                     /locus_tag="PXD18_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011095501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HDL6302472.1"
                     /translation="MRLNSLSPAEGAKHSAKRLGRGIGSGLGKTGGRGHKGQKSRTGG
                     GVRRGFEGGQMPLYRRLPKFGFTSLKSFHVAEIRLNDLAKVDGNEVTLETLKAANIIT
                     KDILSAKVILAGKIERAVVVKGLRVTKGAKAAIEAAGGSIEE"
     gene            complement(4928..5104)
                     /gene="rpmD"
                     /locus_tag="PXD18_002084"
     CDS             complement(4928..5104)
                     /gene="rpmD"
                     /locus_tag="PXD18_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HDL6302473.1"
                     /translation="MAKIKVTQTRSSIARLPKHKATLKGLGLRHIRHTVELEDTPAVR
                     GMINQVSYMVKVEE"
     gene            complement(5111..5611)
                     /gene="rpsE"
                     /locus_tag="PXD18_002085"
     CDS             complement(5111..5611)
                     /gene="rpsE"
                     /locus_tag="PXD18_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004106339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HDL6302474.1"
                     /translation="MSNIEKQAGELQEKLIAVNRVSKTVKGGRIMSFTALTVVGDGNG
                     RVGFGHGKAREVPAAIQKAMEKARRNMINVALNEGTLQHPVKGSHTGSRVFMQPASEG
                     TGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALENMKSPEMVAAKRGKT
                     VEEILG"
     gene            complement(5626..5979)
                     /gene="rplR"
                     /locus_tag="PXD18_002086"
     CDS             complement(5626..5979)
                     /gene="rplR"
                     /locus_tag="PXD18_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HDL6302475.1"
                     /translation="MDKKVARIRRASRARHLMREQGATRLVVHRTPRHIYAQVIAPNG
                     SEVLAAASTVEKVIKEQVKYTGNKEAAAVVGKIVAERAIAKGIKAVAFDRSGFKYHGR
                     VQSLADAAREAGLQF"
     gene            complement(5994..6527)
                     /gene="rplF"
                     /locus_tag="PXD18_002087"
     CDS             complement(5994..6527)
                     /gene="rplF"
                     /locus_tag="PXD18_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HDL6302476.1"
                     /translation="MSRVAKAPVNIPAGVEVKLNGQLLTVKGKNGELSREIHNAVEVK
                     QEADALTFAPREGIANADAQAGTARALVNNMVIGVTEGFTKKLQLVGVGYRAQMKGNA
                     VALSLGFSHPVEHTLPAGVTGECPSQTEIILKSADKQLIGQVAADIRAYRKPEPYKGK
                     GVRYSDEVVRTKEAKKK"
     gene            complement(6544..6936)
                     /gene="rpsH"
                     /locus_tag="PXD18_002088"
     CDS             complement(6544..6936)
                     /gene="rpsH"
                     /locus_tag="PXD18_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HDL6302477.1"
                     /translation="MSMQDPIADMLTRIRNGQAANKVAISMPSSKLKVAIANVLAEEG
                     YIESVKVVEGVKPELEITLKYFQNKPVVESIQRVSRPGLRIYKRKDELPKVMGGLGIA
                     VVSTSKGVMTDRAARQAGLGGEIICYVA"
     gene            complement(6973..7278)
                     /gene="rpsN"
                     /locus_tag="PXD18_002089"
     CDS             complement(6973..7278)
                     /gene="rpsN"
                     /locus_tag="PXD18_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HDL6302478.1"
                     /translation="MAKQSMIARDVKRAKLADKFYAKREELKKIISDVNASDEDRWAA
                     VLKLQTLPRDSSPIRQRNRCRQTGRPHGVLRKFGLSRIKVREAAMRGEIPGLKKASW"
     gene            complement(7290..7829)
                     /gene="rplE"
                     /locus_tag="PXD18_002090"
     CDS             complement(7290..7829)
                     /gene="rplE"
                     /locus_tag="PXD18_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HDL6302479.1"
                     /translation="MAKLHDYYRDTVVNELKAKFNYSSVMQVPRIEKITLNMGVGEAL
                     TDKKLLDNAVADLAAISGQKPLVTKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFER
                     LITIAVPRIRDFRGLNAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTSA
                     KTDEEGQALLAAFNFPFRK"
     gene            complement(7847..8158)
                     /gene="rplX"
                     /locus_tag="PXD18_002091"
     CDS             complement(7847..8158)
                     /gene="rplX"
                     /locus_tag="PXD18_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000729185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HDL6302480.1"
                     /translation="MAAKIRQNDEVIVLTGKDKGKRGKVTKVLPNGKVFVEGINIITK
                     HEKPVPALGKAGGLVKKEAAIDVSNVAIFNPETNKADRVGFRFEDGKKVRFFKSNEKT
                     I"
     gene            complement(8169..8540)
                     /gene="rplN"
                     /locus_tag="PXD18_002092"
     CDS             complement(8169..8540)
                     /gene="rplN"
                     /locus_tag="PXD18_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012728338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HDL6302481.1"
                     /translation="MIQEQTMLDVADNSGARSVMCIKVLGGSHRRYAAIGDIIKVTVK
                     EAIPRGKVKKGDVLKAVVVRTKKGVRRPDGAVIRFDGNACVILNNNTEQPIGTRIFGP
                     VTRELRSEKFMKIISLAPEVL"
BASE COUNT         2479 a         1929 c         1559 g         2665 t
ORIGIN      
        1 accagggttt taagctcaat tttgattaag attattccgc agctgcttca gttgcaactt
       61 ctgggcgatc cactaactca atgtaagcca ttggagcatt atcacctgca cggaaaccac
      121 attttaaaat gcgagtgtaa ccacccgcac gttgtgcaaa acgtggacct aattcattga
      181 ataatttagc aactgtatca acgttgcgtg tacgggcaaa agctaaacgg cgatttgcaa
      241 cgctgtctgc tttagctaaa gtaattaacg gctcaactac acggcgtaac tctttcgctt
      301 ttggtaaagt tgtcttgatg atttcgtgtt caacaagcgc acttgccata ttacggaaca
      361 tcgcttggcg atggctgctg ttacggttta attgacgtcc actcttacga tggcgcataa
      421 cctattcctt cttagaaaat ctataccgaa aaactagtct tctgcaatac ttgcaggtgg
      481 ccagttttca aggcgcatac cgagtgataa accacgagaa gcaagaacat ccttaatctc
      541 tgtaagagat tttttaccca agttcggggt tttaagaagt tcaacttctg tacgttgtac
      601 taaatcaccg atatagtgaa ttgtctctgc tttcaaacag ttagcagaac gaactgtcag
      661 ctctaggtca tctactggac gaagaagaat aggatcaaat tccggttttt cttctttcac
      721 ttcaggttga cgaacatcac gcaaatcaac gaatgcagca agttgttctg ctaaaatcgt
      781 tgcagcacga cggatagctt cttcaggatc taacgttccg ttagtttcca tctcaataac
      841 aagtttatct aagtctgtac gttgttcaac acgagcagct tcgacattgt aagcaatgcg
      901 atctacaggt gaaaaacgtg catctactaa taaacgaccg atagggcggt catcgttttg
      961 agtatgaaga cgtgctgatg caggaacata acctcgacca cgttgaacac gaatgcgcat
     1021 attaattgat gcattcttat ctgttaaatg acagattacg tgatcaggat tcacaatttc
     1081 tacatcgcca tcgtgtgtga tgtcggctgc agttacaggg ccaattccag atttatttag
     1141 tgtcaaaata atatcatctt tattttgcac ttttaccgct agacctttaa ggtttaataa
     1201 tacctcaaga atatcttcct gaacgccttc tttgctgctg tactcatgca gtacaccatc
     1261 aatttcaact tcagtaactg cacaacccgg catagatgaa agtaaaatgc ggcgaagtgc
     1321 gttacctaat gtatggccaa aaccacgctc taacggctct aatgtcactt tagcatgagt
     1381 tgaactaact tgttcaatat ttactaagtg cggctttaaa aattctgtca cagaaccctg
     1441 cattttttcc tctctttgcg gttaagctaa ctattattta gagtaaagct caacgatcag
     1501 atgttcatta atatctgctg atagatcaga acgctctgga cgacgtttaa atacgccttc
     1561 cattttagtt gcatcaactt ctaaccaagt tggtttttca cgttgagttg ctaattctaa
     1621 tgatgcttta atacgtgctt gttttttcga tttttcacga acagcaacaa catcatcaac
     1681 agaaacttgg aatgaaggaa tgtttactac acgaccgttt actacgattg atttatggct
     1741 aacaagctga cgtgcttctg cacgtgttgc tgcaaaaccc atacgataaa ctacgttatc
     1801 taaacgacct tccaataata ctagtaagtt ttcaccggta ttacctttta agcggttcgc
     1861 ttctgtataa taattacgga attgacgctc taagatacca taaatacggc gaactttttg
     1921 tttttcacgt aattgactac catagtcaga taaacgtggc ttgcgagcac catgttgacc
     1981 aggcgctaca tcaagtctat ttctacattt tgattcaatc gcacgaacgc ctgattttaa
     2041 gaataaatca gtaccttcac gacggcttag cttgagctta ggacccaaat atcttgccat
     2101 tttctttctc caattctttt aacgtcaatt aaacacgacg ttttttcggt ggacgacaac
     2161 cgttatgtgg aatcggagtc acatcagtaa tattcgtgat acggaaacct gctgcattta
     2221 atgcacggat tgttgactca cgacctggac ccggtccttt aaccataact tccaaattct
     2281 ttaaaccaaa ctctttaacc atttctgcac aacgctctgc agcaacttga gcagcgaatg
     2341 gagtcgattt acgagaacca cggaaacctg aaccacctgc agttgcccaa gctagagcat
     2401 taccttgacg gtcagtaata gtaacgattg tgttattgaa agatgcgtgg atatgagcta
     2461 cgccatctgc aatctgtttt tttacgcgct tacgtgcgcg aactggtgtt ttagccatta
     2521 tttatctact ccgactattt tttgatcggt ttgcgtggac ctttacgggt acgcgcatta
     2581 gtcttagtac gttgaccacg taccggtaaa ctacgacgat gacgtaaacc acggtagcaa
     2641 cctaagtcta aaagacgttt gatgcttaaa gttacttcac gacgtaaatc cccttcgaca
     2701 gtaaatttac caacttcttc acgcagtttt tcaatctgct cttcagacaa ttctctgatc
     2761 tttacatctt cagcaatacc cgttgcagca cagatggctt ttgcacgagt tttaccgata
     2821 ccgtaaattg cagttaatgc gattacagtg tgtttttgat caggaatgtt aatgcctgca
     2881 atacgggcca ctatgcactc ctattattta agtttattga tatactgatc ttgaaaagcc
     2941 cgtttcagga tactcaaaca gtatatcagg acgaatgagc tgagcagtat aactgctcag
     3001 cgggttcttt gcaagaaata tgcgtaaatt aaccttgacg ttgtttgtgt ttaggatcgc
     3061 tacaaattac acgaaccaca ccttcacgtt tgattacttt acaattacgg cacattcttt
     3121 ttactgaagc acgaactttc attgcttatc ctttattaac ggcctattaa tttagacctt
     3181 ttaagttagc tttcttcaac acagaatcat attgttgaga cattaaatga ctctgaacct
     3241 gtgcgatgaa atccataata acaaccacta caatcaataa tgatgtacca cctaattgga
     3301 atggcacctt ccataacgac gtaatgatgt aaggaaccaa acaaacaaaa gcaatatata
     3361 acgcaccaat taaggttaaa cgtgtcatta ctttatcgat ataacgagat gtttgttcgc
     3421 ctggtcggta acctggtaca aacgcacctg atttcttaag attatccgct gtatcacgag
     3481 gattatactg cattcctgta taaaagaaag caaagaaaat cactgccatt gtgaataata
     3541 caacatacag tggttgacct ggctgtaata gttgtgaaag gttaaataac cactcaaatc
     3601 cttcgctttg accaaaccat tgagtaatgc ttgccgggaa taaaataata cttgaagcaa
     3661 aaattgccgg tattacccct gccatattca cttttaatgg taagtgagaa gttcttgcag
     3721 gcgccatcat tcgaccttgt tggcgacttg catagtttac aactattctt ctttgtccac
     3781 gttcaacaaa aacaacaaaa taagttactg caaatgcaat tattgcaact agtagtaaga
     3841 cgataaatga taactcgcct tgacgggctt gttctattgt ctgccctatc gttgctggaa
     3901 gatctgcaac aatacctgta aaaataatca atgagatacc gtttccgata ccacgctcag
     3961 tgatttgttc gcctagccac attaggaaca ttgttcctgt cactaagctt actacagagg
     4021 ttacatagaa taatatactt ggattaggaa ctaatccatg taccatattc ggtagggcta
     4081 gtgaaatacc aatagattga ataaatgcta ataacagtgt gccatagcgt gtatatttac
     4141 tgattttccg acgacctgct tcaccttctt tctttaattc agctagaggt gggtgaatcg
     4201 ctgtcaataa ttggataata attgacgctg aaatataagg cataatacct agtgcaaata
     4261 tagatgcacg gcttaaagca ccaccagaga acatattaaa catatcaatg atggtgcctt
     4321 gctgttgtcg aattaattcg gataatacag aagcatcaat gccaggaaca ggtataaaag
     4381 aaccgatacg gaaaacgatt aacgcaccta aaacaaacaa tagtcttgat ttaagctcgc
     4441 cagtcccttt ttgtgtacta ccttggtacc ctggttgctt tgccatcttt attcctcgat
     4501 agaaccgcca gcagcttcaa tagcagcttt agcgccttta gttacacgta agcctttaac
     4561 aactactgct ctttcaattt tgcctgctaa aattacttta gcagataaaa tatctttagt
     4621 aatgatgttt gctgctttta atgtctctaa agttacttcg ttgccatcta ctttagctaa
     4681 gtcgtttaaa cgaatttcag ccacatggaa tgattttaat gaagtaaaac caaattttgg
     4741 caaacgacga tataaaggca tttgaccacc ctcgaaacca cgacgaacac cgccgcctgt
     4801 acgagatttt tgacctttat gaccgcgccc accagtttta cctaaaccag aaccaatacc
     4861 acgacctaga cgttttgcac tgtgcttagc accttcagct ggagaaagag aatttaaacg
     4921 cattctatta ctcctctact ttaaccatat aagacacttg attgatcata ccacgcactg
     4981 ctggtgtatc ttcaagttct acagtatgac gaatatgacg aagacctaag ccttttaacg
     5041 ttgctttatg tttcggtaaa cgagcgatag agctacgagt ttgagttact ttaatttttg
     5101 ccatatccaa ttaccccaaa atttcttcaa ctgttttgcc acgttttgca gcaaccattt
     5161 caggtgattt catgttctca agtgcatcga ttgttgcacg aacaacgtta attgggttag
     5221 ttgaaccata cgctttagaa agaacgttac gaacacccgc aacttctaat actgcacgca
     5281 ttgcaccacc agcgatgata cctgtacctt cacttgctgg ttgcataaat acgcgtgaac
     5341 ctgtatgtga acctttaact ggatgttgta atgtaccttc atttaaagct acattaatca
     5401 tattgcgacg agctttttcc atcgcttttt ggattgctgc tggaacttca cgtgctttac
     5461 cgtgaccaaa acctacacga ccgttaccat cgcccactac tgttaaagca gtgaaactca
     5521 taatacgacc accttttacg gtttttgaaa cacggttaac cgcgattagc ttttcctgca
     5581 gttcaccagc ttgtttttcg atgtttgaca tctcaaattc ctctattaga actgtagacc
     5641 agcttcacga gcagcatctg ctaatgattg cacacgaccg tggtatttaa aaccagaacg
     5701 gtcaaaagca accgctttaa tacctttggc aattgcacgc tcagcaacga ttttacccac
     5761 tactgctgcg gcttctttat tgccggtata tttaacttgc tctttaatta ctttttcaac
     5821 agttgaagct gctgctagta cttctgagcc attaggtgca atcacctgcg catagatatg
     5881 gcgaggtgtg cgatgcacaa ctaaacgtgt tgcaccttgc tctctcatta aatgacgtgc
     5941 acggcttgca cgacggatac gagctacttt cttatccata gtgttacctt actttacttt
     6001 ttcttcgctt cttttgtacg cactacttca tcagagtaac gtacaccttt acctttataa
     6061 ggttcaggtt tgcgatatgc acgaatatct gctgccactt gaccaattaa ctgtttgtca
     6121 gcacttttca gaataatttc tgtttgtgat ggacattcac cagttacgcc tgctggcaac
     6181 gtgtgttcta ctgggtgaga gaaacctaaa cttaaagcaa cagcattgcc tttcatttgt
     6241 gctctataac caacacccac taattgcaat ttcttagtaa agccttcagt aaccccgatt
     6301 accatattat ttactagtgc acgagcagta cctgcttgag catctgcatt agcgatacct
     6361 tcacgtggag cgaaagttaa tgcatctgct tcttgtttta cttcaactgc attgtgaatt
     6421 tcacgagata actcgccgtt tttaccttta actgttaata gctgaccgtt aagttttacc
     6481 tcaacaccgg caggaatatt aacaggtgct tttgcaacac gagacatttt tcctacctct
     6541 ctattatgct acgtaacaga taatttcacc gccgaggccc gcttgacgcg cagcacggtc
     6601 ggtcattaca cctttagatg tagaaacaac tgcgatacct aaaccaccca ttacttttgg
     6661 taattcgtct ttgcgtttat aaatacgcag acccggacgg ctcacacgtt ggatactttc
     6721 tacaaccggt ttgttttgga aatattttaa agtaatttcc agttcaggtt taacaccttc
     6781 aacaacttta acgctttcga tataaccttc ttcagctaaa acatttgcaa tagcaacttt
     6841 taacttagat gaaggcatac tgattgcaac tttgttcgca gcttgaccgt tacgaatacg
     6901 ggtcagcata tctgcgattg gatcttgcat gctcatgtat ttactcccat gattccaaat
     6961 taaaagaggt tattaccagc ttgccttctt aagacccgga atttcaccgc gcatagcagc
     7021 ttcacgaacc ttaatacggc ttaaaccaaa cttacgaagt acgccatgtg gacgaccagt
     7081 ttggcggcaa cgattacgct gacggattgg gctagaatca cgaggaagtg tttgtaattt
     7141 taacactgct gcccaacggt cttcatcaga tgcattcaca tcagagatga ttttctttaa
     7201 ttcttcacgt tttgcgtaga atttatcagc taatttagca cgttttacat cgcgtgcgat
     7261 cattgattgt tttgccacga taacctacct tatttacgga atgggaaatt gaaagcagct
     7321 aataaagctt gaccttcttc atcagttttc gctgaggtgg tgatagtaat atctaaacca
     7381 cgaacacgat ctactttatc gtagtcgatt tcagggaaaa tgatttgttc acgaacaccc
     7441 atactgtaat taccacgacc atcgaatgac ttagcgttta aaccgcggaa gtcacgaata
     7501 cgtggaacag cgatagtaat caatctttca aagaattccc acatacgttc accacgtagg
     7561 gttactttgc aaccgattgg atacccttga cggattttaa agcctgcaac agatttgcga
     7621 gctttagtta ctaaaggttt ttgaccgctg attgctgcta aatccgctac tgcgttatct
     7681 aacagttttt tgtcggtcaa tgcttcaccc acacccatgt taagggtaat cttttcgatt
     7741 cgtgggactt gcatgacaga tgagtagttg aattttgctt ttaattcatt aactactgta
     7801 tctctgtagt aatcatgcag tttcgccatc acattactcc agttaattaa attgttttct
     7861 cgttagattt gaagaaacgc acttttttgc catcttcgaa tctaaatcct acacggtcag
     7921 ctttgttggt ttcagggttg aagatcgcaa cgtttgaaac atcgattgca gcttctttct
     7981 tcactaaacc accagctttg cctaatgcag gaactggttt ttcgtgttta gtgatgatgt
     8041 tgataccctc aacaaaaact ttaccatttg gtaacacttt agttacctta ccacgtttgc
     8101 ccttatcttt accggtaaga acaattactt catcgttttg acggattttt gcagccatta
     8161 cattctcctt atagtacttc tggagctaaa gagatgattt tcataaactt ctcagaacga
     8221 agttcacgag tcaccggtcc aaaaatacga gtaccgattg gttgctcagt gttattgttt
     8281 aaaattacac aagcattgcc atcgaaacga ataactgcgc catctgggcg acgaacaccc
     8341 ttcttggtgc gcacaacaac tgcttttaac acatcacctt ttttcacttt accgcgtgga
     8401 attgcttctt ttacagtaac tttaatgata tcgccaatag cagcgtaacg acggtgcgat
     8461 ccacctagaa ccttgataca cattacgcta cgagcccctg agttatcagc aacatccagc
     8521 atagtctgtt cttggatcat attagtgctc cgttaaaata aaaaaacacc ctttcgggac
     8581 gaacctattt atacaaatat aaatagggtg caaaatatac tacaaaaacc ac
//
LOCUS       DANLXD010000102         8314 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.102, whole genome shotgun sequence.
ACCESSION   DANLXD010000102 DANLXD010000000
VERSION     DANLXD010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8314
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.102"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(107..1471)
                     /gene="mpl"
                     /locus_tag="PXD18_002093"
     CDS             complement(107..1471)
                     /gene="mpl"
                     /locus_tag="PXD18_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HDL6302482.1"
                     /translation="MKKHIHILGICGTFMGGVAMIARELGYKVTGSDTNVYPPMSTFL
                     AAHGIEIIPNYDVAQLQPAPDLVVIGNAMSRGNPCVEYVLDNQLNYTSGPQWLHDHLL
                     KDKWVLAVSGTHGKTTTTGMLAWILDQNGIDTGFLIGGVAGNFGISARAGNSPFFVIE
                     ADEYDSAFFDKRSKFVHYTPKTLIINNMEFDHADIFDDLKAIQRQFHHLVRTMPQSGC
                     ILSAIADQNVQDTLKMGSYSQLQFIGEQNEWFAKPLNADCSQFEVFHLGVKQGEVHWS
                     IIGKHNMHNALMAIAAAHHAGVEVQGACEALGKFVNANRRLEVKGEVNGITVYDDFAH
                     HPTAIEATIDALRGKVGKNQRILAVLEPRSNTMKMGVHKDEIAPSLHDAEAVFVYQPD
                     IIAWSVSEITNVLSQPAYWSANIDDLVDLVVKEAKPTDHILVMSNGAFGGIHQKLLAK
                     LADK"
     gene            complement(1767..2522)
                     /locus_tag="PXD18_002094"
     CDS             complement(1767..2522)
                     /locus_tag="PXD18_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HDL6302483.1"
                     /translation="MKLKSFKPMFMLLSVAFLTACSSSINPETGVRDDPLEGFNRAMW
                     KVNYDYLDPYVLKPVAKGWKEYVPSPVKTGLINVANNLDEPVSFVNRLIEGEGKKAMV
                     HFNRFWINTVFGLGGLIDWASLDEGLRLNNGQRGLGESLGAHGVPSGSYIMMPAYGAT
                     TPRQGIGSAVETGYSVLTYVGSPWSIAKFVVQGVDTRSKLLEQDALLEQAQDPYVTFR
                     EAYFQNLEFKVKDGNVEQSQQEQLSEEELKNID"
     gene            2677..2994
                     /gene="metJ"
                     /locus_tag="PXD18_002095"
     CDS             2677..2994
                     /gene="metJ"
                     /locus_tag="PXD18_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="met regulon transcriptional regulator MetJ"
                     /protein_id="HDL6302484.1"
                     /translation="MADWNGEYISPYAEHGKKSEQVKKVTVSIPIKVLEILTNERTRR
                     QIKNLRHATNSELLCEAFLHAFTGQPLPNDEDLMKDRADEIPEAAKQKMCELGIDPDE
                     WQY"
     gene            3042..3272
                     /locus_tag="PXD18_002096"
     CDS             3042..3272
                     /locus_tag="PXD18_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF997 family protein"
                     /protein_id="HDL6302485.1"
                     /translation="MYQQLTTEARWAVLLTLIYLLGWVGFAYFSPQGRGIFGFPIWFE
                     LSCIFLPVLFSLVATIVVKKVYKNIDLEVNNE"
     gene            3265..4689
                     /gene="panF"
                     /locus_tag="PXD18_002097"
     CDS             3265..4689
                     /gene="panF"
                     /locus_tag="PXD18_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/pantothenate symporter"
                     /protein_id="HDL6302486.1"
                     /translation="MNSEMILPLIAYLIFVFGVAFYAYRKRQGGSFISEYYIGGRSMS
                     GFVLAMTTAATYVGASSFIGGPGAAYKYGLGWVLLAMIQVPAVLLSLGALGKKFALLA
                     RKHNSVTINDMLLARYQNKFVVWIAGLALLLSFFAMMTVQFIGAGRLLETTLGIPYQT
                     AVMIFAITVGLYTFIGGFRAVVLTDTIQGLVMIVGTSILLAGVIYATGGVENAMHTLE
                     AINPQLTTPYGIDERPLDFTFMTSFWVLVCFGLIGLPHIAVRSMACKNSQALHRAMII
                     GTVVIAILMFGMHLSGVLGRAVVPDLKVPDQVIPTLMVQVLPPVVAGIFLAAPMAAIM
                     SSIDSMLIQSSSTLIKDLYLAIKPNAINNEKKIKLFSTITTLTFTVLLVFAALTPPEM
                     LIWLNLLSLGGLEATFLWVIVLGLYWEKANATGAIYSMLAGLSCYVLMTTFKIAIFSF
                     HAIVPSLLIGLIAFLIGNRFAPKV"
     gene            complement(4766..5956)
                     /gene="nhaA"
                     /locus_tag="PXD18_002098"
     CDS             complement(4766..5956)
                     /gene="nhaA"
                     /locus_tag="PXD18_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDL6302487.1"
                     /translation="MEKLKEFLKSEASGGVLLLVFAFAAIVCANTSLSDFYFEFLQTI
                     VSVQFGEFALNKPLLLWVNDGLMAVFFTLVGLEVKKELFEGSLSSYKKAIFPAIAAVG
                     GMIVPAIIYWAINQNHPEYHNGWAIPMATDIAFAVGIVALLGTRVPLALKAFLLALAI
                     IDDLGAIVVIAIFYSQEISVQALTIAAIAIIGLVLLNRFKVTSLCAYLVVGLVLWTSV
                     LKSGVHATLAGVIIGFCVPLKGKHGERPAEELEHILAPWCAYMILPIFAFANAGVYLL
                     EMGMEQLSSPLPLGIALGLIIGKTLGVFGFSYLAVLFRLASLPQGVNFKQIFAIAVLC
                     GIGFTMSMFLASLAFDVSEAGESITALARLGILLGSAVSAILGYTLLRMATKQNNPEN
                     NATY"
     gene            6124..6552
                     /locus_tag="PXD18_002099"
     CDS             6124..6552
                     /locus_tag="PXD18_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDL6302488.1"
                     /translation="MTHDWLYWALASALFAALTAIFAKVGLQGVDSDFATFIRTVVII
                     IALIAFLTYSGKWQPLDSLSSKNWLFLILSGLATGLSWSAYFKALQMGNASQVAPIDK
                     FSLVLVTLFAVIFLGERPSGQDWLGIGLVAGGVLLLAFKR"
     gene            6558..7280
                     /locus_tag="PXD18_002100"
     CDS             6558..7280
                     /locus_tag="PXD18_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HDL6302489.1"
                     /translation="MQNFANIEIAFIHRKAPLPSDFSYPEMPGGLTEKQVQKWQSRRV
                     AFFLLTELFKKHHLDLDLLADMQRSPSGRTFVDSEQIDFNISHSGEWIAVIFSYSFAK
                     LAVGIDIEHPQKIRRYHDLICHYGNAEEQNVLLANHSPILSNLAERFYLSWCLREAIL
                     KSQGVGIVKLSEVKHLPLEKQIFSAHCPKGKLHFVSELPFYLSYFYQQPQNMLLSEPL
                     LYHWQNGQFQPIKCQSLVYDVN"
     gene            7290..7709
                     /gene="psiE"
                     /locus_tag="PXD18_002101"
     CDS             7290..7709
                     /gene="psiE"
                     /locus_tag="PXD18_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate-starvation-inducible protein PsiE"
                     /protein_id="HDL6302490.1"
                     /translation="MPKKSLEEHHSSFGKIASETFQWIMNIALLVTGALLSYSLFAEA
                     YSLYELSFSDSEKFQIVEKIVIFFLYFEFLALIVKYFKSNYHFPLRYFLYIGITAMVR
                     LIIVDHSNALHTLLFALSILVMIIALYIVHTDRLHKS"
     gene            7718..>8314
                     /locus_tag="PXD18_002102"
     CDS             7718..>8314
                     /locus_tag="PXD18_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDL6302491.1"
                     /translation="MKLTQYQHNDLQILNRETVYKGHFELQKITFRHKLFSGEMSGEV
                     VRELLIKGEAAALIAYDPTLDKVVLIEQVRIGAYDAGQKKSPWLLELVAGMVDKGNEE
                     PAEVAMREAKEEAGLEVTTVQHALSVWDSPGGQLERLHLFLGLIDSTQVKSGEVHGLL
                     EEENEDILVHVVSREQAYQWVEDGTIDNVIAVIGLQWLQ"
BASE COUNT         2386 a         1823 c         1699 g         2406 t
ORIGIN      
        1 tataaatatc cagaattgat tttgaatttt tcgatgcaga tcacaaaaat agagagttat
       61 acaaacaagc ggtaaaattt tgtaaaaaat ttaccgcttg taaaggttac ttatcagcta
      121 atttggcaag tagtttttga tgaataccgc caaaggctcc gttgctcatc actaagatgt
      181 gatcggtggg tttggcttct ttgacgacta gatcgactaa atcatcaata tttgccgacc
      241 aatacgccgg ttgcgataac acattggtaa tctcgctcac actccacgca ataatatcag
      301 gctggtaaac aaacactgct tcggcatcgt gtaggcttgg ggctatttca tctttatgga
      361 cacccatttt cattgtattt gaacgaggct ctaacactgc caaaatgcgt tgatttttgc
      421 cgactttacc acgcagagca tcaatagtcg cttctatcgc agttgggtgg tgagcgaaat
      481 catcataaac ggtaatgccg tttacctcgc ctttcacttc caaacggcgg ttagcattca
      541 caaacttgcc taatgcctcg caagcccctt gcacttcaac ccctgcgtga tgagcggcgg
      601 caatcgccat cagagcatta tgcatattgt gcttgccgat aatcgaccaa tgcacctcgc
      661 cttgtttaac gcctaagtga aacacctcaa actgtgagca atcggcattt aacggtttag
      721 caaaccattc gttctgttcg ccaataaatt gaagctggct gtaactgccc atttttagtg
      781 tatcttgcac gttttgatca gcgattgccg acaaaataca gccactttgt ggcatcgtgc
      841 gaacaaggtg gtggaactgg cgttgaatcg cttttaaatc atcaaaaata tcggcgtggt
      901 caaattccat attattgata atcagcgttt tcggggtgta atgcacaaat ttagaacgct
      961 tatcaaagaa cgcagaatcg tactcgtccg cctcaatcac gaagaatgga ctgttaccgg
     1021 cacgagccga aatgccgaaa ttaccggcaa caccgccaat taaaaagccg gtatcaatcc
     1081 cattttggtc taaaatccac gctaacattc ctgttgtggt agttttgccg tgcgtgccgg
     1141 aaaccgccag cacccatttg tctttaagca aatgatcgtg caaccattgc gggccggagg
     1201 tgtaattgag ttggttgtcc aacacatatt ccacgcacgg attaccacgg ctcatcgcat
     1261 taccaatcac cactaaatca ggagccggtt gcagttgagc aacatcgtaa ttcgggataa
     1321 tttcaatacc gtgagcagct aaaaaggtac tcatcggtgg gtaaacatta gtgtctgagc
     1381 cggtcacttt atagccaagc tcacgggcaa tcattgccac accgcccata aaggtgccgc
     1441 aaatgcctaa aatatggata tgttttttca tctttttata tttaaaatgt tagaatcatc
     1501 ccctctcccc ttgtgggaga gggatagatt ttttcttcgt gcagaagaaa aaatcaggga
     1561 gaggggtaag cggtcatttt taggcttaat attgtaagct ccctctctct gaaaaatatt
     1621 tctgaacgaa atatttttcg gtctcaatac tcgctacgct cgctcctgtg gagccgttgg
     1681 caaagccaac gttcaaatgt aaacatttgt cccacaaggg gagaggtgcg ctttagatga
     1741 ggcgtaccat ccctcgttca catcaattaa tcaatattct tcaactcttc ttccgaaagc
     1801 tgctcttgtt ggctttgctc aacattgcca tctttcactt taaattcaag gttttggaaa
     1861 taagcttcac ggaaggtaac ataagggtct tgagcttgct ctaacaacgc atcttgttct
     1921 aataatttag aacgggtatc taccccttgt accacaaatt tagcgataga ccaaggtgac
     1981 ccaacataag tcagcaccga ataaccggtt tccaccgcac taccaatacc ttgacgaggt
     2041 gtggttgctc cataagccgg catcataata taggagccgg aaggcacgcc gtgagcgcct
     2101 aaactctcac ctaaaccacg ttgtccgtta tttaaacgta acccctcatc taaactcgcc
     2161 cagtcaatta acccacctaa accaaacaca gtgttgatcc agaagcggtt gaagtgaacc
     2221 atcgcttttt taccttctcc ttcaattaag cggtttacaa agctcaccgg ctcatcaagg
     2281 ttattagcaa cattaattaa gcctgtttta accgggcttg gtacatactc tttccaacct
     2341 ttagctaccg gttttaacac ataagggtct aaatagtcgt aattgacttt ccacatcgca
     2401 cggttaaacc cctcaagtgg gtcgtctcgc acgccggttt ctgggttaat gcttgatgaa
     2461 caagcggtta aaaatgccac actgagtagc ataaacatcg gtttgaacga cttgagtttc
     2521 ataaattgaa ccttttgcag agaaatttgt ccattgtagc gaagttgata aaaaatacaa
     2581 aacaaaaagc cgttttgcct ctagaaatct agacgtctag attgagatat agttcgcttt
     2641 tgattacaat acaggcaaca tttaaggagc aaacaaatgg cagactggaa cggcgaatat
     2701 attagccctt atgccgaaca cggcaaaaaa agtgaacaag tcaaaaaagt gacggtatcc
     2761 attccaatta aagtattgga aattttaact aatgagcgaa cccgtcgcca aatcaaaaat
     2821 cttcgtcacg caaccaacag cgaattattg tgcgaggctt ttttgcacgc ctttaccggt
     2881 cagcctttgc cgaatgatga agacttgatg aaagacaggg cagatgaaat ccctgaagcg
     2941 gcaaaacaaa aaatgtgtga gctgggaata gacccggacg aatggcaata ttagacacac
     3001 cttgcaactg cgaggttctt tttatgtttt aaggagactt tatgtatcaa caattaacaa
     3061 cagaagcacg ttgggctgtg ttgcttacgc tgatttatct gctcggctgg gtaggttttg
     3121 cttacttttc accgcaaggc agaggcattt tcggctttcc gatttggttt gaactttctt
     3181 gcattttctt acccgtacta tttagcttag ttgccaccat tgtcgtcaaa aaagtgtata
     3241 aaaatatcga tcttgaggtg aataatgaat agtgaaatga ttttacccct gattgcttat
     3301 ttaatttttg tgtttggcgt agcgttttat gcttaccgta aacgccaagg cggaagcttt
     3361 atttcggaat actatatcgg tgggcgttca atgtcgggct ttgtgttagc aatgacaacc
     3421 gccgccactt atgtgggggc aagttccttt atcggtgggc cgggtgctgc ctataaatac
     3481 ggtttaggct gggtgttact ggcaatgatt caagtgcccg cagtgctact ctctcttgga
     3541 gcattaggca aaaaatttgc cttacttgcc cgcaagcata atagtgtcac cattaacgat
     3601 atgttattag cccgttacca aaacaaattt gtggtttgga ttgcaggact agccttatta
     3661 ctttcgtttt ttgcgatgat gacggtgcaa tttatcggtg ccggtcgctt acttgaaacc
     3721 acactcggaa tcccttacca aacagcggta atgatttttg ccatcacagt cgggctttat
     3781 acctttatcg gcggttttag agcggtggtg ctaaccgata ctattcaagg tttagtaatg
     3841 atagtcggca caagcatttt actcgctggt gtgatttatg ccacaggcgg agtggaaaat
     3901 gcaatgcaca cccttgaagc cattaaccca caacttacca ccccttacgg cattgacgaa
     3961 cgcccgcttg atttcacctt tatgacttca ttttgggtat tggtttgctt tggtttaatc
     4021 ggcttaccgc atattgcggt cagaagtatg gcatgcaaaa acagccaagc cttgcaccga
     4081 gcaatgatta tcggcacggt agtcattgca attctaatgt ttggaatgca cctttcaggc
     4141 gtattaggca gagcggttgt gcctgatctc aaagtgccgg atcaagtcat tccaacacta
     4201 atggtacaag tgctaccacc ggtggttgcc ggtattttcc ttgccgcccc aatggcagcg
     4261 attatgtctt cgattgactc aatgttgatt cagtcgtctt caaccttaat taaagatctc
     4321 tatctggcaa ttaagccgaa tgccattaat aacgagaaaa aaatcaaatt gttctccact
     4381 attactactc ttacttttac ggtattactc gtgtttgccg ccctaacccc gcctgagatg
     4441 ttaatttggc tgaacctact ctctttaggt ggtttagaag cgactttcct atgggtaatt
     4501 gtactagggt tgtattggga aaaggcaaat gccaccggtg ctatttactc aatgctggca
     4561 ggcttaagtt gttatgtatt aatgactacc tttaagattg ctatttttag cttccacgcc
     4621 attgtgcctt cactgctaat tggtttgatt gctttcttaa tcggcaaccg atttgctcct
     4681 aaggtgtaaa ataaaatagg catagtggta tggaagttca ctatgcctat tttgcaaaat
     4741 ttccgctcaa ttcaaccgct tgtagttaat aagtggcatt attttctgga ttattctgct
     4801 tagtcgccat tctaagtaac gtataaccta aaatcgctga aaccgcagag ccgagtaaaa
     4861 tacctaatcg agctagagcg gtaatacttt ccccagcctc acttacatca aaggcaagac
     4921 ttgctaagaa catcgacatt gtaaaaccga taccgcatag caccgcaatg gcaaaaattt
     4981 gcttaaaatt aaccccttgc ggcaggctgg caaggcggaa taatactgct aaataactaa
     5041 aaccgaatac acctaaggtt ttgccgataa ttaagccgag cgcaatacct aacggcaatg
     5101 gtgatgagag ttgctccatt cccatttcta ataagtaaac gccggcatta gcgaaggcga
     5161 agatcggtaa aatcatataa gcacaccaag gggcaagaat atgttctagc tcctctgccg
     5221 gtcgttcccc atgtttacct ttcagcggta cgcagaagcc gatgatcacg ccggcaaggg
     5281 tagcgtgaac ccctgatttt aaaacggaag tccatagcac taagcctact accaaataag
     5341 cacagagtga ggtcacttta aagcggttaa gtagcactaa gccgataatc gcaatcgcgg
     5401 caatagttaa ggcttgcaca ctgatttctt gcgaatagaa aatggcgatt accacaatcg
     5461 ctcctagatc atcaataatc gctaatgcca acaaaaatgc ctttaaagcc aatggcacac
     5521 gagtgcctaa taacgccaca atgcccaccg caaaggcaat atcagttgcc attggaattg
     5581 cccaaccatt atgatattca gggtggtttt gattaatcgc ccaataaata atcgctggaa
     5641 caatcatacc acctactgct gctatcgcag gaaaaatagc tttcttataa cttgaaagcg
     5701 aaccttcaaa caactctttt tttacttcca gccccaccaa cgtaaaaaac actgccatta
     5761 agccatcgtt aacccagagt aatagcggtt tattcaaggc aaattcacca aactgtacac
     5821 taacaatcgt ttgtaaaaac tcaaaataga aatcacttaa ggaggtgttg gcgcacacaa
     5881 ttgctgcaaa agcaaaaacc agaagcaata cgcctcctga ggcttcagat tttaaaaatt
     5941 cttttaattt ttccacttaa ctttctccta ttaatatttg tttattgtat tttcatttct
     6001 atacattcca tcttttacca aaaattttgc gaagatcaaa tagaaaattt gataaactag
     6061 aactaactcg cattttattg ctccatatga ttagaaatta acctaaaata ttaaaatttt
     6121 gttatgacac acgattggct ctattgggca ttagcctctg cactttttgc agcattaacc
     6181 gccatttttg ccaaagttgg cttacaaggc gtagattctg atttcgccac ttttattcgc
     6241 acggtagtta ttattattgc acttattgcc tttctcactt acagcggaaa atggcagccg
     6301 ttagatagct tgagcagcaa aaactggctg tttttaatct tatccggctt ggcaacagga
     6361 ttgtcttggt cggcgtattt caaagcattg caaatgggta atgcttccca agtcgctcca
     6421 atcgataaat tcagcttggt gttagttacc ctttttgcag taattttctt aggcgaacgc
     6481 ccaagcggac aagattggct tggcattggc ttagttgctg gtggcgtact gttacttgcc
     6541 ttcaagcggt gatttttatg caaaattttg caaatattga aattgcgttt attcatcgga
     6601 aagcacctct gccgagtgat ttctcctacc ctgaaatgcc cggcggttta actgaaaaac
     6661 aggtgcaaaa atggcaaagc cgccgagtcg ccttttttct gctgacggaa ttgtttaaaa
     6721 aacaccatct ggatttagat ttattagctg atatgcaacg ctccccaagc ggtcgcactt
     6781 ttgtcgattc tgagcaaatt gactttaaca tcagccattc aggggaatgg atagcggtca
     6841 ttttttcgta ttcttttgca aaattagcgg tcggcattga tattgaacac ccacaaaaaa
     6901 tcagacgtta ccacgattta atctgccatt acggaaacgc tgaagaacaa aatgttttat
     6961 tagccaacca ctcccccatt ctaagcaacc tcgccgaacg cttttatttg agctggtgct
     7021 tgcgagaggc gatattgaaa tcgcaagggg tggggattgt gaaactgtcc gaagtaaaac
     7081 atttaccgtt agaaaaacag atcttttccg cccattgtcc gaaaggcaag ctgcattttg
     7141 tgagcgaact gccgttctat ttaagctact tctatcaaca acctcaaaat atgctattat
     7201 ctgaaccttt gctataccat tggcaaaacg ggcagtttca gcctataaag tgccaatcac
     7261 ttgtttatga tgttaattaa ggataacgaa tgcctaaaaa atctttagaa gaacaccatt
     7321 ccagttttgg caaaattgct tccgaaacct ttcagtggat tatgaatatt gccttgctag
     7381 taacaggagc attgctttct tactcgctgt ttgctgaagc ctattcactc tatgaacttt
     7441 cctttagcga cagtgagaaa ttccaaattg tagaaaaaat agtaattttc tttctctatt
     7501 ttgagtttct tgcgttgatt gtgaaatatt tcaaatcgaa ttatcacttt ccgttacgct
     7561 atttcctcta tatcgggatt actgccatgg tgcgtttgat tattgtcgat cattctaatg
     7621 cgttgcatac actattattc gcactctcta ttttggtgat gattatagca ttatatattg
     7681 tacacaccga tcgtttacat aaaagctagg aactaatatg aagctaaccc aatatcagca
     7741 caatgattta cagattctaa accgagaaac cgtctataaa gggcattttg agctacaaaa
     7801 aatcactttc cgccataagc tgttttccgg tgaaatgagc ggtgaagtgg tgcgtgaact
     7861 cttaattaaa ggcgaagcgg cggctttaat tgcctatgat ccaaccttag ataaggtagt
     7921 attaattgag caagtgcgga ttggagctta cgatgcagga cagaaaaaat ccccttggtt
     7981 gctggaattg gttgccggta tggtagataa aggcaacgaa gagccggcag aagtggcaat
     8041 gcgtgaagcc aaagaagaag ccggcttgga agtcacaaca gtgcaacacg ccttaagcgt
     8101 atgggacagt cccggtggac aactggaacg cttgcacctg tttctcggct tgattgacag
     8161 cacccaagtg aaatccggcg aggtacacgg cttactggaa gaagaaaatg aagacatttt
     8221 ggttcacgtt gtaagccgtg aacaggcata tcaatgggta gaagacggca caattgacaa
     8281 tgtgattgcg gtaattgggc tacaatggtt gcaa
//
LOCUS       DANLXD010000103         8198 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.103, whole genome shotgun sequence.
ACCESSION   DANLXD010000103 DANLXD010000000
VERSION     DANLXD010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8198
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.103"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..1358
                     /gene="nhaC"
                     /locus_tag="PXD18_002103"
     CDS             <1..1358
                     /gene="nhaC"
                     /locus_tag="PXD18_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HDL6302492.1"
                     /translation="PMTAVILSLLTVFILGFTMIGLGWVPQISILAVIVMLLLFGLIN
                     KIPFKNMQEGMASGLMSSIGAVYLFFFIGLLVSALMMSGAIPTLMYYGLSVISPELFY
                     ISAFALSSVVGIALGSSLTTTATIGVAFIGMASAFGANPAIVAGAVVSGAFFGDKTSP
                     LSDTTTIAASVVGIDMFAHIRNMLYTTIPAWILTALFLWFLTEPTDAQNLANIENLKT
                     NLQETGLIHGYSLLPFVTLILMAIKRVNSIYIIVTTVTLSLIITYIHSSPTLEQLGNY
                     FFTSYKPVEGVDLGEVASLVSRGGINSMFFTITIVLLALSLGGLLQILGILPALLNGI
                     SGFLTSTGRVTLVVASTAVGINVLIGEQYLSLLLSGNTFRSTYERLGLEVKNLSRTIE
                     DAGTVINPLVPWGVCGVFISSVLNVPVLDYLPYAFFCYICLILTLIFGFTGVTISKKA
                     N"
     gene            complement(1401..2597)
                     /gene="ispC"
                     /locus_tag="PXD18_002104"
     CDS             complement(1401..2597)
                     /gene="ispC"
                     /locus_tag="PXD18_002104"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HDL6302493.1"
                     /translation="MKKLVILGSTGSIGKSTLSVVEHNPNPNQYEVFALVGGKNVELM
                     LEQCRQYQPTFAAMDDEKSAQALKTALATLGSKTEVLAGQAAICELAAHSEVDMVMAA
                     IVGAAGLLPTLSAVKAGKTVLLANKESLVTCGQIFIDEARKSGAKLLPVDSEHNAIFQ
                     SLPPEAQQKVGFCPLAELGVSKIILTGSGGPFRTKPLNEFDAITPAQAVAHPNWSMGK
                     KISVDSATMMNKGLEYIEARWLFNATAEEMDIIIHPQSIIHSMVRYIDGSVIAQMGNP
                     DMCTPIAHTMAYPNRINAGVPPLDFFKLKELTFIEPDFARYPNLKLAIEAFAEGQYAT
                     TAMNAANEIAVEAFLNEQIRFTDIVNVNRTVVENIAPIQVSEIADVLHIDKLARELAK
                     QAVLQL"
     gene            complement(2716..4914)
                     /gene="relA"
                     /locus_tag="PXD18_002105"
     CDS             complement(2716..4914)
                     /gene="relA"
                     /locus_tag="PXD18_002105"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP diphosphokinase"
                     /protein_id="HDL6302494.1"
                     /translation="MVAIRYSHQLEPNNFELSSWCASLNMSPVTFEQIHNAWSYAQEK
                     LDTDYSLMWYGIEMVEVLHGLNMDDDSLVAAMLFPLVKHNVIDLVQLKEDFSNDIKNL
                     VKGVLEMENIRQLSANNVSDLQIDNIRRMLLAMVDDFRCVVIKLAERIAYLRDSNHHS
                     EEDTVLAAKECSHVYAPLANRLGIGQLKWELEDYCFRILHPVSYTQIAKFELGERRVD
                     RERYIANFVADLTACLSPEIKNVQIYGRPKHIYSIWKKMQKKRLRFNQLFDIRAVRVI
                     VPTLEDCYTALGIIHTKYTHLPEHFDDYIANPKPNGYQSIHTVVLGEGEKTIEVQIRT
                     QQMHDDAELGVAAHWKYKEGATAGRSGYEEKIVWLRKLLEWQNDLADSGDMVAEMRSQ
                     IFDDRVYVFTPRGEVIDLPQKATPLDFAYAIHSEIGHRCIGAKVAGRIVPFTYHLQMG
                     DQVEIITQKEPNPSRDWLNPNTGFVNTGKARSKIIAWFKKLDREKNIPIGKEALEAEM
                     EKFGFTLKQIEEYALPRYNLKQFDDLYAGIGGGDIRLHQLMHFLQSKLIKPTAEQEDE
                     AVLKQVNKNTNQPKPSKGYVIVEGVGNLMHSIARCCQPIPGDEIVGYITQGRGISIHR
                     ADCEQLFELQSLNPERVVEADWGEGYTSGLSLTIRVIANDRNGLLRDVSAIMANEKVN
                     VLGVSSRTDVKRSLATIDMEIQLNNVEILNKLLARIAQLDDVIEAKRLSS"
     gene            5168..6475
                     /locus_tag="PXD18_002106"
     CDS             5168..6475
                     /locus_tag="PXD18_002106"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDL6302495.1"
                     /translation="MTILALGINHKTASVGLREKVAFVDDKRKLALEQIQTSGLAESV
                     VILSTCNRTELYFHQPNISPREESEENIQWREQCFRWFAQIHQLDESELRECLYFKQN
                     LEAANHLMKVASGLDSLILGEPQILGQVKQAYQYSEDFYQHQQKAMSTKLSRLFQRTF
                     ATAKRVRSETEIGSQAVSVAYAACGLARQIFDNFGKLRFLLVGAGETIELVARYLIQH
                     GAKNIMLANRTHIRAEMLAEKLNAPMQILSLSALQLGLNQADVVISSTGSPDTLISKE
                     MVEIAQKQRQFDPLLLIDIAVPRDIDEKAGDLEGVYAYSVDDLQNIIQRNMAQREEAA
                     KQAAEIVKEESKAFFEWLKQQQSSDLIKRYRQDAEQTRQELLEKALQAISQGQDSQKV
                     LSELSYKLTNQLLHAPTQALQAMAKSGNSTGLQSFSRALRLEE"
     gene            6660..8195
                     /gene="der"
                     /locus_tag="PXD18_002107"
     CDS             6660..8195
                     /gene="der"
                     /locus_tag="PXD18_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HDL6302496.1"
                     /translation="MTPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGH
                     ANIAGYDFIVIDTGGIDGTEEGVEEKMAEQSLLAIEEADVVLFLVDARAGLLPADVGI
                     AQYLRQREKTTVVVANKTDGIDADSHCAEFYQLGLGEVEQIAAAQGRGVTQLIEQVLA
                     PLGEQLNAEQFNQEQAGENAKNVANEETDEWDTEFDFENEEDAALLDEALAEEAEESI
                     EDKNIKIAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQQYTIID
                     TAGVRKRGKVNLAVEKFSVIKTLQAIQDANVVLLTIEAREGISDQDLSLLGFILNAGR
                     SLVIVVNKWDGLSQDIKDQVKSELDRRLDFIDFARVHFISALHGSGVGNLFDSVKEAY
                     ACATQKTSTSMLTRILRMAADEHQPPLVNGRRVKLKYAHPGGYNPPIIVIHGNQVEKL
                     ADSYKRYLSNYFRKSLKIIGSPIRILFQEGNNPFAGKKNKLTPSQLRKRKRLMKFIKK
                     SKK"
BASE COUNT         2321 a         1791 c         1671 g         2415 t
ORIGIN      
        1 aaccaatgac agcggtcata ctttcgcttt tgacggtctt tatcttaggt tttacaatga
       61 ttgggcttgg ctgggtgcct caaatttcaa ttctagccgt gattgtaatg ctgctacttt
      121 tcggcttaat caataaaatt ccgtttaaaa atatgcaaga gggtatggca agcgggctga
      181 tgtccagtat tggtgcggtt tacctattct tttttattgg attattggtt tcagctttga
      241 tgatgtctgg tgcgattcca accttaatgt attatggctt aagtgtgatt tcacctgaat
      301 tattttacat ttctgcattc gcattaagtt ctgtagtagg tattgcgtta ggcagtagtt
      361 taaccacaac cgccaccatc ggtgttgctt ttatcggtat ggcttctgct ttcggtgcga
      421 accctgcgat tgtagcaggt gcggtggttt caggggcgtt ttttggcgat aaaacctctc
      481 cactttcaga cactactacc attgctgctt ccgtagtggg cattgatatg ttcgctcata
      541 tccgtaatat gctttatacc accatccctg cgtggatttt aacagcatta ttcctttggt
      601 ttttaaccga acctactgat gcacaaaatt tagcaaatat agagaaccta aaaaccaatt
      661 tgcaagaaac aggattaata cacggctact ctttgctacc ttttgttacg ttaattttaa
      721 tggcaattaa gcgtgttaat tcaatttata ttattgtaac tacagtaaca ctctcgctaa
      781 ttattaccta tatccacagt tcgccaaccc ttgaacagct agggaattat ttctttacca
      841 gctataaacc tgttgaaggc gtagatttag gcgaagtggc atcattagtc tctcgtggtg
      901 gcattaatag tatgttcttt accatcacta ttgtattgct tgcgttaagt ttaggtggtc
      961 ttttacaaat cctcggcatt ttaccggcac tacttaacgg cattagcggc tttttaacca
     1021 gcacaggacg tgttactctt gtagttgcca gcactgcggt gggaattaac gtcttaatcg
     1081 gtgagcaata tttgagctta ttgttatcag gtaatacttt ccgctcaact tatgaacgtt
     1141 taggcttaga agtgaaaaac ttatctcgca ccattgaaga tgcaggcacg gtaatcaacc
     1201 cattagtccc ttggggcgtg tgcggtgtgt ttatcagtag cgtattaaat gtaccggtgt
     1261 tagattatct accatacgca ttcttctgtt atatctgttt aatccttacc ttaatttttg
     1321 gatttaccgg ggtaacaatc agtaaaaaag ctaactaata tgtgaaaaat gcctacaaat
     1381 ttgtaggcat tttcttttca ttagagctga agaacagctt gtttggctaa ctctctggcg
     1441 agtttatcaa tatgcaatac atcagcaatt tcactgactt gaattggagc aatattttcc
     1501 accaccgttc tattcacgtt cacaatatcc gtaaagcgga tttgctcgtt taaaaacgcc
     1561 tcaacggcaa tttcattggc ggcattcatc gctgttgtcg catactgtcc ttctgcaaaa
     1621 gcctcaatcg ctaattttaa gttcgggtaa cgggcaaaat ccggctcgat aaaggttagc
     1681 tcttttaatt taaagaaatc taatggtggc acaccagcat taattcggtt tggatatgcc
     1741 atcgtgtgag caatcggcgt acacatatcc gggttgccca tttgagcaat caccgagcca
     1801 tcaatataac gcaccatcga atgaataatt gattgtgggt gaatgatgat atccatttcc
     1861 tcggctgttg cattaaacaa ccagcgggct tcaatatact ccaagccttt gttcatcatt
     1921 gtggctgaat cgactgaaat tttcttaccc atagaccaat tggggtgagc aactgcttga
     1981 gccggtgtaa tcgcatcaaa ttcatttaat ggcttagtac ggaacggtcc acccgatcct
     2041 gttaaaataa ttttactgac acccagttca gcgagtggac aaaacccgac tttttgctgt
     2101 gcctccggtg gaagcgattg gaaaatcgca ttgtgttcac tatctaccgg taagagcttc
     2161 gcaccggatt tacgagcctc atcaataaaa atttgcccac aggttaccag cgattcttta
     2221 tttgccaaca atacggtttt acccgctttc accgcagaaa gtgtcggtaa taaccctgct
     2281 gctcctacaa tagcagccat taccatatcc acttcggaat gtgcagcaag ctcacaaata
     2341 gctgcttgac cggctaacac ttcagtttta gaccccaaag ttgccaatgc cgtttttaat
     2401 gcttgtgcgg atttttcatc atccattgcc gcaaaagtcg gctgatattg acgacattgc
     2461 tccagcatta attcaacatt ctttccacca actaacgcaa acacctcata ttggtttggg
     2521 tttgggttat gctcaactac cgataaagtg cttttaccga tagaacctgt tgaacctaaa
     2581 atcactaatt ttttcatttt gtttctcttt atctaatgac tgataagggc gaaagatttt
     2641 tcgcccctac gccgtaatta tgcggatact cattcgttgt ttgtaaattg tttagcaaaa
     2701 acaaccgctt gtagattaac tcgaaagccg ttttgcttcg ataacatcat ctaattgagc
     2761 gatacgagcc aataatttat tcaaaatttc aacgttgtta agctgaattt ccatatcaat
     2821 ggtggcaagg ctacgtttca catcggttcg gctggaaacg cctaacacgt ttactttttc
     2881 atttgccata attgcactga catctcgcag taagccgttg cggtcattgg caatcactcg
     2941 aatggttaag cttaaaccag aggtatagcc ttcgccccaa tccgcctcca caactcgttc
     3001 tgggttgaga ctttgtaatt caaacagttg ctcacaatct gcacggtgaa tcgaaatccc
     3061 tctgccttgt gtgatgtaac ccacgatttc atcacccgga atcggctggc agcaacgggc
     3121 aatggaatgc attaagttcc ctacgccctc tacaatcaca tagcctttgc ttggcttcgg
     3181 ctgattggtg tttttattca cctgtttaag taccgcttcg tcttcttgtt cggcggtcgg
     3241 tttaattaat tttgattgca agaagtgcat taactgatga agacgaatat cgccaccgcc
     3301 aataccggca tagagatcat caaactgttt taagttatag cgaggcagag catattcttc
     3361 aatttgcttg agcgtaaaac cgaatttttc catttcggct tcaagggcct ctttgccgat
     3421 tggaatattt ttctctcggt ctaatttttt aaaccacgca ataatttttg agcgagcttt
     3481 gcctgtattc acaaaaccgg tattcggatt gagccaatct cggcttgggt tcggctcttt
     3541 ttgggtgata atttcaacct gatcgcccat ttgcagatga taagtaaacg gcacaatccg
     3601 ccctgccact tttgctccaa tgcaacgatg cccgatttca ctatgaattg cataagcaaa
     3661 atcaagtggt gtagcttttt gcggtaaatc gatcacctcg cctcttgggg taaagacata
     3721 aacacgatca tcaaaaattt gcgaacgcat ttctgccacc atatcgcctg aatcggcaag
     3781 atcgttttgc cactcaagca atttgcgtag ccacacgatt ttttcttcgt agcccgaacg
     3841 ccctgcggtt gccccctctt tatatttcca gtgagcggct acgcctagct ccgcatcatc
     3901 gtgcatttgc tgggtacgaa tttgcacttc aatcgttttt tcaccttcgc ctaatacaac
     3961 tgtatgaata gactgataac cgttaggttt tgggttagca atataatcat cgaaatgttc
     4021 cggcaaatgg gtatatttgg tgtgaataat gcctaatgcc gtgtagcaat cttctaacgt
     4081 tggcactatt acccgcacag cccgaatatc gaaaagctga ttaaatctca accgtttttt
     4141 ctgcattttc ttccaaatgc tgtagatatg tttcgggcgt ccataaatct gcacattctt
     4201 gatttcagga cttaaacaag cggtcagatc tgctacaaaa tttgcaatat aacgctcacg
     4261 atccacacgg cgttcgccca attcaaattt agcaatttga gtgtaagaga cagggtgtaa
     4321 aatgcggaaa cagtaatctt ccagctccca tttgagctgc ccgataccca atcgattggc
     4381 aagcggtgca taaacgtgag aacattcttt agcggcgaga acggtatctt cttcggaatg
     4441 gtggttacta tcacgcaggt aggcaattcg ttcggcaagt ttaatcacca cacagcggaa
     4501 atcgtccacc atcgccaaca acatgcgacg gatattgtcg atttgcagat ccgacacatt
     4561 attggcacta agctggcgga tattctccat ttcgagtacg cctttaacta agtttttgat
     4621 gtcgttactg aaatcttctt ttaattgcac caagtcgatc acattgtgtt ttaccagagg
     4681 aaaaagcatt gcggcaacta agctgtcatc gtccatattc aagccgtgca atacttcaac
     4741 catctcaatg ccataccaca tcagactata gtcggtatcc agtttttcct gtgcataact
     4801 ccacgcattg tgaatctgct caaaagtcac aggagacata ttcaggcttg cacaccaact
     4861 cgacaactca aaattattcg gttcaagttg atgggaataa cgaattgcta ccataaggcc
     4921 tccttgtaaa tttttgtgga aattagaccg cttgtacagc ttaaaatgga gttttattat
     4981 acgtggaaat tcagaaaaaa tttaccccta atcgaaaatt taatccaagt tatcttatcc
     5041 tctttactcc ttaagaggta gcaaccttgt gataaatcaa acctatcaac acaatcattt
     5101 gcacgacttc acgctcttga ttaaaatact tgcgttttta ttttgatctt tatttttgtg
     5161 ggtagcaatg acaattttag ctttaggaat caaccataaa accgcctctg tgggtttaag
     5221 agagaaagtg gcgtttgtag atgacaaacg taaactggct cttgaacaaa tccaaacgag
     5281 cggattggct gaaagcgtgg tcattctctc tacctgcaac cgcaccgagc tctacttcca
     5341 ccagcctaat atttctcccc gtgaagagag cgaggaaaat atccaatggc gtgaacaatg
     5401 tttccgctgg tttgcccaaa ttcatcaact tgatgaaagc gagttgcgtg aatgtttata
     5461 ttttaaacaa aatttagaag ccgctaacca cttaatgaaa gtggcaagcg gattagattc
     5521 actaatttta ggcgaaccac aaattttagg gcaggttaaa caagcctatc aatatagcga
     5581 agatttctac caacatcagc aaaaagcgat gtccaccaag ctatcacgct tgttccaacg
     5641 cacctttgcc accgcaaaac gagtacgttc cgaaaccgaa atcggcagcc aagcggtgtc
     5701 agttgcttat gcagcttgcg gtttagcccg tcaaattttc gataattttg gcaagttacg
     5761 ctttttgctg gtaggggcag gcgaaaccat tgaattagtc gcccgctatt taattcaaca
     5821 cggggcgaaa aatataatgt tggcaaaccg cacccatatt cgggcggaaa tgttggcgga
     5881 aaaactaaac gctccaatgc aaattctgtc gttaagtgct ttgcaactcg gtttaaacca
     5941 agctgatgta gttattagct ccaccggtag ccctgatacc ctaatcagta aagaaatggt
     6001 ggaaattgcg caaaaacaac gccaatttga cccacttttg ctgattgata ttgccgttcc
     6061 tcgtgatatt gacgaaaaag ccggcgactt agagggcgtt tacgcttata gtgttgatga
     6121 tttacaaaat attatccaac gcaatatggc tcagcgtgaa gaagccgcca aacaagccgc
     6181 tgaaatcgtc aaagaggaaa gcaaagcatt ttttgaatgg ttaaaacaac agcagtctag
     6241 tgatttaatc aaacgctatc gtcaagatgc ggagcaaacc cgccaagaat tgttggagaa
     6301 agccctacaa gcaatcagtc aagggcaaga cagccaaaaa gtattaagtg agctaagcta
     6361 caaactcacc aaccagttac tacacgcccc aacccaagcg ttacaagcaa tggcaaaaag
     6421 tggcaactcc accggcttac aaagtttttc aagagcatta cggctagaag aatgatgctc
     6481 agcacattct tttaggcata tttgcaaaaa attgaacatt tttaaccgct tgcggacgca
     6541 cgccgtgcgt ccctccccgt gttcccgatc ttcttctaat ttcaacttcc ccaaatttcc
     6601 gctataataa gccaattttt gcaactattt tgcaaataac cggatataga ggatacaaaa
     6661 tgactcctgt tgttgcccta gtgggcagac ctaatgtcgg caaatcgact ttatttaacc
     6721 gtttaacccg tactcgagat gccttagtag cagatttccc cggcttaacc cgagaccgta
     6781 aatatggtca cgctaatatt gccggctacg atttcattgt aatcgacacc ggtggtattg
     6841 atggtacaga ggaaggcgtg gaagaaaaaa tggcggaaca atctttattg gcgattgaag
     6901 aagccgatgt ggtgcttttc ttggttgatg cccgagccgg attattacct gccgatgtcg
     6961 gcattgctca atatttacgc caacgtgaaa aaaccacggt ggtggttgcc aataaaaccg
     7021 atggtattga tgccgactct cactgtgccg aattctatca attaggctta ggcgaagtag
     7081 aacaaattgc tgcagcacaa gggcgtgggg ttacgcagct tatcgagcaa gtgttagctc
     7141 ctttaggcga acagctaaat gccgagcaat ttaaccaaga acaagcgggc gaaaatgcta
     7201 aaaatgttgc aaatgaagaa acagacgaat gggataccga attcgacttt gagaacgaag
     7261 aagatgcggc attattagat gaagccttgg cagaagaagc agaagagtcg attgaagata
     7321 aaaatatcaa aattgcgatt gtcggtcgtc cgaatgttgg taaatcaaca ctgaccaacc
     7381 gcattttagg cgaagagcgt gtggtagttt atgatatgcc aggaacaacc cgtgattcta
     7441 tttatattcc aatggagcgt gacggtcagc aatataccat cattgatacc gccggtgtgc
     7501 gtaaacgtgg caaagtgaat ttagcggttg agaaattctc ggtaattaaa accttgcaag
     7561 ccattcaaga tgcaaacgtg gtgctattaa ctattgaggc ccgagaaggt atttccgatc
     7621 aggatttatc actactcggc tttattctaa atgctggtcg ttcattggtg attgtggtaa
     7681 acaaatggga cggcttgtcg caagatatta aagatcaagt gaaatcagag ttagatcgcc
     7741 gtttagattt tattgatttt gccagagtgc attttatctc ggcattgcac ggctcaggcg
     7801 tggggaattt gtttgattca gtaaaagaag cctacgcttg tgcaacgcaa aaaacctcga
     7861 cctcaatgct gactcgcatt ttgcgtatgg ctgctgatga acaccaacca ccattggtta
     7921 atggtcgccg agtgaaatta aaatatgctc acccgggtgg ctacaaccca ccaattattg
     7981 tgattcacgg caatcaggtt gaaaaattag cggattctta caaacgttat ttaagtaatt
     8041 atttccgtaa aagtttaaaa attatcggct cgccaattcg gattttattc caagaaggca
     8101 ataatccttt tgccggtaag aaaaacaaac tgacaccaag ccaattacgc aaacgtaaac
     8161 gtttgatgaa gtttattaag aaaagtaaga aataatat
//
LOCUS       DANLXD010000104         7908 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.104, whole genome shotgun sequence.
ACCESSION   DANLXD010000104 DANLXD010000000
VERSION     DANLXD010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7908)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7908)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7908
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.104"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            10..300
                     /locus_tag="PXD18_002108"
     CDS             10..300
                     /locus_tag="PXD18_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302497.1"
                     /translation="MEQLQAVSNEQVFAKLCEVERLLKTKGVNEHSRELWDLGDVAAY
                     FGYTKEHTSRSVVSSPHFPKPIALDGLRGKGRGAKKWVSGEVVKFCLMWKVK"
     gene            complement(570..752)
                     /locus_tag="PXD18_002109"
     CDS             complement(570..752)
                     /locus_tag="PXD18_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix protein, CopG family"
                     /protein_id="HDL6302498.1"
                     /translation="MAMSRNEIQAKSEAKRGIKQKSFKLPLEVIAEIEVLSQKLNIPQ
                     NQLIIQAIQQFKQNNP"
     gene            complement(1030..2028)
                     /locus_tag="PXD18_002110"
     CDS             complement(1030..2028)
                     /locus_tag="PXD18_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDL6302499.1"
                     /translation="MATIIKNGNKYRAQVRKKGIYKTATFSTKTEANRWAYALEAQID
                     AGEYNTTPNILFAELIDKYLKEVTPTKRGKREERYRLLRIAGSNLGNIPLPALTKEHL
                     RQWQNQRLQEVQPVSVSRERATLSALFTKAMEWDYLKENPLKTLEKIKTPPARTRRYS
                     DEEIDKLIFVSGYSPNQPPLLMQQRAGAALLFAIETAMRAGEIAGLKWEHINLQARTA
                     FLPQTKNGYSRTVPLSTKAIAILNQLAQLEPNKQNSVFQLTSRSLDSNFRKLKQKANL
                     HNADLHFHDTRREALTRLSKYLTVMELAKVSGHRDLSILQNTYYNPDISELVSKLQ"
     gene            complement(2256..2332)
                     /locus_tag="PXD18_002111"
     tRNA            complement(2256..2332)
                     /locus_tag="PXD18_002111"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2296..2298),aa:Val,seq:gac)
     gene            complement(2396..3196)
                     /gene="apaH"
                     /locus_tag="PXD18_002112"
     CDS             complement(2396..3196)
                     /gene="apaH"
                     /locus_tag="PXD18_002112"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     ApaH"
                     /protein_id="HDL6302500.1"
                     /translation="MATYIVGDLHGCFNEFQLLLEKVNYNPKQDELFLTGDLVARGED
                     SLACLRFVKDSANNAKTVLGNHDLHLLGIKRVKPNDKIDAIFEAKDRLDLQNWLRNQP
                     LVIHHPKHQFLLTHAGISPEWDLATTLACAKEAEKVLQSDNYADYIAQMYENKPERWS
                     EDLQGVERWRYIINVFTRMRFCYTDKRLDFDCKLPLEQAPQELLAWFDLDNPLFTQKN
                     IIFGHWASLMGKCTRPNIYALDTGCAWGSHLTMLRWEDKQIFTQKRLK"
     gene            complement(3288..5264)
                     /locus_tag="PXD18_002113"
     CDS             complement(3288..5264)
                     /locus_tag="PXD18_002113"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exoribonuclease II"
                     /protein_id="HDL6302501.1"
                     /translation="MFQNNPLLAQLKQQIEASKEYVAGVVKASDKAFGFLECDKKSYF
                     IPPAEMKKVMHGDSVKAVVKRDGDKEQVEIDSLLEPMLDRFIAQVRLNKEGKLQLAVD
                     HPSIKQTIPANTHKKATEKLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKESDNFAP
                     WWVTLARHEQPREPVANEKNYELHDELAREDLSHLYFTTIDSPSTQDMDDALFIEPIK
                     QNGKRTGWRLVVAIADPTAYIPENSHIEKAARQRCFTNYLPGFNIPMLPRELSDDLCS
                     LVPNEKRPALVGFIETDLNGNLIKETTFTSAWVESKDRLAYDDVSDYLEGVENAWQPQ
                     SEETKQQIEWLHQFTQARIQWRAENALLFKEQGDYTFELNEDGSVKDIHVEYRRIANQ
                     MIEESMILANICCAKFLSQHAKTGVFNTHSGFDPKNYELVKSFLLQTLASDENRDELA
                     ERYSAERLATLEGYCQMQRDIQDYPEKFLELRLRRYLTFAEFKAEVAPHFGLGITDYA
                     TWTSPIRKYGDMVNHRLIKQVLLGKQSQAVEESVLSRLQEARRQNRLVERDIADWLYA
                     RYLAPMVEQAVEFECEIADVSRGGLRAKVIKNGAQIFVPFSSLHDNKEEMEYRQEELA
                     LYIKGEKAYQIGQAVKVKLTEVRLETRSIVGNII"
     gene            5424..5702
                     /locus_tag="PXD18_002114"
     CDS             5424..5702
                     /locus_tag="PXD18_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000738492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bor family protein"
                     /protein_id="HDL6302502.1"
                     /translation="MKKLLAIATVFSLAACSTQTLELSPAKEAQYDRVQHFFVSGLAQ
                     KQEIDAAKICNGADKVGKVETETTFFNGLLGTITYGIYSPRQIRVYCN"
     gene            5727..6023
                     /locus_tag="PXD18_002115"
     CDS             5727..6023
                     /locus_tag="PXD18_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bor family protein"
                     /protein_id="HDL6302503.1"
                     /translation="MKKLLAMSVLTALLTTACTTQTAHIGGKVTDNIKPTKSVTQSFF
                     IGGIGQEETLNVVEVCGSKDKVQQVETVLSGGDILLGLVTIGIYTPRTANVYCK"
     gene            complement(6076..6867)
                     /locus_tag="PXD18_002116"
     CDS             complement(6076..6867)
                     /locus_tag="PXD18_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL6302504.1"
                     /translation="MGILTGKRILVTGLASNRSIAYGIANAMKQQGAELAFTYLNDKL
                     KPRVEEFAKEFGSDIVLPLDVATDESITECFTELSKHWEKFDGFVHAIAFAPGDQLDG
                     DYVNAATREGYRIAHDISAYSFVAMAQAARPFLNENAALLTLSYLGAERAIPNYNVMC
                     LAKASLEAATRVMAADLGKEGIRVNAISAGPIRTLAASGIKNFKKMLSAFEKTAALRR
                     TVTIDDVGNSAAFLCSDLASGVTGEVLHVDAGFSVMAMGELGDEE"
     gene            complement(7011..7784)
                     /locus_tag="PXD18_002117"
     CDS             complement(7011..7784)
                     /locus_tag="PXD18_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FNR family transcription factor"
                     /protein_id="HDL6302505.1"
                     /translation="MKIVSEPKTSGRHTCTIHCQNCSISQLCLPFTLNETELTQLDNI
                     IERKKPIQKSQVIFKLGDELRSLYAIRSGTLKAYTLSESGEEQITGFHLPGDLIGFDA
                     ITNMQHEGYAQALETSMICEIPFDILDDLAGKMPKIRHQIMRLMSNEIKSDQEMILLL
                     SKMNAEEKLAAFLYNLSQRYSARGFSAKEFRLTMTRGDIGNYLGLTIETISRLLGRFQ
                     KSGMISVQGKYIIINRMEELAELAGAIKPQQNIIAQTTA"
BASE COUNT         2216 a         1476 c         1695 g         2521 t
ORIGIN      
        1 gtggtaaaaa tggaacaatt acaagcggtc agtaatgagc aagtttttgc aaaactttgt
       61 gaggttgagc ggttattaaa aaccaaaggg gtgaatgagc atagccgtga attgtgggat
      121 ttgggcgatg tagcagcata tttcggctac actaaagaac acaccagccg aagtgttgta
      181 tctagtccac attttccgaa accgattgcc cttgacggct tacgaggcaa gggcaggggg
      241 gcgaagaagt gggtatccgg tgaagtggtg aaattttgtt tgatgtggaa ggtgaagtga
      301 tgataaaaaa gataatttta gatgcttgtt gcggtagccg aatgtttcac tttaataagc
      361 acaacccctc ggtattgttt gctgacaatc gggaatccct gtatcgaaaa ttttaaatgt
      421 tatcgaatac caacctatct atgggcataa aagcggtaaa cataacaaaa cgcattggct
      481 ggcatttgta aagatggata ataacgatta tttgtaaagt atttcaaaat acaaaagccg
      541 ataaatttca ttatttatcg gcttttgttt tatgggttgt tttgcttgaa ttgttgaata
      601 gcttgaataa tcagctggtt ttgtggaatg ttgagttttt ggctaagtac ttcgatttct
      661 gcgatcacct caagcggtag tttaaaggat ttttgcttta ttcctcgttt tgcctcgctt
      721 ttagcttgga tttcatttct tgacattgcc ataatttatc cctattataa attttgttga
      781 agagctggga gctttcaccc ccagcgagtt gcttcagatt agtaagctgg ggagctaagg
      841 actaataaga agacaactag gataatgtat ttaaacattg tgctatcctt cttcatttcg
      901 taaggtttaa gccttacgct cactttcaag ctgtctcttg aaagtgaggt tattataatg
      961 tagggtatcc tacattgcaa gtaataaata caaaaaagcc gataaatttt cgtttatcgg
     1021 cttttgtttt tattgcagtt tgctcacaag ttctgaaata tccgggttat agtaggtatt
     1081 ttgcaaaata cttaaatctc gatgccccga tactttggca agctccatta ccgtcagata
     1141 tttagacaaa cgtgtgagtg cctctcgccg tgtgtcgtga aaatgcagat cggcattgtg
     1201 tagattggct ttttgtttca gcttgcgaaa attcgaatca aggctgcgac tggtgagctg
     1261 gaaaacactg ttttgcttgt tcggttcaag ttgtgccaac tgatttaaaa ttgctattgc
     1321 tttggttgag agtggcacgg tgcgtgaata accgtttttg gtttgtggca aaaatgcggt
     1381 gcgtgcctgc aggtttatat gttcccattt taaaccagca atttcacccg ctcgcattgc
     1441 agtctcaatc gcaaataata gtgctgctcc ggctctttgt tgcattaata gcggtggctg
     1501 gttagggctg tagccggaga caaaaatcag tttgtctatc tcctcatcgc tatatcggcg
     1561 agttcttgct ggtggcgttt tgattttttc cagcgttttt agaggatttt ctttgagata
     1621 atcccattcc attgcttttg taaagagtgc cgataaagtg gctctttctc ttgagacgga
     1681 aaccggctgc acttcttgca agcgttggtt ttgccattgg cgtaaatgct ctttggtgag
     1741 tgccggtaat ggtatatttc ccaagttgct gccggcaatt cttagcaggc gatagcgttc
     1801 ttcccttttg ccacgtttgg tcggagtgac ctctttgagg tatttgtcga ttaattcggc
     1861 aaaaagaatg ttcggggtgg tgttatattc tccggcatca atttgagcct ctaaagcgta
     1921 agcccagcgg tttgcctctg ttttggtgct gaaagtggca gttttataaa tgcctttttt
     1981 gcggacttgt gctcggtatt tgttgccgtt cttaataata gtagccattt ttttattcct
     2041 ttgtgtatgt gtgcagttta agtgtgcaaa tgtgtgcaaa ggaatgttaa tagagatcat
     2101 aaacgatcaa taaatatcaa gttttcatat caaaaatgat gtttttattg atgttatgct
     2161 acacttgggg aagtgtttta aatcaataag ctattgattt ataaggggta tttttggggt
     2221 taagcctgaa tggggatatt caggcttaaa aataatggtg cgactagctg gactcgaacc
     2281 agtgaccccc accatgtcaa ggtggtgctc taaccaactg agctatagtc gcattaacgg
     2341 tgtgcattct attggaaaaa ggaacttagt gcaatatgct tttggtcgaa tgcttttatt
     2401 ttagacgctt ttgggtaaaa atttgtttat cttcccaacg gagcatggtt aaatggcttc
     2461 cccaagcaca gccggtatca agtgcataga tgtttggacg agtgcatttg cccattaggc
     2521 ttgcccagtg accaaagata atgtttttct gtgtaaataa cggattatct aagtcaaacc
     2581 aagccagcag ttcttgaggg gcttgttcaa gcggtaattt acagtcaaaa tctaaccgct
     2641 tgtcggtgta gcaaaaccgc atacgggtaa acacattgat gatataacgc caacgttcaa
     2701 caccttgcaa atcttcactc cagcgttcgg gcttattctc atacatttgg gcgatgtagt
     2761 ccgcataatt gtcactttgt agcacctttt ctgcctcttt ggcacaagct agggtagttg
     2821 ctaaatccca ctcagggctg attcctgcgt gagtcagcaa aaattgatgt ttggggtgat
     2881 gaattacaag cggttgattt ctgagccaat tttgcaaatc gagccgatct ttagcctcaa
     2941 aaatagcatc aatcttatca tttggtttta cccgtttgat gccaagcaag tgcaaatcgt
     3001 ggttgcctag cacggttttg gcattgtttg cagagtcttt cacaaaacgt aaacaggcta
     3061 aagagtcctc accacgggcg actaaatccc ctgttaaaaa gagttcgtct tgcttggggt
     3121 tataattgac tttttctaat aaaagctgaa attcgttaaa gcaaccgtgt aggtcgccta
     3181 caatataagt tgccattgtt tctcctttgt tcccctaaag ttataaacaa gcggttatat
     3241 tttagagaaa atttgcaaaa tctcatcaaa atataaccgc ttgaaattta aatgatattt
     3301 cctacgattg agcgggtttc taagcgtact tcggtgagtt tcactttcac cgcttgcccg
     3361 atctgatagg ctttttcacc tttaatataa agtgcaagtt cttcttggcg gtattccatt
     3421 tcctctttgt tgtcgtgcaa gctggagaat ggcacaaaaa tttgagcacc gttttttatg
     3481 actttcgcac gcaagccacc acgggaaaca tctgcaattt cgcactcaaa ttcgaccgct
     3541 tgttccacca ttggggcaag gtaacgagca taaagccagt cagcaatatc acgttctact
     3601 aaacggtttt gacggcgagc ttcttgtaaa cggcttaaaa ctgattcttc caccgcttgg
     3661 ctttgtttgc caagtaacac ttgcttgatt aaacggtggt ttaccatatc gccatattta
     3721 cggatgggtg atgtccaagt ggcgtaatcg gtaatgccta gtccgaaatg cggggcaact
     3781 tcggctttaa attcagcgaa ggttaaataa cgtcgtaaac gcaactctaa gaatttctct
     3841 gggtagtctt gaatatcacg ttgcatttgg caatagcctt ctaaggttgc taaacgctcg
     3901 gcggagtagc gttcggcaag ctcatcacga ttttcatcgc tggctaaagt ttggagtaaa
     3961 aatgatttta ccaattcata atttttcgga tcaaaacctg aatgggtatt aaatacaccg
     4021 gttttggcat gttggcttaa gaattttgca caacaaatat tggcaagaat cattgattct
     4081 tcgatcattt gattcgcaat acggcgatat tcaacgtgaa tatcttttac cgagccatct
     4141 tcatttaact caaaggtata atcgccttgt tctttgaata gcaacgcatt ctcggcacgc
     4201 cattgaatgc gggcttgagt aaattgatgt agccactcaa tttgttgttt tgtttcttca
     4261 gactgaggtt gccacgcatt ttccacgcct tcgagataat cggaaacatc gtcgtaagcc
     4321 aagcgatctt ttgattcgac ccaagcagag gtaaaggttg tctctttaat gagattgccg
     4381 tttaaatcgg tttcaataaa gccaacgagg gcagggcgtt tttcattcgg gacaagcgaa
     4441 cagagatcgt ctgagagttc tcgaggtaac attggaatgt taaagcccgg caaatagttg
     4501 gtgaaacaac gctggcgagc ggctttttca atatgggaat tttctgggat ataagcggtt
     4561 gggtcagcaa tcgctaccac taaacgccag ccggttcgct tgccattttg cttaattggt
     4621 tcgatgaaca gagcatcgtc catatcttgc gtgcttgggc tgtcaatagt ggtaaagtaa
     4681 agatgagata aatcttcacg agctaattca tcgtgtaatt catagttttt ttcatttgcg
     4741 accggttcac gaggctgttc gtggcgggca agtgtgaccc accaaggggc aaaattatca
     4801 gattctttac agataaattg ggtaacttga gcaaagaaaa aacggtcgtc acgcaatggg
     4861 tgcgttttta attgtgcaac cacccagtcg ccattttcta atttttcagt ggctttttta
     4921 tgggtatttg ccgggatagt ttgcttaatg cttgggtgat caaccgcaag ttgcaatttg
     4981 ccctctttat tcaagcgaac ttgggcaata aatctatcca gcattggctc aagtagtgaa
     5041 tcaatttcta cctgttcttt gtcgccatca cgtttgacta cggctttcac tgaatcaccg
     5101 tgcattactt ttttcatttc cgcaggtgga ataaaatagc tttttttatc gcattctaaa
     5161 aaaccgaatg ctttgtctga ggctttgaca acgcctgcga catattcttt gcttgcttca
     5221 atttgttgtt tgagttgggc taaaagggga ttgttttgaa acataatttc tcattttaaa
     5281 aataaaaaaa ggtgctatcg ttgcaccgaa aaaaacaatg gcattataac ggatttgaac
     5341 caagttcagc aaataaatgc tgttgctata acttataaag gttggtagaa tataatccat
     5401 ttaaaaataa tggagacttt tcaatgaaaa aattacttgc aattgcaaca gtattttctt
     5461 tagcagcctg ttctactcaa acacttgaac tatctcctgc taaggaagct caatatgatc
     5521 gtgttcaaca cttctttgtt tcagggcttg ctcaaaaaca agagatagat gcagcaaaaa
     5581 tttgtaatgg tgcagataag gtaggtaagg tagaaactga aactactttc tttaatggct
     5641 tgttaggtac aattacttat ggtatctatt cacctcgcca aatccgtgta tattgtaact
     5701 aatcctagta atttaaggag ttgaaaatga aaaaattgct tgctatgtct gtattaacag
     5761 ccctgctgac tacagcatgt acaacacaaa ctgcccatat tggcggcaaa gttactgata
     5821 atattaaacc aactaagagt gtaactcagt cgttctttat aggtgggatt gggcaagaag
     5881 aaacattgaa tgttgtagag gtttgtggtt ccaaagataa agtgcagcag gttgaaacag
     5941 tactttcagg tggggacatt ctattaggtc ttgtgactat cggtatttat acacctcgta
     6001 ctgcaaatgt atattgtaag taatatttta ttaaaaaaat aacggactca attgagtccg
     6061 ttatttttat aggaattact cttcgtcgcc taattcaccc attgccatta cgctgaagcc
     6121 ggcatcaacg tgtaacactt cacctgttac accagaggct aaatctgagc ataagaaagc
     6181 tgcagagtta cctacatcat caatagttac ggtgcggcgt aaagcagcgg ttttctcgaa
     6241 agcagaaagc attttcttga agtttttaat gcctgaagca gctaatgtac ggatcgggcc
     6301 ggctgaaatc gcatttacac gaataccttc tttacctaaa tcggctgcca ttacacgggt
     6361 tgcagcttct aaagaggctt tggctaagca cattacattg tagttgggga ttgcacgctc
     6421 tgcacctaag taacttaagg ttaaaagggc ggcattttca tttaagaagg ggcgagcagc
     6481 ttgagccatt gcaacaaagc tataggcact gatgtcgtgt gcaatacgat aaccttcacg
     6541 ggttgcggca tttacataat cgccgtctaa ttgatcgccc ggtgcaaatg cgatagcgtg
     6601 aacaaaaccg tcaaattttt cccaatgttt gcttaattca gtaaagcact cagtaatgct
     6661 ttcatcggtt gctacatcta acggaaggac aatgtctgag ccaaattctt tggcaaattc
     6721 ttcaactcgt ggttttaatt tatcgtttaa gtaggtgaat gcaagttctg caccttgttg
     6781 cttcattgcg tttgcaatac cgtaagcgat cgaacggttg cttgctaaac ctgtcactaa
     6841 aatacgttta ccagttaaga tacccataaa aattcctctt ttatattgat tggggcaaaa
     6901 ttgtgtcgat tataacggat ataggaaaaa cgggcaaatg gagttagcgg ctcatcggat
     6961 cagaaatccc tttttgaacg aggtttcaaa aagggatttg gtaagataaa ttaagcggta
     7021 gtttgagcaa taatattttg ctgcggtttg attgccccgg ctaattcggc taattcttcc
     7081 atacggttaa taataatata ttttccttgt actgaaatca taccgctttt ttggaaacgc
     7141 cctaataaac ggctgatagt ttcaatggtt aaaccaagat aattgccgat atctccacgg
     7201 gtcatagtta gacggaactc ttttgcagag aaaccacggg ctgagtaacg ttgggaaaga
     7261 ttatacaaaa atgcagctag tttttcttcc gcattcattt ttgagagcaa tagaatcatt
     7321 tcttgatcgc ttttaatttc attactcatc aaacgcataa tttgatggcg aatttttggc
     7381 attttgccgg caagatcatc taaaatatcg aatggaatct cacaaatcat tgaggtttcg
     7441 agtgcttgag catagccttc gtgctgcata ttggtaattg catcaaagcc aattagatcg
     7501 ccaggtaaat ggaaaccggt aatttgctct tcaccacttt cacttaaggt ataggctttt
     7561 aatgttccag aacggatagc ataaagcgaa cgcagttcat cacctaactt aaaaataact
     7621 tgcgattttt gaatcggttt tttacgctca ataatattat ctagttgagt taattccgtt
     7681 tcattaagag taaaaggtaa gcatagttgg ctaatactgc aattttgaca atgaattgtg
     7741 caagtatgac gtccgcttgt tttaggttct gatacaattt tcatccattc aaccttaaat
     7801 tagaaaagta ttcctaaatt tgatttagaa caaagtttac cattaaattt acatgaagca
     7861 aagtatacca aggaaaaata aaaatactta caaagaggta tgaaaaat
//
LOCUS       DANLXD010000105         7797 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.105, whole genome shotgun sequence.
ACCESSION   DANLXD010000105 DANLXD010000000
VERSION     DANLXD010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7797)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7797)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7797
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.105"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            25..1452
                     /gene="hldE"
                     /locus_tag="PXD18_002118"
     CDS             25..1452
                     /gene="hldE"
                     /locus_tag="PXD18_002118"
                     /EC_number="2.7.1.167"
                     /EC_number="2.7.7.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase/D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase HldE"
                     /protein_id="HDL6302506.1"
                     /translation="MMMQYSPKFNNAKVLVLGDVMLDRYWFGATNRISPEAPVPVVKV
                     QDIEERAGGAANVAMNIASLGVPVTLHGLIGDDDAGRALDKLLNSHQIQNHCVVINSH
                     PTITKLRILSRHQQLLRLDFEEGFHNVDSTALLAKLSQEITAYGALILSDYGKGTLES
                     VQQMIQIARNAKVPVLIDPKGTDFERYRGATLLTPNMSEFEAVVGHCKDEDEIVSKGL
                     KLIADYDLSALLVTRSEKGMTLLRPNHEPYHLPTQAKEVYDVTGAGDTVISVLATAIA
                     DGRAYEEACYLANAAAGVVVGKLGTSTVSPVELENAIHQRTATGFGVVSEAELKAIVE
                     EAKKRGEKIVMTNGCFDILHPGHVSYLENARKLGDRLIVAVNTDASVKRLKGEARPIN
                     DLAARMAVLAGLASVDWVVPFDEDTPQRLISEILPDLLVKGGDYKPEEIAGSQEVWAN
                     GGDVRVLNFENGCSTTNVIKKIQAL"
     gene            1466..2020
                     /gene="pyrR"
                     /locus_tag="PXD18_002119"
     CDS             1466..2020
                     /gene="pyrR"
                     /locus_tag="PXD18_002119"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HDL6302507.1"
                     /translation="MAREKIIIDTEQFQRTISRISHQIIEKHGDLQDVVIVGIKRRGA
                     EIAELIQKRIEDLAQTRLPYMALDITFYRDDLDLIYQDPVFMGADNQLNLNGKKVILV
                     DDVLFTGRTIRAALDALLDFGRAARIELVIFVDRGHRELPIRADYVGKNIPTAKNEQI
                     QVQTLSYDGINQVVLVPAANKESA"
     gene            2093..3043
                     /locus_tag="PXD18_002120"
     CDS             2093..3043
                     /locus_tag="PXD18_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDL6302508.1"
                     /translation="MKMKLVKSLFAVAVATMSLTQTAHAFEERVVALVNDTPIMQSQV
                     QRVLGKKKATETAQRAAIDQVIDDMLVQQAMKEAGVKVSPAAVNQAVENVAIQNGITY
                     GQLLDALDYQGITLEQFKRNIAQQMAMEQVRHISISKSIQVAPQQVQALAKELMAKDK
                     AAGKLKTVSGKEHRISHILLKTNPILNDAQAKAKLSSLTTDINSGKISFEEAAKTHSV
                     DYASGADGGDLGFNFLEIYDPAFANVASKIKPNQISAPFKSQFGWHILKVTDTRNGDR
                     TEDAYHQRAYQQLVNKQAEEASKDWVKALRKTANIQYVGQ"
     gene            3105..3971
                     /gene="rsmA"
                     /locus_tag="PXD18_002121"
     CDS             3105..3971
                     /gene="rsmA"
                     /locus_tag="PXD18_002121"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HDL6302509.1"
                     /translation="MSSTNSKKHLGHTARKRFGQNFLHDMNIIHSIVSAINPKNGQFL
                     LEIGPGLGALTEPVAELVDKLTVVEIDRDLAERLRHHPFLNQKLTIIEQDALRFNFRD
                     YFNQLNLDEDSVRVFGNLPYNISTPLIFHLLTFHDLIQDMHFMLQKEVVKRLCAAPNS
                     KAYGRLTIMAQYYCQVIPVLEVPPTAFKPAPKVDSAVVRLVPYNQLPYPAKDVYWLNR
                     VTTQAFNQRRKTLRNALSTLFSAEQLDALGVDLTARAENLTIADYVRLANWLHDNPPA
                     IDTTEELVDEDC"
     gene            complement(4082..4711)
                     /gene="upp"
                     /locus_tag="PXD18_002122"
     CDS             complement(4082..4711)
                     /gene="upp"
                     /locus_tag="PXD18_002122"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HDL6302510.1"
                     /translation="MKIVEVKHPLVKHKLGLMREAEISTKDFRELANEIGSLLTYEAT
                     KDLEMESVEINGWSGEKIAVERIKGKKVTVVPILRAGLGMMDGVLEHIPSARISVVGI
                     YRDEETLKPVPYFSKLANDVDERLAIITDPMLATGGSMVATIDLLKKAGCKQIKVLVL
                     VAAPEGIKVLEAAHPDVELYTASIDSHLNENGYIIPGLGDAGDKIFGTK"
     gene            complement(4736..6421)
                     /gene="fadD"
                     /locus_tag="PXD18_002123"
     CDS             complement(4736..6421)
                     /gene="fadD"
                     /locus_tag="PXD18_002123"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase FadD"
                     /protein_id="HDL6302511.1"
                     /translation="MEKIWLNNYPPYSPKTIETDQYESLVEMFEAAIQRHPDIPAYIN
                     MGQVLTFRKLEERSRSFAAYLQNELRLKKGDRIALMMPNLLQYPIALFGALRAGLVVV
                     NVNPLYTPRELEHQLNDSGAKAIVIVSNFAATLEKIVFNTEIKHVILTRMGDQLSFGK
                     RTLVNFVVKYIKKLVPKYKLPHAVSFREALSIGKQRQYVKPNIVSQDLAFLQYTGGTT
                     GVAKGAMLTHQNLIANMMQAKWIVEPLLGNSANMIGLVPLPLYHVLALSMNCLLFIEL
                     GLTGLLITNPRDIPGFIKELKKYKVSVITGVNTLFNALLNHESFKEVDFSHLKLSVGG
                     GAAIQSSVAKRWHDLTGVHIIEGYGMTECSPLISATRGDSVEYSGSIGVPVPNTDIRI
                     VDDEGKEVPLGERGELVVKGPQVMQGYWNRPDETAQVLQDGWMATGDIVVMGDDLNLR
                     IVDRKKDMIIVSGFNVYPTEIEEVISQNPKVNEVVAIGVPSEASGESIKIFVTKKDES
                     LTRDELRTYCRQFLTGYKIPRDIEFRDELPKSNVGKILRRVLRDEELAKVNKA"
     gene            complement(6399..6863)
                     /locus_tag="PXD18_002124"
     CDS             complement(6399..6863)
                     /locus_tag="PXD18_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SoxR reducing system RseC family protein"
                     /protein_id="HDL6302512.1"
                     /translation="MMIEQATVVEYQNGVAIVQCYAKSSCGGCVAQSACGSKALSALA
                     GEKIDPRFRIEVDEPLKVGDKVELGLAENILLKSVFLIYGIPLLVLVMTAVGFSQFFA
                     NELIVLFIMLLSTGITFWAVRKLIHKHSKQANFSPIFLGKVLGDYNGKNMAK"
     gene            complement(6860..>7797)
                     /locus_tag="PXD18_002125"
     CDS             complement(6860..>7797)
                     /locus_tag="PXD18_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MucB/RseB C-terminal domain-containing protein"
                     /protein_id="HDL6302513.1"
                     /translation="ACYTFAWAESTIKTPLAYLTAMSEAHKKSTYELVYILQQGSDTE
                     SFRLRHAFTHNKEYAQLLNLDHSREEIILKNNKVSYLGYNFRPFSLNSSQILDNLPNV
                     LYTDYANLKGYAFLDAGKDRISDRITKVIRMKPNDTLRYAYILWIDEETHLLLKSQVL
                     NMDNLVLEEFRVLQLYQSPELDRIANVIESLMLPTLTTVKKEEFPKSDGWQVKWLPTG
                     FRLIQQQTVTGATYQVESEYVDSRVYSDGLSTLTIYIMPSQGVSFNEYAWQQGKLTIL
                     NQTINDRDIVIIGDVPLQSAKQIMNNIGFKEGAQP"
BASE COUNT         2300 a         1685 c         1540 g         2272 t
ORIGIN      
        1 atcatttaac agagaatatt aactatgatg atgcaatact ctccaaaatt taataatgct
       61 aaagtgctgg tgcttggcga tgtaatgtta gaccgttact ggttcggggc aaccaatcga
      121 atttcgcctg aagcccctgt gccggtggtg aaagtacaag atattgaaga gcgtgccggc
      181 ggtgcggcaa acgtggcgat gaacatcgcc agccttggcg taccggtaac attacacggc
      241 ttaattggcg atgatgatgc cgggcgtgct ttagataaat tacttaattc ccaccagatc
      301 caaaatcatt gtgtggtgat taattcgcac ccaaccatca caaaattgcg gattctttcc
      361 cgccatcagc aattattgcg gttggatttt gaagagggtt ttcacaatgt agattctacc
      421 gccctacttg caaaactttc gcaagaaatt accgcttacg gagcattaat tctctcggat
      481 tacggcaaag gcacattgga atcggtgcaa caaatgatcc aaattgcccg caatgctaag
      541 gtgccggtgc tgatcgaccc gaaaggcaca gactttgaac gctatcgtgg ggcaacattg
      601 cttacaccaa atatgtcgga atttgaagcg gtggttgggc attgtaaaga tgaggatgag
      661 attgtcagca aagggttaaa actgattgcc gactatgatt tatctgcact attagttacc
      721 cgttcggaaa aaggaatgac cttacttcgc ccgaaccacg agccttatca tctgccgacc
      781 caagccaaag aggtttatga tgtaaccggt gcaggcgata ccgtaatcag tgtattagcc
      841 actgcgattg ccgatggcag agcctatgaa gaagcctgct atttagccaa tgctgccgcc
      901 ggtgtagtcg taggtaaatt agggacttca accgtcagcc cggttgagct ggaaaatgcg
      961 attcaccaac gcactgccac cggttttggc gtggtttctg aagccgaatt aaaagcgatt
     1021 gtggaagaag cgaaaaaacg tggcgaaaaa atcgtgatga cgaacggttg ctttgatatt
     1081 cttcaccccg gtcacgtttc ctatttggaa aacgcccgta aattaggcga ccgattaatt
     1141 gtagccgtca ataccgatgc ttcggtaaaa cgcctaaaag gcgaagctcg cccgattaat
     1201 gatttagctg cccgtatggc agttttagct ggtttagcct ctgtagattg ggttgtgcct
     1261 tttgatgaag atacaccaca acgtttaatc agtgaaatcc tacctgattt attggtaaaa
     1321 ggtggtgatt acaagccgga agagattgcc ggcagccaag aagtatgggc aaacggcggc
     1381 gatgtgcgag tattgaactt tgaaaacggc tgttctacca ctaatgtgat caagaaaatt
     1441 caagcactat aatggtaata agcgaatggc gagagaaaaa atcattattg ataccgagca
     1501 atttcagcgc acaatatctc gtatttcaca tcaaattatt gaaaaacacg gtgatttgca
     1561 agatgtagtg attgtcggca tcaaacgtcg aggagctgaa attgccgagt taatccaaaa
     1621 acgcattgaa gatttagctc aaacacgctt gccttatatg gcgttagata ttacgttcta
     1681 ccgtgatgac ctagacttaa tttatcaaga tcccgtattt atgggagccg ataatcagct
     1741 aaatctgaac ggtaaaaaag tgattttggt tgatgatgtt ctgtttaccg gcagaaccat
     1801 tcgggcggca cttgatgcac tcttagattt tggcagagct gccagaattg aactggtgat
     1861 ttttgtcgat agaggtcatc gggaattgcc tatccgagcc gattatgtcg gaaaaaatat
     1921 tccaacggct aaaaacgagc aaattcaggt gcaaacgctc tcgtatgatg ggattaacca
     1981 agtggtctta gttcctgctg ccaataaaga aagtgcttaa attaagtgaa ccttttcgct
     2041 aaacttatct ctaaggaaaa gttactgctt aattacctcc attaggattg ttataaaaat
     2101 gaaattagtc aaatcattat ttgctgttgc cgttgcaaca atgagtctta cccaaaccgc
     2161 ccacgcattt gaagaaagag tggtggcgtt agtgaatgat acccctatta tgcaaagcca
     2221 ggttcaacgt gtgcttggca agaaaaaggc gacagaaact gctcaacgtg cggctattga
     2281 tcaagtgatt gatgatatgt tggtgcaaca ggcaatgaaa gaagccggcg ttaaagtcag
     2341 cccagctgcg gtaaaccaag cggttgaaaa tgtagcaatt caaaacggca ttacttacgg
     2401 tcagttatta gatgcgttag attatcaagg tattacactt gaacaattca aacgtaatat
     2461 tgctcaacaa atggcaatgg aacaagttcg ccatatcagc attagcaaat cgattcaggt
     2521 tgcaccacag caagtgcaag ctctggcgaa agagttaatg gcgaaagata aagcagcagg
     2581 caaattgaaa accgtttctg gcaaagagca tcgcattagt catattttgc tcaaaaccaa
     2641 cccgatttta aatgatgctc aagccaaagc aaaacttagc agcttaacta ctgatattaa
     2701 ctcaggcaaa atcagctttg aagaagcggc aaaaacccat tctgttgatt atgcctcagg
     2761 ggcagacggt ggagatttag gttttaactt cttagaaatt tacgatccgg catttgcgaa
     2821 tgttgcatca aaaatcaaac caaaccaaat ttctgctccg tttaaatcgc aatttggttg
     2881 gcatatttta aaagtcaccg acactcgtaa cggagacaga accgaagatg cttaccacca
     2941 acgtgcttat cagcaactgg tgaacaagca agccgaagaa gcctctaaag attgggtaaa
     3001 agcgcttaga aaaaccgcca atattcaata tgtcggtcaa taattaaaat ttttaagaac
     3061 ctcgcataat gcggggttct tttcttattt caaaaaggat aacaatgagt tctacaaatt
     3121 ccaaaaaaca tttaggtcat accgctcgta agcgtttcgg gcaaaacttt ttgcacgata
     3181 tgaacattat tcacagcata gtttcagcca ttaacccgaa aaacggacaa tttttattag
     3241 aaatcggtcc gggtttagga gcattaaccg agccggttgc cgaattggta gataaactca
     3301 cggtggttga aattgaccgt gatttagcag agcgtttacg ccaccacccg tttttaaacc
     3361 aaaaactcac cattattgag caagatgccc tacgctttaa tttccgtgac tattttaacc
     3421 aactcaactt agacgaagac tcggtgcgtg tgtttggtaa cttaccttac aacatttcta
     3481 cgcccttgat attccacctg ctgacctttc acgacttaat tcaagatatg cactttatgt
     3541 tgcaaaaaga ggtggtgaaa cgtttatgtg ccgcgccaaa cagtaaagca tacgggcgtt
     3601 taaccattat ggctcaatac tattgccaag taattccggt gctggaagtg ccgccaaccg
     3661 cctttaaacc ggcaccaaaa gtcgattctg cggtagtgcg tttagtgcct tataaccaac
     3721 tgccttatcc ggcaaaagat gtgtattggc tcaatcgggt cacgactcaa gcctttaacc
     3781 aacgccgtaa aaccttacgc aatgctcttt caaccctgtt tagtgcggag caactggacg
     3841 ccttaggcgt tgatttaacc gcccgagcgg aaaaccttac cattgccgat tatgtgcgtt
     3901 tggctaactg gctacacgac aacccgccgg caattgatac aaccgaagaa ttggttgatg
     3961 aagattgcta atcaataaat tacaagcggt catttttcta ccaagatttg caaatcttta
     4021 gtgaaaaatg gccgcttgtt taaatcagct ttacttgttt tgctgttact tagttttgat
     4081 gttacttggt gccgaaaatt ttatcccctg catcgcctaa gcctggaatg atatagccgt
     4141 tttcgtttaa gtgactatcg attgaggcgg tgtagagttc aacatctggg tgggcggctt
     4201 ctaatacttt aatcccctct ggagcggcaa ctaacactag cactttaatc tgcttacagc
     4261 ctgctttttt caggaggtca atggttgcta ccattgagcc accggttgca agcattgggt
     4321 cggtgataat ggctaaacgc tcatcaacat cgttggctag tttggagaaa tacggcacgg
     4381 gctttaaggt ttcttcgtca cgataaatcc caaccacact aattctggca cttggaatat
     4441 gctctaacac accgtccatc atacctaagc cagcacgcag aatcggcaca acagtcactt
     4501 ttttgccttt aattcgctca accgcaattt tctctccgct ccagccattg atctccacac
     4561 tttccatttc cagatctttg gttgcttcgt aagtaagcag actaccaatt tcattcgcta
     4621 gctcacggaa atctttggtg ctgatttccg cttcacgcat taagcccaat ttatgcttta
     4681 caagtgggtg ttttacttca acaattttca ttttaagctc cttaattagt gtaatttaag
     4741 ccttattcac ctttgctaat tcttcgtctc ttaacactcg gcgaagaatt ttgccgacat
     4801 tactttttgg taattcgtca cggaattcga tgtctcttgg aattttgtag ccggttaaga
     4861 attgacgaca ataggttctc aattcatctc gagttaaact ttcatctttt ttggttacaa
     4921 aaattttaat gctttcgccg gaagcctcac tcggcacacc aatcgccact acttcattca
     4981 cttttgggtt ttgggaaatc acttcttcaa tttcggttgg gtacacatta aaaccggaga
     5041 caataatcat atctttttta cgatcaacaa tgcgtaagtt cagatcatcc cccattacca
     5101 caatgtcacc ggttgccatc caaccatctt gtagcacttg tgccgtttca tcaggacggt
     5161 tccaatagcc ttgcattact tgcggccctt tcaccaccag ctcgccccgt tcgccgagtg
     5221 gtacttcttt gccttcatca tccacaatac gaatgtcagt atttggcact ggcacgccaa
     5281 tagagccgga atattccacc gaatcgccac gggttgcact aatcagcgga gaacattctg
     5341 tcattccata accttcgata atatgtacgc cggttaaatc gtgccagcgt tttgccacgc
     5401 tagattggat cgctgcaccg ccacctacac ttaattttag gtgtgaaaaa tcaacctctt
     5461 taaaactttc gtgattaagt aatgcattaa acaatgtatt taccccagta atcactgaaa
     5521 ctttgtactt ttttaattct ttaataaagc ctggaatatc gcgcggatta gtaattaata
     5581 atccggtaag tcctaattcg ataaagagca agcaattcat cgaaagtgct aagacgtgat
     5641 acagcggtaa aggtaccaat ccaatcatat tggcagaatt acccaacaat ggctcaacaa
     5701 tccattttgc ctgcatcata ttagcaatta agttttgatg agtcagcatt gcccctttcg
     5761 ctacacctgt agtaccgcca gtgtattgta aaaaggcgag atcttggctg acaatattcg
     5821 gttttacata ttgacgctgt ttgccaatgc ttaaggcttc acggaagctg accgcatgtg
     5881 gcaatttata tttcggcact aattttttga tgtatttcac cacaaaattg actaaggtgc
     5941 gtttgccgaa tgaaagttgg tcgcccattc gggtcaaaat aacgtgctta atctcagtat
     6001 taaagacaat tttttctaag gtagccgcga agttcgagac tatcacaatc gctttcgcac
     6061 cactgtcatt taattgatgt tctaattcac gcggcgtata aagcgggttg acattcacca
     6121 ccacaagccc ggcacgtaat gcgccaaata aagcgatcgg atattgcaat aaattcggca
     6181 tcatcaatgc gattcgatca ccttttttca ggcgtaattc attttgcaaa taagcggcaa
     6241 acgagcggct acgttcttcc aatttacgga acgttaaaac ctgccccata ttaatataag
     6301 ctggaatatc agggtggcgt tgtatcgctg cttcaaacat ttccactaaa gattcatatt
     6361 gatctgtttc aatcgttttt ggtgaataag gcggataatt atttagccat attttttcca
     6421 ttatagtctc ctaaaacctt acctaaaaag ataggtgaaa aatttgcttg tttgctgtgt
     6481 ttatgaatca attttcttac agcccagaat gttatacctg ttgaaagcaa cattataaat
     6541 aaaacaataa gctcatttgc aaaaaattgc gaaaatccga ccgctgtcat cacaagaacc
     6601 agcagaggaa tgccataaat taaaaacacg cttttgagca agatattttc agctaaccct
     6661 agttcaacct tatcgcctac ttttaggggt tcatctacct caatacgaaa acgagggtca
     6721 attttttcac ctgctaatgc tgataatgct ttgctgccac aagcagactg agctacacag
     6781 ccaccacagc tacttttagc ataacattgt acaatagcca caccattctg atattccacc
     6841 accgtagcct gttcgatcat catggctgag ctccttcctt aaaaccaata ttgttcataa
     6901 tttgcttagc cgattgcaac ggcacatcac caataatcac aatatctcta tcattaatcg
     6961 tttgatttaa aatcgttaat ttaccttgtt gccaagcgta ctcattaaaa ctcacgcctt
     7021 ggctaggcat aatataaata gttaatgtag ataaaccatc actatatact ctgctatcta
     7081 catactcact ttccacttga tatgtcgcac ctgtgactgt ttgttgctga attaacctaa
     7141 accctgtcgg caaccacttc acctgccaac catcagactt aggaaattct tcttttttca
     7201 ctgtcgttaa tgttggtaac attagtgatt ctattacatt tgcaatccta tccaattctg
     7261 gagattgata aagttgcaaa actctgaatt cttctaatac caaattatcc atattcaaga
     7321 cttggctttt aagtaataaa tgtgtttctt catcaatcca tagtatatag gcatatctta
     7381 aagtatcatt tggcttcata cgaattacct ttgtaattcg gtcagaaata cgatctttac
     7441 cagcatctaa aaaggcataa ccttttaaat ttgcataatc tgtgtaaagt acattaggga
     7501 ggttatctaa aatctgtgaa ctatttaaac taaaaggacg aaaattatac cccaaatagc
     7561 tgaccttgtt attttttaaa ataatttctt ctcggctgtg atctaaattc agtaattggg
     7621 catattcttt attatgggta aaagcatgac gtaaacggaa agattctgta tcacttccct
     7681 gttgaagaat ataaactaat tcataagtgg attttttatg tgcttctgac atagccgtta
     7741 aatatgctaa tggtgtttta atagttgatt ctgcccaagc aaatgtatag caggcag
//
LOCUS       DANLXD010000106         7745 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.106, whole genome shotgun sequence.
ACCESSION   DANLXD010000106 DANLXD010000000
VERSION     DANLXD010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7745)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7745)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7745
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.106"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(19..1302)
                     /locus_tag="PXD18_002126"
     CDS             complement(19..1302)
                     /locus_tag="PXD18_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6302514.1"
                     /translation="MTACHEPKRSIWQQIFTKNMLLCVYTGFCSGLPLFVLIQLMPAW
                     LTSANLDIKTIAAFTLTSLPYTWKFLWAALLDRYFPPFLGRRKSWIFISQIGLLVILA
                     SFGLFNPVQDISIIVTLSVLLAFLSATQDIVVDAFRREILSDNELGLGNSIHVNAYRI
                     AGLIPGGLSLFLADHYAWDTVFLITAAFLVPCLFVTLIIAAEPNHKPIDRSKPFYMAF
                     VDPFKEFFTRKGVAGAIGLILFIFLYKLGDSLATTLQTKFILDMGFTKSHIAGIVKIT
                     SLWCSIGGGIIGGVAMLKLGVNRALWLFGFVQLITILGFAYLASFEHFPTESIGAAEL
                     WKLGLVMAGEYLGVGLGTAAFVAFMARETNPAYTAMQLAIFTSLAALPSKMLGAYTGH
                     LVEMMGYYQFFWLCFFIGIPGMLMLFKVAPWGQAE"
     gene            1468..5184
                     /gene="metH"
                     /locus_tag="PXD18_002127"
     CDS             1468..5184
                     /gene="metH"
                     /locus_tag="PXD18_002127"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HDL6302515.1"
                     /translation="MNTQHRTELLQNALTERILILDGAMGTMIQKYKLTESDFRGERF
                     KNSTIDLKGNNDLLTLTQPLLISAIHEKYLAAGADIIETNTFSATTIAQADYELESIA
                     YELNLVGAKLARLAADKFSIPEKPRFVAGILGPTNRTCSISPDVNDPGFRNITFMQLV
                     EAYAEATRGLIEGGADLIMIETIFDTLNAKAAVFAIETVFDELGVKLPIMISGTITDA
                     SGRTLSGQTTEAFYNSLRHAKPLTFGLNCALGPKELRPYVEMMSKISETFVSVHPNAG
                     LPNAFGGYDLGAEEMATYIKEWAELGWLNIVGGCCGTTPEHIQAFAEATKGVAPRKLP
                     EIPTAMRLSGLEPLTIDDNSLFVNVGERNNVTGSAKFKKLIKEEKFAEAIEIAISQVE
                     NGAQVIDVNMDEALLDSKKCMTRFLNILATEPEAAKVPIMIDSSKWEVIEAGLQTVQG
                     KPIVNSISLKEGEEKFIHQAKLCRRYGAAVVVMAFDEVGQADTEERKVEICTRAYRIL
                     VDQLGFPPEDIIFDPNIFAIATGIEEHNNYGVDFIQACERIKRDLPHAKISGGVSNVS
                     FSFRGNNVVREAIHAVFLYYAIKAGMDMGIVNAGQLAIYDDLDPELREAIEDAVLNHR
                     HDTTDRLLEISEKYRGVKVESADESAAEWRNLPVAERLKHALVKGITTYIIEDTEEAR
                     QQFASPLEVIEGPLMAGMDVVGDLFGDGKMFLPQVVKSARVMKQSVAYLEPYINATKQ
                     KGSSNGKMVIATVKGDVHDIGKNIVSVVLQCNNFEVIDLGVMVPADVIIETAIREKAD
                     LIGLSGLITPSLDEMEYFLGEMNRLKLDIPVLIGGATTSKEHTAIKLYPKYNYPVVYT
                     ANASRCVTVCATLMNPEAKAEFWEKTKAEYEEIQRKFAVRKPLRNGLSIEEARANRFD
                     GFSGEWADYVPPTPKQTGIIEYKNVPIATLRKFIDWSPFFMLWGLMGGYPDAFDYPEG
                     GEEARRVYNDAQRVLDEFEQNGKLNPSGIMGIFPAVREGDDIAILNEDRTACIGKSYH
                     LRQQSERGKNSKSPYNLCLSDFIADRESGQQDWFGMFAVCAGIEEHYLVESYKAAGDD
                     YNAILLQAVGDRLAEAMAEYLHFELRTKVWGYTVEDEDNGRLIREEYIGIRPAPGYPS
                     CPEHTEKQIIWDLLEVEQRIGMKLTESYAMWPAASVCGWYFTHPTSNYFTLGKIDEDQ
                     VLDYAKRKGWDELTAKKWLSVAMKQDVKSQAENI"
     gene            5292..7295
                     /locus_tag="PXD18_002128"
     CDS             5292..7295
                     /locus_tag="PXD18_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HDL6302516.1"
                     /translation="MIEKQNYHLVQLLKDSNYQLTQFSPAYIKKLEESIFLKSGKNGD
                     IPHIQCLVRKKDIKLTPEEAVRQLYLMNLHYEYDYPFERMELEYSVVFGREKKRADIV
                     IFDRDNPNAVYIMVELKKPKLKDGKEQLKSYCNATGAPIGVWTNGESISYYNRRDPNY
                     FKDIPDIPNAQQKLSDLLQERWTIQDLIDNDKIAKQRKSLKDLVIEMEDEVLANAGVD
                     VFEELFQLIFTKLYDEMESTRNKSRYLEFRNYGDTESELKAKIQSLFDRAKNKWEGVF
                     AESAKINLSPSHLAICVSSLEEVKLFNSNLDVVDEAFEYLINKSSKGEKGQYFTPRYV
                     IDMCVKMLDPKPEETVIDTAAGSCGFPVHSIFHVWEKQLKARGLERSHLFTAEEKLPE
                     QTDYVKEKVFAIDFDEKAVRVARTLNLIAGDGQTNVLHLNTLDYERWEDFTKEEEWND
                     VYGEGWKKLRKLRKTKNENRDFQFDVLMANPPFAGDIKETRILARYELGKNSKGKQQS
                     KVGRDILFIERNLDFLKDGGRMAIVLPQGRFNNSSDKYIRDFIAERCRILAVVGLHGN
                     VFKPHTGTKTSVLFVQKWHDELCPKVEDYPIFFATMQKSSKDNSGDKIYVKNADGTLK
                     LDNHQHLIVEHDLFNHDNSTQDGIAEAFIEFAKKEKLSFVGKD"
     gene            7394..>7745
                     /locus_tag="PXD18_002129"
     CDS             7394..>7745
                     /locus_tag="PXD18_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL6302517.1"
                     /translation="MDSTFFLKKYLNHPSFNFPLSLNEVSLIKSGTTPTDRDDNLKEG
                     VVLLKTNDIRNNLLNKYSSVDYFISEDINEKMISSQLKEGDVLVNIVGATLEVVGRVA
                     YVSSTFPKANITQAM"
BASE COUNT         2403 a         1602 c         1777 g         1963 t
ORIGIN      
        1 tcttattttt atgaatagct attcagcttg tccccaagga gcaaccttaa acaacattag
       61 cattcccgga ataccaataa agaaacagag ccagaagaat tggtaatagc ccatcatttc
      121 cactaaatgc cctgtgtatg cccctaacat tttgcttggt agggcagcaa ggctggtgaa
      181 aatggcgagc tgcattgcag tgtaagcggg attagtttca cgagccataa aggcaacgaa
      241 agccgctgtg cctaaaccca cgcccagata ttcacctgcc atcactaagc ctaatttcca
      301 aagctcggca gctccaatgc tttcggtagg gaaatgctca aaactggcaa ggtaagcgaa
      361 gcctaaaata gtaattaatt gtacaaatcc gaacagccat aaggctcggt taacgcccaa
      421 tttcaacatt gccacgccac caataatacc gccgccaatg ctgcaccaaa gtgaagttat
      481 tttcacaatg ccggcaatgt gcgatttagt aaaacccata tccaaaataa atttggtttg
      541 tagcgtagtt gcaagggaat cgcctaattt atataggaaa ataaatagaa tcagcccaat
      601 cgctcctgcc acgcctttac gggtgaaaaa ctctttgaac ggatcgacaa acgccatata
      661 aaacggctta gaacggtcga ttggcttatg attcggctcg gcagcgatta ttagcgtaac
      721 gaataagcaa ggcactaaaa aagcagcggt aatcagaaat acggtatccc acgcatagtg
      781 atcggctaaa aataatgaaa gcccacccgg aatcagccct gcaatacgat aagcattaac
      841 gtggatagag ttacctaacc cgagttcgtt atccgataaa atttcacgcc gaaaggcatc
      901 caccacaatg tcttgcgtgg cggaaagaaa agctaatagc acagaaagag taacaataat
      961 tgaaatatct tgcactgggt tgaacaagcc aaagctggct aaaatcacca atagcccgat
     1021 ttgtgaaatg aaaatccagc ttttgcgtct gcctaaaaaa ggtggaaagt agcgatctaa
     1081 caatgcagcc cacaggaatt tccacgtgta gggcaaagag gtcagggtga aggcggcaat
     1141 agttttaata tctaaattgg cactggttag ccaagccggc attagctgaa ttaacacaaa
     1201 caacggtaaa ccggaacaaa agccggtgta aacacaaagc aacatatttt tagtaaaaat
     1261 ctgttgccag atagagcgtt tgggttcgtg acaagcggtc atatttttcc tacattttgc
     1321 aaaataaaaa ggggaagaac tgagccaata tagcataatt ttaaaggcga ctctaaccct
     1381 ttccatttcg tcacagataa ggtttgacag ccttgcgaca tatttctatt attcctttta
     1441 atcaaactaa aaaactggaa gcagagtatg aacacgcagc atagaaccga attacttcaa
     1501 aatgccctta ccgaacgcat tcttatctta gacggtgcga tgggaacgat gatccaaaaa
     1561 tataaactaa ccgaatctga tttccgaggt gaacgtttta aaaacagtac catcgatctt
     1621 aaaggcaata acgacctact cacactcacc cagccactcc tgatttctgc tattcacgag
     1681 aaatatttag ccgccggtgc ggatattatc gaaactaata cctttagtgc gacgaccatt
     1741 gctcaagcag attatgaact tgaaagtatt gcttatgagc tgaatcttgt gggggcaaaa
     1801 cttgcccgtc ttgccgccga taaattctcc atccctgaaa aacctcgttt tgttgccggt
     1861 attcttgggc cgactaaccg tacttgttcg atttcccctg atgttaatga ccccggtttc
     1921 cgtaacatta cctttatgca actggtggaa gcctatgccg aggcaacccg tggtttgatt
     1981 gaaggtgggg cggatctgat tatgatcgaa accattttcg ataccctgaa tgccaaagcg
     2041 gcggtgtttg caattgaaac ggtgtttgat gaactgggcg tgaaattgcc gataatgatc
     2101 tccggcacca ttaccgatgc ctcagggcga acgctgtcag ggcagaccac ggaggcgttt
     2161 tataactcgc tccgccacgc caaaccgctg acgttcggct tgaactgtgc gctcgggccg
     2221 aaggaactcc gcccttatgt agagatgatg tcgaaaatca gtgagacttt tgtttcggtt
     2281 cacccgaatg ccggcttgcc aaacgctttt ggcgggtacg atttaggggc ggaagagatg
     2341 gcgacttaca tcaaagagtg ggcagaactc ggctggctga atattgtcgg cggctgttgt
     2401 ggcaccacgc cggagcatat ccaagccttt gccgaagcaa ccaaaggcgt tgcgcctcgt
     2461 aaattacctg aaattccaac cgctatgcgt ttgtcgggct tagaaccgct gacgattgac
     2521 gataattcgc tgtttgtgaa tgtgggcgaa cgcaataacg tcaccggttc ggcaaaattt
     2581 aagaagctga ttaaagaaga aaaatttgcg gaagcgattg aaattgccat cagccaagtg
     2641 gaaaacgggg cgcaggtgat tgacgtgaat atggacgagg cgttgctcga ttccaaaaaa
     2701 tgtatgaccc gtttcctcaa cattcttgct accgaacctg aggcggcaaa agtgccgatt
     2761 atgattgact cctcgaaatg ggaggtgatc gaggcgggct tgcaaacggt gcagggcaag
     2821 ccgatagtga actccatttc actcaaagag ggcgaagaga aatttattca ccaagccaaa
     2881 ctctgccgcc gctatggggc tgcggtggtg gtgatggcat ttgacgaagt cgggcaagcg
     2941 gataccgaag aacgcaaggt agaaatttgt acccgagctt atcggatttt ggttgatcag
     3001 ctcggcttcc caccggaaga cattattttc gacccgaaca tttttgcgat tgccaccggt
     3061 attgaagaac acaataacta cggcgtggat tttatccaag cctgtgagcg gattaaacga
     3121 gacttgccac acgccaaaat ttccggcggg gtgtcgaatg tctctttctc tttccgaggc
     3181 aacaatgtgg tgcgtgaggc tattcacgcc gtgttcctct actatgcgat caaagccgga
     3241 atggatatgg ggatcgtgaa cgcagggcag ttggcgattt atgacgacct cgaccctgaa
     3301 ctgcgagagg cgattgaaga tgcggtgctg aaccaccgtc atgacactac cgaccgcctg
     3361 ttggaaattt ccgaaaaata tcggggcgta aaagtagaaa gtgccgatga aagtgccgcc
     3421 gagtggcgaa atttacctgt ggcagagcgt ttaaaacacg ccctcgtaaa aggcataacg
     3481 acctacatta ttgaagatac cgaagaggct cgccagcaat ttgcctctcc gctggaagtg
     3541 attgaagggc cgctcatggc gggtatggac gtggtgggcg acctgttcgg agacggcaaa
     3601 atgttcctgc cgcaagtggt gaaatcggct cgggtaatga aacagtccgt tgcctattta
     3661 gagccgtaca tcaacgccac caagcagaaa ggatcgagca acggcaaaat ggtgatcgcc
     3721 accgtgaaag gtgatgtaca cgacatcggc aaaaacatcg ttagcgtggt gttgcagtgc
     3781 aataactttg aagtgataga cttaggcgtg atggtgcctg ccgatgtaat tatcgaaact
     3841 gctattcggg agaaagccga tctcattggg ttaagcggac taattacccc atcgctggac
     3901 gaaatggagt attttttagg tgaaatgaac cgcttgaagc tcgatattcc ggtgctgatt
     3961 ggcggcgcaa cgacctcaaa agagcatacg gcgatcaaac tttatccgaa atataactac
     4021 cccgtagtct ataccgccaa cgcttcacgt tgcgtaaccg tctgtgcgac cttgatgaac
     4081 cctgaggcaa aagccgaatt ttgggaaaaa accaaagccg aatacgaaga aattcagcgt
     4141 aaatttgccg ttcgcaaacc acttcgcaac ggtttatcta ttgaggaggc tcgagccaat
     4201 cgttttgacg gatttagtgg cgaatgggca gactatgtgc cgccaacgcc aaaacagacc
     4261 ggcattatcg agtacaaaaa tgtaccgatt gccaccctac gcaaatttat cgactggtcg
     4321 ccgttcttta tgctctgggg cttaatgggc ggttatcctg atgcctttga ttatccggaa
     4381 ggcggcgaag aggcacgccg tgtctataac gatgcccaac gggtgctgga cgaatttgag
     4441 caaaacggca agctcaaccc aagtgggatt atgggcattt tccctgccgt gcgtgagggc
     4501 gatgatattg caattttaaa cgaagatcgc accgcttgta tcggcaaatc ctaccacctc
     4561 cgccaacaat ccgaacgagg caaaaacagc aaaagcccgt acaacctctg tttaagcgat
     4621 tttatcgccg accgagaaag cggacaacaa gactggttcg gaatgttcgc cgtttgtgcc
     4681 ggcattgaag aacactattt agttgaaagc tacaaagcgg caggcgatga ctacaacgcc
     4741 attttgctcc aagccgttgg cgaccgcttg gcagaagcaa tggcggaata cctacacttt
     4801 gagctacgta ccaaagtctg gggctacacc gtggaagacg aagacaacgg acgcttaatc
     4861 cgtgaagaat acatcggcat ccgccctgcg cccggctacc caagctgccc ggaacacacc
     4921 gagaaacaga taatttggga cttgttagag gtggaacaac gcatcggcat gaaactcacc
     4981 gaaagctatg ccatgtggcc ggcagcaagt gtctgcggct ggtacttcac ccaccctacc
     5041 agcaactact tcactctcgg caagattgat gaagatcagg tgttggatta cgccaaacgc
     5101 aaaggctggg acgaactcac ggcgaagaaa tggttaagtg tggcgatgaa acaagatgtc
     5161 aagtcgcagg ctgaaaacat ttaatgtagt ggcgggtttt aacccgcctg ttacaagcgg
     5221 ttggttttga gataaaatat gcaaaattta tctctctttt atgcaaagaa gttatcatcg
     5281 agaacaaaac aatgattgaa aaacaaaatt atcacttagt acaactttta aaagacagta
     5341 attatcaatt aactcaattt tctcctgcgt atataaaaaa attagaggaa tctattttcc
     5401 tcaaatcagg gaaaaatgga gatattcctc atattcaatg tcttgttcgt aaaaaggata
     5461 ttaagctcac acctgaagaa gcagtacgcc aactctattt aatgaatttg cattatgaat
     5521 atgattatcc atttgaacga atggaattag aatattctgt tgtattcggg cgtgagaaga
     5581 aacgagcgga tattgtcatc tttgatagag ataatcctaa cgctgtctat attatggtgg
     5641 agctgaaaaa gccgaaatta aaagatggta aagaacaatt aaaatcttat tgtaatgcga
     5701 ctggagcacc tattggtgta tggacaaatg gcgaaagtat ttcttactat aatcgccgtg
     5761 atcctaatta ttttaaagat attcccgata ttccgaatgc tcaacaaaaa ctttctgatt
     5821 tattacaaga acgttggact attcaagatc tgatagataa tgacaaaatt gccaaacaac
     5881 gtaaatcatt gaaagatctt gttattgaaa tggaagatga ggtactggcg aatgctggag
     5941 ttgatgtttt tgaagagtta tttcaactta tttttactaa actctatgat gaaatggaaa
     6001 gtacacgcaa taaaagtcgt tatttagagt ttcgtaacta tggtgatacc gaaagtgaat
     6061 taaaggcaaa aattcaatct ctatttgatc gtgcaaaaaa taaatgggaa ggcgtatttg
     6121 ctgaaagtgc caaaatcaac ctttcccctt cgcatttggc gatttgtgta tcttcattgg
     6181 aagaagtaaa gctgtttaat tctaaccttg atgtagtgga tgaagcattt gagtacttaa
     6241 ttaataaatc cagtaaagga gagaaaggac aatactttac gcctcgttac gtcattgata
     6301 tgtgcgtaaa aatgctcgat ccaaaacctg aagaaacagt cattgatacc gcagcaggaa
     6361 gctgtggttt tccagttcat tctatttttc acgtttggga aaaacaactt aaagcgagag
     6421 gattagaacg ctcacactta tttactgctg aagaaaaatt gcctgaacaa acagattatg
     6481 tgaaagaaaa agtctttgcg attgatttcg atgaaaaggc agtacgtgtt gctcgtaccc
     6541 taaacttaat cgcaggagat gggcaaacca acgtactaca tttaaatacc ttagattatg
     6601 aacgttggga agattttact aaggaagaag aatggaatga tgtatatgga gaaggctgga
     6661 aaaaattaag aaaattacgt aaaactaaaa atgaaaatcg agatttccaa tttgatgtgc
     6721 taatggcaaa tccgcctttt gccggtgata ttaaagaaac tcgtatatta gctcgctatg
     6781 aattaggcaa aaatagcaaa ggaaaacagc aatccaaagt cggacgagat attttattta
     6841 ttgaacgcaa tttagatttc ttaaaagacg gtggacgaat ggcgattgtg ctaccacaag
     6901 ggcgttttaa caattccagc gataaatata ttcgtgattt tattgcagag cgttgccgca
     6961 ttttagctgt tgtgggctta cacggaaatg tgtttaaacc acataccggc acaaaaactt
     7021 ccgtactatt tgtgcaaaaa tggcacgatg aactttgccc gaaagtagag gattacccga
     7081 ttttctttgc cacaatgcag aaatccagca aagataattc aggcgataaa atctatgtta
     7141 aaaacgctga tggcacactc aaattagaca accatcaaca cctaattgtg gagcacgatc
     7201 tatttaatca cgataatagt acccaagacg gcattgcaga agcctttatt gaatttgcta
     7261 aaaaagaaaa gctctctttt gtgggaaagg attaagccca tttgaccctg ctaaatatca
     7321 ggcattgtta gatgggctag aggtgagcga ggtttatttg agtaaggttc gttctgcaag
     7381 ttattcggaa cgaatggata gtactttctt tttgaaaaaa tacttaaacc atccgagttt
     7441 taattttcca ttatcgctga atgaggtttc tctgattaaa agtggtacaa caccaacaga
     7501 tcgagatgat aacttaaaag agggggttgt cttattaaaa accaatgata ttaggaataa
     7561 tctattaaat aagtactctt cggtagatta ttttattagc gaagatatca atgagaaaat
     7621 gatttcatca caactgaaag aaggggatgt tttagtaaat atcgttggtg caactttgga
     7681 ggttgttggt cgggtagctt atgttagtag cacttttcca aaagcaaata ttacacaagc
     7741 aatgt
//
LOCUS       DANLXD010000107         7712 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.107, whole genome shotgun sequence.
ACCESSION   DANLXD010000107 DANLXD010000000
VERSION     DANLXD010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7712
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.107"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            67..2415
                     /locus_tag="PXD18_002130"
     CDS             67..2415
                     /locus_tag="PXD18_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDL6302518.1"
                     /translation="MLISAQFSPLVWAENNDVAVLDEVSVVGSTPSISQGSEVTLLKV
                     SDKIIAGKEFKKRSATLGNALASELGVHSNPFGGGASKPIIRGQEGARIRILQNGSDV
                     IDMSNLSPDHAVVADSLLADQVEILRGSSTLLYASSSPVGIVNVVDKRIPTAIPEKGY
                     EVELNSRFDTAAKEKVGALGATFGIGNHIAVRVEGLSRHSDNYRVPGINLGERLNYVP
                     DTYNKSKVGTLGLSFVGERGYIGASYSKRRDNYGLPGHNHKFDFCTGHIYGNKRDKYA
                     YTYLYPHLIGEENIGSNPHFHCGTNHAEDGTHSHDNPFGHAHDHTHKGPWVDLESKRI
                     DVKAELRQPFKGVDKIKASYADADYYHDEKDAGVLATRYHKQLKKDQDYGKPVNIFKN
                     RGKNTRLEVYHAPLGGLTGVWGVQYQTQKSSMNAPKDREVKFPLVENTNKQFSLFGVE
                     QYMWDSVAVELAGRMEKQKIEIEYDRNEIKRLQEHYRISGGKQVEPDLSPYDETAYAY
                     SGTLNWFFHPDYQLSFTASHNERLPTPMELYYHGQHIATNSFEYGNKDLKKEQSNNVE
                     LGLGYQAERIGYKVSVYYNHFKNYIYNENLFRENQLFMRRYNQAKARFYGVEAEASYR
                     FNDQYQATIFGDMVRGWLTNLPPLKINSDYSVFKDYLPENVEKGKDYLLYRADQNTPR
                     TPPMRLGFRFNAEFTPNWSGDLELIRTFTQRRTSQLEYITEGNTMLNVGLSYSNKWKE
                     LDYKISLNGTNLLNQPVYIHTSYHQFVPQMGRNFMLGMEMKF"
     gene            2772..5042
                     /gene="nrdA"
                     /locus_tag="PXD18_002131"
     CDS             2772..5042
                     /gene="nrdA"
                     /locus_tag="PXD18_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018356743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDL6302519.1"
                     /translation="MNKSLMVTKRNGTREQLNLDKIHRVITWAAEGLENVSVSQVELR
                     SHIQFYEGIRTSDIHETIIKAAADLITKDTPDYQYLAARLAIFHLRKKAYGQFEPPHL
                     YEHVKKLVALGKYDADLLSDYTPEEWETMNGFIDHWRDMTFSYAAVKQLEGKYLVQNR
                     VSGEIYESAQFLYLLVAACLFSKYPTASRLDYIRRFYDATSTFKISLPTPIMAGVRTP
                     TRQFSSCVLIECDDSLDSINATSAAIVKYVSQRAGIGINAGAIRALGSPIRGGEAFHT
                     GCIPFYKHFQTAVKSCSQGGVRGGAATVYFPIWHLEAESLMVLKNNRGVEENRARHMD
                     YGVQINKMMYQRLIKGGEISLFSPSDVPGLYEAFFADQAKFEQLYLQYEQDPSIRQRK
                     VKAVELFSLLMQERASTGRIYIQNVDHCNTHSPFNPRVAPIRQSNLCLEIALPTKPLA
                     HFYDEQGEIALCTLSAFNLGTLSNLDELEELADLVVRALDALLDYQDYPVLAARNSSL
                     NRRALGVGVINYAYYLAKNQVRYSDGSANNLTHRTFEAIQYYLLKASMNLAKEQGACA
                     YFDQTTYAKGLLPIDTYKKEIDELTQEPLHYDWEQLRQDILQFGLRNSTLTALMPSET
                     SSQISNATNGIEPPRGYISVKASKDGILKQVVPEYERLKAYYELLWDIPNMDGYLHLV
                     GIMQKFVDQAISANTNYDPNRFAEAKVPMKVLLKDLLTAYKYGLKTLYYQNTRDGAED
                     VQDDLDEGCAGGACKI"
     gene            5069..6199
                     /gene="nrdB"
                     /locus_tag="PXD18_002132"
     CDS             5069..6199
                     /gene="nrdB"
                     /locus_tag="PXD18_002132"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDL6302520.1"
                     /translation="MAYTTFSQHKNDQLKEPMFFGQNVNVARYDQQKYEIFEKLIEKQ
                     LSFFWRPEEVDVSQDRIDYAQLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWTFSETIHSRSYTHIIRNIVNDPSIVFDDIVTNEEIIKRAKDISAYYDD
                     LIRDSQLYSLYGEGSYQVDGKTCEVSLRSLKRQLYLCMMSVNALEAIRFYVSFACSFA
                     FAERQLMEGNAKIIKFIARDEALHLTGTQHILNIMAYGNDDPEMAEIARECRQEAYEL
                     FLSAAEQEKAWAEYLFKDGSMIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIP
                     WINAWLVSDNVQVAPQEVEVSSYLVGQIDAKVDSRDFGDFEL"
     gene            complement(6280..7050)
                     /locus_tag="PXD18_002133"
     CDS             complement(6280..7050)
                     /locus_tag="PXD18_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HDL6302521.1"
                     /translation="MTITNTELEQILNTKLNSSAINDYAPNGLQVEGKREIKKIITGV
                     TATLPLIEKAIEKNADAILVHHGYFWKSENPCIRGMKGKRIKQLLVNDINLFGYHLPL
                     DIHSELGNNAQLAKHLGVKNLQGLEDRPNSIPMYGELENPISANELKQKLEKTLQRTV
                     ILCDEFVHSPQKMIKTIGICSGGGQGYIDLAFEKGCDAFISGEISEQTTHSAREQGIY
                     YFACGHHATERDGVKALGEWLAVEYGLDVEFIDIDNPA"
     gene            complement(7134..>7712)
                     /locus_tag="PXD18_002134"
     CDS             complement(7134..>7712)
                     /locus_tag="PXD18_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDL6302522.1"
                     /translation="TTIMQRISGAKQIDSLTVKIKDDIESQTAEKSIAELLVAKHGKK
                     DFFIMNSDTIKQTITSTTNTMTLLISSIALISLIVGGIGVMNIMLVSVTERTREIGVR
                     MAIGAKQRNILQQFLIEAVVICLIGGVIGILLASAIIWAFNTLGTNFKMMLSPESVII
                     AVLCSTLIGVVFGYIPARNAAQLNPITALAQE"
BASE COUNT         2281 a         1456 c         1692 g         2283 t
ORIGIN      
        1 tgcagtacct tattatcctt aattttttta aggagaaaga ttgtgtttaa gaaaacagga
       61 ttggcattgc tgatttcggc tcaatttagc ccgcttgttt gggcggaaaa taacgatgta
      121 gcggtgttag atgaagtttc ggtcgttggc agcactccaa gtatatcgca ggggagtgaa
      181 gttaccttgc taaaagtcag tgataaaatt attgcaggta aggaatttaa aaagcgttcg
      241 gcaacgctgg gtaatgcgtt ggcgtcagaa ttaggcgtgc atagtaaccc gtttggtggc
      301 ggagcgagta agccgattat tcgtgggcag gaaggggcga gaattcgcat tttgcaaaac
      361 ggttcagacg tgattgatat gtcgaaccta tctcctgatc acgccgttgt tgctgattca
      421 ctgcttgccg atcaggtcga aatcttgcgt ggttccagca ccttgcttta tgccagcagt
      481 tcgccggtag gaattgtaaa tgtggtggat aaacgtattc cgaccgctat tcctgaaaag
      541 ggatatgagg ttgaactcaa tagccgtttt gataccgccg ccaaagagaa agtcggcgca
      601 ttaggggcaa cctttggcat cggtaaccac attgcggtgc gagtcgaagg gctgagtcgt
      661 catagtgata actaccgtgt gccggggatc aacttaggcg agcgcttaaa ctatgtgccg
      721 gacacttaca ataaatccaa agtcggcacg ttgggcttat cctttgtcgg tgaacgaggc
      781 tatattggtg cctcatacag caaacggcgg gataattatg gcttgccggg gcataaccat
      841 aaatttgatt tctgtaccgg tcatatctac ggtaataagc gggataaata cgcttatacc
      901 tatctctatc cgcatttgat tggtgaggaa aatattggga gcaatccgca cttccactgt
      961 ggaaccaacc acgccgagga cggcacacac agccacgata acccgttcgg acacgcccac
     1021 gatcacactc acaaaggccc gtgggtggat ttagaatcaa aacggattga tgtgaaagcc
     1081 gagctacgcc agccgtttaa gggcgtagat aaaattaagg caagctatgc tgatgccgat
     1141 tattaccacg atgaaaaaga tgcaggcgtg cttgccaccc gttaccataa acagctgaaa
     1201 aaagatcagg attacggcaa gccggtgaat attttcaaaa atcggggcaa aaatacccgc
     1261 ttggaggtct atcacgcacc gctaggtggc ttaaccggtg tatggggtgt tcagtatcaa
     1321 acgcaaaaaa gcagtatgaa tgcgccgaaa gatcgcgaag tgaaattccc gctggttgaa
     1381 aataccaata aacagttcag cctgtttggg gttgagcagt atatgtggga tagcgttgct
     1441 gttgagcttg ccggacgaat ggaaaagcag aagattgaga ttgagtatga tcgcaatgaa
     1501 atcaaacggt tacaagaaca ctaccgtatc agtggcggca aacaggttga gccagatctt
     1561 tcaccctatg atgaaacggc ttatgcctat tccggcacgc ttaactggtt cttccaccct
     1621 gactatcagc tttcgtttac tgcctcgcac aatgaacgct tgccaacgcc aatggagctg
     1681 tattatcacg ggcagcatat tgctactaat tcgtttgaat acggcaataa agacttgaaa
     1741 aaagagcagt caaataatgt ggagttgggc ttgggctatc aagctgaacg tattggctat
     1801 aaagtgagtg tttattacaa tcactttaaa aactacatct acaatgaaaa tcttttccgt
     1861 gaaaatcagc tatttatgcg ccgttataat caggcaaaag cccgttttta cggggtagaa
     1921 gcagaggcaa gctaccgctt taacgaccaa taccaagcca cgattttcgg cgatatggta
     1981 cgaggctggc taacaaattt accaccattg aagataaata gcgattatag tgtgttcaaa
     2041 gattatctgc cggaaaatgt ggaaaaaggg aaagattatc ttctatatcg ggctgaccaa
     2101 aacacccctc gtacaccgcc aatgcgttta ggttttcgct ttaatgcgga atttacccca
     2161 aattggtcgg gggatttaga gctgatccgc acctttaccc aacgccgtac gagccagttg
     2221 gaatatatta ccgaaggtaa tacgatgttg aatgtcgggt tgtcgtatag caataagtgg
     2281 aaagagctgg attacaaaat cagtctaaac ggcacaaact tactgaatca gccggtgtat
     2341 atccacactt cgtatcacca atttgtacca caaatgggac gaaattttat gttgggaatg
     2401 gagatgaaat tttaagttct cgacataaca agacaagcgg ttattttttc ttcaaatttt
     2461 gcaaaaaaac ggctaaaaat aaccgcttgt ttaaaactca ggtattggta atttggataa
     2521 aatagtgctg tttttccttt cttgttattt tcggagctta ccaaaatttc ctgtttgttg
     2581 ttaaataaga caattaactt tatcccttta ttaaaaatat ggttatttat aaataactta
     2641 gcatctgtca agagaaaaag taaaaattta ttggttgatg ttttgcttta agcacactat
     2701 cttgtgttta ctttaatgaa aaacacaaga tgtagtgttt tactaaggta ttttataaag
     2761 ggttaataat tatgaataaa agtttaatgg taacaaagcg taatggcacg cgcgagcaac
     2821 tcaatctaga taaaattcat cgtgtgatta cttgggcggc agaagggtta gagaatgttt
     2881 ctgtttcaca agtagaactc cgttctcaca ttcaatttta tgaaggtatt cgcacttcag
     2941 atattcatga aactattatc aaggctgcag ctgatctaat cactaaggat acgccagatt
     3001 atcaatattt agccgcacgc ttggcgattt tccacttacg caaaaaagct tatggacaat
     3061 ttgagccacc gcatttatat gagcacgtta aaaaattagt tgcgctaggt aaatatgatg
     3121 cagacttgct gagcgactat acgcccgaag aatgggagac aatgaatgga tttattgatc
     3181 actggcggga tatgacgttt tcctatgcag cagtaaagca gttggaagga aaatatttag
     3241 tgcagaatcg tgttagcgga gagatttatg aatcggctca atttttgtat ttactcgtag
     3301 ctgcctgttt attttctaag tatccaacag caagccgctt agattatatt cgccgttttt
     3361 atgatgcgac ttccactttc aaaatttctt tgccaacacc gattatggca ggagtgcgta
     3421 cacctactcg tcaatttagt tcctgtgtgt taattgagtg tgatgatagc ttagattcca
     3481 tcaatgcaac ctcggctgca atcgttaaat atgtttcaca gcgtgctggg atcggtatta
     3541 atgccggcgc aattcgggca ttaggtagcc ccattcgtgg tggagaagca tttcataccg
     3601 gctgtattcc cttttataaa cattttcaaa ctgcagtaaa gtcttgctct caaggtggtg
     3661 ttcgcggtgg agcggctacc gtgtattttc cgatttggca tttggaagca gaaagcttaa
     3721 tggtattaaa aaataaccgt ggtgtggaag aaaaccgtgc tcgccatatg gattacgggg
     3781 tacagattaa taaaatgatg tatcaacgtt taattaaagg cggtgagatt agtttattta
     3841 gtccatcaga tgtgccgggg ttatatgaag cgttttttgc tgatcaagct aaatttgagc
     3901 aactttattt gcaatatgag caagatccga gcattcggca acgtaaagtt aaagctgtag
     3961 aattgttttc attactgatg caagagcggg cttcaacagg gcgaatttat attcagaatg
     4021 tcgatcattg taatactcat agcccattta atcctcgtgt cgcaccgata cgccaatcga
     4081 acctctgctt agaaattgct ttgccaacta agccactggc acatttttat gatgaacaag
     4141 gggaaatcgc attatgtaca ttatcggcat ttaatttagg cacactcagc aatttagatg
     4201 agttagaaga attggctgat ttagtggttc gtgcgctaga tgccctatta gattatcaag
     4261 attatccggt attagctgca cgtaacagct cattaaatcg tcgcgcatta ggtgtaggcg
     4321 tgattaacta tgcttactat ttagctaaaa accaagtgcg ttattccgat ggcagtgcta
     4381 ataatttaac tcaccgtacc tttgaagcga ttcagtatta tttattaaaa gcatcgatga
     4441 atttagccaa agaacaaggg gcgtgtgctt attttgatca aaccacttat gccaaagggt
     4501 tactccctat cgatacttat aaaaaagaaa ttgatgaatt aactcaagaa ccgcttcatt
     4561 atgattggga acaactacgt caggatattc tgcaatttgg cttgcgcaat tccactttaa
     4621 ctgccttaat gccatcggag acttcgtcgc aaatttcgaa tgccaccaat ggaattgaac
     4681 ctccgcgtgg ctatattagt gttaaagcat caaaagacgg tattttaaag caggttgtgc
     4741 cggagtatga acgtttaaaa gcatactatg aactgctttg ggatattcct aatatggacg
     4801 gatatttgca tttggttggg attatgcaga aatttgttga ccaagcgatt tcggcgaata
     4861 caaattacga cccaaaccgc tttgcagaag ctaaagtacc gatgaaagta ttattaaaag
     4921 atctattaac ggcgtataaa tacgggttaa aaacccttta ctatcaaaat acccgtgatg
     4981 gagcagaaga tgtgcaagac gacttagatg aaggctgtgc tggtggtgct tgtaaaattt
     5041 aataagaaca gaaataaagg agaataacat ggcatatact acgttttcac aacataaaaa
     5101 tgatcaacta aaagaaccca tgttttttgg acaaaatgtg aatgtggcgc gttatgatca
     5161 acaaaaatac gaaatttttg aaaaactgat tgaaaaacaa ctctcatttt tctggcgacc
     5221 ggaagaagtg gatgtgtcac aagaccgcat tgactatgcc caactgcctg aacatgaaaa
     5281 gcacattttt atcagcaatt taaaatacca aaccttgttg gattccattc aagggcgtag
     5341 cccgaatgtg gcgcttttgc cattagtgtc tatccccgag cttgaaacct ggattgaaac
     5401 ttggacattt agcgaaacaa ttcacagtcg ttcttacaca catatcatcc gtaatattgt
     5461 caatgatcca tcaatagtat ttgatgatat tgtcacaaac gaagaaatta ttaagcgtgc
     5521 caaagatatt tccgcctatt atgatgattt gattcgtgac agccaactct atagtttgta
     5581 tggtgaaggc agttatcagg ttgatggaaa aacctgtgag gtcagtttgc gtagtctaaa
     5641 aagacaactt tatctctgta tgatgagtgt gaatgcgctt gaagcaattc gtttttatgt
     5701 ctcttttgct tgctcatttg cctttgcgga acggcagctt atggaaggaa atgccaaaat
     5761 catcaaattt attgcacgtg atgaagcatt acatcttacc ggcactcagc atatattgaa
     5821 tattatggcc tatggcaatg atgatcctga aatggcagaa attgcacgtg aatgtcgcca
     5881 agaggcctac gagctttttt taagtgcagc tgaacaagaa aaagcgtggg cggaatacct
     5941 gtttaaagac ggttcgatga tagggctaaa tcgggatatt ttggtgcaat atattgaata
     6001 tatcactaat attcggatgc aggctgttgg actaccatta ccatttaagg cacgttccaa
     6061 ccccattccg tggatcaatg cgtggttggt ttccgataat gtacaggtag caccacaaga
     6121 agtggaagtc agttcttatt tggttggcca gattgatgct aaagtagata gccgtgattt
     6181 tggcgatttt gaactttaga ctatgatata caagcggttg atttttagtg attttttgca
     6241 aattgcaaaa ttttcaggaa attcaaccgc ttgtattttt tatgcagggt tatcaatatc
     6301 aataaattca acatctaaac catattcaac ggctaaccat tcacctaagg cttttacgcc
     6361 atctcgttcc gtggcgtgat gaccgcaagc aaaataatag attccttgtt cacgggcaga
     6421 gtgagtggtc tgttcggaaa tttcgccact aataaaggca tcacagcctt tttcaaaggc
     6481 taaatcaata tagccttgtc ctccgccgga gcaaatccct attgttttaa tcattttttg
     6541 tgggctatga acaaattcat cacataaaat aacggtgcgt tgtaacgttt tttcaagttt
     6601 ttgtttcagt tcattggcgg aaatcggatt ttctaattca ccgtacattg gaattgaatt
     6661 aggtctgtct tctaaacctt gtagattttt tactcctaaa tgcttagcaa gctgggcgtt
     6721 gttacctagt tcggagtgaa tatccagtgg taggtgataa ccaaagagat tgatgtcatt
     6781 cactaaaagc tgtttaatgc gtttaccttt cattcctcga atgcacgggt tttcactttt
     6841 ccaaaaataa ccgtggtgga ctaaaattgc atcggcgttt ttctcaatcg ctttttcaat
     6901 caggggaagt gtagctgtca caccggtaat aatttttttg atctctcttt tcccttcaac
     6961 ttgcaagcca tttggggcat agtcgttaat ggcggagctg ttgagtttgg tgttcagaat
     7021 ttgttctagt tcagtattgg ttattgtcat tttatctcct taaacttggc ataataatgg
     7081 atgtaggggc aaaaaatttt ttgcccctac agtgtagcag atagttatcg catttactct
     7141 tgtgccagag cagtaattgg gtttaattgg gcggcgtttc ttgccggaat gtagccaaat
     7201 accacaccga taagtgtaga gcagagcacg gcaataatca ccgattccgg tgaaagcatc
     7261 attttaaaat tcgtacctaa ggtattaaat gcccaaataa tagcgcttgc cagtaaaatg
     7321 ccaatcacac cacctattag gcaaataacc accgcctcaa ttaaaaattg ttgcaaaata
     7381 ttgcgttgtt ttgcgccaat cgccattcgg acaccaattt ctcgggtgcg ttcggtgacg
     7441 gaaacgagca taatattcat taccccgata ccaccgacaa tcagcgaaat aagggcgata
     7501 gaggagatca gcaaagtcat tgtattggtg gtactggtaa tggtttgttt gatcgtatca
     7561 ctattcataa taaagaaatc ttttttgccg tgtttagcta ctaacaattc ggcaatgctt
     7621 ttttcggcag tttggctttc aatatcatct ttaattttaa ccgtgagtga atctatctgt
     7681 tttgcacctg aaatgcgttg cataatagtg gt
//
LOCUS       DANLXD010000108         7652 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.108, whole genome shotgun sequence.
ACCESSION   DANLXD010000108 DANLXD010000000
VERSION     DANLXD010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7652
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.108"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(34..1869)
                     /gene="glmS"
                     /locus_tag="PXD18_002135"
     CDS             complement(34..1869)
                     /gene="glmS"
                     /locus_tag="PXD18_002135"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HDL6302523.1"
                     /translation="MCGIVGAVAQRDIAEILVDGLHRLEYRGYDSAGVAVLNADDKTM
                     QIVRRVGKVKALDEALDTKPLLGGTGIAHTRWATHGEPSETNAHPHRSGKIAVVHNGI
                     IENYEELKIVLQERGYVFQSQTDTEVIAHLVEWELRSASSLLEAVQKTVVQLRGAYGT
                     VVLNEEEPEHLIVARSGSPLVIGYGVGENFLASDPLALLSVTRRFAYLEEGDVAEITR
                     RTVDIYDREGNKAEREIHEGNFEADAADKGQYRHYMQKEIFEQPVAIMNTLDGRIKDG
                     KVDISAIAPNAAEILSKVEHVQIVACGTSYNAGMVSRYWFESIAGVSCDVEIASEFRY
                     RKFVTRPNSLLITLSQSGETADTLAALRLAKESGYMAAMTVCNVASSSLVRESDFAFL
                     TKAGVEIGVASTKAFTTQLTCLLLLNVAIGRLQGRMSEEQEHHIVQSLQRLPAQIESA
                     LVFDKQIEKLSEDFADKHHTLFLGRGEYYPVAMESALKLKEISYIHAEAYAAGELKHG
                     PLALIDSDMPVVVVAPENDLLEKVKSNIEEVRARGGQLYVFADHDAGFEEAEGFKTIV
                     MPKVDEVTAPIFYTVPLQLLSYHIALIKGTDVDQPRNLAKAVTVE"
     gene            complement(1917..2678)
                     /locus_tag="PXD18_002136"
     CDS             complement(1917..2678)
                     /locus_tag="PXD18_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR family transcriptional regulator"
                     /protein_id="HDL6302524.1"
                     /translation="MSKRNTQQRRHLIVQMVQEKNEVSVDELAHFFETSEVTIRKDLT
                     ALEESGFLLRKYGGAVKIPSEMMEEAFIEQLSIQKKMIAQAARDCIRDHNRIIIDSGS
                     TTGALVKALNQTGLVVMTNSLNLATELTSLECEPTVLMTGGTWDSRSESFQGKVAEQV
                     LRSYDFDQLFIGADGLDLARGTTTFNELVGLSQVMAEVSREVIVLIESQKIGRKMPNI
                     ELKWQNITKIITDSQLSFETKEQIEKMGVEVVIAK"
     gene            complement(2835..3035)
                     /locus_tag="PXD18_002137"
     CDS             complement(2835..3035)
                     /locus_tag="PXD18_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HDL6302525.1"
                     /translation="MKSILKVVGAMVLMVAVSGCNNMTKTQRNTAIGAAIGGVAGHAI
                     GESTGATLGGAALGGVIGSQIK"
     gene            3260..4294
                     /locus_tag="PXD18_002138"
     CDS             3260..4294
                     /locus_tag="PXD18_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6302526.1"
                     /translation="MKLKKLSLALSTLLLGSAFANSALAEGRLTVYCSATNELCEQEV
                     QAFGKKYNVKVAFVRNGSGSTLAKIEAEKNNPQADVWYGGTLDPHSQAAEMGLLEPYK
                     SPNLEQIIEKFRDPAKLKGNYSSAVYMGILGYGVNLDRIKKLGIEKVPSTWEDLLDPR
                     LAGEIQIADPQSSGTAYTAIATFVQLLGEEKAFDYFRKLHKNISQYTKSGITPARNTA
                     RGETAIGIGFLHDYAIEKKNGANIEMTAPTDGTGYELGGVSILKGARNLDNAKLFVDW
                     SLSKEAQELSWQKGNAFQVLTNTTAESSPYALDPKNLNLINYDFEKYGSSEERKRLID
                     KWVNEVKLAK"
     gene            4362..6398
                     /locus_tag="PXD18_002139"
     CDS             4362..6398
                     /locus_tag="PXD18_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016534092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL6302527.1"
                     /translation="MQNFSFSRPLVWVLIGLLGFLLLPSKALDYGLFDSTSDELLAAM
                     GWASLNITWAWFLPLLVFLLPNSTACKTRAKLELVGLGVLFAFIFLSAIVLKISLGYA
                     VLPLIIAIMGLATPNLATLKVMQGDRFIIGSLLSIILLIFFFIVYPTIAIFVSMFYNG
                     SEFVPSQVLTILQQPYVVRVIGNSLSVAGTVGVLSTLFGLAFALYTTRIAKRSAFIGR
                     IFSILPIVTPPFVVGLGVTLMLGRSGYVTEFLVDYFGFANNWLYGFTGIVIAHTLALT
                     PMSFMILEGALKSIHPSVEEAAYTLRSNRYQAFFNIIFPLLKPALANSFLVVAIQSLA
                     DFSTPLVLGGSFDVIATQIYFYIAGSQLDYASASTLGAILLVFSLAIFVIQYLWIGNR
                     SYVTVSGKSYRGDVQDLPSGMKWLIICTLLFWGTFNLVLYGSIFYGSFTVNWGVDYTL
                     TLDNYIKLFGQGFSDGGFPSLIQTVIFAAAAAPITALFGLLIAYVTVRRDFKGKKTLE
                     FLTLLCFAVPGTVAGVSYILAFNDAPIYLTGTGMIIILSMVMRNMPVGMRAAIAGLGQ
                     LDKSLDEASLSLKAGSFKTMLFVVLPLLKPALLSALVTSFVRAMTTVSAIVFLVTADT
                     RVATSYILNRVEDGEYGIAIAYGSILIVVMMAIILIFDWIVGDTRIARSKAKKM"
     gene            6496..7545
                     /gene="fbpC"
                     /locus_tag="PXD18_002140"
     CDS             6496..7545
                     /gene="fbpC"
                     /locus_tag="PXD18_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric ABC transporter ATP-binding protein"
                     /protein_id="HDL6302528.1"
                     /translation="MNNDFLVLKNVTKSFGKVTVIDNLNLSIPQGKMVTLLGPSGCGK
                     TTVLRLVAGLENPTSGQIFIDGEDVTQSSIQHRDICIVFQSYALFPHMSIGDNVGYGL
                     KMQGVPKEERLQRVKEALELVDLGGFEDRFVDQISGGQQQRVALARALILKPKVLLFD
                     EPLSNLDANLRRSMREKIRELQQRLNITSLYVTHDQSEAFAVSDEVIVMNKGKIMQKA
                     PAKELYLRPNSLFLANFMGESSIFEGTIAGNQININGYQFTLANAEQFELPDGEYLVG
                     IRPEAIHLAEQGNISQLCKIKNAVYMGNHWEIIAEWEGKDLLVNTKPENFYPHIKQAY
                     VHFIEQGVFLLKKEL"
BASE COUNT         2084 a         1728 c         1558 g         2282 t
ORIGIN      
        1 aaaaccccaa gatatcttgg ggtttaacta acattactct acagtcaccg cttttgcaag
       61 gttacgaggt tggtcaacgt ccgttccttt gattaaggca atgtgatatg aaagtagttg
      121 taacggcacg gtgtagaaaa tcggtgcggt tacttcatca actttcggca ttacaatcgt
      181 tttgaagcct tctgcttctt caaaacctgc atcgtgatcg gcaaacacat ataactgacc
      241 gcctcttgca cgcacttctt caatattgga tttcactttc tcaagcaagt cattttccgg
      301 tgctaccacc actaccggca tatcgctatc aattaatgct aacgggccgt gttttaactc
      361 gcctgcggca taagcttctg cgtgaatata tgaaatctct tttaatttca atgcagattc
      421 catcgcaacc gggtaatatt ctccacgacc taagaacaat gtgtggtgtt tatccgcaaa
      481 atcttccgat aatttttcga tttgtttatc gaacactaac gcactttcaa tttgtgctgg
      541 taagcgttgt aaagattgca cgatatggtg ttcttgctct tcactcattc tgccttgtaa
      601 gcgtccaatc gccacattta ataacaataa gcaagttaat tgagtagtga atgctttggt
      661 tgatgctaca ccaatttcaa caccagcttt ggttaagaat gcaaaatcgg attcacgcac
      721 taatgaagaa cttgccacat tacacaccgt cattgccgcc atatagccag attctttcgc
      781 taaacgcagt gcagctaacg tatctgcggt ttcacctgat tgtgaaagcg tgattaataa
      841 gctgttcggg cgagtaacga atttacggta acggaattcg gaggcaattt ccacatcaca
      901 gctcacgcct gcaatggatt caaaccaata acgtgaaacc ataccagcat tgtaagaggt
      961 tccacaagcc acaatttgca cgtgttctac tttcgataaa atctctgccg cattcggtgc
     1021 aatggctgaa atatctactt taccgtcttt gatacgacca tctaaggtat tcataatcgc
     1081 aaccggctgc tcaaaaatct ctttttgcat atagtgacga tattgtcctt tatctgccgc
     1141 gtctgcctca aaattgcctt cgtgaatttc acgctctgcc ttgttgcctt cacggtcata
     1201 aatatccact gtgcgacggg taatttcggc tacatcacct tcttctagat aagcaaaacg
     1261 gcgagttacg cttaataatg caagtgggtc tgaagcaagg aagttctcgc ctacaccgta
     1321 accaatcact aacgggctac ctgagcgagc cacaattaaa tgctccggct cttcttcatt
     1381 taataccact gtgccgtaag caccacgcag ttgcaccacg gttttttgta ccgcttccaa
     1441 taatgaagaa gcagaacgca attcccattc aactaaatga gcaatgactt cggtatcggt
     1501 ttgagattgg aacacataac cacgctcttg taacactatt tttaactctt cgtagttttc
     1561 gataatcccg ttatgaacta ctgcaatttt gccactgcgg tgtgggtgag cattagtttc
     1621 tgacggctcg ccgtgcgttg cccagcgagt gtgtgcgatc ccagtgccgc ctaatagtgg
     1681 cttagtgtct aacgcctcat ctaaggcttt gactttaccg acacggcgta caatttgcat
     1741 tgttttatca tctgcattta atactgctac accagcagag tcatatccac ggtattctaa
     1801 gcgatgtaaa ccatcaacca agatttctgc gatatcacgt tgtgctactg cacctacaat
     1861 tccacacata aatttgcttt cctatgttta agtttaaaaa ttcatttgag ctactgctat
     1921 tttgcaataa ccacttcgac acccattttt tcgatttgtt ctttcgtttc aaaacttaat
     1981 tgactgtcgg taataatttt ggtaatattt tgccatttca attcaatatt cggcattttc
     2041 cgaccgattt tttgcgattc aattaacaca atcacttcac ggctcacttc tgccatcacc
     2101 tgacttaagc caactaattc attaaaggta gtcgtgcctc gagccaaatc taaaccgtcc
     2161 gcaccaataa aaagctgatc gaaatcatat gaacgcaata cctgttctgc tactttgcct
     2221 tgaaaggact cagaacggct atcccaagtg ccgccggtca tcaacactgt tggttcgcat
     2281 tcgagggaag tcaattccgt cgctaaattc agcgaatttg tcatcaccac caagccggtt
     2341 tggttcaatg cttttaccaa agctccggtc gtgctgccgc tgtcaataat gatgcgatta
     2401 tgatcacgaa tacaatcacg tgcggcttga gcaatcattt tcttttgaat cgaaagttgc
     2461 tcaataaacg cttcttccat catttccgat ggaattttta ccgccccacc atacttacgc
     2521 aataaaaaac cactttcttc caaagcggtt aaatcttttc taatcgtaac ttcagacgtc
     2581 tcaaagaaat gagcgagttc atctacactc acttcatttt tctcttgtac catttgaaca
     2641 attaaatggc ggcgttgttg cgtgttacgt tttgacatta taatcttcac ttaaatttcg
     2701 tttcaaaact tttgcattat aaagaaagct cgcgaaaaga aaagcagaaa atgcaaaatt
     2761 tacaaaatct atacaaaata aaaccgcttg taatattgat ttacaagcgg ttgatttctt
     2821 gaaatttttt gcaattattt gatttggcta ccaatcacgc caccaagtgc ggcaccacct
     2881 aaagttgcac cggtagattc accaatcgcg tgaccagcca caccgccaat tgctgcaccg
     2941 attgcagtat tacgttgcgt ttttgtcata ttgttacagc cagacacagc aaccattaat
     3001 accattgcac caacaacttt caaaatagat ttcataataa tccctcataa ttaatcaatt
     3061 tcaaataagc caatattctt ggctatgcta taagatttaa tttatttaga aaggttcaac
     3121 tactaccacc tatgaattgc aaattttttc acaatttagg ccgcttgttg attgaactgt
     3181 gagcttgctc acagaatttt atggtatttc ttgctatatt gtatagcaat ctatgcgata
     3241 actcattaag gaaataaaaa tgaaattaaa aaaattatct ttagcactct cgactttatt
     3301 actcggttca gcctttgcca actctgcttt agcggaaggt cgtttaaccg tttattgtag
     3361 tgccactaat gaactttgtg agcaagaagt gcaagcattc ggcaaaaaat ataatgttaa
     3421 agtagcattt gtgcgtaatg gttcaggcag tacattggcg aaaattgaag cggagaaaaa
     3481 caatcctcaa gctgatgtat ggtatggcgg tactttagat ccacattcac aagctgcaga
     3541 aatgggttta ctcgagccgt ataaatcacc gaatctcgaa caaattatcg aaaaattccg
     3601 tgatccggca aaattaaaag gcaactactc ttcggctgtg tatatgggga ttttaggtta
     3661 tggtgtgaat ttagaccgaa tcaaaaaact cggcattgaa aaagtgccta gcacttggga
     3721 agacttgctc gacccacgcc tagccggtga aatccaaatt gccgacccac aaagctccgg
     3781 cacggcttat actgcgattg cgaccttcgt acaactttta ggagaagaaa aagccttcga
     3841 ctatttccgc aaattacaca aaaacatttc acaatatacc aaatccggca tcacaccggc
     3901 acgcaatacc gcccgtggtg aaaccgctat cggtatcggt ttcttacacg actatgcgat
     3961 tgagaagaaa aacggggcta acattgaaat gaccgcacca acagacggca caggctacga
     4021 attaggtggt gtgagtatcc tcaaaggtgc aagaaatctt gataatgcaa aactgttcgt
     4081 ggattggtcg ctttctaaag aagctcaaga actctcttgg caaaaaggca atgcgttcca
     4141 agtattaacc aacaccaccg cagaatcttc cccttatgct ctagatccga aaaacttaaa
     4201 cttaatcaac tatgatttcg agaaatacgg ctcgagcgaa gagcgtaaac gcttgattga
     4261 taagtgggta aatgaagtaa aattagcgaa atagtgttaa tctttccact gaggggataa
     4321 gcaattatcc cctctctaat tataagaatc tgtgaggtgt tatgcagaat ttttcctttt
     4381 cccgaccgct tgtttgggtg cttatcgggt tactcggttt tctcttgtta ccgtctaaag
     4441 ccttagatta tgggctgttt gactcaacct ctgatgaact gctcgccgca atgggctggg
     4501 cgagtctgaa catcacttgg gcgtggtttt taccgctttt ggtattttta ttgccaaatt
     4561 cgaccgcttg taaaactaga gccaagctgg aattagtagg gctgggcgtg ctgttcgcct
     4621 ttattttcct gtcagcgatt gtgctgaaaa tcagcctcgg ttatgcggtg ttgccgttga
     4681 ttattgccat tatggggctt gcgaccccaa atttagcaac gctcaaagta atgcagggtg
     4741 accgctttat tatcggctcg ttactgagca ttattctgct gattttcttt tttattgtgt
     4801 atccgaccat cgccattttt gtgtcgatgt tctacaacgg ctcggaattt gtgccaagcc
     4861 aagtgctgac aattttgcaa caaccttatg tcgttcgagt catcggtaac tcgctctcgg
     4921 ttgccggcac ggtgggcgtt ctctccaccc tattcggctt agcctttgct ctctacacca
     4981 ctcggattgc taaacgctcg gcgtttatcg ggcggatttt ctcgatttta cctatcgtca
     5041 ccccgccgtt tgtggtcggt ttaggcgtaa ccctgatgct tgggcgttcc ggctatgtta
     5101 ctgaattttt agtggattac tttggctttg ccaacaattg gctgtacggt ttcaccggta
     5161 ttgtgatagc ccataccctc gcgctcacgc caatgtcgtt tatgattttg gaaggggcat
     5221 tgaaatccat tcacccatcg gtggaagaag cagcttacac cctgcgttcc aaccgctatc
     5281 aagccttttt taacattatt ttcccattgt taaaaccggc attggcaaac tcctttttag
     5341 tggtggcaat tcaatccctc gccgatttca gtacgccgtt agtattgggc ggtagctttg
     5401 atgtgattgc aacccaaatc tacttctaca ttgccggttc tcaactggat tatgcctctg
     5461 ctagcacgct tggggcaatt ttgttggtgt tctccttagc cattttcgtg atccaatacc
     5521 tctggatcgg caatcgctct tatgtgacgg tgtccggcaa atcctatcgg ggtgatgtcc
     5581 aagacttacc aagcggtatg aaatggctga ttatttgcac cttattgttc tggggaacct
     5641 tcaacttagt gctgtacggc agtattttct acggcagttt caccgtgaac tggggtgtgg
     5701 attatacctt aacccttgat aactacatca agctattcgg gcaagggttt agcgatggcg
     5761 gtttcccttc gttaattcaa accgtgattt tcgctgccgc tgccgccccg attactgcac
     5821 tattcggctt gctgatcgcc tatgtgacag ttcggcgtga tttcaaaggc aagaaaaccc
     5881 tggaattttt aaccctgctc tgctttgccg taccgggaac ggtggcaggt gtttcttaca
     5941 ttctcgcctt taacgatgcc ccgatttacc taaccggcac cggtatgatc atcattctct
     6001 caatggtaat gcggaatatg cctgtgggta tgcgagcggc aattgccggc ttagggcagt
     6061 tggataaatc gctggacgaa gcctcgctct cgctgaaagc cggttcgttc aaaacgatgc
     6121 tgtttgtggt gttaccgcta ctcaaaccgg cactgctctc cgccctcgtc accagctttg
     6181 tgcgggcaat gacgactgtc agtgcgattg tattcttagt caccgccgac actcgtgtgg
     6241 caacctccta cattctcaac cgtgtggaag acggtgaata cggcattgcg attgcctacg
     6301 gctcaatttt aattgtggtg atgatggcga ttatcctgat ttttgactgg attgtcggcg
     6361 acacccgtat cgcccgttct aaggcgaaaa aaatgtaaaa agacatctac tctctccctt
     6421 tatgggagag agacagaaaa atacttcgtt cagaagtatt tttcagagag agggatataa
     6481 ttaaaaggac aatatatgaa caacgatttc ttagtattaa aaaacgtcac caaatctttc
     6541 ggcaaggtga cggtcattga taatctcaac ctcagtattc cgcaaggtaa aatggtgaca
     6601 ttactcgggc cgtccggctg tggtaaaacc accgtactgc gtttagtggc agggctggaa
     6661 aacccgactt cggggcaaat ttttattgat ggcgaagatg ttacccaaag ttcgatccaa
     6721 caccgtgata tttgcattgt gttccaatct tatgcgttat ttccgcatat gtcgattggc
     6781 gataatgtcg gctacggctt gaaaatgcag ggcgtaccga aagaagaacg gctgcaacga
     6841 gtgaaagagg cgttggaatt ggtggattta ggcggctttg aagatcgctt tgtcgatcaa
     6901 atctctggcg gacaacaaca acgtgtcgcc ctcgcccgtg ccttaattct gaaaccgaaa
     6961 gtgctactgt tcgatgaacc gctgagtaac cttgacgcta acttacgccg ttcaatgcgg
     7021 gagaaaatcc gtgaattaca gcaacgttta aacattactt ccctttatgt gactcacgat
     7081 cagtccgaag cctttgcggt ttcagatgaa gtaattgtga tgaacaaggg aaaaattatg
     7141 caaaaagctc cagccaaaga gttatacctt cgccctaatt ctttattctt agcaaatttt
     7201 atgggtgaaa gcagcatttt tgaaggcacg atagctggca accaaattaa tataaatgga
     7261 tatcaattta cgttagcaaa tgctgaacaa tttgagttac ccgatgggga atacttagtt
     7321 ggcattcgtc cagaagctat tcatttagct gaacaaggaa atataagtca actctgtaaa
     7381 attaaaaatg cagtttatat gggaaatcat tgggaaatta tagctgaatg ggaagggaaa
     7441 gatttattag tcaatactaa acctgaaaat ttttaccctc atatcaaaca ggcctatgta
     7501 cattttatcg aacaaggtgt ttttctttta aagaaagagc tataacgaat ttatactaaa
     7561 ttaagaggaa ggtagttata actatttagc aattttgaga aaaataggcc gcatgcaaaa
     7621 tctcttgatg acaagcggtc ttttctcgcc ga
//
LOCUS       DANLXD010000109         7584 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.109, whole genome shotgun sequence.
ACCESSION   DANLXD010000109 DANLXD010000000
VERSION     DANLXD010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7584)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7584)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7584
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.109"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            121..2268
                     /locus_tag="PXD18_002141"
     CDS             121..2268
                     /locus_tag="PXD18_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL6302529.1"
                     /translation="MKRLRYSYLALILGSALPLSAYADGYLSNDNIRQFDARFNFFLA
                     NPLPAPIAKADGRGEAIENLVVKYASDYLNDIYLKEDVIRFRRWQWQDLYTSLDLKTK
                     QKPDYLNTYRLQAEAYFINKQYQEALSQLDQILRRNPNDVHAMAMSVVASRVLENPNT
                     EAERLLALYQISPSIAQKVQQYLHFTDTMLAASYGSEPQTTMIPDTIAVFGQSPNPDG
                     TPSKGLLQRLEKTKEMAEKFPNAKIILSGGPVRYIYAEADVMKKWLIENGVDESRLLL
                     DDVARDTPGNAVGIIDFMKEYGGRKVLGIGTILHLPRAMSVLKSYADSIGYELEIDSA
                     GGGSPPNEKNKKGEALYTFVNVARAMGLFTLGDFENLLAKEQAEKEQREALEKAQQNY
                     LEKLVAERDQAVKNAENSANELEVARQALETAKQAHQQAEEELNKELSKTQEQLKQST
                     EALSRLIIKQNNPFSEHYVVQLNLMEQATYDLYRRLAEIEHTQDWNLWLSDSLSKYRL
                     KNRSTEDYHLLHIGLDHQVSHNWSIGGVFGISQGQIENRTHKVKGTSAGIYAGYRPTS
                     GLFWTNFFNYSHFTNQSGVTKRDNNAYSLSSEIGRNIVMSHQWQITPKLQLGWAKAGS
                     ARMFWAGTGLRLGKVIELNAIKLKPYADISYRFRNRHIDTLDSLSDRHRNVISIGIQA
                     VGNRHYFAIEGSMLHGDALKRSYGLHANYHYQW"
     gene            2281..3399
                     /locus_tag="PXD18_002142"
     CDS             2281..3399
                     /locus_tag="PXD18_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDL6302530.1"
                     /translation="MKKIKTTLSALALSLSLISVNSWAIPADYLSQDNISQYDKAFNF
                     VLAKVLPAPKGKEDGRGAPIEHLVIQYAPDYVDDPYLKEDVLNFRRWYWQAMYASLDQ
                     KVKEKPTYLNTYRLQAEAYFVNKEYREALSQLDQILRQNPRDIHALAMTVLASRVLED
                     TEQETARLSALKQLAPEVAQRMTDFFAFTEQTLAASYGNEPQTAMIPDTIAVFGSTPN
                     KDGTPSPLLLDRLQKTKEMAQKFPQAKIIVSGGAVKTEFAEADVMAKWLSENGIEKDR
                     LLLDPVARDTPGNAVGIIKLMQTYNGKKVLGIGTLQHIPRATAVLKGYAQHIGYPIEM
                     DSVGGGKPATPGKAKIEALYTYVNVARSMGLFELGDFK"
     gene            complement(3460..4722)
                     /gene="rho"
                     /locus_tag="PXD18_002143"
     CDS             complement(3460..4722)
                     /gene="rho"
                     /locus_tag="PXD18_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017492510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HDL6302531.1"
                     /translation="MHLTQLKNTPVSKLVEMGENQMGLENLARLRKQDIVFAILKQHA
                     KSGEDIFGQGVLEILPDGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLQTGDKIEGKI
                     RPPKEGERYFALLKVDSVNDDKPEASRSKILFENLTPLHANSRLKMERGNGSKEDLTA
                     RILDLAAPIGKGQRALIVAPPKAGKTVLLQNIAQSITHNHPECELIVLLIDERPEEVT
                     EMQRTVRGEVIASTFDEPATRHVQVAEMVIEKAKRSVEHKKDVVILLDSITRLARAYN
                     TVTPVSGKILSGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIFE
                     EFKGTGNMELHLSRRIAERRIFPAIDFNRSGTRKDDLLMAADELQKTWMLRKVLNPMD
                     EVDAIEWLIDKLMMAKTNEEFFEIMKRS"
     gene            complement(4908..5855)
                     /gene="cysK"
                     /locus_tag="PXD18_002144"
     CDS             complement(4908..5855)
                     /gene="cysK"
                     /locus_tag="PXD18_002144"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HDL6302532.1"
                     /translation="MTIYADNSYSIGNTPLVRLKNFGNGNIVVKVEGRNPSFSVKCRI
                     GANMVWQAEKDGILTKDKEIVDATSGNTGIALAYVAAARGYKLTLTMPETMSTERKRL
                     LRGLGVNLVLTEGAKGMKGAIAKAEEIAASDPDRYVTLKQFENPANPAIHQQTTGPEI
                     WDATEGKIDVLVAGVGTGGTITGVSRAIKQDKGKQIISVAVEPSESPVITQTLNGEEV
                     KPGPHKIQGIGAGFIPKNLDLSLLDRVEQVSSEEAITTARRLMAEEGILGGISSGAAV
                     AAADRIAKLPEFADKLIVVILPSASERYLSTLLFEGIEA"
     gene            complement(6029..7525)
                     /gene="pepA"
                     /locus_tag="PXD18_002145"
     CDS             complement(6029..7525)
                     /gene="pepA"
                     /locus_tag="PXD18_002145"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HDL6302533.1"
                     /translation="MEFSVKNGSVEKQRTACLVVGVYEPRRLCSAAEQLDKLSNGYIS
                     TLLRRGDLEGKAGQTLLLHNVPNVLADRVLLVGCGKERELTERQYKQIIQKSVQTINE
                     TGSMEAVSFLTELHVKGRTPYWNVRFAVEAIQEQLYAYNDFKSIKPEVRRELRRVIFN
                     VAHRKDLPDAERALEHGKAVALGISHAKNVANCPPNVCNPHYLAELAKGLAYDYPAIS
                     TTIVDEKQMAELGMNAYLAVSRASENEAFLSVIEYKGNPNADAKPIILVGKGMTFDSG
                     GLSIKPAEAMDEMKYDMCGAATVYGTIKAIAEMKLPLNVIGLLAGCENAVDGKAYRPG
                     DILTTMSGLTVEVLNTDAEGRLVLCDALSYVERFEPELVIDIATLTGACMIALGNHNS
                     GLMSPHNGLANELLAAAEQADDKAWRLPLGEEYQEQLKSNFADLANIGGRLGGACTAG
                     QFLSNFTKKYTWAHLDIAGTAWKSGAAKGATGRPVSLLTQFLINKAQV"
BASE COUNT         2191 a         1519 c         1629 g         2245 t
ORIGIN      
        1 aaaaatgatt ttgaatatta ttaataaaat agcacaaaca aattttatcc ttaatcaact
       61 ttgttggtta gatgtaaaaa gttataaata cttcttcacc caatataagg agaaatcata
      121 atgaaacgct tgcgttattc ttatcttgct ttgatattag gttcagcctt acctttatcg
      181 gcttatgctg acggttattt aagtaacgat aatattcggc aatttgatgc ccgttttaat
      241 tttttcctcg caaatccact acctgcgcct attgcaaaag cagatgggcg tggtgaagcg
      301 attgagaatt tggtggtgaa atatgcatca gattatctta atgatatcta tcttaaagag
      361 gatgttattc gttttcgccg ttggcagtgg caagatctct atacgtcatt ggatttaaaa
      421 acgaaacaaa agcccgatta tttaaatact taccgattac aggcggaagc gtactttatc
      481 aataagcaat accaagaagc attatctcaa ctggatcaaa ttctgcggcg taaccctaat
      541 gatgttcatg caatggcaat gagtgtggtt gcaagtcggg tattggaaaa tcctaatact
      601 gaagccgagc gtttattagc gctttatcaa atctctccaa gtattgcgca aaaggtgcag
      661 caatatctac attttacaga cactatgctt gctgccagct atggtagtga gcctcaaaca
      721 acaatgatcc ccgacaccat agcggtattt gggcaatcgc ctaacccaga cggtactcca
      781 agcaagggat tattgcaacg tcttgagaaa accaaagaaa tggcagagaa atttccgaat
      841 gcaaaaatta ttttaagtgg tggacctgtt cgttatatct atgcagaagc ggatgtaatg
      901 aaaaaatggt tgatagagaa tggcgttgat gaaagcagac tgttgcttga tgatgtggca
      961 cgagatactc cgggaaatgc tgtcggtatc attgatttta tgaaggaata tggaggtaga
     1021 aaagtattgg ggatcggtac gatcttacat ttaccgagag caatgtctgt attgaaaagc
     1081 tatgcggatt ccattggata tgaattggaa attgattctg ccggaggcgg ttctcctcct
     1141 aatgaaaaaa ataaaaaagg tgaagctctt tatacatttg ttaatgttgc tcgtgcaatg
     1201 gggttattta ccttgggcga ttttgagaat ttgcttgcca aagaacaagc tgaaaaagaa
     1261 caaagagaag cgttggaaaa agcacagcag aattatttag aaaaattggt agctgagcga
     1321 gatcaagcag taaaaaatgc agaaaattct gcaaatgagc tggaagtagc cagacaggcg
     1381 ttagaaacag caaaacaggc tcatcagcaa gctgaagagg aattgaataa agaacttagt
     1441 aaaacgcaag agcagttaaa acagagtacg gaagccctta gtcgtttaat aataaagcag
     1501 aacaatcctt tttccgagca ttatgttgta cagcttaatt tgatggaaca agcaacttat
     1561 gatctgtacc gtaggttagc agaaatagaa catacacaag attggaattt atggctttcg
     1621 gatagtctat ccaaatatcg tttaaaaaat cgttcaaccg aagactatca cttattacat
     1681 atcgggctag atcatcaggt ttcccataat tggtctattg gtggagtatt tggtatcagt
     1741 caggggcaaa ttgagaatag gacgcataaa gtgaaaggga catctgctgg tatttatgct
     1801 ggttatcgtc ctacaagtgg tctgttttgg acaaattttt ttaattacag tcattttact
     1861 aatcaatctg gtgtaacaaa acgagataat aatgcataca gtctgagtag tgaaattgga
     1921 agaaatatcg tgatgagtca tcaatggcaa attacgccaa agctgcaatt aggctgggca
     1981 aaagctggat cagcacgaat gttttgggct gggacagggc tacgtttagg aaaagtgatt
     2041 gaactcaatg caatcaaact taaaccttat gctgatatta gctatcgttt tcgaaatcgt
     2101 catattgata ccttagatag tttatctgat cgtcatcgga atgtaatcag tattgggata
     2161 caagcagttg gaaatcgcca ttattttgca atcgaaggat caatgttaca cggggatgca
     2221 ttgaagcgtt catacggatt acacgcaaat tatcactatc aatggtaaat aggagcctct
     2281 atgaaaaaaa tcaaaacaac cctttctgcc cttgctttaa gcctttcttt gataagtgta
     2341 aatagctggg cgataccagc tgattatttg agccaagaca atatcagtca atatgataag
     2401 gcgtttaact ttgtattagc aaaagtactg cctgcaccaa aaggtaaaga agatggtcga
     2461 ggagcgccga ttgagcattt agttattcaa tatgcgccag actatgttga tgacccttat
     2521 ctaaaagagg atgtgctgaa tttccgccgt tggtattggc aagcgatgta tgcttcgctt
     2581 gatcagaaag ttaaagagaa gccgacctac cttaacactt accgtttaca agcagaggcg
     2641 tatttcgtca ataaagagta tcgggaagca ctttctcagc tcgaccaaat tttgcgccaa
     2701 aacccccgtg atattcacgc tcttgcgatg acagtattag cttcaagggt gctagaagat
     2761 actgaacaag aaacggctcg tctttctgca ctgaaacagc ttgctcccga agtcgcacaa
     2821 cgaatgacag acttttttgc ctttaccgaa caaacgctgg cggcaagcta cggtaatgaa
     2881 ccacagacag caatgatccc tgatacgatt gccgtttttg gttctacgcc aaacaaagac
     2941 ggcacacctt cgccgctgtt gttagatcga ttacagaaaa ccaaagagat ggcacaaaaa
     3001 tttccgcaag caaaaattat cgtcagtggc ggtgctgtga aaacggaatt tgctgaggct
     3061 gatgtgatgg caaaatggct tagcgaaaat ggtattgaaa aagaccgttt gctacttgat
     3121 cctgttgcca gagatacccc gggaaatgcg gttgggatta tcaagctgat gcaaacttat
     3181 aatggcaaga aagtattagg tatcggtacg ttacaacata tccctcgtgc aacagcggtt
     3241 ctcaaaggtt atgcacagca cattggttat ccgattgaga tggattccgt tggtggtggc
     3301 aagccggcaa caccgggaaa agccaaaatc gaggcacttt atacttatgt aaatgtggcg
     3361 agatcaatgg ggttgtttga gttgggggat tttaagtagt tactttattg acagctgcta
     3421 ttgataaaaa tcccgcgtta agcgggattt ttttatgttc tacgaacgtt tcataatctc
     3481 gaaaaactct tcgttagttt ttgccatcat taatttgtcg attagccatt cgatagcatc
     3541 tacttcgtcc attgggttga ggactttgcg taacatccaa gttttttgga gttcgtctgc
     3601 tgccattaag aggtcatctt tacgagtacc tgagcggttg aagtcaatag ccgggaagat
     3661 acggcgttca gcaatacggc gtgagaggtg taattccata ttacccgtac ctttgaactc
     3721 ctcgaaaatc acttcgtcca tttttgatcc ggtatccaca agtgcggttg cgataatggt
     3781 taagctgcca ccttcttcca cattacgggc tgcaccgaag aaacgttttg gacgatgtaa
     3841 ggcgttagcg tccacaccac cggaaaggat tttgccggaa accggggtaa cggtgttgta
     3901 ggcacgggct aaacgagtga tggagtctaa taaaatcacc acatcttttt tatgctctac
     3961 cgagcgtttt gctttctcga ttaccatctc cgcaacttga acgtggcggg ttgccggttc
     4021 atcaaaggtt gaggcaatta cttcaccacg tacggtgcgt tgcatctctg ttacttcttc
     4081 cggacgctca tcaattaata atacgataag ctcacattca ggatgattat gggtgatgct
     4141 ttgtgcaata ttttgcagta acacggtttt accagctttt ggcggggcaa caattaacgc
     4201 tcgctgacct ttaccgattg gggcggctaa atctaaaata cgagcggtta aatcttcttt
     4261 tgatccattg ccacgctcca tttttaagcg agaattggcg tgcagagggg ttaagttttc
     4321 aaagagaatt ttactgcgag aggcttccgg tttgtcatca ttaactgaat caactttcag
     4381 tagggcaaaa tagcgttctc cctcttttgg tgggcgaatt ttaccttcta ttttatcgcc
     4441 agtttgtaag ttaaaacggc ggatttggct tggagaaaca taaatatcat cagggccggc
     4501 taaatatgag ctatctgatg agcggaggaa accgaagccg tccggtagaa tttcaagcac
     4561 gccttgcccg aaaatgtctt caccgctttt tgcgtgttgt ttaagaatag caaatacgat
     4621 gtcttgttta cgtaaacgag ccagattttc taagcccatt tgattttcac ccatttccac
     4681 aagctttgaa acaggggtgt ttttaagttg agtaagatgc ataatttgaa tgtaaaattg
     4741 tgattaatta agattggatt tgttgatatt gattagatac ggccaaccgt aaagatgtgg
     4801 cgaagaataa cgcaatagga gacaaattgc aaatttttta taaaaaataa ccgcttgttt
     4861 gcaataaaaa tgccgacatc agccggcatt tttatattaa tttaatatta cgcttcaatc
     4921 ccttcaaaca gtagcgtact taaataacgc tctgaggctg aaggcagaat cactacaatt
     4981 aatttatcgg caaattcagg tagtttagcg atgcgatctg cggcagcaac ggcagcacct
     5041 gatgaaatac cgcctaaaat gccttcttct gccattaaac ggcgtgcggt tgtaatcgct
     5101 tcttcgcttg aaacttgttc aacacggtca agcagtgata aatctaagtt tttcggaata
     5161 aagcctgcac caatgccttg aattttgtgc gggcccggtt tgacttcttc accgtttaaa
     5221 gtttgcgtaa tgaccggcga ttcactcggt tctaccgcca ctgaaataat ttgcttgcct
     5281 ttatcttgct taatagcacg ggaaacaccg gtaatagtgc cacctgttcc tacgcctgcc
     5341 actaatacat caattttacc ttcagttgca tcccaaattt caggaccggt agtttgttgg
     5401 tgaattgccg ggtttgccgg gttttcaaac tgttttaagg taacatagcg atctgggtcg
     5461 gaagccgcga tttcttcagc tttcgcaatc gctcctttca ttccttttgc cccttcggtt
     5521 aagactaaat ttactcctaa gccacgcaat aagcgtttac gctcggtact cattgtttcc
     5581 ggcattgtga gcgttaattt ataaccacga gcggctgcta cataagccaa ggcaattcca
     5641 gtgttaccgc tggttgcatc tacaatttct ttgtctttgg ttagaatacc gtctttctct
     5701 gcttgccaca ccatattcgc accaatacgg catttcacgc taaaacttgg gttacgccct
     5761 tccactttta ccacaatatt gccgttgcca aaattcttta aacgcaccag cggggtattg
     5821 ccgattgagt atgagttgtc tgcatagata gtcatagtga tattccttaa taagtattga
     5881 gattgggatt tatcatactt atttttaatc gcttttctag tagctggaat ttatttgata
     5941 taactaaaaa gaatataggg gcgtatgaag aggatcggtc tgattttctt tttgcaaaaa
     6001 ctcgataaaa tcagaccgct tgtgagagtt agacctgggc tttattgatc aaaaattgtg
     6061 ttagtaagga taccggtctg ccggtcgccc ctttggctgc cccagatttc caagccgtgc
     6121 cggcaatatc tagatgcgcc caagtatatt tctttgtaaa gttagagagg aattgaccgg
     6181 cagtacaggc tccgcctaaa cgtccgccga tattagcaag atcagcaaag ttagatttta
     6241 actgttcttg atattcttcc cctaaaggta aacgccacgc tttgtcatcg gcttgctctg
     6301 cggcagctaa gagttcgttt gctaaaccgt tatgaggtga catcagcccg ctgttatgat
     6361 tacctaaggc aatcatgcaa gcaccagtta gggtagcaat atcaatcact aattccggtt
     6421 caaaacgttc tacatagctg agagcatcac atagcactaa acgtccttct gcatcggtgt
     6481 tgagtacctc aacggttaaa ccagacattg tagtgagaat atcccccggt cgataggctt
     6541 tgccatcaac cgcattttca cagccggcga gtaagccgat aacattgagt ggtaatttca
     6601 tctcggcaat tgctttgatt gtaccgtaaa cagtagcagc tccgcacata tcgtatttca
     6661 tttcgtccat cgcctccgca ggtttaatgg ataaaccgcc agagtcaaag gtcattcctt
     6721 tgccgactaa gataatcggc ttcgcatcag cattcgggtt gcctttatat tcaatcactg
     6781 aaagaaaggc ctcattttca gaggctctgg aaaccgctaa gtaagcattc attcccaatt
     6841 ctgccatctg tttttcatca acaatggtag ttgaaatggc aggatagtcg taggctaaac
     6901 ccttagccaa ttcggctaaa tagtgaggat tacacacatt aggcggacaa tttgctacat
     6961 ttttagcgtg gctgattcca agtgctacgg cttttccgtg ttctaaagct cgttcggcat
     7021 caggaagatc tttacggtgt gcgacattaa aaatcacacg gcgtaattca cggcgaactt
     7081 caggtttgat gcttttgaaa tcgttatagg catatagttg ttcttggatt gcctctaccg
     7141 caaatcgcac attccaataa ggtgttctac ctttaacgtg cagttcggtt aaaaagctga
     7201 cagcttccat tgaaccggtt tcattaatag tttgtacact tttttgaata atttgtttgt
     7261 attggcgttc agttaattca cgctcttttc cacagccgac taataatact cgatcagcga
     7321 gtacattcgg cacattatgc aagagtaagg tttgccctgc tttgccttct aaatctcctc
     7381 ttctcagtaa tgtgctgata tagccgttac ttaatttatc aagctgttct gcggcagaac
     7441 ataatcggcg gggttcatag acaccaacaa ccaaacaggc ggttctttgt ttctcaacac
     7501 tgccattttt gacactaaat tccatttttc ctccttaatt tttattgcta cagattttat
     7561 aatgccaaca taatcatcaa tgat
//
LOCUS       DANLXD010000110         7526 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.110, whole genome shotgun sequence.
ACCESSION   DANLXD010000110 DANLXD010000000
VERSION     DANLXD010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7526)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7526)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7526
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.110"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            43..1506
                     /gene="ubiD"
                     /locus_tag="PXD18_002146"
     CDS             43..1506
                     /gene="ubiD"
                     /locus_tag="PXD18_002146"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HDL6302534.1"
                     /translation="MKYKNLREFLDFLESQGELVRIQQEIDPYLEMTEIADRTLRKGG
                     PALLFENPKGYQMSVLCNLFGTPKRVALGMGQEDTKALRELGKLLAFLKEPEPPKGFK
                     DLIGQLPQWKQILNMPPKVLSKADCQQVVISGDEVDLYKLPIMHCWPGDVAPLVTWGL
                     TITQGPYKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDFQEWKAENPGKPFLVSVAI
                     GADPATILAAVTPVPDTLSEYAFAGLLRGHKTEVVKSISNELEVPASSEIVLEGYIDL
                     EETALEGPYGDHTGYYNEQEYFPVFTVTHITMRKDAIYHSTYTGRPPDEPAVLGEALN
                     EVFIPILQKQFPEIVDFYLPPEGCSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYT
                     KFVIVCDDDVNARDWKDVIWAITTRCDPARDTTLIEHTPIDYLDFASPIAGLGSKMGI
                     DATNKWAGETTREWGTPIEKDDNVVKRIDEIWDSLGI"
     gene            complement(1591..2415)
                     /locus_tag="PXD18_002147"
     CDS             complement(1591..2415)
                     /locus_tag="PXD18_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6302535.1"
                     /translation="MDSLTHLFTQFQFRTDLFHLGQLCQIGSFNEENKGYLHFVRQGR
                     FILNQAAERPITIERPAIIFSPTNILHSLHPLDDSGLDIFCINFDFGKGIRNPLTHTL
                     HNIVILELAQYPELGVLADQIFSEVNQKGCGYQAMIHHLCAYFTLKVARQCLEKGYIQ
                     TGLLKGLADKQLGKVLLAIHNAPERDWNVEELANVALMSRSRFAAYFKQTMGVSPMDY
                     LTNWRLAVAQHLLQKGIPVALVAEQVGYSHNAALSRVFMRELGLSPTEWLAQNKES"
     gene            2542..3387
                     /locus_tag="PXD18_002148"
     CDS             2542..3387
                     /locus_tag="PXD18_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HDL6302536.1"
                     /translation="MMSQEQFEEINQERRQALNHGSRIAMAASVLGALGIASTANAKQ
                     ASAEKSPYAEPEQYGLKRHGMTIDPKRVALVVVDPQIDFLGPKGVMWGVLGDSIKENN
                     TVANIESLFKAAKAVDMPTFVSPHYYYPTDHKWEFGSPGEHFMHDSGMFARKGQYTME
                     GFENSGADFMPEYKPYIFDGKTVITSPHKIFGPETNDLVLQLRKRKIDQVILAGMAAN
                     LCIDSHLRELIEQGFEVTVVKDATAGPRIPEGDGYLAALTNYRIIANDLWTTEEAVKK
                     MTAKA"
     gene            3844..6786
                     /gene="rne"
                     /locus_tag="PXD18_002149"
     CDS             3844..6786
                     /gene="rne"
                     /locus_tag="PXD18_002149"
                     /EC_number="3.1.26.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HDL6302537.1"
                     /translation="MKRMLINATQKEELRVALVDGQRLFDLDIESPGHEQKKSNIYKG
                     KITRVEPSLEAAFVDYGAERHGFLPLKEISREYFPSDYVFNGRPNIKDIIQEGQEVIV
                     QVSKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDERLELKEALDCLDV
                     PEDVGLIVRTAGVGKSPEELQWDLKVLLHHWEAIKKAAESRPAPFLIHQESDVIVRAI
                     RDYLRRDIGEILIDNKKVFEKAKNHIRLVRPDFINRVKLYEGEVPLFSHYQIESQIES
                     AFQREVRLPSGGSIVIDVTEALTAIDINSSRSTRGGDIEETALNTNLEAADEIARQLR
                     LRDLGGLIVIDFIDMTPVRHQREVENRIREATRQDRARIQFARISRFGLLEMSRQRLS
                     PSLSEASSHICPRCQGTGKVRDNESIALSILRLLEEEAIKENTAQVHTIVPVQIASYL
                     LNEKRKAISSIEKRHDVQIVVVPSESMETPHFSVYRLRENEITPTLSYDLTKHYEARH
                     EEEHPHHHHQEDVLVTRNEPVITVESVLQSSELNLQPSPTPTEPPKPSLLSRLIATIK
                     GWFSEEKVEEKPKPKARNQRERRQRRERPNRNAKAENQERKTPQAQTTPAEEKPMRSE
                     KKARRAVVEEVSGVTEQESRSNSREVQTERRQRRDLRKKVRIETQEVEVENLTPAVEE
                     TVAKQVENVQKNQQIQPLATQEVPVETAPEVETTNEGRENNRQRRLPRHLRVGNQRRR
                     ENQRNQVISPMPLTSAVASPELASGKVWVQVTSTVKVEEKASFLSVDQMLEQQENQLV
                     ETEKKSEEKKLHTVSPLGGFVAQATNRDLVKEKQEQLSKPKEEKVASEDVKPVEVKEH
                     IAPFGSVVAQHSERDLVKEKNERVSKFQSQATVAPAIVEEVTNPIEVPKSTYESDYRF
                     NGRLGTFSRVEHTQAAMTIASAPSDKLEVVEISQWQNSKYYFYGKGFGGYTSAVSQVQ
                     SAPRSTNG"
     gene            6932..7492
                     /locus_tag="PXD18_002150"
     CDS             6932..7492
                     /locus_tag="PXD18_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302538.1"
                     /translation="MKKSFLSLLVLGTTMALAACDQAKEAAQSTTDKAVEVKEAVAEK
                     AAEVKSATEAKVEELKAAANDAAQATADKTEEAKKAVAEKATELKTTTEAKVEELKAA
                     ANDAAQATTDKTEEAKKAVAEKAAELKATTEAKVEELKAAASDATQATADKAEEAKKA
                     VAEKAAEVKVETETKVEEMKKAIESK"
BASE COUNT         2434 a         1590 c         1650 g         1852 t
ORIGIN      
        1 tttttctata tacttgcaaa aaaatcgaaa aatatgaccg ctatgaagta taaaaatctc
       61 cgtgaatttc tcgatttcct tgagtctcag ggtgaattag tccgtattca gcaagaaatc
      121 gatccttatt tagaaatgac agaaatcgcc gaccgcacct tacgcaaagg cgggccggca
      181 ttactgtttg aaaacccgaa aggctatcaa atgtcggtgt tgtgtaattt attcggcacg
      241 cccaaacggg tagctctggg aatggggcaa gaagatacca aagctctgcg tgagctgggc
      301 aagttacttg cctttttaaa agagcctgaa ccaccgaaag ggtttaaaga tttgatcggg
      361 caactgccac aatggaagca aattttaaat atgccgccta aggtactgag caaagccgat
      421 tgtcagcaag tggtgatttc gggtgatgag gttgatctct acaaattacc gattatgcac
      481 tgttggccgg gcgatgtcgc tccactggtc acttgggggc tgacgattac gcaagggcct
      541 tacaaaaaac gccagaattt aggcatttat cgtcagcaac ttatcggcaa aaacaaactg
      601 attatgcgtt ggctttccca ccgtggcggt gcgttagact tccaagagtg gaaagccgaa
      661 aacccgggta aaccgtttct ggtgtcggtt gcgattggtg cagatccagc cactatttta
      721 gcggcagtca cccctgtgcc ggatacgctt tcggaatatg cgttcgcagg gctgttgcga
      781 gggcataaaa ccgaagtggt caaatctatt tccaatgagt tagaagtgcc ggcaagtagc
      841 gaaattgtgc tggagggcta tatcgatctg gaagaaaccg cattggaagg cccttatggc
      901 gaccacaccg gctactacaa cgagcaagag tattttccgg tatttaccgt tacccatatt
      961 acgatgcgaa aagatgcgat ttatcattct acctacactg gcagaccacc tgatgaaccg
     1021 gcagtattag gtgaagcatt gaatgaagtc tttattccga ttttgcaaaa acagtttccg
     1081 gaaattgtcg atttctactt gccacctgaa ggctgttctt accgtttagc ggtagtgacg
     1141 atgaaaaaac aatatgccgg acacgctaaa cgggtgatga tgggagtttg gtcgttcctg
     1201 cgtcaattta tgtacaccaa gtttgtgatt gtgtgcgatg acgatgtgaa cgctcgagat
     1261 tggaaagatg taatttgggc gatcaccacc cgttgtgacc cggctcgaga tacgacactg
     1321 attgaacaca cgccgataga ttatctcgat tttgcctcgc caattgcagg gttaggctca
     1381 aaaatgggga ttgatgccac caataaatgg gcgggtgaaa ccacccgaga atggggaaca
     1441 cccatcgaaa aagatgacaa tgtggtgaaa cgcattgatg agatttggga ttctcttggc
     1501 atttaaggca acatttaacc gcttgtgcaa cataacaagc ggttaaattt tttgacattt
     1561 ttaccattcg gctatttgtt tctcatcagg ttacgactct ttattttgag ccagccactc
     1621 ggtaggcgaa agccctaatt cccgcataaa gacacggctg agagcagcat tatggctata
     1681 accgacttgc tctgccacca atgctactgg tatccctttt tgtaataaat gctgggcaac
     1741 cgctagtcgc cagttagtga gataatccat cggtgaaacc cccatcgttt gtttaaaata
     1801 agcagcaaag cgtgagcgag acattaatgc cacatttgcc aactcctcta cattccaatc
     1861 tcgctctggt gcattgtgaa tagctaacag cactttcccc agttgcttat ctgccaagcc
     1921 ttttaacaaa cctgtttgaa tatacccttt ttccaaacat tggcgggcaa ctttcaaggt
     1981 aaaataggca cataaatgat gaatcattgc ctgataacca caccctttct gattcacttc
     2041 actaaaaatt tgatcggcta atacccccaa ttccggatac tgtgccaact ctaagatcac
     2101 aatattgtgc aaggtatgag ttaatgggtt gcgaatccct ttgccaaaat caaaattaat
     2161 acaaaatata tctaacccac tatcatctaa cgggtgcaaa ctatgcaaaa tattggttgg
     2221 tgaaaaaata atcgctgggc gttcaatcgt aatcgggcgt tcggcagcct gatttaaaat
     2281 aaaacgtccc tgacgaacga aatgtaaata gcctttattc tcttcattaa aactcccgat
     2341 ttggcataac tgacctagat gaaataaatc cgtgcgaaac tgaaattggg taaaaagatg
     2401 agtcaaacta tccacattaa gctccttggg taaagaattg agacgaacgg ttaaaacagg
     2461 agaaatgcga tcactataat agcaacccgt tcggtaacgc aagttatcat tacaatttgt
     2521 atatctatta atgaggataa aatgatgtca caggaacaat ttgaagaaat caaccaagaa
     2581 cgccgtcaag cccttaacca cggctctcgt attgcaatgg cagccagtgt attaggtgca
     2641 ttaggtattg catcaacagc aaatgcaaaa caagccagtg cagaaaaatc accttatgcc
     2701 gagccggaac aatacggttt aaaacgccat ggaatgacca ttgatccaaa acgtgtggca
     2761 ttagtggtag ttgatccaca aattgacttc ctaggcccga aaggcgtgat gtggggcgtg
     2821 ttaggtgact caattaaaga aaacaacact gtagctaaca ttgaaagctt atttaaagca
     2881 gcaaaagcag tcgatatgcc aacctttgtt tcgccacact actattaccc gactgatcac
     2941 aaatgggaat ttggttcacc gggtgaacac tttatgcacg acagcggaat gtttgcgaga
     3001 aaaggtcaat acaccatgga aggctttgaa aattcaggtg cagactttat gcctgagtac
     3061 aaaccataca tttttgatgg caaaacagtg attacctctc cacacaaaat ctttggaccg
     3121 gaaaccaatg acttagtgtt gcaattacgc aaacgtaaaa tcgaccaagt aattttagcc
     3181 ggtatggctg ccaacttatg tattgattca cacttgcgtg aattaatcga acaaggtttt
     3241 gaagtaacag tggtgaaaga tgcaaccgca gggcctcgta ttcctgaagg tgacggctac
     3301 cttgcagcat taaccaacta ccgtattatc gcaaatgacc tctggaccac tgaagaagca
     3361 gtgaaaaaaa tgacggcaaa agcataatat tcgctttaca agcggttaaa tttagctctt
     3421 tttttgcaaa tttaaccgct tggatttcac gcttatctcc agcactcaca ctaaatctca
     3481 ttatttttcc ttatcacccc attcattttc attatattca tctccacaac aaataacagc
     3541 taccatacaa caattacctt gcctttttca gggttaaaat gcgataatga ctcgttattt
     3601 ttggcttgaa aaagcaatag aaaattgcaa aaaataaagc aaaaataacc gcttgtaata
     3661 gagataaaca agccttaagt gattgatttt gcagtttctt taagacaaga caaagtaaac
     3721 gtaagacaac catcaatgca ctatcgggaa tgaagacagt cgtgagatag acattaaatc
     3781 cattccctta ttaatgggtc aaaatgaccg tgtaagacaa aaacaaaata atgagaaaac
     3841 acaatgaaaa gaatgttaat caatgcaact caaaaagaag agttgcgtgt tgccctcgtt
     3901 gatgggcaac gcttatttga cttggacatt gaaagcccgg gtcacgaaca gaaaaaatcc
     3961 aatatctaca agggtaaaat tacccgtgtc gaaccaagcc ttgaagctgc attcgtagat
     4021 tacggtgcag aacgccacgg cttcctacct ttaaaagaaa tttcccgaga atacttcccg
     4081 tcagactatg tgtttaacgg tcgcccgaat atcaaagata ttattcaaga agggcaagaa
     4141 gtgattgttc aagtcagcaa agaagagcgt ggtaacaaag gagcagcctt aaccaccttt
     4201 atttcgcttg cgggcagtta cttagtctta atgccgaaca accctcgtgc cggtggtatt
     4261 tcccgccgta ttgaaggtga tgagcgttta gaactcaaag aggctttaga ctgcttagat
     4321 gtaccggaag acgtgggctt aatcgttcgt accgccggtg tcggcaaatc gccggaagag
     4381 ttacaatggg acttaaaagt cttgttacac cactgggaag cgattaaaaa agcggcggaa
     4441 tctcgcccag ctccgttctt aattcaccaa gaaagtgacg tgattgtgcg tgcaattcgt
     4501 gactatctac gccgtgatat tggcgaaatc ttaatcgaca acaaaaaagt gttcgagaaa
     4561 gccaaaaacc acattcgcct tgttcgcccg gatttcatca accgtgtgaa attatacgaa
     4621 ggcgaagtac cactattcag ccactatcaa attgaatcgc aaatcgaatc ggcattccaa
     4681 cgtgaagtgc gtttaccttc cggtggctct atcgttattg atgtaacaga agccttaaca
     4741 gcaattgata ttaactcctc acgttcaacc cgtggcggcg atattgaaga aaccgctctt
     4801 aacaccaact tagaagcggc agatgaaatt gcccgtcagt tacgtttgcg tgacttaggt
     4861 ggtttgattg tgatcgactt tatcgatatg acaccggttc gccaccaacg tgaagtagaa
     4921 aaccgtattc gtgaggcgac acgccaagac cgtgcgagaa tccaatttgc ccgtatttcc
     4981 cgtttcggtt tgttagaaat gagccgtcag cgtttaagcc catcattaag tgaggcttca
     5041 tcgcatatct gccctcgctg tcagggaact ggtaaagtac gtgataatga atcaatcgca
     5101 ctgtcaatct tacgtttatt agaagaagag gcaatcaaag aaaacactgc acaggttcac
     5161 accattgtgc cggtgcaaat cgccagctac ttactcaacg aaaaacgtaa agcgatttcc
     5221 agcattgaaa aacgccacga tgtacaaatt gttgtagtac cgtctgaaag tatggaaacg
     5281 ccgcatttca gcgtatatcg cctgcgtgaa aatgaaatta ctccaacgtt aagctacgat
     5341 ttaaccaagc attacgaagc tcgtcatgaa gaagaacacc cacatcatca ccatcaagaa
     5401 gatgtgctgg ttacccgtaa cgagccggtg attacggtag agtcagtgtt acaaagctcg
     5461 gagctgaatc tccaaccttc gccaacacca accgaaccac caaaaccatc gctgttaagc
     5521 cgcttaattg cgaccattaa aggctggttt agtgaagaaa aagtggaaga aaaaccgaag
     5581 ccgaaagcac gcaatcagcg tgagcgtcgc caacgccgtg aacgcccgaa ccgtaatgct
     5641 aaagcggaaa atcaagagcg taaaactccg caagctcaaa ctactccagc ggaagaaaaa
     5701 ccgatgcgta gcgagaaaaa agcacgccga gcggtagtgg aagaagtttc cggtgtaacc
     5761 gagcaagaga gtcgtagcaa ctcccgtgag gttcaaactg aacgtcgcca acgccgtgat
     5821 ctacgtaaaa aagtgcgtat cgaaacacaa gaagtagaag tggaaaatct aacacctgct
     5881 gttgaggaaa cggtggcaaa acaagttgaa aatgtgcaaa aaaatcaaca aattcaaccg
     5941 cttgcaaccc aagaagtacc tgttgaaaca gctcctgagg tagaaacaac gaacgaagga
     6001 cgtgaaaata accgccaacg ccgtttacct cgccatttgc gtgtgggcaa tcagcgtcgt
     6061 cgtgaaaatc aacgcaatca ggttatttct cctatgcctc taacttcagc tgttgcttcg
     6121 cctgagcttg cgagcggtaa agtttgggtt caggttacct ctactgtcaa agtagaggaa
     6181 aaagcatcat tcttatctgt tgatcaaatg cttgaacagc aagaaaatca gcttgttgag
     6241 acagagaaaa aatcagaaga gaagaagctt catacagtta gtccgctagg tggctttgta
     6301 gcacaagcaa ctaaccgtga tttggttaag gagaagcaag aacagctttc caaaccgaaa
     6361 gaagaaaaag ttgcttctga agacgtaaaa ccagtagagg taaaagagca tattgctcca
     6421 tttggtagtg ttgttgctca gcattctgaa cgtgatttag ttaaagagaa aaatgagcga
     6481 gtcagtaaat tccaatcgca agcaacggtt gcaccagcga ttgtggaaga ggttactaac
     6541 ccgattgaag tgccaaaatc aacttacgaa agcgattatc gatttaacgg cagattaggt
     6601 acattctctc gtgttgagca tacccaagcc gctatgacca ttgcttctgc accaagtgac
     6661 aagcttgaag tagtcgaaat tagccaatgg caaaactcta aatactattt ctatggcaaa
     6721 gggtttggcg gatataccag cgcagtgagc caagtgcagt cagcgcctcg ttcaaccaat
     6781 ggttaagtac aattaattgg tttaaatgcc tattagttat aactaatagg cattttttta
     6841 tcaaagtatg aactttctat caatttttct gcctaagtaa acgcacttta ttacaaagtg
     6901 cgttattttt agtttattta aggaactcgg tatgaaaaaa tcatttttat cattattagt
     6961 gttaggtaca actatggcac ttgctgcttg tgatcaggca aaagaagccg cgcaatcaac
     7021 tacagacaaa gcggttgaag taaaagaagc tgtagctgaa aaagctgcag aagttaaatc
     7081 ggctactgaa gcgaaggttg aagagttgaa agcggcagca aatgatgcag ctcaagcaac
     7141 agcagataaa acagaagagg caaaaaaggc agtggcagag aaagccactg agttaaaaac
     7201 cacaactgaa gctaaagtgg aagaactaaa agcagcagca aatgatgcag ctcaagcaac
     7261 aacagataaa acagaagagg caaaaaaggc agtagcagag aaagctgctg agttaaaagc
     7321 cacaactgaa gctaaagtgg aagaactaaa agcagcagca agtgatgcga ctcaagcaac
     7381 agcagataaa gcagaagaag ctaaaaaggc agtagctgag aaggcagcag aagtgaaagt
     7441 tgagacagaa acaaaagttg aagaaatgaa aaaagcgatt gaaagcaaat agtgcttttt
     7501 agtttctctg tagctatcga aacacg
//
LOCUS       DANLXD010000111         7417 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.112, whole genome shotgun sequence.
ACCESSION   DANLXD010000111 DANLXD010000000
VERSION     DANLXD010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7417
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.112"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..2596
                     /gene="topA"
                     /locus_tag="PXD18_002151"
     CDS             <1..2596
                     /gene="topA"
                     /locus_tag="PXD18_002151"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HDL6302539.1"
                     /translation="LVIVESPAKAKKINQYLGSNYVVKSSVGHIRDLPKSGSDEKTEK
                     AKPISTKGLTAAEKAKIKAEKERVALVKRMGIDPYNGWKANYQILPDKEKVVSELKSL
                     AKKADHIYLATDLDREGEAIAWHLREIIGGDDSRFSRVVFNEITKDAIKKAFDDPQPL
                     NIDRVNSQQTRRFLDRVVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQ
                     SEEFWTILANTQINRKKLPLELTTYKGKKFSASNEAEANVAVRALEQSDFIVSNIEAK
                     ETSSRAAAPFITSSLQRAASTRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSREAL
                     AMARGYIQDNFGANYLPEKANVYRSKDNAQEAHEAIRPSDVNVKMADLKGMDKDAERL
                     YDLIWRRFLACQMLPARYDSTAVTVSAGDYELKANGRVLRFDGWTKVLPVQGKNPEDQ
                     ELPAVELHQKLTLDEIVPSQHFTKPPARFNEASLVAELEERKIGRPSTYASIISTIQE
                     RGYVRTENKRFYVEKIGEVVTDRLNESFKDLMNYDFTANMEEVLDQIAEGSKNWKEEL
                     NTFFKHFSEELSQAELDELEGGMKPNSLVPTDIDCPTCGRKMAIRTASTGVFLGCTGY
                     ALPPKERCKTTMNLIPEAEFFNVLDSDSETKALMARKRCPKCDSAMDSYVIDAERKLH
                     VCGNNPNCDGHIIEQGSFKIKGYDGPVVECDKCGSDMHLKLGRFGKYMGCTSCDNTRK
                     ILKNGEVAPPKEDPIAFPELKCEKADAYFVLRDGASGVFMSAHNFPKVRESRAPKVVE
                     LAQYRERLPEKLQYLADAPQQDPEGNEAIIRFSRKEKRQYVTSEKNGKATKWIVDYLD
                     GKWVERKK"
     gene            complement(2646..3584)
                     /gene="yvcK"
                     /locus_tag="PXD18_002152"
     CDS             complement(2646..3584)
                     /gene="yvcK"
                     /locus_tag="PXD18_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine diphosphate-N-acetylglucosamine-binding
                     protein YvcK"
                     /protein_id="HDL6302540.1"
                     /translation="MENTDIIPFKPTRHHYLNQLNAVVALGGGHGLGRLLSALSFLKE
                     RLTGIVATTDNGGSTGRIRSQQGVIAWGDLRNCLNQIIVKPTIASRLFEYRFAGTGEL
                     AGHNLGNLILTALENMQIRPLEGINLVRELLHVRSQLIPMSEIPVHLIAQLHSGESVF
                     GEVQIDSLAETPQHLALDTMVVATPEAISAIQSAELILLGPGSFFTSIMPNLLVAGIA
                     NSIAQSKARVVFIDNIGQEHGPAGQLSLNQRIEWMENCIGQARINAVITTDDAGSELP
                     EHIQILRKNLSANDVYYRHDRNKLSKAIDELLAQNI"
     gene            complement(3598..4674)
                     /locus_tag="PXD18_002153"
     CDS             complement(3598..4674)
                     /locus_tag="PXD18_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDL6302541.1"
                     /translation="MFQMLQDWYRKKFTDPQIVVLFSILLIGFGIIYFFSDLLMPLLV
                     ALVFAYLLEWPIRFLSSKLKLPRTLSVILVLGGFIALLSFLGVVLLPSLWNQAVTFIQ
                     DLPSMFNLLNAWLQALPEHYPELVDYATLDSIVNTAKSNILSMGESLLTLSINSIISL
                     VGLGIYTFLVPLMVFFLLKDKIVLMRSFSKVLPQNRRLATRVWFEMQQQIANYIRGKF
                     LEILIVGVVTYIIFLFFDLRYPLLLSVAVGISVLVPYIGAVLVSIPVMLIALFQFGLS
                     PDFYYLMLAFIISQLLDGNLLVPFLFSEAVNLHPLTIIIAVLIFGGLWGFWGVFFAIP
                     LATLVKAVLQALPSAQSDAIILEK"
     gene            complement(4705..5460)
                     /locus_tag="PXD18_002154"
     CDS             complement(4705..5460)
                     /locus_tag="PXD18_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL6302542.1"
                     /translation="MKKEEVGHHFLARLGKTRLRPGGKLATDWLIANGDFDKNKKVLE
                     VACNMGTTAIQLAQQFECQIVGIDLDEDALEKARKNIKENHVEHLIQVQRANATKLPF
                     DDESFDIVINEAMLTMLPLEAKEKAIREYFRVLKPNGFLLTHDIVIQDKDSDTLLAEL
                     RDAINITVSPLAKADWKSLFQRCGFRNVDTFSGEMSLLSPKGLIHDEGVLGAMKIIGN
                     ALKPENRETFNKMYKLFNDPDKKLGFIAVCSQK"
     gene            5612..5821
                     /locus_tag="PXD18_002155"
     CDS             5612..5821
                     /locus_tag="PXD18_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome alternative rescue factor ArfA"
                     /protein_id="HDL6302543.1"
                     /translation="MSKQKNDYLHQRGQIKESAVKALVTDPLFRQRVERNRKGKGSYR
                     RQEKHKKTIYGQKETPFKNIRLESF"
     gene            complement(5870..6592)
                     /gene="bioD"
                     /locus_tag="PXD18_002156"
     CDS             complement(5870..6592)
                     /gene="bioD"
                     /locus_tag="PXD18_002156"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDL6302544.1"
                     /translation="MPSLFITGTDTNVGKTVVTRAIIQTLTKHSFPVIGYKPIACGGD
                     DSLPTEPTQYDYATEDNSDVLTILDSCPTNVSYRDINSYTFIHSSTPVFAALDAVHHI
                     QLEKLNTDLKRLENAYPNVVVEGTYGWLTPINKDYYFADWVMQNNMPVVLVVGIKEGC
                     VNHALLTANEILQRGVKLVSWVANRVNPGLRHYHELIELLTQKINAPLLGQIPYMGHP
                     EHKELSSYIQNPEPLLAYFSKP"
     gene            complement(6640..>7417)
                     /locus_tag="PXD18_002157"
     CDS             complement(6640..>7417)
                     /locus_tag="PXD18_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HDL6302545.1"
                     /translation="LLAVSISVIGKINAEKDSITQLGNKNIFCNITSKLSPLFHCPIL
                     LSEHFQLWLLAESTVGSLINQDNAIFLQLDDTVNLSVLLSGSLLSKQSKMNVDNMLMP
                     RFSHLSDEIFPELDEIHRYKLVNQVTFPAIVRLIDRYLPNNLKSQEQKISWLCQKIDE
                     NQPLALAILSHITDNLAYALMNLVNIFSSEKIMLNSPLIKIKEPLFTQISEKLHKNLL
                     QTNLKIDLVTSQYDWNSPLIACSAIKQGIYDGNLIKDRIN"
BASE COUNT         2359 a         1361 c         1537 g         2160 t
ORIGIN      
        1 actagttatt gtggagtctc cggctaaggc aaaaaaaatt aaccaatatc ttggtagtaa
       61 ttatgtggtg aaatcgagtg tggggcatat tcgtgattta ccgaaaagtg gtagtgatga
      121 aaaaacggaa aaagcgaaac cgatttcaac caaagggctg accgctgccg aaaaagctaa
      181 aatcaaagca gaaaaagagc gtgttgcatt ggttaaacgt atgggtatcg acccctataa
      241 tggctggaaa gctaactatc agattttgcc ggataaagag aaagtggttt ccgagctaaa
      301 atcgttggca aagaaagcag atcatatcta tctggcaacc gacttggata gagaagggga
      361 ggcgattgcg tggcatttgc gtgaaatcat tggtggtgat gacagccgtt ttagccgagt
      421 ggtatttaat gaaatcacca aagatgcgat caaaaaggct tttgacgatc cgcaaccgct
      481 caatattgac cgtgtaaatt cccagcaaac ccgccgcttt ttagaccgtg tagtgggctt
      541 tatggtgtcg ccattattat ggaaaaaagt agctcgtggt ttatcggcag ggcgtgtgca
      601 atcggttgcc gtaaaattac tggttgagcg tgagcgtgaa atcaaggcgt tccaaagcga
      661 ggagttttgg actattcttg ccaatacgca aattaatcgt aaaaaattac cgcttgaatt
      721 aactacttat aaaggtaaaa aattctcggc aagcaatgag gctgaagcaa atgttgcagt
      781 gcgtgctttg gagcagagcg attttattgt ttctaatatt gaagccaaag aaaccagctc
      841 tcgagctgct gcaccattta ttacctcatc gttacaacgt gccgctagca ctcgtttagg
      901 ttttggggtt aaaaagacga tgatgttagc ccaacggtta tatgaagcgg gttacatcac
      961 ctatatgcgt actgattcaa ccaaccttag ccgtgaagca ttagcaatgg ctcgaggtta
     1021 tattcaggat aatttcgggg cgaattattt gccggaaaaa gcaaatgtgt atcgcagtaa
     1081 agataatgcc caagaagctc acgaagccat tcgcccgtcg gatgtgaatg tcaaaatggc
     1141 ggatttaaaa ggaatggata aagatgccga gcgtttatac gatttaattt ggcgtcgttt
     1201 cttggcgtgt caaatgttgc ctgctcgtta tgattctacc gcagtcacag tgtctgccgg
     1261 agactatgaa ctcaaagcaa acgggcgtgt actgcgtttt gacggctgga cgaaagtact
     1321 gccggtgcaa ggcaaaaatc cggaagatca ggaattaccg gcggttgaac tgcatcaaaa
     1381 attaacgctt gatgaaattg tgccaagtca gcattttact aaaccgcctg cacgttttaa
     1441 tgaggcgtct ttggttgctg agttagaaga gcgaaaaatt ggccgccctt caacctatgc
     1501 ttcaattatt tcgacgattc aagaacgtgg ctatgttcgc accgaaaaca agcgttttta
     1561 tgtggaaaaa atcggtgaag tagtgacgga tcgcctcaac gaatcattca aagatttaat
     1621 gaattatgat ttcactgcca atatggaaga ggtgctcgac caaattgcag aggggtctaa
     1681 aaattggaaa gaagagttga atactttctt taaacatttc tctgaagagt tgagccaagc
     1741 agaattagat gaacttgaag gcggaatgaa accaaacagc cttgtgccaa ccgatattga
     1801 ttgcccgact tgtggacgaa aaatggcaat tcgcaccgct tccacagggg tatttttagg
     1861 ttgcaccggc tatgctttac cgccaaaaga gcgttgcaaa acgacaatga atttaattcc
     1921 agaggcggaa tttttcaatg tgttagattc ggattctgaa accaaagccc taatggctcg
     1981 caagcgttgc ccgaaatgcg attcggcaat ggatagttat gtgattgatg ctgaacgtaa
     2041 attacacgtt tgtggtaata atccaaattg tgatggtcat attattgagc aaggttcctt
     2101 caaaattaaa ggctatgacg gacctgtagt ggaatgcgat aaatgcggtt cagatatgca
     2161 cttaaaactg ggtcgtttcg gcaaatatat gggctgcaca agctgcgata acacccgtaa
     2221 aattctgaaa aacggggaag ttgctccgcc aaaagaagat cctattgctt ttcctgaatt
     2281 aaaatgtgaa aaagccgatg cctattttgt attaagagac ggagcaagtg gggtgtttat
     2341 gtcagctcat aacttcccga aagtgcgtga aagccgtgca ccaaaagtgg tagagttagc
     2401 tcaatatcgt gaacgtttgc cggagaaatt gcagtatctt gccgatgctc cgcagcaaga
     2461 tccggaagga aacgaggcaa ttatccgttt tagtcgtaaa gagaaacgcc aatatgtgac
     2521 ttctgagaaa aacggcaaag ccaccaaatg gattgttgat tatctagacg gtaaatgggt
     2581 tgagcgtaag aaataaagct taaaagacaa gcggtaaaat tttctaaaaa ttttaccgct
     2641 tgcttttaga tgttctgagc gagtagttca tcaattgctt tacttaattt attgcgatcg
     2701 tgtcggtaat aaacgtcatt cgcagataag ttttttcgca agatttgaat atgttcggga
     2761 agttcagaac cggcatcatc agtcgtaatt accgcattaa ttctagcctg tccgatacag
     2821 ttctccatcc attcaattcg ctgattaagt gatagttgcc cagctgggcc atgttcttgt
     2881 ccgatattgt caataaatac tactcgggct ttgctttgag caatagagtt tgctatgcct
     2941 gccaccagca aattcggcat aatactggta aaaaagctac ctgggcctag cagtattaac
     3001 tcagcacttt gaatagctga aatggcttct ggtgtagcaa caaccatagt atctaacgct
     3061 aaatgttgtg gtgtttctgc taaagaatca atttgcactt caccaaatac tgattcgcct
     3121 gaatgcaact gtgcaattaa atgcaccggt atttcagaca ttgggataag ttgcgatctt
     3181 acgtgcaata attctcgcac caaattaatc ccttctagcg gtcggatttg catattttca
     3241 agggcggtga gaattaaatt gcctagatta tgtccagcga gttcgcctgt gccagcaaaa
     3301 cgatactcaa acaaccgaga agctatcgtt ggtttaacga taatttgatt taaacagttg
     3361 cgtaaatctc cccaagcaat caccccttgt tgtgaacgta ttctaccggt tgagcctcca
     3421 ttatcggtag tggcaacaat gccggtaagc cgttccttta aaaaagagag cgcggagagc
     3481 aatcgaccta agccgtggcc cccacctagt gcaacaactg cattgagttg gtttaaatag
     3541 tgatgtcggg taggtttaaa aggaataata tctgtatttt ccatcttggg atttcgttta
     3601 tttttctaaa ataatggcat ctgactgggc tgaaggcaat gcttgtaata cagctttaac
     3661 caaagtcgct aaaggaatcg caaaaaacac tccccaaaag ccccataaac caccaaagat
     3721 gagtacggca ataataattg tcagagggtg tagatttact gcttcagaaa ataaaaaggg
     3781 tacgagtaaa tttccgtcta gcaactgact aataataaat gcgagcatta aatagtagaa
     3841 atccggcgat aacccgaact ggaatagagc aattaacatt accggaatgc tgactaaaac
     3901 cgcaccgatg tagggaacta acactgaaat ccctaccgct acagaaagta gtaacggata
     3961 gcgtaaatca aaaaagagga aaataatata agtgacaacc ccaacaatta gaatttctaa
     4021 aaatttacct cgaatatagt tggcaatttg ttgttgcatt tcaaaccata ctcgtgttgc
     4081 aagtcgacgg ttttgcggta atactttact aaaagaacgc attaaaacga ttttatcttt
     4141 cagtaagaaa aagaccatga gtgggactaa gaaggtgtaa atgcctaagc caactaagct
     4201 gatgatagag ttaatcgaga gtgttagaag tgattctccc atactcaaaa tattactttt
     4261 agcggtattc acaatggaat ctagggtcgc ataatctact aattcagggt aatgctccgg
     4321 tagggcttgt aaccaagcat tgagcagatt aaacatcgaa ggtaaatctt gaataaaggt
     4381 aactgcttga ttccaaaggc tgggtagtag tactacgcct aaaaaagata ataaagcgat
     4441 gaaacctcct agtactagaa tgacactcaa agttcgaggt aatttgagtt tgctcgacaa
     4501 aaaacggatt ggccattcca ataaataggc aaacacaagt gcaaccagaa ggggcataag
     4561 cagatcgcta aaaaaataga taataccgaa accgatcaat agaatactaa acagcacaac
     4621 tatttgcggg tcggtaaatt tttttcgata ccaatcttgc aacatttgaa acatatggat
     4681 tgcctttaaa ttatgcgatg aaaattattt ctggctacag actgcaatga accctagctt
     4741 tttgtccggg tcattaaata gtttgtacat tttattaaag gtttcgcgat tttctggttt
     4801 taatgcattg ccgataattt tcatggcgcc taaaacacct tcatcatgaa tcagaccttt
     4861 aggggaaagt agagacattt ctccggaaaa ggtatcaaca ttacggaaac cacaacgttg
     4921 gaataatgat ttccagtctg ctttagcaag tggagagaca gtgatattga ttgcatcacg
     4981 caactcggct aataaagtat cggagtcttt atcttggata acaatatcgt gcgttaataa
     5041 aaagccattt ggttttaata cacgaaaata ttcacgtatt gccttttctt tcgcttctag
     5101 aggaagcatt gtcagcatgg cttcattaat tacaatatca aaactttcgt cgtcaaatgg
     5161 cagttttgtt gcgttggcgc gctgtacttg aattaaatgc tcaacatggt tttctttgat
     5221 atttttacgt gctttttcaa gcgcatcttc gtctaaatca ataccaacaa tttggcattc
     5281 aaattgttga gctaattgga ttgcagtagt ccccatgtta caggcaactt cgagcacttt
     5341 tttattttta tcaaaatccc cgtttgcaat taaccaatca gttgctaatt tccccccggg
     5401 gcgtaaacga gttttgccta aacgagctaa aaaatgatga ccaacttctt cttttttcat
     5461 aaaaacctct ggatttgcaa aatacgttaa atatatgacc gcttgtattg tgatctatgt
     5521 tcgttattat actcaatttt ttcattttct tatatacaac atcaacagat tttgccagaa
     5581 tacaacctca ttttgatatg aggaaaatag aatgagtaag caaaagaatg attacctcca
     5641 ccagcgaggt caaattaaag aaagtgcagt aaaagcatta gtgactgatc cactttttag
     5701 acaacgtgta gaaagaaatc gtaaagggaa agggagctat cgcagacaag aaaaacacaa
     5761 aaaaactatc tatgggcaaa aagaaacccc atttaaaaat attcggttag agtcttttta
     5821 aatggggttt tatttgtagc ttattgtagt tttataagcc tgataaacac tatggtttac
     5881 tgaaataggc caacaacggt tctggatttt gaatataaga agaaagttct ttatgctctg
     5941 ggtgacccat atagggaatt tgcccaagta aaggcgcatt aattttttgt gtcagtagtt
     6001 caattaattc gtgataatgc cgtagccctg gatttactct gtttgcgacc caacttacta
     6061 attttacacc acgctgcaaa atttcattcg cagtaagtag tgcatggtta acacaacctt
     6121 ccttaattcc caccactaaa acaaccggca tattgttttg cattacccaa tcagcaaaat
     6181 agtaatcctt gttaatagga gttagccagc cataggttcc ttctacgaca acatttggat
     6241 aggcattttc tagtcgtttt aaatctgtgt ttaatttttc cagttgaata tgatgaactg
     6301 catctaaagc tgcaaataca ggggtactgg aatgaataaa agtatagcta ttaatatcac
     6361 gatagctaac attagttgga cagctatcta gtatggttaa tacgtctgaa ttatcttcag
     6421 tagcataatc atattgagta ggttctgtgg gtaatgaatc atcaccgcca caagcaatgg
     6481 gtttatagcc aattacagga aaactatgtt ttgtaagtgt ctgtatgatg gctcgggtaa
     6541 ccacagtttt ccctacgttg gtgtctgttc cggtaataaa taatgagggc ataaatggct
     6601 cctttcgaaa atatggctgg tagtttaacc aaaaatagat caatttattc tgtctttgat
     6661 caaatttccg tcataaattc cttgttttat tgctgaacag gcaattaatg gactattcca
     6721 atcgtattgg ctggtaacta aatcgatttt taggtttgtt tgtaacaaat ttttatgcaa
     6781 tttttctgaa atttgcgtaa ataacggctc ttttattttg atcaatggcg agtttagcat
     6841 aattttttca ctagaaaata tattaactaa attcattaat gcataagcta aattatcggt
     6901 aatatgcgat aaaatagcta atgcaagcgg ttgattttca tcaatttttt gacaaagcca
     6961 gctgattttc tgttcctgac tttttaaatt attaggcaaa taacgatcaa tgagtctcac
     7021 aatagctggg aacgtcacct gattgactaa tttatagcga tgaatttcat ctagttcagg
     7081 gaatatttca tcactgagat ggctaaatct aggcataagc atattatcaa cattcatctt
     7141 tgattgttta gacagtaaac taccactaag caatacactt agattcacag tatcatctaa
     7201 ttgtagaaaa atagcattat cttggttaat taatgagcca accgtagatt ctgcaagcaa
     7261 ccacagctga aaatgttcac ttaataaaat aggacaatga aacagcggcg agagtttaga
     7321 tgtaatgtta cagaatatat ttttgtttcc caattgagta atactgtctt tttctgcatt
     7381 aattttaccg atcacactaa tagatacagc caggagc
//
LOCUS       DANLXD010000112         7206 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.113, whole genome shotgun sequence.
ACCESSION   DANLXD010000112 DANLXD010000000
VERSION     DANLXD010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7206)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7206)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7206
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.113"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            105..1010
                     /locus_tag="PXD18_002158"
     CDS             105..1010
                     /locus_tag="PXD18_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDL6302546.1"
                     /translation="MSQKYSVAVIGLGAMGMGAAKSCIAAGLDTYGVDLNPNYLETLK
                     AAGAKKVGTSAVDFAAELDAVLLLVVNANQVNAVLFGENGLAQHLKQGTVVMVSSTIS
                     AQDAKNISQKLTDLGLVMLDAPVSGGAAKAAQGEMTVMASGSSEAFEKLKPVLDAVAG
                     KVYNIGEEVGLGATVKIIHQLLAGVHIAAGAEAMALAARAGIPLDLMYDVVTNAAGNS
                     WMFENRMKHVVEGDYTPLSMVDIFVKDLGLVNDTAKSLRFPLHLASTAYSMFTEASNA
                     GYGKEDDSAVIKIFSGIELPKKEGK"
     gene            1012..2253
                     /locus_tag="PXD18_002159"
     CDS             1012..2253
                     /locus_tag="PXD18_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005754893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
                     /protein_id="HDL6302547.1"
                     /translation="MLGIIADDFTGASDIASFLTENGLKTVQMNGVPKTTLNSQVDAI
                     VISLKSRSNPVEEAIQQSLQALDWLKQNGCSQFYFKYCSTFDSTEKGNIGPVTDALMA
                     ALDTDFTVVTPALPVNGRTIFNGYLFVGDVLLNESGMRNHPITPMKDANLVRLMDAQS
                     QGKTGLVAYADVIQGAERVKARFAELKQQGYKYAVVDAADNSQLAVLAEAVADFQLVT
                     GGSGLGAYMAAYRSGGKKGTNAFVPSKGKTVVLSGSCSVMTNTQVAAYQQKAPSYFLE
                     AEKAIQDPNYVETLYQWVIANLDGDFAPMVYATVPPEKLKEIQTQFGGDKASHAIENT
                     FAKLAEKLQAAGVTNFITAGGETSSIVVQQLGFSGFHIGKQIAPGVPWLQAVEKPIFL
                     ALKSGNFGKEDFFSFAQEMFV"
     gene            2250..2882
                     /locus_tag="PXD18_002160"
     CDS             2250..2882
                     /locus_tag="PXD18_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014668373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HDL6302548.1"
                     /translation="MTEQEQKIEMVNLARSLFERGYTVGGAGNLSVRLDENRILVTPT
                     GSSLGRLEADRLSVLDMQGNVLSGDKPSKESVFHLAMYQKNPACQAIVHLHSTYLTAL
                     SCLENLDTDNAMRAFTPYYVMRVGKLPVIPYYRPGDINIARELGERALDGKAFLLANH
                     GVVVTGSDLRDAVDNTEELEETSKLYFILQGQKVRYLTDDEVNDLKNRGK"
     gene            2884..3660
                     /locus_tag="PXD18_002161"
     CDS             2884..3660
                     /locus_tag="PXD18_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005547735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxypyruvate isomerase family protein"
                     /protein_id="HDL6302549.1"
                     /translation="MPKFAANLTMMFNEVPFLDRFEAAANAGFKYVEYLWPYDYPAAE
                     LKAKLEQYGLKQVLFNTAAGDVAQGEWGVSAIPGREADSHRDIDLALEYALALGCENV
                     HVMAAVVPEGEDREAYKQTFIKNVQYAADKFKPHGINVLLEALSPEVKPNYLLKSQFD
                     TLEIVEAVNRDNVFVQLDYFHAQNVDGNLSRLTDKLKGKFAHIQIAPVPDRHEPDEGE
                     INYQYIFNKLDEIGYEGYVGCEYKPRAETTSGLGWFEQYK"
     gene            3713..5071
                     /locus_tag="PXD18_002162"
     CDS             3713..5071
                     /locus_tag="PXD18_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntT protein"
                     /protein_id="HDL6302550.1"
                     /translation="MSNEMLILIGLASVVALLVIMIKGKVHPFLALGLVSIAVALTAG
                     IPMSKVIPTLISGMGSTLGSVALIVGLGAMLGKIIEKSHGADVLANWLLQRFGEKNAP
                     FALGMTGFIFGIPVFVDVGFIVLLPIIFSVARRLGGNILVYSLPIGLAMLLVHVLVPP
                     HPGIVAGAQNLNADIGFVLGIGLVAALPAYLIGQKFIPFFTKNNFVKVVTSTDLLQHQ
                     KDLIKEKGIELPSFGKVLAMISFPLILIMLGTVTATTLPKEHIVREVFSMVGSSPFAL
                     FVAVCLSAYVLGFRYGWTKHKLEEVLESALAPIAGIILITGAGGMFGKVLDASGVGKA
                     LADVLANTGLPLLVLSFILSALLRAAQGSATVATITTTTILAPAAVAAGYNDLQLALL
                     TAAIGAGSMTLSHVNDSLFWVWTKFFNVPVSVGLRTWTFLTTIFGVIAFAVVGIIWML
                     FV"
     gene            5133..6473
                     /locus_tag="PXD18_002163"
     CDS             5133..6473
                     /locus_tag="PXD18_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase"
                     /protein_id="HDL6302551.1"
                     /translation="MLKKTLLFTLLLSHSLYAEDMIQENKSANITLLAEITAQGQKIN
                     GVALEYPDNVLSGSDLRQLYQVKTALDSAEKENRSVLKAYVNNEPKVTALPQAGKFVI
                     IELDTADKNAATYSVKDANKAPMKFKSKDENGNIVETEKVQAVKIPEFFANRLIYSAE
                     QKGLLKLTSGTTLGKTEWTQTAEPDKIKTPYLDDFVAKQVSLDQSGNKLNYRLYSPLQ
                     KNGEKYPLVIFLHGSGQVGSDNLAHLLSSKGAIATLPYAPSFVLAPQYDQVFDPFDNA
                     AKGQKGGIHWQTENRINLVLKMIDETLKANPQIDTTRIYINGLSRGAEGGLNLLLARP
                     NFFAGALLMSGREAYTNEWVDGNATKTNLAAIKHIPIWFFHSKEDKVSPVKGSRINYR
                     ILKDELNAPNVKYTEFTFEQAGDNGIVNNNPHNTWDAVYNSPEVIGWLLQQKRH"
     gene            6485..7174
                     /locus_tag="PXD18_002164"
     CDS             6485..7174
                     /locus_tag="PXD18_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005577085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HDL6302552.1"
                     /translation="MFMYLSHPLDPKDLAWPGEPVVEVTRCTDVGEETPFSSFITKLP
                     NHCGTHMDAPRHFVKDGLSINELPIEYFCHKEVALIEIPKGEAEGITKEDLLPYVDIL
                     SKVSFAFLRTGFEKYRTENPAIYQNECPYISTGAGQYLSDTFPNLKGVGIDFLALGSP
                     SSRVPDAENPKNCHRAILGYYTGRFTTVIEDMHLAELPKNANIKQFFNAPWRIKGLDS
                     SQVTCIVELQQ"
BASE COUNT         2071 a         1468 c         1660 g         2007 t
ORIGIN      
        1 ttcacattta ttgttaatat ttgtgatctt catcacagat tttatctttt ctattggtta
       61 atataccgcc atcaagttca ttaatttatt tgagggaata aacaatgagt caaaaatata
      121 gcgtagccgt catcggctta ggagcaatgg gtatgggagc agcaaaatct tgtatcgctg
      181 ccggattaga cacatacggt gtggatctta acccgaatta tctggaaacc ttaaaagcag
      241 caggtgctaa gaaagtcggc acaagtgcgg tcgattttgc cgctgaatta gatgcggtgt
      301 tgttgttggt ggttaatgcc aaccaagtga atgcggtgtt attcggtgaa aacggcttag
      361 cccaacattt gaaacaaggt acggtggtga tggtatcttc caccatttct gcacaagatg
      421 caaaaaatat ttcacagaag ttaacagatt taggcttggt gatgttagat gctccggttt
      481 cgggtggggc agcaaaagca gcacaaggtg aaatgactgt gatggcatca ggttccagcg
      541 aggcattcga gaaattaaaa ccggtattag atgcggttgc aggcaaagtg tataacattg
      601 gcgaagaagt cggcttgggt gcaacggtaa aaattatcca tcaattactt gccggtgtgc
      661 atattgccgc aggtgcagaa gcaatggcat tggcggctcg tgccggtatt ccgcttgatt
      721 taatgtatga cgttgtaacc aatgcggcag gcaattcttg gatgtttgaa aaccgaatga
      781 aacacgttgt tgagggcgat tacaccccac tctctatggt ggatattttt gtgaaagatt
      841 tgggattggt gaacgacacc gcaaaatctt tgcgtttccc gcttcactta gccagcaccg
      901 cttattctat gtttaccgaa gccagcaacg caggttacgg caaggaagat gatagtgcgg
      961 tcattaaaat tttcagtggt atcgaattac ctaaaaaaga ggggaaataa gatgttaggc
     1021 attattgcag acgatttcac cggtgcgagt gacatcgcca gtttcttaac cgaaaacggg
     1081 ctaaaaacgg tgcaaatgaa tggtgtgccg aaaactacac ttaacagtca agttgatgcg
     1141 attgtgatta gcctgaaatc tcgctctaac cctgtggaag aagcaatcca acaatcatta
     1201 caagccttag attggctgaa acaaaatggt tgctcgcaat tctactttaa atattgttcc
     1261 acttttgaca gcacggagaa aggcaatatc gggccggtaa ccgatgccct aatggcggca
     1321 ttagataccg attttaccgt agtcacaccg gctctgcctg tcaatggcag aaccattttc
     1381 aacggctatt tgtttgtggg cgatgtgcta ctgaatgaat ctggtatgcg taaccacccg
     1441 attaccccga tgaaagatgc caacttggtg cgtttaatgg atgcacaatc tcaaggcaaa
     1501 accggcttgg ttgcctatgc tgatgtgatt caaggggcag agcgtgtgaa agcccgtttt
     1561 gctgaattga aacagcaagg ctacaaatat gcggtagtag atgctgccga taattcacaa
     1621 cttgcggtgc ttgccgaagc ggttgccgat tttcaattag tcacaggcgg ttcaggctta
     1681 ggggcttata tggcggctta ccgttcaggc ggcaaaaaag gcacgaatgc gtttgtacca
     1741 agcaaaggca aaaccgttgt gctttcgggt tcttgctcgg taatgaccaa tacccaagtg
     1801 gcggcttacc agcaaaaagc cccaagttat ttcttagaag cggaaaaagc cattcaggat
     1861 ccgaactatg tagaaacgct ttatcaatgg gtgattgcaa acctagacgg tgactttgcc
     1921 ccaatggttt atgccaccgt tccccctgaa aaattgaaag agattcaaac ccaattcggc
     1981 ggcgataaag ccagccacgc cattgaaaat acctttgcca aattagccga aaaattacaa
     2041 gccgcaggcg taactaactt tattaccgca ggcggtgaaa cttcgagcat tgtggttcag
     2101 caacttggat tcagcggttt ccacatcggc aaacaaattg caccgggcgt gccgtggtta
     2161 caagcggtcg aaaaaccgat ttttcttgca ttgaaatcgg gtaacttcgg taaagaagat
     2221 ttcttcagtt ttgctcagga gatgtttgta tgacagaaca agaacaaaag attgaaatgg
     2281 tcaatcttgc ccgctcgctg tttgagcggg gctataccgt tggcggtgcg ggcaacctct
     2341 ccgtgcgttt agatgaaaat cgcattttag ttaccccaac cggctcttcg ctcgggcgtt
     2401 tagaggcaga ccgcctttcc gtattggata tgcagggtaa tgttctttca ggagataaac
     2461 cttcaaaaga atcggtattc cacttggcga tgtatcagaa aaatccggct tgccaagcaa
     2521 tagtgcatct gcattccact tatttaaccg cactttcttg cttggaaaat ttggataccg
     2581 acaacgctat gcgtgctttc accccttact atgtgatgcg ggtaggaaaa ttgccggtca
     2641 ttccttacta ccgtccgggc gacatcaaca ttgcccgaga gctgggggaa cgagccttag
     2701 acggcaaagc ctttttactg gcaaatcacg gggtggtagt cacaggttca gacttgcgtg
     2761 atgcggtgga taacacagaa gagttggaag aaacctccaa gctctatttt attctacaag
     2821 gtcaaaaagt ccgttatctc accgatgacg aagtcaatga tctgaaaaac agaggaaaat
     2881 aaaatgccta aatttgcagc aaaccttacg atgatgttta acgaagtgcc gtttttagat
     2941 cgttttgaag cggctgccaa cgctggattt aaatatgtcg agtatttatg gccttatgat
     3001 tatccggcag cagaattgaa agccaaactt gagcaatatg gcttaaaaca ggtgttgttc
     3061 aataccgcag ccggagatgt tgctcaaggt gaatggggtg tttctgccat tccggggcgt
     3121 gaagctgata gccatcgtga tattgattta gcgttggaat atgccctcgc cttaggttgt
     3181 gagaatgttc acgttatggc agcggtcgtg ccagaaggcg aagatcgtga agcctataaa
     3241 caaaccttta tcaaaaacgt gcaatatgcc gccgataaat tcaaaccgca cggcattaac
     3301 gtcttgcttg aagccctaag ccctgaagtg aaaccgaatt atctgcttaa aagccagttt
     3361 gatacgctag aaattgtgga agcggtaaac cgagacaatg tgtttgtaca gcttgactac
     3421 ttccacgcac agaatgtgga cggcaactta tctcgcctaa ccgacaaact caagggtaaa
     3481 tttgcccaca ttcaaattgc ccctgtgcca gatcgccacg aaccggacga aggggaaatt
     3541 aactaccaat atatcttcaa caaactcgat gaaatcgggt atgaaggcta tgtaggttgc
     3601 gagtataaac cacgagcgga aaccacctca ggactaggtt ggtttgagca gtataaataa
     3661 ccacgatgat tagcggataa atacgtgaat acaacattta gaaggaaact ttatgtcaaa
     3721 tgaaatgtta attttgattg gattagcaag cgtagttgct cttctggtca ttatgattaa
     3781 aggtaaagta cacccattct tagcattggg gttagtgagt atcgcagttg ccttaactgc
     3841 aggtattcca atgagtaaag tgatcccaac cttgatttca ggtatgggaa gtactttagg
     3901 tagcgttgca ctcatagtag gtttgggagc aatgttaggg aaaatcattg aaaaatctca
     3961 cggtgcggat gtattagcaa attggttgtt acagcgtttt ggtgagaaaa acgctccctt
     4021 tgcattaggt atgacaggtt ttatattcgg tattcctgtt ttcgttgatg ttggttttat
     4081 cgtattgctc ccgattattt ttagtgtagc gagacgttta gggggaaata tccttgttta
     4141 ttctttgcca atcgggcttg cgatgttact tgttcacgtt ttagttccac ctcatccagg
     4201 tattgtagcg ggtgctcaaa acttaaacgc agatattggc tttgtattgg gaattggctt
     4261 agtagcagcg ctacctgcat atttaatcgg tcaaaaattt attccgttct ttacaaaaaa
     4321 taatttcgta aaagtagtaa cttcaaccga tcttttacag caccaaaaag atttgattaa
     4381 agagaaaggc attgaactac cttcttttgg taaagtgtta gcaatgattt ctttcccgct
     4441 aatcctgatt atgttaggta cagtaacggc aacaaccttg ccgaaagaac atatcgtgcg
     4501 tgaagtattc agtatggtag gaagctctcc gtttgcctta tttgtggctg tttgtctttc
     4561 tgcttatgta ttaggtttta gatacggttg gactaagcat aaattagaag aagtactgga
     4621 gtctgcgtta gcaccgattg cggggattat tttaatcacc ggtgcaggcg gtatgttcgg
     4681 taaagtgtta gatgccagtg gcgtaggtaa agcattagca gatgtattag ccaacacggg
     4741 cttaccgtta ttggttcttt ctttcatact ttctgcatta ttgcgtgcag cacaaggttc
     4801 tgcaacggtg gcaactatta ctactacaac tattctagct cctgcagctg tagcagcagg
     4861 ttataatgat ctgcaattag cacttcttac tgcagctatt ggtgcaggtt ctatgacatt
     4921 atcccacgtg aatgattcac tcttctgggt atggacgaaa ttcttcaatg ttcctgtatc
     4981 cgtaggctta agaacttgga cgtttttaac gactattttc ggtgtaatag cctttgccgt
     5041 tgttggcatt atttggatgt tattcgttta atatcactct gttactgctt aaaatccacc
     5101 tcttatgagg tggatttttt taggagaaac ctatgctgaa aaaaacactt ttatttacgc
     5161 tattactttc tcactccctc tatgcagagg atatgattca ggaaaataaa tcagcgaata
     5221 ttacgttgct tgccgaaatc accgctcaag gtcaaaaaat taacggcgtg gcattggaat
     5281 atcctgataa tgtcttatca ggcagcgatc ttcgccaact gtatcaggtc aaaacggcat
     5341 tagatagtgc ggagaaagaa aaccgttcgg tgctcaaagc ctatgtcaat aatgagccaa
     5401 aagtgaccgc acttccgcaa gccggtaaat ttgtgattat tgaattggat acggcagata
     5461 aaaatgcggc aacttatagc gtaaaagatg ctaataaagc gccgatgaaa tttaaatcca
     5521 aagatgaaaa cggcaacatt gtagaaacag agaaagtaca agcggtcaaa attccagagt
     5581 tttttgcaaa tcgcctaatc tattcggcgg aacaaaaagg cttgcttaaa ttaaccagcg
     5641 gcacaactct aggcaagact gaatggacac aaaccgctga acccgacaaa atcaaaaccc
     5701 cttatctcga tgattttgtc gcaaaacaag tgagcttaga ccagtctgga aataaactga
     5761 actaccgtct ctattcgcct ttgcaaaaaa atggtgaaaa atacccgctt gtgattttcc
     5821 tacacggttc agggcaagtc ggttcggata accttgctca cctgctttcc agtaaagggg
     5881 cgattgccac cctgccttat gccccaagtt ttgtacttgc tccgcaatac gaccaagtat
     5941 tcgacccatt tgataatgcc gccaaagggc aaaaaggcgg tattcactgg caaacggaaa
     6001 atcgtatcaa tctcgtgtta aaaatgattg atgaaaccct aaaagccaat cctcaaattg
     6061 ataccacacg catttatatc aatggcttat ctcgaggtgc tgaagggggc ttaaatctgt
     6121 tgttggctcg cccgaatttc tttgccggag cattattaat gagcggtcgt gaagcctaca
     6181 ccaacgaatg ggtggacggc aatgccacca aaacgaattt ggcggcaatt aaacatatac
     6241 cgatttggtt tttccatagt aaagaggaca aagtctcgcc ggtaaaaggt tctcgcatta
     6301 actaccgcat tctcaaagat gagttaaatg cccccaatgt gaaatatacc gaattcactt
     6361 ttgaacaagc cggcgacaac ggcattgtca ataataaccc tcataatact tgggacgctg
     6421 tgtataacag ccctgaggtg attgggtggt tacttcagca aaaacgccac taaggaggct
     6481 cactgtgttt atgtatttgt ctcacccgtt agatcctaaa gatttagctt ggccgggaga
     6541 acctgttgtt gaggtgactc gctgcacaga cgtaggtgaa gaaacgccat ttagcagttt
     6601 tatcacgaaa ctaccgaatc attgcggcac acatatggac gctcctcgcc actttgtgaa
     6661 agacggttta agtatcaatg aattgccgat agagtatttc tgccataaag aggtcgcttt
     6721 aattgaaatt cccaaaggag aggcagaagg gatcaccaaa gaagatttat tgccttatgt
     6781 cgatattctc tccaaggtgt cttttgcctt tttacgaacg gggtttgaga aatatagaac
     6841 cgagaaccct gctatttatc aaaatgaatg cccctatatt tcaaccggtg ccgggcagta
     6901 tttatctgat actttcccga atttgaaagg agtaggcatt gatttcttgg cactagggtc
     6961 tccttcttcc cgagtgcctg atgcggaaaa ccctaaaaat tgccatcgag cgattttagg
     7021 ctactatacc ggcaggttta ccactgtgat tgaagatatg cacttagcgg aactccctaa
     7081 aaatgccaac attaagcagt tttttaatgc accgtggcga attaaagggt tagattccag
     7141 tcaagtgact tgtattgtgg aattacagca ataaaccaca gatatattca ttttaggaga
     7201 ggctat
//
LOCUS       DANLXD010000113         7005 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.114, whole genome shotgun sequence.
ACCESSION   DANLXD010000113 DANLXD010000000
VERSION     DANLXD010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7005)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7005)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7005
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.114"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            22..1284
                     /locus_tag="PXD18_002165"
     CDS             22..1284
                     /locus_tag="PXD18_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HDL6302553.1"
                     /translation="MGTLNSFLGIIVLLFIAFLFSSNKRAINVRTVLGALALQVAIGA
                     LVLYVPAGRDALNAMATGVSKVISYGNEGISFLFGGLVSDKMFEVFGGGGFVFAFRVL
                     PVIIFFSALISLLYYIGVMQWVIRILGGLLQKALGTSKAESMSAAANIFVGQTEAPLV
                     VKPYISKMTESELFAIMAGGLASIAGSVMAGYAGMGVPLTYLIAASFMAAPAGLLFAK
                     IMVPQTEKFRDELEAVDLEKPANILDAAASGASSGMQLALNVGAMLIAFVALIALVNG
                     ILGGIGGWFGYDTLNLGQIFGWVFKPLAWVIGVPWEEAEIAGQMIGLKLAVNEFVGYL
                     EFAKYLAPESTVHLTDKTVAIITFALCGFANFSSIAILIGGIGAMAPSRRGDIARLGI
                     KAVIAGSLANLMSATIAGLFIGLGGAVL"
     gene            1429..2205
                     /gene="deoC"
                     /locus_tag="PXD18_002166"
     CDS             1429..2205
                     /gene="deoC"
                     /locus_tag="PXD18_002166"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HDL6302554.1"
                     /translation="MNLKKSAEIALSLMDLTTLNDNDTDEKVIALCQQANTKFGTPAA
                     ICIYPRFIPIARKALKQQGIEQVKIATVTNFPHGNDDIEIAVAETKAAVAYGADEVDV
                     VFPYKALIAGNEQIGFDLVKQCKAVCAANNVLLKVIIETGELKSAELIRKASEISIQA
                     GADFIKTSTGKVAVNATLESARIMLETIRDLGVADRVGFKAAGGVKTSEEAAQYLALA
                     ESILGNDWVSASHFRFGASSLLANLLATLNDEQQQAVQGY"
     gene            2226..2945
                     /gene="deoD"
                     /locus_tag="PXD18_002167"
     CDS             2226..2945
                     /gene="deoD"
                     /locus_tag="PXD18_002167"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDL6302555.1"
                     /translation="MATPHINAPEGAFADVVIMPGDPLRAKYIAETFLEDAKEVTNVR
                     NMLGYTGTYKGRRISVMGHGMGIPSCSIYAKELITEYGVKKIIRVGSCGAVRNDVKVR
                     DIVIGVGACTDSKVNRIRFRDNDFAAIADFDMTLAAHQAAKAKGIEARFGNLFSADLF
                     YSPDVEMFDVMEKYGILGVEMEAAGIYAVAAEYGAKALAICTVSDHIRTGEQTTSEER
                     QLTFNGMIEIALESVLIGDKQ"
     gene            complement(3021..3872)
                     /locus_tag="PXD18_002168"
     CDS             complement(3021..3872)
                     /locus_tag="PXD18_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDL6302556.1"
                     /translation="MQTHRAIIESIFALAPKNELWATPISGLTVHAADRSIRFNGYIQ
                     DPSLCVVLLGERQICTNGHCQVFGNQEMMFCPVNLPIVTQTLSVAENQPYLAISLRLD
                     FDLIAKIITQLPPQKISENINQRTKWELENEIKDCLLRLLNLLNSPNHIHFLAPLILN
                     ELYFYLLQSEQGGYIRSLLSQDGNIAKIANATKILERKFADTLNMSALAEEVGMSVAG
                     FYAHFKSVTSMTPLQYQKSLRLNAAREKLQAGVSVSETAYQVGYESPSQFSREYKRQF
                     GESPKGR"
     gene            3987..4418
                     /locus_tag="PXD18_002169"
     CDS             3987..4418
                     /locus_tag="PXD18_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organic hydroperoxide resistance protein"
                     /protein_id="HDL6302557.1"
                     /translation="MKIFYHTSATATGGRDGRTQVDDGSIGFDLVGFQNESGKVGTNP
                     EQLFAMGYAACFDSAMNHVAPTLGIKPTKSSTTVAVGIGQKADGAFGLDLDITITVEG
                     ISAEEAKTLISKAHEVCPYSNATRGNVDVRLHVKVVSEFDL"
     gene            4435..5115
                     /locus_tag="PXD18_002170"
     CDS             4435..5115
                     /locus_tag="PXD18_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HDL6302558.1"
                     /translation="MKMLDFETTVKTRQSIRKFLPLPMTETEIKQILADAQNAPSACN
                     TQPWLVHVASGETLARLKARFKKTFEAGINDADFEFNQTKFTGDYEPRWRNQYSHVFT
                     TSYGIPREDKAGRQVVYDDNIVGYGAPHMAFLFMPSIDGHDVNIASDVGMYSQTFLLS
                     LTARGFGGIPQLALAMFAKDVREELGIPEHYKLLHAISFGHPDWDAMQNKHHLGRVPV
                     EESATLHW"
     gene            5179..6303
                     /locus_tag="PXD18_002171"
     CDS             5179..6303
                     /locus_tag="PXD18_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent flavin oxidoreductase"
                     /protein_id="HDL6302559.1"
                     /translation="MINLFTPYTLNNDVEIKNRLVVAPMTHSASNDDGTISEQERHFL
                     HNRAADMGLFITAATGVMRNGKAFYGQPEALDERYLASLTETANILKNQGTKAILQIF
                     HGGAQAIPALLDGANAVAPSEHANGAKALTADEVKQMIQAFANATDLAIQAGFDGVEI
                     HGANGYLIQQFFSTEFNQRTDEWGGSLEKRLRFPLAVVEAAVSVREKHQRPDFIIGYR
                     FSPEEPGEHGLTMTDTYALIDALCEKPLQYLHISLWDFGKKARRGADTNFTRMQLVHQ
                     HINGRLPLIGVGNLLTGEQIRKAYATGWAEFIALGKAVMLNPNVATLLKDNRDSEIVS
                     ELDPQQADHYGIPDRLWGYCVQGGAWLPPLKGQNGQPMDI"
     gene            6387..7004
                     /locus_tag="PXD18_002172"
     CDS             6387..7004
                     /locus_tag="PXD18_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HDL6302560.1"
                     /translation="MITLHYLNSSCSHRIVWLLEALGLDYELKIYHREESGFAPMEVK
                     ALHPLGKAPVLQDGDLVLAEGNAIIQHLIARYAEGKFEPTRGSEAYSMYHYWLSISAS
                     LFSANLVTMLANRSDLGAFGDYAKAQTPLYFNHIEQTLSDKKWIVGDELTGADFSLCF
                     PLQWGRNFVEMANYPNIARYLEQVENHPAYQKANQKALKLDMNRF"
BASE COUNT         1972 a         1412 c         1600 g         2021 t
ORIGIN      
        1 caatttataa ttagaggttc tatgggtact cttaacagct ttttaggcat tattgtttta
       61 ctattcattg catttttatt ttcgagcaat aaacgtgcaa taaacgtgcg taccgtatta
      121 ggcgcattag cattgcaggt agctattggt gcattggtgc tttatgtgcc ggcagggcgt
      181 gatgccttga atgcgatggc aacaggtgtg tcaaaagtga tttcttacgg taatgaaggg
      241 atttcatttt tattcggtgg cttagtcagc gacaaaatgt ttgaagtatt tggcggcggc
      301 ggctttgtgt tcgctttccg tgtacttccg gtgattattt tcttctctgc actcatttct
      361 ttgctttact acattggagt gatgcaatgg gtaatccgta ttttaggtgg tttattacaa
      421 aaagcattag gtacatctaa agcggaatct atgtctgcgg cagctaatat tttcgttggc
      481 caaactgaag ctccattggt agtaaaacct tatatcagca aaatgacaga atctgaactc
      541 tttgcgatta tggcaggggg cttagcttct attgcaggtt ctgttatggc tggttacgca
      601 ggaatgggcg taccattaac gtacttaatc gcagcctcct ttatggcggc tccggcaggg
      661 ttattattcg ccaaaattat ggtgccacaa accgaaaaat tccgtgatga actagaagcg
      721 gtagatttag aaaaaccggc aaatattctt gatgcagcag cttcaggtgc ttcttcaggt
      781 atgcaactgg cattaaacgt aggggcaatg ttaattgcat tcgtggcgtt aattgcatta
      841 gtgaatggta ttttaggagg tattggcggc tggttcggtt atgatacctt aaacttaggt
      901 caaattttcg gctgggtatt taaaccgctt gcgtgggtaa tcggtgtgcc ttgggaagaa
      961 gcagaaattg cggggcagat gatcggctta aaattagcgg taaatgaatt cgtgggttat
     1021 ttagagtttg ctaaatactt agctcctgag tcaaccgtac atttaacgga taaaactgtt
     1081 gcgattatta cctttgcact ttgtggcttt gcgaacttca gctcgattgc gattttaatc
     1141 ggtggtatcg gggcaatggc tccaagccgt cgtggtgata ttgcccgact tgggattaaa
     1201 gccgtcattg ctggctcact tgccaactta atgagtgcaa ccattgccgg cttgtttatc
     1261 ggcttgggtg gagcagttct ctaatccagt ttgtataaaa ccactagaaa tagtggtttt
     1321 atcttttttt atctgacgta aacggttgct tttggtttgt ctatttacaa gcggtcagat
     1381 ttttataaaa ttttaccaac caccacgcat ttaataaaag gagacactat gaatttaaaa
     1441 aaatccgctg agattgctct ttcgttgatg gatctcacca cattaaatga caatgatact
     1501 gatgagaaag tcatcgcatt atgccaacaa gcgaacacca agtttggcac accggcagca
     1561 atttgcattt atccacgttt tatcccgatt gcccgcaaag cattgaaaca gcaaggtatc
     1621 gagcaagtaa aaattgcgac agtcacgaat ttccctcacg gtaatgatga tattgaaatt
     1681 gcggtagctg agaccaaagc cgcagttgct tatggggcag atgaggtaga tgtggtattc
     1741 ccttataaag cattaattgc aggtaatgag caaataggtt tcgacttggt aaaacaatgc
     1801 aaagcagttt gtgctgccaa taatgtgttg cttaaagtga ttattgaaac cggcgagtta
     1861 aaatcagcag agcttattcg caaagcaagc gaaatttcga ttcaagcagg ggctgatttt
     1921 attaaaacct caaccggcaa ggtggcagtg aatgctaccc ttgaatctgc ccgcattatg
     1981 cttgaaacca ttcgtgattt aggtgtggca gaccgtgttg gctttaaagc tgcaggtggg
     2041 gtaaaaacct cggaagaagc cgcccaatat cttgcacttg cggaatctat tttaggcaat
     2101 gactgggtga gtgcatcaca ttttcgcttc ggtgcatcaa gtttattagc taatttatta
     2161 gcaacattga atgatgaaca gcagcaagct gttcaaggtt attaattaat aaagaggaac
     2221 ataaaatggc tactccacac attaacgcac ctgaaggtgc tttcgctgac gttgtaatta
     2281 tgccgggcga tccgcttcgt gctaaatata tcgctgaaac ctttttagaa gatgcaaaag
     2341 aagtgaccaa tgttcgcaat atgttaggct acaccggcac ttataaaggt cgccgcattt
     2401 cagtaatggg gcacggtatg gggattccat cttgctcgat ttacgctaaa gaattaatta
     2461 ctgaatatgg cgtgaagaaa attatccgtg tcggctcgtg cggtgcggta cgtaatgatg
     2521 tcaaagtgcg tgatattgtc atcggtgttg gggcttgtac cgattctaaa gtaaaccgta
     2581 ttcgcttccg tgataacgat tttgcggcga ttgctgattt tgatatgaca ttagctgctc
     2641 accaagcagc taaagcgaaa ggcattgaag ctcgtttcgg taatttattc tcagccgatt
     2701 tattctactc acctgatgtc gaaatgtttg atgtaatgga aaaatacggc attttaggcg
     2761 tagaaatgga agcagcaggc atttatgcgg tagcggcaga gtatggagca aaagcattag
     2821 caatttgcac cgtttcagac catatccgca ccggtgagca aactacctct gaagaacgtc
     2881 aattaacctt taatggtatg attgaaattg cgttagagtc agtattaatt ggcgataagc
     2941 agtaatttct aacctgacaa gcggtgaaat tttgcaaaaa atttgcagaa tttgaccgct
     3001 tgttattttt gattcttcct ttatcttcct ttcgggcttt cgccaaactg ccttttatat
     3061 tctcgactaa actggcttgg gctttcatag ccgacttgat aggcggtttc actcacgctt
     3121 actcctgctt gtagtttttc ccttgccgca tttagtctta acgatttctg atattgcagt
     3181 ggtgtcattg aagttacgct tttaaaatga gcgtaaaacc ccgccacgct cattcctacc
     3241 tcttcagcca gtgctgacat atttagtgta tcggcaaatt ttctttctaa gatttttgtt
     3301 gcattggcaa ttttagcaat attgccatct tgagagagta gagagcgtat atagccacct
     3361 tgctcagatt gtaataaata gaaatagagt tcgtttaata tcaatggtgc aagaaaatga
     3421 atatgatttg gagaattaag caaatttagt aagcgtaaca aacagtcttt aatttcattc
     3481 tccagctccc atttagtgcg ttgattaatg ttttcactta ttttctgtgg gggaagctgc
     3541 gtgataattt tggcaataag atcaaaatcc aagcgtagtg aaatcgcaag ataaggctga
     3601 ttttctgcaa ctgataaggt ttgggtaaca atcggcaaat tcacagggca aaacatcatt
     3661 tcctgattac cgaagacttg gcaatgtcca ttggtacaga tttgccgctc gcctaataat
     3721 actacacata aacttgggtc ttggatataa ccgttaaatc taatagaacg atcggcagcg
     3781 tgaacggtta gccctgaaat gggagtagcc caaagttcat ttttcggagc gagggcaaaa
     3841 atagattcaa taatagctcg atgagtttgc ataataatct cacttttaga aaattaggca
     3901 tattttatag aaaatcaggc aagacgacaa atagcaaaaa gcggataata tccccaatca
     3961 aataaagcat ttaataggag caaaatatga aaatttttta tcacacatca gcaactgcaa
     4021 ccggtggtcg tgacggcaga acccaagtgg atgacggttc tatcggtttt gatttagtcg
     4081 gtttccaaaa tgaaagtggc aaagtaggca ctaatccgga acaattattc gcaatgggct
     4141 atgctgcctg ctttgacagt gcaatgaatc acgttgcccc aaccttaggc attaagccaa
     4201 ccaaatccag taccactgtt gcagttggga ttggtcaaaa agctgatggt gctttcggct
     4261 tagatttaga tattaccatt actgtggaag gcattagtgc ggaagaagcg aaaactttaa
     4321 ttagcaaggc acacgaagtt tgcccatatt caaatgcaac ccgtggtaat gtagatgtgc
     4381 gtttacacgt taaagtcgtg agtgaatttg acttataaaa aataaatagg ggaaatgaaa
     4441 atgttagatt ttgaaaccac ggtaaaaaca cgacaatcaa tccgcaagtt tttaccgctt
     4501 ccgatgacgg aaactgaaat caaacaaatt cttgccgatg cacaaaatgc cccttcggct
     4561 tgtaatacac agccgtggtt agtacacgtt gcctctggtg aaacgctagc acgcttaaaa
     4621 gctcgtttta aaaagacttt tgaagcgggc attaatgatg cggattttga gttcaatcaa
     4681 acgaaattta ccggtgacta cgaaccacgt tggcgtaacc aatacagcca cgtttttacc
     4741 accagctatg gcattccccg tgaagataaa gccggtcgcc aagtggtgta tgatgacaat
     4801 attgtcggtt atggtgcgcc acatatggca ttcctattta tgccaagcat tgacggacac
     4861 gatgtcaata ttgccagcga tgttggtatg tattcgcaaa ctttcttgct ctcactcacc
     4921 gctcgtggtt ttggcggcat tccgcagctt gcccttgcga tgtttgctaa agatgtgcgt
     4981 gaagagttag gcattcctga acattacaag ctcctccacg ccatttcttt cggacaccca
     5041 gattgggacg ctatgcagaa caaacaccat ttagggcgtg tgccggtgga agagagtgcg
     5101 accttacatt ggtaataaac aagcggttga tttttcgcaa aaatttgcga aatcaaccgt
     5161 attttttagg agaatacgat gataaattta tttacccctt atactctgaa taacgatgta
     5221 gaaattaaaa accgccttgt agttgcccca atgacccatt ccgcctccaa cgatgacggc
     5281 acaattagcg agcaagaacg ccatttcttg cataatcgtg cagcagatat gggcttattt
     5341 atcaccgcag caaccggggt aatgcgtaac ggcaaagcgt tttacggtca gccggaagct
     5401 cttgatgaac gctatttggc aagcctgaca gaaactgcca atatcttgaa aaatcaaggc
     5461 accaaagcga ttttgcaaat tttccacggt ggggcacaag ctattcctgc cttgcttgac
     5521 ggggcgaatg cagttgcgcc gtccgagcac gccaacggtg ctaaagccct aacggcggac
     5581 gaagtgaagc aaatgatcca agctttcgct aatgccaccg atttagctat tcaagccggt
     5641 tttgatggtg tggaaattca cggggcgaac ggctatttaa ttcaacaatt tttctctact
     5701 gaatttaatc aacgcactga tgaatggggc ggtagccttg aaaaacgctt gcgtttcccg
     5761 ttagcggtgg ttgaggcagc ggtcagcgtg cgtgaaaaac accaacgccc tgattttatt
     5821 atcggctacc gtttctcacc ggaagagccg ggcgaacacg gcttaaccat gaccgatacc
     5881 tacgccctga ttgatgcttt gtgcgaaaag ccgttgcaat acttgcacat ttcactctgg
     5941 gatttcggca aaaaagcccg ccgtggtgca gataccaact tcacccgtat gcaactggta
     6001 caccaacaca tcaacgggcg tttaccgctg atcggcgtgg gtaacttatt aaccggtgaa
     6061 cagatccgta aagcttatgc aacaggctgg gcagaattta tcgccttagg taaagcggta
     6121 atgctcaacc cgaacgtggc gaccttgttg aaagataatc gagacagtga gattgtcagc
     6181 gaactcgacc cgcaacaagc cgaccactac ggcattcccg atagactatg gggctactgc
     6241 gtgcaaggtg gtgcttggtt accgccgctt aaagggcaaa acgggcaacc aatggatatt
     6301 taatcattac agacaagcgg tcattttttt gtaaaaattt gcaattaagt gaccgcattt
     6361 tttcaattat ctgaaggaga aaaattatga ttacgttaca ttacctgaac agttcctgct
     6421 ctcaccgcat cgtttggttg ttggaagcct taggcttgga ttacgagcta aaaatctacc
     6481 atcgtgaaga gagcggtttt gcacctatgg aggtaaaagc cttgcaccca cttggcaaag
     6541 cccctgtgtt gcaagatggc gatttggtgc ttgccgaagg caatgcgatt atccagcatc
     6601 tgattgcccg ttacgccgaa gggaaatttg agccgactcg tggtagcgaa gcctattcaa
     6661 tgtatcacta ctggttgtcg atttctgctt cattattctc ggcaaacctt gtgacaatgt
     6721 tggctaatcg ctctgatctc ggagcttttg gcgactacgc aaaagcgcag actccgctgt
     6781 attttaacca tattgagcaa acactttcag ataaaaaatg gattgtgggt gatgaactaa
     6841 ccggtgcgga tttttctctc tgtttcccac tacaatgggg gcgtaatttt gttgaaatgg
     6901 caaattaccc gaatattgca cgctatttag aacaggtgga aaatcaccct gcttaccaaa
     6961 aagcgaatca aaaagccctg aagcttgata tgaatagatt ttaat
//
LOCUS       DANLXD010000114         6936 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.115, whole genome shotgun sequence.
ACCESSION   DANLXD010000114 DANLXD010000000
VERSION     DANLXD010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6936
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.115"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..424)
                     /locus_tag="PXD18_002173"
     CDS             complement(<1..424)
                     /locus_tag="PXD18_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302561.1"
                     /translation="MITSNLERSFHGLNIAQHNYKIFLDESGGNIGKLKHTPNDKKGS
                     NFNRTISSHIGVPPVFVLGGIAQISNANLIAPDWRKLLHLQNKELKFSKIGKNFFNKL
                     GSKELRKVLEWINENNLCIHFALYDWVYFYDVDIIDSAL"
     gene            complement(451..1125)
                     /gene="cas4"
                     /locus_tag="PXD18_002174"
     CDS             complement(451..1125)
                     /gene="cas4"
                     /locus_tag="PXD18_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein Cas4"
                     /protein_id="HDL6302562.1"
                     /translation="MGDLQNSAEILPLVQPKFGDDKRSISLSALQHYAFCPRQCALIH
                     NEQVWAENYLTAQGQALHERVDSGEPEVRKGIRFERTVHVAAEKLGISGILDLVERDL
                     KTGELKPVEYKRGKPKLDPIDEIQLCAQALCLEEMTEQTINEGALWYMQTRHRLPIIF
                     STELRTKTLATIAEVRSLLDSGTTPPPEYSKRCKACSLIDLCQPKLLERDRSKGYVVG
                     VFGSLL"
     gene            complement(1125..1988)
                     /gene="cas7c"
                     /locus_tag="PXD18_002175"
     CDS             complement(1125..1988)
                     /gene="cas7c"
                     /locus_tag="PXD18_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas7/Csd2"
                     /protein_id="HDL6302563.1"
                     /translation="MSIQNRYEFVFFFDVTNGNPNGDPDAGNMPRLDPETSKGLVTDV
                     CLKRKIRNFIEMSYENEAGYEIYVKEKSVLNLQNKRAYEALGIESEAKKLPKEEAKAR
                     EITAWMCKNFFDIRTFGAVMTTEVNSGQVRGPVQLAFAQSIDPIIPLEVSITRMAVTN
                     EKDLEKERTMGRKYIVPYALYRVHGFISAKLAEKTGFSDEDVQKLWQALQLMFEHDRS
                     AARGEMAARKLIVFKHDSELGNQPAHKLFDSVKVERINGEKDTPAKDYDDYCISVQTE
                     GLTGVTVEELL"
     gene            complement(1998..3779)
                     /gene="cas8c"
                     /locus_tag="PXD18_002176"
     CDS             complement(1998..3779)
                     /gene="cas8c"
                     /locus_tag="PXD18_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas8c/Csd1"
                     /protein_id="HDL6302564.1"
                     /translation="MITALTRYYYRLAAQEDRLTGEAKVPSYGFSEEKIGWVLELDSK
                     GNLVNVISNLTEDKKPKPKLMSVPRPEKRTSGIKPNFLWDKTAYVLGIESNPDKATAK
                     DQPINFAEKTFEAFKQYHLDLLADSNDEGLMAIRNFLQQWQPTHFAESICPREILDAN
                     VVFKLVGTSGYIHQREAAQTLWTSLLINQSDNAEKGLCLISGKLSPIQRTHPPIKGVF
                     GGQSSGGSIISFNKESFTSFGKEQGSNAPVSEQAAFAYTTALNYLLRTEKHRLTIGDA
                     STVFWAEADNTTQAEAAEGFFAALMTPPDDEQENQKIFEELQKISKGRPLAEISPELS
                     ENTRFYVLGLAPNAARISVRFWLDTTFGQLAKNLSEHWQDLALEPCPWKTPPSIWRLL
                     LQTASLGKSENISPVLAGEMARAVISGHLYPMSLLSQLVTRIRADGDINGLRVALMKA
                     VLQRKFRKGFIKEGVPMSLNKESDNQAYLLGRLFAVLERIQSQALGELNAGIADRYYG
                     SASAVPFSVFPRLLSGAKHHLSRLRKDKGGMAVNLDKDLGEIIASLPENFPRHLSIDE
                     QGRFAIGYYHQKQSYFAKKETTESIEN"
     gene            complement(3801..4478)
                     /gene="cas5c"
                     /locus_tag="PXD18_002177"
     CDS             complement(3801..4478)
                     /gene="cas5c"
                     /locus_tag="PXD18_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas5"
                     /protein_id="HDL6302565.1"
                     /translation="MPNKIRLHIWGDYACFTRPEMKVERVSYDVITPSAARGILAAVH
                     WKPAIRWVIDKIYVLQPIQFESVRRNELGSKISASKISGAMKRKTVADLYTVIEDDRQ
                     QRAATVLKNVGYVIEAHAVLTKMAGEAETVTKHIEMFKRRAKKGQCFQQPCMGVREFA
                     ANFALIDDDEPLPECFLAENERDRDLGWMLHDIDFEHGNQPRFFRAEMKNGVIDVPPF
                     YAEEVKS"
     gene            complement(4720..6471)
                     /locus_tag="PXD18_002178"
                     /pseudo
     CDS             complement(4720..6471)
                     /locus_tag="PXD18_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250669.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF87 domain-containing protein"
     gene            complement(6461..6889)
                     /locus_tag="PXD18_002179"
     CDS             complement(6461..6889)
                     /locus_tag="PXD18_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302566.1"
                     /translation="MAGDVPMTSCIGKVEEPLIITPGVGKYKKGYGQPFDAHREKANE
                     AIDSASSILCIGYGFNDDHLQTHLTGKIKSGVKTLLLTRGLSENARNVVKEAPNCKAL
                     IFDGDKAGTRVVSKQEETFIPNVHWWDVEFFVKEILENGK"
BASE COUNT         1945 a         1581 c         1290 g         2120 t
ORIGIN      
        1 ttaaagcact atctataata tctacatcgt agaaatacac ccaatcatac aaagcaaaat
       61 gtatacatag gttattttca ttaatccatt ccaagacttt tcttaattct tttgaaccaa
      121 gtttattaaa aaaattcttt cctattttac taaactttaa ttccttattc tgcaaatgaa
      181 ggagttttct ccaatcagga gcaattaaat tagcattact aatttgagca atccctccta
      241 atacaaatac aggaggaacc ccaatgtggg aagaaatggt tctattaaaa ttactacctt
      301 ttttatcatt aggcgtatgt tttaacttcc caatatttcc accactctca tcaagaaata
      361 ttttgtagtt atgctgtgct atatttaatc cgtgaaatga tctttctaag tttgaagtta
      421 tcacaacaag tccctcccca aagtaggtaa ttataataaa gatccaaaca ctcccaccac
      481 ataccccttc gatctatccc tttccaacaa ctttggttgg cagaggtcga taagcgagca
      541 ggctttgcag cgtttgctgt attctggagg aggtgtggtt ccgctatcta agagcgaccg
      601 cacttcggca atggtggcga gggttttggt gcgtagttcg gtggaaaaaa tgatcggcaa
      661 acggtggcga gtttgcatat accacaacgc cccttcgtta atcgtctgct ctgtcatttc
      721 ttccaaacat aaggcttggg cacagagttg gatttcatca atcggatcaa gtttgggctt
      781 gccacgtttg tattccactg gttttagctc gcctgttttt aggtctcgct caaccaaatc
      841 caaaatgccg cttatgccta atttttcggc tgcaacgtga accgttcgct caaagcgaat
      901 ccctttgcga acttctggct caccactatc tacccgctcg tgcaacgctt gaccttgtgc
      961 ggtgagatag ttttctgccc acacctgttc gttgtggatc agcgcacatt gacgtgggca
     1021 gaaggcatag tgttgcaaag cggaaagcga aattgaccgc ttgtcatcgc caaattttgg
     1081 ctgaacaagc ggtaaaattt ccgcagaatt ttgcaaatcg cccattacag taattcttca
     1141 acggttacac ccgttaagcc ttcggtttgt acgctgatac agtaatcgtc atagtctttc
     1201 gctggcgtgt ctttttcacc gttgattcgc tcaactttta ccgagtcaaa cagtttgtgt
     1261 gcaggttggt tgcctaattc gctgtcgtgt ttaaatacga tcagtttacg agctgccatt
     1321 tcgcctcgtg cggcagaacg gtcgtgttca aacataagtt gcaaggcttg ccaaagtttt
     1381 tgtacatctt catcagaaaa gcccgttttt tcagcgagtt tagctgaaat aaagccgtga
     1441 acacgataaa gtgcgtaagg cacgatatat ttacgcccca tagtccgttc tttttcaaga
     1501 tctttttcgt tggtcactgc cattcgtgtg atcgatactt ctagcggaat aatcggatcg
     1561 atagattgag cgaacgccaa ttgcactggg cctcgcacct gtccgctgtt tacttcggta
     1621 gtcattaccg ccccaaaggt gcgaatatcg aaaaagtttt tgcacatcca agcggtaatt
     1681 tctcgggctt tagcttcctc ttttggtagt tttttcgctt ccgattcaat ccctaatgct
     1741 tcataagcac gtttgttttg taaattcaga acactttttt ctttaacata aatttcgtaa
     1801 cccgcctcgt tttcatagct catttcaata aaattgcgga ttttgcgttt taggcaaaca
     1861 tcggtgacta aacctttact ggtttcagga tcaaggcgtg gcatatttcc tgcatctgga
     1921 tcaccatttg ggttaccgtt ggttacatca aagaaaaaaa caaattcata gcggttttga
     1981 atagacatag tgtttcctta gttttcaata gactcagtgg tttctttttt agcgaaatag
     2041 ctttgttttt ggtggtaata accaatcgca aaacgccctt gttcatcgat acttaaatgg
     2101 cgagggaaat tttccggcaa gctggcaata atctcaccta aatccttatc cagattaacc
     2161 gccattccgc ccttatcttt tctcaagcga gataaatggt gttttgcacc gcttaataag
     2221 cgagggaata ccgaaaacgg cacggcagaa gccgaaccat aatagcggtc ggcaatgccg
     2281 gcatttaatt cgcctaatgc ttggctttgg attctttcta atactgcaaa taacctgccg
     2341 agcaagtaag cttggttatc gctttcttta tttaagctca taggaactcc ttctttaata
     2401 aaaccttttc taaattttcg ttgtaagact gctttcatca acgctactcg caaaccgtta
     2461 atatcgccgt ctgctcggat tcgagtcact aactgtgaaa gtaaactcat cggatataaa
     2521 tgaccgctaa taactgcgcg agccatttca cccgccaaga ctggagaaat attctcactt
     2581 ttacctaatg aagcggtttg taataatagt cgccaaatgg aaggtggtgt tttccatggg
     2641 caaggctcaa gagcgagatc ttgccaatgc tcgctgaggt tttttgccag ttgcccaaag
     2701 gtggtatcca gccaaaaacg taccgaaatg cgagctgcat ttggagcaag ccccaacaca
     2761 taaaaacggg tgttttcaga taattctggg gaaatttctg caagcggtcg tcctttgctg
     2821 attttttgca attcttcaaa gattttttgg ttttcttgct catcatctgg aggcgtcatt
     2881 aaagcagcaa aaaagccttc agcagcttca gcttgggtgg tattgtctgc ttctgcccaa
     2941 aagacagtgc tggcatcacc aatagttaaa cgatgtttct cggtgcgtaa caaataattt
     3001 aaagcagtag tgtaggcaaa ggcggcttgt tcagaaacag gggcattact accttgttcc
     3061 ttgccaaatg aagtgaagga ttctttattg aaagagatga ttgaaccacc ggaactttgc
     3121 ccaccaaata cccctttaat aggaggatga gttcgttgaa ttggcgataa tttgcctgaa
     3181 attaagcata aacctttttc agcattatca ctttgattta tcaacaaact tgtccaaagg
     3241 gtttgtgcag cttctcgctg atgaatataa ccgcttgtgc cgactaattt aaacacgaca
     3301 ttcgcatcaa gaatttctct tgggcagatt gattcggcaa aatgtgtggg ttgccattgt
     3361 tgcaggaaat ttcttatcgc cattaaacct tcatcattgg aatctgcaag caaatccaaa
     3421 tggtactgtt taaatgcctc aaaggttttc tcggcgaaat tgatgggttg atctttggcg
     3481 gtggctttat caggattact ttcaatgcct agcacataag cggttttatc ccacagaaaa
     3541 ttgggcttaa tgccagacgt gcgtttttca gggcgaggta cgctcatcaa tttcggtttt
     3601 ggtttcttat cttctgttaa atttgagatc acattgacca aatttccctt tgaatctaat
     3661 tctagtaccc aaccgatttt ttcttcactg aaaccataag aaggcacttt agcttcgcct
     3721 gttaagcgat cttcttgtgc tgcaaggcgg taataatagc gagttaaggc ggtaataata
     3781 gcgagttaag gcggagagaa tcatgatttg acctcctctg cataaaatgg tggcacatca
     3841 atcacgccat ttttcatttc cgcacggaag aaacgaggtt gattaccgtg ctcaaaatca
     3901 atgtcgtgca acatccagcc taaatcccga tctcgctcat tttctgccaa aaaacactca
     3961 ggtaacggtt catcgtcatc aatcaaggca aaatttgcgg caaattcacg cacgcccata
     4021 caaggctgct ggaaacattg cccctttttc gcacggcgtt taaacatttc aatatgcttg
     4081 gtgacggttt ccgcctcgcc tgccattttg gtcagcactg cgtgagcttc gatcacataa
     4141 ccgacatttt tcagcacagt agcagcacgt tgttggcggt cgtcttcaat cacagtatat
     4201 aaatccgcca ctgttttacg cttcattgca ccactgattt tactggcaga aattttactg
     4261 cctaactcat tacggcgaac agactcaaat tgaatcggtt gtaatacata aattttatca
     4321 atcacccagc gaattgccgg cttccaatgc accgcagcca aaatcccccg tgccgcagac
     4381 ggcgtaatca catcataaga cacccgttct accttcattt caggacgggt aaaacaagca
     4441 taatcacccc aaatatggag cctgattttg tttggcataa tagaatgctc cttttaatta
     4501 tgtaacacac acctccccga agggaggtga aatttcttta gcttatatta taactgcttt
     4561 ggtttcaacc cacgcactca gtaaaatgcg aaaaatttta tggcttatta tattaagcgg
     4621 tcggatttac ttagaaagtt gcaaagttat ttgagtattt aaccgcttgt atttcaaaaa
     4681 tagtcagaaa aataacagca ttctaggtac aatatttttc taagaacgaa cttgtctccg
     4741 caatgcctct actgcgtttg acacagcatt tggtttgggc tcctggtttg cccaatcaga
     4801 ccagaattgg cgtgtagcac tttctggggc tatatgcggt ttagcaagtt tgattcgtgt
     4861 aggtaataga atcgaatcgc ctagcaataa cgcttcgcct aaatcaagta acggcaatat
     4921 atcagtaatt ccaaccatag attccggcaa taaacgcttt acaacacttt gatcttgacc
     4981 atttgttaat cgtaaaacca agaaattatt acattgactc aaaattgttc ggcttacatc
     5041 tgaaggacgt tggctaacga ccaacaaaga cacgccatat tttctacctt ctttcgcaat
     5101 ccgctcaaag gcttccaatg cgcgtttttc cgctgcttcc gctgaatctc gaacagggag
     5161 atataaatgt gcttcatcgc aaataatcgt tagtggatgg cgggaatctt tatccatcca
     5221 aaattgaatg ttgtataaaa ggcgggcaag aactcccgta acaatcggta aaacatccga
     5281 cgggacttcc gaaaaatcaa taatttttat ccctttttcg ctctcagaag cagaaaacag
     5341 ttttgacaac atattttcca gccacccata gctgttgcac tctactggcg gttggaacat
     5401 aaaaccgcaa cgtctgtcat ctattttggc tttcatcctt cccataaacc tagacaactt
     5461 actataccaa ggaccttgct ttgttcctga acctccctct ttaggtacca tctcagaatt
     5521 atctttatct aaacgagcta acaataattc aatagaatac ggaattggcg aatcaacagt
     5581 aaacgtttcc aaaacatcat ttctttcttc cttattcaat gtttgctctt ttaatgcgcg
     5641 aacatgctca gtaaaacgcg ccgcctgatt cggagcatta tcatcactgc gatctaaaat
     5701 taaagccagc atttattccc gattgagcag ccaataggga ataaataaac tgcgttcatc
     5761 tgaaccatcc aaatctcccg gtccagcaat acggtattgc tgagcgatag cgtttttacc
     5821 ttcgcataga gtgctatatt caccgtgcat atcgaataca ataagattag cagcttttaa
     5881 agctgctgca cgttccaata ttaatgcaac tgaccagctt ttaccggaac cagtactacc
     5941 caaaatagca gcgtgccgtt gaaagaattt atctccgttt gctatagcta cagccgtttc
     6001 atcagccata aaatgaccta aagtcagccg ttcattttct tttacgttag cggacaaaag
     6061 attcataaat aattgcagat tgctgccact aatatgaaag caatctctat caatttgcgg
     6121 aaaacaatcc gctccccgct taaaagtgtt gctcaaacta ccatcaacag ctttataagt
     6181 accgattaat actgccttga taaagtcatc ctgactttca cccagaggaa tttcaccctc
     6241 attagatatt tcttctagca gcaatttttc actgatagaa cgcgttaccc gttcgataat
     6301 gccgataagg tactcactag ccgttctgcc ttgaatcgca atcagattac ccacagcaat
     6361 actagtcatt tgttgatgct cttcaacaga aatcaataca cggctggtat ctactgttac
     6421 aaccctgccc aaacgggcat tgtctttaaa attcaatgtt tcatttgcca ttctctaaaa
     6481 tctcttttac aaaaaactca acgtcccacc aatgaacatt aggaataaaa gtttcttctt
     6541 gcttgctaac cacccttgtt ccagccttat ctccatcaaa aatcagagcc ttacaattcg
     6601 gagcttcctt caccacgttt ctggcatttt ctgaaagtcc tcttgtcaga agtagtgttt
     6661 tcacaccact tttaattttg cctgtcaaat gtgtttgaag gtggtcatca ttaaaaccat
     6721 agccgataca taaaattgaa gaagcagaat caatagcttc atttgctttt tctcgatgag
     6781 catcaaatgg ttgtccatag ccttttttat acttcccaac accaggcgta ataattaaag
     6841 gctcttccac tttacctata caacttgtca ttggaacgtc tccagccata aaccaatcta
     6901 aactaccatg cggtttaaag attttgatat gatctc
//
LOCUS       DANLXD010000115         6935 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.116, whole genome shotgun sequence.
ACCESSION   DANLXD010000115 DANLXD010000000
VERSION     DANLXD010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6935)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6935)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6935
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.116"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(74..379)
                     /locus_tag="PXD18_002180"
     CDS             complement(74..379)
                     /locus_tag="PXD18_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HDL6302567.1"
                     /translation="MRKPAHPGQILLDGFIEPNNIKIKELADHLGFSRETLSRVLHGK
                     TPMTANLALSLEEAGISTAKLWLNLQTKYDLWELKQQRLNPVMPFHFGGNYGETAHA"
     gene            complement(388..663)
                     /locus_tag="PXD18_002181"
     CDS             complement(388..663)
                     /locus_tag="PXD18_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011039853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6302568.1"
                     /translation="MIKSFKHKGLKQYFEKGITKGIQLNHQRKIDGILDLIDSAESID
                     EFMPFYQCHELKGNRKGIYSMTVNGNWRITFEFVNGDAYILNYEDYH"
     gene            955..1185
                     /locus_tag="PXD18_002182"
     CDS             955..1185
                     /locus_tag="PXD18_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302569.1"
                     /translation="MNAQATLNNHKDYILCGRKEKRTSDFINVFEVFENEATQEFVIE
                     RAMFRNGKLIDWNQSDKMNAEQAQQLWQAYIH"
     gene            1567..1803
                     /locus_tag="PXD18_002183"
     CDS             1567..1803
                     /locus_tag="PXD18_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302570.1"
                     /translation="MSNQEFVKLGSVEPSTIDELQKEDIRQAILKSVSITPYYVGLEI
                     AVCQAISAINKFSDGCITEELLDTKNGDKYRKNN"
     gene            2110..2185
                     /locus_tag="PXD18_002184"
     tRNA            2110..2185
                     /locus_tag="PXD18_002184"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2143..2145,aa:Arg,seq:tct)
     gene            2372..2878
                     /locus_tag="PXD18_002185"
     CDS             2372..2878
                     /locus_tag="PXD18_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302571.1"
                     /translation="MKTKYKIIIERAKQQGLTHIELTQKHCLYLATSVGKLCYGVANN
                     AEQHIKLAAGEIFTLLTIINHQIQFDEDLELHTWKASGTTPPEQRAIRMLHHTSQFAW
                     FAPWLVDSNEKEQNQNTIRINLFNKCSGILIELNGILKEYELTLDECLDEFLKNKHCL
                     NEFSIHKE"
     gene            2882..3241
                     /locus_tag="PXD18_002186"
     CDS             2882..3241
                     /locus_tag="PXD18_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302572.1"
                     /translation="MTTFSIYTSVWHDSSTKGFRHNIKHKRHDCWRADIRIKQKINDV
                     WVQISRIRKRFKCPEQAKSFVEQWKQIDSPAFMQHQINRQALREELSNLEQRKQKQDG
                     ILEVIEYRISQIKELLK"
     gene            3238..3717
                     /locus_tag="PXD18_002187"
     CDS             3238..3717
                     /locus_tag="PXD18_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302573.1"
                     /translation="MKRNKVESYTIRLLKNNHTKRYFGEVILNGIKEISTAEMMSEIN
                     AIKAVNKRIEALNKTKAVNLPNYPEIRGHQPIMYNYNFEQIEEDPEQVKPKPSKPKRK
                     PFIPYGLNGYFVDSNGNIRLHLDRRASAETITLETDFFNVLAEMVKRTQEANNAKHA"
     gene            3851..4063
                     /locus_tag="PXD18_002188"
     CDS             3851..4063
                     /locus_tag="PXD18_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302574.1"
                     /translation="MIGYEDYTDASLQPEEDPSEEAFILAEENIIELLENNGFETIAT
                     ILAGSDGWRNAINAYLAEQNKHRNEF"
     gene            4076..5026
                     /locus_tag="PXD18_002189"
     CDS             4076..5026
                     /locus_tag="PXD18_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302575.1"
                     /translation="MTTANQQFELILKTESRVVSTNLQTFEEQANQYLATLTTTFETD
                     DDFAKAKEEVKELESIEKKIRDAIKQTQTGEIAELVLTAEQIAERFRQERLTRDKLVK
                     SKETEIKKQIADKAIEEITDTRNKLVKVSDISLALEITMPKHGIANRIAEAQKNKRTI
                     DSLTKAVNAEKALIISEMSVEIGRLTERLEQLAAKSAYLFPDAVKLIATQDDLAPIIQ
                     QRLAEEAEREAAIKAKAEADKVQAEAKAITDKMERKQAVENPQNVAKMNIEEPAQTDG
                     PLGDFIITIRLNQTIQTNAVSIARELKAKFGDSVSLNKAK"
     gene            5067..5861
                     /gene="bet"
                     /locus_tag="PXD18_002190"
     CDS             5067..5861
                     /gene="bet"
                     /locus_tag="PXD18_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage recombination protein Bet"
                     /protein_id="HDL6302576.1"
                     /translation="MTTALQTLTNKLAERFEMGDGSGLVETLKSSAFAGATVSDAQMI
                     ALLVIANQYQLNPWTKEIYAFPGGNGGLTPIVGVDGWVRIINREPQYDGMEFHFTDDY
                     SACTCTIYRKDRSKPIVVTEFMGECKKSSPAWNSHPKRMLRHKAMIQCARLAFGFTGI
                     YDQDEAERIAENEKPPKNITPQNNVVETTAVELISEEQLSQIRQLMQVTGTEEAKILA
                     YIGVQALNQIPKSQAEAVIKKLNLTLDKQNAEKADNGESVGEEIPL"
     gene            5858..6493
                     /locus_tag="PXD18_002191"
     CDS             5858..6493
                     /locus_tag="PXD18_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaJ viral recombinase family protein"
                     /protein_id="HDL6302577.1"
                     /translation="MTGDLIILDCEQGSEEWLNARLGIPTATGIENIVTPSGKKSSAW
                     NSYLAELVAESIEGAKDGFKSSDMARGNELEPLARMAYEFETDTEVVQVGGVYLNAEK
                     QLMVSPDGLIPNLKKGLEIKCPKMKTHIKYLLEGGVPNEYLIQVQSALWVTGYETWDF
                     VSYCPEYQKQPLYIYTAERDPVLMKAFDQYIPQFIKSLYALKGVTAPKGAF"
     gene            6506..6682
                     /locus_tag="PXD18_002192"
     CDS             6506..6682
                     /locus_tag="PXD18_002192"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302578.1"
                     /translation="MTTQKKYELLQNDTINHNGRTLYRIKAICHFRRTAEYSARATHA
                     TAAECYGGIACTST"
     gene            6703..>6935
                     /locus_tag="PXD18_002193"
     CDS             6703..>6935
                     /locus_tag="PXD18_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDL6302579.1"
                     /translation="MKPFDLNKALAGEPVKLRNNDKAFVKYLISDDYIRDNKDHQVQG
                     YTVDEENVFLSEVSWAVSGSHFNDGTIAQYDIVG"
BASE COUNT         2420 a         1410 c         1379 g         1726 t
ORIGIN      
        1 attccttgaa taaaccgccc tcgtggcggt tttcttttcc taagaacaat aaaatcctcc
       61 gaagagggca ttattaagcg tgagcagttt ctccataatt tccaccaaaa tgaaaaggca
      121 taacaggatt taaccgctgc tgctttaact cccataaatc atatttagtt tgtaagttta
      181 gccataactt agccgtacta attcctgcct cttctaaact taacgctaaa tttgcagtca
      241 ttggtgtttt gccgtgtaat actcttgata aagtttcacg agaaaaccca agatgatctg
      301 ctaattcttt aattttgatg ttatttggtt caataaatcc atctaataaa atttgccccg
      361 gatgtgctgg tttacgcata actcccccta atgataatct tcataattca aaatataagc
      421 atcgccattt acaaattcaa atgtaatccg ccagttgcca ttaaccgtca tagaataaat
      481 gccttttcga tttcctttta actcgtggca ttggtaaaaa ggcataaatt catcaatact
      541 ttctgctgaa tcaatcaaat ctaaaatacc atcgatttta cgttgatgat taagctgaat
      601 accttttgtt attccttttt caaaatattg ttttaagcct ttatgcttga agctcttaat
      661 cataataaca cctagcaaac acaatgtgac acaaatatat cacgcacaat aaaaaagaca
      721 atctttttta agtgcttttt ctcctaattg tctttctctt cttatgttaa gtgtttaaaa
      781 aacaagcaat caaacaacct ttctaaaaat aatttctctt taaaatcaat tatttaatca
      841 cgaattgaaa tttgtttggc taaaataatt acaaattgaa ttgacttaat gatttcaatt
      901 tgtgataata aacccatcaa aacaaacaac gccacagaca aagaggaaac caaaatgaac
      961 gcacaagcaa cgctaaataa ccacaaagac tacattttat gcggacgcaa agaaaaacgc
     1021 accagtgatt tcatcaatgt gtttgaggtc tttgaaaatg aagccacgca agagtttgtg
     1081 attgaaagag caatgttcag aaatggcaag ttaatcgact ggaaccaaag cgacaaaatg
     1141 aacgccgagc aagctcaaca actttggcaa gcctacattc actaagaatt tttatcaaag
     1201 cccttcacgg agggcttgaa taaaggttct aaacctcgcc gaaaggcatt gttctttaaa
     1261 aattaaacca aaaacacatc acgacaagcg gattacttag caatgtaatg acattggaga
     1321 gacagaacca atctttgcat aaagcggtaa aacgtatgcg gtaaatgaac ttataggcaa
     1381 gttgtgaaac tctctaagct actcggactg aaagaatagt acggtagttg tggcgaattt
     1441 actggtgatg tgcgaactag cggaaaggtt aagcactggc agtgaatcgg gaagcacaaa
     1501 cgctggttca attccaaagc atatttgaga aagtgtgctt tggaatatta ataacaggag
     1561 aacaaaatga gtaatcagga atttgttaaa ttaggcagcg ttgaaccttc aacgattgat
     1621 gaattacaga aagaagatat taggcaggca atattaaaat ccgtctctat aacgccatat
     1681 tatgtggggc tggaaatagc ggtttgccaa gcaatatcag ccatcaataa atttagtgat
     1741 ggctgtatta cagaagagct tttagatacg aaaaatggtg ataaataccg aaaaaataac
     1801 taatcaataa caccaaagtg atttcatttt ttcggcatta gccctagatg ttgcccaagt
     1861 attatattcc tcgaagttgt ggcaaacaag aggacttggc ccggtggctc acaagtataa
     1921 aaaagagcca ccatctctaa cagctctcaa cagagagtga gacaaataac cccgttttag
     1981 ttttaatgtt ttctaaagtc ggcgttaggc agcgaaacga atgtactaga gagttgttag
     2041 agatggttag tccatcacat tccttagatt gaagtaagcc ctgccgttgg ggttaagcaa
     2101 cggtactttg accgcatagt tcagtggata gagcagctgc cttctaagca gtgggtcgag
     2161 agttcgaatc tctctgcggt cgccatccaa aaccgcttta cgcacatcat cgatgacgag
     2221 cctacgaagt ggaaacctac cgtgtagagc ggttttgaat ggctaagttg tgtaactgct
     2281 acaacttaaa aagagcggtt gataataaac ataatgactc cgtttccccg cctcgtgcgg
     2341 ggcttttttt atccacataa aaggattcaa aatgaaaact aaatacaaaa ttattattga
     2401 gcgagcaaaa caacagggtt tgacccatat tgagcttact caaaaacatt gtctgtatct
     2461 cgctacatca gtagggaaac tgtgctacgg ggtagctaat aatgcagaac aacatattaa
     2521 acttgctgct ggagagattt ttacactact aacgatcatt aaccatcaaa tccagttcga
     2581 tgaagactta gagcttcaca cgtggaaagc tagtggaaca accccacccg agcaaagagc
     2641 gatacgtatg ttacatcata cctcgcaatt tgcttggttt gctccttggt tagtggacag
     2701 caatgaaaaa gaacaaaacc aaaatacaat caggattaat ttatttaaca aatgctctgg
     2761 gattctgatt gaactaaatg gcattcttaa agaatacgag ctaactcttg atgagtgctt
     2821 agatgaattc ttgaaaaata agcattgttt gaatgaattt agtattcaca aggagtaaaa
     2881 aatgacgacg tttagtattt ataccagtgt atggcacgac agctccacga aaggctttcg
     2941 ccacaacatt aagcataaac gccacgattg ctggagagcg gatatccgca taaagcaaaa
     3001 aatcaatgat gtgtgggtgc agatttcaag gatacgcaaa cgcttcaagt gccctgaaca
     3061 ggcaaaatcc tttgtagaac aatggaaaca aattgattca cctgcattta tgcaacacca
     3121 aatcaaccgc caagcattaa gagaagaatt atcaaacctt gagcaacgca aacagaagca
     3181 agacggaata cttgaggtga ttgagtatcg tattagccaa atcaaggagt tgctgaaatg
     3241 aaacgcaata aagtagaaag ctatactatc cgcttattaa aaaataatca tacaaaacgc
     3301 tacttcggag aagttatatt aaacggcata aaagaaatca gcacggcaga gatgatgtct
     3361 gaaattaacg ctattaaggc agtaaataag cgcattgaag ctctgaataa aaccaaagcc
     3421 gttaatttgc ctaattatcc tgaaatccgg ggtcatcagc ctattatgta caattacaat
     3481 tttgaacaaa ttgaggaaga tcctgaacag gttaagccta aaccatcaaa accaaaacgc
     3541 aagccattca taccttatgg gctaaacggc tactttgtgg atagcaacgg taatattcgc
     3601 ttacatctag acagacgagc aagtgccgaa acaattaccc ttgaaactga tttcttcaac
     3661 gttcttgccg aaatggtaaa acgtacacaa gaggcaaaca atgctaaaca tgcttagaca
     3721 atggattaaa tacggcttat acgccctgct ttttatggtt gccatcaccc tcctaatgca
     3781 atgaagagct tatccctgaa agcacctgca agcctgaaac ttgcgaattt aaagtaacgg
     3841 agaaagtgtg atgataggat acgaagacta cacagatgct tcacttcaac cagaagaaga
     3901 ccctagcgaa gaggctttca tcttggctga agaaaacatc atcgagctat tagaaaacaa
     3961 cggctttgaa accattgcca ccatcctagc cggttctgat ggctggcgta acgcaatcaa
     4021 cgcctaccta gccgaacaga acaaacacag aaatgaattt tagaggaata agaaaatgac
     4081 aactgcaaat caacaatttg aacttatttt aaaaaccgaa agccgagtgg tttctaccaa
     4141 cttgcaaact tttgaagagc aagcaaatca ataccttgcc acgctcacca ccacctttga
     4201 aaccgatgat gattttgcaa aagcaaaaga agaagtgaag gagcttgaaa gcattgagaa
     4261 aaaaattcgt gacgcaatta aacaaacgca aactggcgag attgcggaat tggtattaac
     4321 agcagaacaa atcgctgaac gtttccgcca agagcgatta acccgagaca agctcgttaa
     4381 gagcaaagaa acggaaatca aaaaacagat tgccgataaa gccattgaag aaatcactga
     4441 taccagaaac aagctggtta aagtaagtga tatttccctt gccttagaaa tcacaatgcc
     4501 aaaacacggc attgctaatc gtattgccga ggcacagaaa aataaacgca cgattgacag
     4561 cttaaccaaa gccgtgaacg ccgaaaaagc gctgattatc agcgaaatgt cggtagaaat
     4621 cgggcgcttg actgagcgat tagaacagct tgctgcaaaa tcagcttatc tttttcctga
     4681 tgcagtgaaa ttgatcgcaa cccaagacga cctcgcccca attattcaac aacgccttgc
     4741 cgaagaagcc gagcgtgagg cggcgattaa agccaaagca gaagccgaca aagtacaagc
     4801 cgaagccaaa gcgattactg ataaaatgga gcgcaaacaa gcggtcgaaa atccgcaaaa
     4861 tgtggcaaaa atgaacatcg aagaaccggc acaaaccgat gggccattag gcgattttat
     4921 cattactatt cgcttaaacc aaacaatcca aaccaacgca gtcagtattg ctcgtgagct
     4981 gaaagcgaaa tttggggata gcgtttcgct caataaggct aaatgatttg ataccgcaca
     5041 aattcaacct aaataaggat catattatga caactgcatt acaaacacta accaacaaac
     5101 ttgccgagcg ttttgaaatg ggagatggct caggattagt tgagacactt aaatcgtctg
     5161 ctttcgcagg ggcaaccgta agcgatgctc aaatgattgc actattggtt attgctaacc
     5221 aataccaatt aaacccttgg acaaaagaaa tttatgcatt ccccggtggg aacggtggat
     5281 taacgcctat tgtcggcgtt gatggttggg ttcgcattat taaccgtgag cctcaatatg
     5341 atggaatgga atttcatttt accgatgact attccgcctg tacttgtact atctaccgta
     5401 aagatagaag taaaccgatt gtggtgacgg aatttatggg ggaatgtaaa aagagctctc
     5461 cagcttggaa ctctcaccca aaaagaatgt tacgccataa agcaatgatc caatgtgcaa
     5521 gattagcctt tggctttacg ggtatttacg accaagacga agcagagcgt attgcggaaa
     5581 atgaaaaacc acctaaaaac atcacaccac aaaataacgt ggtagaaacc actgccgttg
     5641 aactcatttc ggaagaacaa ctgtcgcaaa tccggcagtt aatgcaagta accggtacgg
     5701 aggaggcgaa aattctcgcc tatattggcg ttcaagcact gaaccaaatc cctaaatcgc
     5761 aggcagaggc agtgattaaa aagctcaatc ttacgctaga caagcaaaac gctgaaaagg
     5821 cggataatgg cgaaagtgtc ggtgaggaaa tcccactatg acaggcgatt taatcatttt
     5881 agattgcgaa caaggatcag aagaatggct caatgccaga ttgggcattc ccaccgccac
     5941 aggcattgaa aatatcgtta cgccaagcgg taaaaaatcg tccgcttgga atagctatct
     6001 tgccgaactg gttgccgaaa gcattgaggg agcaaaagac ggttttaagt cgtctgatat
     6061 ggcacgaggc aacgagcttg aaccgcttgc acgaatggct tacgagtttg aaaccgacac
     6121 cgaagtcgtg caagtcggcg gtgtgtacct taacgccgaa aaacagttaa tggtaagtcc
     6181 tgacggctta attcccaatc taaaaaaagg gttggaaatc aaatgcccga aaatgaaaac
     6241 ccacatcaaa tacctgctag aaggcggtgt gccgaatgaa tatcttattc aagtgcaatc
     6301 tgccctttgg gtaacaggct acgaaacgtg ggactttgtc agctactgcc ccgaatacca
     6361 aaaacaaccg ctttacatct acacagccga acgtgatccg gtattgatga aagcctttga
     6421 tcaatatatc ccgcaattta tcaaatccct ttatgcattg aagggggtaa ccgccccgaa
     6481 aggggctttt taataggtag ccaatatgac aacccaaaag aaatacgaac tactccaaaa
     6541 cgacacaatc aaccacaacg gcagaacact ctaccgcatc aaagccatat gccactttag
     6601 gcggacggct gaatattccg caagagccac tcacgccaca gccgctgaat gctatggtgg
     6661 aattgcctgt acatcaacat aaccacaaac acggagaata aaatgaaacc atttgattta
     6721 aataaagcat tggcaggtga gccagtaaaa ctaagaaata atgataaggc atttgtaaaa
     6781 tacctaatta gtgatgacta tattagagat aataaagacc accaagtaca agggtataca
     6841 gttgatgaag aaaatgtatt tttgtcagaa gtatcgtggg ctgttagcgg atctcatttc
     6901 aatgatggaa caatagctca atatgatatt gttgg
//
LOCUS       DANLXD010000116         6755 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.117, whole genome shotgun sequence.
ACCESSION   DANLXD010000116 DANLXD010000000
VERSION     DANLXD010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6755
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.117"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            78..1055
                     /gene="manX"
                     /locus_tag="PXD18_002194"
     CDS             78..1055
                     /gene="manX"
                     /locus_tag="PXD18_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HDL6302580.1"
                     /translation="MSIAIIIATHGVAAEQLLKTTEMLIGEQEDVAYIDFVPGENAET
                     IMGKYQALVEGPLSHCDQVLFLVDMWGGSPFNAANRFQDGKSGMDVVAGVNIPMLVNT
                     CMARDDVESLEELVEVALEAGSTGIRSLNHQPEVAEVQTATPAQETAAVQQPEIVDDG
                     RRMTIALARIDDRLIHGQVATVWTKESKVNRIIVVNEGVAKDSVRTTMLKSVAPLGVT
                     AHVVDVPKMIRVYNNPEYADDRVMLLFTNPSDVLALIEGGVPLNSINVGGISHKEGKQ
                     MVSHSVAVDQNDIDAFKAIDAKGVELEVRKVSSDSRQYMMDLLKKHNLI"
     gene            1067..1867
                     /locus_tag="PXD18_002195"
     CDS             1067..1867
                     /locus_tag="PXD18_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005716709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HDL6302581.1"
                     /translation="MELSALQIVLLFLVACISGMGSILDEWQTHRPLIACTMIGLVLG
                     DVTTGVIVGGSLELLALGWMNIGAAVAPDAALASIVSTILVIVGRQDISTGIAIAIPL
                     AAAGQVLTYVVRAITVGFQHAADKSIEDGNLSRLDWLHRGALLLQAMRIAIPALIVAL
                     TAGTDAVQTMLNAIPEVVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFFAGFVIAG
                     FTDFNLVALGVLGTVIAMVYIHMHPKYNKSQQVVVAAAPKNDLDNRLD"
     gene            1881..2717
                     /locus_tag="PXD18_002196"
     CDS             1881..2717
                     /locus_tag="PXD18_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005564636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HDL6302582.1"
                     /translation="MTTEIKKVTKSDLNAVVRRSNLFQGSWNFERMQALGFAYAMVPV
                     IKRLYPDPNGPGRKEAIKRHSEFFNTQPFVGAPILGVTIAMEEERANGKEIDNAAING
                     IKVGLMGPLAGVGDPIFWGTVRPVFAALGAGLALKGELLGPILFFALFNIVRLAARYY
                     GVVYGYKKGLDVVQDMSGGLLQKLTEGASILGLFIMGALVQKWTSINVPLVLSTIQKQ
                     DGTIEVTTVQSILDSLMPGLLPLLLTFACMWLLRNRVNAIWIILGFFVIGILGAATGA
                     LA"
     gene            2810..3295
                     /locus_tag="PXD18_002197"
     CDS             2810..3295
                     /locus_tag="PXD18_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF986 domain-containing protein"
                     /protein_id="HDL6302583.1"
                     /translation="MTNTILILFILLGLVFAIYDQVFMHKLKGTTLLEIRLKKQKTID
                     TWLLIGLIVLSISYGVQNQIQPFTLYLLATCIILSVYLAFFRSPRLLLKQHGFFFANV
                     FFNYDKIYQVNIAEGKADEKILVIDLHSGRRLLAYVENAEDLQPVVDFFGGYKKESEQ
                     K"
     gene            complement(3381..4172)
                     /gene="tpiA"
                     /locus_tag="PXD18_002198"
     CDS             complement(3381..4172)
                     /gene="tpiA"
                     /locus_tag="PXD18_002198"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HDL6302584.1"
                     /translation="MARRPLVMGNWKLNGDKAFTKTLIADLKAELHGVEGCDVAIAPP
                     VMYLAHAEASLAGCGCGCSDKGLIALGSQNVDVNVKGAFTGDISPEMLKEFGAKYIII
                     GHSERRTYHKESDEFIAQKFKVLKDAGLVPVLCIGESEAENEAGKTEEVCARQIDAVI
                     NAHGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHKFIRDHIAAKSQAVADQVIIQY
                     GGSVNDANAAELFTQPDIDGALVGGVSLKAPAFAVIVKAAAAAKA"
     gene            4332..5246
                     /locus_tag="PXD18_002199"
     CDS             4332..5246
                     /locus_tag="PXD18_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HDL6302585.1"
                     /translation="MKLNYLYSPPQAVGRLKAEYADFIVREELGYELAGEGEFVAVKI
                     RKTNASTLFVGEKLAKFVGISEREMSYAGLKDRHNRKIRVGSLAGNHFELLLRDVAES
                     EELIYRLQQLQAVGFPNYFTEQRFGRDGHNLTQALRWANGEISVKDRKKRSFYLSAAR
                     SEVFNLVVSQRINDCLTQKILENDYVQLAGSNSFFCVKSDEIAETQARLAQQDLLLTA
                     PLIGERSLELECNPAEKAIIEQHAQLVALMQKERMAAARRAMLCKPQNLEWQFEQEGL
                     RLKFFLDSGSYATALVRELILLTEESEA"
     gene            5417..6205
                     /gene="surE"
                     /locus_tag="PXD18_002200"
     CDS             5417..6205
                     /gene="surE"
                     /locus_tag="PXD18_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HDL6302586.1"
                     /translation="MRILISNDDGFHAVGIQTLAKALRDAGHIVTIIAPDRNRSAASS
                     CLTLVDPLRVHRFDEYNYAVIAGTPADCVHLALNGLFDGKFAEKFDLVVSGINHGANL
                     GDDVVYSGTVAAALEGRHLPLPSIAVSLVGRKHSSFLDGENHFGTAAQVVLDLLEKME
                     TQRFPSNHVLNVNVPNLPYSELKGTMITRLGERSPAAEIVKQKDPRNADVYWIGVTGE
                     PLDESFGTDFYALNRDCVSITPIQVDMTAHKTIATLKGIFNETV"
     gene            6192..>6755
                     /locus_tag="PXD18_002201"
     CDS             6192..>6755
                     /locus_tag="PXD18_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDL6302587.1"
                     /translation="MKLFETIYDKTMQWSKHRFAAFWLSFVSFIEAIFFPIPPDVMLI
                     PMSMAKPQNAFKYAVYTTLASVAGGVIGYFIGLYATDWVQGVIANWGMQANFDKAKLW
                     FETWGVAVVFLAGFSPIPYKVFTICAGVMQMAFFPFVITAAISRFARFILVAKLSAWG
                     GKKYEQKIRRSIELIGWGTIVLAVVAYI"
BASE COUNT         1878 a         1359 c         1491 g         2027 t
ORIGIN      
        1 acattgtgtg aaataattat catattaaaa tctcgcccca gtaaataaac aacttaaaaa
       61 accgcaagga gtaacaaatg agcattgcta ttatcatagc aacccatggt gttgctgcag
      121 agcaacttct caaaacaact gagatgttga ttggtgaaca agaagatgtt gcttacattg
      181 actttgttcc cggcgaaaat gcagaaacga ttatgggcaa atatcaagca ttggttgaag
      241 gtccactatc acactgtgat caagtgctgt ttttggtgga tatgtgggga ggaagcccat
      301 tcaacgccgc aaaccgattc caagatggaa aatcgggtat ggatgttgtt gcgggtgtga
      361 atattcctat gttagtgaac acctgtatgg ctcgtgatga tgtggagtcg ttggaagaat
      421 tggtggaagt cgcattagaa gccggctcaa ccgggattcg ttcacttaat caccaacctg
      481 aagtggctga ggtgcaaacc gctactcctg cacaagaaac tgcagctgtt caacagcctg
      541 aaattgttga tgacggacgt cgtatgacca ttgcccttgc ccgtattgat gaccgcttga
      601 ttcacggtca agttgcgacg gtttggacaa aagaaagtaa agtcaatcgc attattgtgg
      661 taaacgaagg tgtagcaaaa gatagtgtac gaactactat gctaaaaagt gttgctcctc
      721 ttggcgtaac ggctcacgtt gttgatgtac ctaaaatgat tcgtgtctat aacaaccctg
      781 aatatgccga tgatcgtgta atgttactct ttaccaaccc aagtgatgtc ttagccttaa
      841 ttgaaggcgg tgtaccactc aatagcatta acgtgggcgg tatttcgcat aaagaaggga
      901 aacaaatggt tagccattct gtggcggttg atcaaaatga tattgatgcc ttcaaagcaa
      961 ttgatgcgaa aggcgttgaa ttagaagtac gcaaagtctc aagcgatagc cgtcagtata
     1021 tgatggattt attgaaaaaa cataacttaa tctaaaggaa attactatgg aactttcagc
     1081 attacaaatt gtgcttttat tcctcgttgc ctgtatctca ggtatgggct caattcttga
     1141 tgaatggcaa acccaccgtc cgttaattgc ctgtacgatg ataggcttag tgcttggtga
     1201 tgtgactacc ggcgttattg ttggtggctc attagagtta ttagctttag gttggatgaa
     1261 catcggtgcc gctgttgcac cagatgcggc attagcctct attgtctcaa ccattttagt
     1321 cattgtaggt cgtcaagata tttcaactgg tatcgccatc gctattccgc ttgcagctgc
     1381 cggtcaagta ttaacctatg ttgtgcgtgc aatcaccgta ggtttccaac acgcagcaga
     1441 taaatcaatt gaagacggta acttaagccg tttagactgg ttacatcgtg gtgctttatt
     1501 gcttcaagca atgcgtattg ccattccggc attaattgtg gcattaacag caggtacaga
     1561 tgcggttcaa acaatgttaa atgccattcc tgaagtggtt acaaccgggc tgaaaattgc
     1621 cggtggcttc atcgccgtgg tgggttatgc gatggtgatc aatatgatgc gtgcaggtca
     1681 tttaatgccg ttcttcttcg caggctttgt aattgcaggc tttaccgatt tcaatcttgt
     1741 tgcccttggg gtattaggta cggttattgc aatggtttat atccatatgc accctaaata
     1801 taacaaaagc caacaggtag tggtggcagc tgcaccaaaa aatgatttag acaaccgttt
     1861 agactaagag ggcatttaaa atgacaactg aaatcaaaaa agtaacaaaa agcgatttga
     1921 atgccgttgt acgtcgttca aacttattcc aaggttcgtg gaactttgag cgtatgcagg
     1981 ctcttggttt tgcgtatgcg atggtaccgg ttatcaaacg tttatatccg gatccaaatg
     2041 gcccgggtcg caaagaagca attaaacgcc attctgagtt ctttaacacc cagccattcg
     2101 tcggtgcacc gattttaggg gtaaccattg ctatggaaga agaacgtgcc aacggtaaag
     2161 aaatcgacaa tgccgcaatt aacggtatta aagttggttt aatgggacca ttagccggtg
     2221 tgggtgaccc aattttctgg ggaactgttc gccctgtatt tgccgcatta ggagcaggct
     2281 tagccttaaa aggtgagctt ttaggcccaa tcctgttttt cgccttattt aacatagtgc
     2341 gtttagccgc acgctattat ggcgtagtgt atggctataa aaaagggtta gatgttgtac
     2401 aagatatgag cggcggttta ttgcaaaaat taaccgaagg tgcttcaatc ttaggtctgt
     2461 ttattatggg ggcattggta caaaaatgga cgagcattaa cgttccgctt gtgctttcaa
     2521 ccattcaaaa acaagacggt accatcgaag ttaccacagt gcaaagcatt ctcgacagct
     2581 taatgccggg cctactccca ttattattaa cctttgcttg tatgtggtta cttcgtaatc
     2641 gagtaaatgc tatctggatt atcctcggtt tctttgttat cggtatcctc ggcgctgcaa
     2701 ccggtgcatt agcttaattg caaaattttc tgtgaaaacg accgcttgaa cttgaacatt
     2761 caagcggttt tttatacgct ttagcccaaa taaattcact tgcttaatta tgaccaatac
     2821 catccttatt ctctttattt tacttggctt agtattcgcc atttatgacc aagtttttat
     2881 gcacaaactc aaaggcacaa ccttactgga aatccgttta aaaaagcaaa aaacaattga
     2941 tacttggtta ttgattggtt taatcgtctt gtcaattagc tatggcgtac aaaatcaaat
     3001 ccagcctttt acactttacc tgctggcgac ttgcattatt ctgtcggtct atctcgcctt
     3061 tttccgttcc cctcgcttgt tgttaaaaca gcacggtttt ttctttgcga atgtcttttt
     3121 taattacgac aagatttatc aagtcaatat tgcagaagga aaagcagacg aaaaaatttt
     3181 ggtaattgat ttacatagcg gaagaaggct gcttgcctat gttgaaaatg cggaagatct
     3241 tcaaccggta gtggattttt ttggcggtta taaaaaggaa agtgagcaga aatagtttgc
     3301 gaacaaaaca caagcggtca tttttccctg aaattttgca aaaaactgag gaaaaatgac
     3361 cgcttgtaaa atcggttaaa ttaggcttta gcagccgctg ccgctttaac gatcaccgca
     3421 aaagcaggcg ctttaagtga aacaccgcct actaatgcac cgtcaatatc cggttgagtg
     3481 aataactctg ctgcattggc atcgtttaca gagccaccgt attgaatgat cacttggtca
     3541 gccactgctt gcgatttagc tgcaatatgg tcacgaataa atttatgcac tgcttgtgct
     3601 tgtgccggag tcgctgattt gccggtaccg attgcccaaa ttggttcgta agcaataact
     3661 gcaccgttga atgcttccac accgtgcgcg ttgatgaccg catcaatttg tcttgcacac
     3721 acttcttcag ttttacctgc ttcattttcg gcttcagatt caccgataca taatacaggc
     3781 actaagccgg catcttttaa tactttgaat ttttgagcaa taaattcatc gctttctttg
     3841 tggtaagtac ggcgttctga atgcccgata ataatatatt ttgccccaaa ctcttttaac
     3901 atttcaggtg aaatatcacc ggtgaatgcc ccttttacgt tcacatcaac gttttgtgaa
     3961 ccaagtgcga ttaagccttt atcactgcaa ccacagccac aaccggcaag tgatgcttca
     4021 gcgtgtgcca aatacatcac cggtggagcg attgctacat cacagccttc aacgccatgt
     4081 aattctgctt ttaaatctgc aattaaggtt ttagtaaacg ctttatcacc gtttaatttc
     4141 cagttaccca ttacaagtgg acgacgtgcc attttgtttc tcctatatga agttgaactt
     4201 aaatataaac gttgcaaact ataccaaatt ttaatgtcgt tttgttgttt ttattttgct
     4261 ttttctgatc tagatcgaaa ggtttaacgt ataatgccga aatcttattt tttatgttat
     4321 tcgagaagtg aatgaaactg aattatttat actctcctcc tcaagctgtt gggcgactaa
     4381 aagccgaata tgcagacttt attgtgcgtg aagaactggg ctacgaacta gccggcgaag
     4441 gggaatttgt ggcggttaaa atccgcaaaa ccaacgccag cacgctgttt gtgggggaaa
     4501 agttagccaa atttgtcggt atttccgagc gtgaaatgag ttatgcaggc ttaaaggacc
     4561 gccacaaccg caaaattcgt gttggttcgc tcgccggcaa tcattttgaa ttattgctac
     4621 gtgatgtagc agaaagcgaa gagttgattt accgtttgca acagttgcaa gcggtcggat
     4681 ttcccaatta ttttaccgaa caacgtttcg ggcgagacgg acataacctg actcaagcct
     4741 tgcgttgggc aaacggggaa attagcgtga aagatcgcaa aaaacgcagt ttctaccttt
     4801 ccgctgcccg ctcggaagtg tttaatttag tggtttcaca gcggattaat gactgcttaa
     4861 cccaaaaaat cttggagaat gattacgttc aacttgccgg ctctaacagc tttttctgcg
     4921 tgaaatcgga cgaaattgct gaaactcaag cccgtttagc acagcaagat ctacttctca
     4981 ccgctccgct gataggcgaa agatcgcttg aattagaatg caatcctgct gaaaaagcca
     5041 tcatagagca acacgctcaa ttggttgcct taatgcaaaa agagcgtatg gcagccgctc
     5101 ggcgagcaat gctttgtaag ccacaaaatc tggaatggca atttgaacaa gaagggctac
     5161 ggttaaaatt ctttttagat tcaggcagtt atgccactgc actggtgcga gagttaattc
     5221 tgcttaccga agagagcgaa gcttagtcca taacacataa caagcggtaa gattttaatc
     5281 attttttgca atttgcaaaa ctttaacaaa atcttaccgc tttttgcact tttagactaa
     5341 aaaaactgtc gaaaaattgt tagaattgcg atctttgtat ttagagtcta tcaagatgta
     5401 agatctaaag gaaattatgc gaattttaat tagtaatgac gatggttttc acgctgtcgg
     5461 cattcaaact ttagccaaag ccttgcgaga tgcaggccat atcgtcacca ttattgcacc
     5521 ggatcgtaac cgcagtgcag cttcaagctg cctaacctta gtagatccac ttcgggtgca
     5581 tcgttttgat gaatataatt atgcggtgat cgccggcaca cctgccgatt gcgtgcattt
     5641 agccttaaac ggcttgtttg acggcaaatt tgcagaaaaa tttgatttgg tggtctccgg
     5701 cattaatcac ggggcaaatt taggcgatga tgtggtttac tccggtacgg tagcggcagc
     5761 attggaaggc cgccacttgc cattaccaag tattgcagta tcactggttg ggcgtaaaca
     5821 ctcttcgttt ttagacggtg aaaatcattt tggaacggca gcacaggtag tgttagattt
     5881 attggaaaaa atggaaacgc aacgttttcc atcaaaccac gttctcaatg ttaatgtgcc
     5941 gaatttacct tattcagagc taaaaggcac aatgatcacc cgcttaggtg aacgttcacc
     6001 cgctgcggaa attgtgaagc aaaaagatcc tcgtaatgct gatgtctatt ggattggtgt
     6061 aacaggtgaa ccactggatg aaagttttgg tactgatttt tatgcattaa accgagattg
     6121 cgtttctatc acaccaattc aagtggatat gaccgctcat aaaacgatag caaccttaaa
     6181 aggcattttt aatgaaactg tttgaaacaa tttatgacaa aacaatgcag tggtctaagc
     6241 accgcttcgc tgccttttgg ttgagttttg tcagttttat cgaggcgatc tttttcccga
     6301 ttccgccgga tgtgatgttg attccgatgt cgatggcaaa accgcaaaat gcgtttaaat
     6361 atgcagttta cactaccctt gcttcggttg ccggtggtgt tattggttat tttattggct
     6421 tatatgctac cgattgggtg caaggcgtca tcgcaaattg gggaatgcaa gcaaactttg
     6481 ataaagcaaa attgtggttt gaaacttggg gtgtcgcggt agtattttta gccggttttt
     6541 cgccgattcc ctataaggta tttaccatct gtgccggtgt aatgcagatg gcgttcttcc
     6601 cgtttgtgat tactgctgcg atttctcgct ttgcccgttt tattttggta gcaaaactct
     6661 ctgcttgggg tggcaaaaaa tatgaacaaa aaattcgccg ctcaattgaa ttaattggtt
     6721 ggggaacaat cgttttagcc gttgttgcct atata
//
LOCUS       DANLXD010000117         6641 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.118, whole genome shotgun sequence.
ACCESSION   DANLXD010000117 DANLXD010000000
VERSION     DANLXD010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6641)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6641)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6641
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.118"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..1995
                     /locus_tag="PXD18_002202"
     CDS             <1..1995
                     /locus_tag="PXD18_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL6302588.1"
                     /translation="EIEQTRAAYDRLKRSGVASQNELRRASEATKQRVRELNAELGKT
                     SFGDKAGSFGRGLMGAGVGIAAGAAMARQPARNQMEFDRQLAMVANTAFSDRDVKGRI
                     DGKRELLDAVQKAVSVGGGSKEEALSSLDALLASGAVSTETALNLLPTLQKGAVATGA
                     SANDMAQIAISSMQQFGIKEEDIGRVLDMAVAAGQAGSFELADMASWLPQQMAAAKQA
                     GLSGIEGFERLLIANQQARVTAGTSNEAGNNLVNLLGKITAKETNERFKNIEYKDPKT
                     GKTKAIDFAKSMEHYKGKGQDSLQAFMSIMDDVVGSDKRYQELQAKLKTAKGEEQKRL
                     FNELTNLVEGTAIGEIISDRQALMALLGIKNNVQLGEKVQKDIQNSEGAVETSHAVIR
                     DTNAHKVESLKNTTEFAQMKNFEKVNGVLGTLAELLNKYANEYPNLTQFLSGATDAVK
                     IFGAALAASSVLDLLTGKKDKGGLIGDVLDKSSKASGGKGKVGKLLSVGGSFASVAGV
                     ATMLHGDQAPMSEERKAELRDPNYQARKMYEYKKEILGSRFHSFFRSNETLEQYRKDV
                     SAYEAKQKNSNTMGAVQGVLSTIPSLQELRPKVDSVTQTLSTYQADFQAFGATISAGI
                     EAGLASQSHTIANQITVELDGSVVAEKVAEYQFNFNKRMA"
     gene            1995..3287
                     /locus_tag="PXD18_002203"
     CDS             1995..3287
                     /locus_tag="PXD18_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA circularization protein"
                     /protein_id="HDL6302589.1"
                     /translation="MSGWTMPIQQASFKGVRFDVLAVDDSFERAVVEHAYPFVNGADL
                     EDMGLNTQTIRLQAVFFGSSYYTDYIRLLSVLQQKGADVLVHPIRGRLPNMLLVSANL
                     HTDAENINYVALDLTFKEATEMQPIFAFEDSLISKIDKLLLDLENLFDDGLRFWDSVG
                     VFDLKSRLLGLWGALFASFEAVRNLFDLDKKKYSIASSTSQRTYLRDGSGALNQLKEM
                     VDSGIQGRADLTTLSFKSQLLNITDAIDNTQAIVSKVARDEGFNRSKTVKLLGSDVVE
                     LGIMLDLIATTKLTKVLTELVEEREEELLIGDLELINQIVREHWLNIINKLREQQKNT
                     QKGVPSDKTKVIYETAEKLINNIRNVAHQFTALVLAVINKKPPLTVRMVMDSGTIHKV
                     AHAFYGDYERADELLRLNPHIRQPNFIERGTLLNCYWE"
     gene            3290..4417
                     /locus_tag="PXD18_002204"
     CDS             3290..4417
                     /locus_tag="PXD18_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6302590.1"
                     /translation="MENEIVVEIDGSQHKNWKSYDIDSDFLIPADSFNFELGKSSNIE
                     VLPNYSGKTAIVKINGKTVLTGIVDTTHHTISKSGRGFSLNGRDKAAILVDCSAPITN
                     VQGLSLLDAVKKIVTPLGIKEVQLKAEKNPTLSKVDIDVGESAWEAIMRCANSAGLHC
                     WFDPKGVLIVGGADYAQPPVATLYCVKESGDSRKNNFVDATLSYDVSQSYSEVTFLAQ
                     KHGKDSDNAKHDFKWVYKNEEMELYKPKTIVLGDVENLEALMKQAKKQVSDWQLESFN
                     LTIIVPDHKTKDGTLWQAGQRVHVVCEEYDLDGIFFLMGRRFRLSRTGGTTTELRLKL
                     DGVWTPDAYQAKAQEARKRKGKKGRKKKEPVEYVGSWELGK"
     gene            4419..5081
                     /locus_tag="PXD18_002205"
     CDS             4419..5081
                     /locus_tag="PXD18_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDL6302591.1"
                     /translation="MMRKLAKQTKEVAKGVQDSVRAAFRGVLNLVKSGSDIQQVQVSA
                     LADETIQDLELMQHFGFTSVPPAGTQAVVIPLGGKTTHGIIVATENGSFRVKNLKNGE
                     TAIYDSSGSTIILKNGRVIDIECDSFNIKCKQYSVTASGGANFNTPKLETDQQFVSQG
                     QISGNGGMVVQGGSGASFTGSLTQQGGSISTDGDVVASGKSLVTHQHNEQGDGRPTSA
                     PI"
     gene            5200..5550
                     /locus_tag="PXD18_002206"
     CDS             5200..5550
                     /locus_tag="PXD18_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage GP46 family protein"
                     /protein_id="HDL6302592.1"
                     /translation="MDREISPLTRDYTSENITTLQNAVYIRLTTPKGSWWADGRVGSL
                     LHLIQREKDLSRVGLLAQQYAEEALQPIIDDGRAKSITVTHEQPKDGSLNLLISVIDN
                     RGVKFEFKHPVKLV"
     gene            5563..6624
                     /locus_tag="PXD18_002207"
     CDS             5563..6624
                     /locus_tag="PXD18_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HDL6302593.1"
                     /translation="MYQIPTLEDVRREILRDIQSLEPTADIEVDSDYFVRASALASCV
                     VGLYAHQNWIVRQYFPDTADSEYLEMHAKLRNLYRKNATYASGSLKVFGTAGSVINEG
                     LQVKFGERFYVTKSSDVIGDDGSATVRVISMATGASSNVKSESKAQLTAAPAGVSSDC
                     LLLPDVTGGTEVESDAALLARLLEQIRRPPSGGNKNDFRQWAESVDGVTSAFVYPLRR
                     GEGTVDIAITSGDTVPSDEIVRATQAYIDEVRPVTAKSVYVLKPVEKRVNFNIKVQLD
                     TDTTLDGVKAEIENALENYFLSLKPADTLIISQIEAVISDLVGVVDREIVQPTRNQTI
                     DAYREMGWFRLGDVTVELM"
BASE COUNT         1955 a         1228 c         1680 g         1778 t
ORIGIN      
        1 gaaattgaac aaactcgtgc agcctatgac cgcttaaaac gctcaggtgt tgcctcgcaa
       61 aatgagctac gccgtgcctc agaagcgact aagcaacgag tccgagagtt aaatgctgaa
      121 ttgggtaaaa ccagttttgg ggataaggca ggaagttttg ggcgtgggtt gatgggtgca
      181 ggggttggaa ttgctgcagg tgcagcaatg gctcgccagc ctgcaagaaa tcaaatggaa
      241 tttgatagac agcttgcaat ggtagcgaat accgcctttt cagatcgtga tgtgaaaggg
      301 cgtattgatg ggaaaagaga gttacttgat gccgtacaga aagcagtaag tgtaggcggt
      361 ggctcaaaag aagaagcgtt gagctcacta gacgctttac ttgcctcagg tgctgtttct
      421 accgaaaccg ctctcaattt actcccaacg ttgcagaaag gtgcggtcgc aacaggggca
      481 agtgcaaatg atatggctca aattgctatt tcctcaatgc aacaatttgg gattaaagaa
      541 gaggatattg gtcgagtctt agatatggca gttgccgctg ggcaagccgg tagctttgag
      601 cttgcagata tggcaagttg gttgcctcaa caaatggccg ctgcaaaaca agctggctta
      661 agcggcattg agggatttga gcgactttta attgcaaacc aacaggctcg tgtcactgcc
      721 ggtacaagta acgaggctgg taataattta gtgaatctgt tgggtaagat tactgctaaa
      781 gaaactaatg agcgttttaa gaatattgaa tataaagatc cgaaaactgg caaaaccaaa
      841 gcgattgatt ttgcaaaatc tatggagcat tacaagggaa aagggcaaga ttcattgcag
      901 gcttttatgt ctattatgga tgacgttgtc gggagtgata aacgctatca agaactacaa
      961 gctaaactta aaactgctaa aggcgaagag cagaaacgct tattcaatga attaacaaac
     1021 ttagttgaag gtacggcaat tggagaaatt atttctgatc gccaagcatt aatggctcta
     1081 ttagggataa agaataatgt tcaattaggt gaaaaagtac agaaagatat tcagaatagt
     1141 gaaggagctg ttgaaacctc tcacgctgtt attcgggata ctaatgctca taaagttgaa
     1201 tcattaaaaa atacaactga atttgcacaa atgaaaaact ttgaaaaagt aaatggagtg
     1261 ttaggcacat tagctgaatt actgaataaa tacgccaatg aataccctaa cttaactcaa
     1321 tttttaagtg gtgcaacaga tgccgttaaa atttttggag cagctcttgc tgcatcaagt
     1381 gtgcttgatt tattaaccgg taaaaaagac aagggcggac taattggtga tgttttggat
     1441 aaatcatcaa aagctagtgg aggtaaaggt aaggtaggta aattgctttc ggttggtggc
     1501 tcttttgcta gtgttgcagg cgttgccaca atgctacacg gcgaccaagc cccgatgagt
     1561 gaggagcgaa aagcagagtt aagagatcct aattatcaag ctcgtaaaat gtacgagtac
     1621 aaaaaagaga ttttaggtag ccgtttccac tcgttttttc gtagtaatga aacccttgag
     1681 caatatcgga aagatgtgag tgcttatgag gctaagcaaa agaatagcaa tactatggga
     1741 gctgtacaag gggttttaag taccattccg agcttacaag agttacgccc taaagttgat
     1801 tcggttactc aaaccctatc cacctatcaa gccgactttc aggcttttgg ggcaacgatt
     1861 tcagccggta ttgaggcagg gcttgcctcg caatctcata cgattgcaaa tcaaatcacc
     1921 gtggagctgg acggttcggt ggtggctgaa aaagtggctg aatatcagtt taattttaac
     1981 aagaggatgg cgtaatgagc ggttggacaa tgcctattca acaggcgagt tttaaaggtg
     2041 tgcgttttga cgtgcttgca gtggatgata gctttgagcg agcggtagtt gaacacgcct
     2101 acccttttgt aaatggggct gatttagagg atatggggct aaacacccaa actattcggc
     2161 tgcaagcggt cttttttggc tcaagctatt acacggacta tatccgctta ctttcagttt
     2221 tgcagcaaaa aggggctgat gtattagtcc accctattcg tgggcgttta ccgaatatgt
     2281 tactcgtttc ggcgaatcta cataccgatg ccgaaaatat caattatgtt gccttagatt
     2341 tgacctttaa agaggcaacc gaaatgcagc cgatttttgc ctttgaagat tcgctgattt
     2401 cgaaaatcga caagctgcta cttgatctcg aaaacctgtt tgatgatggc ttgcgttttt
     2461 gggatagcgt tggggtgttt gatctgaaat ctcgtttgct tgggctttgg ggggcgttgt
     2521 ttgcctcgtt tgaggcggtg cgtaacctgt ttgacttgga caagaaaaaa tacagcattg
     2581 cctcatcaac ctcacaacgc acctatttaa gagacggttc gggggcattg aatcagttaa
     2641 aagaaatggt ggatagcggt attcaggggc gtgctgattt aacgacactc tcgtttaaat
     2701 ctcagttact caatattact gatgcgatag ataacactca ggcgattgtg agcaaagtgg
     2761 ctagagatga gggttttaac cgctcaaaaa cggttaagtt acttggctct gatgtggttg
     2821 agcttggcat tatgcttgac cttattgcca cgactaagct caccaaagtc ttgactgagc
     2881 tggtagaaga gcgtgaggaa gagctgctaa ttggtgattt agagttaatt aaccaaattg
     2941 tgcgtgagca ttggctgaat attatcaaca aactgcgtga gcaacagaag aacactcaaa
     3001 aaggcgtgcc gagtgataag acaaaagtta tctacgagac cgcagaaaag ctgatcaaca
     3061 atatccgtaa tgttgcccat cagtttactg cacttgtgct tgcggtaatt aataaaaaac
     3121 cgcctttgac cgtgcgaatg gtaatggata gcggcacaat ccataaagta gctcacgcct
     3181 tttatgggga ttatgagcga gcggatgagc tattacgtct taatccgcat attcgccagc
     3241 caaactttat tgagcgaggc acgctgttaa attgttattg ggagtaaaaa tggaaaatga
     3301 aattgtggtg gagattgacg gctcgcagca taaaaactgg aaaagttatg atattgacag
     3361 cgatttttta attcctgctg atagttttaa ttttgagttg ggtaaatcta gcaatataga
     3421 ggttttacct aattattcgg gcaaaacggc aatagttaaa atcaatggca aaacggtgct
     3481 cactggcatt gtggatacca cacatcacac cattagcaaa agcgggcgtg ggtttagcct
     3541 aaatggacgt gataaagccg ctattttggt ggattgctct gccccgatta ccaatgtgca
     3601 agggctctct ttgcttgatg ctgttaaaaa aattgtaacc cctcttggga ttaaagaggt
     3661 gcaactgaaa gccgagaaaa acccgacttt aagcaaggtg gatattgatg tgggtgaatc
     3721 ggcgtgggag gcgattatgc ggtgtgccaa ctcggcaggt ttgcattgtt ggtttgaccc
     3781 caaaggcgtg ttaattgtcg gcggtgcgga ttacgctcaa ccgcccgttg ccacgttata
     3841 ttgcgtgaaa gagtcggggg atagccgtaa aaataacttt gttgatgcaa cactttctta
     3901 tgatgtgtcg caaagctatt cggaggtcac ttttcttgct caaaaacacg gcaaagattc
     3961 tgataatgcc aagcacgatt ttaaatgggt gtataaaaat gaggaaatgg agctttataa
     4021 accgaaaact atcgtgctgg gcgatgtgga gaacctcgaa gccttgatga aacaggcgaa
     4081 aaaacaggta tcagattggc agttggagtc atttaacctc acgattattg tacctgacca
     4141 taaaaccaaa gacggcacgt tgtggcaagc tgggcaacgt gtgcacgtgg tatgtgagga
     4201 gtatgattta gatggtattt tctttttaat ggggcgacgt tttcgactct ctcgcacggg
     4261 tggcacaacc accgaattgc ggttaaaact ggatggcgtg tggacacctg atgcttatca
     4321 agctaaagca caagaggctc gcaagcgtaa aggcaaaaaa ggacgtaaga aaaaagagcc
     4381 tgtagaatat gtaggctcgt gggagttggg aaaataatat gatgagaaaa ttagcaaaac
     4441 agactaaaga ggtggcaaaa ggtgtgcaag atagcgtgcg tgctgctttt agaggggtat
     4501 taaatttagt caagagtggc agtgatattc agcaggtaca ggtgtccgct ttagcggacg
     4561 aaactatcca agatttagag ctaatgcagc attttggttt cacttccgtg ccacctgccg
     4621 gcacgcaagc ggttgttatc cccttaggtg gtaaaaccac gcacggtatt attgtggcga
     4681 ctgaaaacgg ctcgtttagg gttaaaaatc taaaaaatgg tgagacggct atttatgatt
     4741 caagcggctc aactatcata ttaaaaaacg ggcgagtgat tgatattgag tgcgatagct
     4801 ttaacattaa atgcaagcaa tattccgtca ccgcaagcgg tggagcaaat tttaacaccc
     4861 cgaaactaga aaccgaccag cagtttgtgt ctcaagggca gatcagcggc aacggtggaa
     4921 tggtagttca aggcggaagt ggtgcaagtt tcactggctc attaacacaa caaggaggca
     4981 gtatctcaac tgatggtgat gtggtggcat cgggtaaatc actggttaca catcaacaca
     5041 acgaacaagg cgatggcaga cctacctctg ctccaattta acttacaagc taatttacaa
     5101 gcggtctaat tttgcaaatt ttttgtagaa aaagaccgct tgccatttgt ggaagtctct
     5161 ccccgttact cctgtcttta atgtctctac catagcaata tggacagaga aatcagcccg
     5221 ctcactcggg actatacaag tgaaaatata actacactgc aaaatgccgt gtatatcaga
     5281 ctaactactc cgaaaggctc gtggtgggca gatgggcgtg taggttctct gctccatctt
     5341 attcaacgtg agaaagattt aagccgtgtg gggctattag ctcaacagta cgccgaagag
     5401 gctttgcagc cgattattga tgacggacga gccaaaagca ttacggtgac acacgagcag
     5461 ccaaaagacg gctcgttaaa tcttttaatc tccgttattg ataatcgtgg ggttaaattt
     5521 gagtttaaac accctgtaaa actggtttag gtggttttta aaatgtatca aatcccaacg
     5581 cttgaagatg ttagaagaga aattctgcga gatattcaat ctttagagcc aactgctgat
     5641 attgaggtgg attcggatta ttttgttcgt gcctccgctt tggcaagctg tgtggtgggg
     5701 ctgtatgctc accaaaactg gattgttcgt cagtatttcc cagatacggc agactccgaa
     5761 tacctcgaaa tgcacgctaa attgcgaaat ctttaccgta aaaatgcgac ctatgcgagt
     5821 ggttcgttga aagtttttgg tactgctggc tcagtaatca atgagggctt gcaagttaaa
     5881 tttggcgagc gtttttatgt aaccaaaagc tcggacgtta ttggtgatga tggctctgca
     5941 acggtgcgag tgatttcaat ggcaacaggg gcatcaagca atgttaaatc tgaaagtaaa
     6001 gcacaactga ctgctgctcc tgctggcgta tcaagcgatt gcttgttatt gcctgatgtg
     6061 acaggcggga cggaagtgga aagcgatgcg gcattgctgg ctcggttatt agagcagatt
     6121 cgccgaccac cgtcaggcgg gaataaaaat gacttccgcc aatgggcaga aagcgttgat
     6181 ggcgtaacct ctgcgtttgt ttatccatta cggcgtggcg agggtacggt agatattgca
     6241 atcacctcag gtgataccgt gccaagtgat gaaatcgtgc gagcaactca agcttatatt
     6301 gatgaagtcc gccctgttac ggctaaatcg gtttatgtac ttaagccagt tgaaaaacgg
     6361 gtcaatttta acatcaaagt gcaacttgat acggatacga cgcttgatgg tgtaaaagcg
     6421 gaaatcgaaa acgctttaga gaattatttt ttatcactca aacctgctga caccttaatt
     6481 atttcgcaaa ttgaggcagt aattagtgat ttagtgggcg tagtagatcg tgagattgta
     6541 cagccaacca gaaaccaaac gattgatgcc taccgtgaaa tgggctggtt cagattgggt
     6601 gatgtaactg tggagttgat gtgatggtaa cgattaactc t
//
LOCUS       DANLXD010000118         6630 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.119, whole genome shotgun sequence.
ACCESSION   DANLXD010000118 DANLXD010000000
VERSION     DANLXD010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6630
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.119"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(71..1762)
                     /gene="dld"
                     /locus_tag="PXD18_002208"
     CDS             complement(71..1762)
                     /gene="dld"
                     /locus_tag="PXD18_002208"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HDL6302594.1"
                     /translation="MSNNSLISQLTEIVGQSYIITDPTKTEAYRSGYRFGTGSAIAVV
                     KPTTLLEYWNVLKACVAADVIVISQAANTGLTGGSTPSGNDYDRDIVIINTMRMNGIQ
                     LINNANQVVCLPGSTLNELELLLKTHGREPHSVIGSSCIGASVIGGICNNSGGALVQR
                     GPAYTEMALFAQLNEDGTLELKNHLGIDLGDTPEEILENLQAQRYQRKDIQQACGKGH
                     DHAYCNHVRQIDEDSPARFNADPARHYEAAGSAGKLAVFAVRLDTFPLEKDTAVFYIG
                     TNHTDTLNDIRRYMLANFEVLPISGEYIHRDAFDIAADYGKDTFWVIKKLGTHRLPQL
                     FSLKAKVDRMAKKLTFLPANLSDKILQAISKMLPQHLPESLRDYRNQYEHHLIIKMGG
                     KGVQEARDYLARYFADTQKGGYLECNPTESQAAMLHRFAVASAAIRYRAIHDKEVEDI
                     VALDIALRRNDKAWFEVLPPEIESQITHKLYYGHFMCHVFHQDYIVKKGVDCLALEHQ
                     MLELLDKRGAQYPAEHNVGHLYEAKPTLRKFYRQLDPTNSFNPGIGQTSKKKYWK"
     gene            complement(1974..3071)
                     /locus_tag="PXD18_002209"
     CDS             complement(1974..3071)
                     /locus_tag="PXD18_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HDL6302595.1"
                     /translation="MFYSSNPLIKHKTGLLNLAEELGNISQACKVMGMSRDTFYRYQQ
                     AVEQGGVEALLNQNRRVPNIKNRVDESTEKAVVQFALDNPAFGQVRVSNELRKQGIFV
                     SAGGFCLCRWFLSLQVVFVSAGGVRSIWLRHHLANFKQRLTALEKLVAEQGIILSEPQ
                     IQALERKKEDEIACGEIETAHPGYLGSQDTFYVGNIKGVGRIYQQTFIDTYSKVAFAK
                     LYTMKTAITAADMLNDKVLPFFESQRLPMLRVLTDRGSEYCGKVENHDYELYLAINDI
                     EHTKTKVKQPQTNGICERFHKTILQEFYQVAFRKRIYMDLEALQADLDEWLMYYNHHR
                     THQGKMCCGRTPMETLVDGKRIWAEKNLSSN"
     gene            3401..4117
                     /locus_tag="PXD18_002210"
     CDS             3401..4117
                     /locus_tag="PXD18_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3800 domain-containing protein"
                     /protein_id="HDL6302596.1"
                     /translation="MYLMYVDESGSTTDPTQKYFVLSGIAVFERNTHWIEKKMNVIAS
                     QFCQYSEGSDPYFYELHGSPMRSGKSEWRGIPMSERINAIQDCLKLVQSNNIRIFAAV
                     IEQGYSSGQDTITECFEQISSRFDMYLSRLHAQGNTQRGISIFDKSSTEKSIQALART
                     FKNSGHTYGKLRNFSEVPLFLDSKSSRLIQLADLVSYAIFRHYEHNDSSFYDIIRNNF
                     DYHNGRIHGLYLRNKEDIIS"
     gene            complement(4160..5078)
                     /locus_tag="PXD18_002211"
                     /pseudo
     CDS             complement(4160..5078)
                     /locus_tag="PXD18_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005700778.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
     gene            complement(5080..>6630)
                     /locus_tag="PXD18_002212"
     CDS             complement(5080..>6630)
                     /locus_tag="PXD18_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase/relaxase domain-containing protein"
                     /protein_id="HDL6302597.1"
                     /translation="VHDIGKVVVDIEITLKDGSRWFAWNGLPPQPYKFKYIKGRDYHL
                     HPVLGGFLANQLIPKSAFDWLGQYPEVISSLMYAMSGHNDKAGLLSEIVQKADQHSVT
                     LALGGDVNKLVQRPVNSLSKQLVLALRYLLEQKIKLNTPKGPADGWFTEEGLWLVSKT
                     AADNIRAYLLGQGISVPKDNPKLFDEMQSLGIVEESPAGGAIWSCRIQADSGWTPANT
                     FTLLRIKPEVAWENINDRPNYFAGKVKIVEQITEESNIETQSTLVDGTTKPAPLPSVQ
                     TGGIIASKEVEISQVETNSDNAPSSEIIINDENDLTSFVLDMFAPTESSEPSLDDISI
                     GKGQEIASMPSKQEVQDKSTTKKLKVTQSAVETPETLTLSELQLQNKENSITGDNFVK
                     WLKSGIATNKFAINKPTAKLHIVEDHLFLVTPVIFEMYLQETGQPYDKETINNLQYDF
                     QGLGIHSPKNTMTNGKPDTINFWKCDVIGPRKTSSLTGYLIKNTRLFFGDKVLLNNHC
                     LTLQKEET"
BASE COUNT         1910 a         1346 c         1246 g         2128 t
ORIGIN      
        1 agcaactgtt ttgtccactt ggcatagttt ttgacggatc agcaactatt ttgtctacta
       61 tgcctttttg ttacttccag tattttttct tcgaggtttg cccgatcccc ggattaaagc
      121 tgttggttgg atcaagctgc cggtagaatt tgcgtaaggt cggttttgct tcgtaaagat
      181 gaccgacatt atgctccgca gggtattgtg ccccacgttt atccagtaat tctaacatct
      241 gatgttccaa cgccaaacaa tctacacctt ttttcacaat atagtcttga tggaaaacat
      301 ggcacataaa atgcccataa taaagtttgt gcgtgatttg actctctatt tccggcggta
      361 gcacttcaaa ccacgcttta tcatttcggc gaagggcaat atctaaagca acaatatctt
      421 ccacctcttt atcgtgaatg gctcgatagc gaatcgctgc cgaagcaacg gcaaaacgat
      481 gtaacattgc cgcttggctt tcagtcggat tacactccaa ataaccgcct ttttgtgtat
      541 cagcaaaata acgggcaaga tagtctcttg cttcttgaac gccttttcca cccattttga
      601 taattaagtg atgttcatac tggttacggt agtctcgaag actttccggc aaatgttgcg
      661 gtaacatttt tgagattgcc tgtaatattt tatcactgag atttgccggt aaaaaggtga
      721 gtttcttcgc cattctgtcc acttttgctt taagtgaaaa gagttgtggt aagcggtgtg
      781 taccgagttt tttaatcacc caaaaagtat ctttaccgta atcagcggca atatcaaagg
      841 catcacgatg aatatattca ccggaaatcg gcaatacctc aaagttggct aacatatagc
      901 gacgaatatc gtttaatgtg tccgtatgat ttgtcccgat ataaaaaaca gccgtgtctt
      961 tttcaagcgg aaaggtatct aatcgcaccg caaacaccgc taactttcct gcactaccgg
     1021 cagcctcgta gtggcgggca ggatcggcat taaaacgggc aggggagtct tcatcaattt
     1081 ggcggacgtg attacaatag gcgtgatcgt gtccttttcc gcacgcttgc tgaatatcct
     1141 tacgctgata acgttgggct tgcagatttt ctaaaatttc ttccggcgta tcacctaaat
     1201 caatacctaa atggtttttt aattccagcg tgccgtcttc atttaactgg gcaaacagtg
     1261 ccatttcagt ataagccggc ccacgttgca ctaatgcacc ccctgaatta ttacaaatac
     1321 caccgataac cgaagccccg atacaggacg atccgatcac cgaatgcggt tcacgtccgt
     1381 gcgttttcag caacaattcc agctcattta atgtcgagcc cggtaagcaa acgacttgat
     1441 tggcattgtt aattaactga atgccgttca ttcgcattgt gttaatgatc acaatatccc
     1501 gatcataatc gttgccgctt ggtgttgaac caccggttaa tccggtattg gccgcttgtg
     1561 agataacaat gacatcggcg gcgacacagg cttttaatac gttccagtat tctaataacg
     1621 ttgtaggttt taccactgca atcgcactac ccgtgccaaa gcgatacccg ctacgatagg
     1681 cttccgtctt agtcgggtca gtgatgatat aagactgccc gacaatttca gtaagctgag
     1741 aaatcagtga attatttgac attatgcttc cctcaaaggt agaaatagat agggcagtat
     1801 agcaataaac aaaagagagc aaagcagaat gttacaaaat tgtgaactac tgcacagaat
     1861 aaatgaagaa atgaagtaaa agaaagcgag ctaaaagagc gtcgcccgct ttatttgtag
     1921 aaaatcaaac ctaatctgac agtcccccgt ttaaaattac cgtgtctgtc agattaattt
     1981 gagcttaaat tcttttctgc ccaaatgcgt tttccatcaa ctaatgtctc catcggtgtt
     2041 cttccacagc acatttttcc ttgatgggtt cgatgatggt tataatacat taaccattca
     2101 tctaagtcag cttgcaatgc ctctaaatcc atataaatcc gttttctgaa tgccacttgg
     2161 tagaactcct gcaaaatcgt tttgtgaaaa cgctcacaga tgccgtttgt ttgtggctgt
     2221 ttcactttgg tttttgtgtg ctctatgtca ttgatagcca aataaagctc ataatcgtga
     2281 ttctcaactt tcccacaata ctcactgcct cggtctgtca gcactcgtaa cataggtaac
     2341 ctctggcttt caaagaatgg taatactttg tcatttagca tatcagcagc agtgatagcc
     2401 gtcttcattg tatacagttt tgcaaatgcc actttactat aagtatcaat aaacgtttgc
     2461 tgataaatac gacccacacc tttaatattg ccgacataaa aggtatcttg tgaccctaaa
     2521 tagccggggt gtgccgtttc aatttcacca caggcaatct catcttcttt cttccgctcc
     2581 aaggcttgta tctgtggctc actcagaata atgccttgct ctgccaccaa tttttcgagg
     2641 gcagttaagc gttgcttaaa attagctaag tgatgtctca accaaatgga acgtacacca
     2701 cctgcagaga caaaaaccac ctgcagagac aaaaaccacc tgcagagaca aaaaccacct
     2761 gcagagacaa aaatcccctg tttacgcagt tcattactca ctcgaacttg accaaaagca
     2821 ggattatcta aagcgaattg tacaaccgct ttttctgtgg attcatccac acgattttta
     2881 atgttgggaa cacgtcgatt ttgatttagt aatgcctcaa caccgccttg ttcgacagcc
     2941 tgttgatagc gataaaaagt atctcgactc atccccatta ccttacaggc ttgtgagata
     3001 ttacccagtt cttctgctaa atttaataaa ccggtcttgt gtttaataag tggattgcta
     3061 gaataaaaca tgagagtttc ctttttgttt agattgattt ttgacactca tattctaaac
     3121 gggaaactct cactttttag agtgaattgt cagatcaagt ctgatcttct acagacgatc
     3181 caggtcttac acattctttc aagtttgtaa agcctgaaaa ttatttttta tacttgattt
     3241 ttgtcaaaaa gtctctacac tatatggcag ggtcagtttt cgctgtttaa cggtgtttaa
     3301 tgagattttc attactggct ctccttaata gaaatttatg gaagagctat ctgatagagt
     3361 aatctagcga tagctctttt tcattgaaca aagaggctat atgtatctta tgtatgttga
     3421 tgagtctggt tctacgacag atcctactca aaaatatttt gtattatcag gtatcgctgt
     3481 atttgaacga aatactcatt ggattgagaa aaaaatgaat gtgatagcct ctcaattctg
     3541 tcaatattct gaagggagtg atccatattt ctatgagtta catggttcac caatgagatc
     3601 tggaaagagt gaatggagag gcattccaat gagtgagcgt attaatgcca ttcaagattg
     3661 cttgaaatta gttcaaagta ataatattcg tatatttgca gcagttatag agcaagggta
     3721 ttctagtggt caggatacta ttacagaatg ttttgagcaa atatcatctc gatttgatat
     3781 gtatctgagc cgtttacatg cccaaggtaa tacccaaaga ggcatttcta tctttgataa
     3841 atcatcgact gagaagtcaa tccaagcact tgcaagaaca ttcaaaaata gtgggcatac
     3901 ttatgggaaa cttagaaatt tctcagaagt tccattattt cttgactcaa agtcatcgag
     3961 attaattcag ctagcggatc tagtttccta tgcgatattt agacactatg aacacaatga
     4021 tagctcattt tacgatatta taagaaataa ctttgattat cataacgggc gtattcatgg
     4081 tttatattta cggaacaaag aagatattat ttcataaaaa ttcgccccaa aagggagaag
     4141 tatctccctt ttgtattttt tataacaaat taaccgtttc tctcaacatt tccacatcgt
     4201 gttcaatata tcctagtgtc acactgatat ctttatgccc taacagtttc tgaaccacat
     4261 aaacattttc gggcttcttc attaattgag tagcaactgt atgtcgaaat ctgtgtggtg
     4321 atgaagtaaa accgaccaag tcagaaatat gccgaaatat atgtgtaagc tgattttggc
     4381 tcatcggctg tcctcttctt cgagagcatc gagaaaataa attgagattg aacaattggc
     4441 aattatctgt ttgttttctt atttttaatt cagtaataag cctttctata tgaatataaa
     4501 gtgaatctga aatcggtacg atatggtaat catgattttt attgatttcc ggcgaaatat
     4561 aaatcgtcct attagaaaga tctacatcac taattttcag tttcactaat tgtcctcgcc
     4621 gaatccccgt acatctcaat gtcataataa ttgcaaggac aaaccagctt ggttttagaa
     4681 agtcaggtaa tacaacgtta ttattgagta tgtggtctat tttatgtaat tgttcggttg
     4741 aataagtttt ctttctcctt ttcgattctc gaataaataa ctgattaaat ggatttcgat
     4801 ttatattaag taatccttgc gatataccaa agttatataa ggcttttaaa tgtctgacat
     4861 aattattcca cgttactgct ttgattttat cgccaacaat ttgattacgc cattcaatga
     4921 gcatatcggt ggtaatgtca ttggcattta actttggata acgctttttg ataattcgga
     4981 ttacgttgtt gtagctccgt ttggtatccg gacgaagata gtgacgatag aaaaaaaaat
     5041 cggtctagta gcgaatcaaa agagatagaa gttatcattt taagtttcct ctttctgtaa
     5101 agttaaacag tgattattta atagtacctt atccccaaaa aagagacggg tattttttat
     5161 caaatatcct gttaaagagg aagtctttct cggtccaatg acatcacatt tccaaaaatt
     5221 gatggtatcc ggcttaccgt tggtcattgt gtttttaggt gaatgaatcc ctaatccttg
     5281 aaaatcatac tggagattat taattgtttc cttatcataa ggctgtccag tctcttgcaa
     5341 atacatttca aaaataacgg gggtaactaa aaacaggtgg tcttcaacaa tatggagctt
     5401 ggcagtaggc ttgttaattg caaatttgtt ggtcgcaata cctgatttga gccactttac
     5461 aaagttatct cctgtaattg agttctcctt attctgtaac tgtagctctg atagtgttaa
     5521 tgtttcgggc gtttctactg cactttgtgt tactttgagc tttttagtgg tagatttatc
     5581 ctgtacttct tgtttggatg gcatacttgc aatttcctgt cccttaccaa ttgaaatatc
     5641 atcaaggctt ggttcggaac tttccgtagg tgcaaacata tccagcacaa aggaggttaa
     5701 atcattttca tcatttatga tgatttctga ggatggtgca ttatccgagt ttgtctctac
     5761 ctgagatatt tcaacttctt tagaggcaat aatgccccct gtctgaacac tcggtaatgg
     5821 agctggttta gtggtcccat cgactaatgt agactgagtc tctatattac tttcttctgt
     5881 tatctgctcg actattttaa cttttccggc aaaataattt ggtcgatcat taatattctc
     5941 ccaagccact tctggtttaa ttctcaataa tgtaaaggta tttgctggcg tccaacctga
     6001 atcagcttga atacggcaac tccaaattgc tccaccagcc ggtgattctt ctacaatacc
     6061 gagagactgc atttcatcaa ataactttgg attatcctta ggcactgaaa ttccctgccc
     6121 cagtaagtaa gctcggatat tatcagcagc agttttgcta acaagccaca atccttcctc
     6181 agtgaaccaa ccgtctgccg gacctttggg tgtatttaac tttattttct gttccagcaa
     6241 ataacgtagt gccaagacca gttgctttga cagagaattg acaggacgtt gaaccagttt
     6301 atttacatcg ccaccgagtg cgagggtaac actatgctga tcggctttct gcacgatctc
     6361 agataaaagc ccggctttat cgttatgccc agacattgca tacatcagtg aagaaatgac
     6421 ttctggatac tgtcccagcc aatcaaacgc agattttgga ataagttgat ttgcaaggaa
     6481 gcctcctagc accggatgaa gatggtagtc tcgacctttg atgtatttga atttataagg
     6541 ttgaggtggt aacccattcc aagcaaacca acgtgaaccg tctttgagtg taatttcaat
     6601 atcaacgaca actttgccaa tatcgtgaac
//
LOCUS       DANLXD010000119         6586 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.120, whole genome shotgun sequence.
ACCESSION   DANLXD010000119 DANLXD010000000
VERSION     DANLXD010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6586)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6586)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6586
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.120"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..196)
                     /locus_tag="PXD18_002213"
     CDS             complement(<1..196)
                     /locus_tag="PXD18_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302598.1"
                     /translation="MSTTLNEINITELDAGPEIKSLSLNDAVNSFLNDSACPICGKNC
                     QYWQRLKRSLNRKENQGKGDK"
     gene            complement(230..1516)
                     /gene="purD"
                     /locus_tag="PXD18_002214"
     CDS             complement(230..1516)
                     /gene="purD"
                     /locus_tag="PXD18_002214"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012771675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HDL6302599.1"
                     /translation="MNILIIGNGGREHALAWKVRQSPLADKVFVAPGNAGTAMENGIE
                     NVAISATDVPALVTFAKQNSVGLTIVGPEAPLVVGVVDAFRAHGLTIFGPTQAAAQLE
                     GSKAFTKDFLARHQIPTAEYQNFTEIEPALAYLKQKGAPIVIKADGLAAGKGVIVAMT
                     LQEAEDAVRDMLSGNAFGEAGSRVVIEEFLDGEEASFIVMVDGKNVEPMATSQDHKRV
                     GEGDSGLNTGGMGAYSPAPVVTKAIHQRVMDEIIYPTVQGMASENTPYTGFLYAGLMI
                     MPNGQPKVIEFNCRFGDPETQPIMMRLESDLVELCLKACEGKLDSVQSKWCEQAALGI
                     VLAAAGYPGDYRKGDEIIGIPTSTSNQKVFLAGVEQKEGKLLTNGGRVLCATALGNSV
                     FEAQQQALQLAEQIQWQGKFYRRDIGYRAVARKQAK"
     gene            1750..2124
                     /gene="rpsF"
                     /locus_tag="PXD18_002215"
     CDS             1750..2124
                     /gene="rpsF"
                     /locus_tag="PXD18_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HDL6302600.1"
                     /translation="MRHYEIVFMVHPDQSEQVPAMIERYTASVKEAGGQVHRLEDWGR
                     RQLAYPINKLHKAHYVLMNVEAPQSVIDELETNFRYNDAVLRNLIVHTKAAVTEASPM
                     VKAKESKVAEAVAEVESEEAGE"
     gene            2099..2473
                     /gene="priB"
                     /locus_tag="PXD18_002216"
     CDS             2099..2473
                     /gene="priB"
                     /locus_tag="PXD18_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HDL6302601.1"
                     /translation="MNQRKQASNLPIDNCLILSGTVSSLVKQSLNPLGVPHYSFWLEH
                     RSIQTEVNLERQAWCKIQVVLAGNQFSYLTQQIKLGESVRIKGFIHTHKDFNGLNQLV
                     LHTEQIEFIDQEKPNGTLFPSS"
     gene            2448..2675
                     /gene="rpsR"
                     /locus_tag="PXD18_002217"
     CDS             2448..2675
                     /gene="rpsR"
                     /locus_tag="PXD18_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HDL6302602.1"
                     /translation="MARYFRRRKFCRFTAENVVEIDYKDIATLKNYISESGKIVPSRI
                     TGTRAKYQRQLARAIKRARYLALLPYTDNHQ"
     gene            2691..3140
                     /gene="rplI"
                     /locus_tag="PXD18_002218"
     CDS             2691..3140
                     /gene="rplI"
                     /locus_tag="PXD18_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HDL6302603.1"
                     /translation="MQVILLDKVAHLGSVGDQVTVKSGFARNFLIPQGKAVMATAANI
                     AHFEARRAELEAKAAAALATAQERAAKIAALAAVSVSATAGDDGRLFGSVSAKDIAEA
                     LTAAGVGVAKSEVRLGEGPLRTTGEHQVKIHLHPEVNATVAVNVVAE"
     gene            complement(3204..3980)
                     /gene="dnaQ"
                     /locus_tag="PXD18_002219"
     CDS             complement(3204..3980)
                     /gene="dnaQ"
                     /locus_tag="PXD18_002219"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HDL6302604.1"
                     /translation="MTEEKIIRQVVLDTETTGMNMAGGPPQIGHNIIEIGAVEVINRR
                     LTGRTYHVYIKPPREVDEEAIAVHGITNEFLQDKPVFAEIAEEFLDFIKGAELIIHNA
                     PFDVAFMDQEFSYLPNPPAKTAEMCTVTDSLQMARRMYPGKRNNLDALCDRLGIDNSK
                     RVLHGALLDAEILADVFLMMTGGQISLLGEEETEVVSEVIDIEEEFSAIVLNADEAII
                     LKANDEEEESHLALLKLIEKKSKGNCLWTKALTDTAEISH"
     gene            complement(4068..5738)
                     /gene="ettA"
                     /locus_tag="PXD18_002220"
     CDS             complement(4068..5738)
                     /gene="ettA"
                     /locus_tag="PXD18_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HDL6302605.1"
                     /translation="MSTQFVYTMHRVGKVVPPKRHILKDISLSFFPGAKIGVLGLNGA
                     GKSTLLRIMAGVDKEFEGEARPQPGIKIGYLPQEPKLAPQQTVREAVEEAVAEVKNAL
                     TQLDEVYAMYADENADFDKLAAKQAELEAIIQAHDGHNLQNQLERAADALRLPDWDAK
                     IEHLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDYEGTVVAITH
                     DRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKEKRLAQEQAAESARQKSIEKELEW
                     VRQNPKGRQAKSKARMARFEELNSGEYQKRNETNELFIPPGPRLGDKVIEVQNLTKSY
                     GDRTLIDDLSFAIPKGAIVGIIGANGAGKSTLFRMLSGKEQPDSGSIVLGETVVMASV
                     DQFRDAMDDKKTVWEEVSNGQDILTIGNFEIPSRAYVGRFNFKGVDQQKRVGELSGGE
                     RGRLHLAKLLQRGGNVLLLDEPTNDLDVETLRALENAILEFPGCAMVISHDRWFLDRI
                     ATHILDYGDEGKVTFYEGNFSDYEEWKKKTFGEAATQPHRVKYKRIAK"
     gene            5944..6423
                     /locus_tag="PXD18_002221"
     CDS             5944..6423
                     /locus_tag="PXD18_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302606.1"
                     /translation="MYVQKHSNYSTALLVVIREKINSLPHQGLILDLISISKDDLDDI
                     LEGNTDMNIHQLLSLIYKAGFFDVLNITNNLCIKLSQFGFYFQNGNLSQKDDELLSLY
                     REFYKHNEFITHLKSHSLYGCIEQPTSAFFHYCTNENFRNAFNEESLYDFQMWNVFR"
     gene            6433..>6586
                     /locus_tag="PXD18_002222"
     CDS             6433..>6586
                     /locus_tag="PXD18_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302607.1"
                     /translation="MSSQNSFLTKYSKSNSHSQDSQKINESLEWLNEKNYGELYSSFL
                     IAVGVKE"
BASE COUNT         1774 a         1463 c         1368 g         1981 t
ORIGIN      
        1 ctttatctcc cttaccttga ttttcttttc tatttaaaga tctttttagt ctttgccaat
       61 attgacagtt ttttccacat atagggcacg cagagtcatt tagaaaagag tttactgcat
      121 cgtttaatga tagtgattta atttcggggc ctgcatcgag ttcagtgata ttaatttcat
      181 taagtgttgt actcataata aatttttcct tgttttaaga gtttataaat tatttcgctt
      241 gttttcttgc cactgctcgg tagccaatat ctcggcgata gaatttgcct tgccattgaa
      301 tttgttcggc aagttgtaag gcttgttgtt gagcttcaaa tacactgttg ccaagtgcgg
      361 tggcacaaag tacacgtcca ccgttggtga gcagttttcc ttctttttgc tcaacccctg
      421 ctaagaaaac tttttgattg gaggtagagg tcggaatgcc tatgatttca tcgcctttac
      481 ggtaatcgcc cgggtagcct gcggcagcta aaacaatgcc taatgcggct tgttcacacc
      541 attttgattg cacgctatcc aatttgcctt cgcacgcttt taagcacaat tcaacgaggt
      601 ctgattccaa acgcatcata atcggctgag tttcagggtc tccaaaacgg cagttaaatt
      661 caatcacttt cggctgaccg tttggcataa tcattaagcc ggcatagaga aaaccggtgt
      721 aaggggtatt ttcgcttgcc attccttgca cggtcgggta aataatttcg tccattacac
      781 gttggtggat tgcctttgtt accaccggag caggggagta agcccccatt ccgccggtat
      841 ttaagccgct atcgccctcg ccaacacgtt tgtggtcttg tgaggttgcc attggttcga
      901 catttttgcc gtccaccatc acaataaaac tggcctcttc tccgtctaaa aattcctcga
      961 tcaccacacg gctgccggct tcaccaaagg cgttgcctga cagcatatca cgcactgcat
     1021 cttccgcctc ttgtaaagtc attgcaacaa ttacgccttt gcctgcggct aaaccgtctg
     1081 ctttgattac aatcggtgca cctttttgtt ttaagtaggc aagtgccggt tcaatttcgg
     1141 tgaaattttg gtattctgcg gttggaatct gatggcgagc caagaaatct ttggtaaatg
     1201 ctttagaacc ttctaattga gcagcggctt gggtcgggcc gaaaatggtt aaaccgtggg
     1261 ctcgaaaagc atcaaccacg ccaactacta acggtgcttc agggccgaca atcgtcaaac
     1321 ctacgctatt ttgtttagcg aatgtaacta aggcaggcac gtcagtggcg gaaatagcta
     1381 cattttcaat gccgttttcc atcgctgtgc cggcattgcc gggggcgaca aagactttgt
     1441 ctgcgagcgg cgattgacga actttccaag caagagcgtg ttcacgccca ccgttgccga
     1501 taattaaaat attcattggg attccttgca aaaatgataa agcaaacgtt tgcgtattgt
     1561 acttgatttg tttatctgct gacaagcagt cgtttttctc ggattttttg caaaatacga
     1621 aattgttgct tgcaaaatag gcttttttca gtataatcct gccgttcagt cacattcgtt
     1681 ttttaatcct tgcttccaca agttggtgac tggctaaagt tggaggctgc taacccgtaa
     1741 ggatagtcaa tgcgtcacta cgaaatcgtt tttatggttc acccggacca aagcgaacaa
     1801 gtaccagcaa tgattgagcg ctacacagcg tctgtaaaag aagctggcgg tcaagttcat
     1861 cgcttagaag attggggtcg tcgtcaatta gcatacccaa tcaacaaact tcacaaagca
     1921 cactatgtgt taatgaatgt agaagcacct caaagtgtaa tcgacgagtt agaaactaac
     1981 ttccgttata acgatgcagt tcttcgtaac ttaatcgttc acactaaagc ggcagtaact
     2041 gaagcgtcac caatggtgaa agcgaaagaa agcaaagttg ctgaagcggt agctgaagtt
     2101 gaatcagagg aagcaggcga gtaatttgcc gattgataat tgtttaatct taagcggaac
     2161 ggtttccagc ttggttaaac aaagcctaaa cccccttggt gtgcctcatt acagtttttg
     2221 gttagaacat cgttcaatcc aaaccgaagt gaatttagaa cgccaagcgt ggtgcaaaat
     2281 ccaagtggtt ttggcaggca atcaatttag ttatttaacc caacaaatta agctcggtga
     2341 gagcgtgaga attaaaggtt ttatccatac tcacaaagac tttaacggtt taaatcagtt
     2401 agtcttacac accgaacaaa ttgaatttat agatcaggag aagccaaatg gcacgttatt
     2461 tccgtcgtcg taagttctgc cgtttcacag cggaaaatgt tgttgaaatc gattacaaag
     2521 atatcgctac attaaagaac tacatttctg aaagcggcaa gattgttcct agccgtatta
     2581 ctggtactcg tgcgaagtat caacgtcaat tagctcgtgc aattaaacgc gctcgctacc
     2641 ttgcgttact tccatatact gataaccacc aataatcagg agagagtaca atgcaagtta
     2701 ttttattaga caaagttgct cacttaggtt ctgtgggcga ccaagtaacc gttaaatctg
     2761 gttttgctcg taacttctta atcccacaag gtaaagcggt tatggcaact gcggcaaaca
     2821 ttgctcactt tgaagcacgt cgtgcagaat tagaagcaaa agctgcagca gcattagcaa
     2881 ctgcacaaga acgtgcagcg aaaattgcag cattagcagc agtatcagta tctgcaactg
     2941 caggtgatga tggtcgttta ttcggttctg tatcagctaa agacatcgct gaagcattaa
     3001 ctgcagcagg tgttggagtt gctaaatctg aagttcgttt aggtgaaggt ccacttcgta
     3061 caaccggcga acaccaagtt aaaattcact tacaccctga agtgaatgca actgtagcag
     3121 taaacgttgt tgctgaataa tcagtagaaa tagaaaaccc agcgaaagct gggttttttg
     3181 tttgctttat ttattggtta gaatcagtga gatatttctg ctgtgtcggt taatgctttt
     3241 gtccataggc aatttccttt ggattttttc tcaatcagtt tcagaagtgc taaatgcgac
     3301 tcttcctctt catcgtttgc tttaagaata attgcctcat cggcatttaa cacaattgca
     3361 gaaaattctt cttcaatatc aataacttca cttaccactt cagtttcttc ttcgcctaat
     3421 aatgaaatct gaccgccggt catcattagg aatacatcag ctaagatctc cgcatccagt
     3481 aacgccccgt gtagtacacg cttgctatta tcaatgccga gcctgtcgca aagtgcatct
     3541 aaattattcc gtttgccggg gtacattctt cgtgccattt gcaggctatc ggttacggta
     3601 cacatttctg cggtttttgc cggtggatta ggcagataag aaaattcttg atccataaac
     3661 gccacatcga agggggcatt gtgaataatt aattccgcac ctttgatgaa atccaaaaac
     3721 tcctcggcaa tttcagcaaa aacaggttta tcttgcaaaa attcattggt gatgccgtga
     3781 actgcaatcg cctcttcatc tacctcacgc ggtggcttga tataaacgtg ataagttctg
     3841 ccggttaaac ggcggttaat gacttcaacc gcaccgatct caataatatt atgcccaatc
     3901 tgtggcgggc cacctgccat attcattcct gtggtttcag tatccagcac tacttggcgg
     3961 ataatttttt cttctgtcat attcaattta aaattgtagg ggtgaaatat ttttatccct
     4021 taattctgca tttgattagg ggcgaaacat atttcgcccc tacattgtta cttcgcaatc
     4081 cgtttatatt tcactcggtg cggttgggtg gcggcttcac cgaaggtttt cttcttccac
     4141 tcttcatagt cggagaagtt accctcgtag aacgtcactt tgccttcatc gccgtagtct
     4201 aaaatatggg tggcgatacg gtctaagaac cagcggtcgt gcgaaattac cattgcacag
     4261 cccgggaact ctaagatcgc attttccaac gcacgcaggg tttctacgtc taagtcgttg
     4321 gtcggctcgt ccagtaacaa cacgttaccg ccacgttgta gtagcttcgc caagtgtaaa
     4381 cgaccacgtt caccgcctga aagctcgccc acacgttttt gctgatctac gcctttgaag
     4441 ttgaaacgcc ccacataagc acggcttggg atttcaaagt taccaatcgt gagaatatcc
     4501 tgcccgttcg acacctcttc ccacacggtt ttcttatcgt ccatcgcatc acggaactga
     4561 tcgaccgatg ccattaccac cgtttcacca agcacgattg aaccagaatc cggctgttct
     4621 ttaccagaaa gcatacggaa caaggttgat ttacccgcac catttgcccc gataatcccg
     4681 acaatcgccc ccttcggaat agcgaacgac aagtcgtcaa tcaaagtgcg atcgccgtaa
     4741 gatttagtca ggttttgtac ctcgatcact ttatcaccta agcgtggacc cggtggaata
     4801 aagagttcgt tagtctcgtt acgtttttga tattcgcctg agttaagctc ttcaaagcgt
     4861 gccatacgag ccttactttt cgcttggcga ccttttggat tttggcgtac ccattccaac
     4921 tctttctcaa tcgatttttg acgagccgat tccgccgctt gctcttgtgc caagcgtttt
     4981 tctttctgct ccaaccaaga agagtagtta ccttcccaag gaatgccttc accacggtca
     5041 agctctaaga tccagcccgc aacgttgtct aagaagtaac ggtcgtgggt aattgccact
     5101 acggtgcctt cgtagtcgtg gaggaaacgc tccaaccacg ccaccgattc cgcatctaag
     5161 tggttggtcg gctcatctaa caataacata tccggttttt ccagcaacag acggcaaagt
     5221 gccacacggc ggcgttcacc ccctgataaa tgctcgattt ttgcgtccca atccggcaga
     5281 cgtaacgcat cggcagcacg ctctaactgg ttttgaaggt tatggccatc gtgggcttga
     5341 ataatcgcct ctaattccgc ctgttttgcc gctaatttgt cgaaatcggc attctcatca
     5401 gcatacatcg catagacttc atcaagctgg gttaaggcgt ttttcacttc cgcaaccgct
     5461 tcttccaccg cttcacgcac ggtttgctgt ggggcaagtt tcggttcttg tggaagatag
     5521 ccgattttaa ttcccggttg tggacgagcc tcgccctcga actctttatc tacgcccgcc
     5581 ataatgcgta aaagcgttga tttacccgcc ccgtttaagc cgagcacccc gattttcgcc
     5641 cccgggaaaa agctcaggga aatatcttta agaatgtgac gcttcggcgg cacgactttg
     5701 ccgacacggt gcatcgtata tacaaattga gttgacattg gttgtattcc tcacaaaaaa
     5761 attcgcctta ttttacttga atttacagcc aaaatatagg gtggttttgg cttttggtaa
     5821 agtaaccttt tccaatagag atgttatttg aggctgcata gtactatgca tttctcttac
     5881 cttgacaggt aagagaaaca aatcctgaag gaaaaaaatt ttaaggaagt tattctatgc
     5941 aatatgtatg tccaaaaaca ctcaaattat tcaacagcat tgttggttgt tataagggag
     6001 aagattaatt ctctacctca tcaaggcttg attttagatt taatatccat ttctaaagat
     6061 gatttagatg atattttgga gggtaatact gatatgaata ttcatcaatt attaagcctg
     6121 atttataagg ctggattttt tgatgtatta aacatcacaa ataatctatg tataaaactc
     6181 agtcaatttg gtttttattt ccaaaatggc aatttgagcc aaaaagatga tgagcttttg
     6241 agtttatata gagaattcta taaacataac gagtttatca ctcatctcaa gtcccatagt
     6301 ctttatggat gtattgagca acctacttcg gcattttttc attattgtac taatgaaaac
     6361 tttagaaatg cgtttaatga agagagcctc tatgattttc aaatgtggaa tgtgtttaga
     6421 taggagtttt ttatgtcatc tcaaaatagt ttcttaacaa aatattcaaa aagtaattct
     6481 catagtcagg attctcaaaa aataaatgag tcattagaat ggctgaatga aaaaaattat
     6541 ggtgaattat atagttcctt tctgattgca gtgggagtga aagagt
//
LOCUS       DANLXD010000120         6564 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.121, whole genome shotgun sequence.
ACCESSION   DANLXD010000120 DANLXD010000000
VERSION     DANLXD010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6564)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6564)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6564
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.121"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..765
                     /locus_tag="PXD18_002223"
     CDS             <1..765
                     /locus_tag="PXD18_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase"
                     /protein_id="HDL6302608.1"
                     /translation="YESYLALNTKLDFTRYIQKARKFNEYNTDILYRSFDNFFAHYDT
                     GVKHNNLSLGLNTKLSENLRGGLFFEYSNKNRNSVQIGARAKYEMDNHQLSGFLRYRG
                     VKHKDMLARNNSVDGYLNYAYRIQLDDKLSISPSVGAYVSRSSRSLIDEDLAINSRTV
                     YASDVGLNIHYKLNDIDAYIRPSIGFVNGDITLSQSNDMTNTYKIKDKSNVYSVTTGL
                     KKRFANGVALGADFKLHRYGSQTTESNFGLNVSYNW"
     gene            complement(932..1468)
                     /gene="hpt"
                     /locus_tag="PXD18_002224"
     CDS             complement(932..1468)
                     /gene="hpt"
                     /locus_tag="PXD18_002224"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HDL6302609.1"
                     /translation="MEKHHIETLHSKEEVLNRINELAKEINQHYHQKQCQNLVVVGLL
                     RGSFMFMADLVRKLELPVEVDFLTASSYGSSTESSRDVKILKDLDGEIQGKDVLIVED
                     IIDTGFTLSKVGEILKLREPNSLAICTLLDKPCRREVDVPVKWVGFEIPDEFVVGYGI
                     DYAQKYRHLDYIAKVVIE"
     gene            complement(1507..2856)
                     /gene="pmbA"
                     /locus_tag="PXD18_002225"
     CDS             complement(1507..2856)
                     /gene="pmbA"
                     /locus_tag="PXD18_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HDL6302610.1"
                     /translation="MSITDKQTLLQQEQELRQAVEFALNFAKQAGAEAEVGVTKVAGL
                     SVSSRLEQVENIEFNNDGSLGISVYLGKRKGNASTSDLQPESIQKTVEAALAIAKYTS
                     EDACTGLADKELLAFEAEDLELYHQADISVDQAVELAIEAEHYALNADEKIVNSDGAT
                     FNSHSGVRVYGNTHGMLQSYLSSRYSLSCSVISAYEDQLERDYEYTIFREFDKLQAPK
                     WVGEQAAIKAVDRLNPQRIKTGEMSVIFYNDVATGLVGHLAGAISGGALYRKSSFLLD
                     KLGEQILPEWFAISERPHLLRQLASSAFDSEGVITQNREIITDGVLQTYLMTSYSGRK
                     MGLKSTGHAGGIHNWLVKPNRQGGLNTLLKEMGTGLLVTEMLGSAINSVTGEYSRGAA
                     GFWVENGEIQYPVAEITIAGQLQDMYKNLVAVGDDIEHRSNIQTGSILLEKMMVSGE"
     gene            2955..3485
                     /locus_tag="PXD18_002226"
     CDS             2955..3485
                     /locus_tag="PXD18_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HDL6302611.1"
                     /translation="MAKKRSKNEIDWTDEEEEIIWVSKSEIKRDSEHLKKIGAELIEL
                     TPQNLEKIPLDDDLKEAIRQAQGFKMEARRRQIQFIGKLLRNRDQEPIQEALDKVKNR
                     HNQQQALLHKLELVRNQLIAMGDASLDNLLTEYPQLDRQHLRNLIRGAIKEREANKPA
                     KNYREIYQYLKTEIVE"
     gene            3491..3862
                     /locus_tag="PXD18_002227"
     CDS             3491..3862
                     /locus_tag="PXD18_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HDL6302612.1"
                     /translation="MEYLSTILKAHIGLAYISLILLLTRGFLSSKMVDWRQYKILRIA
                     PHAVDTFLLITGIAAVAIFLAYDFFTLAQFSWLLPKLLFLVLYIVFATKAFKKGQPFS
                     LKFYLLAVVSFLLMMLTATFH"
     gene            3875..4588
                     /locus_tag="PXD18_002228"
     CDS             3875..4588
                     /locus_tag="PXD18_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HDL6302613.1"
                     /translation="MIGPFVNAGAIILGGVLGACLGSHLPERIRTTLPLVFGLCCFGL
                     GMMLTASVKYMSAVALALILGTIIGELIYLENRIGKVAGLARGLIDRLFPPVHSLSQE
                     EFLEKFIALLVLFCVSGTGIFGAIKEGMTGDPSILYIKSILDFFTAMIFAASLGYAIA
                     AIAVPLIIVQGILILLATVIMPLTTANMMADFSATGGLLLFATGFRICGIKNFPVANM
                     LPALLLAMPMSYFWEWLVH"
     gene            4591..5154
                     /locus_tag="PXD18_002229"
     CDS             4591..5154
                     /locus_tag="PXD18_002229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HDL6302614.1"
                     /translation="MKKRIIVGISGASGFQYGYKVLELLKPFSEIETHLVISKGAELT
                     RTLETDYTREALHDLADQIHSLNNVGASIASGSFKTEGMVIAPCSMRTLAAIANGLSD
                     NLLTRAADVVLKERRKLVLMVREAPLNLAHIDNMRKVTEMGGIIFPPIPAFYQKPTSL
                     DEMVTHSVSHALSLLDIDIPNTPHWGE"
     gene            5217..5657
                     /locus_tag="PXD18_002230"
     CDS             5217..5657
                     /locus_tag="PXD18_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HDL6302615.1"
                     /translation="MHNPIPTHILDFIQTNHVVNIAAHTEQDFWAANCFYAFDQENVR
                     LIILTAKKTRHAGLMLENPHIVGTICGQIEKINEIEGVQFSATAECLEDKQAEKAALQ
                     IYYQKHPLARLKPSDVWVLSFNTIKHTGNKLMFAKKTIWERNII"
     gene            complement(5661..6536)
                     /locus_tag="PXD18_002231"
     CDS             complement(5661..6536)
                     /locus_tag="PXD18_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6302616.1"
                     /translation="MMKTILIDEANQIKGFSHLYRLRSDLMLKYTEISVTETVEQEPA
                     EFEAGLRLVILLSGRSEIDFNSEVFELDASLKPQAAFLPLNRAEMGRKIFRKGQLQKE
                     LVIFLYPKWLIESQLNLASYHHFKQHLKAHQIILTQSMLKLIHDIVSEQEMQPFGLLE
                     KEGNLLALLASAFSQLTQAPRLKKDRVQQLTELLESGKFDGWSLKQIAIYFHTNVTTL
                     QNEFQHYHKTSIFAYLRRSKLEQAYKLLLQGQSITQAAEFAGYANSENFSTAFKRTFG
                     ITPSQIKRDKAKGII"
BASE COUNT         1941 a         1339 c         1216 g         2068 t
ORIGIN      
        1 tatgaaagct atttggcttt aaatactaaa ttagacttca ctcgctacat ccaaaaagcg
       61 agaaagttca atgaatataa cactgatatt ttatatcgta gctttgataa tttctttgcc
      121 cattacgaca caggtgtaaa acacaataat ctatccttag gcttgaatac aaaattaagt
      181 gagaatttac gtggtggctt attctttgaa tacagtaata aaaatcgtaa tagcgtacaa
      241 attggtgcaa gagctaaata tgaaatggat aatcaccaac tttctggctt cttacgctat
      301 cgtggcgtaa aacataaaga tatgctagca cgtaataaca gtgttgatgg ctacctaaat
      361 tatgcttatc gtattcaatt agatgataaa ttaagcatta gcccatcagt tggtgcttac
      421 gtttcacgtt cttctcgctc attaatagat gaagatcttg cgattaatag ccgcacggtc
      481 tatgcaagtg atgtaggatt gaatatccat tataagctaa atgatattga tgcttatatt
      541 cgtccaagta taggctttgt caatggtgat ataactttat ctcaatctaa tgatatgaca
      601 aacacataca aaataaagga taaaagtaac gtgtattctg tcacgacagg gttgaaaaaa
      661 cgctttgcaa atggtgtggc attaggggct gatttcaaat tacatcgtta tggttctcaa
      721 actactgaaa gtaatttcgg tctaaatgta agttataact ggtaataccg taaactgatt
      781 acgatttaaa agttagacta gcccaagact gagttctata ttccatagag ctcagtcttt
      841 taatttttct ttctcgataa gaatatttta tatttcaacc ttaatcgaga atgtaattag
      901 tcgtgaaaat ctaagtagtg attgagtttt tttattcaat cactacttta gcaatataat
      961 ctaaatgacg atatttttgg gcataatcaa tcccataacc caccacaaat tcatcgggga
     1021 tctcaaatcc cacccatttt acgggcacat caacttcgcg gcggcaaggt ttatctaata
     1081 aagtacaaat agcaagtgaa tttggctcac gtaacttgag aatctcccct accttgctta
     1141 aggtgaagcc agtatcaata atatcttcta caatcaatac atctttacct tgaatttcgc
     1201 catctaaatc ttttagaatt ttgacatcac ggctggattc cgtgctgctg ccatagcttg
     1261 atgcggttag aaaatccact tctacaggta actctagctt tcttactaaa tctgccataa
     1321 acataaacga gcctcgcaat aaaccaacca ctacaaggtt ttggcactgt ttttggtgat
     1381 agtgttgatt gatttctttt gctaattcat tgattcggtt taatacttct tcttttgaat
     1441 gtagcgtttc gatatgatgt ttttccattg atttctccaa ataaaattga ttacaagcgg
     1501 ccgtttttac tcgcctgaaa ccatcatttt ttctaataag attgaacctg tttggatatt
     1561 tgagcggtgt tcaatatcat cgcctaccgc cactaaattt ttatacatat cttgcagttg
     1621 ccctgcaatg gtaatttccg ctacagggta ttgaatttca ccgttttcta cccaaaatcc
     1681 tgctgcacct cgagagtatt cccctgttac gctattaatc gcagaaccta gcatttccgt
     1741 tactaataat cctgttccca tttccttaag taacgtattt aaaccacctt gacgatttgg
     1801 tttaactaac cagttatgaa taccacctgc gtgtcctgta ctttttaacc ccattttacg
     1861 ccctgaatag ctagtcatta aatacgtttg tagcacgcca tcagtaataa tttcacggtt
     1921 ttgggtaatt acaccttcac tatcaaacgc agaagaggct aattgacgca acaaatgcgg
     1981 acgctctgaa atcgcaaacc attcaggcag aatctgttcg cctaatttat ctaataagaa
     2041 acttgatttg cggtataatg caccgccact aatagctccg gccaaatgcc ccactaaacc
     2101 ggttgccaca tcgttataga aaatcacaga catttcgccg gtcttaattc gttgcggatt
     2161 caatctatct accgctttaa ttgcagcttg ctcccctacc catttcggtg cttgtaattt
     2221 atcaaactca cggaaaatgg tgtattcata atcacgctca agctgatctt cataagctga
     2281 aatcacgcta caagagagtg aatatcggct cgacaggtaa ctctgcaaca ttccgtgcgt
     2341 attgccataa acacgcacgc cactgtgaga attgaaagtt gccccgtcac tattcacaat
     2401 tttttcgtct gcatttaagg cataatgctc cgcttcaatc gccaattcga ctgcttgatc
     2461 aactgaaata tccgcttggt ggtacaattc caaatcttct gcctcaaagg caagcaattc
     2521 tttatcagca agcccggtac aagcatcttc tgaggtatat tttgcaatcg caagagctgc
     2581 ttcaaccgtt ttttgaatcg actctggctg aagatcggag gtggaagcat tacctttgcg
     2641 tttgcctaaa taaaccgaaa taccgagaga accatcgtta ttgaactcga tgttttcaac
     2701 ttgctctaaa cggcttgaaa ccgaaagccc ggcaacttta gtcacgccta cttccgcctc
     2761 tgccccagcc tgttttgcaa aatttaaggc aaattcgacc gcttgtcgta gctcctgttc
     2821 ttgttgtaac aaggtttgtt tatctgtaat tgacattttg ttccattgat tgattgcatt
     2881 gatgaatata ttctaactca aatttctgtt agaatacggc attttttaga gtttatgtaa
     2941 tgaaaggata aagaatggct aaaaaacgga gcaaaaacga aattgactgg acagatgagg
     3001 aagaagaaat catctgggtc agcaaaagtg agataaaacg agattctgaa cacttaaaaa
     3061 aaattggggc tgaattgatc gaattgaccc cacaaaattt ggaaaaaatt ccactagacg
     3121 atgatttaaa agaggcaatt cgccaagctc aaggctttaa aatggaggct cgccgccgtc
     3181 aaattcaatt tatcggcaaa ttattacgca accgtgacca ggagccgatt caagaagcct
     3241 tagataaagt gaaaaatcgc cataatcagc aacaagccct attacataaa ttggaattag
     3301 tgcgtaatca actgattgca atgggcgatg catcattaga taatttattg acggaatatc
     3361 ctcaattaga ccgccaacat ttgcgtaatt taattcgtgg ggcaattaaa gagcgtgaag
     3421 ccaataaacc ggcaaaaaat taccgtgaaa tttatcaata tttaaaaact gaaatcgtgg
     3481 agtgattatt atggagtacc tatcaaccat tcttaaagct catatcggct tagcttatat
     3541 tagtttaatt ttattattaa cccgtggatt tttatcgtca aagatggtgg attggcgaca
     3601 atataaaatt ttgcgcattg ccccacacgc agttgatacc ttcttactta tcaccggtat
     3661 tgctgctgtc gctattttct tagcttatga ttttttcacc ttagcacaat tcagttggtt
     3721 gctaccaaag ttactcttct tagtacttta tattgtattt gcgacaaaag cgttcaaaaa
     3781 aggacaaccg ttttcgctca aattttatct gttagccgta gtctcattct tattaatgat
     3841 gctaactgcc acttttcact aaataaggga aactatgatc gggccttttg tgaatgccgg
     3901 tgcaattatt ttagggggcg tgctgggtgc ttgtttaggg agtcacctgc ctgaacgtat
     3961 tcgcactacg ttgccgctgg tattcggctt atgctgtttc ggcttaggta tgatgctgac
     4021 tgcctcagta aaatatatgt ctgcggttgc cttagcattg attttaggca cgatcatcgg
     4081 tgaactgatt tatttagaaa acagaatcgg taaagttgcc ggtttagctc gtggtttaat
     4141 tgaccgccta ttcccaccgg tgcatagtct ttcccaagaa gagtttttag agaaatttat
     4201 tgctctgctt gtactgtttt gtgtgagcgg taccggcatt tttggtgcaa taaaggaagg
     4261 aatgacaggc gatccaagta ttctttacat taaatcgatt ctagatttct tcaccgcaat
     4321 gattttcgct gcttcgttag gctatgccat tgcggcgatt gcagtgccgt tgattattgt
     4381 gcaagggatt ttaattctac tggcaaccgt gattatgcct ttaaccactg ccaatatgat
     4441 ggcagatttc tccgcaaccg gcggtttact gctatttgca accggctttc gcatttgtgg
     4501 aattaaaaac tttccggtcg caaatatgct accagcacta ctccttgcga tgccgatgtc
     4561 ttatttctgg gaatggttgg tacattaatg atgaaaaaac gtattattgt cggcattagt
     4621 ggggcaagtg gttttcaata tggctataaa gtgcttgaac tgctgaaacc gttttcagaa
     4681 attgaaaccc accttgtaat cagcaaagga gctgaactca ctcgtactct cgaaacggat
     4741 tatacccgag aagctcttca tgatttagct gatcaaatac attcgctaaa caatgtcgga
     4801 gcaagcattg ccagtggttc atttaaaacc gaaggtatgg tcatcgcccc gtgttctatg
     4861 cgaacccttg ccgctattgc caacggtttg agcgataatt tgctgacccg tgcggcagat
     4921 gtggtgttga aagaacggcg taaattggta ttaatggtga gagaagctcc gctcaacctt
     4981 gctcatattg acaatatgcg aaaagtcaca gaaatgggcg gcattatttt cccacccatt
     5041 ccggcgtttt accaaaagcc aaccagcctt gacgagatgg tcacccacag cgtaagccat
     5101 gccctttccc tgttggatat tgacattcca aataccccac attggggaga ataattcggc
     5161 ttatcttttg ctttttgaaa tgctagaata cctgataaaa actatcaggt atttttatgc
     5221 acaatccaat cccgacccat attttagatt tcattcaaac taaccacgtt gtcaatattg
     5281 cagctcatac cgaacaggat ttttgggcag caaattgctt ttatgccttt gaccaagaaa
     5341 atgttcgctt gattatctta accgccaaga aaaccagaca cgctggcttg atgcttgaaa
     5401 acccacatat tgtcggcaca atttgtgggc aaattgagaa gatcaacgaa attgaaggtg
     5461 tccaattctc cgctaccgcc gaatgtttag aagataaaca agccgaaaaa gccgctttgc
     5521 aaatttatta ccaaaaacac ccgcttgcac ggcttaagcc tagcgatgtt tgggtgttat
     5581 cattcaatac catcaagcac accggtaata aacttatgtt tgcgaaaaag acgatttggg
     5641 agagaaatat aatttgaagc tcaaataatg cctttagcct tatcccgttt gatttggctt
     5701 ggtgttatcc caaaagttcg cttaaatgcc gttgaaaaat tctccgaatt ggcatatccg
     5761 gcaaattcag ctgcttgtgt aatactctgc ccttgtaata gtaatttata ggcttgttct
     5821 aatttagaac gccttaaata cgcaaaaata gaggttttgt ggtaatgctg aaattcattt
     5881 tgtaatgtgg tcacattggt atggaaatat attgcaatct gcttcaaact ccagccgtca
     5941 aatttaccgc tctcaagcaa ttctgttaac tgttgcaccc gatctttttt taaccgggga
     6001 gcctgtgtca gctgagaaaa agcacttgct aataaagcta atagattacc ttctttctca
     6061 agtaacccaa atggttgcat ttcctgctct gacacaatat cgtgaataag ttttaacata
     6121 ctctgagtca aaataatttg gtgggctttt aaatgctgtt taaagtgatg atagcttgcc
     6181 aaatttaact ggctttctat tagccattta gggtagagaa agataacaag ctctttttga
     6241 agttgccctt tcctaaaaat tttacgcccc atttcagctc tatttagcgg taaaaatgcg
     6301 gcttgaggtt ttaaacttgc atctaattca aatacttccg aattaaaatc aatttccgat
     6361 cgaccactca acaatataac caatcttagt ccggcttcaa attccgcagg ttcttgctct
     6421 acggtttcag taactgaaat ctctgtatat ttcagcataa gatctgaacg tagtcggtat
     6481 aaatgtgaaa aaccttttat ttggttagct tcatcaatca agattgtttt catcattaaa
     6541 aacttttttt cgcatagtca aaat
//
LOCUS       DANLXD010000121         6503 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.122, whole genome shotgun sequence.
ACCESSION   DANLXD010000121 DANLXD010000000
VERSION     DANLXD010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6503
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.122"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            97..2754
                     /gene="aceE"
                     /locus_tag="PXD18_002232"
     CDS             97..2754
                     /gene="aceE"
                     /locus_tag="PXD18_002232"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005628834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HDL6302617.1"
                     /translation="MSENLRNDVDPIETQDWLASLDSLIREEGLERAQFIIEQVISQA
                     RAGGVALPTGVTTDYVNTIPVSEQPAYPGDHKIERRIRSAVRWNAIAAVLRSQKKDLD
                     LGGHISTFQSAATMYEVCFNHFFKAPTEKDGGDLVFFQGHAAPGMYGRAFLEGRITAE
                     QMDNFRQEAFTDGLSSYPHPKLMPEFWQFSTVSMGLGPVNAIYQARFLKYLENRGLKD
                     TSAQKVYAFLGDGEMDEIESKGALSFAGREKLNNLIFTISCNLQRLDGPVNGNGKIVQ
                     ELEALFTGCGWEVIKVLWGSGWDKLLEKDTSGKLKQLMMEVLDGDYLTFKSKNGAYVR
                     EHFFGRYPETAALVADMTDDEIWALRRGAHDSEKLYAAYAKAQKSDKPVVILAHQVKG
                     YRIPEAESKNTAHQSKKMSLDSLKGFRDYFELPLTDEQVESLEYVRFPEGSEEYNYLH
                     GQRKALNGYVPVRKPKFTVDFKVPELSEFQALLDEQPRGISTTMAFSRVLNTLLKDKN
                     IGQQIVPIIADEARTFGMEGLFRQIGIYNPHGQNYVPSDRDLVAYYREAKDGQVLQEG
                     INELGATASWVAAATSYSVSNLPMIPFFIYYSMFGFQRVGDMMWLAGDQLARGFMIGG
                     TSGRTTLNGEGLQHEDGHSHIQAGVIPNCVTYDPAFAFEVAVIVQDGIRRMYGENQED
                     IFYYITTLNEITEQPAMPAGAEEGIRKGLYKFETVEGKGKGHVQLLSSGAIMRHVRAA
                     AQILANDYGITADVFSAPSFNELGRDGADVARWNLLHPTETPRVPYVAQVLQDLPTVA
                     STDYMKMYAEQIRAYVPSKHYHVLGTDGFGRSDSRANLREHFEVDERYVVVAALAQLA
                     KEGTVENKVVAEAITKFGLNVDRINPLYA"
     gene            2958..4868
                     /gene="aceF"
                     /locus_tag="PXD18_002233"
     CDS             2958..4868
                     /gene="aceF"
                     /locus_tag="PXD18_002233"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex
                     dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HDL6302618.1"
                     /translation="MSKQINVPDIGSDEVSVTEVMVKVGDTISVDQSIINVEGDKASM
                     EVPAPEAGVVKEVLVKVGDKVSTGSPMLILESADAAPAQEAPKAEAAPAAPVATTSAV
                     VEVNVPDIGGDEVNVTEIMVKVGDSVEVDQSIINVEGDKASMEVPAPVAGVVKEILIN
                     VGDKVSTGKLIMKFETASAATAQSTPVAEAAPAQASASAIKDVNVPDIGGDEVNVTEI
                     MVKVGDSVSEEQSLITVEGDKASMEVPAPFAGVVKEILVKSGDKVSTGSLIMKFEVAG
                     AAPAPAAAQAASAPAPAPQAAAPAKADAAPAGQNQSGLSQEQVVASAGYAHATPVIRR
                     LAREFGVNLDKVKGTGRKGRIVKEDIQAYVKTAVQVFEKQGGTAAAATGAANGAGLGL
                     LPWPKVDFSKFGEVEEVELSRINKISGANLHRNWVMIPHVTHFDRTDITELENFRKEQ
                     NKEAEKRKLDVKITPVVFIMKAVASALEAFPRFNSSISEDAQRLTLKKYINIGVAVDT
                     PNGLVVPVFKNVNKKGIIELSRELMEVSKKAREGKLTASDMQGGCFTISSLGGIGTTH
                     FTPIVNAPEVAILGVSKSEMQPIWNGKEFEPRLMLPLSLSFDHRVIDGADGARFLSYI
                     NSVLADIRRLVM"
     gene            5068..6492
                     /gene="lpdA"
                     /locus_tag="PXD18_002234"
     CDS             5068..6492
                     /gene="lpdA"
                     /locus_tag="PXD18_002234"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011272714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HDL6302619.1"
                     /translation="MSKEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYSTLGGI
                     CLNVGCIPSKALLHVAKVIEEAKNAVHNGVTFGEPTIDLDQVRAGKEAVVSKLTGGLA
                     GMAKARKVTVVEGLAAFTGPNTLVARDRDGNPTTITFDNAIIAAGSRPIQLPFIPHED
                     PRVWDSTDALKLKEVPKKLLIMGGGIIGLEMGTVYNALGSEVEVVEMFDQVIPAADKD
                     VVAIYTKQIEKKFKLMLETKVTAVEAKDDGIYVSMEGKACNDTKRYDAVLVAIGRVPN
                     GKLIDAGKAGVEVDERGFIRVDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV
                     IAGMKHYFDPKVIPSIAYTEPEVAWVGKTEKECKQEGLNYEVAKFPWAASGRAIASEC
                     SEGMTKLIFDKDTHRVLGGAIVGSNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE
                     SVGLAAEVFEGSITDLPNAKAKKR"
BASE COUNT         1986 a         1231 c         1508 g         1778 t
ORIGIN      
        1 ttcgataaga attggtctaa aaatcaccaa acaaacaaaa tttgttaaaa ttttgttatt
       61 tatcacctca atcgttaatt tataaggaag aatactatgt cagagaactt aagaaatgac
      121 gtagatccaa tcgaaactca ggattggtta gcatcactcg attcattaat tcgtgaagaa
      181 ggtttagagc gcgctcaatt tatcattgaa caagttatta gccaagctcg tgcaggtggc
      241 gtggcattac caacaggcgt aacaacagat tatgtcaata ctatccctgt ttccgagcag
      301 ccagcttatc cgggtgatca taaaatcgaa cgtcgtattc gttctgcggt acgttggaat
      361 gcgattgcgg cagtacttcg tagccagaag aaagatcttg acttaggtgg tcatatttca
      421 actttccaat ctgcggcaac tatgtatgaa gtgtgtttta accacttttt caaagcacca
      481 accgaaaaag atggtggtga tttagtgttc ttccaaggcc acgcagcacc gggtatgtat
      541 ggtcgtgcgt tcttagaagg tcgtattacc gcagaacaaa tggataactt ccgtcaagaa
      601 gcatttacag acggtttatc ttcttaccca caccctaaat taatgcctga attttggcaa
      661 ttctctaccg tatctatggg tttaggaccg gtaaatgcta tttaccaagc tcgtttctta
      721 aaatatttag aaaaccgtgg tctaaaagat acttcggctc aaaaagtata tgcattctta
      781 ggcgatggcg aaatggatga aatcgaatct aaaggtgcat tatcattcgc cggtcgtgaa
      841 aaattaaata acttaatctt cactattagc tgtaacttac aacgtttaga cggtccggtt
      901 aacggtaacg gcaaaatcgt gcaagaatta gaagcactct ttaccggttg tggctgggaa
      961 gtgattaaag tgttatgggg tagtggttgg gataaactgc ttgaaaaaga tacttcaggc
     1021 aaacttaaac agttaatgat ggaagtgctt gatggtgact atttaacctt caaatccaaa
     1081 aatggtgctt acgttcgtga acacttcttc ggtcgttacc ctgaaactgc agcattagtt
     1141 gctgatatga cagacgatga aatttgggca ttacgccgtg gtgcacacga ttctgaaaaa
     1201 ctttatgcag cctatgcaaa agcacaaaaa tcggacaaac cagttgtaat tttagctcac
     1261 caagtgaaag gctaccgtat tcctgaagcg gaaagtaaaa atactgctca ccaatcgaaa
     1321 aaaatgtcat tagacagctt aaaaggcttc cgtgactact tcgagctacc attaaccgat
     1381 gagcaagtag aaagcctaga gtatgtaaga ttccctgaag gttctgaaga gtacaactac
     1441 ttacacggac aacgtaaagc cttaaacggt tatgtgcctg tacgtaaacc gaaatttacg
     1501 gttgatttca aagtgcctga attaagcgaa ttccaagcat tattggatga gcaaccacgt
     1561 ggtatttcaa ccacaatggc gttctctcgt gtattgaata ctttattgaa agataaaaat
     1621 atcggtcagc aaatcgtacc tattattgcg gacgaagccc gtactttcgg tatggaaggt
     1681 ttattccgtc aaatcggtat ttataaccca catggtcaaa actatgtacc gtcagaccgt
     1741 gatttagtag cttactaccg tgaagcaaaa gatggccaag tgttacaaga aggtatcaat
     1801 gagttaggtg caacagcctc ttgggtggca gcagcgactt cttattctgt tagcaactta
     1861 ccgatgatcc cattcttcat ctactactca atgtttggtt tccaacgtgt aggcgatatg
     1921 atgtggttag ccggtgacca attagctcgt ggctttatga ttggtggtac ttcaggtcgt
     1981 acaacattaa acggtgaagg tttacaacac gaagatggtc atagccatat tcaagcaggt
     2041 gtaatcccga actgcgtcac ttatgaccct gcatttgcct ttgaggttgc ggttattgtt
     2101 caagacggta ttcgtcgtat gtatggtgaa aaccaagaag atatcttcta ctacattact
     2161 accttaaatg aaattaccga acagccggca atgccggcag gtgcggaaga aggtatccgt
     2221 aaaggtttat ataaatttga aaccgttgag ggtaaaggta aaggtcacgt acaattatta
     2281 agctcaggtg caattatgcg tcacgtgcgt gcagctgcac aaattctcgc gaatgactac
     2341 ggcattacag cagatgtatt ctcagcacca tcattcaatg aattaggtcg tgatggagca
     2401 gatgtggctc gttggaactt attacaccca actgaaacac cacgtgtacc gtacgttgct
     2461 caagtgttac aagatttacc gactgttgct tcaaccgact atatgaaaat gtacgcagag
     2521 caaatccgtg cttatgtacc aagtaaacac tatcacgtgt taggtacaga cggtttcggt
     2581 cgttcagaca gccgtgcaaa cttacgtgaa cacttcgaag ttgatgagcg ttatgtagta
     2641 gttgcagccc tcgctcaatt agcgaaagaa ggtacagttg aaaacaaagt ggttgcggaa
     2701 gctattacta aattcggctt aaatgtagat cgtattaacc cattatatgc gtaatttcta
     2761 atactctctc ccttgatggg agagagacag ctaaaggttt cgtttagaaa cttttagcag
     2821 agagggtatt agttttattt gcaaaaatgt tgagaaaatc aaccgcttgc attcccttct
     2881 ccctgatttt tcttcttaca aagaaaaatc tgtccctccc acaatgggag agggggtaac
     2941 tcaagaagga tttcaaaatg tcaaaacaaa ttaatgtgcc ggacatcggt tcggatgaag
     3001 tcagtgtgac tgaagtgatg gtaaaagttg gtgatactat ttcagtagat caatcaatta
     3061 ttaacgtaga aggcgataaa gcctctatgg aagtgccggc tcctgaagca ggtgtggtaa
     3121 aagaagtttt agtgaaagtg ggtgataaag tttcaaccgg ttcaccaatg ttaattttag
     3181 agtcagcaga tgctgctcct gctcaagaag caccaaaagc agaagcagct cctgctgctc
     3241 cagtagcaac aacttcagcc gttgttgaag taaatgtacc tgatatcggt ggcgatgaag
     3301 ttaacgtaac cgaaattatg gttaaagtag gtgatagcgt tgaagtggat caatctatca
     3361 tcaacgttga aggtgataaa gcctcaatgg aagtgcctgc accggttgcc ggcgtagtaa
     3421 aagaaatctt aatcaatgtg ggtgacaaag tttcaactgg taaattgatt atgaaatttg
     3481 aaacggcttc cgcagctaca gcacaatcta caccggttgc ggaagctgct ccagctcaag
     3541 cttcggcatc agcgattaaa gatgtaaatg taccggacat cggtggtgat gaagtaaacg
     3601 taactgaaat tatggttaaa gtgggtgatt ctgtttcaga agaacaatct ttaatcacgg
     3661 ttgaaggtga taaagcttca atggaagttc cggctccatt tgccggtgtg gtgaaagaaa
     3721 ttttagtgaa atcaggtgat aaagtttcaa ccggttcatt aattatgaaa tttgaagtag
     3781 cgggtgcggc accggctccg gcggctgctc aagcggcttc agctcctgct cctgctccac
     3841 aagcagcagc tccggcgaaa gctgacgcag ctccggcagg tcaaaaccaa tcaggtttaa
     3901 gccaagaaca agtggtggct tcagctggct atgcacacgc aacaccggta attcgccgtt
     3961 tagctcgtga gtttggtgta aacctagaca aagtaaaagg tacaggtcgt aaaggccgta
     4021 tcgttaaaga agatattcaa gcatacgtta aaacggctgt tcaagtattt gaaaaacaag
     4081 gcggaacagc agcggcagca acaggtgcgg caaacggtgc aggcttaggt ttattaccgt
     4141 ggccgaaagt agatttcagc aagtttggtg aagttgaaga agttgaatta agccgtatca
     4201 ataagatttc cggtgcgaac ttacaccgta actgggtaat gattcctcac gttacacatt
     4261 tcgatcgcac agacattacc gagttagaaa acttccgtaa agagcaaaat aaagaagcgg
     4321 aaaaacgtaa attagacgtg aaaattaccc ctgtggtctt cattatgaaa gcagtggcaa
     4381 gtgcattaga agccttccct cgtttcaaca gctcaatttc tgaagatgca caacgtttaa
     4441 ccttgaaaaa atacatcaat atcggggttg cggttgatac gccaaacggt ttagtggtgc
     4501 cggtgttcaa aaatgtgaac aaaaaaggca ttatcgaact ttctcgcgaa ttaatggaag
     4561 tctcgaaaaa agcccgtgaa ggtaaattga cagcatctga tatgcaaggt ggctgtttca
     4621 caatttcaag tttaggcggt attggtacaa cgcactttac gccaatcgtg aatgcaccgg
     4681 aagtggctat tttaggtgtg tctaaatctg aaatgcaacc gatttggaat ggcaaagagt
     4741 ttgaaccacg cttaatgctt ccgctttcat tatcattcga ccaccgtgtg atcgatggtg
     4801 ctgatggtgc gagattctta agctatatta atagcgtgtt ggcagatatt cgtcgtttag
     4861 tgatgtaatt cggtaaagct cctcctaaaa aagtccctct ttagaaaaga ggggtagggg
     4921 gagatttgat agacgtaatt tacgaagaga ataaattatt tggtagaaat ttgtgtttga
     4981 ttgattgctc tctcacttcg ctttatattc tgccaaatct cccttacccc tctttgctaa
     5041 agggggggaa taaaaagagg aaaaactatg agcaaagaaa ttaaaaccca agttgtcgta
     5101 cttggtgcag gtccagcagg ttactcagcg gcattccgtt gtgccgactt aggcttagaa
     5161 acagtaattg ttgagcgtta ttcaacctta ggtggtattt gcttaaacgt aggttgtatc
     5221 ccttctaaag cattattaca cgttgcaaaa gtaattgaag aagctaaaaa tgcagtacac
     5281 aacggtgtga cctttggtga gccaacgatt gatttagatc aggtacgtgc tggtaaagaa
     5341 gccgttgttt caaaattaac cggtggctta gcaggaatgg ctaaggctcg taaagtgaca
     5401 gtagtagaag gcttggctgc atttactggt ccgaatacgt tagtcgctcg tgatcgtgac
     5461 ggcaatccta caactatcac gttcgataat gcgattatcg cagcaggttc tcgtccgatt
     5521 caactaccat ttattccaca cgaagaccca cgagtttggg attcaaccga tgctcttaaa
     5581 ttaaaagaag taccgaaaaa actccttatt atgggtggtg gtattatcgg tttagaaatg
     5641 ggaacggtat ataacgcgct tggttcagaa gtggaagtgg ttgaaatgtt cgaccaagta
     5701 attcctgctg cagataaaga tgttgtagcg atttacacca aacaaatcga gaaaaaattc
     5761 aagctaatgc ttgaaaccaa agtaaccgca gtagaagcta aagatgacgg tatctatgta
     5821 tcaatggaag gtaaggcttg caacgatact aaacgttatg atgcggtatt agtcgctatc
     5881 ggacgtgtgc caaacggtaa attaattgat gccggtaaag ctggagtgga agtagatgag
     5941 cgtggcttta ttcgtgtaga taaacaaatg cgtaccaatg tgccacacat ctttgctatt
     6001 ggtgatattg tcggccagcc gatgttagct cacaaaggtg tacacgaggg acacgtggca
     6061 gcagaagtga ttgcaggaat gaaacattac ttcgatccga aagtcattcc gtccatcgct
     6121 tatactgaac cagaagtggc ttgggttggt aaaactgaga aagagtgtaa acaagaaggc
     6181 ttgaactacg aagtggcgaa attcccttgg gctgcttcag gtcgtgcgat tgcttctgaa
     6241 tgctcagaag gtatgaccaa gttaattttt gataaagata ctcaccgtgt attaggtggt
     6301 gcgattgttg gtagcaatgg tggcgaatta ttaggcgaaa tcggtcttgc aatcgaaatg
     6361 ggctgtgatg ctgaagatat cgcattaacc attcatgctc acccaacgtt acacgaatcg
     6421 gtaggattag cggcagaagt atttgaaggt tcaattacag acttaccaaa tgcgaaagcc
     6481 aaaaagcgtt aatcagatta ttt
//
LOCUS       DANLXD010000122         6467 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.123, whole genome shotgun sequence.
ACCESSION   DANLXD010000122 DANLXD010000000
VERSION     DANLXD010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6467
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.123"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..707)
                     /locus_tag="PXD18_002235"
     CDS             complement(<1..707)
                     /locus_tag="PXD18_002235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6302620.1"
                     /translation="MSIYRRKANGPWWVDITTPNGKRIKRSTRTLVKREAQQYHDKLK
                     QEMWAEDKLEEKRKYIFEDALLHYVRAAEELKDKATKKRHAEYWLSKFAGRELSSLTA
                     QEIILNIPKKNANTKKPLSHSTQNKYVKSLSRVLNIAHKLGMLDAVPHIPKKKEPPIR
                     VRWITKEQAKQLIDKLSSDWMKSICKFALMTGARRTEILTMTWDKIDLVRKVAIVTND
                     VAKSGKARSLLLNQEAI"
     gene            complement(611..934)
                     /locus_tag="PXD18_002236"
     CDS             complement(611..934)
                     /locus_tag="PXD18_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6302621.1"
                     /translation="MEHLTINQVAKELNCHPNTVRQHLADWGFFKMVGSEVWRINRED
                     LERAKKRAGIDPIRKRSDNDRGLSLSVEENEKCRSTDEKQTVRGGLISQPQTARELRE
                     ALARL"
     gene            complement(1015..1182)
                     /locus_tag="PXD18_002237"
     CDS             complement(1015..1182)
                     /locus_tag="PXD18_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HDL6302622.1"
                     /translation="MQFTYGSICSGIEATSIAWHGLGKPLWFSEIEPFPCAVLAHRFP
                     NVPNGNGMAVP"
     gene            complement(1190..1564)
                     /locus_tag="PXD18_002238"
     CDS             complement(1190..1564)
                     /locus_tag="PXD18_002238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302623.1"
                     /translation="MHIEDKIAWWLANGETGVSSKTMAFYLGYGIRPKIEGYPHDVSD
                     FRRCFLLLETVPFLRNRIEKMAELGKVWAALAKEWHTLEALYNEEECQIRCPKTYAKL
                     REILEANEENVVRIGNLSISIG"
     gene            1714..1941
                     /locus_tag="PXD18_002239"
                     /pseudo
     CDS             1714..1941
                     /locus_tag="PXD18_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609911.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
     gene            1966..2361
                     /locus_tag="PXD18_002240"
     CDS             1966..2361
                     /locus_tag="PXD18_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6302624.1"
                     /translation="MKIHTQIRKEILSLLEAKLTDIEHFYNGQPNFIDIDEQQLAISV
                     YLDEINRQELTLCDEQWTAQLNITIYLKSVDEAEDELDEWAEKIREVVETYSAFEHLE
                     GISLSQYQYEQDQNQRTWHSATLIFDVEY"
     gene            2393..3034
                     /locus_tag="PXD18_002241"
     CDS             2393..3034
                     /locus_tag="PXD18_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302625.1"
                     /translation="MAKTTKVQGTKFRIGIGREAQKAITAITLATATLTIATSGYKKG
                     DAIEITGCGQLDGIYPVLSVTGDQVKLCEEVNWTGKDLPANYTKAKAALVQYSDQFCA
                     VKNIEKSDDTLSTEDVTTVCSEGTETEPGEIEFGSIKLSFFHKPSTEMQTRLRKLFYD
                     KSTFAYKLELPDNHGTTYGEGFIEAGNGFSGEVKGKYEGSVSIKPSKRDYLLV"
     gene            3117..3518
                     /locus_tag="PXD18_002242"
     CDS             3117..3518
                     /locus_tag="PXD18_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302626.1"
                     /translation="MTLREKLLANKPKLQSIEINGETYYLREATVGDMNKQIFETRSW
                     LIQQAEQENVELPAEDDETFDEALNRFGEKYRLAQSVAYRLCDENGALLFNPLNIDDL
                     NAIAELDSKVIIDFNQAVSAPKDSASEESSK"
     gene            3563..3793
                     /locus_tag="PXD18_002243"
     CDS             3563..3793
                     /locus_tag="PXD18_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4035 domain-containing protein"
                     /protein_id="HDL6302627.1"
                     /translation="MPERHFAEYQLFYQEQPFGLWREDYRAAQLAHLTAMINRDPKGK
                     APELSEFMPFFNRADEVEANEDDGVADYLAKR"
     gene            3861..4127
                     /locus_tag="PXD18_002244"
     CDS             3861..4127
                     /locus_tag="PXD18_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="HDL6302628.1"
                     /translation="MATINDAFSFRTNTEIKNTAFDVIKNYGMTPSQVFNMFLTEIAK
                     TKTIPLSLNYQPNLETKLAMQEAKSGKNEVYASLEAFHKAMLAE"
     gene            4131..4400
                     /locus_tag="PXD18_002245"
     CDS             4131..4400
                     /locus_tag="PXD18_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin, RelE/StbE family"
                     /protein_id="HDL6302629.1"
                     /translation="MLQISPTNAYKRDFKKIAAELVGSSEYVEVMYCLINQLPLAEKY
                     RDHPLQGEWQGFRDCHIKPDLVLIYAVEDNLLRLVRLGSHAELFG"
     gene            4475..4738
                     /locus_tag="PXD18_002246"
     CDS             4475..4738
                     /locus_tag="PXD18_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302630.1"
                     /translation="MKNVLLFIVHFFLIAMLSIIPILIILGAIERDPYYTAWIFLSVF
                     LGIGALLYFATIVSKLINKGKTQTLEEKRYAEYWNNVKVNIPK"
     gene            4798..5508
                     /locus_tag="PXD18_002247"
     CDS             4798..5508
                     /locus_tag="PXD18_002247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HDL6302631.1"
                     /translation="MSGLGKLTVTLELENAKFQSAMTKSDYEAQKFAKNFIQNMDRAR
                     NHAKEFADRSTQYLKNIEQAAKNLNKNSEFSFLSTIGGHYQSMSSGILSAAKAYTDIQ
                     NKMKLVSGSSAEAAKRLTDVFDIATKTSQSTEAVSGVYQTFAQNAQSLGLAQKDVAEL
                     TKTVSQAVAASGASSSAASNALTQFGQSLLMGKMKAQEFNSLITQTPTIIQAMAKGLG
                     MTMAEFKAAVYRAKSLLG"
     gene            5486..5776
                     /locus_tag="PXD18_002248"
                     /pseudo
     CDS             5486..5776
                     /locus_tag="PXD18_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484718.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
     gene            5766..>6467
                     /locus_tag="PXD18_002249"
     CDS             5766..>6467
                     /locus_tag="PXD18_002249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDL6302632.1"
                     /translation="MKFSKYQLLVNKICFICGKKDCPQMKKSKDYKDFLDALEKGDVD
                     KADKIYNTKFSQFSKSFGHEMEKNLEKNRIPPIYQGVPFDSFDLYQHYSYGNGEALNL
                     SSVGLSNKIRPLVNKDKAFGKSNGSIESRFISQYKNEGRTSFSNAYDFTKEASGIADP
                     LWALGTATISGELKDIQIFPGGIARGNIHYSIRDRFTDPFDTFNFTKGEWNPNGTPYI
                     IQDSWIKSVRFSIDKK"
BASE COUNT         2055 a         1276 c         1250 g         1886 t
ORIGIN      
        1 ttaattgcct cttgattcag taatagcgat cgtgccttac ctgatttagc gacatcatta
       61 gtcacgattg ctacctttct tacaagatct atcttatccc aagtcattgt caaaatttct
      121 gtccgtctgg ctccagtcat caaagcaaac ttacagatag atttcatcca gtctgaactt
      181 aatttatcta ttagctgttt tgcttgttct ttggtgatcc agcgtacacg aattggcggc
      241 tctttctttt tcggtatgtg tgggactgca tccaacatac caagtttatg agcgatattt
      301 aatactctcg ataaagattt cacatactta ttttgcgtac tatgagatag aggctttttc
      361 gtatttgcat tctttttcgg gatatttagg ataatctcct gagctgttaa agagctgagt
      421 tcacgaccgg caaatttgga taaccagtat tcagcatgtc gcttttttgt ggctttatct
      481 tttaattctt cggccgcacg aacgtaatgg agcaaagcat cttcaaagat atattttctc
      541 ttttcctcga gtttatcctc tgcccacatt tcttgcttga gtttatcgtg atactgctga
      601 gcttcacgtt ttacaagcgt gcgagtgctt ctcttaattc tcttgccgtt tggggttgtg
      661 atatcaaccc accacggacc gtttgctttt cgtctgtaga tcgacatttt tcattctcct
      721 cgaccgacag agataaccct cggtcattat cagatcgttt tcttattggg tcaataccgg
      781 ctctcttttt tgctctttcc aaatcttctc ggttgatccg ccaaacttcc gagcctacca
      841 ttttaaaaaa tccccaatcc gccaaatgtt ggcggactgt atttggatgg caatttaatt
      901 cttttgccac ttgattaata gtaagatgtt ccattcatta ctttctccaa aataaatccc
      961 tctaaacgag ggattgtact aaataatcgt taagtctttg ccttatccac tgcatcaagg
     1021 cacagccata ccgtttccat ttggcacatt ggggaaacgg tgagctaata ccgcacaggg
     1081 gaatggctca atttcagaga accacaaagg cttacctaaa ccgtgccacg ctatacttgt
     1141 agcttcgata ccgctacaaa ttgagccgta ggtgaattgc attttttacc tatcctatcg
     1201 aaatactcaa attcccaata cggacaacat tttcttcgtt ggcttctagg atttctctca
     1261 acttagcata ggttttgggg catcttattt gacattcctc ttcgttgtag agagcctcta
     1321 atgtgtgcca ttcttttgca agtgcagccc aaactttccc aagttcagcc attttttcaa
     1381 tcctatttcg caaaaaaggg actgtctcca acaacagaaa gcaacgcctg aaatccgata
     1441 catcgtgtgg gtagccttct atttttggtc ttattccgta accaaggtaa aaagccattg
     1501 ttttactgct tacccctgtc tctccattgg caagccacca agcgattttg tcttctatgt
     1561 gcatttttcc tccaaaaatt aaccgcttgc ggaacaagtt ctacaagcgg ttgtcaagtg
     1621 ttcatttgtt caatgaacag ttcattgtga ataacaaaac cgcttgaatt acaagcggtc
     1681 tattttgttg cgtaaattta ctgttagcgt tgagccataa ccgactacga ccgctggccc
     1741 gaagatattg acggcgaggg ggacggcttc tcgcttgcct ccaaacggac gaccactttt
     1801 atgtcagccg gaatgacttt agtggagagt tcgcctggta aagatattgt cgatctcaaa
     1861 catatcccga aaagtagcca cgaagcccca ccgactaccg gtattttaag cctctacaat
     1921 cgaggcgacc gcagacgctt tagcgaaaca gttgataggt aagctatgaa aatccatacc
     1981 caaatccgaa aagaaatcct ttcattatta gaggcaaaat taacggacat cgagcatttt
     2041 tataacgggc aaccgaattt cattgatatt gacgaacagc aacttgccat ctctgtttat
     2101 cttgatgaga ttaaccgtca ggagcttacc ttatgcgatg aacagtggac agctcaactt
     2161 aacatcacga tttatctaaa atcagttgat gaggcagaag atgaattaga tgagtgggcc
     2221 gaaaaaatcc gtgaagtggt tgaaacatat tctgcgtttg aacatttaga gggcatcagc
     2281 ctttctcaat atcaatacga acaagatcaa aatcaaagaa cttggcactc agccacattg
     2341 atttttgatg ttgaatacta acaagcaaat aatccttata ggagaatcta caatggcaaa
     2401 aacaacaaaa gtccaaggca caaaatttag aattggcatt ggacgtgaag cccaaaaggc
     2461 aattacggct atcactttag ctacagcaac gcttactatt gccacatcag gctataaaaa
     2521 aggcgatgca atcgaaatta ccggttgtgg tcagttagac ggcatttatc ctgtattatc
     2581 tgtaacaggc gatcaagtca aattgtgcga agaagtaaac tggacgggta aagatttacc
     2641 ggctaattac accaaagcca aagcagcttt agtacaatac tcagaccaat tctgtgcggt
     2701 aaaaaacatt gaaaaatctg atgatacgtt aagtaccgaa gatgttacaa cggtctgctc
     2761 ggaaggtaca gaaaccgaac ccggagaaat tgaatttggc tcaattaaac tgagcttttt
     2821 tcacaagcca agtacggaaa tgcaaactcg cttacgcaaa ttgttttatg acaaatccac
     2881 ctttgcgtac aaattagaat tacctgataa ccacggcaca acctatggcg aaggtttcat
     2941 tgaggcgggt aacggcttta gtggcgaagt taaaggcaaa tatgaaggct cggtatcaat
     3001 taaaccaagc aaacgtgatt atttgctagt gtaattacaa aatattgctc caaatcgacc
     3061 gcttgtaata ttgcaagcgg tcttttttat cctaaatttt acaaaaggaa tcgacaatga
     3121 cactccgtga aaaactcctc gccaacaaac caaaattaca atctatcgaa atcaacggtg
     3181 agacctacta cctgcgtgaa gccactgttg gcgatatgaa taagcagatt tttgaaaccc
     3241 gaagctggct cattcaacaa gctgaacaag aaaatgttga attaccggca gaagatgatg
     3301 aaacctttga cgaagctctc aaccgttttg gcgaaaaata ccgccttgct caatcggttg
     3361 cctaccgttt atgtgacgaa aacggtgcat tactgtttaa cccacttaac attgacgatc
     3421 tcaatgcgat tgccgaatta gacagtaaag tgattatcga ctttaaccaa gccgtgtccg
     3481 ccccaaaaga ctcagcgagc gaagaaagtt ccaaataacc ctttcgctcg cactgggtaa
     3541 aacccttgaa gaaatcgaac aaatgcctga acgccacttt gccgaatatc agctttttta
     3601 tcaagagcaa ccttttgggc tttggcgtga ggactatcgt gctgctcaac ttgcccactt
     3661 aaccgcaatg atcaaccgtg acccaaaagg caaagcccct gaactctcgg aatttatgcc
     3721 gttttttaat cgggctgatg aagtagaagc aaatgaagat gatggcgttg cggattattt
     3781 ggcgaaaagg taaatctctt gtatttcatt gtaattctgt ctataattgg tgtaatacat
     3841 agaaatacag gagagataaa atggcgacta tcaatgatgc tttcagtttt agaacaaata
     3901 ccgaaataaa aaataccgca tttgatgtaa ttaaaaacta tggaatgaca ccctctcagg
     3961 tgtttaatat gtttttaacc gagattgcaa aaacgaaaac tattccgtta agtttgaatt
     4021 atcaacccaa tcttgaaaca aaattggcaa tgcaagaagc aaaatcaggt aaaaatgaag
     4081 tttatgcctc acttgaagca tttcataaag caatgttagc ggagtaaata atgctacaaa
     4141 tttcgccgac aaacgcatat aaaagagact ttaaaaagat tgcagccgaa ttagtcggta
     4201 gttcggaata tgtggaagta atgtattgcc taataaacca attaccattg gcggaaaaat
     4261 atagagatca cccactacaa ggtgaatggc aaggctttag agattgccat attaagcctg
     4321 atttagtgtt gatttacgct gttgaagata atctgctccg ccttgttcgt ttaggatcgc
     4381 acgctgaatt atttggataa tttctgtaaa aactaaccgc ttgcgatttt gtgctgtggg
     4441 cggtatagtt ggaatattaa caaaggaggg aaaaatgaaa aatgtacttc tatttatcgt
     4501 acactttttc ttaatcgcaa tgctctcaat tatcccaata ttaattattc ttggagcaat
     4561 cgaaagagat ccttactata ctgcgtggat tttccttagc gtatttttag gcattggagc
     4621 attgttatat tttgcaacca ttgtttctaa gttaattaac aagggaaaaa cacaaacatt
     4681 agaagaaaaa cgatatgcag aatattggaa taatgtaaaa gtcaatattc ccaaatagtc
     4741 taactgataa atgaccaaaa gctcgcttta tgcgggcttt tttattggag aaaaacaatg
     4801 agtggcttag gaaaattaac cgttacctta gagcttgaaa atgcaaaatt tcagtccgca
     4861 atgacgaaat ctgattatga ggcacaaaaa tttgccaaga actttatcca aaatatggat
     4921 agagctagaa atcacgccaa agaatttgcc gatcgctcaa cccaatattt aaaaaacatt
     4981 gagcaagcgg caaagaacct caataaaaat tctgaatttt catttttatc gactattggt
     5041 ggacattatc aatcaatgtc tagtggcata ttgagtgcgg caaaagccta tactgatatt
     5101 caaaataaaa tgaaattagt aagcggtagt tcagcagagg cagctaaacg attaactgat
     5161 gtgtttgata ttgcgactaa aacaagccaa agtacagagg ctgtttcagg tgtctatcaa
     5221 acatttgctc aaaatgccca atctctcgga ctggctcaaa aagatgtagc agaattaact
     5281 aaaacggtct ctcaagccgt tgctgcaagc ggcgcaagca gttctgcagc aagtaatgcc
     5341 ctaacccaat ttggtcaatc acttttaatg ggcaaaatga aagcccaaga atttaactcg
     5401 ctcattactc aaaccccaac cattattcaa gcaatggcaa aaggtttggg aatgacaatg
     5461 gcagaattta aagcagcggt ataccgggca aaatctttac ttggataaca ttcaagggca
     5521 aggttttgag agagtggata caccccaaat cggcgatgtg attttaatac aggtcggttc
     5581 tgatgtgccg aatcacgcag cgatttatat tggtgaacaa atggtaatcc accatagccc
     5641 gaaccgatta tctaagcgtg atttatatga cggttattgg ttacgccata cccacagtat
     5701 ttggcggcat aaactggcgg atagattgga ttttgacggc atatttaatg atataggaga
     5761 acaatatgaa atttagtaaa tatcaattat tagttaataa gatctgcttt atttgtggta
     5821 aaaaagattg tccacaaatg aaaaagagta aagactacaa agactttttg gatgctttag
     5881 aaaaagggga tgttgataaa gcagataaaa tatacaatac gaagttttca cagttttcta
     5941 aatcttttgg tcatgaaatg gaaaagaatt tagagaaaaa tcgtatacct cctatttatc
     6001 agggagttcc atttgattct tttgacttat atcagcatta ttcttatggt aatggagagg
     6061 cattaaatct ttcatccgtt ggattaagta ataaaattcg tcctctagtg aataaagata
     6121 aagcatttgg taaatccaat ggaagtatag aaagccgatt tatttcgcaa tataaaaatg
     6181 aaggacgcac atctttctcc aatgcttatg attttacaaa agaagcatcg ggtattgcag
     6241 atccgttatg ggcgttagga acagctacca ttagtggaga attgaaagat atacaaattt
     6301 ttcccggtgg tattgctagg ggaaatatcc attatagtat cagggacaga ttcactgacc
     6361 catttgatac attcaatttt actaaaggag aatggaaccc aaatggaaca ccttatatta
     6421 ttcaagatag ctggataaaa tcggtacgat tttcgataga caagaag
//
LOCUS       DANLXD010000123         6240 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.124, whole genome shotgun sequence.
ACCESSION   DANLXD010000123 DANLXD010000000
VERSION     DANLXD010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6240)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6240)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6240
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.124"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            67..915
                     /locus_tag="PXD18_002250"
     CDS             67..915
                     /locus_tag="PXD18_002250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDL6302633.1"
                     /translation="MEKKALFRGFLLSTVALAVAACGNLSKVSDEGTTENPVFPKISE
                     SEFNHDGSQFGSWPNWENVRQIEKGMNKDQLYNLIGRPHFEEGLYGVREWDYAFNYRE
                     NGVHKICQFKILFDKNMNAQSFFWYPNGCNGNSSFALTGDFLFDFDKATLTTKGKEVV
                     DNVAQQLKASKAQQVKVAGYTDRLGSAAYNLDLSQRRSNTVKARLVQQGVTAQIEAVG
                     YGKANQVKACDGETGQALKDCLRPNRRVEISANCGVMKQNEGGNVAGPNGPAPLYQTP
                     AYDGSK"
     gene            1003..1821
                     /locus_tag="PXD18_002251"
     CDS             1003..1821
                     /locus_tag="PXD18_002251"
                     /EC_number="3.1.3.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphatase"
                     /protein_id="HDL6302634.1"
                     /translation="MNYQAIAFDLDGTLLSSNATILESSKEAIKKVREKGIKVYFVTG
                     RHHTAVRPYYVELGLDTPVVCCNGTYVYDFKNEKVLSGNPLSAEIASKLVNDAQAQGI
                     HTAVYFEDAMTYESLNIHFTKFQKWVESCAPEVRPNVYQVENFQQEIDKGVTVWKVLI
                     SDPDLAKMQKFVEKLPPDQVSPEWSWVDRVDITSVGNSKGARLAEVLKTEGIDLQKVI
                     AFGDNFNDVSMLETVGLGIAMGNSEPDIQQKAKKTIGSNNEDSIANELKAQFNL"
     gene            1824..3515
                     /gene="narQ"
                     /locus_tag="PXD18_002252"
     CDS             1824..3515
                     /gene="narQ"
                     /locus_tag="PXD18_002252"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarQ"
                     /protein_id="HDL6302635.1"
                     /translation="MIKAKYSIARRIGLYFLIMIGFASIISGISLGIMWSNKSDASLI
                     NVSGSLRMQSYRLLSEMDSKKALLPERLLEYHRTLHATELSSLKQSVLLPDSVIESYQ
                     QLLKDWYEMQSYVAQGDKVNYASHIEDYVQRVDDFVFRLQEFAELKLKIATGVIAIAM
                     LLIIALAYIGVWYTRKKIIGPLRQLVKASWQIQNKDFDHVKLAVNEPNELGLLSSTFT
                     EMSNELLKLYTSLEDKVQDKTRRLLAVNRSLLVLYQCSQLLTAKPINKEVLNQVLKTV
                     FDNEHLLGIDLQVYGAEYWNVSIDNKPSLDWVSAEIAIENEKLGILSWKPSLVCPGER
                     LIQNVSEMIGRSLYVVQMQKQQQQLVLMEERAIIARELHDSLAQSLTFFKIQVSLLKL
                     AKTDEKRNEILTVFEKALNDAYSQLRELLTTFRLTIQEANLQQALEKILESLRPKTSA
                     QIRLSCKLPSHMFNAQQQVHVLQIVREAVINAIKHSQATEINVIAETNDDGEHCLTIQ
                     DNGVGLAAHTQPEGHYGLTIMQERAAELKAEFSIENVESGGVKVQVLLPSMISKR"
     gene            3566..4084
                     /locus_tag="PXD18_002253"
     CDS             3566..4084
                     /locus_tag="PXD18_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDL6302636.1"
                     /translation="MQFRKAVEADFETILAIYNQAIPTHQITADLELATTQNRRKWFD
                     FHLETAQYPIWVVEDEKGIAGWFSFSPFYERPAFLHTSEISIYLDRYSKGKGYGSKII
                     EFMQAEMLNHNIHTLMAYVFELNTVSQNLMRKHGFEQWGRFPNIANMGKDEKGEDKWR
                     TLLMMSYQKGIE"
     gene            4127..4726
                     /gene="rdgB"
                     /locus_tag="PXD18_002254"
     CDS             4127..4726
                     /gene="rdgB"
                     /locus_tag="PXD18_002254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HDL6302637.1"
                     /translation="MEKTKIVLATSNADKVKEMADVLSQFGFEVVAQSEFGIESPEET
                     GLTFVENALIKARFAAKMTGLPAIADDSGLSVMALGGEPGLYSARYAGEQATDADNRQ
                     KLLAKMQGQENRLAKFVSCIVFLKHETDPTPYIASGECFGEILTEERGENGFGYDSLF
                     FYPPKACTFAELETKEKKAISHRAIALEQLKQQLAGENK"
     gene            4723..5043
                     /locus_tag="PXD18_002255"
     CDS             4723..5043
                     /locus_tag="PXD18_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjQ family protein"
                     /protein_id="HDL6302638.1"
                     /translation="MIITTTPTIEGKQIVEYKGLVFGEVVSGANFIRDFLAGITDIIG
                     GRSGAYESKLNGARKEALAELAKEAQKVGANAVVGVSMEYQSMGGDKGMFIVVATGTA
                     VVIR"
     gene            5047..5499
                     /locus_tag="PXD18_002256"
     CDS             5047..5499
                     /locus_tag="PXD18_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HDL6302639.1"
                     /translation="MQFEQHFEANFWQNKSLLEMNDAEWEALCDGCGKCCYRKYIQGR
                     GRRERLYYTSVACNLLDVNTGRCMNYSNRFKIESDCTKLTKKNLPDFGWLPKTCAYRL
                     LYEGKPLFDWHPLISKDPDSVKNAGMLIANGIHEKDVIDWFEFVIDEV"
     gene            complement(5540..6121)
                     /gene="lpcA"
                     /locus_tag="PXD18_002257"
     CDS             complement(5540..6121)
                     /gene="lpcA"
                     /locus_tag="PXD18_002257"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDL6302640.1"
                     /translation="MYLEQIKAELQEAADVLDKFMSDEKNIKLIQDAAMLIANSFKQG
                     GKVISCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHLSCVSNDFGYEYVFS
                     RYLEAVGQKGDVLFGLSTSGNSKNVLNAIKVAKEKGMKVIAMTGKDGGQMAGLADVEI
                     RVPHFRYADRIQEIHIKVIHILMMLIEFEMEKA"
BASE COUNT         2026 a         1013 c         1336 g         1865 t
ORIGIN      
        1 tgcaacttta ataggttgtg aagctatttt tttatacaga ttactataag gaaacttaat
       61 atgaaaatgg aaaaaaaagc ccttttccgt ggatttttat tatcgacagt ggcattagca
      121 gtggctgctt gtggtaactt aagtaaagtg agtgatgaag gaacaactga aaacccggta
      181 ttcccgaaaa tctcagaatc tgaatttaac cacgatggtt cacaatttgg ttcatggcca
      241 aactgggaaa acgttcgtca aattgaaaaa gggatgaaca aagatcaatt atataatcta
      301 attggtcgtc ctcattttga agaaggctta tatggtgttc gtgaatggga ctatgcattc
      361 aattaccgtg aaaatggcgt acataaaatt tgccaattta aaattttatt cgataaaaat
      421 atgaatgcac aaagtttctt ctggtatcca aatggatgta atggaaactc atcatttgct
      481 ttaactggcg atttcttatt cgatttcgat aaagcgactt taactacaaa aggtaaagaa
      541 gttgttgata atgttgctca acaattaaaa gcatctaaag cacaacaagt taaagtagca
      601 ggctatacag accgtttagg ctctgctgct tataacttag acttatcaca gcgtcgttct
      661 aatacagtta aagctcgttt agtacaacaa ggcgttacag cacaaattga agcggtaggt
      721 tatggtaaag cgaatcaagt aaaagcttgt gatggtgaaa ctggtcaagc attaaaagat
      781 tgtttacgcc ctaaccgtcg tgttgaaatt tctgcaaatt gtggtgtaat gaaacaaaat
      841 gaaggtggca atgttgcagg tcctaatggt ccggctccac tttatcaaac cccagcatat
      901 gatggcagta aataatttct agttttgact aacttagagt agaatattaa ggcaaccaaa
      961 tggttgcctt ttcttttatc tatttattta taggggaata ctatgaacta ccaagctatt
     1021 gcatttgatt tagacggaac actactttca tcgaacgcaa caattttaga atccagtaaa
     1081 gaggctatta aaaaggtaag agaaaaggga attaaagtct actttgttac cggtaggcac
     1141 catactgcgg ttcgccctta ttatgtagaa ctagggctgg atacgccagt tgtgtgttgc
     1201 aatggcactt atgtgtatga ttttaaaaat gaaaaagtat taagcggtaa tccgttatca
     1261 gcagaaattg cttcaaaatt agttaatgat gcacaagctc aagggattca tactgcggtt
     1321 tattttgaag atgcaatgac ttatgagtct ttgaatattc acttcactaa attccaaaaa
     1381 tgggttgagt cttgcgcacc agaagttcgt ccgaatgttt atcaggtaga aaatttccaa
     1441 caagaaattg ataaaggtgt aaccgtatgg aaagtgctta ttagcgatcc agatcttgcc
     1501 aaaatgcaaa aatttgttga aaaattaccg cctgatcaag taagcccgga atggtcttgg
     1561 gttgataggg ttgatattac cagtgttggt aacagcaaag gggcaagatt agcggaagta
     1621 ttaaaaacag aaggtattga tttacaaaag gtgattgcct ttggcgataa tttcaatgat
     1681 gtttctatgc tagaaaccgt tggattaggc attgcaatgg gaaattcaga accagatatt
     1741 cagcaaaaag cgaagaaaac tataggttca aataatgaag atagtattgc taatgaattg
     1801 aaagctcaat ttaatcttta attatgataa aagcaaaata ctctattgct aggcggatag
     1861 gactctattt tttaattatg atcggatttg cttcgattat cagtggaatc tcacttggta
     1921 ttatgtggag caataaatct gatgcgagcc tgattaatgt ttcaggctca cttcgtatgc
     1981 aaagttatcg attgttatca gaaatggatt caaaaaaagc gctgctacct gagcgattgt
     2041 tggaatatca tcgaacgcta catgctacag agcttagttc attaaagcaa agtgttttat
     2101 tgccagatag cgtgatagaa agctatcaac aattacttaa agattggtat gaaatgcaat
     2161 cttatgtcgc tcagggagat aaagttaatt atgcttcgca cattgaagat tatgtgcaga
     2221 gagttgatga ttttgttttc cgcttacaag agttcgctga gttaaaatta aagattgcaa
     2281 caggcgtgat tgcgattgca atgttactga ttattgccct tgcttatatt ggcgtttggt
     2341 atactcgaaa aaagattatt ggacctttaa ggcaattggt aaaagcgagt tggcaaattc
     2401 aaaataaaga ttttgaccac gtaaaattag cggttaatga acccaatgaa ttagggctac
     2461 tttcctctac ttttactgag atgtctaatg aattattaaa attatatact tcattagaag
     2521 ataaagttca ggataaaaca cgtcgtttat tggcggtaaa tcgttcttta ctggtattat
     2581 atcaatgctc tcaattatta actgctaagc cgattaataa agaagtgtta aatcaagtac
     2641 ttaaaacggt atttgataat gaacatttgc tagggattga tttacaagta tatggggctg
     2701 aatattggaa tgtatcaata gacaataaac caagtttaga ttgggtttct gctgaaattg
     2761 caatagaaaa tgaaaaattg ggtatcttaa gctggaaacc ctcactggtt tgtcctggtg
     2821 aacgattgat ccaaaatgtg tcggaaatga ttggtcgtag cctttatgta gtgcagatgc
     2881 aaaagcaaca gcaacaattg gtactcatgg aggagcgtgc aattattgct cgtgagttac
     2941 acgattcctt agcccaatct cttacgtttt tcaaaattca ggttagcctg cttaagcttg
     3001 ctaaaacaga tgaaaagcgt aatgaaattt taactgtatt tgaaaaagcg ttaaatgatg
     3061 cttacagcca attaagggag ctgttgacga cgtttaggct aacgattcaa gaagcgaatt
     3121 tacaacaagc gttagaaaaa attttagaaa gcttaagacc gaaaacctca gcacagattc
     3181 gcttaagttg caaattacct tcgcatatgt ttaatgctca gcagcaagtt cacgtattgc
     3241 aaattgtacg agaagctgtg attaatgcta ttaagcattc gcaagccact gaaattaatg
     3301 tgattgctga aacaaatgat gatggtgaac attgtttgac tattcaagat aatggcgtag
     3361 ggcttgctgc ccatacgcaa ccagaagggc attatggact gacgattatg caagaacggg
     3421 cggctgaact caaagccgaa ttttcgattg aaaatgtgga aagtggcgga gtaaaagtac
     3481 aggttttatt gccgagtatg attagcaagc ggtaataaaa tattaatttt ttgcgtatta
     3541 ttggcaacga ataaaaggat aacaaatgca attccgaaaa gcagtagaag cggattttga
     3601 gacaatattg gcaatttata atcaagcaat tcccactcac caaattaccg ccgatttaga
     3661 actggcaact acgcaaaatc ggcggaagtg gttcgatttt caccttgaaa cagcccaata
     3721 tcctatttgg gtggtcgaag atgaaaaagg cattgctggc tggtttagtt tttcaccatt
     3781 ttatgaaaga ccggcatttt tacatacttc ggaaatcagt atctatttag accgctattc
     3841 caaaggaaaa ggctatggct caaaaattat tgagtttatg caagctgaaa tgcttaatca
     3901 caatattcat acgttgatgg cgtatgtgtt tgaattaaat acagtgagcc aaaatctaat
     3961 gagaaaacac ggctttgaac aatggggaag atttccgaat attgctaata tgggaaaaga
     4021 tgagaaaggt gaggataaat ggcgaacgtt gctgatgatg tcttaccaaa aaggtatcga
     4081 ataacaagcg gtgatttttt agaatatttt tgcaaataag gacaatatgg aaaagacaaa
     4141 aattgtactt gcaacaagta atgcagataa agttaaagaa atggcagatg tactctcaca
     4201 atttggtttt gaggtggtgg ctcaaagtga atttgggatt gaatcaccgg aagaaaccgg
     4261 tttgactttt gttgaaaatg cgctgattaa agcacgattt gctgctaaaa tgacaggttt
     4321 accggcgatt gccgatgatt caggtttatc ggttatggca cttggtggtg aaccggggct
     4381 atattctgca cgttatgccg gagagcaggc aaccgatgcc gataatcgcc aaaaattact
     4441 agccaaaatg caagggcaag agaatcgtct ggcgaaattt gtcagttgta tcgtgttttt
     4501 aaaacacgaa actgacccaa caccttatat tgcgtcgggt gaatgtttcg gtgaaatttt
     4561 gacggaagaa agaggtgaaa atggtttcgg ctacgattcc ctgtttttct acccaccgaa
     4621 agcttgcact tttgccgaat tagaaaccaa agagaaaaaa gcgatttcac accgtgcaat
     4681 cgcactagag caattaaaac agcaattagc aggagagaat aaatgattat tacaactaca
     4741 cctacgatag agggtaaaca aattgtagaa tacaaagggt tagtatttgg cgaagtagtt
     4801 tctggggcta attttatccg tgatttctta gccggtatca ccgatattat tggcggacgt
     4861 tcaggtgctt atgaaagcaa attaaacggt gcaagaaaag aggcattagc tgaattagct
     4921 aaggaggcac aaaaagtggg ggcaaatgcg gtggttggcg tttctatgga gtatcaatca
     4981 atgggcggcg ataaaggaat gttcatcgtg gtagcgactg gtactgcggt tgtaatacgt
     5041 taatttatgc agtttgaaca acactttgaa gcaaatttct ggcagaacaa atcgctactt
     5101 gaaatgaatg atgctgaatg ggaagcatta tgtgacggtt gtggtaagtg ctgctaccgg
     5161 aaatatattc agggaagagg gcggcgtgaa cggctttact atacctcggt tgcctgtaat
     5221 ttattagatg tgaatacagg ccgttgtatg aattactcga accgttttaa aattgagtcg
     5281 gattgtacaa aattaactaa aaagaactta cctgattttg gctggttgcc aaaaacctgt
     5341 gcttatcgtt tactttatga aggaaagcct ctttttgatt ggcacccttt aatctctaaa
     5401 gatcctgatt ctgtaaaaaa tgccggaatg ctgattgcta acggtattca cgaaaaagat
     5461 gtgattgatt ggtttgagtt tgttattgat gaagtatgag aaaaaggcgt ttggtgcaaa
     5521 cgcctttttg ttatagagat taggcttttt ccatctcaaa ttcaattaac atcatcaaaa
     5581 tatgaatcac tttaatgtga atttcttgga tgcggtctgc gtaacggaaa tgaggtactc
     5641 ggatttccac atcggctaat cctgccattt gcccgccatc tttgccggtc attgcaatca
     5701 ctttcatgcc tttttctttg gcaactttga tcgcatttaa cacattttta gagttaccag
     5761 aggttgatag accaaagagt acatcgcctt tttgcccaac ggcctctaga taacgagaga
     5821 agacatattc ataaccgaag tcattactta cacagcttaa atggctgaca tcggaaatag
     5881 cgattgccgg gtatccggga cggttttcac ggtaacgacc tgttaattct tcggcaaagt
     5941 gcatcgcatc acagtgcgaa ccgccattac cgcaagaaat caccttacca ccttgcttga
     6001 aactatttgc aatcagcatg gcggcatctt gaattaattt aatatttttt tcatcagaca
     6061 taaatttgtc taatacatct gcagcttctt gaagctcagc tttaatttgt tctaaataca
     6121 tcatttgctc ctttgtttgc aaaacgctta cctttaaaca tcggctttac caatgggggt
     6181 agcgagtaaa aaattcgttt tttatgaccg cttgaggcat aaaaagtgca ataagtttag
//
LOCUS       DANLXD010000124         6127 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.125, whole genome shotgun sequence.
ACCESSION   DANLXD010000124 DANLXD010000000
VERSION     DANLXD010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6127)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6127)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6127
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.125"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..436
                     /locus_tag="PXD18_002258"
     CDS             <1..436
                     /locus_tag="PXD18_002258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HDL6302641.1"
                     /translation="ILSLILGLSAAAIGSYPAIKEIGEERAKKHQDILDLNRELYSAM
                     VNRDFSALQTLLSDDFELYSSTGEVIDKQEWIKLIQKRVLEFDKVDLLSTDFQGNQSS
                     GLLRVNGEFFGIERDNVVVEMNIRTIVRNTERQIKCIVIKEV"
     gene            449..1342
                     /gene="murQ"
                     /locus_tag="PXD18_002259"
     CDS             449..1342
                     /gene="murQ"
                     /locus_tag="PXD18_002259"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HDL6302642.1"
                     /translation="MNALGQMITEQRNPNSMNIDRLSALDIVQVINQEDKQVAIAVEQ
                     CLPQIAQAVEKIVQAFEKGGRLVYVGAGTSGRLGVLDASECPPTYGVKPEMVVGLIAG
                     GERALRFPIEGAEDNREQGKVDLQAVNFSEKDVLVGIAASGRTPYVLGAMEYAKQLGA
                     TTVSIASNPNSAMAQIADIAIETVVGPEVLTGSSRMKSGTAQKLVLNMLTTASMILIG
                     KCYQNLMVDVQATNEKLKARAIRIVMQATECEREVAEDTLKLAENNAKLAIMMILGNL
                     DKQKAEDLLSQNQGRLQKALK"
     gene            complement(1426..2370)
                     /gene="prmB"
                     /locus_tag="PXD18_002260"
     CDS             complement(1426..2370)
                     /gene="prmB"
                     /locus_tag="PXD18_002260"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDL6302643.1"
                     /translation="MFKYNTELLDEISALPIVNDLVTIQDMMRWGYSYFNASDLYYGH
                     GYDNAWDEAQQLVLAGLYLPFDVPETLYSSRLTRVEKERIINLICERLGSRKPVAYLT
                     NSAWFCGGEYYVDERVIVPRSPIGELIKKGFKGIIKNEPHRILDMCTGSGCIAIACAE
                     RFPEAEVDAVDLSLDALDVAQINIERHQVSHRVFPICSDLFNNLPQDKYDLIVTNPPY
                     VDEEDLGDMPEEFHHEPALALGSGKDGLDLTKRILAQAADYLNDDGVLVCEVGNSMVH
                     LIEQFPSVPFNWLEFEHGGLGVFSLTKEELVKHRHLFA"
     gene            2463..3008
                     /gene="smrB"
                     /locus_tag="PXD18_002261"
     CDS             2463..3008
                     /gene="smrB"
                     /locus_tag="PXD18_002261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease SmrB"
                     /protein_id="HDL6302644.1"
                     /translation="MNDTLLDDEFALFREAAKGTKKLTQNTFVPKAEPRKKLQELREL
                     KEKADTEFYFSDEYEPLLKEENEKVKYLREDVDPYILKQLRRGDFQPELFLDLHGLTR
                     EKAKKELAALILACEREKVYCASVMTGFGTRTLKDQIPRWLVQHPKVMALHQAPKEWG
                     GDASILILVEQPENPEKMFGR"
     gene            3072..3557
                     /locus_tag="PXD18_002262"
     CDS             3072..3557
                     /locus_tag="PXD18_002262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/prolyl-tRNA synthetase associated
                     domain-containing protein"
                     /protein_id="HDL6302645.1"
                     /translation="MSEQTFHQLTALLDSHRARYRVVGHPSAGKSEEVAKIRGTEIGQ
                     GAKALVCKVKGNGVKQAVLAILPADYQADLTKIAEHLGGLRASLASPAEVAELTDCVF
                     GAIPPFSFHPDLLLVAEPSLFERYAELAFNAGTLERSIILNTEDYQKIVNPVLVQFAK
                     S"
     gene            complement(3559..4308)
                     /locus_tag="PXD18_002263"
     CDS             complement(3559..4308)
                     /locus_tag="PXD18_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDL6302646.1"
                     /translation="MEKRFEINEQGLSIRCKLFYEKELQQIENVVIVLHGFGSSKDLK
                     SNTKFGERLSSKYKGYAALAFDFPCHGDDARKKLSVEESITYLQLVIDYAKTSLNAKN
                     LYAYGTSFGGYLTLKYLAEKGNPFRKIALRAPAVQIYHSLMNRLSEEERQKLAKGREI
                     LWGFDRQMKISQAFFDELTDITQNDYLDYAEQILILHGTEDEMVALSTSQQFADNNVI
                     ELLPIEGADHAFSNPKLMDIAIGKIVEFFAP"
     gene            4480..5343
                     /locus_tag="PXD18_002264"
     CDS             4480..5343
                     /locus_tag="PXD18_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HDL6302647.1"
                     /translation="MLQLILAILCSVTVGVLIKFARQKGIRIDQSIAVNYIVTTTMTF
                     LLLKPDYQGQSITDIIANNPTSYIFVILSITLPTIFLVQAKALEFAGIIRTDAAQRLS
                     LFLPILAAFTIFGEQVTQNKLIALLLAFVALGCLLWKGNQGMEKGGKIAIISLALVWV
                     GYGVNDILFKQIAKSGSAFPVTLSIAFIGAGCFMFIYLLLKRTQWHVPSVLTGLLLGV
                     LNFGNILFYIQAHQAMKDDPTLVFTGMNLGVICLGTFVGAFFFKEKIHKVNYLGVAIA
                     IVAIICLFYWR"
     gene            5467..6060
                     /locus_tag="PXD18_002265"
     CDS             5467..6060
                     /locus_tag="PXD18_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302648.1"
                     /translation="MKLKALSTLIASSMLYSQSFAVPPEKTAEEPQPFFNKTESGYDL
                     VFNDQNYRLIETELNGEKIQFRAFERIVYVNNPIEPDYQTINLYVPEAYYNNGEINGY
                     QADTAPIFLPNSVGGYMPAKAASYDKKRRDGSPGTILVALSKGYVVASVGARGRTLQK
                     EGKYTGKAPSAIIDSKSAAHKACRFESDHWHHSLCKI"
BASE COUNT         1844 a         1181 c         1381 g         1721 t
ORIGIN      
        1 tattttatct ttaatattag ggctttctgc ggcagcgatt ggaagttatc cggcaataaa
       61 agagattggc gaggagcggg caaaaaaaca tcaagatata ttagatttaa atagagaact
      121 ttatagtgca atggtgaacc gtgatttttc ggctttgcaa acattactaa gcgatgattt
      181 tgagctttat tcatcaacag gtgaagtgat tgataagcaa gaatggatca aattaatcca
      241 aaagagagta ttggaatttg ataaggttga tttgctatct accgattttc aggggaatca
      301 atcatctgga ttattaagag taaatggtga gttttttggg atagagcggg ataatgtggt
      361 ggtagaaatg aatattcgaa ccattgtgag aaatacagaa cgccaaatta aatgtattgt
      421 gattaaagag gtttaagtgt cgcaactatt gaatgcctta gggcagatga ttaccgaaca
      481 acgtaatccg aattcgatga atattgaccg cctttcagcg ttagatatag tccaagtcat
      541 caaccaagaa gacaaacaag tagcgattgc ggtggagcag tgcctgcctc aaattgcaca
      601 agcggtggaa aaaattgtgc aagcctttga gaaaggtgga cgattggttt atgtcggtgc
      661 cggcacgagc ggaagattag gggtgcttga tgcttcggaa tgtccgccca cttatggcgt
      721 aaaacctgaa atggtggttg gattaattgc cggtggtgag cgggcattac gtttcccgat
      781 tgaaggggcg gaagataatc gtgagcaagg caaagtagat ttacaagcgg tcaattttag
      841 cgaaaaagat gtattggtcg ggattgcagc cagtgggcga acgccttatg tgttaggggc
      901 gatggaatat gctaagcaac ttggtgcgac cacggtgtcg attgccagta acccaaattc
      961 ggcaatggca caaattgcgg atattgcgat tgaaaccgtt gtcgggccgg aagtgctaac
     1021 cggttccagc cgtatgaaat ccggcacagc tcaaaaattg gtattgaata tgctcactac
     1081 tgcgtcgatg attttaatcg gtaaatgcta ccaaaattta atggtagatg tgcaagcaac
     1141 taatgaaaaa ctcaaagcta gagcaattcg gattgtgatg caagcgacag aatgtgaacg
     1201 agaagtggct gaagatacac taaaattagc cgaaaataac gctaaattgg caattatgat
     1261 gattttaggt aacttagata agcagaaagc cgaagattta ttaagccaaa atcaagggcg
     1321 attacaaaaa gcgttaaaat agaagtatgt ctgctctccc cttgtgggag agagacagat
     1381 caatcattca ttcagaatga ttgatcagag agaggggagg cagatttaag caaataaatg
     1441 gcgatgtttc actagttctt ctttggttaa actgaacacc cctaagccac cgtgttcaaa
     1501 ttccagccag ttaaacggca cactggggaa ttgttcgatt aaatgcacca tactgttgcc
     1561 gacttcgcag actagcacgc catcatcatt taagtaatca gcggcttgag caagaatccg
     1621 cttggttaaa tctaacccat ctttgcccga gccaagagct aatgccggct cgtgatggaa
     1681 ctcttcgggc atatcgccta agtcttcttc atcaacataa ggcggattag tcacaattaa
     1741 gtcgtattta tcttgcggta aattgttaaa cagatcggaa cagatcggga aaactcggtg
     1801 agacacctga tgacgctcaa tattaatttg agcaacgtct aaggcatcaa gggaaagatc
     1861 aaccgcatcg acttctgctt ccggaaaacg ctcggcacag gcaatcgcaa tacaaccgct
     1921 gccggtacac atatctaaaa ttcgatgtgg ctcgtttttg ataatgcctt taaacccttt
     1981 tttgatcagc tcaccaatcg gtgaacgtgg cacgatcaca cgctcatcga cataatattc
     2041 accgccacaa aaccaagccg agttggtaag gtatgctaca ggtttgcgag agcctaaacg
     2101 ctcacagatt aaattgatga tacgttcttt ctcaactcga gttaagcgag aggaataaag
     2161 tgtttccggt acatcaaacg gcaaataaag ccctgccaac actaattgtt gtgcctcgtc
     2221 ccacgcatta tcgtagccgt gcccgtaata aagatcagag gcattaaaat agctataccc
     2281 ccaacgcatc atatcttgaa tagtgactaa atcattcaca atgggcaggg cggaaatttc
     2341 atcaagaagt tcggtattat atttaaacat tggcgtgcct tttttcgtat tgttaaaatg
     2401 gctgtgttat accacatttt gctttgtgtt agaatgtaaa aatgaataag aaggaaaaga
     2461 taatgaacga tacgttatta gacgatgaat ttgcattatt cagagaggca gcaaaaggca
     2521 cgaaaaagct gacacaaaat acctttgtgc cgaaagcgga acctcgcaag aaattgcaag
     2581 aattgcgaga attaaaagaa aaagctgata cagaatttta tttctcggat gaatatgagc
     2641 ctttgctgaa agaagaaaat gaaaaagtga aatatctgcg agaagatgtt gatccttata
     2701 ttctcaaaca gttacggcga ggcgatttcc aacccgagct gtttttagat ctgcatggtt
     2761 taactcgaga aaaagcgaag aaagagttgg cagcgttgat tttagcctgt gagcgggaaa
     2821 aggtatattg tgccagtgtg atgaccggct ttggcactcg cacgctcaaa gatcaaattc
     2881 cacgctggtt ggttcagcac ccaaaagtaa tggcgttgca ccaggccccg aaagagtggg
     2941 gcggagatgc ctctattcta attttggttg agcagcctga aaatcctgaa aaaatgtttg
     3001 ggcgttaaaa ttcggctgaa ttgccaattt tttattaaaa acgaccgctt gtgtatcatt
     3061 aaggagaaat gatgtcagaa caaactttcc accaacttac agcattatta gattcgcatc
     3121 gagctcgcta tcgagtggta ggacatcctt ctgccgggaa atcggaagaa gtggcaaaaa
     3181 ttcgaggaac agaaatcggg caaggggcga aagccttagt ttgcaaggta aaaggcaatg
     3241 gggtaaagca agctgtgctt gctatattac ctgctgatta ccaagcggat ttaacaaaaa
     3301 ttgcagagca tcttggtggg ttaagagcct cacttgccag cccggctgaa gtggcagaat
     3361 tgaccgattg tgtatttggg gcaattccgc cgtttagctt tcaccccgat ttattattgg
     3421 tggctgagcc aagtctgttt gagcgttatg ctgaattagc ctttaatgcc ggtacgttgg
     3481 aacgttcgat tattctgaat accgaggatt accaaaagat agttaatcct gtgttggttc
     3541 aattcgccaa aagctaggtt atggggcgaa aaactccacg attttgccaa tagcgatatc
     3601 cattaattta gggttagaaa aagcgtgatc tgccccttca atcgggagca gttcaatcac
     3661 gttattatcg gcaaactgct gtgaagtgct taacgccacc atttcatctt ccgtgccgtg
     3721 cagaattaaa atttgctcgg cataatccaa ataatcgttt tgggtaatat cggttagctc
     3781 atcaaaaaag gcttggctga ttttcatctg gcgatcaaac ccccacaaaa tttctcgccc
     3841 tttggcaagt ttttgccgtt cctcttctga caagcggttc attaacgaat ggtagatttg
     3901 tactgccggt gcccgcaatg caattttccg aaacggattg cctttttccg ccagatattt
     3961 caaggttaaa tagccgccaa aactagtgcc gtaggcatac agatttttag cattcaggct
     4021 ggttttggca taatcaatca ccagttgcag ataagtaatg gattcctcaa ccgagagttt
     4081 tttacgggca tcatcaccgt ggcaagggaa atcaaaggca agggcagcgt agcctttata
     4141 ttttgagcta aggcgttccc caaatttggt attcgatttc agatctttag acgaaccaaa
     4201 gccgtgcaac acaatcacta cattctcgat ctgctgcaat tctttttcat aaaacagttt
     4261 acagcgaatg ctgagaccct gttcattaat ctcaaagcgt ttttccattt tatgttaagt
     4321 attgaaattg aagatgacaa aattttagca ctatttgagt gcaagcggtc ggatctctcg
     4381 caaaatttgc aaattttccg gtaaatttaa ccgcttgtac tagccaaaat ttaagcatat
     4441 ttatagaata cagccttcgt ttttaaaagg agaaatgaaa tgttacaact tattttagcg
     4501 attttatgta gcgtgactgt aggcgtgttg attaaattcg cccgccaaaa agggattcgt
     4561 atcgaccaaa gtattgcggt gaactatatc gtgactacca cgatgacgtt tttattacta
     4621 aaaccggatt accaagggca gtcgattacc gatattattg ctaataaccc gacttcctat
     4681 atttttgtga ttttaagtat cacattgcct actattttct tggtgcaagc aaaagcccta
     4741 gagtttgccg gtattatccg aaccgatgcg gcacaacgtt tatcgctgtt cctgccgatt
     4801 ttggcggcat tcaccatttt tggtgagcag gttacgcaaa ataaattaat tgcacttctg
     4861 ttagctttcg tggcactcgg ttgcttatta tggaaaggca atcagggaat ggaaaaaggc
     4921 ggaaaaattg cgattatcag ccttgctctg gtttgggtag gctatggcgt gaacgatatt
     4981 ttatttaaac agattgccaa atcaggctct gctttccctg tcaccctttc gattgccttt
     5041 atcggtgcag gctgttttat gtttatctat ttgctactta aacgcactca atggcacgtt
     5101 ccaagtgtct taaccggctt attgctaggc gtgttgaact tcggcaatat tctgttctat
     5161 attcaagctc accaagccat gaaagatgac ccaactttag tcttcactgg aatgaactta
     5221 ggggtaattt gcttaggcac tttcgttgga gcattcttct ttaaagagaa aatccacaaa
     5281 gtgaactact taggcgtggc gattgcgatt gtggcgatta tttgcttgtt ttattggcgg
     5341 taaatatact ttccaaaatt aagggcgaac ataatgttcg cccttaattt ttgagtaata
     5401 tagtgtaaaa tattcaataa attcgaccgc ttgttgtacc gattcatatt tcataaagga
     5461 caaaaaatga agctaaaagc cttatctaca ctcattgcct cttcaatgct atatagtcag
     5521 agttttgctg taccgccgga aaaaacagct gaagagccac agcccttttt caataaaacc
     5581 gaatctgggt atgatttagt ctttaatgat caaaactatc gtttaattga aacggaatta
     5641 aatggcgaga aaatccaatt ccgtgccttt gagcggattg tgtatgtgaa caatccgatt
     5701 gagccagatt accaaacaat taatctgtat gtgccggaag cttactacaa taatggcgaa
     5761 atcaatggct accaagcgga taccgccccg atcttcttgc caaattcagt ggggggctat
     5821 atgccggcaa aagcggcaag ttatgataaa aaaagacgtg acggttcacc aggtacgatt
     5881 ttggtggcgt tatctaaagg ctatgtggtg gcaagtgtgg gagcaagagg acgcacgcta
     5941 caaaaagagg gaaaatacac cggcaaagca ccttctgcca ttattgattc aaaatccgcc
     6001 gcccataaag cgtgtcggtt cgagtccgac cactggcacc actcactatg taaaatttag
     6061 ttttacatag tttgctgtaa gcatttgaat tttgaatcgt ttgtgtagga ttgttcaaat
     6121 catattc
//
LOCUS       DANLXD010000125         5956 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.126, whole genome shotgun sequence.
ACCESSION   DANLXD010000125 DANLXD010000000
VERSION     DANLXD010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5956)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5956)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5956
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.126"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            82..1899
                     /locus_tag="PXD18_002266"
     CDS             82..1899
                     /locus_tag="PXD18_002266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme anaerobic degradation radical SAM
                     methyltransferase ChuW/HutW"
                     /protein_id="HDL6302649.1"
                     /translation="MIIKDTHWTSQQASPNAFPERQALMPIWGGKNIERNQWQSLWLE
                     QAPNALLQDGLAYFHIPFCASHCIFCGFYRNAWKENYSQIYTDRVISELRYESSLWRG
                     QGKIHAVYFGGGTPTALHTEDLVRLIRACYRYLPLAEDCEFTIEGRISHFDIDKAKAC
                     IEAGVNRISIGIQTFNSEIRKRLGRKHSGEEAQTYLKALSELNAVIVADLIFGLPNQT
                     DDIWQNDIEIATSLPISGLDIYAFNNYPFLPINRLIEHGKLPAPAGFDTQSLHYAYAV
                     EKLKAQGWQQVSNNHFAFPNRGERNRYNTLVKSNMPCLAFGSGAGGNFGGLSYQVQSD
                     LKTYLDSPLDQKSLSFLSKHGEHKALLGVIQHSMELGYLDTTPFEQNAKAEKLLQQWE
                     ALDLLKREKNQVYLNTSGRYWSPTLIRKLMLTLPQSSKDNNMITPLTKELENKLRTNL
                     KENPGQILEMLAGMNQCSLESVINCLPKEMVMQTGGERFVEIMQAIAGWNEAVTFIIH
                     TPDAIAEVTAKLPQGKIGRGFYNFEHGVDGGIHGHLRYENCAAIYLLDRPFMGKRTVA
                     LTFINQSGEAMFKIFVGRDEQGQLRENQIQAMRKLIGGC"
     gene            1902..2519
                     /locus_tag="PXD18_002267"
     CDS             1902..2519
                     /locus_tag="PXD18_002267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL6302650.1"
                     /translation="MILVCGANGLLGRAICDKLPREKTIAVLRKDAMDTFFSERNIAV
                     EIADLLDLESCNALLQKTQPEILITVVGGKNEQGIRSDKTANINLIKAVEKYSPTTKV
                     VLVTSVGCAEQWDLISPLAQQALGEALKAKTEAEAYLQQTALNWLIIRPGGLNNDEVN
                     DEYQIVRDLPNERKMYVSRKSVATGIVRLLDSTENHQIFSIINRG"
     gene            complement(2603..3214)
                     /locus_tag="PXD18_002268"
     CDS             complement(2603..3214)
                     /locus_tag="PXD18_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentahemic C cytochrome"
                     /protein_id="HDL6302651.1"
                     /translation="MKSLSKIAFCFLAFIMPTFCFAGSNSYTTETIPLFADENLTQKI
                     GQLEAGAEIKLVQTTAKAAEIELNLWRKSKGFGRIWYHSFSKNITDAVFEKSFISNNP
                     LLEIVESKEDPNTGLVWQKVKMNVWVENAEFTQDLTNFWANTKNTYKTECSVCHKQRD
                     PKMHDANEWIAVFNGMVGFTDMDEATQKKVLRYLQMNAASSSQ"
     gene            3409..4317
                     /gene="glyQ"
                     /locus_tag="PXD18_002269"
     CDS             3409..4317
                     /gene="glyQ"
                     /locus_tag="PXD18_002269"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017806840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HDL6302652.1"
                     /translation="MSTKFNVKTFQGMILALQDYWASKGCTIVQPFDLEVGAGTSHPM
                     TCLRALGPEPMAFAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLDS
                     LKMLGFDPTQNDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPV
                     TGEITYGLERLAMYIQGVDSVYDLVWSDGELGKTTYGDVFHQNEVEQSTYNFEYADVD
                     FLFQCFEQYEKEAQYLLGLEKPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILR
                     IRALTKGVAEAYYASREALGFPGCKK"
     gene            4397..4657
                     /locus_tag="PXD18_002270"
     CDS             4397..4657
                     /locus_tag="PXD18_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302653.1"
                     /translation="MKPILYFADWCPDTAPFVAELDRLGIEYEPCDITKGGSTLKPFL
                     KLRDTHSAFDHAKANGYIGIPALLIEGEKVVLDLAELEGIFG"
     gene            4700..5734
                     /locus_tag="PXD18_002271"
     CDS             4700..5734
                     /locus_tag="PXD18_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HDL6302654.1"
                     /translation="MKTVIADNSAEFVNEISQLIQSSKQRMTVAVNAELTLLYWHIGK
                     RINDYILQGERAEYGQEVVKNLAQSLTEQFGKGWSKRHLNYTMQFATTFPNLEIVHAL
                     RAQLSWTHFKQIIHIDDPTKRGFYATMAAQERWSTRTLEDRIGSLLFERTAISKKPDE
                     TIIAELSLLREKGEYNQSMVLKDPYILDFLDLNDRYMERDLEDAILREIEQFLLELGA
                     GFTFVARQKRIQIDNDDFYIDLLFYNRKLKRLIAIELKTESFKHSHKSQMELYLAWLA
                     KYEQEADENPPLGMILCTGKKQEQVELLDLKNSDIHIAEYMTVLPSKAVLEQRLHLAV
                     ERAKERFLLK"
BASE COUNT         1831 a         1122 c         1309 g         1694 t
ORIGIN      
        1 ttatttgatt ttaatcaagt cattcataac ttaattttgt tataaatatg accttgttta
       61 tagcactatt ttgtttcgat aatgattata aaagatacac actggacatc tcaacaagcc
      121 tctccaaatg ctttcccaga acgacaggca cttatgccta tttggggtgg gaaaaatatt
      181 gaacgcaatc aatggcaatc tttatggctg gaacaagcac caaatgcgtt attacaggat
      241 ggtttagctt atttccatat tccgttttgc gctagtcatt gtattttttg tggtttttat
      301 cgcaatgctt ggaaggaaaa ttatagccag atttatactg atcgtgtgat tagtgaactt
      361 cgatatgaat cttcactatg gcgaggacaa ggtaagattc atgccgttta ttttggtgga
      421 ggaacgccaa cagcgttaca tacagaagat ttagtacgat tgattcgagc ttgttatcgt
      481 tatttgccac tcgctgaaga ctgtgaattt actattgagg gtagaattag ccattttgat
      541 atagataagg ctaaggcttg tattgaagca ggcgtgaacc gtatttctat tggtattcag
      601 acttttaact ccgaaattcg caaacgttta gggcgcaaac atagtggcga agaggctcaa
      661 acttatttaa aagccttatc ggaattaaat gctgtgattg ttgctgattt aatttttggc
      721 ttgccaaacc aaacagatga tatctggcaa aacgatattg aaattgcgac tagtttaccg
      781 atctcaggct tagatattta cgcctttaat aattatcctt tcctgcctat taatcgctta
      841 attgaacatg gaaaattacc tgcgcccgca gggtttgaca cccaaagctt acactatgct
      901 tatgcagtag agaagttaaa agcacaaggt tggcagcaag tgagcaataa ccactttgct
      961 tttccaaatc gaggtgaacg caatcgctat aatactttgg ttaaatcgaa tatgccttgt
     1021 ttggcatttg gctccggtgc ggggggaaat tttggtgggc tgagttacca agtacaatct
     1081 gatttaaaga cctacttaga ttcgcctctt gatcagaaaa gcctttcttt tttgagtaaa
     1141 catggtgaac ataaagcact gcttggtgtg atacaacata gcatggaatt gggttactta
     1201 gatacaacgc cttttgaaca aaatgcgaaa gctgaaaaat tattgcaaca atgggaagcg
     1261 cttgatttac tgaagcgtga aaaaaatcaa gtatatctca ataccagtgg tcgttactgg
     1321 tcaccaacat taattcgtaa actaatgtta acacttcctc aatcaagtaa ggataacaac
     1381 atgataacgc cattaactaa agaattagaa aataaattgc ggacaaattt aaaagaaaac
     1441 ccagggcaaa ttttagaaat gctggcagga atgaatcaat gtagcttgga atcggtaatt
     1501 aactgtctgc ccaaagaaat ggtaatgcaa acaggtggtg agcgttttgt ggaaattatg
     1561 caggcaattg ctggttggaa tgaagctgtg acttttatta ttcatacgcc tgatgcgatt
     1621 gcagaggtaa ctgctaaatt gccacaaggt aaaattgggc gaggttttta taattttgaa
     1681 catggtgtag atggaggaat tcacggtcat ttacgctatg aaaattgtgc tgctatttac
     1741 ttacttgatc gcccatttat gggaaaaaga acggtggcgt taacttttat caatcaaagc
     1801 ggtgaggcga tgtttaagat ttttgttggg cgtgatgaac aaggtcaatt acgagaaaat
     1861 cagattcaag ccatgcggaa attaattgga ggatgctagt catgattttg gtttgtgggg
     1921 caaatgggtt gttaggacga gcaatctgtg acaaattacc tagagagaaa acgatagccg
     1981 tcttacgaaa agatgctatg gatacgtttt tcagcgaacg aaatatagca gtagaaatag
     2041 cagatttatt agatttggaa tcctgcaacg ccttgttaca aaaaacacaa ccggaaatct
     2101 tgattacggt agtaggagga aaaaatgaac aaggtattcg tagcgacaaa acagcaaata
     2161 ttaatttgat aaaagcagtt gaaaaatatt caccaactac gaaagtagtt ttagttacta
     2221 gtgttgggtg tgcagaacaa tgggatttaa ttagcccatt agcacagcaa gctttaggtg
     2281 aagcactaaa agccaagacg gaagctgaag cttatttaca gcaaacagca ttaaattggc
     2341 tgattattcg acccggtggg ttaaataatg atgaagtaaa tgatgagtat cagattgtgc
     2401 gtgatttacc taatgaacgg aaaatgtatg taagccgtaa atctgtcgca acaggcatag
     2461 tgcgtttact ggatagtacg gaaaatcatc aaatcttctc tattattaat aggggatagt
     2521 atatttcaac gaaggcaagc gggcatattt tatggttatt ttgcaactat aaaacagacc
     2581 gcttgtgaga tctttttcta ttttattgag aactggatgc cgcattcatc tgcaagtagc
     2641 gaagcacctt tttctgggta gcttcgtcca tatcggtaaa accgaccatt ccgttaaata
     2701 ctgcaatcca ttcgtttgca tcatgcattt taggatcacg ttgtttatgg cacacgctgc
     2761 attctgtttt ataggtattt ttggtgttcg cccaaaagtt agtgagatct tgggtaaatt
     2821 cggcattttc cacccacacg ttcattttca ctttttgcca taccaagccg gtgttcggat
     2881 cttccttgct ctctacaatc tctaacagtg ggttgttgct gataaaagat ttctcaaata
     2941 ccgcatcggt aatattttta ctgaaagaat gataccaaat ccgcccgaaa cctttgcttt
     3001 ttcgccataa attcagctca atttcagcgg cttttgcggt tgtttgcacc aatttaattt
     3061 ctgctccggc ttctagctgc ccgattttct gtgtcaaatt ttcatcggca aataaaggga
     3121 ttgtttccgt ggtgtaactg tttgaaccgg caaaacaaaa tgttggcatg atgaatgcca
     3181 agaaacagaa agcgattttc gataatgatt tcatcataaa ccccacaaat tagatgagaa
     3241 attaggttat atgttacaca aattgagcaa aaaagcgttg atttacatca taaaactgat
     3301 tttatgtcga tttcttaatt ttttgcaaaa aaatcccaaa aaatgactgc ttacaagcta
     3361 taataaccag tatttttcga ccatttttca aattcaagag aaaataaaat gagtacaaaa
     3421 ttcaacgtaa aaacctttca aggaatgatt ttagccctgc aagactactg ggcaagcaaa
     3481 ggttgcacca ttgtgcagcc gttcgattta gaagtggggg caggcacctc gcacccaatg
     3541 acctgcctgc gtgcgcttgg ccctgagcca atggcgtttg cctatgtgca accatctcgc
     3601 cgcccgacag acggtcgcta cggcgaaaat ccgaaccgtt tacagcacta ctaccagttc
     3661 caagtggtga ttaaaccttc gccggataac attcaagaac tttacctcga cagcctgaaa
     3721 atgctcggtt tcgacccaac ccaaaacgac attcgttttg tggaagacaa ctgggaaaac
     3781 ccaacgcttg gggcgtgggg cttaggttgg gaagtgtggc tgaacggaat ggaagtgacc
     3841 caattcacct acttccagca agtcggcggc ttggaatgta aaccggtgac aggcgaaatc
     3901 acctacggct tagagcgttt ggcgatgtac attcaaggcg tggacagcgt gtacgacctc
     3961 gtgtggtctg acggcgaact cggtaaaacc acctacggcg acgtattcca ccaaaacgaa
     4021 gtggagcaat ccacctacaa ctttgaatac gctgatgtgg acttcctgtt ccaatgcttc
     4081 gagcagtacg aaaaagaagc ccaatacctg ttaggcctag aaaaaccatt gccattgccg
     4141 gcatacgaac gcattttaaa agccgctcac agctttaact tattagatgc tcgtaaagcg
     4201 atctcggtaa ctgaacgcca acgctacatt ctacgcattc gtgccttaac caaaggcgtt
     4261 gctgaagcgt actatgccag ccgtgaagcg ttggggttcc cggggtgtaa aaaataatcg
     4321 tagggacgcc acgcttggcg tccgtcaata aattacaaaa cggacacgaa gcatcgtgtc
     4381 cctacaagga tttacgatga aaccgatttt atacttcgcc gattggtgtc cggataccgc
     4441 cccatttgtg gcagaactag accgcttggg cattgaatat gagccgtgcg acatcaccaa
     4501 aggaggctca acacttaaac catttttgaa actgcgagac acgcattctg cctttgacca
     4561 cgccaaagcc aacggctata ttggcattcc ggcattgctg atcgaaggcg aaaaagtcgt
     4621 gctggatttg gctgaattag agggtatttt cggctaacaa gcggttgaat ttggcggaaa
     4681 tgttgcaaag gagccaataa tgaagacagt aatagcagat aattcggctg aatttgtgaa
     4741 tgaaatttca caacttattc aatcgagtaa gcaacgaatg accgttgcgg ttaatgcaga
     4801 attaaccttg ctttattggc atatcggaaa acggatcaat gactatattt tgcagggtga
     4861 acgtgcggaa tatgggcaag aagtggtgaa aaatcttgct caaagtctga cggagcaatt
     4921 tggtaaaggt tggagtaaac gccatttaaa ttatacaatg caatttgcta caactttccc
     4981 taatttggaa attgtgcacg cactgcgtgc acaattaagc tggacacatt ttaagcagat
     5041 tattcatatt gatgatccaa caaagcgagg gttctatgca acaatggctg cacaggagcg
     5101 ttggagtaca aggacattag aagatcgcat tggctcatta ttgtttgaac gcacggcaat
     5161 ttccaaaaag cccgatgaaa ccattattgc tgaattgagt ttgctacgtg aaaaaggcga
     5221 atataatcag tcaatggtgt tgaaagatcc ctatattttg gattttctcg accttaacga
     5281 ccgttatatg gaacgtgatc tcgaagatgc gattctacga gagatcgaac agtttttact
     5341 ggaacttggg gcgggtttta cctttgtcgc ccgccaaaaa aggattcaga ttgataatga
     5401 tgatttctat atcgatctgc tgttttataa ccgtaaactc aaacgcctga ttgcgattga
     5461 actaaaaacc gaaagcttca aacattccca caaaagtcaa atggaactct atttggcgtg
     5521 gctggcgaaa tacgagcaag aagcagacga aaacccaccg cttggaatga ttctctgcac
     5581 cggtaaaaag caggagcaag tggaattgtt ggatttgaaa aattccgata ttcatattgc
     5641 ggaatatatg accgtgttgc cgagtaaagc ggtattggaa caacggttgc atttggcggt
     5701 ggaaagggcg aaagagcggt ttttactaaa atagcaagcg gttaaaatca gcggaaatgt
     5761 tgcaaaatga aagtatgatg gaaacgattt ggttgcatat tccgttggtg ggtggttaga
     5821 gattttcaaa tctcccccct ccccctcttt ggctaaagag ggggcgatca tttagtgagt
     5881 aattttaatt catctgacta tttacaatct taatgaagaa agatgaatta taaatttacg
     5941 aagatcaaat tcccct
//
LOCUS       DANLXD010000126         5739 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.127, whole genome shotgun sequence.
ACCESSION   DANLXD010000126 DANLXD010000000
VERSION     DANLXD010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5739)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5739)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5739
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.127"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            573..842
                     /locus_tag="PXD18_002272"
     CDS             573..842
                     /locus_tag="PXD18_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302655.1"
                     /translation="MKNKNFEIAKVVILNEQLGSPKDLELKVVENSLSDEDRYDIKQA
                     VLKAVGNGCSDPEMLASRCCSAIEIINRNGLNTGNGSISTSSNSV"
     gene            complement(820..1092)
                     /locus_tag="PXD18_002273"
     CDS             complement(820..1092)
                     /locus_tag="PXD18_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014391457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein Cas2"
                     /protein_id="HDL6302656.1"
                     /translation="MRNYLISYDLYKAGQNYDGLISYIKSHQVWAAIHKSVWYIKSNK
                     SAEQIRNELLIYLDKNDSVFVTDMNSAAWNNLTEGNGEYIRQNWMR"
     gene            1373..1448
                     /locus_tag="PXD18_002274"
     tRNA            1373..1448
                     /locus_tag="PXD18_002274"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1406..1408,aa:Arg,seq:tct)
     gene            1760..2272
                     /locus_tag="PXD18_002275"
     CDS             1760..2272
                     /locus_tag="PXD18_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302657.1"
                     /translation="MEAKYNMIIELAQQQGLTHIQLTQKHCLHLAASVGKLCSGVVNN
                     AKQKIKTATGEIFTLLTIINHQIQFDEDLELHTWKASGTTPPEQRAIRMLHHTSQFAW
                     FAPWLVNNNEKECNQNKIRIDVYNKCSGMMIELEGILTEYKLTLDECVDEFLGNDHCL
                     SEFITKGTKK"
     gene            2269..2628
                     /locus_tag="PXD18_002276"
     CDS             2269..2628
                     /locus_tag="PXD18_002276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302658.1"
                     /translation="MKTFSIHTSVWHDSSTKGFRHNIKHKRHDCWRADIRIKQKINNV
                     WVQISRIRKRFKCPEQAKSFAEQWKQTETPAFLQHQINRQALREELSNLEQRKIQKNG
                     MLEVIEYRISQIKELLK"
     gene            2625..3104
                     /locus_tag="PXD18_002277"
     CDS             2625..3104
                     /locus_tag="PXD18_002277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302659.1"
                     /translation="MKRNKVESYTIRLLKNNHTKRYFGEVILNGIKEISTAEMMSEIN
                     AIKALNKRIEALNKTKAVNLPNYPEIRGHQPIMYNYTFEQIEEDPEQVKPKPSKPKRK
                     PFTPYGLNGYFVDSNGNIRLHLDRRASAETITLETDFFNALAEMVKRTQEANNAKHA"
     gene            3238..3450
                     /locus_tag="PXD18_002278"
     CDS             3238..3450
                     /locus_tag="PXD18_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302660.1"
                     /translation="MIGYEDYTDASLQPEEDPSEEAFLLVEEKIIDVLENNGFETVAT
                     ILAGSDGWCNAINAYLAEQNKHRNEF"
     gene            3463..4386
                     /locus_tag="PXD18_002279"
     CDS             3463..4386
                     /locus_tag="PXD18_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecT"
                     /protein_id="HDL6302661.1"
                     /translation="MTNQNQQVAQKQDKFPIKTLFESPNVKQKLQELLNKNAATFTTS
                     VLQIVNSNSMLRNAEPMSVFNAACMAATLNLALQNGLGFAYIVPYQNRKEKKTEAQFQ
                     LGYKGLIQLAQRSGQFKRLVAVPVYEKQLLAEDPINGYEFDWKQKPAKDEKPIGYYAY
                     FKLINEFTAEIYMTTQEVHDHANRYSQTYRKGYGVWHDNFEAMALKTVMKLLLSKQAP
                     LSVEMQQAVLADQAVVKDVENAEFAYPDNEIQEAEFTELKVSDEVFEKCKQTIINKES
                     TLQDMCDNGYEFNKEQYAELEKLENEQQSNV"
     gene            4379..5041
                     /locus_tag="PXD18_002280"
     CDS             4379..5041
                     /locus_tag="PXD18_002280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017806850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation protein TolB precursor"
                     /protein_id="HDL6302662.1"
                     /translation="MYKFKPRCSMLHQLMSEPRTKADREAGLISDTAKAAVREVAKFD
                     LFGYQSFDGNKYTEKGNQLEEQAIKLSGFTRGLVLKKNTERRENDWISGECDIYVPSR
                     KLIIDTKCSWDIGTHPFFADEAIAKAEKAGYDIQMQGYMWLWDCEEAQIDFVLFPTPI
                     DLIGTYESTEKLIDLVEQIPQQKRITTVTVKRDEAIIAKIKDRVKAASKYYDKLIQEA
                     MN"
     gene            5082..5729
                     /locus_tag="PXD18_002281"
     CDS             5082..5729
                     /locus_tag="PXD18_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HDL6302663.1"
                     /translation="MTTQKKYELLQNDTINHNGRTLYRIKAITTFGTVFAGTLGGYIE
                     KESNLKHLGNAWVYDNAKVYDSAEVYGNAKVYDSAEVYDNAKVYDSAEVYGNAKVYDS
                     AEVYGNAKVYDSAEVYGNAEVYGNAEVWGSAKVRSFAVLSERKMIFWASNVGTENGTL
                     TVYNGKDGLLVTRGCFTGTVEEFLAKSDEVHDEKTKREYQLLIEVAKSRILGEAT"
BASE COUNT         2004 a         1184 c         1170 g         1381 t
ORIGIN      
        1 ccttgaataa accgccagga gggcggtttt ctcttgccta aaatctgcaa aattctcttc
       61 aaaaacgacc gcttgcaact caatctgttt atttattaag caatcaaaca acctttctaa
      121 aaataaattc cttttaaaat caacaaatta cctttttgtt atttattttt accttattta
      181 acataccttt tggtatttac aacaatattt accataaggt ataatgcacc catcaaaacg
      241 agctacggct caatgctctt taaaaatcaa attcaaaacc gctttaagcc taatggtgaa
      301 aagtaggaag acgaaagtcg gaggcagccc ttaaaacgcc cactacttca aagcgttatg
      361 ccctttggtg caagcaaagg aatacaagca tataccctta tagcggttta ggtgaaagtc
      421 tgggcgtgta cattgagaca caagggagta accgaaattc aaattgtgca aacgcagctc
      481 taaaattgcg tgacagctcg gagagacggc atttcaaatt ccaaagcata tttgagaaag
      541 tgtgttttgg aatatttaac tagaggtaaa ttatgaaaaa caaaaatttt gaaattgcga
      601 aagttgttat tttaaatgaa caactaggaa gccctaaaga tttggaatta aaagtagtag
      661 agaatagcct atctgatgaa gatagatacg acatcaaaca ggcggtactt aaggctgtag
      721 ggaatggttg ttcagatcca gaaatgcttg catcacgatg ttgttccgca atcgaaataa
      781 ttaatagaaa tgggctaaac actggtaatg ggagtatatc tacctcatcc aattctgtct
      841 aatgtattca ccatttcctt cagtcagatt attccaagca gcactattca tatccgtaac
      901 aaagacacta tcgttcttat ctaaataaat gagcagttca ttacgaattt gttctgcaga
      961 tttattagat ttgatatacc aaactgattt atgaatagca gcccaaactt gatggctttt
     1021 aatataacta atcaatccat cgtaattttg cccagctttg tataaatcgt aagaaattaa
     1081 atagtttctc atagaagaat ccttatttgt gctgtgagag atttaattat attccttagt
     1141 gttgtgagag acaataagga aacttgacgg ctcacaagta taaaagagcc accatctcaa
     1201 accgctctca acaaagagtt agcccgataa cctcacttgg ttttttgcgt atgttttccc
     1261 aaagtgccgt tatccagcga aacgaatgga ctagagagcg gtttgagatg gtgaaagcca
     1321 tcctccttag attgaagtaa accctgccgt tggggttaag caacggtact ttgaccgcat
     1381 agttcagtgg atagagcagc tgccttctaa gcagtgggtc gagagttcga atctctctgc
     1441 ggtcgccatc caaaaccgct ttgcgcacat catcgatgac gagcctacga agtggaaacc
     1501 taccgtgtag agcggttttg aatggctaat aaaacaatgt gaggtatcaa atgcttatta
     1561 agttaaaaag ccctgaacaa gcagggcaag aagaaatctg ggaagttagc gatgattgga
     1621 ttgctcctca agaattaaat ccgccatcag aaacatctcc ttaatataac gcctgtagag
     1681 ttgctcaagg ttaagtaatt actgcggagg ggctttttac acccaaaatt cagatttttg
     1741 actaaaaaag gaacgaaaaa tggaagctaa atacaacatg attattgagc tggcacaaca
     1801 acaaggctta acccatattc aacttactca aaaacactgt cttcatcttg ctgcatcagt
     1861 ggggaaacta tgttctggag tcgttaataa tgcgaaacag aagattaaaa cggctacggg
     1921 agaaattttt acattactca ccatcattaa ccatcaaatc cagttcgatg aagacttaga
     1981 gcttcacacg tggaaagcta gtggaacaac cccacccgag caaagagcga tacgtatgtt
     2041 acatcatacc tcgcaatttg cttggtttgc tccttggtta gtgaataaca atgaaaaaga
     2101 atgtaaccaa aataaaataa gaattgatgt atacaacaaa tgttccggaa tgatgattga
     2161 gctggagggt attcttacag aatacaagct aactcttgat gagtgcgtag acgaattctt
     2221 aggaaatgac cattgtttga gtgaatttat taccaaagga acgaaaaaat gaaaactttt
     2281 agcattcaca ctagtgtatg gcacgacagc tcaactaaag ggtttcgaca caacatcaaa
     2341 cataaacgcc acgactgctg gagagcggat atccgcataa aacaaaaaat caataatgtg
     2401 tgggtgcaaa tctcaagaat acgcaagcgt ttcaaatgcc ctgaacaagc aaaatccttt
     2461 gctgaacaat ggaaacaaac tgaaacacct gcatttttgc aacaccaaat caaccgccaa
     2521 gcattaagag aagaattatc aaaccttgag caacgtaaaa tccaaaaaaa cggaatgctt
     2581 gaggtgattg agtatcgtat tagccaaatc aaggagttac tgaaatgaaa cgcaataaag
     2641 tagaaagcta tactatccgc ttattaaaaa ataatcatac aaaacgctac ttcggagaag
     2701 ttatattaaa cggcataaaa gaaatcagca cggcagagat gatgtctgaa attaacgcta
     2761 ttaaggcatt aaataagcgt attgaagctc tgaataaaac caaagccgtt aatttgccta
     2821 attatcctga aatcaggggt catcagccta ttatgtacaa ttacactttt gaacaaattg
     2881 aggaagatcc tgaacaggtt aagcctaaac catcaaaacc aaaacgcaaa cctttcacac
     2941 cctacgggct aaacggctac tttgtggata gcaacggcaa tattcgcctg cacctagaca
     3001 gacgagcaag tgccgaaaca attacccttg aaactgattt cttcaacgct cttgccgaaa
     3061 tggtaaaacg tacacaagag gcaaacaatg ctaaacatgc ttagacaatg gattacatac
     3121 ggcttatacg ccctgctttt tatggttgcc atcaccctcc taatgcaatg aagagcttat
     3181 ccctgaaagc acctgcaagc ctgaaacttg cgaatttaaa gtaacggaga aagtgtgatg
     3241 ataggatacg aagactacac agatgcttca cttcaaccag aagaagaccc tagcgaagag
     3301 gctttcctct tagtggagga gaaaattata gatgtgctag aaaacaacgg ctttgaaacc
     3361 gttgctacta tcctagccgg ttctgatggc tggtgtaacg caattaatgc ctacctggcc
     3421 gaacagaaca aacacagaaa tgaattttag aggaataaga taatgacaaa ccaaaatcaa
     3481 caagtagcac aaaagcaaga taaattcccg attaaaaccc tatttgaaag cccgaatgta
     3541 aagcaaaaac tacaagagct tttaaacaaa aacgcagcca cgtttacaac aagcgtgttg
     3601 cagattgtga atagtaactc aatgttacgc aatgccgaac cgatgagcgt attcaacgcc
     3661 gcttgtatgg cagcaacgct taatttggca ttacaaaacg gcttaggttt tgcctacatt
     3721 gtgccgtacc aaaaccgcaa agagaaaaaa accgaagctc aattccaact tggctacaaa
     3781 ggtttaattc aactggctca acgtagcggg caatttaaac gccttgttgc cgtgccggtg
     3841 tatgaaaaac aactgcttgc cgaagacccc atcaacggtt acgagttcga ttggaaacaa
     3901 aaaccggcta aagatgaaaa accgattggc tattacgctt atttcaaact gataaatgaa
     3961 tttaccgccg aaatctatat gaccacgcaa gaagtccacg accacgccaa ccgctacagc
     4021 caaacctacc gcaaaggcta cggcgtatgg cacgacaact ttgaggcaat ggctctcaaa
     4081 actgtgatga agctcttgct ttccaaacaa gctccattat cagtggaaat gcaacaagcg
     4141 gtcttggcag atcaagcggt cgtaaaagat gttgaaaatg cagaatttgc ctaccctgac
     4201 aacgaaatcc aagaggcgga atttaccgaa ctcaaggtca gcgatgaggt gtttgagaaa
     4261 tgcaaacaaa ccatcatcaa caaagaaagc accttgcaag atatgtgcga taacggctac
     4321 gagttcaaca aagagcaata tgcggagttg gagaagttag aaaatgaaca gcaatcaaat
     4381 gtataaattc aaaccccgtt gctcaatgct ccaccaacta atgagcgaac ctcgcaccaa
     4441 agccgaccgt gaagccggac tgatttccga caccgcaaaa gcagcggtgc gtgaagtggc
     4501 taaatttgac ctattcggtt atcaatcctt tgacggcaac aaatacactg aaaaaggcaa
     4561 tcagctagaa gaacaagcca ttaagttaag cggttttact cgtggcctgg ttctaaaaaa
     4621 gaacaccgaa cgccgagaaa acgattggat ttcaggcgag tgtgatattt atgtaccaag
     4681 ccgaaagctg attatcgata caaaatgcag ttgggacatc ggcacgcacc cgttttttgc
     4741 agacgaagcc atcgccaaag ccgaaaaagc cggatatgac attcaaatgc aaggctatat
     4801 gtggctgtgg gattgcgaag aggctcaaat cgattttgtg ttattcccta ctccaatcga
     4861 ccttatcggt acttacgaaa gcacagaaaa gctgattgac cttgtggaac aaatccccca
     4921 acaaaaacgc attaccaccg tgacggttaa gcgtgatgaa gccatcattg ccaaaatcaa
     4981 agacagagtg aaagcagcca gtaagtatta cgacaagctt atacaagaag ctatgaatta
     5041 attcaatcgc cccgaaaggg gctttttaat aggtgacaaa tatgacaacc caaaagaaat
     5101 acgaactcct ccaaaacgac acaatcaacc acaacggcag aacactctac cgcatcaaag
     5161 ccataaccac atttggaaca gtctttgcag gtacacttgg cggctatatt gaaaaagaga
     5221 gcaacctaaa acatttagga aatgcttggg tgtatgacaa cgccaaagtg tatgacagcg
     5281 ccgaagtgta tggcaacgcc aaagtgtatg acagcgccga agtgtatgac aacgccaaag
     5341 tgtatgacag cgccgaagtg tatggcaacg ccaaagtgta tgacagcgcc gaagtgtatg
     5401 gcaacgccaa agtgtatgac agcgccgaag tgtatggcaa cgccgaagtg tatggcaacg
     5461 ccgaagtgtg gggcagcgcc aaagtaagat catttgcagt tctttctgaa agaaaaatga
     5521 ttttctgggc gagcaatgtc ggcacagaga acggtacatt aaccgtttac aacggaaaag
     5581 acggactgct tgtaacaaga ggctgtttca ccggcacagt cgaagagttt ttagcaaaat
     5641 ccgacgaagt tcacgatgag aaaacgaagc gggaatatca gctactgatt gaggtagcaa
     5701 aaagcagaat tttaggagaa gcgacttaat cagtcgctt
//
LOCUS       DANLXD010000127         5684 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.128, whole genome shotgun sequence.
ACCESSION   DANLXD010000127 DANLXD010000000
VERSION     DANLXD010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5684)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5684)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5684
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.128"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            573..1577
                     /locus_tag="PXD18_002282"
     CDS             573..1577
                     /locus_tag="PXD18_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDL6302664.1"
                     /translation="MPGDANKIISNGTSAGGALSTLLGASADHYDYEPYLKEAGALNA
                     SDKIFAVSAYCPITNLENADMAYEWQFNGVNEYSRIDMSRLNAAEFNDRSKPKPKPKI
                     EGSLNEAEIKVSNELAERFPTYLNSLHLVDEKGNPLTLDPKGNGSFKDYLSEVVKTAA
                     NKAYRGLVQDSEEQKAFQQISWLSFEKGKVSSVDWFGYVFSDKRMKSPPAFDALNGSS
                     GENNLFGTDTENNRHFTLYSAERSANKDLNLADPQIVKRMNPMHYLDNPNAAEHWRIR
                     VGTADRDTSLAISAILAIKLQMAGKNVNYETPWNVPHSGDYDVNELFLWADELVKGKK
                     "
     gene            1632..3482
                     /locus_tag="PXD18_002283"
     CDS             1632..3482
                     /locus_tag="PXD18_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDL6302665.1"
                     /translation="MQVKKFSQKYINWVLKLGRLKASLLGFFMVALSAILIQSSLTYL
                     FIGRVVVVDILRSIAFGLISAPFVLYFFTLLVEKLEISRLKLEKAVRDLEELREQDAY
                     LNAKLEKNSRDKSILMATISHELRTPLNGIIGLSQILLDDKTTEKQQEYLKTINMSAT
                     ALAHIFGDIIDLEKIDSSRIELVRKEVEFEQLIHDIANFGHFMAGNKQINFEVKYPPD
                     LPKYIYIDHARLSQILWNLISNAVKFTPASGRILLEIYQLDKEQFSFAVTDSGIGIPE
                     KDQRKIFDMFYQAENSKEKKAQGSGIGLSVSKRIAKLMGGDLVVASQENQGSTFTLTV
                     QAESTETKPIFAIQQHSLKVLLVEDIEMNVVVARAMLEKIGCVVDVAMSGEETFQHFA
                     QNSYDLILLDIQLPDTTGFEIAQQLRLQYENEEIDYLPLLVALTANVIQSRQEYQAQG
                     MDDVLHKPLSLDELMRCLNQHFGDDFLQKNEEKQPLVERGSENLPYSITILNELIGVM
                     GKENVLANMDLFADLMPTYLANLQRYLSDWQTTNSVESRKLTADEAHKIKGALASVGL
                     HQLQQTAQLAQSDNGEQWEQNIAHWVEMICSKWQMDLQLAKEYVRSKGDI"
     gene            complement(3578..4132)
                     /locus_tag="PXD18_002284"
     CDS             complement(3578..4132)
                     /locus_tag="PXD18_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDL6302666.1"
                     /translation="MKSQIYYDYYPSPIGQLLLLATEEGLIYIELGQEQQTTSLDNFL
                     SAQAASGQILEIFCKTKEILDRYFAGEPLDFQQLDFLAPQGTPFQQSVWKILREIPYG
                     QTTTYGEIATQLGKPSAMRAVGGAVGRNPISILVPCHRVLGKNQALTGFGGGLPNKRF
                     LLQLEDITYKDKGIEFVKPKTKKW"
     gene            complement(4199..5680)
                     /locus_tag="PXD18_002285"
     CDS             complement(4199..5680)
                     /locus_tag="PXD18_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HDL6302667.1"
                     /translation="MKMKNFSKTLIASLVAFSSAGASAAAFQLAEISTSGLGRAYAGN
                     AAVADNASVVATNPALMTLFKQTEISAGGIFVDADVNIDGKLNATGADASHKNVIPTA
                     IVPNAYIVSPINERLSIGGGVNVNYGLISEFDPNYSAGFLGGRTSLSAVNVNFSAAYD
                     LGYGFVLGAGLNAVHAKAELGRFLGAGAARFAPAKQFLEDKKVQVQSAIQGLKALEAG
                     IAAGNTALEAQKTQVLAQVNGLLKSQNLNQTITNSAQLERLVNGIQNTNASSTIHKLK
                     GDKWALGWNVGLVYNINERNRLGFTYHSEIDLKFKGKYSNTVPVVIPKMVDTITGGAE
                     IDGTLRLRLPAFWEVSGYHKLTDKLAAQYSYKRTDWSKFQSLEAYDMQGNRLLHKTEN
                     FNDSQRIALGLSYDVNEMLTLRTGVAFDESASVTHPSISIPDTDRAWYSVGATVRFTP
                     NLSADVGYSHLRGSNLTFSEDGLATFKSKARANLYGLNVNYKF"
BASE COUNT         1784 a         1016 c         1204 g         1680 t
ORIGIN      
        1 tagattggaa attgtactaa atcctttttg tgatgagtgt tttttagata tctaagtctc
       61 aaaggtattt aagcaggaga attctatttg atattatagc cataatagac gtttttaagt
      121 ttgttatggc tttatttttt taactatatt gacagttata aatatcatct tgtccataaa
      181 tgatcaatga tcatgcaaaa atgaaccagg cagacgcgat gagatgatcg acttcatctt
      241 ttgataaact ctttgcgatt taaacagaaa atatatttag aatgtaaaca aacatgagtc
      301 gattttatgt tcaaagagct gtaataagac ggaataatgt cagaccaaga tagatacttt
      361 caagtaaaat caagcataaa aatgattttc agactttaca aatctgaaag aatgtgtaag
      421 atcaggattg tccgaaattc ggatggaaaa tcccagtgga tgtattggct ggatacatca
      481 taataactat gtatttgtga atgttatttg aatgattcta cgtagttgat tcaaaatcag
      541 cagtgcggta tctgcatgct aatgatgaaa aaatgccggg cgatgcaaat aaaattatct
      601 ctaacggcac cagtgccgga ggagcattat ctactttgtt aggagcttca gctgatcatt
      661 acgactatga gccttatttg aaagaggcgg gggcattgaa tgccagtgac aaaatttttg
      721 cagtttctgc ctattgccca attaccaacc ttgaaaatgc ggatatggcg tatgaatggc
      781 aatttaatgg tgtcaatgaa tatagccgaa tcgatatgag tcgattaaat gcagcagagt
      841 ttaacgaccg ctcaaaacca aaaccaaagc cgaaaattga aggctcgtta aatgaggcgg
      901 aaattaaagt ttctaatgaa ttagcagaac gctttccgac ttatttgaac agtttgcatt
      961 tggttgatga gaaaggcaat cctttaacac ttgatccaaa aggcaacggc tcgtttaaag
     1021 attatttatc tgaagtggta aaaacggctg caaataaagc ctatagaggt ttagttcaag
     1081 atagcgaaga gcaaaaagcc tttcaacaaa ttagttggct ttcatttgag aaaggcaaag
     1141 tcagcagtgt ggactggttt ggttatgtgt tttcagataa acggatgaaa tcaccacctg
     1201 catttgatgc gttaaatgga agttcgggcg agaataattt atttggcaca gacacggaaa
     1261 ataaccgcca ttttacgctt tatagtgcgg aacgttctgc caataaagat ctcaatttag
     1321 ccgatccgca aatcgtgaaa cggatgaacc cgatgcacta tttggataac ccaaatgctg
     1381 cggaacattg gcggattagg gtgggaacgg cagatagaga tacctcgctg gcaatttctg
     1441 caatcttagc aataaaactg caaatggcag gcaaaaatgt taattatgaa accccgtgga
     1501 atgtacccca ttcaggtgat tatgatgtaa atgaattatt cctatgggct gatgagctag
     1561 tcaaaggcaa aaagtaaaaa atagagtaaa ataaagcaga tctgatggtc tgctttttgt
     1621 tttgaggtcg tatgcaagtt aaaaaattta gccaaaaata tattaattgg gtattaaagc
     1681 tagggcggtt aaaagcttct cttttaggct tttttatggt cgctctttcg gcaattttaa
     1741 ttcaaagtag cttaacctat ctttttattg ggcgagtagt cgtggtggat attttacgct
     1801 ccatcgcttt tggtttaatt tctgcgcctt ttgtgcttta tttcttcacg ttattggtgg
     1861 aaaaacttga aatatctcgc ttgaaattag aaaaagcagt aagagatttg gaagaactcc
     1921 gggaacaaga tgcctatctt aacgctaaat tagaaaaaaa cagccgtgat aaaagcattt
     1981 taatggcgac cattagtcac gaacttcgta ctccccttaa tggaattatc ggcttgagcc
     2041 aaattttgtt agatgataaa accaccgaaa aacagcaaga atatctaaaa actatcaata
     2101 tgagtgccac tgcattggct catatttttg gcgatattat tgatttagaa aaaattgata
     2161 gtagccgaat tgaattggta agaaaagagg tggaatttga acaactcatt cacgatattg
     2221 ctaattttgg gcattttatg gcgggcaata agcagattaa ttttgaagtg aagtatccgc
     2281 ctgatttgcc gaagtatatc tatatcgacc acgcacgctt gagccaaatt ttatggaatt
     2341 tgatcagcaa tgcggtgaaa tttacccctg caagcggtcg aattttgctg gaaatttacc
     2401 aattagataa agaacagttt agctttgcgg tgacggattc aggcatcggt attccggaaa
     2461 aagatcaacg caaaattttt gatatgttct accaagcgga aaactctaaa gagaaaaaag
     2521 cgcaaggtag cgggattggc ttatcggtct cgaaacgcat tgcgaagcta atgggcggtg
     2581 atttggtggt ggcaagccaa gaaaatcaag gctcaacttt taccctcact gtgcaggcag
     2641 aaagcacgga aaccaagccg atatttgcta ttcagcaaca ttcccttaag gtgctattgg
     2701 tagaagacat tgaaatgaat gtggtggttg cccgagcaat gttggagaaa atcggttgcg
     2761 tggttgatgt agcaatgagt ggtgaagaaa cgttccaaca ttttgcacag aacagctacg
     2821 atctgatttt acttgatatt caactgccgg ataccaccgg ttttgaaatt gcacagcaat
     2881 taagattgca atatgaaaac gaggaaattg actatttacc gctgttggtt gctttgacgg
     2941 caaatgtgat ccaaagccgg caggagtacc aagcacaagg tatggacgat gtgctacaca
     3001 aaccgctctc tttagatgaa ttaatgcgtt gtctcaacca acattttgga gatgattttt
     3061 tgcaaaaaaa tgaagaaaaa cagccgcttg tagagagagg ttctgagaat ttaccttata
     3121 gcattacaat tcttaatgaa ttgattgggg taatggggaa agagaatgtg cttgccaata
     3181 tggatttatt tgctgattta atgcccactt atttggcaaa tttacagcgt tatttaagtg
     3241 attggcaaac cacaaattct gtggaaagcc gtaaattaac ggcggacgag gctcataaga
     3301 ttaagggagc attagcatca gtcggattac atcagctaca acaaactgct cagcttgctc
     3361 aatccgataa cggcgagcag tgggagcaaa atattgcaca ctgggtggaa atgatttgtt
     3421 ccaaatggca gatggatttg caattagcta aggaatatgt tagaagcaag ggggacattt
     3481 agtaaatttg aaatgttacg atggtgcaag cgtccacgct tgtaccaatt ttaatatctg
     3541 aagcacaagc gtggacgctt gtgctatcaa aacgtattta ccatttcttg gttttcggtt
     3601 ttacaaattc aatgccttta tctttatagg taatatcttc cagctgtaat agaaaacgct
     3661 tattcggcaa gccaccaccg aatccggtta aggcttgatt tttccctaat accctatggc
     3721 aaggcactaa aatcgaaatc gggtttcgcc caactgcacc gccgacggct cgcatcgcac
     3781 ttggcttgcc tagttgggtg gcaatttcgc cataagtagt agtttgcccg taagggattt
     3841 cacgcaaaat tttccaaact gattgctgga atggagtgcc ttgcggggca agaaaatcca
     3901 actgctgaaa atccaatggc tcgccggcaa aatagcggtc taaaatttct ttggttttgc
     3961 aaaaaatttc taaaatctga ccacttgcag cttgagcgga aaggaaatta tcaagcgagg
     4021 tggtttgttg ctcttgccct agctcaatgt aaatcaagcc ttcttctgtg gctaaaagca
     4081 ataattgccc gatagggctt gggtagtaat cgtagtaaat ttgagatttc atgtttttat
     4141 gccaataaaa aaagaggtgt aattgatttt acacctcttt aaaccttaat tcatcaaatt
     4201 agaatttgta gtttacgttt aaaccgtaaa gatttgcacg agctttgctc ttgaatgtgg
     4261 ctaaaccgtc ttcagagaag gtcaggttgc taccacgaag atgtgagtaa cctacatcag
     4321 cagataggtt tggcgtgaaa cgcacggttg cacctacaga ataccaagca cgatcagtgt
     4381 ccggaattga gattgatgga tgagttacac ttgcactttc atcaaatgct acacctgtac
     4441 gcaatgttag catttcattc acatcataag acaagcctaa tgcaatacgt tgagagtcat
     4501 taaagttctc ggttttgtgc aataggcggt taccttgcat atcataagct tctaggcttt
     4561 ggaatttgct ccagtctgtg cgtttatagc tgtattgtgc agcaagttta tcggttagtt
     4621 tgtggtaacc tgacacttcc cagaatgccg gtaggcgtaa tcttagtgta ccatcaatct
     4681 ctgcaccgcc ggtaatggta tctaccatct taggaataac tacaggaacg gtattagaat
     4741 atttgccttt aaatttaaga tcaatttcag agtggtaagt aaaacctaaa cggtttcttt
     4801 cattgatatt ataaaccaag ccaacattcc aacccaatgc ccatttatcg cctttaagtt
     4861 tatgaattgt tgaacttgca ttggtatttt gaatgccatt aaccaaacgt tctaattgag
     4921 cagaattcgt gatggtttgg tttaaatttt gagattttaa taaaccgttt acttgagcta
     4981 atacttgtgt tttttgagct tcaagagcgg tattacctgc tgcgatacct gcctcaagag
     5041 cttttaaacc ttgaattgca ctttgtactt gtactttctt gtcttccaaa aattgtttag
     5101 ctggagcaaa acgtgccgca ccggcaccta agaaacgtcc taattctgct tttgcgtgta
     5161 ctgcattcaa acctgcccct aatacaaaac cataacctaa atcataagcc gcactaaaat
     5221 taacattcac agcacttaat gatgtacgac cacctaagaa accagcagaa tagttagggt
     5281 caaattcaga tatcaaacca taatttacat ttacgccacc accaatagaa aggcgctcat
     5341 tgataggtga aacgatataa gcatttggaa caatagcggt aggaatgaca tttttatgtg
     5401 aggcatctgc acctgtagca ttgagctttc catcaatatt tacatcagca tctacgaaaa
     5461 taccaccggc agaaatttcg gtttgtttaa ataacgtcat taacgcaggg ttggttgcaa
     5521 caacagaagc gttatcggct acagcggcat tacctgcgta agctctacct aaaccggatg
     5581 ttgaaatttc agctaattgg aatgcggcag cagatgcacc ggctgagctg aatgctacta
     5641 atgaagcgat taaagttttg ctaaagtttt tcattttcat agga
//
LOCUS       DANLXD010000128         5677 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.129, whole genome shotgun sequence.
ACCESSION   DANLXD010000128 DANLXD010000000
VERSION     DANLXD010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5677
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.129"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            22..834
                     /locus_tag="PXD18_002286"
     CDS             22..834
                     /locus_tag="PXD18_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL6302668.1"
                     /translation="MGRPELERAVLSVQNQTYPCKHYVFVDGEKYHQQAADILKNFPS
                     VIVTYLPMNTGADGWVNSSINAIAPFLVKEDIICYLDDDNWFEPTHVESGVHALLEMQ
                     SDYAYSLRNFYDLDGEFLCIDTIESLGEYNCVYQEPLECNYQLGGVKGVLSINLNDCQ
                     HIDTNCYFIRSEIARLISTAWYTGIHNDRNVYKKLQELALKGNCTKKVTVNYTLDTRK
                     YYGSVFNELLEEPFLLSEYDAYQFTNEVIKFHSEESLKAWGGCLIWEQNNGS"
     gene            966..1664
                     /gene="aphA"
                     /locus_tag="PXD18_002287"
     CDS             966..1664
                     /gene="aphA"
                     /locus_tag="PXD18_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid phosphatase AphA"
                     /protein_id="HDL6302669.1"
                     /translation="MTAATMFASLIAFSAQAGGPKVAYTQPGIDMRTHEAQQAPIHWV
                     SIEQIKESIKDLPPMAVSFDIDDTVAATSGCFHYGKQKYSPDDFSYLKNQDFWDEINA
                     GCDKYSLPKQVAINLIKMHQERGDQVYLITGRTAGKNEQVTTIMQKYLGIKNMQPVNF
                     MGGKAHSTKYDKTPAIIEHKVQIHYGDSDDDILAAREAGIRGIRILRAANSNYTPFPQ
                     AGGYGEEVVVNSSY"
     gene            1845..2606
                     /gene="udp"
                     /locus_tag="PXD18_002288"
     CDS             1845..2606
                     /gene="udp"
                     /locus_tag="PXD18_002288"
                     /EC_number="2.4.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine phosphorylase"
                     /protein_id="HDL6302670.1"
                     /translation="MSEVFHLGLTKAMLKGAKIAIVPGDPARSERIAKKMDNPEFLAS
                     TREFTSWLGYLDGEPVVVCSTGIGGPSVSICVEELAQLGVRTFLRIGTTGAIQEHINV
                     GDILITTGAVRLDGASQHFAPMEYPAVANFECTNALYAAAVESGVTPYVGITASSDTF
                     YPGQERYDTFTGKIYRHFQGSLKQWQDLNVMNFEMESATLFTMCSALGLRAGMVAGVI
                     VNRTQQEIPNEATIHDTEHKAVSVVVEAARKLIKG"
     gene            2681..3277
                     /locus_tag="PXD18_002289"
     CDS             2681..3277
                     /locus_tag="PXD18_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302671.1"
                     /translation="MKKWLMLITLIFGITACFSSLEFDESKQEKINSFLIVGNKLYVV
                     GELHDYEFEHQQVAELNNFLKSLIANKIKSVEANFEVKESKKVEGSYRIILDGKSLTE
                     SERSTVMDTFHFNSAQNPSITYQAEGNLVKLANREELLQKFRFKQALEANVRYYKMKS
                     GLQNTAEGALSIVMLPVAVVAVLPFYMFWVGACATYGC"
     gene            3288..3773
                     /locus_tag="PXD18_002290"
     CDS             3288..3773
                     /locus_tag="PXD18_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HDL6302672.1"
                     /translation="MYSLYLKILSECDWCCDPKTLSTYQQEWLLHEGSLTQKLYDVAT
                     NFNVEVVQEKWIAKNSEKTTACNEDVWSREVLLKDGEKNWIFAQTLVPRSTIENIAQN
                     VLELGNQPIGLWLFSQNPTRTKLEWTQTENGLFARRGVYEIRGYSLEIRELFLETFPY
                     L"
     gene            complement(3811..4680)
                     /locus_tag="PXD18_002291"
     CDS             complement(3811..4680)
                     /locus_tag="PXD18_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDL6302673.1"
                     /translation="MKNINTQAVGWIGLGQMGEPMAKHLLNSGVNVGVYNRDPAKAEK
                     VVEAGGTLYPSVLELVKAYDVIFLMIADYAAVQQVLSDEVLAELNGKVVVNMSTISPS
                     QNQAVEALLAQHGAEFVEAPVSGSSKVAEAGKLLVLAAGKEETVELLKPLFAAFSTTT
                     FYYGEVGKAGGIKLMINSLLGIFIQAYGEALNFADQYGIPKEKVIEMISGSFMNSPIF
                     QAKVPMYQANEFPPAFMMKHMTKDFNLASEEIAKLGKSYPLIEQATKTYNQANDSGLS
                     EVDMAAIYQFLAK"
     gene            4810..5601
                     /locus_tag="PXD18_002292"
     CDS             4810..5601
                     /locus_tag="PXD18_002292"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HDL6302674.1"
                     /translation="MKPTILLYDSGMGGLTIYDEIRKVLPHAHYLYCFDNAFFPYSEK
                     SEAVLIERAVKIVQKIAEKQPLDMVVVACNTASTVVLPALREHFNFPIVGTVPAIKPA
                     AAISETKVIGLLATKGTVARPYVDELIRKYAQDCTVEKIGTTDLVEIVEEKQRSGKVD
                     MNRLQKVVEAWQGKPELDTVILGCTHFPLVKAELQQLLPDVKYFVDPGVGIAKRVLSL
                     LEERKFQQKADFENQAFCTKQSSAFNIKQDVMQNWGFNNLSVIDI"
BASE COUNT         1766 a          989 c         1182 g         1740 t
ORIGIN      
        1 gtagctgtta tcagttcaac aattggtcgt cctgaattag aaagagctgt tttaagcgta
       61 caaaatcaga cttatccttg taaacattat gtttttgttg atggagagaa atatcaccaa
      121 caagcggctg atattttaaa gaattttcca agtgttattg ttacttatct cccaatgaat
      181 accggggctg atggttgggt aaatagcagc attaatgcaa ttgcaccatt tttagtgaaa
      241 gaagatatta tttgttatct ggatgatgat aattggtttg aacctactca cgttgaatct
      301 ggtgtgcatg ctttattaga aatgcaatct gattatgctt actctttacg taatttttat
      361 gatttagatg gcgagttttt gtgtattgat acgattgaat cgttgggaga atataattgc
      421 gtttatcaag aaccattaga atgtaattat caattaggtg gtgttaaagg tgttttatca
      481 ataaatctga atgattgtca gcatattgat acgaattgct attttattcg tagtgagata
      541 gctcgcctta tcagtacggc ttggtacaca ggtattcata atgatagaaa tgtatataaa
      601 aaattacaag aattggcact aaaaggaaat tgtacaaaga aagttacggt taattatact
      661 cttgatacac gtaaatatta tggatcagta tttaatgaat tattagagga gccattttta
      721 ttaagcgaat atgatgccta tcaatttacg aatgaggtga ttaaatttca ttcagaagaa
      781 agccttaaag cttggggagg ttgcttgatt tgggaacaga acaatggctc ataagcgtta
      841 agcgtaatcg tttgcttgtg atcatattca caaaataagg tttttgtatt agctaagagt
      901 gcctaataag attaaaatag gtatggttaa tcatatggag gtattttata aaatttacat
      961 taaaaatgac ggcagcgaca atgtttgcat ctcttattgc tttttcagca caagcaggcg
     1021 gaccaaaagt agcttatacc cagccgggaa ttgatatgcg aacacatgaa gcacagcaag
     1081 cgccaattca ttgggtatct attgagcaaa ttaaagaaag catcaaagat ttacccccta
     1141 tggcggtaag ttttgatatt gatgatactg ttgctgcaac tagcggttgc ttccactacg
     1201 gaaagcaaaa atattcgcca gacgatttca gctacttaaa aaatcaagat ttttgggacg
     1261 aaattaatgc tggctgtgat aaatattctt tgccaaagca agttgctatt aatttaataa
     1321 aaatgcacca agaacgtggt gatcaagttt atttaattac ggggcgtacc gcaggtaaaa
     1381 atgaacaagt tacaacgatt atgcaaaagt atcttggtat taaaaatatg caaccggtaa
     1441 attttatggg ggggaaagca cattcaacaa aatatgataa aacccctgcg attattgaac
     1501 ataaggtgca aattcactat ggtgacagtg atgatgatat cttagctgcc cgtgaagccg
     1561 gtattcgagg tattcgtata cttcgtgcag caaattctaa ttatacgcca ttccctcagg
     1621 ccggaggata tggtgaagaa gttgttgtca attcaagtta ttaatttctt agtctgaaat
     1681 atggccacca ttgcgtggcc atcatttttt atttatataa tgacgaaacc gtttaccttt
     1741 gatctagttc acaaaatcaa actttgcttg caaaaaattg tcgtaaatta accgcttgct
     1801 aagatagaat ggctcatatc cagttagata aaaaggagat aaaaatgtct gaagtatttc
     1861 atttaggttt aaccaaagct atgctcaaag gtgcaaaaat tgcaatcgtt ccgggcgatc
     1921 cggctagaag tgaacgtatt gccaaaaaaa tggacaaccc agagttttta gcctcaaccc
     1981 gtgaatttac ctcttggtta ggttatttag atggcgaacc ggtggtggtt tgttcaaccg
     2041 gtattggcgg accgtcggtg tcgatttgtg tggaagagtt agcacagtta ggtgttcgca
     2101 cattcttacg cattggcaca acaggtgcaa ttcaagagca tattaatgta ggcgatattt
     2161 taattaccac cggagcggtg cgtttagatg gtgcgagcca acattttgca ccaatggaat
     2221 atcctgcagt agcgaatttt gaatgtacta atgctcttta tgcagcagca gtggaatcag
     2281 gcgttacacc ttatgtgggg attacagctt catcagacac tttctacccg gggcaagaac
     2341 gttacgacac tttcaccggc aagatctatc gtcatttcca aggttcatta aaacagtggc
     2401 aagatctcaa tgttatgaat tttgaaatgg aatccgccac tctctttacg atgtgttcgg
     2461 cattaggctt gcgagcaggt atggttgctg gtgtaattgt aaaccgcact caacaagaga
     2521 ttccgaatga agcaaccatt cacgacaccg aacataaagc cgtttcggta gtagtggaag
     2581 cggcaagaaa attaattaaa ggctaatctt taaatttaaa agcaaaaaag gtaaattgtc
     2641 tttgttacaa tttacctttt ttctttttag ggagctttct atgaaaaaat ggttgatgtt
     2701 aattacatta attttcggca ttaccgcttg tttttccagt ttagaatttg atgaaagtaa
     2761 acaagaaaaa atcaattcat tcttgattgt tggtaataaa ttatatgtgg tgggtgaact
     2821 gcacgattat gaatttgagc atcagcaagt tgcggaactg aataattttc tcaaaagcct
     2881 aattgctaat aaaatcaaat ctgttgaggc aaacttcgag gttaaggaat ccaaaaaagt
     2941 ggaaggtagt tatagaatta ttttagatgg gaaatcactt acagaaagtg aaagaagtac
     3001 ggtgatggat acctttcatt ttaattcagc tcaaaatcca tctattactt atcaggcgga
     3061 agggaacttg gtgaaattag ccaatagaga agagcttttg caaaaattcc gatttaaaca
     3121 agcgcttgag gcgaatgtgc gttattacaa aatgaaaagt ggtcttcaaa atacggctga
     3181 aggagcgtta agtattgtaa tgttgcctgt tgctgtagta gctgttttac cattctatat
     3241 gttttgggtt ggtgcttgtg ccacttacgg atgttaaata actttttatg tattctctat
     3301 acctgaaaat tttatcggaa tgcgattggt gttgtgatcc aaaaacactt tctacctacc
     3361 agcaagaatg gcttctgcac gaagggtcac ttacccaaaa attgtatgat gtcgcaacca
     3421 atttcaacgt ggaagtagta caagaaaagt ggattgcaaa aaacagtgaa aaaacgaccg
     3481 cttgtaatga agatgtttgg tcgcgagaag tgttactgaa agatggtgaa aaaaattgga
     3541 tttttgccca aactcttgtg ccaagatcaa caatcgaaaa tatcgctcaa aacgtgttgg
     3601 aattgggcaa tcagccgatt ggtttatggc tattttctca aaatcctact cgcaccaaat
     3661 tagaatggac acaaacagag aacggtttat tcgctcggcg tggggtgtat gaaattagag
     3721 ggtattctct ggaaattcga gagctttttt tagaaacctt tccttattta taaaaaaatc
     3781 ggttggtaat gacaccaacc gattttcatc ttattttgcc aagaactgat aaattgcagc
     3841 catatccact tcgctcaagc ctgaatcatt ggcttgattg taggttttag tggcttgctc
     3901 aataagcggg taagatttgc ctaatttcgc aatttcttcg cttgccaaat taaaatcttt
     3961 ggtcatatgt ttcatcataa acgcaggcgg aaattcatta gcttggtaca tcggcacttt
     4021 tgcttggaag atcgggctgt tcataaacga gcctgaaatc atttcgatta ctttctcttt
     4081 cggaatgcca tattggtcgg cgaagtttaa cgcctcgcca taggcttgaa tgaagatgcc
     4141 cagtagcgag ttgatcatca atttaatccc accggcttta cccacttcac cataatagaa
     4201 agtggtggta ctaaaggcag cgaaaagcgg tttgagcaac tcaacggttt cttctttacc
     4261 ggcagccagt accaatagtt tacctgcttc tgccactttg cttgaaccgg aaaccggagc
     4321 ttcaacaaat tctgcaccgt gttgggctag tagagcttct accgcctggt tttggcttgg
     4381 ggaaatggtg ctcatattca ccactacttt gccgtttaat tcagccaaca cttcatcgct
     4441 taacacctgt tgcacggcgg catagtctgc aatcatcaag aaaatcacat cgtaggcttt
     4501 caccaattcc aacacagaag gatataatgt gccgcctgct tcaactacct tttctgcttt
     4561 tgctgggtcg cggttgtaaa cgcccacgtt cactccgcta tttagcaaat gttttgccat
     4621 cggttcgccc atttgcccta aaccaatcca accgactgct tgtgtattaa tgtttttcat
     4681 tatttttctc cttactgaat aaagcaaatt gattattgcg attttccctc atcaagtcaa
     4741 atagagagaa cttgaatata gcaatggaaa agagtagcat tttagcactt acttttttga
     4801 acaataccaa tgaaaccaac aattctttta tacgattccg gaatgggcgg attgacgatt
     4861 tacgatgaaa tccgaaaagt gttaccgcac gctcactatt tatattgctt tgataacgct
     4921 tttttcccat attccgagaa gtcggaagca gttttaattg agcgagcggt caaaattgtg
     4981 caaaaaattg cagaaaaaca accgcttgat atggttgttg ttgcttgtaa tacggcaagc
     5041 acagtggttc tgccggcatt gcgtgagcat tttaattttc cgatagtagg aactgtaccg
     5101 gcaattaaac cggcagcggc aatttccgaa actaaagtca tcggcttgct cgccactaaa
     5161 ggcacggttg ctcgccctta tgttgatgaa ttgataagaa aatatgctca ggattgtacg
     5221 gtagaaaaaa ttggcacaac cgatttggtt gaaattgttg aagaaaaaca acgaagcggt
     5281 aaagtggata tgaaccgact acaaaaagtg gtcgaggctt ggcaaggtaa gccggaattg
     5341 gatacggtta tactcggttg tacccatttt cccttagtca aagctgaatt acagcaatta
     5401 ttgcccgatg tgaaatattt tgttgatccg ggtgtaggta ttgccaaacg ggtgctaagc
     5461 cttttggaag aacgcaaatt tcaacaaaaa gccgattttg aaaatcaagc attctgcact
     5521 aaacaaagtt ctgcatttaa tatcaaacaa gacgttatgc agaattgggg atttaataat
     5581 ctttcggtga ttgatattta aacaaaacaa tctgttttga tgaaaaaagg ttcagttgag
     5641 caaaaacttt aaaaaagggc ttgcactcaa ttttaaa
//
LOCUS       DANLXD010000129         5652 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.130, whole genome shotgun sequence.
ACCESSION   DANLXD010000129 DANLXD010000000
VERSION     DANLXD010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5652
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.130"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(47..427)
                     /locus_tag="PXD18_002293"
     CDS             complement(47..427)
                     /locus_tag="PXD18_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302675.1"
                     /translation="MNNKRIKPEQFADFITQRTGRNLTCPICNSQEHYLHDGYDTFTE
                     LCGEKIIGVPTIPYRIEPSPDEVMKFAAPEFHSLHFNEREGTKYWLDQKARTAVIVTC
                     VCCNNMLFFDRERILEWIKGSQNE"
     gene            complement(478..1137)
                     /locus_tag="PXD18_002294"
     CDS             complement(478..1137)
                     /locus_tag="PXD18_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HDL6302676.1"
                     /translation="MTTLGSRIKAYREQLGISQYEVAERCTSIDNRDKNNKWGQSRIA
                     NYERNNRTPDLDDIEILSKVLGVSPETLAFDTNVQLARPTKSNSYPLISNIQAGLWTE
                     AFDFKDSEGYDYIDTEIDAGPDAFFLRISGMSMEPKFSEGDLVLIDIRKRPHPGDYVA
                     AVNGTGEATLKRYRELGEWSESGNPHFELIPLNPDFPTLSSMKQDIRIIGVAVEHRSY
                     L"
     gene            1267..1473
                     /locus_tag="PXD18_002295"
     CDS             1267..1473
                     /locus_tag="PXD18_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005656653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6302677.1"
                     /translation="MNKIAEIRNQIGISQAQLAVQIGWGQPRIANYETGNRTPSIYVA
                     QKIVEGLNELGANVRIDDVFPVGN"
     gene            1494..1754
                     /locus_tag="PXD18_002296"
     CDS             1494..1754
                     /locus_tag="PXD18_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302678.1"
                     /translation="MPRNELTKNARAIADLIHRKSATVTHKKLARAIGLSESQFSRTF
                     ADNVEMVAVIIDYLSIELADKDELLELKEKRYKRINLEEATT"
     gene            1918..2088
                     /locus_tag="PXD18_002297"
     CDS             1918..2088
                     /locus_tag="PXD18_002297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302679.1"
                     /translation="MKNQRNDTQKSSLWQEFEYRKRLKNLIESGLSVAEIETRSQQIY
                     EELKSECTTEAN"
     gene            2063..2932
                     /locus_tag="PXD18_002298"
     CDS             2063..2932
                     /locus_tag="PXD18_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HDL6302680.1"
                     /translation="MNAQPKQINPILKLHPKQSEAKKVSVDDGYTQIPNELLKAILRS
                     GVLGWKGSYLLATVLKTLSWHKESDWFTHSQVCEMMNIEPTKYHINQLSAARKELIRE
                     NILFEDGKETGVNLSVFEWKMVYPEKVGSSRNNRELIPEKVGNGYPEKVGNTKETITK
                     EKINNEFTNVNSVQQPETSLPKKTKSEPVDYQGVMEEFNRAVEDTPIPQIRAMSDERK
                     RSVHALAKILRKEFGGYTRQHFADYFNDFVRQASSRKDRFYFGGLDGSAWVANFGYII
                     RSKTFYKTWEDSL"
     gene            2929..4290
                     /locus_tag="PXD18_002299"
     CDS             2929..4290
                     /locus_tag="PXD18_002299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase"
                     /protein_id="HDL6302681.1"
                     /translation="MSQNLKNITYEVEYLLVGALLKSGLNSKARDVLSWLEPEMFATF
                     QLGVIYEAIRKQALKDNVIDMLLLNTDYGQDFATLAEIMKNTISGANLDGYAEKVRQY
                     HQRREAQRVFLDVAGELQNARDEQLDAITSTGLAHLSKLLQRGGKVKPIDMNDLLEGY
                     LELFQERAKPSFKERLLFTGIEALDGKLGGINDTDICIVAGRAGNGKTETAITFTKNI
                     IENKGSVLFFSLEMSKEQIMDRLIASASGVNSVKLRNPEMMNDEDFARMGTAIQPLQN
                     QQLYIVDKSGLTAEEIVAIAESHIQEYGKVSAVVIDYIGLVRHGKLDGKINRTYQIGE
                     SMERFKTFCKNNHTPMILLAQLNRNADGSRPTNADLRDSGSLEQDASQIIMVHNQRNK
                     DGEPAPYTEWIVTKNRFGANGTVYMQFQQGRFVECDQAEAREYFQPKETKTSSNKRYG
                     AMQ"
     gene            4287..4823
                     /locus_tag="PXD18_002300"
     CDS             4287..4823
                     /locus_tag="PXD18_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HDL6302682.1"
                     /translation="MTDFDKNIKYKIIYADPPWKYKDSGCNGSAENHYTTMNIKEICD
                     LPVQDISDKDSILFLWVTYPMLPEGLKLIEAWGFNYKTIGFQWVKTNKKNKNSFFFGL
                     GRWTRGNTECCLIATKGKPSRVSNKVSQLIIEPIQHHSKKPDIVREKIVELMGDLPRI
                     ELFARNKTQGWDVWGDEV"
     gene            4914..5129
                     /locus_tag="PXD18_002301"
     CDS             4914..5129
                     /locus_tag="PXD18_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302683.1"
                     /translation="MITYKCPKCNGELEDLSINDEWGWFLDEPYRCNGHYTGRFPNIS
                     RDSTLNRTKSCGYFSKEEVKKVNGTQR"
     gene            5113..5619
                     /locus_tag="PXD18_002302"
     CDS             5113..5619
                     /locus_tag="PXD18_002302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1367 family protein"
                     /protein_id="HDL6302684.1"
                     /translation="MAHSVNDIVKAHGRRYKARLKIQMIKMQGGVLVPLNEREAEALV
                     SLKNGEQYEIEVIRTRNPAFHRKVFAFLNFCFEYWSADKTEWEFFDERKQFDTFRKNL
                     TVLAGFKEITYTLDGRMRVEAQSLSYGNMEQDEFEQVYKALINAAIKHVFNNTKDENR
                     INQLYSFF"
BASE COUNT         1856 a         1000 c         1245 g         1551 t
ORIGIN      
        1 taaggatagt atgattgcat ctctaggatc attttgaatc attggtctat tcattttgtg
       61 agcccttaat ccattctaaa attctctctc tgtcgaaaaa aagcatatta ttacagcaaa
      121 cacaagtgac aataacggct gttctcgctt tttggtctaa ccaatatttt gttccttccc
      181 gttcattgaa atgcaaagaa tgaaattcag gagctgcaaa tttcataact tcatcaggag
      241 atggctctat tcggtatgga atggttggaa caccgataat tttctctccg cataattccg
      301 taaaagtgtc atagccatcg tgtaaataat gttcttggct attacaaata gggcaagtta
      361 aattccgccc agtacgttgc gtgataaaat ccgcaaactg ttcaggttta atgcgtttat
      421 tattcatttt aacttccttt ctacccaata aaattcaact gttagctttg gtggacttta
      481 caaatagctt ctatgctcaa cagcgacacc aataatacga atatcttgtt tcattgagct
      541 gagtgttgga aagtcggggt taagcggtat tagctcaaaa tgaggattgc cggattcaga
      601 ccattcgcct aactcccgat aacgttttaa agtagcctca cctgtgccat taaccgctgc
      661 tacataatcg cccgggtgag gacgtttgcg aatatcgatt aacaccagat cgccttcact
      721 aaatttaggc tccatcgaca ttccggaaat tcttaaaaag aaagcgtccg gtccggcatc
      781 aatttccgta tcgatatagt cgtagccctc cgaatctttg aaatcaaagg cttctgtcca
      841 taaacccgct tgtatattgc tgatcaacgg atatgagttc gattttgtcg gtctggcaag
      901 ctgaacgttt gtatcaaaag caagtgtttc tggagaaaca ccaagcactt tgctgagtat
      961 ttcaatatca tcaagatcgg gagtacgatt gtttctctca taattagcaa tgcgagattg
     1021 cccccatttg ttatttttat ctcgattatc tattgatgta catctttcag caacttcata
     1081 ttggctgatt cctagctgtt ctctgtaagc cttaattcta ctacctaagg ttgtcatagc
     1141 actctcctat tagattttcc tcattttaac acgctccgtt atatccttgt gaatcacaaa
     1201 atgaaattta caattagttc attttgtgat ttaattaaaa gatataaatc acaaagagaa
     1261 atttgtatga ataagatagc tgaaatacga aaccaaattg gtataagtca agctcagtta
     1321 gctgttcaga ttggttgggg gcaaccaaga atagctaact atgaaactgg aaatcgtacc
     1381 ccatctattt acgttgctca aaaaattgtt gagggattga acgaattagg tgcaaacgta
     1441 cgaattgatg acgttttccc cgttggcaac taatttaccc caagaggctt gcaatgccac
     1501 gcaatgaatt aacaaaaaat gcaagagcga ttgcggattt gattcatcga aaatccgcaa
     1561 cggtgacgca taagaaacta gcaagagcaa tcggactgag tgaatcacaa tttagccgta
     1621 catttgcaga taatgtggaa atggtggcgg tgattattga ttacttaagt attgagcttg
     1681 cggataaaga cgagttacta gagctgaaag agaaacgata taagcgaata aatctcgaag
     1741 aagcgacaac atagaagtta ccaacaatga aaaatttttt agaaaaattc aaatcattct
     1801 accacagtaa aaattcaatt tttattagag tggcaatttt tatgctgctt gcgtggtggg
     1861 tttttaacaa ttaaaaaacc accgctggaa cggtggtaat ttacaaggag ttaccttttg
     1921 aaaaatcaac gcaatgatac acaaaaaagc tccttatggc aagagtttga atatcgaaaa
     1981 cggttaaaaa atctcattga aagcggttta tccgtagccg aaattgaaac ccgttcacaa
     2041 caaatttatg aggagctgaa aagtgaatgc acaaccgaag caaattaacc caattttaaa
     2101 attgcaccct aaacaatcag aggctaagaa agtgagtgtt gatgatggtt atacacaaat
     2161 tccgaatgag ttattaaaag caattttgcg atcgggtgtt ttaggttgga aaggctctta
     2221 cttactggct accgtcttaa aaacattgtc ttggcataaa gaaagtgatt ggttcacgca
     2281 ttcccaagtg tgtgaaatga tgaatattga gccgacaaaa taccatatta atcaactttc
     2341 cgctgctcga aaagaactta tccgtgaaaa tatcttgttt gaagatggta aggaaacagg
     2401 ggtaaatctc agtgtttttg aatggaaaat ggtatatccc gaaaaagtag ggagttcccg
     2461 aaataatagg gaattaattc ccgaaaaagt agggaatggg tatcccgaaa aagtagggaa
     2521 cacaaaagaa actattacaa aagaaaaaat aaataatgaa tttactaacg taaattctgt
     2581 gcaacagccc gagacctctt tgccgaaaaa aacaaaatct gagccggtcg attatcaagg
     2641 agtgatggaa gaatttaatc gtgctgtgga agacacaccg attccgcaaa ttcgggcgat
     2701 gagtgatgag cgaaagcgat cggttcacgc attagcaaaa atcttgcgaa aagaatttgg
     2761 tggctacacc agacaacact ttgccgatta cttcaatgat tttgtccgac aggcaagtag
     2821 ccggaaagac agattttatt ttggcgggct tgatggctcg gcttgggtag caaatttcgg
     2881 ctacatcatt cgttcgaaaa cgttttataa gacttgggaa gattcgctat gagccaaaat
     2941 ttgaaaaata tcacttacga ggttgaatat ttgctggttg gagcattgct gaaatccggt
     3001 cttaactcga aagctaggga cgtattgagc tggttagagc ctgaaatgtt cgctaccttt
     3061 caacttgggg tgatttatga ggctatccgc aagcaggcgt tgaaagataa cgtgatcgat
     3121 atgctgttac tcaataccga ctacggacaa gattttgcca cgttggcaga gataatgaaa
     3181 aacacgatca gcggtgcaaa cttagacggc tatgcagaaa aagtccggca atatcatcaa
     3241 cgccgagaag cccagcgagt gtttttagac gttgcaggtg agttgcaaaa tgcccgagac
     3301 gagcagttag atgctatcac ttcaaccggg ttagctcacc taagcaaatt attacaacgt
     3361 ggcggaaaag tgaaaccgat tgatatgaat gatttgctcg aaggttattt ggaattgttc
     3421 caagaacgtg caaaaccaag ttttaaagag cgtttgttgt ttaccggtat agaagcatta
     3481 gatgggaaac taggcggtat taacgatacc gatatttgca ttgtagcagg acgtgccggt
     3541 aacggtaaaa ccgaaacagc catcacgttt actaaaaaca ttatcgagaa taaaggttcg
     3601 gtgctgttct tctcgctgga gatgagcaaa gagcagatta tggataggct gattgccagt
     3661 gcaagcggtg taaattcagt aaaacttcgc aatccggaaa tgatgaatga tgaagatttt
     3721 gcccgaatgg gaacggcgat tcagccttta caaaatcagc agttgtacat tgttgataaa
     3781 agcggattaa ccgcagaaga gattgtggcg attgcagaga gccatattca agagtacggc
     3841 aaagtgagtg cggtagtgat tgattatatc ggtttggttc gacacggcaa actagacggc
     3901 aaaattaacc gaacctatca aatcggtgaa agtatggagc ggtttaaaac tttctgcaaa
     3961 aacaatcaca caccgatgat tttattggca cagcttaacc gcaatgcaga tggcagtcgc
     4021 ccaaccaacg cagatttgcg agacagtggc agtcttgaac aagatgcaag ccaaatcatt
     4081 atggtgcata accaacgcaa caaagacggc gagccagccc cctatacaga atggattgtt
     4141 actaaaaatc gctttggagc aaatggcacg gtttatatgc aattccagca gggtaggttc
     4201 gtagaatgcg accaggcaga agcgcgggag tatttccagc cgaaagaaac taaaacatca
     4261 tcaaacaaac gctatggagc aatgcaatga cagattttga taaaaatata aaatacaaaa
     4321 ttatttacgc agatccgcct tggaagtata aggatagtgg ctgtaatggg agtgcagaaa
     4381 accattacac aacaatgaat atcaaagaaa tatgtgattt acccgtccaa gatatttcag
     4441 acaaagattc tattctgttt ttgtgggtta cttaccctat gttacctgag ggcttaaagt
     4501 tgattgaggc gtgggggttc aactataaaa caatagggtt tcaatgggtg aagacaaata
     4561 agaagaataa gaattctttt ttctttggct tgggacgatg gactagaggt aataccgaat
     4621 gctgtttaat tgcaacaaaa ggaaagccat cgagggtaag caataaagtg agccaattaa
     4681 ttattgagcc aatacaacat catagtaaaa agcctgacat tgtcagagaa aagatagttg
     4741 agttgatggg tgacttgcca agaatagagt tgttcgccag aaataaaacc caaggttggg
     4801 atgtttgggg ggatgaggtg tgattgtttc aagctattgt tacccaaagt gcggtagggt
     4861 tttattaaaa aggttggcgg ttgtgaagga taacgaaggt tgggacggtt tagatgatta
     4921 cttataaatg ccccaaatgc aacggagagc ttgaagattt aagtattaat gatgaatggg
     4981 gttggttttt agatgagccg tatcgttgca acggacacta tacagggcgg tttccaaaca
     5041 ttagccgaga tagcacgtta aatcgcacaa aatcctgtgg gtactttagc aaggaagagg
     5101 ttaagaaagt aaatggcaca cagcgttaat gacatcgtaa aagcccacgg caggcgttat
     5161 aaagcaagat tgaaaataca gatgataaaa atgcaaggag gcgttttagt cccccttaat
     5221 gagcgtgaag ctgaagcatt ggtatcactt aaaaatggcg agcaatatga aattgaggtt
     5281 attcgcactc gcaatccagc ctttcatcgg aaggtcttcg cctttttaaa tttttgcttt
     5341 gaatattggt cggcagacaa aaccgaatgg gagttttttg atgagaggaa acagtttgat
     5401 actttccgaa aaaatctgac tgttctggca ggatttaaag aaatcacata caccctagat
     5461 gggcgtatgc gtgtagaagc tcaaagtctt agttacggaa atatggaaca agacgagttc
     5521 gagcaggttt acaaagcatt gattaatgca gctatcaagc acgttttcaa caataccaaa
     5581 gatgagaata ggataaatca gttgtattcg tttttttaat taaggcgaaa tcgccatatt
     5641 taattaggtt ta
//
LOCUS       DANLXD010000130         5643 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.131, whole genome shotgun sequence.
ACCESSION   DANLXD010000130 DANLXD010000000
VERSION     DANLXD010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5643
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.131"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            48..737
                     /locus_tag="PXD18_002303"
     CDS             48..737
                     /locus_tag="PXD18_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HDL6302685.1"
                     /translation="MSTLSRDSILSQIQNGLIASCQPVDDGPMDKPEIVAAMAAASVI
                     GGAKGIRIEGVDNLKAARAAVNVPIIGIVKRDLPDSPVRITPFLEDIDALAEAGADII
                     AVDGTFRTRPVSIEEAVKRIHEKGCLAMADCSTLEEGLHCQQLGFDIVGSTMSGYTGG
                     EMPDEPDYQLVKDLKAAGCNVMAEGRYNTPELAKTAIEIGADYVTVGSALTRLEHIVS
                     WFADSVKSAQK"
     gene            747..1649
                     /locus_tag="PXD18_002304"
     CDS             747..1649
                     /locus_tag="PXD18_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine kinase"
                     /protein_id="HDL6302686.1"
                     /translation="MRCLAIDIGGTKIATAIVQHNQVSQRQQIQTPTDKPQADQAGSL
                     HQAIGEIMQHYQGQFDFVAVASTGIINKGVLTALNPKNLGGLAEFPLKQSIEKHTDKP
                     IALLNDVQAAVCAEYLNEDQQAVKNFVFITVSTGVGGGIILNGELQIGSNGIAGHIGH
                     TLADPNGPLCGCGRVGCVEAVAAGRAIEAVSSQWEKPCSPKEVFERFRQGNPQAVELV
                     QKSAKAIANLIADLKISLDIQKVVLGGSVGLAEGYLPQVSNYLAEMPSVYHCVLENAL
                     SGQDAGLIGAAWWAENQLNQGFTL"
     gene            1674..2552
                     /gene="nanA"
                     /locus_tag="PXD18_002305"
     CDS             1674..2552
                     /gene="nanA"
                     /locus_tag="PXD18_002305"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005718701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HDL6302687.1"
                     /translation="MKNLKGIFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYV
                     GGSTGENFMLSTEEKKEIFRIAKDEAKDEIALIAQVGSVNLKEAVELGKYATELGYDS
                     LSAVTPFYYKFSFPEIKNFYETIIRETGNKMIVYSIPFLTGVNIGVSQFAELFENEKI
                     IGVKFTAGDFYLLERLRKAFPNHLIYAGFDEMMLPATVLGVDGAIGSTFNVNGIRARQ
                     IFELAQQGKIKEAFEIQNVTNDLIEGILGNGLYQTIKGLLELEGVQAGYCREPMTKEQ
                     TPAQKEVTKQLKAKFL"
     gene            complement(2613..2819)
                     /locus_tag="PXD18_002306"
     CDS             complement(2613..2819)
                     /locus_tag="PXD18_002306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302688.1"
                     /translation="MDNKQTNGFNDIIVKADITQNIWSTGFYDIGRELKSENTRQEKV
                     RLKYNGDTLHRGRKSRMASLIASR"
     gene            complement(2777..3415)
                     /locus_tag="PXD18_002307"
     CDS             complement(2777..3415)
                     /locus_tag="PXD18_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302689.1"
                     /translation="MKKILLLVLLLTLATQADEGNNTQVCAEQQHQIIAHYFKISQEK
                     LSARTLASACKTAPNNSTETLVSYAVIEPKYSKENYQNDENTPKWTLFVARVNDNAIL
                     QSWEQDMEIDASIDVNADSLKIDTARYILNDKVRAFGVRFNNAARGPSAPEYSANDHL
                     MLFVPEKEKLKLVFDYPMTFWSILDDKETKTETQTWYCKWITNRPTASMILL"
     gene            complement(3657..4376)
                     /locus_tag="PXD18_002308"
     CDS             complement(3657..4376)
                     /locus_tag="PXD18_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6302690.1"
                     /translation="MSKPNIYDESFSERMKWIAKNSFKDNYSEFARAVGVAQASLSRW
                     VKGEADPSRSNLVKIAEVSNVSLEWLATGKESKPQSENTSIVAREFERLEKMADDIVS
                     MINSFRTINVSAGFGSFNEGVTKPDGQEPYADSLLQSLGVKAHNCGVFWANGTSMHPT
                     IADSDQMLVDFSKREPRGDDKIYLVQNGESVWVKRIRKEWDYIELISDNESYRPIQIT
                     AEEAQNLQIIGQVVHIGHSLV"
     gene            4553..4831
                     /locus_tag="PXD18_002309"
     CDS             4553..4831
                     /locus_tag="PXD18_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6302691.1"
                     /translation="MSVLNDVKKTAQRDWHKADILAELRKKGWSLRSLAKAGNVSHNT
                     LKSVLDKPYPKMERLVANAIGVAPEVIWAGRTAERIERNRRPTLTNKF"
     gene            4876..>5643
                     /locus_tag="PXD18_002310"
     CDS             4876..>5643
                     /locus_tag="PXD18_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6302692.1"
                     /translation="MSELSLKTHYSVAELLSFKLSSLPSAHKNVLEKAIRENWQSQKR
                     KGRGGGVEYELISLPTEVQQEIRTKLLKLLPAEISKGELSVVRQNIDLEQITDKQLST
                     ADARIMVVRWFLMQEVQLGLSRTKTLDQVIAAVASSEIPAEICKAIMAGNSKAGGKLK
                     LSKRTLHSWVLAYEAGENSAERLKQMIPLKTQKRAVPERCGWLQAFLPFYQTFSNVAL
                     TQAYAQFAMQYEGEDLPTESQVRYALKQLPDYVVQQGR"
BASE COUNT         1684 a         1146 c         1237 g         1576 t
ORIGIN      
        1 aaaatctagt ccattgacta ccttttgaac ataaaaaagg aactgttatg tcaacactat
       61 ctcgtgattc tattttaagt caaattcaaa acgggctgat tgcctcctgc caaccggttg
      121 atgacggccc catggataaa cctgaaattg tcgccgcaat ggcagcagcc tctgtgattg
      181 gtggtgctaa aggcattcgc attgaaggtg tcgataattt aaaagccgct cgtgcggcag
      241 tgaatgtgcc gattatcggc attgtaaaac gtgatttgcc agattcccct gtgcgtatta
      301 cgccattttt agaagatatt gatgccttag ccgaagccgg tgccgatatt attgcggtgg
      361 acggcacatt ccgcacccgc ccggtcagca ttgaagaggc ggtaaaacgc attcacgaaa
      421 aaggttgctt ggcaatggcg gattgctcca cccttgaaga aggtttacat tgccaacaat
      481 taggctttga tattgtgggt agtacaatgt ctggctacac cggtggcgaa atgcctgatg
      541 agccggacta tcaattagtg aaagatttaa aagctgccgg ctgtaatgtt atggcggaag
      601 gtcgctacaa cacgcctgaa ctggcaaaaa cggcgattga aatcggggcg gattacgtta
      661 ccgttggatc ggcattgacc cgcttagagc atattgtgag ctggtttgcc gactctgtaa
      721 aatcggctca aaaataggag ctgcttatgc gttgtttagc aatagacatc ggtggcacga
      781 aaattgccac ggcaattgtg caacacaatc aagtgtcaca acgccaacaa attcagaccc
      841 cgactgataa accacaagct gatcaggcag gcagtttgca tcaagcgatt ggtgagataa
      901 tgcaacatta tcaagggcaa tttgattttg tggcagttgc ctcaacaggc attatcaata
      961 aaggggtgct taccgcatta aatcctaaaa atttaggcgg attggcagaa tttccgttga
     1021 aacaaagcat tgaaaaacat accgataagc cgattgcatt attaaatgac gtgcaagcag
     1081 cggtgtgtgc cgaatattta aatgaagacc aacaagcggt caaaaatttt gtatttatta
     1141 ccgtttccac cggcgtaggc ggcggcatta ttttaaacgg cgaactgcaa atcggcagta
     1201 acggcattgc aggacatatc gggcatactc tagccgatcc gaacgggcct ctctgtggtt
     1261 gtggacgagt cggctgtgtc gaagcagtcg cagcagggcg tgcaatagag gcagtttcca
     1321 gccaatggga aaagccttgt tcaccgaaag aggtgttcga gcgattccgc caaggcaacc
     1381 cacaagcggt cgaattagta caaaaatctg caaaagcgat tgctaattta attgcagatt
     1441 taaaaatcag tttagatata caaaaagtgg tgttaggtgg cagtgtgggc ttagcggaag
     1501 ggtatttacc gcaggtgtcc aactatttag ctgaaatgcc gagcgtatat cattgcgtat
     1561 tggaaaatgc tctatccggg caagatgccg gcttaatcgg tgcggcttgg tgggcggaaa
     1621 accaacttaa tcaaggtttt actctttaac aaattctaac tccggagatc caaatgaaaa
     1681 acttaaaagg tatttttagt gcgttactcg tctctttcaa cgaagacggc accatcaacg
     1741 aaaaaggctt acgccaaatt atccgccaca acatcgacaa aatgaaagtg gacggtttat
     1801 atgtcggcgg ttcaaccggt gaaaacttta tgctttctac cgaagagaaa aaagaaattt
     1861 tccgcattgc caaagacgaa gcgaaagatg aaatcgccct tatcgcccaa gtcggtagcg
     1921 taaacttaaa agaggcggta gaactgggta aatatgccac agaattaggc tacgacagct
     1981 tatctgcggt cacaccgttc tactacaaat tcagcttccc ggaaatcaaa aatttctacg
     2041 aaaccattat tcgtgaaacc ggcaacaaaa tgattgttta ctccattccg ttcttaaccg
     2101 gcgtaaacat cggtgtgagc caattcgctg aattatttga aaacgaaaaa atcatcggtg
     2161 taaaattcac tgccggcgat ttctacctgt tagagcgttt acgcaaagcg ttcccgaacc
     2221 acttaatcta cgcaggtttc gatgaaatga tgctaccggc aacggtatta ggtgtggacg
     2281 gtgcaatcgg ctcaaccttc aacgtaaacg gtattcgtgc aagacaaatc tttgaattag
     2341 cccaacaagg caaaatcaaa gaagcatttg aaatccaaaa tgtaaccaac gatttaatcg
     2401 aaggcatttt aggcaacggt ttataccaaa ccatcaaagg cttattggag ttagaaggtg
     2461 tgcaagcagg ttactgccgt gagccgatga cgaaagaaca aactccggca caaaaagaag
     2521 tgaccaaaca gttaaaagct aaattcttgt aatttaagtt gcaaaaggct aaacgaaaat
     2581 caccgcttgt agtaacaagc ggtgattttt tctcaacgac ttgcaattaa tgaagccatt
     2641 ctgctttttc taccacggtg taacgtgtca ccattatatt ttaatcgcac tttttcttgg
     2701 cgagtatttt ctgatttcaa ctctctacct atatcataaa accctgtact ccagatattt
     2761 tgagtaatat ccgcttttac aataatatca ttgaagccgt tggtctgttt gttatccatt
     2821 tgcaatacca agtttgtgtt tccgttttgg tttctttatc atctaaaata gaccaaaaag
     2881 tcatcgggta atcaaaaaca agttttaact tttctttttc cggcacaaat aacatcaaat
     2941 gatcatttgc agaatactca ggagcacttg gaccacgagc agcattatta aacctcacgc
     3001 cgaaagctct tactttgtcg tttagaatat aacgggcggt atcaatttta agactatctg
     3061 cattcacatc gatagaggca tcgatctcca tatcctgctc ccacgattgc aatatcgcat
     3121 tatcattcac acgagcaaca aaaagcgtcc acttaggtgt gttttcgtcg ttttgataat
     3181 tttctttgct gtatttaggc tctattaccg cataactcac taaggtttcc gttgaattgt
     3241 taggagctgt tttacaggca gaagctaaag tacgagcaga aagtttctct tgagaaatct
     3301 taaagtaatg agcaataatt tgatgttgtt gctcagcaca aacctgtgtg ttattacctt
     3361 catctgcttg agttgcaagc gtaagtaaaa gaactaagag gagtatcttt ttcatataga
     3421 tttatccgta tagaaagata actcattcta tggggtactg actctttttg catagagaga
     3481 aagaaaaaaa tttggtcgga aaaataacgg cgagcctagc gaaaacaagg gttcgccgta
     3541 attttatggg ggaagctatg taaaaaacaa aatgagcagg attagaaaaa aatgagcagt
     3601 ttttgcgata ttttttgcat aggtttgatc ggttttaaaa ctattttaaa tctgttttaa
     3661 actaaagagt gtccgatgtg gactacctgc ccgatgattt ggaggttttg agcttcttcg
     3721 gcggtaatct gtattgggcg gtaggactcg ttatcgctaa ttaattcaat atagtcccat
     3781 tcttttctaa tccgtttaac ccatacgctt tccccattct gcacaagata aatcttatca
     3841 tcaccacgag gctctcgttt gctgaaatct accagcattt ggtcactgtc tgcaatggta
     3901 gggtgcattg atgttccatt tgcccaaaac acgccgcagt tgtgggcttt tacgccgagg
     3961 ctttgcagca ggctgtcggc gtaaggttct tgcccgtctg gcttcgttac gccctcgtta
     4021 aagctgccaa agcctgctga aacgttgatt gttctgaagc tgttaatcat tgaaacaata
     4081 tcatcagcca ttttttctag tcgctcaaac tctcttgcca caatactggt attctctgat
     4141 tgtggtttgc tttccttacc tgttgccagc cattcaaggc tcacatttga cacctctgct
     4201 atttttacaa gatttgaacg agatggatct gcctctcctt ttacccacct agatagtgat
     4261 gcttgggcta cccccactgc tcttgcaaac tcactgtaat tgtccttaaa gctatttttt
     4321 gcaatccatt tcattctttc tgagaagctc tcatcgtaaa tgtttggttt actcatcttt
     4381 tacgtttcca ttaataaagt tttactcgta aaacatactc ataaaccatt gatttttaag
     4441 ttatttatga ataaagcaaa aatattttag atgtttttat gttttacggt tgatttgttt
     4501 aaagttttac ggttaaatac acgcatcaaa tagataaaaa gaggtgtatc gaatgagtgt
     4561 attaaacgat gttaaaaaaa ccgcacagag agattggcat aaagccgata ttcttgcgga
     4621 acttcgtaaa aaaggttggt cacttcgttc tttggctaaa gcaggcaatg ttagccataa
     4681 cacgctgaag tctgttttag acaagcctta ccccaaaatg gaacgcttag ttgcaaatgc
     4741 cataggggtt gcccctgaag tgatttgggc tgggcgaaca gcagaacgca ttgaacgtaa
     4801 tcggcgacca actttaacta ataagtttta atcataaatg atctttaacg taaaagatat
     4861 aggagaagaa catttatgag cgaattaagt ttaaaaacgc actattcagt ggctgaattg
     4921 ttaagtttta agttatctag cctaccaagt gctcataaaa atgtgcttga gaaagcaata
     4981 agggaaaact ggcaatctca aaaacgcaaa ggcagaggcg gcggggttga atatgaatta
     5041 atcagtttac ccaccgaagt ccaacaggaa atccgcacca agttactcaa acttcttcct
     5101 gctgaaatca gcaaaggcga attgagtgta gtgcgacaaa acattgattt ggagcagata
     5161 accgataaac aactttctac ggcagatgct cgcattatgg tggtgcggtg gttcttgatg
     5221 caggaagtgc agttggggct aagccgcaca aaaacgctag accaagtcat tgcagcggtg
     5281 gcaagcagtg aaattcctgc tgaaatttgc aaagcgatta tggcgggcaa tagtaaagcc
     5341 ggtggaaagt taaagctatc taaacgcacc ttgcatagtt gggtgctggc gtatgaggca
     5401 ggcgaaaatt cagcggaacg gttaaaacag atgataccgc tgaaaacaca aaaacgtgcc
     5461 gtgcccgagc ggtgtggttg gttgcaagcc tttctgccgt tttatcaaac ctttagcaat
     5521 gtggcactca cacaggctta tgctcaattt gcaatgcagt atgagggcga agatttacct
     5581 acagagagcc aagttcggta tgccttgaag cagttgcccg attatgtggt gcaacaaggg
     5641 cgg
//
LOCUS       DANLXD010000131         5590 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.132, whole genome shotgun sequence.
ACCESSION   DANLXD010000131 DANLXD010000000
VERSION     DANLXD010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5590
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.132"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(307..1050)
                     /locus_tag="PXD18_002311"
     CDS             complement(307..1050)
                     /locus_tag="PXD18_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302693.1"
                     /translation="MLNKHINKIINSSFSLAFFTLTSFATAYCYGWGQAIFHGYPWWH
                     VEIGNASMARSLAYVFGTSVILFLCYALGYSLLNKVFQLHYFRNLGWLRVIVLVSVFT
                     VPVILTFYLFTGIVPIYISFIYIFVSGVSVFFFRKRWNNTKFDLDFRKMLLGGSFALF
                     NIFIFLYFSLLSLHIGYLRAGLRTTYDYIEIENQKYYILSTNSDNGYIMGTKIRGNQS
                     FLFFNRDTHQYYHVHIEQCTDSRLCKVIV"
     gene            complement(1221..1559)
                     /locus_tag="PXD18_002312"
     CDS             complement(1221..1559)
                     /locus_tag="PXD18_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6302694.1"
                     /translation="MKLITTIIQPSKLDQVQDALSEIGIQGMTITEVKGFGRQYGHTE
                     QELSQMSRIDFRPKIKVEILVSNYQTDEVIDAILNASYSGQVGDGKIYVANIEQVIRT
                     RTGETDDEAV"
     gene            1818..3716
                     /gene="dnaK"
                     /locus_tag="PXD18_002313"
     CDS             1818..3716
                     /gene="dnaK"
                     /locus_tag="PXD18_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005670448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HDL6302695.1"
                     /translation="MGKIIGIDLGTTNSCVAVMDGDKPRVIENAEGARTTPSIIAYTD
                     KETLVGQPAKRQAITNPKNTLFAIKRLIGRRFTDAEVQRDIEIMPFEISKADNGDAWV
                     TVKGDKLAPPQISAEILKKMKKTAEDFLGEPVTEAVITVPAYFNDAQRQATKDAGRIA
                     GLDVKRIINEPTAAALAYGLDSKKENQTIAVYDLGGGTFDISIIEIDNFDGEQTFEVR
                     ATNGDTHLGGEDFDNRVINYLVEEFQKEQGVDLRNDPMAMQRVKEAAEKAKIELSSAQ
                     ETEVNLPYITADATGPKHLNIKVTRAKLESLVEDLVNRSLEPLKTALADAGLSVGDIN
                     DVILVGGQTRMPLVQKKVADFFGKEPRKDVNPDEAVAIGAAVQGGVLSGSVTDVLLLD
                     VTPLSLGIETMGGVMTTLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKRAADN
                     KSLGQFNLEGINPAPRGMPQIEVTFDIDANGIINVSAKDKNTGKEQQIKIQASSGLSD
                     AEVEQMVRDAEANAEADKKFEELVQARNQADGIAHATRKQITEAGDALNADDKAKIEA
                     AISELETAAKGEDKAEIEAKIEALIKASEPLMQAAQAKAQGGEQPQQSQKDDGVVDAE
                     FEEVKDNK"
     gene            3858..4160
                     /locus_tag="PXD18_002314"
     CDS             3858..4160
                     /locus_tag="PXD18_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302696.1"
                     /translation="MLKLYPTTENVQPPFYKIYDHKSGETVIATETENSNTAILMDDF
                     VWFEQIPTTEALLADTWSVIENRSKQGLLKRAYTKDFEKHLADGKVEIYIAVNPHC"
     gene            4383..5522
                     /gene="dnaJ"
                     /locus_tag="PXD18_002315"
     CDS             4383..5522
                     /gene="dnaJ"
                     /locus_tag="PXD18_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HDL6302697.1"
                     /translation="MAKKDYYEVLGLSKGASEKDIKRAYKRLAAKHHPDKNQGSKESE
                     EKFKEITEAYDVLTDSEKKAMYDQYGHAAFEQGGAGAGGFGGFGGGGFGGFEDIFSEM
                     FGGGFGGGGRRQRVVRGDDLRYDIEITLEEAVKGCKKDIRIQTLAECDTCHGTGAEAG
                     SKVETCSHCHGSGRVRRQQGFFVTEAVCPSCHGTGKRIEKPCRSCHGDGRVQKAKNLS
                     VTIPAGVDTGNQLRLSREGAAGENGAPAGDLYVVIHVKEHDIFERDGSNLYCEVPISF
                     TLAALGGEIEVPTLDGKLKLKIPAETQTGKLFRVRGKGVTSPRGGYAGDLICKVVVET
                     PVNLTEEQKALLRQFEESLEGQGKHRPKHEGFFDGVKKFFDNLGK"
BASE COUNT         1812 a         1095 c         1206 g         1477 t
ORIGIN      
        1 ttatgttctt ttttattttg ttattctctt taggtataaa aaaacccggt aaataccggg
       61 cttttatttc aattggttat ccaacttgcg agagcaatta ccgcaataaa aataactaac
      121 caaataagtt gtaattttac gcttttgcgg ttgatctcct ggttgtgtaa tcggcgctgt
      181 tctaactttt gccgatatat cgctaaatcg gcttctttaa acgagaagcc acaatgtatg
      241 caatgttcta aactgtcgct aatacgcttt cgacactccg gacaacggtg taatgccata
      301 attacctcaa actattactt tgcataatcg gctatccgta cattgttcaa tatgaacatg
      361 gtagtattga tgagtatcac gattgaaaaa caagaaagat tgattacctc ttatttttgt
      421 tcccataatg tagccgttat cactgttggt ggataatatg tagtattttt gattctctat
      481 ttcgatgtaa tcataggtag ttcttagtcc ggcacgcaaa taaccaatat gcaatgagag
      541 caaactgaaa tagagaaaaa taaagatgtt aaacagggca aaacttcctc ctaatagcat
      601 ctttctaaag tccagatcaa acttggtatt attccatctc ttgcggaaga agaatacgct
      661 cacaccactt acaaaaatat agataaaaga gatataaatg ggcactatcc cggtaaataa
      721 gtaaaaagta agaataacag gcactgtaaa cacagaaacc aacacaatca cccttaacca
      781 acctagattt cggaaataat gcagctgaaa aactttattt agtaaactat aacctagtgc
      841 ataacacaag aataagatga cggaagtacc gaatacataa gccaaacttc ttgccatact
      901 ggcattgccg atttcaacat gccaccaagg gtagccatga aatatggctt gtccccaacc
      961 gtaacagtaa gcggtagcaa aactagttaa tgtaaaaaat gcaagagaaa atgaagaatt
     1021 gataatttta ttaatgtgtt tatttagcat aacaaagaat gtctatttcc attaaaacct
     1081 aactattttt gattactata ataacccgta ttacacaaaa aacaaacatt taattcacac
     1141 caaattagaa aatttgcttt agtaaggttg aaaatataac tctaaaacac gataataaaa
     1201 agcttctctg ctagcaatgg ctagactgct tcatcgtcag tttcgccggt acgggtgcgg
     1261 ataacttgtt caatattcgc tacataaatt ttgccatcac ccacttgccc agaataggat
     1321 gcattgagaa tggcatcgat cacttcatcg gtttggtaat tagaaaccaa tatctccacc
     1381 ttaattttag gacgaaagtc aatgcggctc atttggctaa gctcttgttc ggtatgccca
     1441 tattggcgtc caaagccttt tacttcggta atagtcattc cttgaatacc gatttctgaa
     1501 agtgcatctt gcacttggtc taattttgaa ggttggataa tggtagtaat cagtttcata
     1561 ttatatcctt ctctgtttga gttgccgtaa gtataaaaag ctattgaggg gtatgcaagg
     1621 taggaggtat tttctccgtg aaatattctg ccaaatctcc cccacataca agcggttact
     1681 ttttccaaaa attttgcaat ttttttattt ttgcccttga acagtgcatt ttcgtcccta
     1741 tttatgattt cgtctgaacg ggaaatgcaa tcccgtttct tattcaaact gaatttatta
     1801 ttataggaat cataaaaatg ggtaaaatca ttggtattga cttaggtaca acaaattctt
     1861 gtgttgcggt aatggacggc gacaaacctc gtgtaattga aaatgcggaa ggggcaagaa
     1921 caacgccatc tatcatcgct tacaccgata aagaaacctt agttggtcag ccggcaaaac
     1981 gtcaggcaat tactaacccg aaaaatactt tatttgcaat caagcgttta atcggccgtc
     2041 gttttactga tgctgaagtg caacgtgata ttgaaattat gccgtttgaa atcagcaaag
     2101 cagataacgg cgatgcgtgg gtaaccgtaa aaggcgataa attagcaccg ccgcaaatct
     2161 ctgctgaaat cttgaaaaaa atgaagaaaa ccgcagaaga tttcttgggc gaaccggtaa
     2221 ccgaagcggt tattactgtg cctgcatact ttaacgatgc acaacgtcag gcaactaaag
     2281 atgccggtcg tattgcaggt ttagatgtaa aacgtatcat caacgaacca acagcggcag
     2341 cgcttgctta tggtttagat tctaagaaag agaaccaaac gattgctgtt tacgacttag
     2401 gtggtggtac attcgatatt tcgattatcg aaattgataa ctttgacggc gagcaaactt
     2461 ttgaagtgcg tgcaaccaac ggcgatactc acctaggtgg tgaagacttc gataaccgtg
     2521 taatcaacta cttagtggaa gaattccaaa aagaacaagg cgttgattta cgcaacgacc
     2581 caatggcaat gcaacgtgtg aaagaagcag cggaaaaagc gaaaatcgaa ctttcttctg
     2641 cacaagaaac tgaagtgaac cttccataca tcacggcaga tgcaaccggc ccgaaacact
     2701 taaacattaa agtaacccgt gcgaaattgg aatctttagt tgaagattta gtaaaccgtt
     2761 cgttagagcc gttaaaaacc gctttagctg atgccggttt atcagtaggc gacatcaacg
     2821 atgtgatttt agtcggtggt caaacccgta tgccgttagt acagaaaaaa gtggcagact
     2881 tctttggcaa agaaccgcgt aaagacgtta acccggacga agctgtggca atcggtgcgg
     2941 cggttcaagg cggtgtgtta agtggttcgg taacagacgt attgttatta gacgttactc
     3001 cgctttcact tggtatcgaa acaatgggtg gtgtaatgac taccttaatt gagaaaaaca
     3061 ctacgattcc aaccaagaaa tcacaagtgt tctcaacagc ggaagataac caatctgcgg
     3121 taactatcca cgtgttacaa ggtgagcgta aacgtgcagc ggataataaa tctttaggtc
     3181 aattcaacct tgaaggtatt aaccctgctc cacgcggtat gccacaaatt gaagtaacct
     3241 ttgatattga tgctaacggt attatcaatg tctctgcaaa agataaaaac actggcaaag
     3301 agcaacaaat caaaattcaa gcatcttcag gcttaagcga tgctgaagtt gaacaaatgg
     3361 tgcgtgatgc agaagcgaat gcggaagcag acaaaaaatt tgaagagtta gttcaagctc
     3421 gtaaccaagc agacggtatt gctcacgcaa cccgtaagca aattaccgaa gcaggcgatg
     3481 cgttaaacgc agacgataaa gcgaagatcg aagcggctat ttctgagtta gaaaccgcag
     3541 ctaaaggcga agataaagcc gagatcgaag cgaaaatcga agcgttaatc aaagcttcag
     3601 aaccgttaat gcaagcagca caagcaaaag cacaaggcgg cgagcaacca caacaatctc
     3661 aaaaagatga cggcgtggtc gatgcggaat ttgaagaagt gaaagataat aaataatctt
     3721 gcgtaacttg taggggcgaa atatctttcg ccccttttgt gtagatatat accacctagc
     3781 acgagccgtg ctaggttaca cataattcag cccctttggg gctgtgcaag cggtgctttt
     3841 caaaggaaat tttacaaatg ctaaaactct accctacaac ggaaaatgta cagccaccgt
     3901 tttataaaat atacgatcat aaaagtggcg aaacggtcat tgccacagaa acggaaaaca
     3961 gcaataccgc gattttaatg gacgattttg tttggtttga gcaaattcca actaccgaag
     4021 ctcttttggc agacacttgg tctgtgattg aaaaccgttc caaacaaggt ttgctcaaac
     4081 gagcttacac caaagatttt gaaaaacatt tagcagacgg caaagtagaa atttatattg
     4141 cggtgaatcc gcattgttag gcttttgata gcgcaagcgt ccacgcttgt gtcatcttga
     4201 gccatcttgg ctagatccca tttaattata taaaactctc tccccttgtg ggagagagac
     4261 cgaaaaatat ttcgttcaga aatatttttc agagagaggg ggaattaacc atcctacccc
     4321 tctcccacaa ggggcgaggg caagcggtca aaaacacaga aaaatttaca aacggaacaa
     4381 caatggcaaa gaaagattat tacgaagtcc ttggactgtc taaaggggca agcgagaaag
     4441 acatcaaacg agcatataaa cgtttggcgg caaagcatca cccggataaa aaccaaggca
     4501 gtaaagagtc ggaagagaaa tttaaagaga ttaccgaagc ctatgacgtg ctgaccgaca
     4561 gcgagaaaaa agcgatgtac gaccaatacg gtcacgccgc ctttgaacaa ggcggtgccg
     4621 gtgcaggcgg attcggtggc tttggcggcg gtggtttcgg tggttttgaa gacatcttca
     4681 gcgaaatgtt tggcggtggc tttggtggcg gtggacgtcg ccaacgtgtg gtacgtggcg
     4741 atgatttacg ttacgacatc gagatcaccc ttgaagaagc tgtgaaaggc tgtaaaaaag
     4801 atattcgcat tcaaacctta gctgaatgtg atacttgtca tggtacaggg gcggaagcag
     4861 ggagcaaagt ggaaacctgt tcgcattgtc acggctccgg cagagttcgc cgtcagcaag
     4921 gtttctttgt gactgaggca gtttgtccaa gttgtcacgg tacaggtaaa cgcattgaaa
     4981 aaccgtgccg ttcttgccac ggcgatggac gtgtacagaa agcgaaaaac ctctctgtta
     5041 ccattccggc aggtgtggat accggtaatc aacttcgctt atcgagagag ggagctgcag
     5101 gcgaaaatgg cgcaccggca ggcgatttat atgtggtgat tcacgttaaa gaacacgata
     5161 tttttgagcg tgacggttcg aatttatact gtgaagtgcc gattagcttt acccttgcag
     5221 ctttaggcgg tgaaattgaa gtgccaactt tagacggcaa attaaaactc aaaattccgg
     5281 cagaaactca aaccggtaaa ctattccgtg tacgaggcaa aggggtaaca agccctcgtg
     5341 gtggctacgc aggggattta atctgcaaag tggtggtcga aacgcctgtg aatttaaccg
     5401 aagaacagaa agcactatta cgacaatttg aagagagttt agaaggacaa ggtaaacatc
     5461 gtccgaaaca cgaaggtttc tttgatggtg tgaagaaatt ctttgataac ttaggcaaat
     5521 aaaatcataa aaagtacata tttcttaaat atgtactttt ttattatcta ttctttgttg
     5581 aaatctactt
//
LOCUS       DANLXD010000132         5464 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.133, whole genome shotgun sequence.
ACCESSION   DANLXD010000132 DANLXD010000000
VERSION     DANLXD010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5464
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.133"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            110..4306
                     /locus_tag="PXD18_002316"
     CDS             110..4306
                     /locus_tag="PXD18_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL6302698.1"
                     /translation="MKTKTFTRSYLASFVTIVLSLPAVASVVRNDVDYQYFRDFAENK
                     GPFSVGSMNIDIKDNNGQLVGTMLHNLPMVDFSAMVRGGYSTLIAPQYLVSVAHNTGY
                     KNVQFGAAGYNPDSHHYTYKIVDRNDYEKVQGGLHPDYHTPRLNKLVTEVVPAAVTNA
                     GTSIKPYLNEERFPMFLRAGSGTQALRGKESNKTTGIAGAYEYLTGGTTLQLSKSSPD
                     HWLDYSSNLYQVSYGPLSTYALPGDSGSGSYAYDMNEKRWVLVGVLNFYNGMDNQFNR
                     SAIIRKDFHEKKFAEDIAGTINNTVQNAQFNWTAQGKSSSLSQSNNVQKLNVDLKDSS
                     IANQNTSLPQENHGKTINFNGKDATIVLKQDIDQGAGALNLNANLTIRPETDQTWQGA
                     GIIVGKDKKVNWQVKNPQGDRLSKLGEGTLYVNGRGQNLGDISVGDGIVILNQQADHQ
                     GRKQAFNTVGIVSGRPTVVLGSADQVNPDNIYFGFRGGRLDLNGNSIAFKRIQNSDKH
                     ARIVNHNRDHISTLIIQGQDPLTSNDLIWGKWASNSPADIYEYTNPYQNKRKDYFRLK
                     GNSRVYYPTNATSNDHWEFLSSNREQAIQKILDAKNLRQRYDTFNGFIGEDASNKTNG
                     ILNVVFDTKTEVNTEQDKLKNIYTMSGGFNLNGELTLKGGTLLLSGHPTPHAYDIKNK
                     HDVVRENDWQDSHFTAKNITVNKMAQLYIGRNVNEVNSHFTATDKAKLNLGFINRSTP
                     SCYDSEYTGTTHCEVQAVISDNIFANLATTAIKGNVKLQNHSQLNLGKANLTGSVQAD
                     QTTHITLANHSHWLNNGTSQIGHLTMEKGSILSLNDKFATTEIPVRFNKMIIQGNLKG
                     NGRINYTANLAKGESDHLQVDGIAEGNFVLAVRNSTTEANPKSSLNLLSLKNSNQEGN
                     KASISLENNYVDLGTYRYVLENRNHNYHLFNPLIPNSTSKEMNATSVSSIPKKESVTN
                     VPTLDKKETEQNLTQLQKDFSAHQLENQKAKQSMINAQSELRRLNSQLNVLQKYVNSR
                     RLGYYTQQAVLEQISIIQNKIKQTQTIFNDANATVKLTDQKLEEAKLALGSVNDLVLI
                     KASAPAMQATNQDTSMMNIIQADWISQYANTALSELSAQANSALQISNSLDRQLFKQS
                     DKFNVWSSVEHQKTEHKSDLYRPYKQQTNLTQLGIQMPIDNGLMFGVALSKNHANAEF
                     NEGVNGKSNLLMASLYGKWQSQQGTFISLDGSYGKAKNQLYLFGENHFTRRISSIGAN
                     IGHQFDLAGVQIQPTIGARYYHFSGQDYTLGGAKISSPNTHFMTYQAGLKASKTFSLD
                     DWKVEPSITTHYVDASNKRLAVNVNNNNINQRFGRYLKTEAGIRFEHNQWQFDLHAGF
                     INGNEIKKQHFAGVKLGYSW"
     gene            complement(4361..5455)
                     /gene="mobA"
                     /locus_tag="PXD18_002317"
     CDS             complement(4361..5455)
                     /gene="mobA"
                     /locus_tag="PXD18_002317"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HDL6302699.1"
                     /translation="MSKTIEERISAVILAGGLARRMNGVEKGLQLFEGKPLISHILAR
                     LSPQVSDIWLNVNRSIEQYQQLYPAFSYYQDSLPDFQGPLSGMLAGFEQIESDYLLFV
                     PCDTPFMPELLLQKLKTALRINNVQIAYAHDGERPHPTFALIHRSVQEDLKAYLGSNQ
                     QQLLAFFQSQKSVAVDFSEQKSAFTNVNTLEDLSRVSQFPVKNLAITGYSGTGKTTLL
                     EKLIPKLTACGIRVGLIKHSHHNVDVDKKGKDSYRLREAGANPTMIVCDERWALMTET
                     KQAVEFSQLIAKFNPQEVDLVFVEGFKHETLPKIQLHRKGIEKPLPELDQWTIATATD
                     YPLERENWLDINNIGGIADFIKNWLENKAS"
BASE COUNT         1862 a         1088 c          986 g         1528 t
ORIGIN      
        1 actacttagt aattttatat aaaataaggg aagacatctt gccaaactat cagttataag
       61 acagaatagc cagaattttt tattacttat aaggataaac ttctcattta tgaagaccaa
      121 aacatttact cgttcttatc ttgcttcttt tgtaacaatc gtattaagtt tacctgctgt
      181 agcatctgtt gtacgtaatg atgtggacta tcaatacttc cgcgattttg ccgaaaataa
      241 aggaccattt tcagttggtt caatgaatat tgatattaaa gacaacaatg gacaacttgt
      301 aggcacgatg cttcataatt taccaatggt tgattttagt gctatggtaa gaggtggata
      361 ttctacttta attgcaccac aatatttagt tagtgttgca cataatactg gatataaaaa
      421 tgttcaattt ggtgctgcag gttataaccc tgattcacat cactatactt ataaaattgt
      481 tgaccgcaat gattatgaaa aggttcaagg agggttgcac ccagactatc atactcctcg
      541 attaaataaa ttagtaacag aagttgtgcc tgccgcagtc accaatgcag gtacatctat
      601 taaaccctac ttaaatgaag aacgcttccc tatgtttctt cgtgctggtt cagggacaca
      661 agcgctaaga ggaaaagaaa gtaataaaac aactggaatc gctggtgctt atgaatatct
      721 tactggcggt accacattac aattatctaa aagctcccct gatcactggt tagattattc
      781 aagtaacctt tatcaagtaa gctatggacc actttcaacc tatgcactac ctggtgatag
      841 tggttcaggt tcttacgcct atgatatgaa cgaaaaacga tgggtattag ttggtgtgct
      901 caatttctat aatggtatgg ataatcaatt caaccgctct gcgattatcc gtaaagattt
      961 ccacgagaaa aaatttgccg aagatattgc aggaacaatc aataataccg tacaaaatgc
     1021 acaattcaat tggactgctc aaggtaaatc cagctctctt agtcaatcaa ataatgtgca
     1081 aaaactcaac gttgatctaa aagatagtag cattgcaaac caaaacactt ctctgccaca
     1141 agaaaatcac ggtaaaacca ttaattttaa tggtaaagat gcaactattg tactaaaaca
     1201 ggatattgac caaggtgcag gtgcattaaa tctgaacgct aatctcacta ttcgtcctga
     1261 aacagaccaa acttggcaag gtgcaggtat tatcgtcggt aaagataaaa aagtgaattg
     1321 gcaagtaaaa aatccacaag gcgatcgttt atctaaactc ggggaaggaa cactctatgt
     1381 aaatggacgt ggacagaatc ttggcgatat cagtgtaggt gatggtattg taatacttaa
     1441 ccagcaagcc gatcaccaag gaagaaaaca ggcctttaat acagtaggaa tcgtaagtgg
     1501 tcgccccact gttgtgctag gtagtgcaga tcaagttaat cccgataata tttactttgg
     1561 atttcgcgga ggtcgtttag acctaaacgg taacagcatc gcctttaaac gtattcaaaa
     1621 cagcgataaa catgctcgta ttgtaaacca caatcgcgat cacatttcta ccttaataat
     1681 acaaggccaa gatcctctca ctagtaatga tcttatatgg ggaaaatggg caagtaatag
     1741 cccagcagac atttacgaat ataccaatcc ttatcaaaat aaacgcaaag attacttccg
     1801 tctgaaaggt aattcgagag tatattatcc aacgaatgct acaagtaacg atcactggga
     1861 atttctttcc agtaaccgcg agcaagcaat acagaaaatc ctagatgcca aaaacttaag
     1921 acagcgctat gacacgttta atggttttat aggggaagat gcttccaata aaactaatgg
     1981 gatattaaat gtcgtgtttg atacaaaaac agaagtaaat acagaacaag ataaattaaa
     2041 gaatatctac acaatgtcgg gaggatttaa ccttaatggt gaactcaccc ttaaaggtgg
     2101 tacattgttg ctttctggtc acccaacgcc acacgcttat gatattaaga ataagcatga
     2161 tgttgtgcgt gaaaacgatt ggcaagacag ccattttact gctaaaaata tcacggtaaa
     2221 taaaatggca caactctata tcgggagaaa tgtcaatgaa gtaaatagtc actttactgc
     2281 gactgataaa gccaaactca atttaggatt tattaatcgt tcaacgccaa gttgctatga
     2341 ttctgaatac acaggcacta cacattgtga agtgcaagcg gtcatttccg ataatatttt
     2401 tgcaaatcta gcaacaaccg ccattaaagg taatgttaaa ttacaaaacc atagccaatt
     2461 aaatttaggc aaagcaaacc tcactggttc tgtacaagct gatcaaacaa ctcatatcac
     2521 tttagcaaat cacagtcact ggttaaacaa tggtacgagc cagattgggc atcttacaat
     2581 ggaaaaaggg tcgatcctta gcctaaacga taaatttgct accacggaaa tcccagtccg
     2641 attcaacaag atgatcatcc aaggtaatct aaaaggtaat ggacgaatta actataccgc
     2701 aaatttagcc aagggcgaat ctgatcatct ccaagttgac ggtattgctg aaggaaattt
     2761 tgtccttgcc gttagaaata gcacaactga agcaaatcca aaaagctcat taaacctact
     2821 aagcttaaaa aatagcaacc aagaaggcaa taaagcttct atttctctag aaaataatta
     2881 tgttgatcta ggtacttatc gttatgtatt agaaaatcgt aatcacaatt accatttatt
     2941 taatccatta ataccaaatt caacctctaa agagatgaat gctacatctg tatcctctat
     3001 tccaaaaaag gaatctgtta ctaatgttcc tactttagat aagaaagaaa ctgaacaaaa
     3061 tcttactcaa ctacaaaaag atttttcagc acaccaatta gaaaatcaaa aagcaaaaca
     3121 atctatgata aatgctcaat ctgagctaag acgactcaat tcacaactga atgtattgca
     3181 aaaatatgtg aattctcgtc gcttaggtta ctatactcag caggcagttt tagaacaaat
     3241 tagcattatt caaaataaaa ttaaacaaac acaaacaata tttaatgacg ctaatgcaac
     3301 tgtaaaactc acagatcaaa agctagaaga agccaaatta gctctaggct ctgtaaacga
     3361 tcttgtatta ataaaagcct ctgctccagc aatgcaagca actaatcaag atacgagtat
     3421 gatgaatatt attcaagcag attggataag ccaatacgct aacacagcac tttctgaact
     3481 ctcggcacag gctaattctg ctctgcaaat cagtaatagc ttagatcgcc aactcttcaa
     3541 acaaagcgat aaattcaacg tatggagcag cgtcgaacat cagaaaaccg agcataaatc
     3601 agatttatac cgcccgtata aacaacaaac caacctgacc caactgggca tacaaatgcc
     3661 gatagataac ggtttaatgt ttggagttgc attatctaaa aaccacgcta acgcggaatt
     3721 taacgagggt gtaaacggta aatcgaatct actaatggca agcctatatg gtaagtggca
     3781 atctcaacaa ggcactttta tcagccttga tggcagctac ggtaaagcaa aaaaccaact
     3841 ctacctattt ggtgaaaacc actttacccg ccgaatttcc tctattggtg ctaacattgg
     3901 acatcaattt gacctcgcag gagttcaaat tcagccaaca ataggagcaa gatactacca
     3961 tttcagcggc caagactata cactaggagg agcgaaaatc agctcaccaa atacccactt
     4021 tatgacatat caagcgggtc taaaagctag taaaaccttt tcattggatg actggaaagt
     4081 tgaaccaagc attacaaccc actatgtgga tgcaagtaac aaacgcttag cagtaaacgt
     4141 caataataac aatatcaacc aacgtttcgg tcgctatctg aaaaccgaag ctggtatccg
     4201 atttgaacat aaccaatggc aattcgactt acacgctggt ttcattaacg gcaacgaaat
     4261 caaaaaacaa cattttgctg gtgttaagct aggatatagc tggtaagaaa aagcccctag
     4321 aactatttct aggggctttt tctactctta aaaagagtat ctaacttgcc ttattttcta
     4381 accaattctt aataaaatct gctattcccc caatattatt aatatccaac caattttctc
     4441 tctcaagcgg gtaatccgtt gcggtggcaa tcgtccattg gtctagctct ggcaatggtt
     4501 tttcaatccc tttgcggtgg agctgaattt ttggcaaggt ttcgtgttta aagccttcta
     4561 cgaaaacgag atcaacctct tgcgggttga attttgcaat taattgagaa aattcgaccg
     4621 cttgtttggt ttctgtcatt aatgcccaac gttcatcgca cacaatcatt gtcgggtttg
     4681 ctcctgcttc acgtaggcgg tagctgtctt tgcctttttt atctacatca acgttatggt
     4741 gggaatgttt aatcagccca acccgaatac cgcaagcggt caattttggg attaattttt
     4801 ccaataaggt ggttttacct gtgccgctgt agcctgtaat tgcaaggttt tttacaggga
     4861 attggcttac tcggcttaaa tcttccaatg tattcacgtt ggtgaatgcc gatttttgtt
     4921 cggaaaaatc aactgccacg cttttttgtg attggaagaa cgcaagcaat tgctgttggt
     4981 ttgagcctaa ataggctttc aaatcttctt gtaccgaacg atgaatcaac gcaaaagtgg
     5041 gatgtggacg ctcaccatca tgggcatatg caatttgtac gttatttatc cgcaaagcag
     5101 tttttaattt ttgcaataac agctcaggca taaagggcgt atcgcaaggc acaaaaagca
     5161 aatagtcact ttcaatttgc tcaaatcctg ccagcattcc actgagtgga ccttgaaaat
     5221 caggcaagct atcttgatag taagaaaaag caggataaag ctgctgatat tgctcaatag
     5281 aacgattgac attaagccaa atgtcactaa cttgtggtga aagtcgggct aaaatgtgtg
     5341 aaataagcgg ttttccttca aaaagttgta accctttttc taccccattc attcgacgag
     5401 ctaaaccgcc cgctaaaatc acggctgaaa tgcgttcttc tattgtttta ctcacagctt
     5461 tatc
//
LOCUS       DANLXD010000133         5455 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.134, whole genome shotgun sequence.
ACCESSION   DANLXD010000133 DANLXD010000000
VERSION     DANLXD010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5455
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.134"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            109..2676
                     /gene="clpB"
                     /locus_tag="PXD18_002318"
     CDS             109..2676
                     /gene="clpB"
                     /locus_tag="PXD18_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HDL6302700.1"
                     /translation="MNFEKMTTKLQEALAESQSLAVGKDNPYIEPAHLLYALLKQEGG
                     SIASLFTTLNVDVPTLIRELQQILDRLPKVQGGNTQVSQQLVRLLNQSDKLAQQFGDS
                     FISSELFVLAALDDNGDLGKLFKQFGLNKEKLTQAISQIRGGDTVNNQNAEDTRQALK
                     KYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA
                     QRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNDLAKEEGQVILFID
                     EIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKV
                     LVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLI
                     DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEEMAAKE
                     REYSELEEIWKAEKSALLGTQHIKSELENARIAMDQARRENDFEKMSELQYGVIPNLE
                     KQLQAVENGEKNADAQLLRTKVTEEEIAEVLSKATGIPVAKMMEGEKEKLLRMEEVLH
                     ARVIGQNEAVDAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELSKTLANFLFDD
                     PDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRHPYSVVLLDEVEKAH
                     PDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIRENAYKGYDVVKEMVM
                     EVVGQHFRPEFINRIDETVMFHSLGQEHIRSIAKIQLQRLIQRLAERGYEVTVTDAAL
                     DHIGKAGFDPLFGARPLKRAIQQELENPLAQQILSGKLLPNKAVTVDYQNGQIVATQ"
     gene            2890..4032
                     /locus_tag="PXD18_002319"
     CDS             2890..4032
                     /locus_tag="PXD18_002319"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HDL6302701.1"
                     /translation="MSQLFPEATIRTQAPYRNDIVGSFLRTDALKKAREDFNQQKITR
                     DELREVTRQEVKKLVELQKQHGVKAVSDGEFSRTWWHLDFLAELDGMDWQETEVFNVN
                     FTGHKPKGQTVKIVGDIDFSESHPFVDAYRLLKEAAGDYPTKFTIPAPTMLHIICCVR
                     AEDYQPLPQYQDEQKLYDDIANAYIKAMHKFYDMGLRNLQLDDTSWGQFCAEDKRKEF
                     AARGFNLTDLAEKYVALLNRIVDAKPADMSITMHICRGNFRSSWFSEGGYGPVAEVLF
                     GKCRVDGFFLEYDTERAGTFEPLRHIKDQQVVLGLITSKFGDLEDKNVIIERIKEAAQ
                     IVPINQLCLSPQCGFASTEEGNILTEAAQWAKLNLIKEIAEEVWGS"
     gene            complement(4089..5432)
                     /locus_tag="PXD18_002320"
     CDS             complement(4089..5432)
                     /locus_tag="PXD18_002320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HDL6302702.1"
                     /translation="MIFVADAILFIILLNTLPFTPEANKGLALLIFIAVLWLTEALHV
                     TVTALLIPILAVALGLVKSKEALVAFADPTIFLFFGGFALATALHIQQLDRMIANKIM
                     ALAKGKLSIAVIYLFAVTAFLSMWMSNTATAAMMLPLAMGILSKLDQKQNHNTYLFVL
                     LGIAYSASIGGMGTLVGSPPNAIVASQLNLTFADWLKYGLPIMLILFPLMIATLYIVF
                     KPNFSVSFDRSFEKIELNRSRIITLAIFVFIALGWIFGDKINPIISAFLGINGKIASF
                     DTILALIAAALICITRVANWQQIQENTEWGVLFLFGGGLTLSAVLGQTGASKIMADGV
                     VSLIEGGHFYLIGLIVAAFIIFLTEVTSNTASAALLVPIFISIAQALNMPPVGLALII
                     GLGASCAFMLPVATPPNAIVFGTGQIKQSEMIKVGFWLNIISIFVIATVGYLFWL"
BASE COUNT         1778 a         1112 c         1170 g         1395 t
ORIGIN      
        1 ctttttcaca tttttacttg aaaattgttt accaagctcc atttagtgtt tcaacaagag
       61 atgtaaataa aaatttacac tttctaaact cattgtaagg agaaagaaat gaattttgaa
      121 aaaatgacca caaaactgca agaagccttg gctgaatcac agtcgcttgc ggtaggaaaa
      181 gataatccgt acatcgaacc ggcacatttg ctctatgcgt tgttaaaaca agaaggtggc
      241 tcgattgctt ctttgtttac cacattaaat gttgatgtac cgactttaat tcgtgaatta
      301 caacaaattt tagaccgctt gccgaaagtt caaggcggta acacccaagt ttcacaacag
      361 ttggtcagac tgttaaatca atcagacaaa ctggcacaac aattcggcga cagctttatt
      421 tcatcagaac tatttgttct agctgcactt gatgacaatg gcgatttggg gaaactattt
      481 aaacaatttg gcttaaacaa ggaaaaacta acacaagcca tcagccaaat tcgaggagga
      541 gacacagtga ataatcaaaa tgcggaagat acccgccaag cactcaaaaa atatacgatt
      601 gatttaaccg aaagagccaa agccggtaaa ttagacccgg ttatcgggcg tgatgaagaa
      661 attcgccgtg cggtgcaagt cttacaacgc cgtaccaaaa acaaccctgt gttaattggt
      721 gaaccgggtg tggggaaaac ggcgattgta gaaggcttgg cacagcgtat tgtaaacggc
      781 gaagtgccgg aaggcttgaa aaataagcgt gtactttcgc tggatatggg agcattaatt
      841 gccggtgcga aatatcgtgg tgaatttgaa gagcgtttaa aagcggtttt aaacgacctg
      901 gcgaaagaag aagggcaagt tatcctcttt attgatgaaa ttcacacgat ggttggagca
      961 ggcaaaacag acggagcaat ggacgccggc aacttattaa aaccaagcct tgcccgtggt
     1021 gaattgcact gtgtgggggc tacaaccctt gatgaatatc gccaatacat tgaaaaagac
     1081 gcagcccttg aacgccgttt ccaaaaagta ttggtggacg aaccaacggt tgaagatacg
     1141 attgcgattt tacgtggttt gaaagagcgt tatgaaatcc atcatcacgt tcaaattaca
     1201 gaccctgcca tcgtggcggc ggcaacgctt tcgcaccgtt atgtgtctga ccgtcaattg
     1261 ccggataaag cgattgactt gattgatgaa gccgcttcaa gcctgcgtat ggagattgat
     1321 tctaaacctg agccgttgga taaattagaa cgccgcatta tccaactcaa attggaacgc
     1381 caagcgttac aaaaagagga agatgaagcg agccgtcagc gtttagccaa attagacgaa
     1441 gaaatggcag cgaaagagcg tgaatattcc gagctggaag aaatctggaa agcggaaaaa
     1501 tccgccttac ttggtacaca gcatattaaa tcggagttgg aaaatgcccg aattgcgatg
     1561 gatcaggctc gccgtgaaaa cgatttcgag aagatgtcgg aattgcaata tggcgtgatt
     1621 ccaaacttgg aaaaacagtt acaagcggtc gaaaatggcg aaaaaaatgc agatgctcag
     1681 ctcctccgta ctaaagtcac cgaagaggaa attgcggaag tgctttcaaa agcaacgggc
     1741 attcctgttg caaaaatgat ggaaggcgag aaggaaaaac tccttcgtat ggaagaagta
     1801 ttacacgctc gggttatcgg gcaaaatgaa gccgttgatg cggtggcaaa tgcgattcgc
     1861 cgtagccgtg ccggactttc cgatccgaat aaaccgattg gttcattcct attcttagga
     1921 ccgaccggcg tgggtaaaac cgagttaagc aaaaccttag ctaatttctt gtttgacgat
     1981 cctgatgcta tggtgcgaat tgatatgtct gaatttatgg aaaaacacag cgtatcccgc
     2041 ttagtgggcg cacctccggg ctatgtcggc tacgaagaag gcggctattt gaccgaagcg
     2101 gttcgccgcc atccatattc ggtagtgtta cttgatgaag tggaaaaagc tcaccctgat
     2161 gtgtttaaca ttttattgca agtgttagat gacgggcgtt taaccgacgg gcaaggcaga
     2221 acagtcgatt tccgcaatac ggtagtgatt atgacctcaa acttaggctc gcatttaatt
     2281 cgagaaaatg cgtataaagg ctatgatgtg gttaaagaaa tggtgatgga agtcgtcgga
     2341 cagcacttcc gccctgaatt tatcaaccgt attgatgaaa cggtgatgtt ccactcactt
     2401 ggtcaagagc atatccgttc gattgcgaag attcagctac aacgcttaat ccaacgcttg
     2461 gcagaacgag gctatgaggt gacagtaacc gatgcagcat tagatcatat cggcaaggct
     2521 ggtttcgatc cgctgttcgg agcaagacca ctgaaacgtg cgattcaaca agagcttgaa
     2581 aatccgcttg ctcaacagat cttaagcggt aaattattac cgaataaagc cgttacggtg
     2641 gattaccaaa acgggcagat tgttgcaaca caataatgtc tccgatggtg cgagcgtcct
     2701 cgctcgtacc ttacaagcgg tggatttatc gtaaaaattt gcaaaaaatt gctcgaaaat
     2761 aaccgcttgc acagtaaaaa ttttcatatt gcccttcatt aattttcata agctaatgaa
     2821 gggcttttta ttactctttt tgctatcatt aacggcgttt ataaccaata caattacaag
     2881 gagtaattta tgagccaatt atttccggaa gcaacaatcc gcactcaagc cccgtatcgt
     2941 aatgatattg taggcagctt tctacgtacc gatgcgttaa aaaaagccag agaagatttc
     3001 aatcagcaaa aaatcacccg tgacgaattg cgtgaagtca cacgccaaga ggtcaaaaaa
     3061 ttagttgagt tgcaaaagca acacggtgta aaagcagtct ctgacggtga atttagccgg
     3121 acttggtggc atttagattt cttagctgaa cttgatggaa tggattggca agaaaccgaa
     3181 gtctttaacg tgaactttac cggtcataaa cccaaagggc aaacggtaaa aatcgtgggc
     3241 gatattgatt tctccgaaag ccaccctttt gtggacgctt atcgtctttt aaaagaagct
     3301 gccggcgatt acccaaccaa attcacgatt ccggcaccga caatgttaca tattatctgc
     3361 tgtgtgcgtg cggaagatta ccaaccgtta ccacaatatc aagacgaaca aaaactgtac
     3421 gatgatattg ctaatgctta tatcaaagca atgcacaaat tctacgatat ggggctacgt
     3481 aacttacaat tagacgacac cagttgggga caattctgtg ccgaagataa acggaaagag
     3541 tttgcagcca gaggatttaa tttaactgat ttagcggaaa aatatgtcgc attattaaac
     3601 cgtattgttg atgcaaaacc ggcggatatg tcaattacga tgcacatctg ccgtggtaac
     3661 ttccgttctt cttggttctc ggaaggcggt tatggaccgg ttgccgaagt attattcggt
     3721 aaatgccgtg ttgacggctt cttcttagaa tacgataccg aacgtgcagg cactttcgag
     3781 ccactacgcc acattaaaga tcaacaagtg gtactaggct taattacctc taaatttggc
     3841 gatttagaag ataaaaatgt gatcattgag cgtattaaag aagcggctca aattgtgcca
     3901 atcaatcagc tatgcttatc accacaatgc ggctttgcct ccaccgaaga aggcaatatt
     3961 ttaaccgaag ccgcacaatg ggcgaaacta aacttaatta aagaaattgc ggaagaagtt
     4021 tggggtagct aatcctctat aatacaaata gccgagtaaa tactcggcta ttttagtttg
     4081 ttttaacatt acaaccagaa gagataccca acagtcgcaa tcacaaagat agagataata
     4141 tttagccaga aaccaacttt aatcatctca ctttgtttaa tttgccctgt accaaataca
     4201 atcgcattcg gtggggtggc aaccggcaac ataaaggcgc aagatgctcc tagaccaata
     4261 attaaggcta atccgaccgg tggcatattt aatgcttgtg ctatagagat gaaaatcggc
     4321 actaacaaag ccgcactggc tgtgttagag gtaacctcag ttaggaaaat aataaatgct
     4381 gccacaatta aaccaattag gtaaaaatgc cccccttcaa ttagtgagac gaccccatca
     4441 gccataattt tgctcgcacc agtttgtcct aatacagcac ttaacgtcaa accaccacca
     4501 aataggaata atacccccca ctcggtgttt tcttgaatct gttgccaatt tgcgacacga
     4561 gtaatgcaaa taagtgctgc ggcaatcaat gcaagaatgg tgtcaaagct cgcaattttg
     4621 ccattaattc ccagaaatgc agaaataata gggttaattt tatcaccaaa aatccaacca
     4681 agcgcaataa agacgaaaat agccaaggtg ataatacgag aacgatttaa ttcaattttc
     4741 tcaaatgatc gatcaaaact aactgaaaaa tttggtttaa atacgatata tagtgttgca
     4801 atcattaatg ggaataaaat tagcataatt ggcaaaccat attttaacca atcagcaaaa
     4861 gtcagattca attgagaagc aacaatcgca ttcggtgggc ttcccactaa agtacccatt
     4921 ccaccaatac tggcactata agcaattcct aataacacga aaagataagt attatggttt
     4981 tgtttctgat caagtttact taaaatcccc attgccaaag gtaacatcat tgcagctgta
     5041 gctgtattac tcatccacat tgacaaaaac gctgttaccg caaataaata aataactgca
     5101 atcgataatt tacctttagc taatgccata attttattgg caatcatacg atctagctgc
     5161 tgaatgtgta atgctgtcgc taaggcaaag cctccaaaaa ataagaaaat cgttggatca
     5221 gcaaaagcaa caagagcttc ttttgattta accagcccca gtgctacagc caaaatcgga
     5281 attaataatg ccgtaaccgt aacgtgtaat gcttctgtta gccataagac ggcaatgaaa
     5341 attaacaatg ccaacccctt attggcttca ggggtaaaag gcaaggtatt taacaaaata
     5401 ataaataaaa tagcatctgc aacaaaaatc aagctattgc gtgtattttt actcg
//
LOCUS       DANLXD010000134         5410 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.135, whole genome shotgun sequence.
ACCESSION   DANLXD010000134 DANLXD010000000
VERSION     DANLXD010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5410
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.135"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(336..929)
                     /locus_tag="PXD18_002321"
     CDS             complement(336..929)
                     /locus_tag="PXD18_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302703.1"
                     /translation="MHNNLAIFYCGTNGAGKSTLRSFNQDKVEIVIDSDNIAMQINPL
                     NPRLADIEAGRKAIELFQFAVKNQVAFSMESTLSGKSILKRMENAKAGYFKTRLNYIG
                     VDSYKINIARVKARVKAGGHFIDEETIRKRYHISRENLIEAIFINDETLIYDNSETKP
                     NLILQIADKKVIKISDKIPNWCNQLCDELVELGFKTT"
     gene            complement(919..1089)
                     /locus_tag="PXD18_002322"
     CDS             complement(919..1089)
                     /locus_tag="PXD18_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302704.1"
                     /translation="MTSREELLKKQRELDILFTAWFEEKKKHEVLTYRRENGDLIQHY
                     PDGTEKVIEYAQ"
     gene            complement(1091..1833)
                     /locus_tag="PXD18_002323"
                     /pseudo
     CDS             complement(1091..1833)
                     /locus_tag="PXD18_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250915.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
     gene            complement(1830..2273)
                     /locus_tag="PXD18_002324"
     CDS             complement(1830..2273)
                     /locus_tag="PXD18_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL6302705.1"
                     /translation="MLKNLSWRAKRFDELSTQELFEIYHARTAVFVVEQNCPYQEVDN
                     KDLQAVHFFTKNAKNLTAYCRLIPANDGVHIGRVLVVKENRGSGLARELVQKAMDYCG
                     EHFPAQPIHAQAQSYLQGFYESFGFKAVSEVYLEDGIAHLDMVLE"
     gene            complement(2267..2704)
                     /locus_tag="PXD18_002325"
     CDS             complement(2267..2704)
                     /locus_tag="PXD18_002325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HDL6302706.1"
                     /translation="MKQVQFYLLSQADAAELSAAEMQACELAAQAWRLGKRVLIACET
                     EQQALNIDEALWARDPDSFVPHNLSGEITTYPTPIEISWKGKRNAQRRDLLISLQTQL
                     PEFIGSFTQIIDFVPVEETAKAQARDRYKQYRQLGWQLETIQC"
     gene            2943..3386
                     /gene="lysM"
                     /locus_tag="PXD18_002326"
     CDS             2943..3386
                     /gene="lysM"
                     /locus_tag="PXD18_002326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein LysM"
                     /protein_id="HDL6302707.1"
                     /translation="MGLFDFVGDIGRKLFNKEEDASKAVTEHLAEDNPGVENVNVTVE
                     NGVAKISGIASTAAAVEKAVLMAGNVAGITEVNIDEVTLPDDVQLASDDELYVIQKGD
                     TLWEIATKAYGNGAKYKAIVEANKEVIKDENKIFPGQKIRIPKGL"
     gene            complement(3440..4291)
                     /locus_tag="PXD18_002327"
     CDS             complement(3440..4291)
                     /locus_tag="PXD18_002327"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005701564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HDL6302708.1"
                     /translation="MKQYLDLCNRIVSEGKWVANERTGKHCLTVINADLTYDVEKGEF
                     PLVTTRRSYWKAAIAELLGYIRGYSNAADFRQLGTKSWDANANENAQWLANPYRKGED
                     DMGLVYGAVGRNFPKPDGGSVDLLRQIVDDLKKGIDNRGEIYTFYHPGAFHMGCLRPC
                     LHSHHFSLLDGTLYLNSTQRSADVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIV
                     NAHIYEDQLELMRDVQLKREPLNAPKLIINPDIKSLEDLETWVSLDDFKVEGYEYHPA
                     IQYPFSV"
     gene            4384..4935
                     /locus_tag="PXD18_002328"
     CDS             4384..4935
                     /locus_tag="PXD18_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302709.1"
                     /translation="MKGIMKSILVFSTAVFLAACSSNKSGWTRLNDNDVDQKSYAIAY
                     GATAQTYADRVNESYDINSFMNGVNDWYTKKVTLPIEQIRAITINRMLDHNVYAYYSG
                     VIYAADLQANFNHLDPNCWGLVQPASMTQGIHDAMLDLQKNKVRGDEYIKNGVEQILH
                     LCVKTIAEDENESQSKGKTKKHK"
     gene            5144..5238
                     /locus_tag="PXD18_002329"
     tRNA            5144..5238
                     /locus_tag="PXD18_002329"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5179..5181,aa:Ser,seq:gct)
     gene            5252..5328
                     /locus_tag="PXD18_002330"
     tRNA            5252..5328
                     /locus_tag="PXD18_002330"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5286..5288,aa:Arg,seq:acg)
BASE COUNT         1581 a         1036 c         1061 g         1732 t
ORIGIN      
        1 gaattttgtt attttttatg aactgtttta agccattctc ttttttatga gtaccaataa
       61 cttttttaga ctttttccta ttctgtttca tctttgtgtt tttgttccaa tatccccgat
      121 ggtgatcgtc ttcgacgaga gcttatttat ttaagaacct atcagagata ggcataagcg
      181 gtctgtttcg agaagttttt tgcaaagttt ttctttaatc cgacagcttg tcacccacac
      241 acaagccgtg tggggttacg catagctgag ccactttgtg gctctaagtt acagctccaa
      301 aggagctggg attgtcgagc ctagcacggc tcgtgctagg tggttttaaa ccctaattcc
      361 actaattcat cacaaagctg attacaccaa ttcggtattt tgtctgaaat ttttatcact
      421 ttcttatcag caatctgcaa aatcaaattc ggcttggttt ctgaattatc ataaatcagt
      481 gtttcatcat tgataaaaat cgcttcaatt aaattttcac ggctaatgtg atagcgtttt
      541 ctaatggttt cttcatcaat aaaatgtccg ccggctttca ctcttgcttt tacccgtgcg
      601 atgttaattt tatagctatc gacaccaata taatttaatc gagttttgaa atatcctgct
      661 ttggcatttt ccattcgttt tagaatagat ttacccgaga gggttgattc cattgaaaat
      721 gcaacctgat tttttactgc aaactgaaat agttcgattg cttttctgcc cgcctcaata
      781 tcggccaatc ttggattgag tgggttaatc tgcatcgcaa tattatcgga atcaatcaca
      841 atctcgactt tatcttgatt gaaagaacgt aaagtagatt tgccggctcc gtttgtgcca
      901 cagtaaaaaa ttgctaggtt attgtgcata ttcaatcact ttttccgtac cgtccggata
      961 atgctgaatt aaatccccat tttctcggcg atacgtcagc acttcgtgct ttttcttttc
     1021 ttcaaaccat gctgtaaaga gaatatccag ttcacgttgt tttttcagta attcttcacg
     1081 acttgtcatt ttatgtcctc tgtttcagaa tcgccaaata cctttccaac tcagctaatt
     1141 catactgact aatcaattca accaaactac taatatcttg ttgattttta tggaaatcat
     1201 caaaacattg gtaatattgg gctcgattgg taaatttaat atcaatcggt aaatagccct
     1261 gttttaataa ttcaaaatta atcagtaatc gccctgtgag cccgtttcca tcaataaaag
     1321 ggtgaatgct ttcaaaggct aaatgcagcc aactgattgc ctctatggga tgaagtgcgg
     1381 tcagtttttg ttgatatttt tcaatcaata attgcatttc ttcggcaatt aaataagggg
     1441 gggggcattt tctgccccta aaattcgtac tggaattttg cgataaaccc ctcggctttc
     1501 cgcattgccc attaatacca gagaatgaat atctttaatc gctcgttcgc ttaatggttc
     1561 tttattggcg actaattcat aaatatagtt gaatgcatcc ttaaaaccga taatatctaa
     1621 atgctcccga atcggttttt cggcaatggt cattccctct tttaaaatga gcaccgtttc
     1681 acgcaaagta atggtattgc cttcaattgc attggaatta tagctgcttt caataataaa
     1741 ctcttcccgc agtcgttgaa cttcgctttc agataatgga cggcgttgtg aaagtgctgt
     1801 ttttaattgt tcgattttag ctaatttatt cattctaaca ccatatccaa atgcgcaatc
     1861 ccatcttcca aatacacttc tgaaaccgct ttaaacccaa aactttcata aaacccttgc
     1921 aggtaacttt gggcttgggc gtgaatgggt tgagcaggaa aatgttcgcc acaataatcc
     1981 atcgcttttt gtaccaattc ccttgctaag cctgagccac gattttcttt caccaccaac
     2041 actctaccta tatgcacacc atcattggct ggaattaaac ggcagtaagc ggtcagattt
     2101 tttgcatttt ttgtaaagaa atgcaccgct tgcaggtctt tattatcgac ttcttggtaa
     2161 gggcagtttt gctcaaccac aaacaccgct gtacgtgcgt ggtaaatctc aaacaactct
     2221 tgggtggaga gttcatcaaa gcgttttgcg cgccaagaga ggttttttag cattgtatcg
     2281 tttccagttg ccaaccaagt tggcggtatt gtttatagcg gtcacgagcc tgtgctttgg
     2341 cggtttcttc caccggcacg aaatcaataa tctgggtaaa actgccgata aattcgggga
     2401 gttgggtttg gagtgaaatc aacaaatccc gacgttgagc attgcgttta cctttccacg
     2461 aaatttcgat aggcgttggg taagtggtga tttctcccga taaattgtgc ggcacgaacg
     2521 aatccggatc tcttgcccaa agtgcttcgt caatatttaa cgcttgttgc tcggtttcgc
     2581 atgcaatcag tacccgttta cctaatcgcc acgcttgagc cgcaagttcg caggcttgca
     2641 tttcagcagc ggaaagctcg gctgcatcgg cttggcttaa tagataaaat tgtacttgtt
     2701 tcacagaatg ttcccagaaa ttcaatcaga tatttaaact taatattcta gctgaaaatg
     2761 agtaaaatat aaaatctaag cgtttgtttt tgcaaaaaat tgagaaaaaa tgaccacttg
     2821 tgttgcgttg ccttgaggaa ctaattagct tttagacgtt ctaagagaac aatgcactat
     2881 ttcaatagtt ggaaattgtg tagaataccc acttcattta gctattttat aaggaactta
     2941 ctatgggctt atttgatttt gttggcgaca ttggtcgtaa attatttaat aaagaagaag
     3001 atgcttcaaa agcggttaca gagcatttgg cggaagacaa tccgggcgtt gaaaatgtaa
     3061 acgtaacggt tgaaaacggg gtagcgaaaa tttcaggcat tgcttcaacc gcagcagctg
     3121 ttgagaaagc ggtattgatg gcgggtaatg tggctggtat cactgaggta aatattgatg
     3181 aagtgacctt gcctgatgac gtgcaacttg caagtgatga tgagctttat gttatccaaa
     3241 aaggggatac gttgtgggaa atcgccacaa aagcttatgg taacggtgca aaatataaag
     3301 cgattgtaga agcaaataaa gaagttatta aagacgaaaa taaaatcttc ccagggcaaa
     3361 aaattcgtat cccgaaaggt ttataatcaa attgaaagag ctaagctggt cgaaagttta
     3421 gctctttttg taggtggtgt tagactgaaa atggatattg aatggcaggg tggtattcat
     3481 aaccttcaac tttgaaatca tctaagctca cccaagtttc taaatcttct aaggatttta
     3541 tatcaggatt aatgattaat ttaggtgcat tgagtggttc tcgcttaagt tgaacatcac
     3601 gcattaattc tagttgatct tcataaatat gcgcattgac aattttatgg aacgcttgtc
     3661 ctgccttatg ccctgtaatt tgagccatta aagctaaaaa ggtatagcat tgaatcatat
     3721 tccaatttaa cccaagcggt acatctgccg aacgctgagt actattcagg taaagcgtgc
     3781 catcaagtag agaaaaatga tggctgtgta aacaaggacg taagcagccc atatggaaag
     3841 cgccggggtg gtagaaggta taaatttcac cacggttatc aattcctttt ttcaaatcgt
     3901 ccacaatttg tcgcaataaa tcgactgagc caccgtctgg tttcgggaaa ttacgcccta
     3961 ctgcgccgta aaccaagccc atatcatctt ccccttttcg atagggatta gcaagccatt
     4021 gtgcattttc atttgcatta gcgtcccacg attttgtgcc taattgacgg aaatcagcag
     4081 cattactata gcctcgaata tagcctaaaa gttcggcaat cgcagctttc caataactac
     4141 ggcgagtggt aactaaagga aattctcctt tttctacgtc ataagttaag tcagcattaa
     4201 tgactgtgag gcagtgtttg cctgtacgtt catttgcaac ccatttgcct tcgctaacga
     4261 tgcggttaca taagtctaaa tactgtttca ttatttacct cataaaaaat tttaggtaat
     4321 tttgccattt attcggtaaa atagctaaaa ctttatgaca caacacaata aggagttatg
     4381 gatatgaaag gtataatgaa atccattctg gttttttcca ccgctgtttt tttagcagct
     4441 tgttcatcga ataaaagcgg ttggacacgt ttaaatgata atgatgttga tcagaaatct
     4501 tatgctattg cttatggtgc aacggctcag acttatgcgg atagagtaaa tgaaagctat
     4561 gatatcaatt cctttatgaa tggggtaaat gattggtaca ctaaaaaggt tacattgcca
     4621 attgagcaaa ttagagcaat aacgattaat cgaatgttag accataatgt gtatgcttat
     4681 tatagtggtg tgatttatgc cgcagatttg caggcaaatt tcaatcattt agatcctaat
     4741 tgttgggggc ttgttcaacc agcgagtatg acccagggca ttcacgatgc gatgttagat
     4801 ttacagaaga acaaagttcg tggagatgag tatatcaaaa atggggttga gcaaatattg
     4861 cacctttgtg taaaaacgat tgctgaagat gaaaatgaat cgcaatctaa aggtaaaacc
     4921 aaaaagcata aataagttaa gctatgacaa gcggtaaaat ttttaaaaaa ttttaccgct
     4981 tttttataac cgtatgaaat gtttaatatt tattctatga aacttaaaaa aacagcgttt
     5041 tgtttattca ataggcaaac actcgggatt tttcaatttt caggaaaaag aatttgacat
     5101 ctttttaaat tctagtaata tggcgcccac agacacagtg agtggtgaga tggccgagca
     5161 ggctgaaggc gctcccctgc taagggagta tagggttaaa aagctctatc gagggttcga
     5221 atccctctct caccgccatt tactttatca cgcacccgta gctcagctgg atagagtact
     5281 cggctacgaa ccgagcggtc agaggttcga atcctctcgg gtgcgccatt ttaattttta
     5341 ctctattcaa attaaaatgg ttgctgataa aattaaataa acttacaatt caaatatacg
     5401 cacccgtagc
//
LOCUS       DANLXD010000135         5382 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.136, whole genome shotgun sequence.
ACCESSION   DANLXD010000135 DANLXD010000000
VERSION     DANLXD010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5382)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5382)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5382
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.136"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(214..531)
                     /locus_tag="PXD18_002331"
     CDS             complement(214..531)
                     /locus_tag="PXD18_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6302710.1"
                     /translation="MLSRKEVLMTRRASMNLQQIIRNVVEYTYSYESGDKLSAEIHNT
                     LDNLSYFPRIGVIGSVENTRECFCRGYRIIYRETENQVQILAIIHCRQQYPTDYYRSA
                     FKA"
     gene            complement(524..682)
                     /locus_tag="PXD18_002332"
     CDS             complement(524..682)
                     /locus_tag="PXD18_002332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302711.1"
                     /translation="MTEEYQNFLIEQVKQGLDDIENGRVISLEESRQLCQKTIYETLQ
                     ELQGAVYA"
     gene            complement(736..891)
                     /locus_tag="PXD18_002333"
     CDS             complement(736..891)
                     /locus_tag="PXD18_002333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302712.1"
                     /translation="MLFKEKGYDEFLTQKIAKGRAELESGKGIPLEQATLLVQSTIEE
                     TAQELDD"
     gene            complement(1029..1286)
                     /locus_tag="PXD18_002334"
     CDS             complement(1029..1286)
                     /locus_tag="PXD18_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302713.1"
                     /translation="MICHADPEYVKYNYAGLWEKGSDGTFFYNYQQFMPEVEAKESLR
                     EQEPELDDGYNEEEYSEEEYSDENDASDENDNYDETYDDNF"
     gene            1300..1476
                     /locus_tag="PXD18_002335"
     CDS             1300..1476
                     /locus_tag="PXD18_002335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302714.1"
                     /translation="MAYVRIYQGEAYGWCAEKGEANTECPEALLVSLTGDIFEAVGGD
                     KLKGAKKWQPYKKE"
     gene            1480..1626
                     /locus_tag="PXD18_002336"
     CDS             1480..1626
                     /locus_tag="PXD18_002336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302715.1"
                     /translation="MDTTQKRVALFIIGLSVVMWLRKHNCCTVIFVLLLAALAFSYTM
                     EHLY"
     gene            1642..1848
                     /locus_tag="PXD18_002337"
     CDS             1642..1848
                     /locus_tag="PXD18_002337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302716.1"
                     /translation="MVKNVVHEEILHNRAELQQAVEKEEFCAKCDNSVVFHLRDNYHE
                     FTLGLDTILQCLHFAEEKGAIRIP"
     gene            1845..2621
                     /locus_tag="PXD18_002338"
     CDS             1845..2621
                     /locus_tag="PXD18_002338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302717.1"
                     /translation="MNIEYSLNHCQGDGVAFYGRLGTDDLIQLFNHLNPQKRKQKMFA
                     NLLTHIESWETHDDIGFEIIRNRFGYRYSHWNTMELYAKTADQLVFFNDSDARRNWYF
                     PTSKVYKYKGLWDEFIQDLEQYIKGTSREMESVGYQIIEASPYQTETVFKFNTENYLV
                     ELKRKPSEFYSELVDWAFGDMCDFEATIEQICQGQLCYADFEATVTDKKSEIQLGLAR
                     LSGISYSPNDRSFSGYRQELIGEAIASARHNAARFAYLHA"
     gene            2736..3148
                     /locus_tag="PXD18_002339"
                     /pseudo
     CDS             2736..3148
                     /locus_tag="PXD18_002339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484619.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
     gene            3162..3317
                     /locus_tag="PXD18_002340"
     CDS             3162..3317
                     /locus_tag="PXD18_002340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302718.1"
                     /translation="METRIVKVIYDDGDYFFTRINADEQAIRNYYAIGSSIGFDDIRK
                     IIAVEIL"
     gene            3397..4371
                     /locus_tag="PXD18_002341"
     CDS             3397..4371
                     /locus_tag="PXD18_002341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HDL6302719.1"
                     /translation="MNTQPKFDLYQHITDRIVVALEQGTAPWLKPWSHPECNMALPRN
                     AVSNRLYSGINTLLLWIATAEHGYKQCKWITAKKANELGGYIRKGEKATVVMNYRPDE
                     REKLDEEGNIVYDEEGNPEMERHFFINKHNLFNLDQCENLPVELYDPVSEPKQPKSEP
                     NQYDIFAEIRQIIKGMDLQVEMKPSNRAFYQPGEDKVVMPEMKQFANAQAFHSVLLHE
                     MTHATGANNRLNREGITSGKAKFGNKVYAFEELIAEMGGAFLCAYLGFDTVPQNAAYI
                     ESWIRVLKEDKRAIVRASGKAREACQYMLDALNVAQLADKYDVFEEAA"
     gene            4458..4655
                     /locus_tag="PXD18_002342"
     CDS             4458..4655
                     /locus_tag="PXD18_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302720.1"
                     /translation="MTKSTEIPRGHDNWVITGRDNDGKWHKERFLYYSRREAIQQFRR
                     KHNCVGKHSVIESITPQFGWY"
     gene            4732..4974
                     /locus_tag="PXD18_002343"
     CDS             4732..4974
                     /locus_tag="PXD18_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302721.1"
                     /translation="MFNLNLFKRPIELSTLESWSKFCDDVGKVAFIAIPPMIYSNYDL
                     CIKIGNISALLAITYGFLLSGRTIRQFIEKEKSRWD"
     gene            complement(5134..5322)
                     /locus_tag="PXD18_002344"
     CDS             complement(5134..5322)
                     /locus_tag="PXD18_002344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302722.1"
                     /translation="MLERGYVRIYQGKAYGWCAEQEDANTECPTALIVSLSNEIFEAT
                     GGDDISGAEKWEKYNSNF"
BASE COUNT         1604 a          953 c         1110 g         1715 t
ORIGIN      
        1 taaattgttt gaagactggc gttgagcttc atttttagct cgcacttcat taaaaataga
       61 gataaacgtt tgtgcttttt taagtagaga cattgtggtt ctcctgtttt ttgcacctaa
      121 tattattgaa ctatggtagg cttggcgagc attgccttga gttttaattc ggctacggtc
      181 atttttcttt ttatttccat tttatagctc ctgttatgct ttgaatgcag agcgataata
      241 gtcggttggg tattgttgac gacaatggat aatggctaaa atttgcactt gattttctgt
      301 ttctcgatat ataattctat aacctcggca aaagcattct ctagtatttt ctactgaacc
      361 tataacacca attcgtggaa aataagaaag attatccaaa gtgttatgaa tttccgcaga
      421 taatttatca ccactttcat agctataagt atattccaca acattacgaa tgatttgttg
      481 taaattcata cttgctctgc gagtcattaa cacctctttt cgactaagca tacacggctc
      541 cctgtagctc ttgcaaggtt tcatatatgg ttttttgaca cagttgacgg ctttcttcta
      601 atgaaataac acgtccgttt tctatatcat caagtccttg ttttacttgc tctattaaga
      661 agttttggta ttcttctgtc atggataact cctatcatta gttgtatata gatatattag
      721 caatgttaca aattgttaat cgtccagttc ttgagcagtt tcttcaatag ttgattgaac
      781 taacaatgtg gcttgctcaa gaggaatacc ttttccggat tctaattcag ctctgccttt
      841 tgcaattttt tgagtaagga actcatcgta gcctttttct ttaaatagca ttttatgttc
      901 ctttcactta ttacaaggct ttcaggcata gggattatgt tctcctaaat gcgaaatatt
      961 ggaataattt acgcttaaag caatagagtg tcaagagcag ggtttttgga agtgtggttt
     1021 gggaatattt aaaaattatc atcataagtt tcatcgtagt tatcgttttc atcgctggca
     1081 tcattttcat cggaatattc ttcttcgcta tattcctctt cgttatatcc atcatcaagt
     1141 tcaggttctt gttcccttag tgattcttta gcttcaactt caggcataaa ttgctggtaa
     1201 ttgtagaaaa aagtgccatc gctgcctttt tcccaaagtc cggcgtagtt gtattttaca
     1261 tattcaggat cagcgtggca tatcatccct aattgagggg tggcatatgt tcgtatttac
     1321 caaggtgagg cttatggttg gtgtgctgaa aaaggagagg caaatacaga atgccctgag
     1381 gccttattgg tgagtttaac cggcgatatt tttgaagcag tcggcggaga taagctgaaa
     1441 ggtgccaaaa aatggcagcc ttacaagaaa gaatgacaga tggatacgac acaaaaacgt
     1501 gtggctttat tcatcattgg attatctgtt gtgatgtggc taagaaagca taactgctgt
     1561 acagtgatat ttgtattgtt gttggcagcg ttagcattta gctacacgat ggaacattta
     1621 tattagctgg ggaactgaat tatggtaaag aatgtggttc atgaagagat attacataac
     1681 cgtgcagaat tacagcaagc ggttgaaaaa gaagaatttt gtgcaaaatg tgataactca
     1741 gtagtattcc atttacgtga taattatcac gaatttacgc ttgggttaga tactatattg
     1801 cagtgtctgc attttgctga agagaaggga gctatccgga taccttgaat attgagtatt
     1861 cactcaatca ttgccaagga gatggagtcg cattttatgg tcgacttggt acagatgatc
     1921 taatccagct tttcaatcat ctcaatccac agaaacgtaa acagaaaatg tttgctaatt
     1981 tgctaacgca cattgagtct tgggaaaccc acgatgatat tggttttgaa attatacgaa
     2041 atcgctttgg gtatcgttac tcgcattgga atacgatgga gctttatgct aaaactgcag
     2101 atcagttagt gtttttcaat gatagtgatg ctcgaagaaa ctggtatttt ccgacttcaa
     2161 aagtgtataa atacaaaggc ttgtgggatg agtttattca ggatttagaa cagtatatta
     2221 agggtacttc ccgtgaaatg gaatcggtcg gttatcaaat tattgaagcc tcgccgtatc
     2281 aaacggaaac cgttttcaaa tttaatacgg aaaactatct agtagaactg aaacgtaaac
     2341 cttctgagtt ttattcagag cttgttgatt gggcatttgg tgatatgtgt gattttgaag
     2401 caactataga gcagatttgt caagggcaac tctgttatgc tgattttgaa gcaactgtta
     2461 ccgataagaa aagtgaaatt cagttaggtc ttgctcgctt gagtggaata agttactcgc
     2521 cgaatgaccg ttcgtttagt ggttatcgac aagagcttat tggtgaggcg attgcctctg
     2581 ctcgccataa tgcagcacgt tttgcctact tgcacgccta atttgcagat ttgtacttca
     2641 atttgaccgc ttgtagtggt taattttcac cccgtgggga aatattttcc ctattgggca
     2701 agatgtttct ccacttttta atttggagaa atgtgatgaa aaatgaacac aatttagagc
     2761 aacttaaata tatttgggat aaccgcaacc ttgaaaataa agcctatcaa tacctgtttc
     2821 acatttgcat tgagccgatg aaaaaaggag attggaatcg ttatacgatt tggcttaatt
     2881 ttcacggcaa cttaatcaac gtgtcagacg ttgtatatcg agttgtggaa tctcaaaagc
     2941 tcaaggatga catcaaaatg tggtatgaca ataataccat tgtcgtccga taaaagttga
     3001 aacaacaggc ttcatctcat atttactgca ccagttctat caggggatag cctatatttt
     3061 actggaacag ggaatgatta ctgaaactga agcagccgag aaaagttata acttcagagc
     3121 tgcaaattgt tttcaacgtt tgctttaatg gaggtgagat aatggaaact cgcattgtta
     3181 aagttattta cgatgatggt gattatttct ttacccgaat caatgctgat gaacaggcta
     3241 tccgtaatta ctacgccata ggcagttcaa taggttttga tgatataaga aaaattatcg
     3301 ctgttgaaat tttataaacc acccataggg gaaactattt ccccataggg tgatagcgtt
     3361 tccccatttt tctacccgaa ctttggagaa acacttatga acactcaacc taaatttgat
     3421 ttataccaac acatcactga ccgaattgtt gtagcactgg aacaaggtac agccccgtgg
     3481 ttaaaaccgt ggagccatcc ggaatgcaat atggcattac ctcgcaatgc ggtatctaac
     3541 cgcttgtatt ccggtatcaa tacactctta ctctggattg ctactgctga acatggttac
     3601 aaacagtgca agtggattac agcaaaaaaa gccaatgaac tcggcggata tatccgtaaa
     3661 ggggaaaaag ctactgtggt gatgaactac cgtcctgatg agagagagaa actcgatgag
     3721 gaagggaata ttgtgtatga cgaggaagga aatccggaaa tggaacgaca ctttttcatt
     3781 aataagcaca atctgttcaa tctggaccag tgtgaaaatt taccggtgga actgtacgat
     3841 cctgtatcag aaccgaaaca acctaaatct gagccaaacc aatacgatat ttttgctgag
     3901 attcggcaga ttatcaaagg aatggatttg caggtggaaa tgaagcctag caatcgggca
     3961 ttttatcaac caggtgaaga taaggtcgta atgccggaga tgaagcagtt tgcaaatgct
     4021 caagcgtttc atagtgtatt gttacacgaa atgactcacg caacgggggc aaataatcgg
     4081 cttaatcggg aaggtattac ttccggaaag gctaaatttg gaaacaaagt ctatgctttt
     4141 gaggagttga ttgctgaaat gggcggtgca tttttatgtg cctaccttgg ttttgatact
     4201 gtgcctcaaa atgcggcgta tattgaaagt tggattcgag tattgaaaga agataaacgg
     4261 gcgattgtcc gtgcttccgg aaaagctcgt gaagcctgcc aatacatgtt agacgcatta
     4321 aacgtcgcac agttggctga caaatacgat gtatttgaag aagctgctta acaaatttgc
     4381 cgaaaggcat atctcaaggg gagacctatc cctttgggca tagtgtttcc ctatttttta
     4441 ttaaatggag aaaagctatg acaaaatcaa ctgaaatacc tcgtggacat gataactggg
     4501 ttattacagg cagagacaat gatgggaaat ggcataaaga acgttttctt tattattctc
     4561 gccgtgaagc catccaacag tttcgtcgaa aacacaactg cgtaggtaaa catagtgtta
     4621 ttgaatcaat aacacctcaa tttggctggt attaaccggc tttcccgtgg ggagatactc
     4681 tcccttcgga gcattgtgtc tcccttttta ttcacttaac tagaggacac aatgttcaat
     4741 ctaaacttat ttaaacgccc tattgagctt tcaacgcttg aatcttggtc taaattctgt
     4801 gatgatgtcg gtaaagttgc atttattgcg atacctccga tgatttatag taattatgat
     4861 ctatgtatca aaataggaaa cataagtgct ttattggcaa ttacctatgg attcttatta
     4921 tcaggcagga ctatccgtca atttattgag aaggagaaat caagatggga ttaacaatcg
     4981 gcttatggat cattgctttt ataggctttg cactggtttt ttgggcaaat agcttactca
     5041 aagagcaaga tgaacgcctt aaacagctaa aaaaatagct caactttaca ctcaatacgg
     5101 cacatttggt gccgtatttc attcttatcc taattaaaaa ttagaattat atttttccca
     5161 tttttcagcc ccacttatat catcacctcc agttgcctca aaaatttcat tagataagct
     5221 gacaattaag gcggtagggc attccgtgtt tgcatcttct tgctctgcac accagccata
     5281 ggcttttccc tgataaatac gaacataacc acgctctagc ataaaagggt gagaatcctt
     5341 gtgattttga cgaaattttt gagcaataga caaaatttgt tt
//
LOCUS       DANLXD010000136         5293 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.137, whole genome shotgun sequence.
ACCESSION   DANLXD010000136 DANLXD010000000
VERSION     DANLXD010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5293
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.137"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..1122
                     /locus_tag="PXD18_002345"
     CDS             <1..1122
                     /locus_tag="PXD18_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HDL6302723.1"
                     /translation="SSLPTSGPSYSEVLASNEKTADTQLPEVNLIKLDNITVQNLYQT
                     QQAQRFSGFDGSMGMGGYAGTVNVGDVLEISIWEAPPAVLFGGTFSAEGQGNGHLTQL
                     PQQMVNQNGTVTVPFIGNIKVAGKTPEAIQNQIVGALSRKANQPQALVRIANNLSSDV
                     TVIRQGNSIRMPLSANNERILDAVAAVGGTSENIEDVTVRLTRGNKVRSMAFETLIAD
                     PSQNITLRSGDVVALMNTPYSFTGLGAVGNNQQMRFSSKGITLAEAIGKMGGLIDDRS
                     DPRGVFVFRHIPFTQLDYDNQAQWREKGYAEGMDVPTVYQVNLLEPQSMFLLQRFPIQ
                     DKDIVYVSNAPLSEFQKFLRMIFSITTPITGTANTIRAY"
     gene            1194..2297
                     /locus_tag="PXD18_002346"
     CDS             1194..2297
                     /locus_tag="PXD18_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDL6302724.1"
                     /translation="MSKKKKHFLANPLLWLTVIIPTACSGIYYSLFASDIYVSESSFV
                     VRSPNNQSSLTGVGALLQNSGFARSQDDTYSVQEYMRSRTALEQLEAEIPVKRFYSEQ
                     GDLLSKFNGFGFNDTQEAFYRYFKEHLNIDVDSISGIATLRVRAFNAEEGQKINENLL
                     QQGETLINRLNERARQDTVEFAEERVKEAEKDVNNTALALSQYRTKNKIYDLPAQSGV
                     QLSLISTLKSELIRVETQLAQLQSITPDNPQVAALQMRQKSLKKEIDDQSKQLAGGNT
                     SVATQTAEYQRLVLANELAQQQLAAAMTSLQNTRGDADRQQLYLEVIGKPSKPDWALE
                     PYRIYNIIATFFIGFILFGVLSLLVASIREHKN"
     gene            2297..3094
                     /locus_tag="PXD18_002347"
     CDS             2297..3094
                     /locus_tag="PXD18_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_157140410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6302725.1"
                     /translation="MRYGDNTTFKRSRVIQKRVIHALLMRELITRYGRQNLGFLWLFI
                     EPLLLTLVMAIAWKYIKADKFSTLNIIAFMITGYPVAMMWRNASNRALGAISSNLSLL
                     YHRNVKVLDTIFARVLLEVAGASIAQILLMAIFIAIGWIEMPNDIFYMLCAWILMAFF
                     ALGLGLIICALAHYIEPFGKIWGTLSFFLLPLSGTFFFVHNLPPTAQQIVLWFPMIHG
                     TEMFRHGYFGETVVTYENISYIVINDLILLFIGLLFVKSFSKGIEPR"
     gene            3091..3738
                     /locus_tag="PXD18_002348"
     CDS             3091..3738
                     /locus_tag="PXD18_002348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6302726.1"
                     /translation="MISVKNVSKRYRTNSGWRTVLKDINFELKKGEKVGILGRNGAGK
                     STLIRLMSGVEPPSTGTIERQMSISWPLAFSGAFQGSLTGMDNLRFISRIYGADFDYV
                     KSFTEEFSELGEYLYEPVKSYSSGMKARLAFALSLSIEFDCYLIDEVIAVGDARFSAK
                     CKHELFEKRKDRSLILVSHSPASIKEYCDSAMVLEEGIMHTFDSIDNAYNFYNKT"
     gene            complement(3816..4445)
                     /locus_tag="PXD18_002349"
     CDS             complement(3816..4445)
                     /locus_tag="PXD18_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HDL6302727.1"
                     /translation="MDFSKILSQVLDTAKDAATNGLIKGNSKNDQIAKIGGGAVAIGL
                     ISMLFGRNGGSSLAKLGSLAAIGSLAYQAYQKYQAQNSSVSELSQNNFENVDENVASK
                     VILQAMIAAAASDGAITEEEKAAIVSQVGDEAEVIEWIRQEMDTPATVEDIAHQVGND
                     QALATQVYLASRAVCRDLERKEIVFLANLAEALGLSEALVEQLEKDAGF"
     gene            complement(4517..4990)
                     /locus_tag="PXD18_002350"
     CDS             complement(4517..4990)
                     /locus_tag="PXD18_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HDL6302728.1"
                     /translation="MLEKITACPCQTGKRYAECCQPFHLKQTFASTAEQLMRSRYSAY
                     TLVNIPYIVETTVPSQQKLLDQTAMKEWAENTKWVGLSVLNHLPSLSRIHSQVEFKAF
                     FDTDEGIQGHHETSLFVQIDERWFFVDPTVPLPHQKQPCVCGSGKKFKHCCGNYL"
BASE COUNT         1656 a          978 c         1009 g         1650 t
ORIGIN      
        1 tctagcctac caacctcagg cccgagctat agcgaggtgc tagctagtaa tgagaaaaca
       61 gctgacactc agttgcctga agttaatcta attaaattag ataatataac agtacaaaac
      121 ttataccaaa ctcagcaagc acaacgtttt tcaggctttg atggctcaat gggtatgggt
      181 ggttatgccg gaacggtgaa tgtaggtgat gtgttggaaa tatccatttg ggaagcacca
      241 cctgccgtgc tatttggtgg aacatttagt gcagaagggc aaggtaatgg gcatttaacc
      301 caattaccac agcaaatggt gaaccaaaat ggtacagtaa ctgtgccttt tatcggtaac
      361 attaaagtgg cagggaaaac gcctgaagct attcaaaatc aaattgttgg agcattaagc
      421 cgtaaggcca atcagcctca agcattagtt cgtattgcga ataacttgtc gtctgatgtt
      481 acggttatcc gccaaggaaa tagtattcgt atgccattaa gcgcaaataa tgagcgcatt
      541 ttagatgccg ttgcggcagt aggcggtaca agcgaaaata ttgaagatgt aacggttcgt
      601 ttaacacgtg gaaataaagt acgttcgatg gcgtttgaaa ccttaattgc cgacccttca
      661 caaaatatta cattacgttc aggcgatgtt gttgcattaa tgaatacacc atatagtttt
      721 accggtttag gtgctgtagg caataaccag caaatgcgtt tttcaagtaa aggcattacc
      781 cttgctgaag ccattggtaa aatgggggga ttaattgatg atcgttcaga ccctcgtggt
      841 gtgttcgtat tccgtcatat tccttttaca caattagatt acgataacca agctcaatgg
      901 cgtgaaaaag gttatgcaga gggaatggac gttccaactg tttatcaggt gaatttatta
      961 gaaccgcaat caatgttttt attgcagcgt ttccctattc aagataaaga tattgtgtat
     1021 gtgtcgaatg ctccactgtc tgaatttcaa aaattcttga gaatgatttt ctccattact
     1081 acaccaatta caggtacagc taatacaatt agagcgtact aattagctca tagataaaat
     1141 ggtaaaaaat cattaaaaaa tgaccgcttg taacactttt cgttgaggat tttatgtcaa
     1201 agaagaaaaa acatttttta gccaaccctt tgttgtggct aactgtaatt attccaactg
     1261 cttgttccgg aatttattat tccttatttg cctctgatat ttatgtttca gaatctagct
     1321 ttgtggttcg ttcaccgaat aatcaatcca gcttaaccgg cgtgggtgct ttattgcaaa
     1381 actccggttt cgcccgttct caagatgata cctattcagt tcaggaatat atgcgttccc
     1441 gtaccgcatt agagcaactt gaagcagaaa ttccggtaaa acgtttttat agtgaacaag
     1501 gtgatttact aagcaaattt aacggtttcg gatttaacga tacccaagaa gcgttttatc
     1561 gttactttaa agaacatctg aatattgatg tcgattctat ttcaggtatt gcgacgttac
     1621 gcgttcgtgc ttttaatgcc gaagaagggc agaaaattaa tgagaattta ttacagcaag
     1681 gggaaacatt aattaaccgc cttaatgaaa gagcaagaca agatacggtt gagtttgcag
     1741 aagaacgcgt aaaagaggcc gaaaaagatg tcaataatac tgcgttagca ttaagccaat
     1801 atcgaaccaa aaataaaatt tatgatttac cggcacaatc cggcgttcag ctctcattaa
     1861 tttctacctt aaaaagtgaa ttaattcggg ttgaaacaca attagcacaa ttgcagtcaa
     1921 ttacgccgga taatcctcag gtagccgcat tacagatgcg tcaaaaaagt ttgaaaaaag
     1981 aaattgatga tcagtcaaaa caacttgccg gcggtaatac ttccgtagcg acccaaacgg
     2041 cagaatacca acgcttagtt ttagccaatg agctagctca acaacagttg gccgcagcaa
     2101 tgacctcact acaaaataca agaggagatg ctgatcgcca gcaactttat ttggaagtga
     2161 ttggtaaacc aagtaaacct gactgggcat tagaacctta ccgaatttat aatattattg
     2221 cgactttctt tatcggtttt attttattcg gtgtattaag tctattagta gcaagtatta
     2281 gagagcataa aaactaatgc gatacggtga caatacaacc tttaaacgtt cccgtgtgat
     2341 tcaaaaacga gtgattcatg ccctattaat gcgtgaatta attacacgtt atggacggca
     2401 aaatctcggc tttttatggc tgtttattga acccttacta ttaacattag tgatggctat
     2461 tgcctggaaa tacataaaag cagataagtt ttcaactctc aatattattg cgtttatgat
     2521 tacaggctac cccgttgcta tgatgtggcg gaatgcgtct aatagagcac tgggggcaat
     2581 atcttctaat ttaagtttac tttatcatag aaatgttaaa gtattagata ccatctttgc
     2641 acgagtttta ttggaagttg caggcgcatc tattgctcaa attctcttaa tggctatatt
     2701 catcgctatt ggttggatag aaatgcctaa cgatattttc tatatgctct gtgcctggat
     2761 attaatggca ttttttgcct taggactcgg cttaattatt tgtgctttag cgcattacat
     2821 tgaaccattt ggaaaaattt ggggaacatt aagtttcttt ttactcccgc tgtctggaac
     2881 cttctttttt gtgcataatc ttccgccaac tgctcaacag attgtgctat ggtttccaat
     2941 gattcacggc acggaaatgt ttagacacgg ctattttgga gaaactgttg ttacctatga
     3001 aaatattagc tacatagtaa taaacgacct tattcttcta ttcatcggct tactctttgt
     3061 taaaagtttt agtaaaggaa tcgaacctag atgatcagtg tgaaaaatgt gagtaaacgt
     3121 tatagaacaa atagcggttg gcgtaccgtt cttaaagata ttaactttga gctaaaaaaa
     3181 ggtgaaaaag tgggtatttt agggcgcaat ggcgcaggaa aatcaacctt aatccgttta
     3241 atgagcggag tagaaccccc ttcaacaggc acaatagaac gccaaatgtc aatttcttgg
     3301 cctctagcat ttagcggggc tttccaaggc agtttaaccg gaatggataa tctacgcttt
     3361 attagccgaa tttacggggc tgattttgac tatgtaaaat ctttcaccga agaattttca
     3421 gaactcggtg aatatttata tgaaccggta aaaagctact cttctggtat gaaagcaaga
     3481 ctcgcttttg ccttatcgct ctctattgaa tttgattgtt acttaattga tgaagtgatt
     3541 gcagtaggcg atgctcgatt ctctgccaaa tgtaagcacg agctttttga aaaacggaaa
     3601 gaccgttcat tgatattagt ctctcatagc ccggcctcaa ttaaagaata ttgcgattct
     3661 gcaatggttt tagaagaggg tatcatgcat acttttgatt ctatagacaa cgcttataat
     3721 ttctacaata aaacataaaa gaacaagcgg ttatatttca caagtttttc acaaaaaact
     3781 ctcaaaatat aaccgcttgt tactaaaact gaaaattaga aacctgcgtc tttttctaat
     3841 tgttcaacta atgcctcaga taaacctaaa gcctcagcta aattagccaa gaaaacaatt
     3901 tctttgcgct ctaaatctct gcatactgca cgggaagcta agtaaacttg tgtagccaat
     3961 gcttggtcat tacctacctg gtgggcaata tcttcaactg tagccggagt gtccatttct
     4021 tgacgaatcc actcaatgac ttcagcctca tctccaactt gggaaacaat agctgctttt
     4081 tcctcttcag taatagcacc atctgatgca gcagcggcaa tcattgcttg taaaatcact
     4141 ttacttgcca cattttcatc tacattttca aaattatttt ggctaagttc tgaaaccgat
     4201 gaattttgcg cttgatactt ttggtatgct tgataagcaa ggctaccgat agcggctaaa
     4261 gagcctaatt ttgctaaact tgaaccgcca ttacgcccaa ataacattga aattaaacca
     4321 atagcgacag cgccgccacc aattttagcg atttgatcgt ttttagaatt acctttaatt
     4381 aatccgtttg tagcggcatc ttttgctgta tctaatactt gacttaaaat cttactgaaa
     4441 tccatttttg ttcctcttgg taagtaaatg aaatttactc attagtcctt agattcaaac
     4501 aagagttcaa ttcaaattaa agataatttc cacaacagtg cttaaacttc tttccggagc
     4561 cacatacaca aggttgtttt tgatgaggca aaggtacggt aggatccaca aaaaaccatc
     4621 gctcatcaat ttgaacaaaa agagaggttt cgtggtgtcc ctgtatcccc tcatctgtat
     4681 caaaaaaggc tttaaattca acctgactat gtattctcga aagagaaggt aagtgattta
     4741 gcacggataa tcctacccat tttgtatttt cagcccactc tttcattgca gtctgatcaa
     4801 gtaatttctg ctgacttggc actgtcgttt ccacaatata gggaatatta accaaagtat
     4861 aagcactgta acgggagcgc attaattgct ctgccgttga tgcaaatgtc tgttttaaat
     4921 ggaaaggttg gcaacattca gcgtagcgtt tgcctgtttg gcaaggacaa gcggtgattt
     4981 tttctaacat ttttacattt ccgcataaaa ataaagatgt gaaaagttta cgctataaat
     5041 aaagaaaaat aaattttata aaaaagcgtg acatacccct tgtggataac ttatgcaaaa
     5101 atcgtgaatt ttttgggtat tcattgcttt aaaaagcctt tattctatag attgtggata
     5161 acttaagatt ttatccacag gttaatttat tggttaattg atagtattca cctatttaaa
     5221 ttatactaac ttattgtttt taaatgaaaa gatcttttgt tcacagaaaa attaggatct
     5281 aataagagta aga
//
LOCUS       DANLXD010000137         5047 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.138, whole genome shotgun sequence.
ACCESSION   DANLXD010000137 DANLXD010000000
VERSION     DANLXD010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5047)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5047)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5047
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.138"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            6..584
                     /locus_tag="PXD18_002351"
     CDS             6..584
                     /locus_tag="PXD18_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302729.1"
                     /translation="MIEFDQIDDSFYHFPFRPRPGDTSSDTATPCIGGVDLVSNPEKV
                     ELIPEAAHSPMLKKLLTDLNTPNSKLLTLGCAYWAHKDNRDTSYAYLEFSFREHSVAT
                     NLEFIRSIDEQFEQFLQENKKQLSIEFSVPEQAFDIVSQALFWSIRPFSYFGSEERIL
                     IYFQAGSPRHQDLEIFLDLLHRFLTEYLVVPA"
     gene            complement(599..674)
                     /locus_tag="PXD18_002352"
     tRNA            complement(599..674)
                     /locus_tag="PXD18_002352"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(639..641),aa:Trp,seq:cca)
     gene            1101..1295
                     /locus_tag="PXD18_002353"
     CDS             1101..1295
                     /locus_tag="PXD18_002353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302730.1"
                     /translation="MALSRTEIVNRSNAKRGIKLKAFKLHESTIAQIEQLAQQLNIPQ
                     NQLIKLAVEKLQEQTNFTTG"
     gene            complement(1263..1628)
                     /locus_tag="PXD18_002354"
     CDS             complement(1263..1628)
                     /locus_tag="PXD18_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302731.1"
                     /translation="MQIDVKGVLNLWGGYVRFTDCKGYPTMQAFMRESPQERTKQRYL
                     ARLDDDTLEKVDRQMRKLQANDKRQFDVLFYKYAVGLENKQVWQKLSLSKTSYHTELL
                     LAERFMEGALAGSEIRLLL"
     gene            complement(1618..1986)
                     /locus_tag="PXD18_002355"
     CDS             complement(1618..1986)
                     /locus_tag="PXD18_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HDL6302732.1"
                     /translation="MSDWLEIALPYPPSVNHYWKHTRNGRHYISDKGKAFRAEVVKIC
                     KMFDPFKGAVQTVLQIYYPDKRKRDPDNLEKALWDALKIGGLIEEDDNQILVDKRTIT
                     AGFKKGGMVVLKIKAVGNAN"
     gene            complement(1983..2267)
                     /locus_tag="PXD18_002356"
     CDS             complement(1983..2267)
                     /locus_tag="PXD18_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005672808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1364 domain-containing protein"
                     /protein_id="HDL6302733.1"
                     /translation="MANLRKEAKGRECQVRLPGICNHNPETVVLAHYRMAGLNGVGMK
                     PDDIFGAWACSSCHDECDRRTRKLEADYVRQAHAEGVFRTQAILRREGKL"
     gene            complement(2644..2856)
                     /locus_tag="PXD18_002357"
     CDS             complement(2644..2856)
                     /locus_tag="PXD18_002357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302734.1"
                     /translation="MKKNVIRYWLSVPFRIIAVLISLSILTLRYIGYLLIYPLAFFVA
                     VGSFIVIGQWKYQECLDDFKSDFNPI"
     gene            complement(2906..3358)
                     /locus_tag="PXD18_002358"
     CDS             complement(2906..3358)
                     /locus_tag="PXD18_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1367 family protein"
                     /protein_id="HDL6302735.1"
                     /translation="MAKYQMMKLPGGILSPLNDEEAERLKSFQNGEQYEIEIKRQRNP
                     AFHRKVFAFFNFCFDCWSGSHSDWEFQDPTAQFDTFRKHLTVMAGFYVQTWNLKGQVR
                     IEAKSLSYANMEQDEFEQAYKALINAAIKHVFNNTKDENTINQLYSFF"
     gene            complement(3477..4049)
                     /locus_tag="PXD18_002359"
     CDS             complement(3477..4049)
                     /locus_tag="PXD18_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL6302736.1"
                     /translation="MTDFDKDTYQTPKYFRNWLNHRYAWFHIDGCSNGKNALYSYWIG
                     KAAEGLDEDTLSGQIAEDFLAENLLDVILERVADWGELLRIFVNPPYSNPLPFVQRAA
                     ELKKAGHIVVMLLPADKSTRWYQVIQENASEVIDIIGGRINFINPLTGEEVKGNNKGS
                     MVAVFDPFVEGIVTRQMPLDKIKELGGYEK"
     gene            complement(4046..4693)
                     /locus_tag="PXD18_002360"
     CDS             complement(4046..4693)
                     /locus_tag="PXD18_002360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HDL6302737.1"
                     /translation="MSLQKTEQNRPLAVLGEQQGKLSGEVESLVDRIFDQLLASCPSI
                     QYWSEKQVATAKKQWILGFAENGIRTVEQVRQGMKALRAKTDDFVPSIGKFIQWCNTI
                     DYHELGLPDLEQLLKLLDRSLRFDFIEIQKLKFKSNAEYWLITDLYARNKKYSWKDET
                     LRNQAEKALVAMAKRIMSGEQIPPPKPLIEEKKKVPIDPRIQRILDEKKQAGAMQ"
     gene            complement(4693..4977)
                     /locus_tag="PXD18_002361"
     CDS             complement(4693..4977)
                     /locus_tag="PXD18_002361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302738.1"
                     /translation="MLLEQFGITGKLAEDFIVHRKAKKAPITETALNGYQREADKAKI
                     PIQKAVEIAIERGWTGFKADWQWQDDQPKHRPKDNMRAEWNNPEAWAEVF"
BASE COUNT         1464 a         1214 c          848 g         1521 t
ORIGIN      
        1 taaaaatgat tgaatttgat caaattgacg atagtttcta tcacttccca tttagaccac
       61 gtccgggcga cacttcaagc gacactgcca caccttgtat tggtggagta gatcttgttt
      121 ccaatcctga aaaggtagaa ctaataccag aagccgcaca ctccccaatg ttaaaaaagt
      181 tactcacaga cttgaacact ccaaacagca aacttctaac actaggctgt gcttattggg
      241 ctcataaaga caatagagat acatcatacg cttacttaga gttttcattc cgggaacatt
      301 cagttgcaac taacctagaa tttatcagaa gtattgatga acagttcgag caattcttgc
      361 aagaaaataa aaagcagtta tctattgaat tttccgtgcc tgagcaagca tttgatatag
      421 tttcacaagc tcttttctgg agtattcgtc cattttctta cttcggaagc gaagagcgca
      481 tcttgatata ctttcaggct ggtagtcctc gacatcagga tttagaaatc tttttggatt
      541 tactacaccg ctttttgact gagtatttag ttgttccagc ataacattta ctcgcatttg
      601 gaaagggtgg ttggactcaa accaacaacc aacgattttg gagaccgttg ctctacctat
      661 tgagctacac ccttaaaatc cgtaaacaaa aaagccccaa gcatttctgc tcagggctgt
      721 aaaattcttt taagttcacc acctatgcaa tgaaccgcaa cttaccataa ataatataga
      781 ttaagtccga actttgcaac actttttaat catttaaatg caaaaaagcc cataatttac
      841 aaaaccatgg gctttttaac gatattttgc ttgaatatat tggttatcca acatataata
      901 aacttgtttt cagtaatagt gctggaaacg agccggtggc gacctttaat cccaccgact
      961 tttggaggga taacaaatgc tttaccgcat tatcctagtt atcattctct tagtgattag
     1021 cctgccagca tactaattga atgaaactaa gtagggggag aaatctccct actcttcaaa
     1081 acctatatta aggatttatg atggcactgt caagaaccga aattgtaaac cgtagcaacg
     1141 caaaacgggg aattaaactt aaagccttta aactgcacga aagcacaatc gcacaaatcg
     1201 agcaacttgc ccaacagtta aatattcccc aaaatcaact aattaaatta gccgttgaga
     1261 agctacaaga gcaaacgaat ttcactaccg gctaatgccc cctccataaa tcgttcagca
     1321 agaagtaatt ctgtatgata tgaagtcttg ctgagcgata acttctgcca aacctgctta
     1381 ttctctaacc ctactgcata tttataaaat agtacatcga attgtcgctt gtcgttcgct
     1441 tgtagcttcc gcatttgccg atcgactttc tcaagcgtat catcatctaa gcgggctaaa
     1501 taacgctgtt ttgttctctc ttgtggagac tcacgcataa atgcctgcat tgtcggatag
     1561 cccttgcagt cggtaaaacg cacatatcca ccccataaat ttaatacacc ctttacatca
     1621 atttgcatta cccaccgcct taatctttaa caccaccatt ccccctttct taaaacctgc
     1681 cgtaatggtt cgcttatcga ctaaaatttg attatcgtct tcttcaatta agccaccgat
     1741 ttttaatgcg tcccacaagg ctttttctaa attatctgga tcacgcttgc gtttatcagg
     1801 atagtaaatc tgcaataccg tttgtaccgc tcctttaaac ggatcaaaca ttttgcagat
     1861 tttcaccact tccgccctaa aggctttccc cttatctgaa atataatgcc taccgtttcg
     1921 ggtatgcttc cagtaatggt tcacactcgg cggataaggc aacgcaattt caagccaatc
     1981 actcataatt tcccttctct ccgtaaaata gcctgcgttc taaatacgcc ctctgcatga
     2041 gcctgtctca cataatccgc ttctaatttg cgagttctac ggtcgcactc atcgtggcag
     2101 ctactgcaag cccacgcccc gaaaatatca tcgggtttca ttcccacacc gtttaatcct
     2161 gccattcgat agtgagccaa taccaccgtt tccggattat gattacagat acccggtaaa
     2221 cggacttggc actctctgcc ttttgcctct ttgcgtagat tagccattcc aacctccttg
     2281 gtctctttta tcaaaccact caataaaaaa gagtgaaccg gcacatacac taagaatagc
     2341 gatagtgatt aaaattacag tcagttcatt gcactggctc acttattaat ctccttaaat
     2401 taaataacat tccacataaa aggaataatc cgcaaccgat aacaaacgat attaaaatcc
     2461 aaaaccctaa ctgaataatc accataaacc acggtgcgtt tttaatattc attaaagtag
     2521 tattaatcgc caataaacag cttggaataa tgccaaataa catcacgagt gcgatagttt
     2581 caaagaattt ttgtcatttt gatttctcct acccccgaat tcgagggaat taataaacac
     2641 acactaaatc ggattaaaat cgctcttaaa gtcatcaagg cattcttgat atttccattg
     2701 accgataaca ataaaactac cgactgccac aaaaaatgct aatggataaa tcaataagta
     2761 cccgatatat ctaagagtaa gaattgacaa agaaataagc actgcaataa ttctgaatgg
     2821 cacgctaagc caatatctaa taacattctt tttcatttta atctcctgca attaaaccta
     2881 attaaatatg gcgatttcgc cttaattaaa aaaacgaata caactgattt atcgtattct
     2941 catctttggt attgttaaaa acgtgcttga tagctgcatt aatcaacgct ttataagcct
     3001 gctcgaactc gtcttgttcc atattggcgt agcttaggct tttcgcctca atccgcactt
     3061 gcccttttaa attccacgtc tgcacataaa accctgccat tacagttaaa tgcttgcgga
     3121 aagtatcaaa ttgagcggtt ggatcttgga actcccaatc ggaatggcta ccactccagc
     3181 aatcaaaaca gaaattaaag aacgcaaaca ccttgcgatg aaaagcggga ttacgctggc
     3241 gtttaatctc gatttcgtac tgctcgccat tctgaaacga tttcaaccgc tcggcttctt
     3301 catcgtttaa cgggcttaaa atcccacccg gcaatttcat catttggtat ttagccatct
     3361 ctatccctca atgaaaatcc aaaagctcta aataccaaat atgctaacca cccgaagaaa
     3421 attagaatcc ctaaaaatcc aatagtagaa tcactcatca cacttcccac ccttcgttat
     3481 ttttcatagc cgcccagctc cttaatctta tccagcggca tttgacgggt aactattccc
     3541 tccacaaacg ggtcgaacac cgctaccatc gagcctttgt tgttgccttt cacttcctcg
     3601 cctgtgagcg gattaataaa attaatacgc ccaccgataa tgtcgatcac ctcactagcg
     3661 ttttcttgga taacctgata ccaacgagta gatttgtctg ccggcaacag cattaccaca
     3721 atatgaccgg cttttttcag ctccgcagca cgctgaacaa aagggagtgg attgctatat
     3781 ggcggattaa cgaagatacg gagtaattcg ccccaatctg ccacacgttc caagatcaca
     3841 tcgagcaagt tttctgccaa gaaatcctcg gcaatctgac cacttagcgt gtcttcgtcc
     3901 aagccttctg ccgctttgcc aatccagtag ctatacaatg cgtttttgcc gttagaacaa
     3961 ccgtcaatgt gaaaccacgc atagcgatga tttagccaat tacggaaata ctttggcgtt
     4021 tggtaagtgt ctttatcaaa atctgtcatt gcattgctcc tgcttgtttc ttctcgtcca
     4081 aaattcgctg aatgcgtgga tctattggca ctttcttttt ctcttcgatt agcggtttag
     4141 gtggtggaat ttgctctccg ctcataattc gttttgccat tgccactaag gctttttctg
     4201 cttgattacg taaggtttca tctttccaac tatatttctt gttacgtgcg tataggtcag
     4261 ttatcaacca atattcagcg tttgatttaa atttaagttt ctgaatctca ataaaatcaa
     4321 atcttaaaga gcgatccaaa agcttgagta actgctctaa atcaggtaat cctaattcgt
     4381 gatagtcaat cgtattgcac cactggataa atttgccgat actcgggacg aaatcatcag
     4441 tttttgctct taacgctttc ataccctgtc gaacttgctc aaccgtgcgg attccgttct
     4501 ccgcaaagcc taaaatccat tgttttttgg ctgtggcaac ttgcttttcc gaccagtatt
     4561 gaatacttgg gcaactcgca agcaactggt caaatattct gtccacaagg ctttcaacct
     4621 caccggataa tttgccttgc tgctcaccta acaccgcaag cggtcgattt tgctctgttt
     4681 tttgcaggct catcaaaaca cctccgccca cgcttcaggg ttattccatt cagctcgcat
     4741 attgtctttt gggcgatgtt taggttgatc gtcttgccac tgccaatcgg ctttaaatcc
     4801 tgtccagcca cgttcaatcg caatttctac cgccttttga atcgggattt tggctttgtc
     4861 tgcctctcgc tgatagccat tcagtgcagt ttcggtaatc ggggcttttt tggctttgcg
     4921 gtgtacgata aaatcctccg ccaatttgcc tgtaatgccg aattgttcaa gcaacaccaa
     4981 cacagcagat tttttagtct cacgtgtgtg tgcgttaata cccgtaaggg tattattatg
     5041 atcatta
//
LOCUS       DANLXD010000138         4883 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.139, whole genome shotgun sequence.
ACCESSION   DANLXD010000138 DANLXD010000000
VERSION     DANLXD010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4883
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.139"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            109..867
                     /locus_tag="PXD18_002362"
     CDS             109..867
                     /locus_tag="PXD18_002362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03761 family integrating conjugative element
                     protein"
                     /protein_id="HDL6302739.1"
                     /translation="MTTPLDLQLGPLRSEITFTLHTQYAHKLWMGRPMIRNEEGKVTQ
                     SSIISVPNCFAMLTQIQRAASEDDPYADDYLIQFEESVINYRKEIQKLTNDIVTLYAK
                     MLPEGISIERCANISPISYPIYVNSQLGYQLLYLLGDFDSLCRSVMTAAHIAIINRAE
                     AQDWIEAGARLIRKCFGIVERYKNSGITRRDYQENNARYQAAVKRMGYTLSDAVLTGE
                     HRAEFAPFIKQNGIVEEEQPVETHITTQANESQE"
     gene            876..1385
                     /locus_tag="PXD18_002363"
     CDS             876..1385
                     /locus_tag="PXD18_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3158 family protein"
                     /protein_id="HDL6302740.1"
                     /translation="MNLISDEIYRQLVKDSGLNASLKQLFSHFDTVSDYAVLQEQIQQ
                     ARAYFMNAQDGMVQYVRSEFSPLAVYMIKDKASSSGGTFLRWRSMQNARTGGTVWQPI
                     VDDESVPVDVRQKVVAVEKDRILINMQISVFNHILRQLVDCTEKLKEVDNAVAKSGLY
                     PLKNPVCNP"
     gene            1491..1691
                     /locus_tag="PXD18_002364"
     CDS             1491..1691
                     /locus_tag="PXD18_002364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302741.1"
                     /translation="MANVKMKFSVEIDGEVIIQHEIEEQAEKRSYFSQERKLAKEIIN
                     KMNEFYSDRWIDAKPWIASDDK"
     gene            complement(1807..2010)
                     /locus_tag="PXD18_002365"
     CDS             complement(1807..2010)
                     /locus_tag="PXD18_002365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302742.1"
                     /translation="MELRKFPHHIIFIEQAKYGLQNYLLFELLTRTGQAVYFKHPIFH
                     TPNKEMRIVFVQDHKFLSLWQNK"
     gene            2119..2637
                     /locus_tag="PXD18_002366"
     CDS             2119..2637
                     /locus_tag="PXD18_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL6302743.1"
                     /translation="MRYIKYSLLLISTMIMSGCAELSAINDKVGDWAGQMNQTLYGSK
                     ESSVEQHNGRQVYIKTRNGKYVYQDSGTLQLKQNIDEVFLKVRREFGFRPTNADSDAR
                     KVYHTVQGTFYHVSGYFKSDVDNDGVDLGENYLEVIIEKGSKGTVNVEWKATGSTRWL
                     DSTKQRLLNTLK"
     gene            2798..4849
                     /locus_tag="PXD18_002367"
     CDS             2798..4849
                     /locus_tag="PXD18_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HDL6302744.1"
                     /translation="MKLFICEKPSQARDLASVLGATSKGDGLLATNDKSIIVTWGFGH
                     LVEQYQPEDYDEVWKRWAFETLPIIPAQWKMAPKKESKKQYNVVIGLIKKASLVVIAT
                     DADREGEMIARELLDLAGYRGQIQRCWLSALDDASIRKALQTLKSGKETEALYYAGMG
                     RSRSDWLIGMNFSRLFTLMAQAKGYSGKPLSVGRVQSPTLALVVNRDREIANFVPKAH
                     YSLAVQLATASDETFVAGLSIPEQYLDESGLCLDSRVIQQAEAQIKQVGIAKVITVET
                     KREKKAPPLLYALSDLQGECNRLFGFGAQQVLDIAQSLYEEHKITTYPRTDCGYLPES
                     QLTEVPMVIRSLVAADSELQTLLPRLNLQQKSRAWDDKKITAHHGIIPTIKKADLSKL
                     SEEEMKVYDLIRRRYLAQFLPHLETDKTIATLQSSGHTLIARGNVIVSQGWRILFGKN
                     ADEDVGSDDEKQGLPALTANQQCRVTHSEVRTLQTKPPAHYTEGTLLEAMKNAARFVT
                     DPRLKQRLRETEGLGTEATRAGLIQGLIDKGFLIKKKKSLMASAEAIALIDSLPDLLK
                     NPGLTALWEQALNQIAEGSMTLDDFMQRQETFVRQLIGNCMQQGMSLGNIEIRKCPEC
                     GKPMRKINHAKGTFWGCTGYPDCQHKEADKKVKSTSNKSTKKNSSLNVLDQLNKLRSQ
                     L"
BASE COUNT         1582 a          915 c         1012 g         1374 t
ORIGIN      
        1 tgattaaaaa ataaacagag tagacagtgt ctacaaaggt taaaaaaata gacaatggaa
       61 agcccctttc caaaggctaa aaaacaatca aataaacaag gagcatatat gaccacacca
      121 ttagacttac aattaggtcc acttcgtagt gagatcacgt ttacgctaca tacccaatat
      181 gcccataaat tatggatggg gagaccaatg attcgtaatg aggaaggcaa agtaactcaa
      241 tcctccatta tcagcgtacc aaattgcttt gcaatgctaa cccaaattca acgggctgca
      301 tcagaagatg atccttatgc tgatgattac cttattcaat tcgaggaaag tgtgatcaat
      361 tatcggaagg aaattcaaaa actcaccaac gatattgtca cgctctacgc caaaatgttg
      421 ccggagggaa tttctattga acgctgtgcc aatatttccc cgatttctta cccgatttat
      481 gttaattcac agttaggcta tcagttgctt tacttacttg gtgattttga cagtctttgt
      541 cgctcagtaa tgacagctgc tcatattgcc attatcaatc gtgcagaagc tcaagattgg
      601 attgaagcag gtgcaagatt aattcgtaaa tgttttggga ttgttgaacg ttataaaaat
      661 tccggtatta ctcgccgaga ctaccaagaa aataatgctc gctatcaagc tgctgtaaaa
      721 cgaatgggct atacattgtc agatgctgta cttaccggtg agcatcgtgc tgaatttgct
      781 cctttcatca agcaaaacgg cattgttgaa gaagaacaac ccgtagaaac ccatatcacg
      841 acacaagcaa atgaatctca agaataagga gtgatatgaa cctcatttct gatgaaattt
      901 atcggcaatt agtcaaagac tccgggttaa atgcatctct gaaacagcta tttagccatt
      961 ttgatactgt ctcagactat gctgtattgc aggagcaaat acagcaagca cgggcttatt
     1021 ttatgaatgc acaggatggt atggttcagt atgttcgtag cgaattctct ccccttgcgg
     1081 tctatatgat taaagataag gcttcttctt ccggtggtac gtttttacgc tggcgcagta
     1141 tgcagaatgc cagaaccggt ggcacagttt ggcaaccgat tgtagatgat gaatcagtcc
     1201 cggtcgatgt gagacaaaaa gttgtcgcag tggaaaaaga cagaattttg atcaatatgc
     1261 agatttccgt gtttaaccat attttgcgac agttggttga ttgtactgaa aaactaaaag
     1321 aagtggataa tgcggttgca aaatcaggtt tgtatcccct gaaaaatcca gtttgtaatc
     1381 cctgaaaaag taaggtttgt aaagcctgca ttaaaaggcc ttttaaaggt aaggggacaa
     1441 gcccccttac ctttcacgaa gaaaatgcct ttattatttc ggagtaaaca atggcaaatg
     1501 taaaaatgaa attcagtgtt gaaatagatg gtgaagttat cattcaacat gagattgaag
     1561 agcaagccga aaaacgctct tacttttcgc aagagcgtaa attggccaaa gagattataa
     1621 ataaaatgaa tgaattttat tctgacagat ggattgatgc aaaaccttgg attgcttctg
     1681 acgataaata aaagcaatga gcatcatcga ttacaggttt cataaattga tttcgctaag
     1741 gtatttaact taatagcaat aaaatcttcc tgagtgtagg acgatttatc ccattcttta
     1801 ataaggttat ttgttttgcc atagggataa aaatttatga tcttgaacaa agacaattct
     1861 catctctttg ttaggggtat ggaatatcgg atgcttaaag taaaccgctt gtcctgttct
     1921 tgttaatagt tcaaagagta agtaattctg taatccgtat ttagcttgct caataaagat
     1981 aatgtggtga ggaaattttc ttaattccat aatagtccct agcattttct ctcttactac
     2041 ctaaaagaat tttaagtaga ttttaaccgc acttttgcaa aaaatgaatg cagataaccc
     2101 gcttgtaagg agaattccat gcgttacatc aaatatagct tacttctcat ttctactatg
     2161 attatgtcag gttgtgccga actttctgca attaatgata aggttggaga ttgggcagga
     2221 cagatgaacc agactctcta tggttctaaa gaaagctcag ttgaacagca taatgggcga
     2281 caggtttata ttaaaactcg aaatggcaag tatgtctatc aagattccgg cacattacag
     2341 ttgaaacaga atattgatga agtcttccta aaagttcgcc gagaatttgg cttccgtcca
     2401 accaatgcag atagcgatgc acgtaaggtt tatcatacgg tacaaggtac cttttaccac
     2461 gtttccggtt atttcaaatc tgatgtagat aacgacggcg tggatttagg tgaaaactac
     2521 ttagaggtta tcattgaaaa aggcagtaaa ggcacggtga atgttgaatg gaaagccaca
     2581 ggtagtacaa gatggctaga tagtaccaaa caacgtttac ttaatacatt aaaataagaa
     2641 ctcatatcgc tcctagaacc tcttcccagt ggaaacactg ggattttttt atcgttctca
     2701 tctctcaatt tattgcattc tacaagataa taagtcgttg aatgctattt aatcagcaca
     2761 ttactattgc ctatccgtat tgattttgga aaatagtatg aaactgttta tttgtgaaaa
     2821 gccctctcaa gcccgagatc ttgcaagtgt attaggtgct acatcgaaag gggatggact
     2881 attggcaact aatgataagt ctattattgt aacttgggga tttggtcatc ttgttgagca
     2941 ataccaaccc gaggattatg atgaagtttg gaaacgctgg gcatttgaaa cattgccgat
     3001 cattcctgct caatggaaaa tggctcctaa aaaagagtcc aagaaacaat acaatgtagt
     3061 catcggatta attaagaaag cctctttggt tgtgattgca accgatgcag acagagaagg
     3121 tgaaatgatt gctcgtgaac tgttagattt agccggatac cgaggacaaa tacagcgttg
     3181 ctggctatca gctctcgatg atgccagtat ccgaaaagct ctccaaacac tcaaatcagg
     3241 taaagaaacc gaggcacttt actacgctgg tatgggacgt agccgctcgg actggctgat
     3301 tggaatgaac ttctcccgtc tatttacctt aatggcccaa gcaaaaggct attccggtaa
     3361 gccattaagc gttggtcgag tgcaaagccc aacactagct cttgtggtca atcgagacag
     3421 agagattgca aatttcgtgc ctaaagctca ttactcctta gcagttcaat tagcaacagc
     3481 gtctgatgaa acctttgttg ccgggctttc aatacctgaa cagtatttag atgaatcagg
     3541 gctttgcctt gatagtcggg tcatacaaca agctgaagct caaattaaac aagtaggcat
     3601 agccaaagtg ataacggttg aaaccaaacg agagaaaaag gcaccgccgt tgctttatgc
     3661 attaagtgat ttacaagggg aatgtaaccg cttgtttggt tttggggctc aacaagtact
     3721 tgatattgct caatcacttt atgaggagca taaaattact acttatcccc gtaccgattg
     3781 cggctatcta cctgaatctc agcttactga agtaccgatg gtaattcgtt cattagtcgc
     3841 cgctgattca gagttacaaa ctctattgcc tcgattaaat ctacaacaaa aaagtcgggc
     3901 ttgggatgat aaaaaaatta ctgctcacca cggtattatc cccactatca aaaaagcaga
     3961 tttaagcaag ttaagtgagg aggagatgaa ggtctatgat ctcattcgcc gtcgctatct
     4021 cgctcaattc ttaccgcact tagaaacaga taaaactata gccaccttgc agtcctctgg
     4081 acacactctg attgctagag gaaatgtgat cgtttctcaa ggttggcgta tcctgtttgg
     4141 taaaaatgca gatgaagatg ttggtagtga tgatgagaaa caaggcttac ctgcattgac
     4201 ggcaaatcag caatgccgtg ttacacattc agaagtccgg acattacaaa ccaaaccacc
     4261 ggcacactat actgaaggaa cactactcga agcaatgaaa aatgcagctc gctttgtgac
     4321 tgatccaaga cttaaacaac ggttgcgtga aacggaggga ttgggtacag aggcaactcg
     4381 tgccggattg attcaagggc tcattgacaa aggtttttta attaagaaga aaaaatccct
     4441 aatggcttct gctgaagcga ttgcccttat tgatagccta ccggatttat taaaaaatcc
     4501 cggtttaacg gctctttggg aacaggcact taatcaaatt gctgaaggca gtatgaccct
     4561 tgatgacttt atgcaacgac aagaaacctt tgtacgacaa cttatcggaa attgtatgca
     4621 acaaggtatg tcattgggta atattgaaat tcgaaaatgc ccggagtgtg gtaagccaat
     4681 gcggaaaatc aatcacgcta aaggtacatt ctggggttgt acaggatatc cggattgcca
     4741 acataaagaa gcagataaaa aagtcaaatc gacttcaaat aaatctacca agaaaaatag
     4801 tagcttaaat gtgctagatc agctgaataa attaagaagc cagttataaa tctaagcaga
     4861 ttatggtatt atcaaagtgc aaa
//
LOCUS       DANLXD010000139         4863 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.140, whole genome shotgun sequence.
ACCESSION   DANLXD010000139 DANLXD010000000
VERSION     DANLXD010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4863)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4863)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4863
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.140"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(350..2020)
                     /gene="glnS"
                     /locus_tag="PXD18_002368"
     CDS             complement(350..2020)
                     /gene="glnS"
                     /locus_tag="PXD18_002368"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HDL6302745.1"
                     /translation="MSEEILTAETGTRANFITHIIDEDLASGKHNNVYTRFPPEPNGY
                     LHIGHAKSICLNFGIAQDYNGLCNLRFDDTNPVKEDVEYVDSIKQDVEWLGFKWEGEP
                     RYASDYFDQLYGYAIELINKGLAYVDELSPDEMREYRGTLTEPGKNSPYRDRSVEENL
                     ALFEKMKNGEFAEGKACLRAKIDMASPFIVMRDPVLYRVKFAHHHQTGDKWCIYPMYD
                     FTHCISDAIERITHSLCTLEFQDNRRLYDWVLDNISIERPLPHQYEFSRLNLEGTLTS
                     KRKLLKLVTDGIVDGWNDPRMPTISGLRRRGYTPASLREFCRRIGVTKQDNVVEYSAL
                     EACIREDLNENAPRAMAVINPVRVVIENFGEKEILKAPNHPNRPELGERDLPFTREIY
                     IDEADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDASGRISTIFCTYDPDTLGK
                     NPADGRKVKGVIHWVSAEDNKPAEFRIYDRLFTVPNPGAEEDINAVLNPESLVVKHGF
                     VESSLAHAKPEQDYQFEREGYYCLDSKDGSADNLVFNLTVSLKESVAF"
     gene            complement(2181..2624)
                     /locus_tag="PXD18_002369"
     CDS             complement(2181..2624)
                     /locus_tag="PXD18_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HDL6302746.1"
                     /translation="MNLQQIQDRLALKDLVDTFSNLADEKKVAEQMPLFTQDAVVNTY
                     IGGKLVFEMHGVAEIEQVFTTFLTPFHSVYHLNGQHTVPFIDENNATAINYCAVKLVE
                     TKEGKEILHDHSVRYADTYVKQEGKWRIAKRIANFMISESREIRQ"
     gene            complement(2675..3250)
                     /locus_tag="PXD18_002370"
     CDS             complement(2675..3250)
                     /locus_tag="PXD18_002370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HDL6302747.1"
                     /translation="MKQILILGASGSLANVVIPELLKDNNVQLTLFARRPQSVAKFET
                     ERVKIVQGDVLDFHALTQAMQGVDAVYAGLAGDLKAMAGNVVNAMNEAQVKRLVWISS
                     MGIYGETGEDHGAILEPYRQSAAVIEASELDYTVVRPGWFTNGSEVQYQLTHKGEPFK
                     GHSVSRKSIADFVARILRENSEIRESVGIAA"
     gene            3357..4247
                     /locus_tag="PXD18_002371"
     CDS             3357..4247
                     /locus_tag="PXD18_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6302748.1"
                     /translation="MKENLNDLRAFLLVAQTSSFTKAAAQMGVSQSALSHSIRGIEER
                     LQIKLFHRTTRSISTTEAGERLYQRLLPLFDEIDQEVNGLSEFRNALKGGLRINGNEH
                     VFRDVLADKFAEFVKRYPEVALELVAEDRFVDIVAERFDAGIRLGADVAKDMIALRIS
                     PDVKMTAAASPNYLAQHGTPKTPFDLTEHHCLKHRLATLGGILAWEFRDPITKKIVKF
                     QPQGNLTANNGFLLQHYAKQGLGILWSPQDSIQTELDNGSLVPILTDWAMQYEGYHLY
                     YPNRRQNSPLLKALIDVLRG"
     gene            complement(4314..4835)
                     /gene="efp"
                     /locus_tag="PXD18_002372"
     CDS             complement(4314..4835)
                     /gene="efp"
                     /locus_tag="PXD18_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005704334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDL6302749.1"
                     /translation="MQDGEPCVIVENEFVKPGKGQAFTRTKIRKLISGKVLEINFKSG
                     TSVEAADVVDSNYNYSYSDGDFWYFMHPETFEQISVDEKALGDNVKWLVDNAECIVTL
                     WNGSAIAVTPPNFVELEIVETDPGLKGDTAGTGGKPATLSTGAVVNVPLFVQIGEVIR
                     VDTRSGEYVSRVK"
BASE COUNT         1331 a         1067 c         1024 g         1441 t
ORIGIN      
        1 atgctatcat aaaagagcat cacttttggt ttccaaagat tatagaaagc tcaaataata
       61 cactacctca taatttaaaa tgaaacgttt caattggaaa aagtggattt tgtgactgag
      121 atcacaaatt taaacattgg tctgtatttt tgagagattt tgtttgaaac tgccggcaaa
      181 ttcgcttaac cttaaggtaa caagaataag tgttgtacct agcaacctaa cacataaatt
      241 tgctttccga gtggccccaa gaattggggc tttttttatg cttgatgagt cgttttgaga
      301 gtaaaaaaat accagcatat ttgctggtat ttgaatgaag agagttagat tagaacgcta
      361 cgctttcttt taagctgaca gttaagttaa atacaaggtt gtctgccgaa ccatctttgc
      421 tgtctaagca gtagtaacct tcacgctcga attggtagtc ttgttccggt ttggcgtgag
      481 ctaaacttga ctcaacaaaa ccatgcttaa ccactaatga ttcaggattt agcaccgcat
      541 tgatgtcttc ttccgccccc gggtttggta ctgtaaatag gcggtcgtaa atgcggaact
      601 ctgccggttt gttatcttca gcagataccc aatgaatcac gccttttact ttgcgaccat
      661 cagccggatt tttgcccaat gtatccgggt cgtatgtgca aaaaatagtt gaaattcgac
      721 cgcttgcatc tttttccaca cgctcagctt taatcacata ggcattgcgt aaacgaactt
      781 ctttgcctaa gactaaacgt ttatattgct tattggcttc ttcacggaag tcggcttcat
      841 caatataaat ctcacgggtg aacggtaaat cacgctcgcc aagctctgga cgatttgggt
      901 gattaggggc ttttaatatt tccttttcac cgaagttttc aatcaccact cgaaccgggt
      961 taatcaccgc catcgcgcgt ggtgcgtttt catttaagtc ttcacgaatg cacgcttcaa
     1021 gggcagagta ttccaccacg ttatcttgct tggttacccc aatacggcga caaaattcac
     1081 gtaaagacgc tggggtataa ccacggcggc gtaagccgga aatggttggc atacgagggt
     1141 cattccaacc atcaacaatg ccgtctgtga ctaattttaa taatttacgc ttagaggtta
     1201 aagtaccttc taaatttaaa cgtgaaaatt cgtattggtg cggtaacggt ctttcaatcg
     1261 aaatattgtc cagcacccaa tcatataagc ggcggttatc ttggaactct agcgtacata
     1321 gcgagtgagt gattcgctca atcgcatcgg aaatgcagtg ggtaaaatcg tacatcgggt
     1381 agatgcacca tttatcaccg gtttgatgat ggtgagcaaa tttcacacgg taaagcaccg
     1441 gatctcgcat cacaataaac ggggacgcca tatcaatttt tgctctcaag caggctttcc
     1501 cttccgcaaa ctctccgttt ttcatttttt cgaataacgc taagttttct tccacgctac
     1561 gatcacggta agggctgttt ttgcccggct cggttaaagt accacggtat tcacgcattt
     1621 catcaggcga taattcatca acataggcta atcctttgtt gattaactca atcgcatagc
     1681 cataaagctg gtcaaaatag tctgaggcat aacgaggctc accctcccat ttaaaaccta
     1741 gccactccac atcttgctta attgaatcta catattccac gtcttcttta accgggttgg
     1801 tatcatcaaa acgcaagtta cataaaccgt tataatcttg agcgatacca aaatttaaac
     1861 agatagattt agcgtgtccg atatgcaaat aaccgtttgg ttcaggtgga aaacgagtgt
     1921 aaacattgtt gtgctttccg cttgctaaat cttcatcaat aatatgggta ataaaattgg
     1981 ctcgagtgcc agtttctgcc gttaaaattt cttcgctcat agttctctct aaatgtatca
     2041 ataaaaataa cggattattc tacacttaat tgaaacagac ttaaagacta aagcaaaatt
     2101 cctcggtttc ctccaaagaa ttttgctgtt ttagtaagat gcaatggaat tgcaaatttt
     2161 tagctaaatt taaccgcttg ttattgcctg atttcacggc tttcgctgat cataaaattc
     2221 gcaatccgtt tggcaatccg ccatttaccc tcttgtttaa cataggtatc ggcataacgc
     2281 acgctgtgat cgtgcaagat ctctttgccc tctttggttt ctaccagttt caccgcacaa
     2341 tagttgatcg ctgtggcgtt attttcatca ataaaaggca cggtatgctg accgtttaaa
     2401 tgataaacgc tgtgaaacgg ggttaaaaag gtggtaaaca cctgttcgat ttctgccacg
     2461 ccgtgcattt caaacaccaa ttttccgccg atgtaggtgt ttacgacggc atcttgcgtg
     2521 aaaagcggca tctgctcggc aacctttttt tcatcggcaa ggttagagaa tgtatctact
     2581 aaatctttta gtgctaaacg atcttggatt tgttgtaagt tcattgtgtt ttccttctga
     2641 tttttgcaaa ttttctttgg tttttcaccg cttgttaggc tgcaatacca acactttcac
     2701 ggatttcgct gttttcacgc aaaatgcgag ccacaaaatc ggcaatggat ttgcgggaaa
     2761 cgctgtgtcc tttgaacggt tcgcctttgt gagtcagctg atattgcact tccgaaccgt
     2821 tggtaaacca gcccgggcgg acaacggtat aatccaactc gctggcttca atcacggctg
     2881 ccgattggcg gtaaggctct aaaattgccc cgtgatcttc gccggtttcg ccataaatcc
     2941 ccattgagct aatccaaacc aagcgtttta cctgagcttc attcattgcg ttcaccacat
     3001 ttcccgccat cgcttttaag tcgccggcaa gtccagcgta aacggcatca acgccttgca
     3061 ttgcttgggt taatgcgtgg aaatccaaca catcgccttg cacaattttg acgcgttcag
     3121 tttcaaattt cgctactgat tgcggacgac gggcaaaaag ggttaattgc acattattgt
     3181 cttttagcag ttcaggaatc acgacattcg ctaggctacc gcttgctcct aaaattaaga
     3241 tctgtttcat tgctgttctc cattgaatga agtcagtata gcggtgtaga ttgcatttga
     3301 ttagtagggt aaaatcgctt gaagtaatga gaaaaattca ttaataaggt ggttaaatga
     3361 aagaaaacct caacgattta agagcttttt tgttggtagc acaaacgagc agttttacca
     3421 aagcagcagc acagatgggc gtgtcgcagt cggcgttgtc gcacagcatt cgggggattg
     3481 aagaacggtt gcaaatcaag ctgtttcatc gcaccactcg tagcatttca accaccgagg
     3541 caggggagag gctgtatcaa cggctgttac cgctgtttga tgaaatcgac caagaagtaa
     3601 atgggctgag tgagtttcgc aatgcgttaa aaggcgggct gagaattaac ggtaatgaac
     3661 acgttttccg tgatgtgctg gcagataaat tcgctgagtt tgtcaaacgt taccctgaag
     3721 tagcattgga gctagtggcg gaagatcgct ttgtagatat tgtcgccgag cgttttgatg
     3781 ccggtattcg gcttggggca gatgtggcga aagatatgat tgcactacgc atttcgcccg
     3841 atgtgaaaat gaccgcagct gccagcccca actatttggc acagcacggc acgccgaaaa
     3901 cgccctttga tttaaccgaa catcattgtc tcaaacatcg tcttgcgaca ttgggcggca
     3961 ttctggcgtg ggaatttcgg gatcccatca ccaagaaaat cgttaaattt caaccgcagg
     4021 gcaatcttac tgccaataac ggcttcttgc tgcaacacta tgccaaacaa ggtttaggca
     4081 ttctttggag tccgcaagac agcattcaaa ccgagctgga taacggcagc ctcgtgccga
     4141 ttttaaccga ctgggcaatg cagtatgagg gctatcatct ctattacccc aaccgtcgcc
     4201 aaaattcgcc tttgctgaaa gcgttaattg atgtgctgag aggataggta aaaatgagcg
     4261 gtcgttttta gcaaaaaatt gaccaaaaaa cgaccacttg tagagaagct aaattatttc
     4321 acacgagaaa catattcgcc tgaacgggta tccacacgga taacttcacc gatttgaacg
     4381 aataaaggca cgtttaccac agcaccggtg cttaatgttg ccggtttacc gcctgtacct
     4441 gcagtatcgc cttttaagcc cgggtcggtt tcgacgattt ctaactcaac gaagtttggt
     4501 ggtgtgactg caattgctga accgttccat aaagtcacga tacattctgc attatcaact
     4561 aaccatttta cgttgtcgcc taacgctttt tcatctaccg agatttgttc aaaggtttca
     4621 gggtgcataa agtaccagaa atcaccatcg ctgtaagagt agttgtagtt agaatctact
     4681 acatctgctg cttcaaccga agtgcctgat ttgaagttga tctctaatac tttgccagag
     4741 attaatttac ggattttagt acgggtaaat gcttgacctt tacccggttt tacgaattcg
     4801 ttttcaacaa ttacacaagg ttcgccatct tgaataaatt ttaaaccttt tttaaagtcg
     4861 tta
//
LOCUS       DANLXD010000140         4837 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.141, whole genome shotgun sequence.
ACCESSION   DANLXD010000140 DANLXD010000000
VERSION     DANLXD010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4837)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4837)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4837
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.141"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            25..483
                     /locus_tag="PXD18_002373"
     CDS             25..483
                     /locus_tag="PXD18_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HDL6302750.1"
                     /translation="MLLSVTVNAAPVELHQFDSPKQESDYRALIQELRCPQCQNNNIA
                     DSNATIATDMRAKTLELLKQGKSKDEVVDYMIERYGNFVTYDPPLTPATIMLWLLPLI
                     LIALGLGVVLRRKKNKPQAVNFEQNTAKPTTHLAQDEQERLNQILNKEEK"
     gene            480..1391
                     /gene="ccmI"
                     /locus_tag="PXD18_002374"
     CDS             480..1391
                     /gene="ccmI"
                     /locus_tag="PXD18_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcmI"
                     /protein_id="HDL6302751.1"
                     /translation="MNFWLAIIFVTLIVCGVAFYPLLKKNKQIDNTKRDSLNKAFYFD
                     RLKEVENEANEGVIDDPEQTKLELQKNLLDDIPHSTQSATSEKLTLGKSWFVALILFV
                     GGISFAIYSNVGSWFSNSMLDTTHQKLDSFYERLKTEETNPLSQEEMNQFAMALRVDL
                     QSNPNDDKKWYMLGQIGMALDDGQLAHDAFSKAAQLKPDNLDYKLSHAQLLLFSEAQE
                     DKKQGETLLKEIIRQDHTNFNALSLLAFHSFEKEDFKMAAMTWGMMLKLLPDEDPSKV
                     TVERSFNMALSNLSEAEKQELQKGEKK"
     gene            1388..1993
                     /gene="mog"
                     /locus_tag="PXD18_002375"
     CDS             1388..1993
                     /gene="mog"
                     /locus_tag="PXD18_002375"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HDL6302752.1"
                     /translation="MTACKPLSKEKLKIGLVSVSDRASQGVYSDQGIPELRAWLESAL
                     TEPFELETRLIPDEQAIIEQTLIELVDAHACHLVLTTGGTGPAKRDVTPDATLAVAHR
                     EMPGFGEQMRQVSLHFVPTAILSRQVGVIRHDSLILNLPGQPKAIKETLEGVKDEQGK
                     VLVKGIFSAVPYCLQLLSEIYVETHAAICESFRPKSARREN"
     gene            2003..2341
                     /gene="glnB"
                     /locus_tag="PXD18_002376"
     CDS             2003..2341
                     /gene="glnB"
                     /locus_tag="PXD18_002376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005654045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulatory protein P-II"
                     /protein_id="HDL6302753.1"
                     /translation="MKKIEAIIKPFKLDDVREALTDVGVSGMSITEIKGFGRQKGHTE
                     LYRGAEYAIDFLPKVKVEIVIPDELEEQCIEAIMETAQTGKIGDGKIFVYDVGRVIRI
                     RTGEENEEAI"
     gene            2422..2901
                     /gene="lspA"
                     /locus_tag="PXD18_002377"
     CDS             2422..2901
                     /gene="lspA"
                     /locus_tag="PXD18_002377"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HDL6302754.1"
                     /translation="MKTGLKFLWVSLIVIIIDLWSKYIVVQHFEFGESINILPIFNFT
                     YARNYGAAFSFLADHSGWQKYFFLGLAVVISSALVVALWKNQAVKKLENIAYALIIGG
                     AIGNAIDRAYNGYVVDFLHFYWDIYHYPVFNIADIAICVGAGLLILEAFITKKEPKK"
     gene            2912..3856
                     /gene="ispH"
                     /locus_tag="PXD18_002378"
                     /gene_synonym="lytB"
     CDS             2912..3856
                     /gene="ispH"
                     /locus_tag="PXD18_002378"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HDL6302755.1"
                     /translation="MKILLANPRGFCAGVDRAISIVELALEIHGAPIYVRHEVVHNKF
                     VVDGLKAKGAIFVEELHEVPDDAIVIFSAHGVSQVVRQEAKNRGLKVFDATCPLVTKV
                     HMQVARASKKGTKAILIGHEGHPEVIGTMGQYNNQEGGIYLVESVEDIANLPVSNNDE
                     LTFMTQTTLSIDDTIGVIEALKEKYPAIQGPRKNDICYATTNRQHAVRELAEQSQLVL
                     VVGSKNSSNSNRLAELASRMGVMSKLIDGPQDIDPTWLEGIETIGITAGASAPEVLVQ
                     SVISHLKTLGVTEVETLVGNEEDVVFEVPKELRIKEVK"
     gene            3856..4104
                     /locus_tag="PXD18_002379"
     CDS             3856..4104
                     /locus_tag="PXD18_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HDL6302756.1"
                     /translation="MTEINRFKLEWACRRGMRELDKMIMPFYQNHFNELNETQQQAFV
                     EMLNYSDPELFRWVMLQAPAPTEEIAELIRLMRDKIET"
     gene            complement(4311..>4837)
                     /locus_tag="PXD18_002380"
     CDS             complement(4311..>4837)
                     /locus_tag="PXD18_002380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL6302757.1"
                     /translation="SNQSANQYIFNSDWFTHNVPSLASIFEYVKPRRILEIGSFEGRS
                     SVFFIEEALKYQSQVEIHCIDSWEGGAEHQGVWDMGEIEQRFIHNVTLAQQKFQNVVL
                     YKHRGYSHQKMIELLANGYINYFDYIYIDGSHEAPDVLFDALLAHRLVRKGGVISFDD
                     YLWSPDETGKQRHY"
BASE COUNT         1524 a          977 c         1046 g         1290 t
ORIGIN      
        1 aaaataaaaa ctctcagcct aataatgctt ctaagtgtaa cagttaatgc tgctccggta
       61 gaactgcacc aattcgacag cccgaaacaa gagtcggact atcgtgcctt aattcaagaa
      121 ctgcgttgcc cgcagtgtca aaataataat atcgccgatt ccaatgcgac tattgccacc
      181 gatatgcggg caaaaacctt agaattgctc aaacaaggca aaagcaaaga cgaagtggtg
      241 gattatatga ttgaacgcta cggcaatttc gtcacttacg acccgcctct cacaccggca
      301 accattatgt tatggctgtt gccgttaatt ttaattgcct tagggctggg ggtggtgttg
      361 cgtagaaaga aaaacaaacc acaagcggtc aattttgagc aaaatactgc aaaaccgacc
      421 actcatctcg ctcaagatga gcaagaacgt cttaaccaaa ttctcaataa ggaagaaaaa
      481 tgaatttctg gctggcaatt attttcgtta cactgattgt atgtggcgtg gcgttttatc
      541 cgttacttaa aaagaacaag caaatcgata acaccaagcg agacagctta aacaaagcct
      601 tctattttga ccgcttaaaa gaagtggaaa acgaagcgaa tgaaggggtg attgatgacc
      661 ctgaacaaac caaattagag ctacaaaaaa acttgcttga tgatattcca cacagcacac
      721 aaagtgccac aagtgaaaaa ttaacgctcg gcaagtcgtg gtttgtggca ttgattttat
      781 ttgtcggcgg tatcagcttt gcgatttaca gcaatgtcgg ttcttggttc tccaactcaa
      841 tgttagacac cactcaccaa aaattagaca gcttctatga gcgtttaaaa accgaagaga
      901 ccaatccgct ctcacaagag gaaatgaacc aatttgcgat ggcattacgg gtagatttac
      961 aaagtaatcc gaatgacgac aaaaaatggt atatgctcgg tcaaatcggg atggcgttag
     1021 atgatggtca gcttgcacac gatgccttta gcaaagcggc tcaactcaag ccggataact
     1081 tagattacaa actcagccac gcccaactgc tgctcttttc cgaagcacag gaagacaaaa
     1141 aacagggtga aaccttgtta aaagagatta tccgccaaga ccacacaaac tttaatgcgt
     1201 taagtttatt ggcgttccac tcctttgaaa aagaagattt caaaatggcg gcaatgacgt
     1261 ggggaatgat gttaaaacta ctgcctgatg aagatcctag caaagtaacg gtagaacgca
     1321 gttttaatat ggcgttatcc aatttaagtg aggcggaaaa acaagaattg caaaaaggtg
     1381 agaaaaaatg accgcttgta aaccacttag caaagagaag ttgaaaatcg gcttggtgtc
     1441 ggtttcagac cgagcctcgc agggggttta ttcagaccaa ggcattcccg aattaagggc
     1501 gtggcttgaa tctgccttaa ccgagccgtt tgagctggaa acccgcttaa ttcccgatga
     1561 gcaagccatt attgagcaaa ccttaatcga gttagtcgat gctcacgctt gccatttggt
     1621 attaaccacc ggcggcaccg gcccggcaaa acgtgatgtc accccagatg ccacccttgc
     1681 tgtcgcccac cgagaaatgc ccggctttgg cgaacagatg cgacaagtga gccttcactt
     1741 cgtgccaacc gccattctct ctcgccaagt gggagtaatt cgccacgaca gtctgatttt
     1801 aaatctgccg gggcaaccga aagcaattaa agaaacgctg gaaggtgtga aagatgaaca
     1861 gggcaaagta ttggttaaag gtatttttag tgccgtgcca tactgtttac aacttttaag
     1921 cgaaatttat gtcgaaaccc acgcagctat ttgcgaaagt ttcagaccca aatcggcaag
     1981 acgagaaaat taaggctaaa aaatgaaaaa aatagaagca attattaaac cttttaaatt
     2041 agacgatgtg cgtgaagcct taaccgatgt gggtgtcagc ggaatgagta ttaccgaaat
     2101 caaagggttt ggcagacaaa aaggacatac cgagctttat cgtggggcgg aatatgcgat
     2161 tgattttcta ccgaaagtga aagtcgaaat cgtgattccc gacgagttgg aagaacagtg
     2221 cattgaagca attatggaaa ccgcccaaac cggcaaaatc ggcgatggca agatttttgt
     2281 gtatgatgtc gggcgggtga tccgcattcg taccggcgaa gaaaatgaag aagcgattta
     2341 gttttgcaaa aaatccggca aaaacgaccg cttgcagggg gatttccatc tactcttttt
     2401 acattaaatt ttggatatta aatgaaaaca ggcttaaaat ttctttgggt gagtttaatt
     2461 gtaatcatca ttgacctttg gtcaaaatac attgtagtgc aacattttga atttggtgaa
     2521 agcattaata ttttgccgat ttttaacttc acttacgccc gaaactacgg ggctgccttt
     2581 agtttccttg ccgaccattc cggctggcaa aaatatttct ttttagggct ggcggtagtg
     2641 atttccagtg ctttagtggt ggctctttgg aagaatcaag cggtcaaaaa attagaaaat
     2701 attgcgtatg ccttaattat tggtggagcg attgggaatg ccattgaccg tgcttacaac
     2761 ggctatgtag ttgatttcct tcatttttat tgggatattt atcactaccc tgtgtttaat
     2821 attgccgata ttgcgatttg tgtgggtgca ggcttactga ttttagaagc ctttataacc
     2881 aaaaaagaac cgaaaaaata agagtgatta aatgaaaatt ttattagcaa acccacgcgg
     2941 tttttgtgcc ggcgtggatc gagccatttc gattgttgaa ttagccttag aaattcacgg
     3001 tgcacctatc tatgttcgcc acgaagtggt acataacaaa tttgtggtgg atggcttgaa
     3061 agccaaaggg gctatttttg ttgaggagct acacgaagtg ccggacgatg ctatcgtgat
     3121 cttctcagcc cacggggtgt cgcaagtagt tcgccaagaa gccaaaaatc gtggcttaaa
     3181 agtgtttgat gccacttgcc cactcgtgac caaagtgcat atgcaggttg cccgagccag
     3241 taaaaaaggg acaaaagcaa ttttaatcgg tcacgaaggt caccctgaag ttatcggcac
     3301 aatgggacaa tacaataacc aagaaggtgg catttatttg gtagaatcgg tggaagatat
     3361 tgccaacttg ccggtttcca acaacgatga attaactttt atgacgcaaa ccacactttc
     3421 cattgacgat accattggcg tgattgaggc gttaaaagag aaatatccgg caattcaagg
     3481 ccctcgcaaa aatgatattt gttatgctac caccaatcgc caacacgcag tgcgggaact
     3541 ggcagaacaa tcacaattag tgttagtggt aggttcaaaa aactcctcga actcaaatcg
     3601 tttggcggaa ctcgcctctc gaatgggtgt gatgtcaaaa ctgattgatg gtccgcaaga
     3661 tattgatcca acttggttgg agggtattga aactatcggt attaccgccg gtgcttccgc
     3721 tcctgaagtg ttggtgcaat cagtaatttc gcatttaaaa acccttggcg taaccgaagt
     3781 tgaaacctta gtcggcaacg aagaagacgt ggtgtttgaa gtcccgaaag agttacgcat
     3841 caaagaggta aaataatgac agaaatcaac cgctttaaat tagaatgggc gtgccgacgt
     3901 ggtatgcgtg agttagacaa aatgattatg ccgttttacc aaaatcattt taatgaactc
     3961 aatgaaaccc aacagcaagc tttcgttgaa atgctcaatt acagcgaccc ggaactgttt
     4021 cgctgggtaa tgctgcaagc acctgcccca accgaagaaa tcgctgaatt gattaggtta
     4081 atgcgagata aaattgagac ctagagctaa tagattaacc tcttctttgg ggtaaatata
     4141 tagctactta ccccaaagaa gactaaattc attcaacttt tacaaaataa ccctaaacta
     4201 gaaaagttaa tcttccaatt taataatatg ttgctgataa gctattaaac cttgtattac
     4261 atgcactttc tgctgatagg tattgacata gtgatcaaca gcgggtttta ctaataatga
     4321 cgctgtttac ctgtctcatc tggtgaccaa aggtaatcat caaaactaat aacgcctcct
     4381 tttctcacta aacgatgtgc aagtaaagca tcgaacaaca catctggcgc ttcgtgagat
     4441 ccatctatgt aaatatagtc aaaataattt atatatccat ttgcgagaag ttcaatcatt
     4501 ttttggtgag aatagccacg gtgcttatat aacacaacat tttggaattt ctgttgcgca
     4561 agagtgacat tatggataaa tcgttgttct atttctccca tgtcccaaac tccttgatgc
     4621 tctgctcccc cttcccaact atcaatacaa tgaatttcaa cttgtgattg atatttcaat
     4681 gcttcttcaa tgaaaaagac agatgatcta ccttcaaatg atccaatttc taaaatcctc
     4741 cgaggtttta catattcaaa aatagaagct aatgaaggaa cattatgagt aaaccaatca
     4801 gagttaaaaa tatattggtt ggctgactgg ttggaat
//
LOCUS       DANLXD010000141         4789 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.142, whole genome shotgun sequence.
ACCESSION   DANLXD010000141 DANLXD010000000
VERSION     DANLXD010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4789)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4789)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4789
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.142"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..561)
                     /locus_tag="PXD18_002381"
     CDS             complement(<1..561)
                     /locus_tag="PXD18_002381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302758.1"
                     /translation="MEGLIMGLQLIPHFPELAISRRTYLHDMPMYCFVSKNWIFSAKD
                     RAKREALGNLLACGGEMMKSFIFKRSLFSEIWFEDILLEDEEKELIRILYNKPEPEYQ
                     VEEKIDWEAREARRKQADYDKWQSYDERNPFHYQIFPTDTIAYAQQQVEKFIEDVDNF
                     LEWFYDDEVKRYILERNEIYQKKFDLV"
     gene            complement(1094..1420)
                     /locus_tag="PXD18_002382"
     CDS             complement(1094..1420)
                     /locus_tag="PXD18_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6302759.1"
                     /translation="MLHSKGKILPKITLNEIETKERFAIALRKEMHAQYWTGKMVANA
                     LDVSEKTVKDWVAGKRLPSSLDLLALMRISSCVRQLVWDISKSEECYQDAEMLKQICF
                     VLLSNL"
     gene            1468..3099
                     /locus_tag="PXD18_002383"
     CDS             1468..3099
                     /locus_tag="PXD18_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDL6302760.1"
                     /translation="MVTRTKNQPKNQAVSYIRMSTEHQEFSPDLQRCFIENYAKENGL
                     EIIREYIDEGKSGLTAEHRPQFLSMIQLVQSGQADFDHILVYDVSRWGRFMNIDESGH
                     YELICTYQGIKVHYCAEPFKGNDIASQIYKTMKRLSVGDYCRELGVKVFNGQKNLIQH
                     GFRQGGVAGFGLRRRLIDCQGNPKFDLQRGDRKSLQTDRVILVAGPKEEQEIVRQIYH
                     DFVYQHKTEQQIADSLNAQGIVTDRNTAWTKGVVHQILINEKYVGHNVWNKRSASKTR
                     EYKGKNPVEEWVRAENVFEAIVPQALFNAAQTIIHQRSARLSDDEMLEQLKLLLKEKG
                     KLSGLIIDEAENCPSSSAYSSRFGSLLNTYTLINYEPERDYHYVEINRLLRQQHKNFV
                     QQTLDTIIELGGVVLSDDVTDLVHINNEFTASIVLSRCRLTPSGSKRWLIRFDTSLNP
                     DITIAVRINESATEILDYYLLPTTEKVNEKLRLAESNPAELEIYRHDNLDRFFIMVER
                     ILVKEFIYAKRHHSNSSYRQNSGTQSQNAQSESLC"
     gene            3014..3907
                     /locus_tag="PXD18_002384"
     CDS             3014..3907
                     /locus_tag="PXD18_002384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HDL6302761.1"
                     /translation="MQNDTIQILPIDKIRVLNPRTRNQKVFADLVENIATIGLKRPIT
                     VTPSVDSAEYYDLLCGQGRLEACQVLGELFIPCRVVNANSEESYLISLVENIARRQHS
                     YMELLSGIKILNDRGYKPVDIARKIGFSKSHVNSILHLINAGEERLINAVEQGILPIT
                     IAISISRSDDQEVQKQLAELYTNGTLKSTDIAKIRNLIHRRNLAGKKANTGISGSIRS
                     SIYNPKTVVNIYKEETERQKMMIKQADYDEKQLSIILSCLNKLFEDKYFQLVLKSEHL
                     DDMPKDLSQRMLKQREGNIYA"
     gene            3900..4763
                     /locus_tag="PXD18_002385"
     CDS             3900..4763
                     /locus_tag="PXD18_002385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HDL6302762.1"
                     /translation="MPKHITYAFHNQLISLPIDEIIPLKKMDKNFEKSTKFQSILASI
                     REIGIVEPVVVYPEENNQYILLDGHSRVHALKKLGVDKVLCMISTDDEGFTYNKQINR
                     LTAVQENKMLMKTIERGVSDELIARTLNINLKALRQKMNMLNGITREVVDILANKQVS
                     KEIFRILRKMKPERQIEVAQMMIASNKFTLTYANMMLLSSRKEELVESHKSKTTNDDL
                     TDLSIMQKELERLKENYKISEEKLADLKMGLVVAKGYVKKLLNNAAVVDLLENDQSEI
                     YLTLKEVCDIQ"
BASE COUNT         1573 a          921 c          930 g         1365 t
ORIGIN      
        1 cactaaatcg aatttctttt ggtaaatctc attcctttct aatatatagc gttttacctc
       61 atcatcgtaa aaccattcaa gaaagttatc aacatcttca atgaactttt ctacctgttg
      121 ctgtgcatat gctatcgtat cggtagggaa gatttgataa tgaaacggat tgcgttcatc
      181 ataactctgc catttgtcat aatcggcttg tttacgccgc gcttctcttg cctcccagtc
      241 gattttttct tccacttgat attctggctc tggcttatta tacaaaatac ggatgagttc
      301 cttttcttca tcctcaagca gaatatcttc aaaccagatt tcagaaaata ggctgcgctt
      361 gaaaatgaaa gacttcatca tttcccctcc acacgccaat aagtttccca atgcttcccg
      421 tttcgctcta tcttttgccg aaaatatcca gtttttcgat acaaaacagt acattggcat
      481 gtcatgcaaa taggttcttc gtgaaatggc taattcagga aaatgaggaa taagctgtaa
      541 ccccattatt aagccttcca tactgcacac gatcttactt aattgtccgt aatcgcgtaa
      601 aaaagcaatg tcagttttta tcaaccacaa cgataggctg actaatatga acataaagat
      661 gagataatag atcggtttta aggctaaggc gcgccgacaa agccacatta agagtggaat
      721 cgtaacgaga tcaaagaaaa atgatgagtc tatgatgatt tccttatgtg agttgatgaa
      781 taatcaggca tgaaggaaac cttaaaaagg aaaagtccct tcattaccac tttttaaaac
      841 cttttaaggc ttaaaaatca aaagtcgtaa tgaagggact attgtccgtg ggcaaaaagg
      901 tattagttat agggggcttt gtcaagcgaa aatttactgt gcattttctc gccaaaactg
      961 atttaagcct tgataaaatc tcgaaagtac cttgtcaaga aaaatctttt tagtggtttg
     1021 attgctagtt ttttgagcaa aactatgctg taatgcagta aaaatacagt ttctatctgt
     1081 gtttggaatc cagttacaaa ttggagagta atacaaagca tatttgcttg agcatctcag
     1141 catcttggta gcattcttct gattttgaaa tatcccaaac aagctgccgt acacatgatg
     1201 aaattctcat taacgccaat aaatctaggc tacttggcaa tcttttccct gcaacccaat
     1261 ctttaactgt tttctcactc acatctaatg cattggcgac cattttcccc gtccaatatt
     1321 gagcatgcat ttcctttcgt aacgcaattg caaaccgctc tttcgtttca atctcattga
     1381 gtgtaatttt gggtaagatt ttaccctttg agtgcaacat atttcctccc gattccttta
     1441 tattggtgta gataaggagt cattagaatg gttacacgta caaagaatca acctaaaaat
     1501 caggcggttt cctacattcg aatgtcaacg gaacaccaag aattttcacc agaccttcaa
     1561 cgttgcttta tcgaaaatta tgctaaagaa aatgggctag aaatcattag agaatacatt
     1621 gatgaaggaa aaagtgggct aaccgcagaa caccgcccac aattcctttc aatgatacaa
     1681 ctcgtacaaa gtggacaagc cgacttcgat catattttgg tgtatgacgt gagtcgttgg
     1741 ggtcggttta tgaatattga tgaatcgggg cattatgaac tgatttgtac ctaccaaggc
     1801 attaaagtcc actattgcgc cgagccattc aaagggaatg atattgcctc tcaaatatat
     1861 aaaaccatga aacgtttgtc ggtaggagac tactgtcgtg aactcggagt gaaagtattt
     1921 aacggtcaaa aaaatctgat ccaacatgga tttagacaag gtggggtagc tggatttgga
     1981 ttgcgtagga gattgattga ctgtcaagga aaccctaaat ttgatctcca acgtggagat
     2041 agaaagagcc tacaaaccga cagagtgatt ttggttgcag gcccaaagga agagcaggaa
     2101 attgtccgac aaatttacca tgattttgtt tatcaacata aaacggaaca acaaattgct
     2161 gatagcttaa atgcacaagg cattgttact gatagaaata cagcatggac gaaaggcgta
     2221 gtacatcaaa tccttattaa cgaaaagtat gtcggccaca atgtttggaa taaacgtagt
     2281 gcatcaaaaa cacgcgaata taaaggtaaa aaccccgtag aagagtgggt gcgagctgag
     2341 aatgtatttg aagctatcgt gccacaagcc ttatttaatg cagcccaaac cattattcat
     2401 caacgctccg cccgattatc tgacgatgaa atgttagagc aactcaagct acttttgaaa
     2461 gagaaaggga agctgtctgg cttgatcatt gatgaagccg aaaattgtcc atcaagtagc
     2521 gcgtacagta gccgatttgg aagcctactt aacacatata ctttaattaa ctatgaaccc
     2581 gaacgggatt accactatgt agagatcaac cgattactcc gtcagcagca taaaaatttc
     2641 gtacaacaaa cacttgatac cattattgaa ttggggggag tggttttgag cgatgatgta
     2701 accgatttag tccacatcaa taatgaattt accgcctcaa tcgtattaag tcgttgtcgc
     2761 ctaacgccat caggaagcaa aagatggttg atccgatttg ataccagttt aaatcccgac
     2821 ataacaattg cagtgcgcat caatgagagt gccacagaaa ttcttgatta ctacctgctt
     2881 cccacaactg aaaaggtaaa tgaaaaacta cgattggctg agagtaatcc tgccgaactt
     2941 gaaatctacc gccatgataa tttagatcgc ttttttatta tggttgaacg tattttagtc
     3001 aaggagttta tctatgcaaa acgacaccat tcaaattctt cctatcgaca aaattcgggt
     3061 actcaatccc agaacgcgca atcagaaagt ctttgctgat ctggtcgaaa acattgcaac
     3121 gattggtctc aagagaccta ttaccgtaac gccatctgtc gatagtgctg aatattatga
     3181 tttgttatgc ggtcaaggtc ggcttgaggc ttgtcaggtg cttggtgagc tattcatacc
     3241 ttgtcgcgtt gtgaacgcaa atagtgaaga aagctacttg atcagccttg tggaaaatat
     3301 tgccagacgt cagcattcct atatggagct gctttcaggc atcaaaatac tcaatgatag
     3361 aggttataag cccgttgata ttgctcgcaa aatcggtttc tcaaaaagcc atgtcaacag
     3421 tatcttacac ctcatcaatg ctggggaaga gcgccttatc aatgcggtag agcaaggaat
     3481 tttacccatt accatcgcta tttcgatttc tcgttcagac gatcaggaag ttcaaaaaca
     3541 actcgcggaa ctttacacca atggtacatt gaaaagcacc gatattgcca aaatacgtaa
     3601 cctgatccac cgtagaaatc ttgctggtaa gaaagccaat acaggtattt ctggaagtat
     3661 tagatcatct atttataatc ccaaaactgt ggtgaatatc tacaaagagg aaacggaaag
     3721 acagaaaatg atgatcaagc aagcggacta tgatgaaaaa caactctcta ttatcttgtc
     3781 ttgcttaaat aaactctttg aggacaaata ctttcaactc gtccttaaat cagaacattt
     3841 agacgatatg ccaaaagatt taagccaacg aatgttaaaa caacgagagg gaaatattta
     3901 tgcctaaaca tattacttat gcctttcata atcagttaat ttcgcttcca attgatgaga
     3961 ttattccatt aaaaaagatg gataaaaatt ttgagaaaag cactaagttc caaagcattc
     4021 tggcttcaat tcgtgaaatc gggattgttg aacctgtggt cgtctatcca gaagaaaaca
     4081 accaatatat tttgttagat ggccattctc gtgtacatgc actcaaaaag ctaggtgtgg
     4141 ataaggtgct ttgtatgatt tctaccgatg atgaaggctt tacttacaac aagcaaatta
     4201 accgcttaac cgccgttcag gaaaataaaa tgctgatgaa aaccattgag cgcggggttt
     4261 cggatgaact gatcgcaaga acactcaata tcaatctaaa agcactacgg cagaaaatga
     4321 atatgcttaa tgggatcaca agagaggttg ttgatatatt ggccaataag caggtcagta
     4381 aagagatatt tcggattttg cgcaagatga agcctgaacg ccaaattgaa gtggcacaaa
     4441 tgatgatcgc cagtaataag tttacattga catacgccaa tatgatgttg ctcagttcac
     4501 gcaaggagga attagtcgaa agccacaagt ctaaaaccac gaatgatgat ttaaccgatc
     4561 tttccattat gcaaaaagag ctagagcgac ttaaagagaa ctataaaatt tccgaagaga
     4621 aattggcgga cttaaaaatg ggattggttg tggcgaaagg gtatgtcaaa aaactattga
     4681 ataatgctgc cgtggtagat ttgcttgaaa atgatcagag tgaaatctat cttactctta
     4741 aagaagtatg tgatattcaa taatataata tctagctaat aaccttaat
//
LOCUS       DANLXD010000142         4768 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.143, whole genome shotgun sequence.
ACCESSION   DANLXD010000142 DANLXD010000000
VERSION     DANLXD010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4768)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4768)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4768
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.143"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            96..425
                     /gene="trxA"
                     /locus_tag="PXD18_002386"
     CDS             96..425
                     /gene="trxA"
                     /locus_tag="PXD18_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018357021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HDL6302763.1"
                     /translation="MSNVIHTTDATFEQDVLKSDVPVLLDFWAPWCGPCRMIGPVLDD
                     LSVDAQFDGKVKIVKMNVDENPSVPAQFGVRSIPFLLLFKNGEVIAQQVGAIPHAQMA
                     EFIKQAL"
     gene            596..1819
                     /gene="hflK"
                     /locus_tag="PXD18_002387"
     CDS             596..1819
                     /gene="hflK"
                     /locus_tag="PXD18_002387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HDL6302764.1"
                     /translation="MSWNESGNQQDPWGKPGQKKAEPKPEQQEQGSQQEPTNNQRNEQ
                     QPPDLEEVFSSLLKKMGGGKGPNNSSNQPSASLGKFLPVVLGLAAVVWVGSGFYTVQE
                     AERGVVTRLGKLNDIVLPGLNWKPTFIDSVTRVNVERVSELNTSGSMLTQDENMVQVE
                     MTVQYRVEDPAKYLFSVSNPDDSLKQATDSALRYVIGHMTMDEILTTGRATVRERTWS
                     TLRDIIKTYDMGLLVTDVNFQYARPPEEVKAAFDDAIKAQEDEQRLIREAEAYARGEE
                     PIARGQAQRTIEQAQAYKEAVVLNAKGEVERLSQLLPEYKASPELTRERLYIQTMEKV
                     MKNTPKVVMDSSGNNLNVLPFDKLMNSSSVIKAEQPAAAQVVTPQVVQPQVQPRTQIQ
                     PQQAEQQEPTRKGRF"
     gene            1822..2709
                     /gene="hflC"
                     /locus_tag="PXD18_002388"
     CDS             1822..2709
                     /gene="hflC"
                     /locus_tag="PXD18_002388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HDL6302765.1"
                     /translation="MRRLLVPILAVVAFVVLQAITIVNEGERGIMLRFNKVHRDSDQK
                     VVVYEPGIHFKVPFIDSLKVLDARIQTLDGQEDRFVTVEKKDLLVDSYVKWRISDFGQ
                     FYTSTGGDYQKAADLLRRKVGDRLRSEIGSRTIKDIVSGSRGELMAGAQKALNAGEDG
                     AERLGIEVVDVRVKQINLPNEVSSSIYQRMRAERDAVAREHRSQGNEKAEVIRAEVDK
                     KVVLILANANKTAQALRGEGDAQAAKLYSEKFGNEPEFYSFIRSLKAYEDSFAEGQNN
                     MMLLKPNSEFLRFMQAPTK"
     gene            2883..4181
                     /gene="purA"
                     /locus_tag="PXD18_002389"
     CDS             2883..4181
                     /gene="purA"
                     /locus_tag="PXD18_002389"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010869263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HDL6302766.1"
                     /translation="MGKSVAILGAQWGDEGKGKIVDLLTDRVKYVVRYQGGHNAGHTL
                     IINGEKTVLRLIPSGILRDNVTCLIGNGVVLSPEALMKEMGELEERGINVRERLKISE
                     ACPLILPYHVAMDHAREAALGKNKIGTTGRGIGPAYEDKVARRGLRVSDLFDKEHFAA
                     KLKDILDYYNFQLVNYYKVEAVDYQKTLDDVFAIADVITGMVADVTTLLHEARENGDN
                     ILFEGAQGTMLDIDHGTYPFVTSSNTTAGGVATGSGYGPRHLDYVLGIIKAYCTRVGS
                     GPFTTELFDDVGAEIARKGNEFGAVTGRPRRCGWFDAVAVRRAVQINSISGFCMTKLD
                     VLDGFKELKICVAYKMPNGKIVEYAPLAAKDWEGVEPIYETMPGWSENTFRVTKREDL
                     PQAALDYIKRIEELVGVPVDILSTGPDRVETMILRDPFAA"
     gene            complement(4341..4411)
                     /locus_tag="PXD18_002390"
     tRNA            complement(4341..4411)
                     /locus_tag="PXD18_002390"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4381..4383),aa:Arg,seq:tct)
     gene            complement(4560..>4768)
                     /locus_tag="PXD18_002391"
     CDS             complement(4560..>4768)
                     /locus_tag="PXD18_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302767.1"
                     /translation="YVVGTGDDTDGEVTNFVIITSEYKYIDAQSAKEITDAPLTKEDI
                     GKTPTQIMLGRIYKYLKETGQIVV"
BASE COUNT         1461 a          859 c         1086 g         1362 t
ORIGIN      
        1 attttataga ttaatctcta tcttatacaa aactgttcgc cttaacttgc cagttagggc
       61 gtttcttttt ttatttaata tttaaggata aacttatgag caatgtcatt catacaacag
      121 atgctacatt tgaacaagat gttttaaaat cagatgtacc ggtattatta gacttctggg
      181 cgccttggtg tggtccttgc cgtatgatcg gccccgtact tgacgattta tctgttgatg
      241 cacaatttga tggtaaagta aaaattgtca aaatgaacgt agatgaaaat ccatctgtac
      301 cagcacaatt tggcgtacgc agcattccat ttttactatt attcaaaaat ggtgaagtga
      361 ttgcccagca agttggtgca attccgcacg cccaaatggc tgaatttatc aaacaagcat
      421 tataatttta agagcaatac tagggcgaat ttatcgccct atttttttgc aaataaatag
      481 tgaaaaaaga ccgcttgttt cagataaacc tagtcaaaag cttactaaat aggtacaatc
      541 actaacttgc attctaagct ttaaagtgcg attcgatttt attttggaga tatttatgtc
      601 gtggaatgaa tcaggcaatc agcaagatcc ttggggtaaa ccggggcaga aaaaagctga
      661 gccaaagcct gagcaacaag aacagggttc acaacaagag ccgaccaata atcaaagaaa
      721 tgaacaacag ccccctgatt tagaagaagt atttagcagt ttattaaaaa aaatgggggg
      781 tggaaaaggg cctaataata gttcaaatca acctagtgca agcttaggga aatttctacc
      841 tgtggtttta ggtcttgcag cagtagtttg ggttggctca ggtttttaca ctgtgcaaga
      901 ggctgaacgt ggtgtggtta ctcgtttagg taagctgaat gatatcgtgt tgccagggtt
      961 gaattggaaa ccgactttta ttgattcggt tacaagagta aacgtagaac gtgtttcaga
     1021 gctgaacacc agtggctcaa tgctgactca agatgaaaat atggtgcagg tagaaatgac
     1081 ggttcagtat cgtgtggaag acccggctaa atatctgttt agtgtgagca accctgatga
     1141 cagcttaaaa caagcaacag acagtgcctt gcgttatgtg attggtcata tgacgatgga
     1201 tgaaatttta accacagggc gtgcaaccgt gcgtgaaaga acgtggtcga cattgcgtga
     1261 tattatcaaa acctatgata tgggtttatt ggtaacagac gtaaacttcc aatatgcacg
     1321 accgcctgaa gaggtgaaag ccgcctttga tgatgcaatc aaagcacaag aagatgagca
     1381 acgcttaatt cgtgaagcgg aagcctatgc aagaggtgaa gagccgattg cacgtggcca
     1441 ggcacagcgt acgattgagc aagctcaagc ttacaaagaa gcagttgtgt taaatgcgaa
     1501 aggggaagtg gagcgtttga gtcaattatt acctgaatat aaagcctctc cagagctgac
     1561 tcgtgaacgt ttatatatcc agacaatgga aaaagtcatg aaaaatacgc cgaaagtggt
     1621 gatggattca agtggtaata atttgaatgt attgcctttc gataagctaa tgaattcttc
     1681 atcggtaata aaagcggagc agcctgcggc ggcacaagta gttacaccac aagttgttca
     1741 gccgcaagta cagccaagaa cacaaattca gccgcaacaa gcagaacaac aagaaccaac
     1801 tcgtaagggg agattttaat catgcgtaga ttattagtac ctatacttgc tgtagttgct
     1861 tttgttgtgc tacaggcaat caccattgta aacgagggcg agcgtggcat tatgttacgt
     1921 tttaacaaag ttcatcgtga tagcgatcaa aaagtggtgg tatatgaacc ggggattcac
     1981 tttaaagtac catttatcga tagtttaaag gtattagatg ctcgtattca aactctagat
     2041 gggcaagaag accgttttgt aacagtcgag aaaaaagatt tattagtgga ctcctatgta
     2101 aaatggcgaa tcagtgattt tggccaattt tatacctcta ctggggggga ttaccaaaaa
     2161 gcggcggatt tattacgccg taaggtaggg gatcgtctgc gttccgagat tggttctcga
     2221 accattaaag atattgtatc cggctctcgt ggtgagttaa tggcaggagc ccaaaaagcg
     2281 ctgaatgccg gtgaagatgg agcagagcgt ttaggaattg aagtggttga tgtgcgagtg
     2341 aagcaaatca acttaccaaa tgaagtttct tcttcaattt accaacgtat gcgtgccgag
     2401 cgtgatgcgg ttgctcgtga acaccgctca caaggtaatg agaaagcaga ggtaattcgt
     2461 gccgaagtgg ataaaaaagt ggtgctgatt ttggcaaatg cgaacaaaac tgcccaagcc
     2521 ttgcgaggtg aaggtgacgc tcaagctgca aaactctatt cagagaaatt tggtaacgag
     2581 ccggaatttt acagttttat tcgtagttta aaagcctatg aagatagctt tgccgaaggt
     2641 caaaataata tgatgttatt aaagccaaac agcgaattct tacgctttat gcaagcaccg
     2701 acaaaataat tgtatctata aaacccgatc ttgtatcggg tttttaattt tcatccctat
     2761 tctgatcata acaagcggta aattttggct gattttttgc aaaaaatttg aaaaaattga
     2821 ccgcttgcga tatgaagtta taatgggttt cgttattcat cctaactaaa agaggcattt
     2881 ctatgggtaa aagtgttgct attcttggcg ctcagtgggg cgatgaggga aaaggcaaaa
     2941 ttgttgattt attaacagat cgtgtgaaat atgtagtacg ttatcaaggt ggacataatg
     3001 cagggcatac cttaatcatt aatggtgaaa aaaccgttct gcgtttaatt ccatcgggta
     3061 ttttgcgtga taacgtgact tgtttaatcg gtaatggtgt agtgctttct ccagaggcat
     3121 taatgaaaga gatgggggag ctagaagaac gaggcattaa tgtgcgtgag cgtttaaaaa
     3181 tttctgaagc ttgcccgtta attctgcctt atcacgttgc gatggatcac gctcgagaag
     3241 cggcacttgg taaaaacaaa attggtacaa caggacgtgg tattggccca gcttatgaag
     3301 ataaagtcgc tcgccgtggt ttacgtgtca gcgatttatt cgacaaagaa cattttgccg
     3361 caaaattaaa agatatttta gattactaca acttccaatt agtcaattat tacaaagttg
     3421 aagcggtaga ttatcaaaaa accttagatg atgtgtttgc gattgcggat gtgattaccg
     3481 gaatggttgc cgatgtgaca actttacttc acgaagcacg tgaaaacggc gacaatattt
     3541 tatttgaagg ggctcaaggc acgatgttag atatcgacca cggtacttac ccgttcgtaa
     3601 ccagctcgaa tacgacagca ggcggtgtgg caaccggatc aggctacggt cctcgtcatt
     3661 tagattatgt attagggatt atcaaagcct actgtacccg tgtaggtagt ggaccgttca
     3721 ccaccgaact atttgacgat gtaggtgctg aaattgctcg caaaggtaat gagttcggag
     3781 cggtaaccgg tcgccctcgc cgttgtggct ggtttgatgc cgtagccgtt cgccgagcag
     3841 tgcaaatcaa ctccatttca ggcttctgta tgactaaact cgatgtttta gacggattca
     3901 aagagctaaa aatctgcgtt gcctacaaaa tgccaaacgg aaaaattgtc gaatatgccc
     3961 ctcttgcagc aaaagactgg gaaggtgttg aaccaattta tgaaacaatg ccgggttggt
     4021 ctgaaaatac tttccgtgtg acaaaacgtg aagatttacc acaagccgca ttagattaca
     4081 ttaaacgtat cgaagagctg gtcggtgtgc cggtagatat tctttctaca ggtccggatc
     4141 gtgtcgaaac gatgattttg cgtgatcctt ttgcagctta ataaaagata aaataaagcc
     4201 atttagtgag atagagctag atggcttttt tgtttgaacc agtaaacttt actttggcac
     4261 aattttgtca caatacagaa aatagttctt tagcgtgagt ttttgaggct gtgtaagtat
     4321 ttgaatttaa aagaatttaa tggcacgccc taaaggattc gaacctttga cccacgcctt
     4381 agaagggcga taggtatttt ataaaaggcg tttattttaa ctaataaaaa caaagactta
     4441 tagagataac ccctctatat tacctaccat tatttcacat ctttttacat taaataacac
     4501 catttacggt acatttatgg aacacgttgg tgatgagcta gtcttcaaaa gttactaaat
     4561 taaactacaa tctgccccgt ctcttttaag tacttataga tacgccctaa cataatctgc
     4621 gttggcgttt tgccaatatc ctcttttgtt agcggtgcat cagtaatctc cttggcggac
     4681 tgtgcatcaa tgtatttgta ctcacttgtg atgattacaa agtttgttac ttctccatcg
     4741 gtatcatcgc ctgtaccgac cacatatt
//
LOCUS       DANLXD010000143         4702 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.144, whole genome shotgun sequence.
ACCESSION   DANLXD010000143 DANLXD010000000
VERSION     DANLXD010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4702
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.144"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            56..1216
                     /locus_tag="PXD18_002392"
     CDS             56..1216
                     /locus_tag="PXD18_002392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HDL6302768.1"
                     /translation="MIEQSYKIALLFNANKIYDRGVMQGIGQFIQASQCTWDIFVEDD
                     FVYHKNSIESLSIDGIIADFDDLETVELLKDIDVPIVAVGGSYQNPDYYPDLPYVATD
                     NYALVEAAFLHLKQKGINQFAFYGYPAETEKHWAIERKNAFIQLMEKYEHHPNCYIGD
                     QFHSDNWVELQAKLGEWLQTLPAHTGIIAVTDARARHLLQTCEHLKIAVPEQLCVIGI
                     DNEELIQYLSRVSLSSVTQGTSQIGYHAAKLLYRKLNNLPVSTKPILIPPVKVEERRS
                     TDYRSLQDPMVIQAMHFIRHRACQGIKVEQVLDHLKISRSNLEQRFKQEMNKTIHQVI
                     HEEKLARATYMLKFTEISTQEIANVCGYPSLQYFYAVFKKEFGKTPKEFRQE"
     gene            1309..2307
                     /gene="gntR"
                     /locus_tag="PXD18_002393"
     CDS             1309..2307
                     /gene="gntR"
                     /locus_tag="PXD18_002393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate operon transcriptional repressor GntR"
                     /protein_id="HDL6302769.1"
                     /translation="MRKPKRPTLQDIATHLGITKMTVSRFLRDPNTVAKETGERIAQA
                     IELFGYIPNRAPDILSNAKSRAIGVLVPSLTNQVFADVIKGIEQITDQASYQTMLAHY
                     GYSEQKEEQRIESLLSYNIDGIILSENHHSPRTLKMLEVANIPVIEIMESGECGIQQA
                     VGFDNISAAQAMVETMIHRGCRQVVYFGARMDKRSQLKMQGYEQAMLKHGLSPHSITT
                     AEHSSFTLGASQLKQALQHIPQLDGIFCTNDDLAIGALFECQRLGIHVPQQIKIAGFH
                     GHDVGQSLTPQLASVITPRLEIGRVAAQELLNRIHGVPQQSSIINLGYQIHLGESV"
     gene            complement(2361..2876)
                     /locus_tag="PXD18_002394"
     CDS             complement(2361..2876)
                     /locus_tag="PXD18_002394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HDL6302770.1"
                     /translation="MANGKAFILMGVSSTGKTSVGTAVAQRLGIKLIDGDDLHPRANI
                     LKMASGTPLNDADRTPWLERINDAVFSFEQKSEKGIIVCSALKKKYRDQIRQGNADVT
                     FLFLHGSFELVLARMQQRKGHFMKPEMLQSQFNTLEIPQADEPDVIFIDIDGSFDEVV
                     ERCVKAVEPLL"
     gene            3063..4412
                     /locus_tag="PXD18_002395"
     CDS             3063..4412
                     /locus_tag="PXD18_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HDL6302771.1"
                     /translation="MLLFIMFAAIILLLVLIMKFKVHAFVALIIVSLLTALAAGIPVD
                     KILPTLLNGFGSTLASVALLVGLGAMIGRLLEITGGAKVLADTLINKFGKERAPFALG
                     VASLLFGFPIFFDAGLVVMLPIIFSVAKQFGGSVLRYAFPSAGAFAVMHAFLPPHPGP
                     VASGDLLGVNMGLLVLVGLVCAIPTWYIGTYLFSQFISKRIHVDLPKAFLNGLSANEM
                     AVQNPPSFGKVLTVLVLPIILILFDTGLNTLSVAKVIDGSEMWVQSLRLIGKTPVALL
                     ITLIVAIMLLRDNRSFDQIEKICNNALGPICSIVLVTGAGGMFGGVLRASGIGDVLSE
                     MMKDTGMPIVVAAFIIATVFRVAQGSATVALTTTAALIAPTVAAATDLSQFDLCFIVI
                     AIASGATVLSHVNDSGFWLMSRFLEMDEKTTLKTWTMLETAIGLTGFACALIGSWLL"
BASE COUNT         1248 a         1054 c         1028 g         1372 t
ORIGIN      
        1 tcaaaaaata attttatttt atagttactt ttgaaagtgg gtactggagg aagtaatgat
       61 agaacaatct tataaaattg ccttactttt taatgctaac aaaatttatg acagaggagt
      121 aatgcagggc attgggcagt ttattcaagc atcacaatgt acttgggata tttttgtgga
      181 agatgatttt gtctatcata aaaatagtat cgaaagcctg tcgattgacg gcattattgc
      241 cgattttgac gatttggaaa cagttgagct acttaaagat attgacgtcc ccattgtagc
      301 agtaggcggt tcttaccaaa accctgacta ttaccctgac cttccttatg ttgctaccga
      361 caattacgcc ttagttgagg cagcattttt acacctaaaa caaaaaggaa tcaaccaatt
      421 tgcgttttac ggctatcctg cagaaacgga aaaacattgg gcgatagagc gaaaaaatgc
      481 ctttattcag ttgatggaaa aatatgaaca tcacccaaat tgttatattg gtgatcaatt
      541 tcattcagat aattgggttg aattacaagc caaattaggc gagtggttac aaaccttacc
      601 agcccacacg ggcattattg ccgttactga cgcaagggca agacacctgc ttcaaacctg
      661 tgagcattta aaaatcgctg tacctgaaca actttgcgtg atcggcattg ataacgaaga
      721 gttgattcaa tacctctctc gggtttctct ttcttcagtc acacaaggaa catcacaaat
      781 cggctatcac gctgcgaagt tattatatcg aaaattaaat aatctaccgg tttcaaccaa
      841 gccgatttta atcccgccgg taaaagtgga agaacgccgt tcgaccgatt atcgttcttt
      901 gcaagaccca atggtaatcc aagctatgca ctttattcgt caccgagctt gccaaggcat
      961 taaagtagag caagtactgg atcatcttaa aatttcccgc tctaaccttg aacagcgttt
     1021 taagcaggaa atgaataaga caattcacca ggtgattcac gaggaaaaat tagcaagagc
     1081 aacatatatg ctcaaattta ccgagatttc gacccaagaa attgccaatg tgtgcggtta
     1141 tccctcttta caatatttct atgccgtgtt taaaaaagag tttggtaaaa ccccgaaaga
     1201 gttcaggcaa gagtagtaac aagcggtcaa tttcaccgaa tattttgcaa ttattgcctt
     1261 atcttcagtt ataatcagcg aaattaaatt ttttcgttat ctattccaat gagaaaaccg
     1321 aaacgcccaa ctttgcaaga catcgctacc catctcggca ttaccaaaat gacggtcagt
     1381 cgctttttgc gggatccaaa caccgttgcc aaggagaccg gcgagcggat tgcacaagcg
     1441 attgagctgt ttggctatat cccaaaccgt gcaccggata ttctctcgaa tgccaaaagc
     1501 cgtgcaattg gcgtgctggt tccttcgctt accaatcaag tgtttgccga tgtgattaaa
     1561 ggcattgagc agattaccga ccaagccagc tatcaaacca tgctcgccca ctatggttac
     1621 agcgaacaaa aggaagagca gcggattgag tcgctgcttt cgtacaatat tgacggcatt
     1681 atcttatcgg aaaatcacca ctcgccccgc accttgaaaa tgctggaagt ggcgaatatt
     1741 ccggtgattg agataatgga aagcggcgaa tgtggcattc aacaagcggt cggatttgac
     1801 aatatttctg cggctcaagc aatggtcgag acaatgattc atcgaggctg ccgacaggtg
     1861 gtgtatttcg gggcgagaat ggataaacgc tctcagctga aaatgcaggg ctacgaacag
     1921 gcaatgctca aacacggctt aagcccacac agcattacta ctgcagagca ttcttctttc
     1981 acgcttggcg caagccagct aaaacaagcc ctgcaacaca ttccgcagct agacggcatt
     2041 ttttgcacca atgacgattt ggcaatcggg gcattatttg agtgccaacg gttaggcatt
     2101 catgtgccgc agcagattaa aatcgccggc tttcacggac acgatgtcgg gcaatccctc
     2161 acgccacagc ttgccagcgt catcacacct cgccttgaaa taggcagagt tgccgcccaa
     2221 gagctgctca accgtattca cggcgtacca caacaaagct ccataattaa cttgggctat
     2281 cagatccatt tgggggaaag tgtgtagccc ggacaagcgg ttaaatttgc aaaaaaatcc
     2341 gcaaaatcca ccacttgtga ttaaagcaac ggctcaactg ctttcacgca acgctccacc
     2401 acctcgtcaa aactgccgtc aatatcaata aatatcacat ctggttcgtc tgcctgcgga
     2461 atttccagcg tattaaattg gctttgaagc atttccggtt tcataaaatg ccctttgcgt
     2521 tgttgcattc gagccagcac cagttcaaac gagccgtgca agaatagaaa agtcacatcg
     2581 gcattgcctt gtcggatctg gtctcggtac tttttcttca atgctgagca gacgataatc
     2641 cctttttcgc ttttttgttc aaaactgaac actgcatcgt taatccgctc caaccacggt
     2701 gtgcgatctg catcattgag tggcgtgcca cttgccattt tcagtatatt ggcacgaggg
     2761 tgtaagtcgt ccccatcaat caattttatt cccaaccgct gtgcgactgc cgttcccacg
     2821 ctggttttgc cggtgctgga cacgcccatc aaaataaatg ctttgccgtt tgccattgaa
     2881 tttccttgtg ttactggtaa cgttaactta gccgttaatg taacaggtta tgctgaaaaa
     2941 tcatctgcta tttccagaaa acttgaagta gatcacattt ttaaaataaa agccctgcaa
     3001 ccgtttactc taaactgctt tttggttatg ttaccgataa caattcaacc ttaggagatc
     3061 ctatgttact gttcattatg tttgctgcca tcattttatt gctggtgctg attatgaaat
     3121 ttaaagtcca cgcttttgtg gcattgatta ttgtgagcct gctcactgca ttagctgccg
     3181 gtattccggt agataaaatc ctgccaacat tgttgaatgg ttttggtagt acgctggcat
     3241 cagtggcgtt actggtgggg cttggggcga tgattggtcg cttgcttgaa atcaccggcg
     3301 gggcgaaagt gcttgcggat acgcttatca ataaattcgg caaagaacgt gcgccttttg
     3361 cgttgggcgt tgcctcgctg ttattcggct tcccgatttt ctttgatgcc ggcttggtgg
     3421 tgatgttacc gattattttt agcgtggcaa aacagttcgg cggttcggtg ttgcgctatg
     3481 cgtttccgtc tgccggtgcg tttgcggtaa tgcacgcctt tctacctccg caccccggcc
     3541 cggttgcctc cggcgatctg cttggtgtga atatggggct gttagtcttg gtgggcttgg
     3601 tttgtgcaat cccaacgtgg tatatcggca cttacctgtt cagccaattt atcagcaaac
     3661 gcattcacgt tgatttgccg aaagcgtttt taaacggctt atcggcaaac gaaatggcag
     3721 tacaaaaccc gccaagtttt ggcaaggtac tcacggtgtt ggtgctgccg attatcctga
     3781 ttttgtttga taccggcttg aataccctct ccgttgctaa agtgattgat ggcagtgaaa
     3841 tgtgggtgca gagccttcgc ttaatcggca aaacccctgt tgctttactg attaccttaa
     3901 ttgtggcgat tatgctgttg cgggataatc gcagtttcga ccaaatcgaa aaaatctgta
     3961 acaatgccct tggcccaatc tgctcgattg tcttagtaac cggtgcaggc ggaatgtttg
     4021 gtggcgtgtt gcgtgccagc gggattggcg atgtattatc ggaaatgatg aaagacaccg
     4081 gaatgccgat tgtggttgcc gcctttatta ttgctacggt attccgtgtc gcacaaggct
     4141 cggcaaccgt tgctttaacc accacagcag cgttgattgc gccaactgtg gcggcagcga
     4201 ctgatttaag ccagttcgac ctctgtttta tcgtgattgc tatcgcctcc ggtgcgacgg
     4261 tgctttccca cgtcaatgac tccggtttct ggctgatgag ccgtttcctt gaaatggacg
     4321 aaaaaactac cctcaaaacg tggacaatgc ttgaaactgc catcggttta accggttttg
     4381 cctgtgcatt gattggcagc tggttactct aattccaacc ctgacaagcg gtctgttttc
     4441 ttctaaaatt tgcaaaattt ggcagagaat cgaccgcttt ttcttattat agaatgttag
     4501 ggtttattta atatatcttc atttataaac tgaatatttt gtaaattatt ccaaaacctt
     4561 tctgctgcat tatttagtct cgtattcatt ctgtaaatat aactttttat tggaataact
     4621 aattcatttt tgtctagtat gattactttt ttattgtgta attcttcact aatagaatat
     4681 tcagggagcc atgcaatgcc tt
//
LOCUS       DANLXD010000144         4672 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.145, whole genome shotgun sequence.
ACCESSION   DANLXD010000144 DANLXD010000000
VERSION     DANLXD010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4672)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4672)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4672
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.145"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            197..4093
                     /gene="purL"
                     /locus_tag="PXD18_002396"
                     /gene_synonym="purI"
     CDS             197..4093
                     /gene="purL"
                     /locus_tag="PXD18_002396"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HDL6302772.1"
                     /translation="MTIQTFRGSPALSAFRIQQLLQKFQQNQLPVKSVYAEFLHFVAL
                     NRPLVADEENKIKELLHYGPTLEEDEPTGFCLIVTPRIGTISSWSSKATDIAHNCGLA
                     AVERIERGTAYYLEFSETPNESQLTTLKGLLHDRMMETVLDNESQAEQLFAQQEPKPF
                     TSVDILGGGRKALEEANINLGLALADDEIDYLVENFTQLGRNPNDIELYMFAQANSEH
                     CRHKIFNADWTIDGVKQEKSLFKMIKNTFEKTPDYVLSAYKDNAAVMEGSTVGRFFPD
                     QDGQYRYHQEDAHILMKVETHNHPTAISPFPGAATGSGGEIRDEGATGRGAKPKAGLT
                     GFSVSNLVIPKFEQPWENPLSKPNRIASALDIMIDGPLGGAAFNNEFGRPALLGYFRT
                     YEEKVNSFAGEEIRGYHKPIMLAGGIGNIRAEHVQKGEIPVGAKLIVLGGPAMNIGLG
                     GGAASSMASGKSKEDLDFASVQRENPEMERRCQEVIDRCWQMGAENPILFIHDVGAGG
                     LSNAMPELVHDGECGGKFDLRNILCDEKGMSPLEIWCNESQERYVLAVSPEKLDIFTA
                     LCERERAPFAVIGEATKEKHLTLADPHFDNKPIDLPMNVLLGKTPKMQRDVLSKTVKN
                     PPLATADIDLKEAFHRVLRLPAVAEKTFLITIGDRSVTGMVAQDQMVGPWQIPVADCA
                     VTTASLDSYHGEAMSIGERSPVALLDFAASARLAVAESITNIAATNIGDIKRIKLSAN
                     WMSAAGHEGEDAGLYEAVKAVGEELCPELGITIPVGKDSMSMKTTWEENGEQKSVTAP
                     LSLVISAFARVEDVRKTVTPQLRTDKGDTRLLLIDLGEGNNRLGATALAQVYKQLGDK
                     PADVVNVARLKGFFNAMQTLVAQGKLLAYHDRSDGGLITTLAEMAFAGNCGISVEIDR
                     LVDDLAVLFNEELGAVIQVRTEELSEVQAVLNAENLANLTFDIGTAVESDSFEITRNG
                     TTVFSQKRSELRGIWAELTHQMQRLRDNPECADQEFAAKKDPNNKGLSAFLTYDVNED
                     IAAPYINKGVKPSVAILREQGVNSHYEMAAVFDRAGFNAIDVHMSDLISGRRNLNDFN
                     AMVACGGFSYGDVLGAGGGWAKSILFNPMLRDQFSKFFANPNTLALGVCNGCQMVSNL
                     AEIIPGTENWPRFVRNKSERFEARAAMVKINDTNSLWFNGMAGSHMPIAVSHGEGQVE
                     FKNPQQLANLQQQNLVIAQYVDSHLNPTEQYPANPNGSALGITAIGNTDGRVAIMMPH
                     PERVFRAVSNSWCPEDWTEGGAWMRLFRNARVALKY"
     gene            4448..4630
                     /locus_tag="PXD18_002397"
                     /pseudo
     CDS             4448..4630
                     /locus_tag="PXD18_002397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         1312 a         1047 c         1138 g         1175 t
ORIGIN      
        1 cttattttta aattatcttt taaaacagat tgatagaggg gaccttcttt gaaaggtatt
       61 cattagtatt gaacaaattt atttgatact aatgaataaa tgtatctaac agcaaacgtc
      121 tgacaaatat agcaatcgtt tgcgcaatcg tttataatcg gtttagtttt tcatcttaaa
      181 taggaaaatc caaagaatga caatccaaac cttccgtggc tcgcctgcct tatctgcttt
      241 tcgcattcaa caacttctgc aaaaattcca acaaaatcaa ttacctgtaa aatcagttta
      301 tgcggagttt ttgcattttg tggcattaaa tcgaccgctt gtagccgatg aagaaaacaa
      361 aatcaaagag ttattgcact acggtccaac gctggaagaa gacgagccga cagggttttg
      421 cctgattgtt acccctcgta tcggcacgat ttcctcgtgg tcgtctaagg caaccgacat
      481 cgcccataac tgcggtttgg cagcagtaga gcgaattgag cgtggcacgg catattattt
      541 agaattttct gaaacgccga acgaaagtca acttacgacg ttgaaaggct tattacacga
      601 ccgtatgatg gaaacggtgc tggataacga aagccaagcc gaacagcttt tcgctcagca
      661 agagccgaag ccgtttactt cggtggatat tttaggcggt ggtcgcaagg cactggaaga
      721 agcgaatatc aacttaggtt tagcgttggc ggacgatgaa attgattact tggtggaaaa
      781 ctttacccaa cttgggcgta accccaatga tattgaactc tatatgttcg cccaagccaa
      841 ctcggagcat tgccgccaca aaatttttaa tgcggattgg acgattgatg gggtaaaaca
      901 ggaaaaatcc ctgtttaaga tgattaaaaa cacctttgag aaaaccccgg actatgtgct
      961 ttccgcctac aaagacaatg cggcggtgat ggagggctca acggttgggc gtttcttccc
     1021 cgaccaagat ggacaatatc gctatcatca agaagatgct catattttaa tgaaagtaga
     1081 aactcacaac cacccaaccg ccatctcgcc attcccggga gcggcgaccg gttcgggcgg
     1141 tgaaattcgt gatgaagggg cgacagggcg tggggcgaaa ccgaaagcgg gcttgacggg
     1201 tttttcggtc tctaacttag tgatcccaaa atttgaacag ccgtgggaaa acccgctttc
     1261 caagccgaat cgcattgcct ccgcactgga tattatgatt gatggcccac taggcggagc
     1321 ggcatttaac aatgaatttg gtcgtcctgc gttattgggc tacttccgta cttacgaaga
     1381 aaaagtgaac agcttcgcag gcgaagaaat tcgtggctat cacaagccga ttatgttagc
     1441 aggcggtatc ggcaacattc gtgccgaaca cgttcaaaaa ggcgaaatcc cggtgggagc
     1501 gaagttgatc gtgcttggtg gcccggcaat gaacatcggc ttaggcggtg gggcggcatc
     1561 gtcaatggca tcggggaaat cgaaagaaga tttggatttt gcctcggttc agcgggaaaa
     1621 ccctgaaatg gaacgccgtt gccaagaggt gatcgaccgt tgctggcaga tgggggcgga
     1681 gaacccaatt ttatttattc acgacgtggg ggctggcggt ttatcaaatg cgatgcctga
     1741 attggttcac gacggcgaat gtggcggtaa gtttgatttg cgtaacatct tgtgcgatga
     1801 aaaaggaatg tcgccacttg aaatttggtg taacgaatcg caagagcgtt atgtgcttgc
     1861 cgtttcccct gaaaaactcg acattttcac agcattgtgc gaaagggaaa gagccccatt
     1921 tgcggtgatt ggcgaggcaa cgaaagagaa gcatttaacc cttgctgacc ctcattttga
     1981 caataaaccg attgatttgc cgatgaatgt gttgctcggc aaaacgccaa aaatgcagcg
     2041 agatgttttg tcaaaaactg tgaaaaatcc accgcttgca accgctgaca tcgacttgaa
     2101 agaggcgttc caccgtgtgc tacgcttgcc tgcggtggct gaaaaaacct tcctgattac
     2161 catcggcgat cgctcagtaa cgggaatggt ggcacaagat cagatggtcg gcccgtggca
     2221 aattcctgtg gcagattgtg ccgtaaccac cgcttcatta gacagctatc acggtgaagc
     2281 aatgtcaatt ggcgagcgat cacctgttgc tttgcttgac tttgctgcct cagctcgcct
     2341 cgccgtggca gaaagcatca ccaatattgc cgccactaac attggcgaca tcaaacgcat
     2401 taaactctcg gcgaattgga tgtcggcggc agggcacgag ggcgaagacg cagggcttta
     2461 cgaggcagta aaagcggtgg gcgaagagct ttgccctgaa ttaggcataa ccattccggt
     2521 aggcaaagac tcaatgtcga tgaaaaccac ttgggaggaa aacggcgaac agaaatctgt
     2581 tactgctccg ctttcgctcg tgatttccgc tttcgctcgt gtggaagatg tgcgtaaaac
     2641 cgttacccca caacttcgca ccgacaaagg cgatacccgc ttgttgctga tcgacctggg
     2701 cgaaggcaac aaccgcttgg gtgcaaccgc acttgctcaa gtttacaaac aacttggcga
     2761 caaacctgcc gatgtggtga atgtggctcg cttaaaaggc ttcttcaacg caatgcaaac
     2821 ccttgtcgca caaggaaaat tgcttgccta ccacgaccgc tcggacggtg gtttaatcac
     2881 cacactggcg gaaatggcgt ttgcagggaa ttgcggaatt tcggtggaaa tcgaccgctt
     2941 ggtggacgat ttagccgtgt tattcaacga agaactgggg gcagtaatcc aagttcgcac
     3001 cgaagaattg agcgaggtgc aagcggtgtt aaatgccgaa aatcttgcaa atctcacctt
     3061 tgatattggt acagcggttg aaagcgacag ctttgaaatt acccgcaacg gcacaacagt
     3121 atttagccaa aaacgttccg aactgcgtgg catttgggcg gaactcactc atcaaatgca
     3181 gcgtttgcga gacaaccctg aatgtgcaga ccaagaattt gcagcgaaaa aagacccgaa
     3241 taacaaaggc ttatccgcat ttttaactta cgatgtgaac gaagacatcg ccgccccata
     3301 catcaacaaa ggcgtaaaac cgagtgtggc gattttgcgt gagcaaggtg taaacagcca
     3361 ctacgaaatg gcagccgtct ttgaccgtgc cggtttcaac gccattgacg tgcatatgtc
     3421 agacttgatt tcaggcagac gcaacctcaa cgacttcaac gcaatggtgg cgtgcggagg
     3481 cttctcttac ggcgatgtct taggtgcagg cggcggctgg gcgaaatcga ttctgttcaa
     3541 cccaatgctg cgtgaccaat tcagcaaatt cttcgccaac ccgaacacgc tggcattagg
     3601 ggtatgtaat ggttgccaaa tggtctccaa tctagcggaa attattccag gcacagaaaa
     3661 ctggccacgc ttcgtgcgta ataaatccga acgttttgaa gcccgtgctg caatggtgaa
     3721 aatcaacgac accaactcac tttggttcaa cggaatggca ggcagccata tgccgattgc
     3781 ggtttcacac ggtgaaggac aagttgagtt caaaaatcca cagcaattag cgaacttgca
     3841 acagcaaaat ctcgtgatcg cacaatatgt ggatagccac ctcaacccaa ccgaacaata
     3901 cccagccaac ccgaacggat cggcgttggg tatcaccgct atcggtaata cagacggacg
     3961 agtcgctatt atgatgccac accctgaacg tgtgttccgt gcggtcagta actcttggtg
     4021 cccagaagat tggacggaag gtggagcgtg gatgcggttg tttagaaatg cgagagtggc
     4081 gttgaagtat taaaaatcta ccttcgtagt gatctgcccc catagggggc gattaaaatt
     4141 cgaattcata gaacccgaat ttttatatat ctgataaacg aagttgttta tccttcgtgc
     4201 ttttcctgat atttcaagta ctttcttatc atttctgcat tgacatctac ggtgtctacg
     4261 cagtagcctc ttgccacaaa agtgggttgc cccacaattt atgcttacgt aaatagggaa
     4321 acttattgaa aaatcttatt ggaccctgtt caccctttta aatgccccat tacgtcttat
     4381 acagaaaatg aacgtgattt atttgaacgg tcaattctac cttaatagaa agtggttttt
     4441 agttagcaat caaaatcaca ttaacggaat tgagaatttg gagagtcagg caaaatgcta
     4501 tttgcgtaaa tttaacggcg ttcctaaagt acatgaattc tatttgaaag aatgcagatg
     4561 gcgttttaat cacagtaact taaaatatca agttttcttt ttaaaacaat tggttaaatt
     4621 gagtttctag gatagcccct tatttttata atcctctatt taagtgcata tt
//
LOCUS       DANLXD010000145         4523 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.146, whole genome shotgun sequence.
ACCESSION   DANLXD010000145 DANLXD010000000
VERSION     DANLXD010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4523)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4523)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4523
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.146"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            9..2099
                     /locus_tag="PXD18_002398"
     CDS             9..2099
                     /locus_tag="PXD18_002398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HDL6302773.1"
                     /translation="MLSYVVLFSKIIKIPNLNGFLPNCEIIRKPLVGKNFIANNKPDQ
                     VIGWGLRPLARKAKAYAEKHQLPYIALEDGFLRSLGLGVKGYPPFSLVYDDVGIYYDT
                     TCPSRLEKFLLEQPLQDQEQIKLAEKALSQILTYQLSKYNHALDFSEIPSIKEKIVLV
                     IDQTFGDMAVKYGQASEVDFNKMLETAISENPEAQIWVKTHPDVLSGKKKGYLTDLPQ
                     YADRVRIITEDVNPASLIKWCEKVYCVTSQMGFEALLLGKKVVTFGVSWFAGWGVTDD
                     RHSSVQLLIQQKRRQARSLLQLFYAAYFDYSRYINPNTGEKGSIFDVIEYLHKATILN
                     RRLSGNVYCIGMSLWKQAVIKPFFNLPQCRLHFVRSLNSLKKRPLAENAKILVWSNGK
                     PEIIQFAKENHIPLLRMEDGFIRSVGLGANLVAPLSLVVDDLGIYFNAENPSRLEQIL
                     LEAEDFSENDLSYAEALRQKLVATHIGKYNVGSGEVQVNAQGKKIILVPGQVEDDASI
                     KSGSPQIKRNLDLLKKVRELNPSAYIIYKPHPDVVSGNRVGQIPTAETRRFADQMVDN
                     ANILDCILIADEVHTMTSLAGFEALLRGKKVHCYGLPFYAGWGLTEDRLKSARRGKSL
                     TLSQLIAATLIYYPLYVDPISRQFIDANQAIHILSQQKRNLTNQRVKRSWVSKQYGKL
                     QHLYRAFKYASHTK"
     gene            2122..3354
                     /locus_tag="PXD18_002399"
     CDS             2122..3354
                     /locus_tag="PXD18_002399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDL6302774.1"
                     /translation="MEHYLDELIINSQRILLLQGPIGSFFTEFACWLESEQKEVFKLN
                     FNGGDEYFYPNNSPNTFPYYDSLDNFEAYLIQFCQTHQIDNILCFGDNRYYHKVAKNV
                     CLKLKLVFWAFEEGYFRPEYITLEKWGVNAFSPIPKNHTFFLPYAELPVVSEPEKVSK
                     GFRCMAGKAISYYWNAYKKRKAYAKYQHHRFLNLKYYLNLWTRSGIKRICYWLHDKGF
                     AKRVEKGEFGEFFIVPLQVYDDTQVRIHSEQKSVERFLREVLNSFAKFAPAHLNLIIK
                     HHPMDRGFIDYKMVIYEFLEQYPQLNGRVFYIHDVPLPVFLRYGKGMVTLNSTSGLSA
                     LLHNMPVKTLGRANYDFEGLTDKQPLDTFWANPQPPNSEVFKGYRQFHLHKTHINGNF
                     YHKSILRYPYNWENEAHR"
     gene            3435..4496
                     /locus_tag="PXD18_002400"
     CDS             3435..4496
                     /locus_tag="PXD18_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL6302775.1"
                     /translation="MAIYAIWNNKGGVGKSYLTFQIACEYAKQYPAKKVLVVDLCPQA
                     NSSSMLLGGIEKGEQELAKIHSQVNKNTISGYISERLVSPYRSINSATKYVTQVSTIN
                     EYVPKNVYLVVGDEELEIQSSGILHASQAVHVPDSWRLVHLWVRDLVSDIQNAWDNDD
                     NVVFIDCNPSFTIYTELALAASDRLIIPFSADGSSKRAVKSVLSLVYGVKRHSGDVSS
                     HFYTESQKSKLALPQIYMYVGNRLTINAKASATAFKTVVEEIGDEIYNVWKTNANLFC
                     IHPAGVCTPTNKSSFRKMFQYEVRDANTAPVVSGALGIPISRLSSGKRDVLGKNVMVN
                     QSQLDAQVPNIQNLVQCIE"
BASE COUNT         1443 a          701 c          928 g         1451 t
ORIGIN      
        1 tggtttttat gcttagctat gtagttttgt ttagtaaaat tataaaaata cctaatttaa
       61 atgggttttt acctaattgt gaaattattc gaaaacctct tgtgggaaaa aattttattg
      121 ctaacaataa acctgatcaa gttattggct gggggcttcg tcctttagct agaaaagcaa
      181 aagcctatgc cgaaaaacac caacttcctt atattgcatt agaagacggc tttttacgct
      241 cattaggctt gggtgtaaaa ggctatccgc ctttttctct agtgtacgac gatgtcggga
      301 tttattacga tactacttgt ccttcccgtt tagaaaaatt cctgcttgaa caacctttgc
      361 aggatcaaga gcaaattaag cttgcagaga aagctttatc tcaaatctta acttatcagc
      421 tttctaaata taatcacgca ttagatttta gtgaaatccc ctctatcaaa gaaaaaatcg
      481 tattagttat tgaccaaacc tttggtgata tggcggtgaa atatggccaa gcgagtgaag
      541 tggatttcaa taaaatgttg gaaacggcaa tcagtgagaa tccagaggct cagatttggg
      601 tgaaaactca ccccgatgta ttaagtggca agaagaaagg ctatttgacc gatttgcctc
      661 aatatgctga tagagttcgt attattactg aagatgttaa tccggcaagc ttgattaaat
      721 ggtgtgagaa agtctattgc gtaacttcgc aaatgggctt tgaggcatta ttgttaggta
      781 aaaaagtggt tacctttggt gtgtcgtggt ttgccggttg gggggtaaca gatgatcggc
      841 atagctcagt tcaattatta atccaacaga agagacggca agcacgctca ttgttacaac
      901 tattttatgc agcatatttt gattacagtc gttatattaa tccgaatacg ggtgaaaaag
      961 gctctatttt tgatgtgatt gagtatctgc acaaggcgac aatactcaac cggcgtttaa
     1021 gcggaaatgt atattgtata ggtatgtcat tatggaaaca ggctgtcatt aagccgtttt
     1081 ttaatttgcc tcaatgccgt ttacattttg tgcgttcgct aaattctttg aaaaaacgac
     1141 cgcttgcaga gaatgctaaa attttagtgt ggagtaatgg taagcctgaa attatacaat
     1201 ttgcgaaaga aaatcatatt ccactgttga gaatggaaga tggttttatt cgttcggttg
     1261 gacttggggc aaatttagtt gcgccacttt ctttggtagt agatgattta ggtatttatt
     1321 ttaatgcaga gaatccttcc cgtttggaac aaattttatt ggaagcggag gatttttctg
     1381 aaaatgattt gtcttatgct gaggcattaa gacaaaaatt agtggccacc catattggta
     1441 aatataatgt cggtagtggt gaggtgcagg ttaatgccca aggcaaaaaa ataattttag
     1501 taccggggca ggttgaagat gacgcttcga taaagtccgg ttctccacaa attaaaagaa
     1561 atctggattt actgaaaaaa gtgagggaat taaaccctag tgcctatatt atttataagc
     1621 ctcaccctga tgtggtaagt ggtaatcgag tcggtcagat tcctacggca gaaacacgca
     1681 ggtttgcgga tcagatggtg gataatgcca atattttaga ttgtatttta attgcagatg
     1741 aagtgcatac aatgacatct ttagccggtt tcgaagcatt attaagaggt aaaaaagtgc
     1801 attgctacgg attacctttt tatgctggtt ggggattgac ggaagataga ttgaagtcgg
     1861 cacgcagagg taaatctttg acattatctc agttaattgc cgcaacattg atatattacc
     1921 ctctgtatgt tgatcctata agcaggcagt ttattgatgc caatcaagcg attcatatat
     1981 tgtcacaaca gaaacgaaac ctaaccaatc aaagggttaa acgttcttgg gtgagtaaac
     2041 aatatggaaa attacagcat ctttatcgtg cgtttaaata tgcttcccac actaaataag
     2101 cgtagagggt aggaaattaa gatggaacat tatttagatg agctaatcat caatagccag
     2161 agaattttat tgttacaagg cccgataggc tcttttttca ctgagtttgc ctgttggtta
     2221 gaaagtgagc aaaaagaggt cttcaagtta aattttaatg gcggagatga atatttctat
     2281 ccaaataata gcccgaatac ttttccttac tatgatagct tagataattt tgaagcctat
     2341 ttaattcagt tttgccaaac tcatcaaata gataatatct tatgttttgg cgataatcgt
     2401 tattatcata aagtggctaa aaacgtttgc ttgaagttaa agttggtctt ttgggcgttt
     2461 gaagaagggt actttaggcc agaatatatt acgttggaaa aatggggtgt aaatgctttt
     2521 tctccaatcc cgaaaaatca cactttcttt ttgccttatg ccgagttacc agtagtcagt
     2581 gaaccagaaa aagtatctaa aggctttaga tgtatggcgg gaaaagcaat ctcgtactat
     2641 tggaatgcct ataaaaaacg taaagcatac gcaaaatatc agcatcatcg ttttctgaat
     2701 ctcaaatact accttaattt atggacaagg tcgggaatta agcgaatatg ttattggtta
     2761 catgataaag gatttgccaa gcgggtagaa aaaggagagt ttggtgaatt tttcattgtg
     2821 cctctacaag tttatgatga cactcaagtg aggattcata gtgaacaaaa aagtgtagag
     2881 cgttttttaa gggaagtgct gaattccttt gccaaatttg caccggcaca tctcaattta
     2941 attattaagc atcacccgat ggatagagga tttatagatt ataaaatggt gatttatgaa
     3001 ttcttagagc aatatcccca attaaacggt agagtttttt atattcacga tgtgccgtta
     3061 cctgtctttt tacgttatgg gaaaggaatg gtgactttaa attcaaccag tgggctttct
     3121 gcattgctcc ataatatgcc ggtcaaaacc ttaggtagag ccaattatga ttttgaggga
     3181 ttaaccgata aacagccatt agatactttt tgggctaatc ctcagccacc taattcggaa
     3241 gtatttaaag gctacagaca atttcattta cataaaacgc atattaacgg taatttttac
     3301 cataaatcga ttttgcgtta tccttataat tgggaaaatg aagcacacag gtgatggaaa
     3361 atattaaaat aagtaatatc ttatagctaa attattgtgt tattattaca cctattgtta
     3421 aaagaggggg cattatggct atttatgcaa tatggaataa taaaggtggg gttggtaaaa
     3481 gttatttaac ttttcaaatc gcttgtgagt atgcaaaaca atacccagca aaaaaagttc
     3541 tcgttgttga tttatgtcct caagcaaatt catcatctat gctattaggc ggcattgaaa
     3601 aaggtgagca agagttagca aaaattcatt ctcaagtaaa caagaatact atttcaggat
     3661 atatttcaga aagattagta agtccttacc gttctattaa tagtgcaacg aaatatgtaa
     3721 ctcaagttag cactataaat gaatatgtac caaaaaatgt ttatcttgtt gttggtgatg
     3781 aggaattaga aatccaatca tctggtattt tacatgcttc ccaagctgtt catgttcctg
     3841 attcttggcg gctagtgcat ctttgggtgc gtgatttagt ttctgatata cagaacgctt
     3901 gggataatga tgataacgtt gtatttattg attgcaatcc aagtttcact atttatactg
     3961 aattagcgtt ggctgcttca gatagattga tcatcccttt ttccgctgat ggttcatcaa
     4021 aacgagctgt taagtctgta ttatctctag tatatggggt taaaaggcac tctggggatg
     4081 tcagctctca tttttataca gaatctcaaa agagtaagtt agcattacct caaatttata
     4141 tgtatgtagg taatagatta acgataaatg ccaaagcatc agcaaccgca tttaaaacag
     4201 ttgtagagga aataggtgat gaaatctata atgtatggaa aactaatgct aatttgttct
     4261 gtattcaccc agcaggtgtt tgtactccta caaataaatc aagcttcaga aaaatgtttc
     4321 agtatgaggt gagagatgca aatacagcac ctgttgtttc aggtgcttta ggtattccaa
     4381 ttagtcgctt atcatcagga aaaagagatg ttttaggtaa aaatgtaatg gtgaatcagt
     4441 cacaattaga tgctcaagtt cctaacattc aaaatcttgt tcagtgtata gaataaagaa
     4501 aaatagcgta tattaagtac gct
//
LOCUS       DANLXD010000146         4327 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.147, whole genome shotgun sequence.
ACCESSION   DANLXD010000146 DANLXD010000000
VERSION     DANLXD010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4327
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.147"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            107..1315
                     /locus_tag="PXD18_002401"
     CDS             107..1315
                     /locus_tag="PXD18_002401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HDL6302776.1"
                     /translation="MSKNLILILNCGSSSLKFAILDPKTGDEKLSGLAEAFHLEDARI
                     KWKLNGEKGNADLGAGAAHSEALTFIAEKLLSDELKAGIGAIGHRIVHGGEKFTSSVV
                     ITDEVIKGIEDATQFAPLHNPAHLIGIKEAFRIFPELKDKNVAVFDTAFHQTMPEHAF
                     LYALPYTFYKENGIRRYGFHGTSHFYITSQVAELAGKSVEQTNAIICHLGNGGSVSVV
                     RNGKCIDTSMGLTPLEGLVMGTRSGDLDPAIISFLYNNLGMSMDEIDTTLVKKSGLLG
                     LTGVTSDCRYAEDNYNDVSKPEAKRALDVYSYRLAKYIGSYMAILGDDHLDAIAFTGG
                     IGENSGLVRELTLNHLKLFGIKLDQERNLAARFGKDGVITADESTFKAVVIPTNEELV
                     IAQDTAKLAL"
     gene            1368..3503
                     /gene="pta"
                     /locus_tag="PXD18_002402"
     CDS             1368..3503
                     /gene="pta"
                     /locus_tag="PXD18_002402"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005542370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HDL6302777.1"
                     /translation="MSRTIILIPISTGVGLTSVSLGLVHALEQKGSKVGFLKPISQPI
                     SGEDTLDRSTTIIRAEQTTEVGEPFMLSEAETLIGQNQTDVLLEKVVERHQKLSKNNE
                     IVIVEGLIPTRKNSYANSINYEMAQALDAEIVLVAAPASDTPAQLKERVEAAASQFGG
                     RNNPNLLGVIINKFNAPVDDSGRTRPDLTEIFDSFQHSNNNVSEVEHLFAKSPIKLLG
                     CISWKAELIATRAIDVAKHLGASIINEGEIKARRIRGVTFCARNLPNMVDHFKAGSLL
                     VTSADRPEVLVAASLAVMNGIEIGAILLTGGYKIDSSIAKLCQQAFETGVPVFRIEGN
                     TWQTALSLQSFSLEVPVDDKERIAAIKEYMASKFNVGFIDEVSKAATRARRLSPAAFR
                     YQLTEYARQAKKRIVLPEGDEPRTVKAAALCAERGIAECVLLANPTDVQRVAEAQGVV
                     LGKGVTIIDPASIRENYVDRLVELRKAKGMTEVVAREQLLDTVVLGTMMLEANEVDGL
                     VSGAVHTTANTIRPPMQIIKTAPGSSIVSSIFFMLLPDQVLVYGDCAVNPDPTAEQLA
                     EIAIQSAESAKAFGIDPRVAMISYSTGTSGSGADVEKVKEATRIAQEKRPDLIIDGPL
                     QYDAAIMEDVARSKAPNSPVAGKATVFVFPDLNTGNTTYKAVQRSADLVSIGPMLQGM
                     RKPVNDLSRGALVDDIVYTIALTAIQATQ"
     gene            3617..4297
                     /gene="can"
                     /locus_tag="PXD18_002403"
     CDS             3617..4297
                     /gene="can"
                     /locus_tag="PXD18_002403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HDL6302778.1"
                     /translation="MEKIERLFANNHAWATKMKDEQSDYFKELAEHQKPTYLWIGCSD
                     SRVPAEKLTGLGPGELFVHRNVANMVIHTDLNCLSVVQYAVDVLEIEHIIICGHTNCG
                     GINAAIAQKELGLINNWLLHIRDIWFKHSHLLGKLPYEERSNVLTRLNVAEQVYNLGQ
                     SSIIKTAWEQGKSLSLHGWVYDVTDGFLIDQGVMATSRETLEITYRNAIAKITTEANE
                     KIVLNDEN"
BASE COUNT         1357 a          802 c          877 g         1291 t
ORIGIN      
        1 caagcattta ttttaagatc tgaaaggtgt atcctttaca ccttaaatac accaataaaa
       61 atagtatttt cttcaaactc atttcataaa ataaggtaat ttgaccatgt ctaaaaactt
      121 aatcttaatc cttaactgcg gtagttcatc tcttaaattt gctattttag atcctaaaac
      181 aggtgatgaa aaattatctg gacttgctga agcttttcat ttagaagatg cacgtatcaa
      241 gtggaagtta aacggggaga aaggtaatgc tgatttaggt gcaggtgccg cacatagtga
      301 agcacttacc tttattgctg aaaaattgtt atctgacgaa ttaaaagcag gtatcggcgc
      361 gattggtcat cgtattgttc atggcggtga aaaattcacc tcatcagttg taattaccga
      421 tgaagtgatt aaaggtattg aagatgcaac gcaatttgca ccattacaca accctgcgca
      481 tttaattggt attaaagaag cattccgcat tttccctgaa ttaaaagaca aaaacgtagc
      541 tgtatttgac actgcattcc atcagacaat gccggaacac gcattcttat atgcacttcc
      601 atatacattc tataaagaaa atggtattcg tcgctacggt ttccatggca caagccactt
      661 ctatatcacc tcacaagttg cagaattagc aggtaagtct gttgagcaaa ccaatgccat
      721 tatttgccac ttaggtaacg gtggttctgt ttctgttgta cgcaatggta aatgtattga
      781 tacctcaatg ggtttaactc cattagaagg tttagtaatg ggtactcgct ctggtgactt
      841 agaccctgcg attatctctt tcttatacaa taacttaggt atgtcaatgg acgaaattga
      901 tactactcta gtaaaaaaat ctggtctttt aggtttaact ggcgtaacta gtgactgtcg
      961 ttatgcggaa gataattaca atgacgtatc aaaaccggaa gcaaaacgtg ctttagatgt
     1021 atatagctat cgtttagcta aatatattgg ttcatatatg gcaattttag gcgatgacca
     1081 cttagatgct atcgcattta caggtggtat cggtgaaaat tcaggcttag tacgtgaatt
     1141 aaccttaaat cacttaaaat tatttggcat taagttagat caagagcgta accttgctgc
     1201 ccgttttggt aaagatggag tcattacagc ggacgagtca acatttaaag ctgttgttat
     1261 cccaactaat gaagaactcg tgattgcaca agataccgct aaattagcat tataatcata
     1321 gggggcagat attctgccct ttcactttct tttaatttgg aaatattatg tctagaacga
     1381 tcattcttat ccctatttca actggtgttg gtttaaccag tgttagctta ggtttagtac
     1441 atgctttgga gcaaaaaggt tctaaagtag gatttttaaa accgatttct caacctatca
     1501 gcggtgaaga tacgttagac cgctcaacaa cgattatcag agcagaacaa acaacagagg
     1561 ttggtgagcc gtttatgtta agcgaagctg aaacattaat cggtcaaaac caaacggatg
     1621 tattgttaga aaaagtggtg gaacgccacc aaaaattatc aaaaaataat gaaattgtca
     1681 ttgttgaagg tttaattcca acgcgtaaaa actcatacgc taacagcatt aactatgaaa
     1741 tggctcaagc ccttgatgct gaaattgtat tagttgcagc accggcctca gatacaccag
     1801 ctcaattaaa agagcgagtt gaagctgccg cttcacaatt tggtggacgt aacaacccaa
     1861 atttactggg cgttattatc aataaattca atgcaccagt agatgattca ggtagaaccc
     1921 gtccagattt gactgaaatt tttgattcat ttcaacactc aaataataat gtttcagaag
     1981 tcgagcatct ttttgctaaa agtccaatta agctgttagg ctgtattagc tggaaagcag
     2041 aacttattgc tacacgagca attgatgttg caaaacattt aggcgcttca attattaatg
     2101 aaggcgaaat aaaggctcgt cggattcgcg gtgtgacatt ctgtgcacgt aacttaccaa
     2161 atatggtcga tcattttaaa gccggtagtt tattagttac ctctgcggat cgtcctgaag
     2221 tgttagttgc tgcatcgttg gcggtaatga atggcatcga aattggtgct attttactaa
     2281 ccggtggtta taaaattgat agctcaattg caaaactttg ccaacaagca tttgaaaccg
     2341 gtgtgcctgt attccgtatt gaaggtaaca cttggcaaac cgcattaagc ctacaaagct
     2401 tcagcttaga agtgcctgta gatgataaag agcgtattgc tgcaattaaa gaatatatgg
     2461 caagcaaatt taatgtaggt ttcattgatg aggtttctaa agccgctact cgtgcaagac
     2521 gtttatcacc tgcagcattc cgttaccaat taaccgaata tgcccgtcaa gcgaaaaaac
     2581 gcattgtttt acctgaagga gatgagcctc gtactgtgaa agcggctgca ttatgtgctg
     2641 agcgtggcat tgcagaatgt gtgttattag ctaacccaac agacgtacaa cgtgttgctg
     2701 aagcacaagg cgtggtatta ggtaaaggcg taacgattat tgaccctgcg agcattcgtg
     2761 aaaattatgt tgatcgctta gttgaattgc gtaaagcaaa aggaatgact gaagttgttg
     2821 ctcgtgagca acttttagat acagttgtat tgggtacaat gatgcttgaa gctaatgaag
     2881 tggacggttt agtctcaggc gcagttcaca caaccgctaa cactattcgc ccaccaatgc
     2941 agatcattaa aactgcaccg ggaagctcta ttgtatcttc tatcttcttt atgctactac
     3001 ctgatcaagt attggtatat ggtgactgtg cggtaaaccc tgacccaact gcagaacagc
     3061 tagcggaaat tgcgattcaa tcagcagaat ctgccaaagc ctttggtatt gaccctcgtg
     3121 ttgcaatgat ctcctactct accggtacat caggttcagg tgcggatgta gaaaaagtga
     3181 aagaagcaac tcgtattgcc caagaaaaac gtccagattt aatcattgat ggcccattac
     3241 aatatgatgc ggcgattatg gaagatgttg cccgctcaaa agcaccaaat tcacctgtag
     3301 caggtaaagc aactgtattt gtcttcccgg atttaaatac tggtaatacc acctataaag
     3361 cggtacaacg ttcggcagat ttagtctcta tcggcccaat gttacaaggt atgcgtaaac
     3421 ctgtaaatga cttgtcccgt ggggctttag ttgacgacat cgtttatact attgcgttaa
     3481 ctgcgattca agcaacgcaa taattccctc ccaaatgaaa ccaaatgccc ttaaaactaa
     3541 gggcattttt attttttacc tacccgactt ttcaatttaa tcatataatc aagattagtg
     3601 ttaaaaagga gaatttatgg aaaaaattga acgcttattt gccaataacc acgcctgggc
     3661 aactaagatg aaagatgaac aatcggatta ttttaaagaa ttagcggaac atcaaaagcc
     3721 aacctattta tggattggct gttccgatag tcgtgtgcct gctgaaaaac tcacagggtt
     3781 aggccccgga gaattatttg ttcatcgaaa tgtagcaaat atggtgattc acactgatct
     3841 taattgtctg tcggttgttc aatatgcggt agatgtatta gaaattgagc atattattat
     3901 ctgtggtcac actaattgtg gtggtatcaa tgcggcaatt gcacaaaaag aacttggttt
     3961 aattaataac tggttgttac atattcgtga tatctggttt aaacacagcc atttactagg
     4021 caaacttccc tatgaagagc gatcaaatgt cttgacccga ttaaatgttg cagaacaagt
     4081 ttataattta ggtcagtcct ctattattaa aaccgcttgg gaacagggta aatccctctc
     4141 gctacacggt tgggtatacg atgttacaga tggtttcttg attgaccaag gtgttatggc
     4201 tactagccga gaaacattag aaattaccta tcgtaatgca atagctaaaa taacaaccga
     4261 agcaaacgaa aaaatagttt taaacgatga aaattagcca ttgtaagcgg ttaaatttat
     4321 cgatttt
//
LOCUS       DANLXD010000147         4237 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.148, whole genome shotgun sequence.
ACCESSION   DANLXD010000147 DANLXD010000000
VERSION     DANLXD010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4237)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4237)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4237
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.148"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(5..1411)
                     /locus_tag="PXD18_002404"
     CDS             complement(5..1411)
                     /locus_tag="PXD18_002404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HDL6302779.1"
                     /translation="MKLTKIVLSVVAVIGAVAVGGSWYTGKQVEEKYQELVVQANNQL
                     KQLSGEFGANIELKDVQIDRHFFISNAKYRLEVDLGNGKKLDFVGNDKLHHGPLPLNR
                     LAKLNLAPVMMSAESKLQAPEALKKLMGEHIGTGFSNISYSGDVEGHFDISPIKHSDE
                     TGHIETTPIKVQYSYDQKLKGVDSTVELESLKIKAEEFDFQIQGIVYDVQTENNESYP
                     NLTLGKGSGKINAIEFKSKDGKLSQIKDVVVKGDNLLKGDRLISTGDLEAATFNIEGV
                     EMGKLKMDMAYDLDAKLTNDITPLLSNPQTLENEKTGELLLQLLAKSFKFHINNFSLE
                     NSKGKVDLALLLNMAQFDPQNLGNMQAVLQALSTSKFTSNINRQYAEDIIRQVSIVTE
                     KLGEEEAKAFAKQQVDAVFLNAGVEQYGLRKVDDNNVKIELTIDNGKVNLNGRELTED
                     ELQMALFMIVMGAGSLGQ"
     gene            complement(1461..2267)
                     /gene="trpA"
                     /locus_tag="PXD18_002405"
     CDS             complement(1461..2267)
                     /gene="trpA"
                     /locus_tag="PXD18_002405"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HDL6302780.1"
                     /translation="MSRFDTLFTALKAKNEGAFVPFVTLCDPGFERSFEIIDTMIKNG
                     ADALELGFPFSDPLLDGPVIQAANKRALDGGYSTDSCFELIAKIRAKYPDIPIGLLLC
                     ANLIFVPTAEVFFQRCQQSGVDAVLIADLPVFAAQEFVPTAEKYGIQPVFICPPNADQ
                     NTIERIAQLTQGYTYLVSRAGVTSAENQAHASNLDNLVESLKQAGAAPILQGFGIAKP
                     EQVKEALRLGADGAISGSAIVKIIERNLADQANLLKELAEFVQVMKAATK"
     gene            complement(2269..3459)
                     /gene="trpB"
                     /locus_tag="PXD18_002406"
     CDS             complement(2269..3459)
                     /gene="trpB"
                     /locus_tag="PXD18_002406"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HDL6302781.1"
                     /translation="MSDTLLNPYFGEFGGMYVPEILVPVLKELEQAFVDAQQDPTFQA
                     EFADLLKNYAGRPTALTLCRNLTKGSKTKLYLKREDLLHGGAHKTNQVLGQILLAKRM
                     GKTRIIAETGAGQHGVATALACAMLGMPCVVYMGAKDVERQSPNVFRMRLMGAEVIPV
                     QKGSCSLKDACCEAMRDWAANYDTTHYLIGTAAGPHPFPTMVREFQKMIGEEIKRQIL
                     AKEDRLPDAVIAAVGGGSNAIGMFADFIEEQSVKLIGVEPAGKGIETGEHGAPLKHGT
                     TGIYFGMKSPIMQDKDGQIEESYSISAGLDFPSVGPQHAYLNATGRAEYVSITDAEAL
                     EAFQALAKNEGIIPALESSHALAYALKMIKQNPEKEQLLVVNLSGRGDKDIFTVDKIL
                     NGGE"
     gene            complement(3471..4223)
                     /locus_tag="PXD18_002407"
     CDS             complement(3471..4223)
                     /locus_tag="PXD18_002407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL6302782.1"
                     /translation="MKIALVTGVTAGFGLAICKLLLQSGYKVIGTGRRAERLEELHLQ
                     FGDKFLPLAFDIQQPDEVEKALNSRPKAWQQIDLLVNNAGLALGLEPAQKADLNDWYQ
                     MIDTNIKGLVTMTRLVLPEMVERKSGHIINIGSIAGTYPYPGGNVYGGTKAFVKQFSL
                     NLRADLAGTKVRVSNVEPGLCGGTEFSNVRFKGDDEKAAKVYENVQFVRPEDVANIVL
                     WLNQQPEHVNINRVEVMPVAQTSSALNVARNI"
BASE COUNT         1165 a          990 c          754 g         1328 t
ORIGIN      
        1 atgattattg cccgagtgag cctgctccca tcacaatcat aaacagagcc atttgaagtt
       61 catcttcggt cagttcacgt ccgtttaaat tcacttttcc gttatctata gttaattcaa
      121 tcttcacatt gttgtcatct acttttctta atccgtactg ttcaactccc gcattgagaa
      181 aaacagcatc aacttgttgc ttggcaaatg ctttcgcctc ttcttcgcct aatttttctg
      241 taactattga gacttggcga ataatatctt ccgcatattg acggttgata tttgaagtga
      301 atttacttgt tgaaagggct tgcaataccg cttgcatatt accaagattt tgtgggtcaa
      361 attgagccat attcagtaat aaagccaaat caactttgcc tttgctgttt tcaagtgaga
      421 aattattaat atggaattta aatgattttg ctaatagttg taataataac tcgcctgttt
      481 tttcattttc taatgtttga ggattagata ataaaggcgt aatatcattg gttaatttag
      541 catctaaatc gtatgccata tccattttta atttacccat ttcaacaccc tcaatgttga
      601 aagtggctgc ctctaaatct ccggtagaaa ttaaacgatc gccttttaat agattatcgc
      661 ccttcaccac aacatcttta atttgagata atttgccatc tttagactta aactcaatag
      721 cgttaatttt tccactacct ttgcctaaag ttaaattagg ataactttca ttattttctg
      781 tttgaacatc ataaactata ccttgaattt gaaaatcaaa ttcttctgct tttatcttaa
      841 gactttctag ctcaacagtg ctatcaaccc cttttaattt ttggtcgtag ctatattgca
      901 ctttgattgg cgtggtttca atatgacctg tttcatcact atgtttaatc ggggaaatat
      961 caaaatgccc ttccacatcg cccgaatagc tgatattaga aaaaccggtg ccaatatgtt
     1021 cacccatcaa ttttttaagg gcttcaggag cttgtaattt gctttccgca ctcatcatta
     1081 caggagctaa attaagtttc gctaaacgat taagcggtag cggaccgtga tgaagtttat
     1141 cattaccaac aaagtccaat ttcttaccat tacccaaatc cacttctaaa cgatatttcg
     1201 cattagagat aaagaaatgg cgatcgatct gcacatcttt aagctcaata ttcgcaccaa
     1261 attcgccact cagttgttta agttggttat tagcttgaac aaccaattct tgatattttt
     1321 cttcaacctg cttacctgtg taccaacttc cgccaactgc aacagcacca attaccgcta
     1381 caactgaaag aacaattttt gttaatttca ttctgtttcc ttttattttc aaaaaaattt
     1441 aaaaaatgac cgcttgtagt ttacttcgta gccgctttca tcacttgtac aaattcggca
     1501 agttctttga gcaaattagc ttggtcagct aaattacgtt caataatttt cacaatcgct
     1561 gagcctgaaa tcgccccgtc tgccccaagc cttaacgcct cttttacctg ttcaggtttg
     1621 gctatgccaa aaccttgtaa gataggggca gctccggctt gttttaaact ttccactaaa
     1681 ttatccaaat tacttgcgtg agcttggttt tcagcactag ttacaccggc acgggaaact
     1741 aaataagtgt agccttgggt taattgagca atccgttcaa tggtgttttg atcagcattc
     1801 ggcgggcaaa taaacaccgg ctgaattcca tatttttcag cggttggcac aaactcttga
     1861 gcagcgaaaa caggcaaatc agcaatcaac accgcatcaa ctccactttg ttggcaacgt
     1921 tggaaaaata cttctgcggt tggcacaaaa attaaattgg cacacagtag taaaccgata
     1981 ggaatgtctg gatatttagc tcgaattttg gcaatcagct caaaacagct atcagtgcta
     2041 tagccaccat ctaaagctcg tttattcgct gcttgaatca ccggcccgtc taagaggggg
     2101 tcagaaaacg gaaagcctag ctctaaagca tcagccccgt ttttaatcat cgtgtcgata
     2161 atctcaaaac tgcgttcaaa accaggatcg cataatgtca caaacggcac aaaagcccct
     2221 tcgttttttg cttttaatgc agtaaatagc gtatcaaagc ggctcatttt actctcctcc
     2281 atttaaaatt ttatccacgg tgaaaatgtc tttatcgcct cgacccgata aattcaccac
     2341 taataactgc tctttttcag ggttctgctt aatcattttt aacgcatagg ctaaggcgtg
     2401 ggaagattct aacgccggaa taatcccctc atttttggct aatgcttgga atgcctctaa
     2461 agcctctgca tcggtaatcg atacatattc agctcgccct gtcgcattta aataagcgtg
     2521 ttgcggcccg acagaaggga aatctaagcc ggctgaaatg gagtaagact cttcaatttg
     2581 cccgtcttta tcctgcataa tcggcgattt cataccgaaa tagatccccg ttgtgccgtg
     2641 tttgagcggt gcaccgtgtt caccggtttc aattcctttt cctgccggct caacaccgat
     2701 caatttgacg gattgctctt cgataaaatc tgcaaacata ccgatagcat ttgagccacc
     2761 gcctacggca gcaatcaccg catcaggcaa gcggtcttct tttgctaaaa tttgacgttt
     2821 gatctcttcg ccaatcattt tctgaaattc acgcaccatt gtcgggaacg ggtgcgggcc
     2881 ggctgcagtg ccgattaggt aatgggtagt atcataattt gccgcccaat cccgcattgc
     2941 ctcgcaacag gcatctttga gcgagcaaga gcctttttgt accggaatca cctccgctcc
     3001 cattaaacgc atacggaata catttggcga ttggcgttct acatcttttg cgcccatata
     3061 caccacgcaa ggcattccta acatcgcaca cgctaatgcg gttgccacac cgtgctgtcc
     3121 tgctcctgtt tcggcaataa tgcgggtttt acccattcgt ttagcgagta agatttgccc
     3181 tagcacttgg ttggttttat gtgccccacc gtgtaaaaga tcttcacgtt ttaaatagag
     3241 tttggtttta ctgcctttgg ttaaattacg acaaagggtt aaagcagtcg ggcgaccggc
     3301 atagtttttg agtaaatcgg caaattcagc ttggaatgtt gggtcttgct gagcatctac
     3361 aaaggcttgt tctaattctt ttagcaccgg cactaaaatt tccggcacat acataccacc
     3421 aaattcacca aaataaggat taagaagtgt gtctgacata atatttcctt ttaaatattt
     3481 ctcgctacat ttaaggcaga agaagtttga gccaccggca tcacttcaac ccgattaata
     3541 ttaacgtgtt caggttgctg attcagccaa agcacaatat ttgccacatc ttccgggcgc
     3601 acaaactgca cgttttcata aactttagcc gctttttcat catcgccttt aaagcgtaca
     3661 tttgaaaatt ccgtaccgcc acatagcccc ggctcaacat tggaaacacg cactttagtg
     3721 ccggctaaat ctgcccgcaa atttaggcta aactgtttca cgaaggcttt agtaccacca
     3781 tatacattac cgcccgggta agggtaagtg ccggcaatcg agccgatatt aataatatgc
     3841 ccacttttcc gctccaccat ttcaggcaaa actaagcgtg tcatcgttac caatccttta
     3901 atattggtat cgatcatttg ataccaatcg ttcaaatctg ctttctgtgc cggttctaag
     3961 ccgagtgcaa ggcctgcatt gtttactaat aaatcaattt gttgccacgc tttagggcgg
     4021 ctattcagtg ctttttccac ctcatcgggc tgttgaatat caaatgcaag cggtagaaat
     4081 ttatcgccaa attgtaaatg cagttcttct aaacgctctg cccgtctgcc cgtgccaatt
     4141 actttataac ccgattgaag caataattta caaattgcca acccaaatcc agcagttact
     4201 cctgtgacta atgctatttt catcttttca ccctcaa
//
LOCUS       DANLXD010000148         4170 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.149, whole genome shotgun sequence.
ACCESSION   DANLXD010000148 DANLXD010000000
VERSION     DANLXD010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4170
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.149"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..1081)
                     /locus_tag="PXD18_002408"
     CDS             complement(<1..1081)
                     /locus_tag="PXD18_002408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL6302783.1"
                     /translation="MGIMSKSISIFNHKGGIAKTTTAFNVGWSLANQGYQVLLVDLDS
                     QCNLTGLVLGYDQCKEDSDLALFYNNRHHLTMEGIVEALINGQSPDNYLSGNVGQITQ
                     TLNPNLFLLPGHLNVSELDSQISVSLKIAAGVPATRNIPGNLPTLIKKVAEQNNIDYI
                     LYDLSPNVGGLNEVILMSSDYFIVPTSPDFFCWQAVGSLAKNIRKWHNELKAFKELNG
                     FNQSSYAIKNKPQFLGTIQQRYRPRKGQPAKSFEKWIERIRNEVITNFVPVLKTIDCA
                     IDDTAIYAALKSTNSDLEPFDLAHIADFNSLIAISQELRVPVFSLTKEQIKNSGQFGH
                     ALNTMDESKENFDQEFQSLAERIIQL"
     gene            complement(1146..1577)
                     /locus_tag="PXD18_002409"
     CDS             complement(1146..1577)
                     /locus_tag="PXD18_002409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302784.1"
                     /translation="MKKMAIVALSAFFSMNAFANNNVVYSCTTTDNQTLKVTKEGGNY
                     VYSHGNTTFKNPVKEALKNPASEIAGGSQFTTISLELRNAGKSYIVGHIEADPKSPFE
                     ASVQIQDIKTGNDITSFECRSDKPIRHNFDRKLMRKSGFAA"
     gene            complement(1581..3683)
                     /locus_tag="PXD18_002410"
     CDS             complement(1581..3683)
                     /locus_tag="PXD18_002410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL6302785.1"
                     /translation="MKKAKSLKFLTACIMLTTMSGYANSNTVNVGNSISNFIENTTGY
                     RTGNLGVSGNNALTEYYPVLSDYMHYSIGGGSAISAPASRGRPNQYGIGIGWKSNLTC
                     GNFDIKLSIKNQLNGITEGFKDLYGNIIESATGAVASLPAMIIQRANPQLYDILSNGL
                     YQGKLDFNNFKTSCEAMSNQLADLAMDSKLAKMAGLHRAAEIAETEPDAMAAKKKMDK
                     KDAEKGIPWVGGEQRGGKNQKPMAIVADIVGAGYNLALGRGPLEKGDIPIASCDGMLC
                     TEWKNPSEAAAYASEVIGETFLDACETCEQSSSGAKAGKGIAHFIEQTTIEKATKLEA
                     ALNHLDSLTPEQLNSLSTSTVSVTKGVLEAIAASPDAALLGARLSQELAISKEMEKLL
                     LIRRAMLAGMREPNVIKSSLVEEAERNLKLLDREIEQVKLEMELQRSINGNTALAAIT
                     QQMNEQALAIDDNAMGDGNRRFANLSNQAGANNLNTSGIANSAQNAVGDRYIAIPKSD
                     GSGMSDFYGAYKASPTNIVSNVNVGSYTQIAQMNGNANEQATALIKQFEGYLSHGKWD
                     VNANRAGYGSDTYTTADGMVHRVQKGTYVSREDAERDLARRMPQFMNVARGNVGADVW
                     AKLTPQAQAALTSVSYNYGSLSKLESVQKAAAVSAQSGDMTALANSIRNLQGHNNGVN
                     ARRRNQEADYIINAPKGN"
     gene            complement(3710..3988)
                     /locus_tag="PXD18_002411"
     CDS             complement(3710..3988)
                     /locus_tag="PXD18_002411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HDL6302786.1"
                     /translation="MQAKTFYYLPLLLLSAMASASPANKPSDVTVKVFTSESYPKVFP
                     HSGDWATHSDSFSNTENYSWALWRPYSCCKKQGQVFLGHVDWKSTHTH"
BASE COUNT         1157 a          824 c          797 g         1392 t
ORIGIN      
        1 tcagttgtat aattcgttct gctaatgatt gaaattcttg gtcaaaattt tctttacttt
       61 catccattgt attcaaagca tgtccaaatt gacctgagtt tttaatttgc tcttttgtta
      121 aggaaaatac gggaactcgt agctcttggc taatagcaat caacgaatta aagtcggcta
      181 tgtgagccaa atcaaatggc tctaagtcag aattcgttga tttaagagca gcataaatag
      241 ctgtatcatc aatagcacaa tcaatagttt ttaataccgg cacaaaattc gtaatgactt
      301 catttctaat tcgctcaatc catttttcaa atgatttggc cggttgccct tttcttggtc
      361 gataacgttg ctgaatagta cctaaaaatt gtggcttatt tttaattgca taagatgatt
      421 ggttaaaacc attaagttct ttaaatgctt ttaactcatt atgccatttg cgaatatttt
      481 tagcgagcga accaactgct tgccagcaga aaaaatcagg tgatgtaggt acaataaagt
      541 aatcactaga cattaggata acttcattta atccacccac atttggacta agatcataga
      601 gtatgtaatc aatattgttt tgttcagcta ctttcttaat taaagtcgga agattgccgg
      661 gtatatttct tgttgctgga acaccggcag caatttttaa tgatacacta atttgcgaat
      721 caagctcgga aacattaagg tgaccaggta acaagaacag atttggattc agggtttgag
      781 tgatttggcc aacatttcca ctaaggtagt tatcagggct ttgtccgttt atcagtgctt
      841 caacaatacc ttccatagtc aaatgatgtc tattattgta aaaaagcgct aaatcactat
      901 cttctttgca ttgatcgtag ccaagtacca gaccggttag gttacattgt gaatccaaat
      961 cgactaacaa tacttgatag ccttgatttg ctaaactcca accaacatta aatgcagttg
     1021 tagttttagc aatacctcct ttatgattaa aaatactgat agacttactc ataataccca
     1081 taattctatg aaataattaa cccaccgaac tcatttgaga atggtgggtt aatgctttgc
     1141 tttagctagg ctgcaaatcc agattttctc atcagtttgc gatcaaagtt gtggcgaata
     1201 ggcttatcgg aacgacattc aaatgatgta atatcatttc ctgttttaat atcctgaatc
     1261 tgaacacttg cttcaaaagg tgatttaggg tctgcttcta tatgacctac aatataagat
     1321 tttcctgcat ttcttaattc gagcgagatt gttgtgaatt gtgaaccacc tgcaatctcc
     1381 gatgccggat ttttgagagc ttcttttaca ggatttttga atgtggtatt accgtgagag
     1441 tacacatagt ttcccccctc tttggtaact tttaacgttt ggttatctgt agttgtgcaa
     1501 gaatacacta cattgttatt tgcaaaagca ttcattgaga aaaatgctga taaagctaca
     1561 attgccattt ttttcatagg ttagtttcct tttggtgcgt tgataatgta atcggcttcc
     1621 tggttacgtc ttcgagcatt aacaccatta ttatgccctt gtaaatttcg gattgagtta
     1681 gctaaagccg tcatatcacc tgattgtgcg gagacggcag ccgctttttg aacactttct
     1741 agtttagata atgacccata gttgtatgat accgacgtta atgctgcttg tgcttgagga
     1801 gtcaatttag cccaaacgtc ggcaccaaca ttaccccttg caacattcat aaattgaggc
     1861 attcttcgtg ctaaatcacg ttcagcatct tcccggctta cataagtgcc tttttgaacc
     1921 cgatgaacca taccatctgc agtagtatag gtgtcagagc catatccggc acggttagca
     1981 tttacatccc atttcccgtg gcttaaatat ccttcaaact gtttgataag agccgttgct
     2041 tgttcattcg cattgccgtt catttgggca atttgggtat agctccctac attcacgtta
     2101 ctgacaatgt ttgttgggga ggctttatat gctccataaa aatcactcat gcctgagccg
     2161 tctgatttgg ggatagcaat atatctatcg ccaacggcat tttgtgcaga attagcaatg
     2221 ccactggtgt tgagattatt tgctccggct tgattgctta aattggcaaa gcgacggttt
     2281 ccatcaccca tcgcattatc atcaatagca agagcttgtt cgttcatctg ttgagtaatt
     2341 gcagctaatg ctgtattacc gttgattgaa cgttgcagtt ccatttcgag tttaacttgc
     2401 tcaatttctc tgtcaagtaa tttgaggttt ctttctgctt cttctactaa ggaagatttt
     2461 ataacatttg gctcacgcat accggctaac attgctcggc gaatcagtag caatttttcc
     2521 atttctttag aaatagctaa ttcttgcgat aaccttgcac ccagcaaggc tgcatccggc
     2581 gaagcagcaa tggcttctaa tacgcctttt gttacactga ccgttgatgt actcagtgaa
     2641 ttgagttgtt ccggcgttaa actatctaag tgattcagtg ccgcttctag ctttgtggct
     2701 ttttcaatag ttgtttgttc aataaaatgg gcgattcctt tcccggcttt agctccactt
     2761 gaactttgtt cacaagtttc acaggcatca aggaatgttt caccaatcac ttcacttgca
     2821 taggcagcag cctcgcttgg atttttccat tccgtacaaa gcataccatc acagcttgca
     2881 ataggtatat ctcctttttc taatggtcct cgtcctaaag cgaggttata tccggctcca
     2941 acaatgtcag caacgatagc cattggtttt tgatttttac caccacgttg ttcgccacct
     3001 acccaaggga tgcctttttc agcatctttt ttatccattt tcttcttggc tgccattgca
     3061 tcaggctctg tttcagcaat ttcagcggct cggtgtaatc cggccatctt tgctaattta
     3121 ctgtccattg ctaaatcagc aagttggtta gacatggctt cgcaactggt tttgaagttg
     3181 ttgaagtcaa gttttccttg atatagacca ttagaaagaa tgtcatacag ttgaggattt
     3241 gctcgttgga taatcatcgc cgggaggctg gcaactgcac cggttgctga ctcaataata
     3301 ttgccataaa gatctttaaa accttcagta ataccattaa gctggttttt aatggaaagt
     3361 ttaatatcaa agttgccaca agttaaattc gatttccagc caatgccaat cccatattga
     3421 tttggtctgc cacgggaagc tggtgcggaa atggcactac ctcctccaat ggagtagtgc
     3481 atataatcag aaaggacagg gtagtattcc gtgagagcgt tattaccaga aacgcctaga
     3541 ttaccagtcc tatagcctgt tgtattttca ataaaattac taatgctatt gccaacatta
     3601 acggtattac tatttgcgta tccgctcatg gttgtgagca ttatacaagc ggttagaaat
     3661 ttgagacttt ttgctttttt catttattta tcctaatagt gctgataatt taatgagtat
     3721 gtgtactttt ccagtccaca tgacctaaaa aaacttgccc ttgtttttta cagcaagaat
     3781 agggcctcca taatgcccag ctgtaattct cagtattgga gaaactatct gaatgggtag
     3841 cccaatcacc actgtgcgga aagactttag ggtaggattc ggaagtaaat accttaactg
     3901 ttacatctga gggtttatta gcaggactag cacttgccat agctgaaagc agtagtagtg
     3961 gtaaatagta aaatgtctta gcttgcataa atgctccaca aatagagtaa ttcacgttta
     4021 ccttaaaaga tgatttggtt agaagaaatc ggaaattgtt ttttggtttt ggagagtttt
     4081 tgttagtata taagttaatg taacaaggga gagtggatgt atgagcaata gaatacctaa
     4141 agcctgttat gcttacccaa aatcgccgaa
//
LOCUS       DANLXD010000149         4131 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.150, whole genome shotgun sequence.
ACCESSION   DANLXD010000149 DANLXD010000000
VERSION     DANLXD010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4131)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4131)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4131
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.150"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            32..1489
                     /locus_tag="PXD18_002412"
     CDS             32..1489
                     /locus_tag="PXD18_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302787.1"
                     /translation="MRSTFKLTLAALAVSIVLSGCKSSQGPSIVADSPPPKEITATDG
                     NDKEKTDNKEKKSAQPNKSDPQPDKPANAKDPVKPDAETNKPSKKDKEYTPPATEKID
                     NSSVQPDKMVPNPIENKENDSNKPNPKESDSDNNDKVTEGNKPNAPTETVNKDKEAEK
                     SKKENKEDSSNNTPNINFDGAKPIDTDSKGSPYRVINLNPRKSVVNASAMQKVDFDSF
                     TDESVENSPFVSSDTEKEYNNTLVFGLGAGDKDSYFKNLNQKGDKHLGIHSGVYEDAN
                     LEGNTKKINYLYVNQPYSSYGALFTDQKDSHLFNVRLTAGRDDVKENGDSYAEYGVFT
                     QSGKEAKWNDNLIGDATYKGQAIARVIRQVNGEQVAGIPQFDGDVTLNLHLSKEWNES
                     KLNGKIDSQSVGVITLKESEIANPTALRSNIGFGEEVIVENKENLVGDYAVDFTGPQL
                     EEAVGVVELENEAETFSENEVIKYNAVFGVSKAAK"
     gene            1553..2965
                     /locus_tag="PXD18_002413"
     CDS             1553..2965
                     /locus_tag="PXD18_002413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL6302788.1"
                     /translation="MKKIALLALFPMMLFARDPNTTQAYIEHTAQPTTTPQRVKIEKS
                     VPIFNETELRANQLLTEKLLIQAIYSRRLANMEKLTAIYRDFTHIDPVLLRYAQGKIA
                     LLKGDYAQAIQHFQTILAKQPKLNTVRIELAIALLYDQQLNQAQAQFEKAKSAEHLPP
                     KVHALIEQYQQHLAKKQEWKFSFSANYVRDGNINRTSKQPNIEQTGYVKQPNLLPQTA
                     HGVHYAFGLQRDFNLFDSHYVSFDNQTQGELYWDNHDYDEITNRTLFGYAYKKSDQTT
                     RLLPFYEKRWKHHRSERWTNGIRLEHAQWFSPHWQLATALEYGKKRYFDLPIYNGSYK
                     LASATLLWLRNPQQFFFVGTDFNQDKTQLKQYSSDTKGIRFGWQREWQALELSSRLTL
                     GYTDRRYKDTAILGGKLNLGRIRHDRVQSANLTLWKRDWHWLGLMPKLQFSYAKHRSN
                     LPSLYAYTDKNINLIIESRF"
     gene            complement(3215..3538)
                     /locus_tag="PXD18_002414"
     CDS             complement(3215..3538)
                     /locus_tag="PXD18_002414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin"
                     /protein_id="HDL6302789.1"
                     /translation="MQKAYQIYTHSEREKVTEAKLELGKVETRLRNEGKTKEEIAQHP
                     EYLQLKRDLNDKQQTFDNAYGTGSKTKRAVDAVTAALQGLAAKDSGQAAVGLASPYLN
                     EQIKK"
     gene            complement(3507..4034)
                     /locus_tag="PXD18_002415"
     CDS             complement(3507..4034)
                     /locus_tag="PXD18_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDL6302790.1"
                     /translation="MRDKNKERQQTLERYQELYDQDPELRVIAANSEGDLDLLQETFF
                     VKGELTITDSTPKEKWNWLHMCNLNSYSPSPLSVVEFYIKHGVDVNAQDCYGMTPLHY
                     AMRAKNVDAAIALLNAGADPNIENKDQVIPLSMIGAVPKEIELIEHDISEVKETQELV
                     KGIGEIAEGLSDLHA"
BASE COUNT         1327 a          872 c          764 g         1168 t
ORIGIN      
        1 ttttatggat ttaatctgac ggagacaaaa tatgcgttct acattcaaac ttactcttgc
       61 agctttagct gtttctattg ttttaagtgg ctgtaaatct agccaaggtc catctattgt
      121 tgcagacagc cctccaccta aggaaataac agctactgat ggcaacgata aagagaaaac
      181 cgataacaaa gagaaaaagt ctgcgcaacc aaataaatcc gatcctcaac cggataaacc
      241 tgctaacgca aaagacccag taaaacctga tgcggagaca aataaaccaa gtaaaaaaga
      301 taaagaatat acaccacctg ctactgaaaa aatcgataac tcatcagtac agccggataa
      361 aatggtgcct aatcctatcg agaataagga aaacgacagt aataaaccta accccaaaga
      421 aagcgatagc gataataatg acaaagtcac tgaaggcaat aaaccaaatg ccccaacaga
      481 aacagtaaat aaagataaag aagctgagaa aagtaaaaag gagaataaag aggactcaag
      541 caataatact cctaacatta attttgacgg ggcaaagcct atagatacag atagtaaagg
      601 tagcccgtac cgagtaataa acctaaatcc gagaaaaagc gtagtaaatg caagtgctat
      661 gcaaaaagta gatttcgact cttttacgga tgaatctgtt gaaaattcac catttgtcag
      721 tagcgatact gaaaaagaat acaataatac acttgttttt gggcttggtg ccggagataa
      781 agattcttat tttaagaact taaatcaaaa aggggataaa catttaggta ttcatagtgg
      841 cgtgtatgaa gatgcgaatt tagaaggtaa tactaaaaaa attaactatc tctatgtaaa
      901 tcaaccttat tcgagctatg gtgctttatt tacggaccaa aaagacagcc atttattcaa
      961 cgttcgtctg accgctggta gagatgatgt aaaagaaaat ggagatagtt atgccgaata
     1021 tggtgtattc acacaatcag gaaaagaagc taaatggaat gataacctga ttggtgatgc
     1081 cacttacaaa ggtcaagcta ttgctcgcgt tattcgtcag gtaaatgggg aacaagtcgc
     1141 aggtattcct caatttgatg gtgatgttac attaaattta cacctttcca aagaatggaa
     1201 tgaaagtaaa ctaaacggca aaattgatag ccaaagtgtt ggggtaatta cacttaaaga
     1261 aagtgaaata gctaacccta ccgcactccg ctcaaatatt ggttttggag aagaagtcat
     1321 agttgagaat aaagagaatc ttgtgggtga ttacgctgtc gattttaccg ggcctcagct
     1381 tgaagaggcg gtaggcgttg ttgaattaga aaacgaagcc gagacattct ctgaaaatga
     1441 agtcattaaa tacaatgcgg tatttggcgt aagcaaagcg gcgaaatagt attttttgta
     1501 tcttacaaag ggctgttaag cccttttatt tttattattt taaggataaa aaatgaaaaa
     1561 aattgcctta ctggcacttt tcccaatgat gttatttgcc cgagatccta atactacaca
     1621 ggcttatatt gagcatactg cacagccaac tacaaccccc caaagggtca agatcgaaaa
     1681 atcagtgcct atttttaacg aaactgaatt acgtgctaat caattattga ccgaaaagct
     1741 acttatccaa gctatttata gtcgtaggct tgctaacatg gaaaaattaa ctgcgattta
     1801 tcgggatttt acccacattg acccggtttt actgcgttat gcacaaggta aaattgccct
     1861 actgaaaggc gattacgcac aggcaattca gcacttccaa accattcttg ccaaacaacc
     1921 caaactaaac actgtaagaa ttgagctggc gattgctcta ttgtacgatc agcaacttaa
     1981 tcaagcccaa gcacaatttg aaaaagccaa aagtgccgaa catctaccgc ctaaagttca
     2041 cgcattaatt gagcaatatc agcaacatct ggcaaaaaaa caggaatgga aatttagttt
     2101 ttcagccaat tatgtgcgag acggcaacat taaccgaacc tcgaaacagc cgaacattga
     2161 gcaaaccggc tatgtaaaac aacctaattt gttgccccaa accgcacatg gtgttcacta
     2221 tgcgtttgga ttacagagag atttcaacct gttcgactca cactatgtga gttttgacaa
     2281 ccaaacccaa ggtgaacttt attgggataa ccacgattat gatgaaatta ccaatcgcac
     2341 cttgtttgga tacgcttaca aaaaatccga ccaaaccacc cgcttgttac cgttttatga
     2401 aaaacgctgg aaacatcacc gttcggaacg ctggacaaac ggaattcgac ttgaacacgc
     2461 acaatggttt tcaccgcatt ggcaactcgc caccgcattg gaatacggca aaaaacgtta
     2521 ttttgatttg ccgatttata acggcagcta caaacttgcc tctgccacat tgctttggtt
     2581 acgcaatcca caacaatttt tctttgtcgg cactgatttc aatcaagaca aaactcagtt
     2641 aaaacaatat agctctgata ctaaaggcat acgctttggc tggcaacgag aatggcaagc
     2701 cctcgagctt tccagtcgcc tcacgcttgg ctatactgac agacgttaca aagacaccgc
     2761 tatattggga ggaaaactta atcttggcag aatccgccat gaccgtgtgc aaagtgctaa
     2821 cctcacgctt tggaaacgag attggcactg gctcggcctg atgccgaagc tgcaatttag
     2881 ttacgccaaa caccgtagca acctgccgag cctctatgcc tacaccgata aaaacatcaa
     2941 tttaattatt gaaagtcggt tctagctcca taaaaacaac aagcggttaa aattcctaga
     3001 aattttgcaa attgcaaaaa atgtagaaaa tttaaccgct tgtatctata ctgcagcttc
     3061 ttttccttca gtataaatta atatacaccg ttgcaacaat aatggctgct ccctgtcatc
     3121 accttgaact gaaaattgct caaggtggat atgactatcg cagccgcttc caccgcaccc
     3181 agtaatgtat gggcaagcag gttggcttgg gtatctactt tttaatttgt tcgttgagat
     3241 atggcgaagc taagcctact gctgcttgtc ctgaatcttt cgccgctaaa ccttgtaagg
     3301 ctgccgtcac cgcatccacc gcacgcttgg ttttgctgcc cgtgccgtag gcgttatcaa
     3361 aagtctgctg tttatcgttt aaatcccgtt ttaattggag atattcagga tgttgagcga
     3421 tttcttcttt tgtttttccc tcatttctca aacgggtttc cactttgccc aattccagct
     3481 tcgcttccgt cactttttca cgctcactat gcgtgtaaat ctgataagcc ttctgcaatc
     3541 tcgcctatgc ccttcaccag ctcctgtgtt tctttcacct cactaatatc gtgttctatt
     3601 aactctatct ctttaggaac tgctccaatc atagacaatg gaataacttg atctttattt
     3661 tcaatattcg gatctgcccc cgcatttaat aatgctatcg ctgcatcaac attctttgcc
     3721 ctcattgcat aatgtaaagg ggtcattccg tagcaatctt gggcattaac atctacccca
     3781 tgtttaatgt aaaattcgac tacagaaaga ggagatggtg aataactatt taagttacac
     3841 atatgtagcc agttccattt ttcttttggt gtgctatccg taatagtcag ttcacctttt
     3901 acgaaaaatg tttcttgtaa aagatcgaga tcgccttctg agtttgctgc aataactctt
     3961 aattcaggat cttgatcata taattcttga taacgttcta atgtctgctg acgttcttta
     4021 ttcttatctc tcattttact ttcctatttg ttggaatttt ttcatgtcat cgattattga
     4081 tttaatatta tctttccccg gcatctcatt cttatgactc cgattttcag a
//
LOCUS       DANLXD010000150         4127 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.151, whole genome shotgun sequence.
ACCESSION   DANLXD010000150 DANLXD010000000
VERSION     DANLXD010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4127)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4127)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4127
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.151"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(230..1870)
                     /gene="pgi"
                     /locus_tag="PXD18_002416"
     CDS             complement(230..1870)
                     /gene="pgi"
                     /locus_tag="PXD18_002416"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013527751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDL6302791.1"
                     /translation="MQKINPVQTFAWNALEQHKADNLSIPQLFAEDPNRFDKYSLRFE
                     DQLLVDFSKNAINEKTLTLLRQLANECGLESAKNAMFSGKKINRTENRAVLHVALRNR
                     ANTPIAVDGKDVMPEVNAVLAKMKDFCERVISGEWKGYTGKTITDVINIGIGGSDLGP
                     YMVTEALRPYKNHLNMHFVSNVDGTHIAEVLRKVNPETTLVLVASKTFTTQETMTNAL
                     SARKWLLDSAKDESAVAKHFVALSTNAKEVEKFGIDTANMFEFWDWVGGRYSLWSAIG
                     LSIALSLGFENFEQLLAGAHAMDKHFLITPIEKNIPTTLALVGIWNNNFLGAESEAIL
                     PYDQYMHRFAAYFQQGNMESNGKFVGRDGKPVTHQTGPIIWGEPGTNGQHAFYQLIHQ
                     GTKLIPCDFIAPAQTHNPLSDHHNKLLSNFFAQTEALAFGKSKETVEKEFLDAGKTLE
                     EVAEIVPFKVFSGNKPTNSILVQKITPYSLGALIAMYEHKIFVQGVLFNIYSFDQWGV
                     ELGKQLANRILPELETDEKINSHDSSTNGLINQFKAWR"
     gene            complement(1903..2151)
                     /locus_tag="PXD18_002417"
     CDS             complement(1903..2151)
                     /locus_tag="PXD18_002417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HDL6302792.1"
                     /translation="MLTPKNLEAIAQQLHNALPQSLKNVGNDLDEKFKQILQAQLARL
                     DVVTREEFDVQSQVLLRTREKLTELEKRLDELTQRTDE"
     regulatory      2275..2319
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
     gene            2323..2991
                     /gene="queC"
                     /locus_tag="PXD18_002418"
     CDS             2323..2991
                     /gene="queC"
                     /locus_tag="PXD18_002418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HDL6302793.1"
                     /translation="MTHQKPKAVVIFSGGQDSTTCLFQAIAEFGKENVEVVTFQYGQR
                     HSIELEKARWISNDLGVKQTLIDTSVIKAITTNALMDNNAEIQQQGSTPNTFVDGRNA
                     LFLLYTAIYAKGQGIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTP
                     LMYLTKKETWALADKLGAFDYIRDHTHTCYLGVEGGCHDCPSCVLREKGLNEYLAERE
                     VSNV"
     gene            2984..3406
                     /gene="queD"
                     /locus_tag="PXD18_002419"
     CDS             2984..3406
                     /gene="queD"
                     /locus_tag="PXD18_002419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HDL6302794.1"
                     /translation="MFKIAKEFSFDMAHMLDGHDGKCQNLHGHTYKLQVEVAGELFQE
                     GAKRGMVMDYSDLKAVVKQHILEPMDHAFIYDLQSERESQVAQLLIDLNSKVYGIPTR
                     TTAEEMAKYMFEKLEKVGLPVSLIRLWETPTSYCEYSK"
     gene            3406..4032
                     /locus_tag="PXD18_002420"
     CDS             3406..4032
                     /locus_tag="PXD18_002420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HDL6302795.1"
                     /translation="MAELISNPRFPIVEIFESLQGEGFNTGMPAIFVRFGKCNLTCPW
                     CDTNYNQFEQWTLSDILAKVRSYSAKNVIITGGEPTIQPNLSLLLEQFKKEGYFLAIE
                     TNGLKEVPAQIDYIATSPKRMYQEKYQRRCIEFANEVRIVVDGEVQGFCEQIESQIKA
                     EHYYLSPCEVEGKMNLLETITQIGLLNQRPNKPKWQLSIQTHKIVGIE"
BASE COUNT         1253 a          757 c          875 g         1242 t
ORIGIN      
        1 tgagtgaaga gtagaggtaa aatagtaagc ctttttaacc agtttattta ttgtacctat
       61 tttagaaaaa agaaaagtag aaaagagata ttaggtaaac tcatagtgca aaagaatata
      121 gaaaaaactg cttgtgtaga aatggcgctt agttcagtcc tcagctaaaa ttttagaaaa
      181 aaagcataga gattttttac ctctatgctt tttattgtat tgactatatt taacgccaag
      241 ccttgaattg gttaattaaa ccatttgtgg agctgtcgtg gctgttgatt ttttcatcgg
      301 tttcgagttc gggtaaaatg cggtttgcaa gctgtttgcc taactccacg ccccattggt
      361 cgaaactgta aatgttgaac agcacgcctt gcacgaagat tttgtgttca tacattgcaa
      421 ttaatgcccc taagctgtac ggggtgattt tttgcaccaa gatagagttg gtcggtttgt
      481 ttccgctgaa cactttaaac ggcacgattt cagctacttc ttccaacgtt ttacctgcat
      541 ctaaaaactc tttttcaact gtttcttttg atttaccgaa agctagtgct tcagtttgag
      601 caaagaagtt agaaagcagt ttgttgtgat gatcgcttaa cggattgtga gtttgtgccg
      661 gtgcgataaa atcacaagga attaattttg tgccttgatg aatgagttga tagaatgcgt
      721 gctgaccgtt agttcccggt tcgccccaaa taatcggacc tgtttggtga gtaaccggtt
      781 tgccgtcacg ccccacaaat ttaccgtttg attccatatt gccttgttgg aaataagccg
      841 caaagcggtg catatattgg tcgtaaggta aaatcgcttc tgattcagca cctaagaaat
      901 tgttattcca aatgccgact aaagctaacg tagttggaat gtttttctca atcggcgtga
      961 ttaagaaatg cttatccatt gcgtgagcac cagcaagtag ctgctcgaag ttctcaaaac
     1021 ctaatgaaag ggcaatcgaa agcccgatgg cagaccataa tgagtaacga ccgccaaccc
     1081 aatcccagaa ttcaaacata ttagcggtat caataccgaa tttttccact tctttggcat
     1141 tggttgaaag tgccacgaaa tgttttgcta ccgcagattc atctttggca gaatcaagta
     1201 gccatttgcg agctgaaagg gcattggtca tcgtttcttg agtggtaaag gtttttgaag
     1261 ccactaacac taacgtggtt tcaggattaa ctttacgcaa cacttcagca atatgcgtgc
     1321 cgtccacgtt agacacaaag tgcatattaa ggtgattttt ataagggcgt aatgcctctg
     1381 ttaccatata aggacctaga tccgagccac caataccgat attgatcaca tcagtaatcg
     1441 ttttgccggt atagcctttc cattcgccgg aaataacacg ctcgcagaaa tctttcattt
     1501 tcgctaacac ggcattcact tccggcatta catctttgcc atcgactgcg attggtgtat
     1561 tggcacggtt acgcagtgca acgtgcaata cggcacggtt ttcagtgcgg ttgatttttt
     1621 tgccggagaa catcgcattt tttgctgatt ccaaaccaca ttcatttgcc agttggcgaa
     1681 gtaaggttaa ggttttttcg ttgatcgcat tttttgaaaa atcgactaat aattgatctt
     1741 caaaacggag ggaatatttg tcgaaacggt ttggatcttc ggcaaaaagt tgaggaatag
     1801 aaaggttgtc tgctttatgt tgctctaagg cattccaagc aaaagtttgc acagggttaa
     1861 ttttttgcat ctgagtttcc ttatactaaa ttaaaaaatc gattattcat ctgttctttg
     1921 agtcagttca tcaagacgtt tttctaattc ggttaatttt tcacgagtgc ggagtaacac
     1981 ttgagattga acatcaaatt cttcacgagt gacaacatca agacgggcta attgggcttg
     2041 aaggatttgc ttaaattttt catctagatc attaccgaca ttttttaagc tttgcggtaa
     2101 ggcgttatgg agttgttgag caatcgcttc taagttcttc ggcgtgagca tatttaaatt
     2161 ccttactata aatgagtatc ccaattttat tgaattttgg gtttaagaga aagcaaattc
     2221 tttgtaaaat atcacctttc gcaaaataca agcaaaaaag accgcttgta ttttttattt
     2281 gtggttcgta aacctcccac acaaaaaaac taaggacaca aaatgactca tcaaaaacca
     2341 aaagccgttg tgattttttc cggcggtcaa gactctacca cttgtttatt ccaagctatt
     2401 gctgaatttg gcaaagaaaa tgtggaagtc gttacctttc aatatgggca acgccattcg
     2461 attgaacttg aaaaagcacg ctggatttct aacgatttag gcgtcaaaca aacgctgatt
     2521 gatacttcgg tgattaaagc gattactacc aatgcgttaa tggataataa tgctgaaatt
     2581 caacaacaag gcagcacacc caataccttt gtggatgggc gtaatgcctt atttctgctt
     2641 tataccgcca tttatgccaa agggcagggc attcaaacta tttttaccgg cgtgtgtgag
     2701 accgatttta gtggttaccc tgattgccga gatgtatttg taaaatcaat gaatgtaacg
     2761 ctaaatttag cgatggacta taatttcaac attcgcacgc cattgatgta tttaactaaa
     2821 aaagaaactt gggcattagc agataagctg ggtgcttttg attatattcg agaccatacc
     2881 cacacctgtt atttaggcgt tgaaggtggt tgccacgact gcccgagttg cgtattgcga
     2941 gaaaaaggct tgaatgaata tttagcagaa agggaggtaa gcaatgttta aaattgctaa
     3001 agaatttagt tttgatatgg ctcatatgct agatggacac gatggcaaat gccaaaactt
     3061 acacggacac acctacaaat tgcaagttga ggtggcaggt gagctatttc aagagggagc
     3121 taaaagagga atggtaatgg actattcgga tctaaaagca gtggtaaaac aacatatttt
     3181 agagccgatg gatcacgctt ttatttacga cttacagagt gagcgtgaaa gccaagtagc
     3241 acaattatta attgatttaa actccaaggt ttatggtatc ccaactcgta ccacagccga
     3301 agaaatggcg aaatatatgt ttgaaaaatt agagaaagtg ggcttaccgg ttagcctaat
     3361 tcgcttgtgg gaaacgccta cttcttattg tgagtacagc aaataatggc ggagttaatt
     3421 tcaaaccctc gttttccgat tgttgagatc tttgaaagct tacaagggga aggctttaat
     3481 accggaatgc cggctatttt tgtacgtttt ggcaaatgca acctcacttg cccgtggtgc
     3541 gataccaatt acaatcaatt tgagcaatgg acgttaagcg atattcttgc caaagtaaga
     3601 agctattctg cgaaaaatgt gattattacc ggaggcgagc caacgattca gcctaattta
     3661 tcgttattat tagaacaatt taaaaaagag ggatattttt tagcgatcga aaccaacggc
     3721 ttaaaagagg ttccggcaca aattgattat attgcgacca gcccaaagcg aatgtaccaa
     3781 gaaaagtatc aacgccgttg cattgaattt gcgaatgaag tccgtatcgt cgttgatgga
     3841 gaagtacagg gtttctgtga gcaaatagaa agccaaatta aagctgagca ttactatctt
     3901 tcaccttgtg aggtagaggg aaaaatgaac ttgctggaaa ccatcaccca gattgggtta
     3961 ttaaatcagc gtccaaataa gcctaaatgg cagctaagta tccaaacgca taaaattgtg
     4021 gggattgaat aagtagaagt tagaagatga tttgtaaaag atcagacttg atctgacaat
     4081 tcactctaaa aagtgagagt ttcccgttta gaatatgagt gtccaaa
//
LOCUS       DANLXD010000151         4039 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.152, whole genome shotgun sequence.
ACCESSION   DANLXD010000151 DANLXD010000000
VERSION     DANLXD010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4039
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.152"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            42..1517
                     /gene="mepM"
                     /locus_tag="PXD18_002421"
     CDS             42..1517
                     /gene="mepM"
                     /locus_tag="PXD18_002421"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein DD-endopeptidase MepM"
                     /protein_id="HDL6302796.1"
                     /translation="MAVFLLAVFSLFVDIVLALKDQSSINNTSSQEDIIAIDKQEKYQ
                     SINTNLAENNTLHQEQHSSFINYVTDLLTQSALVIEHDDEIVDDQTATSYEDELVGQD
                     DEVEEGIETVENQVPGEKLPEEAEKALEDLLDVADQALRIQNQFSYTVARGDKLKDVL
                     EQSGLTASVAKNLIKQHSALAQLEPGQQFYWVLDNDGELEYMNWLVSEKEERVYERKE
                     NGKFSFQRFEKKGEWKLDVVRGTIQNSFAVSLKAVGLSDRQINQLAVGLQSQIATNKL
                     KKGDRFAILIKREYIDGKVTDLGNVEGIHVISSKKSYYAIQADNGRYYSRYGETLSGG
                     FARHPLLFAARVTSSFNPKRRHPITGRISPHKGVDYGVPIGTPIIAPSDGVVEHVAYQ
                     ARGAGRYIRIKHGHITTVYMHLSKTLVKPGQSVKKGERIALSGNTGGSTGPHLHYEFH
                     INGRPVNPITVKLPGSNSGMGNKERQAFLNKAKNVESRLKM"
     gene            1527..2210
                     /gene="dsbC"
                     /locus_tag="PXD18_002422"
     CDS             1527..2210
                     /gene="dsbC"
                     /locus_tag="PXD18_002422"
                     /EC_number="5.3.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional protein-disulfide
                     isomerase/oxidoreductase DsbC"
                     /protein_id="HDL6302797.1"
                     /translation="MKKNLITLGLMCLSTITFASDAKLKSQLEKIGATDVKISDSPLT
                     GFKMATSNEGVVYISQDGRYVIQGKVFELKNGKAIDITNQGLLAELNSYTNEMIVYPA
                     KNEKHVITVFMDITCHYCHLLHTKIKEYNDLGITIRYLAFPRGGMNTQTAKQMEAIWT
                     SADKVKALNDAEDGKLPTQIKTPDIVKKHYQLGIKFGVTGTPNMVTSEGELIGGYVEP
                     KELAKMLSE"
     gene            2295..4016
                     /gene="recJ"
                     /locus_tag="PXD18_002423"
     CDS             2295..4016
                     /gene="recJ"
                     /locus_tag="PXD18_002423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HDL6302798.1"
                     /translation="MEKIIKRRPLLTTEIVSTNPLLNRIYQSRGIKNTQELEHNLKNL
                     HRPQQLANIEQAVDLLLQAFREKSRIIIVGDFDADGATSTSLALIALRQLGFDKVDYL
                     IPDRFSQGYGLSVAVAEMVLAKGADLVLTVDNGISSTEGIALLKSHQIQVLVTDHHLP
                     PESLPNADALVNPNLAFCEFPSKSLAGVGVIFYVMMALRSRMREQHLFENKPEPNFAE
                     LLDLVALGTVADVVPLDQNNRILVHQGLQRIRSGHCRLGIKALAEVGKRDLSTLQAAD
                     LGFAIAPRLNAAGRLENMSLGVELLICENMELARRLALDLDSLNQTRKEFEQEMKAEA
                     LSICANLPSLAQSEQAHGIVLYQADWHQGVIGILASRIKDQFNRPVIAFAQESEESEY
                     LKGSARSINGVHMRDLLEHIDMRHPDLIEKFGGHAMAAGLTIHQSKLDLFKQIFDQSI
                     NAIIEPEQLQGIIYTDGELNALEFTLANAEMIRQGGPWGQHFPEPSFEGEFSILQQKL
                     LAGKHLKLMLQSEKGQLFDAIWFNVDVRAFPDLSIKKARLVYRLDINEFRGEKSLQLK
                     VEYLKYI"
BASE COUNT         1353 a          644 c          884 g         1158 t
ORIGIN      
        1 ttttagcgag agatcgtaag cgacataaaa aacattttaa gattgcggtt ttcttattag
       61 cggtatttag tctatttgtt gatattgttc tcgcactaaa agatcaatcc tcaatcaata
      121 atacatcttc acaggaagat attattgcca ttgataaaca ggaaaaatat cagagtatca
      181 acactaattt ggcggaaaat aatactctcc atcaggagca acattccagt tttattaatt
      241 atgtgactga tttactgact cagtcggcat tagtaatcga acatgacgac gaaattgttg
      301 atgatcaaac agcgacttct tatgaagatg aattagttgg gcaagacgat gaagtagaag
      361 aagggattga aacggttgaa aatcaagttc ctggggaaaa actcccagaa gaagctgaaa
      421 aggcattaga agatttactt gatgtggctg atcaagcact acgaattcaa aaccaattca
      481 gttataccgt agctcgaggt gataaactta aagatgtatt agagcaatca ggcttaactg
      541 catccgttgc gaaaaattta attaagcaac attcggcatt agcacaatta gaaccgggtc
      601 aacaatttta ttgggtatta gataatgacg gtgaattaga atatatgaac tggctggttt
      661 ccgaaaaaga ggaacgggtt tatgagcgaa aagaaaatgg taaattttct tttcaaagat
      721 ttgagaaaaa aggggaatgg aagttagatg ttgtaagagg aactattcag aatagttttg
      781 cggttagctt aaaagccgtt ggcttatcag accgccaaat taaccagcta gcggttggat
      841 tgcagtcaca aattgcgacg aataaattaa aaaaagggga taggtttgca attctgatta
      901 agcgggaata tattgacggc aaagtaacgg atttaggaaa tgtggaagga atccatgtaa
      961 ttagcagtaa aaaaagttat tatgctattc aagcagataa tggacgctat tatagtcgat
     1021 atggtgaaac attaagtgga ggatttgctc gtcatccatt attatttgca gcaagagtaa
     1081 cttcttcttt caaccccaaa cgcagacacc ctattacagg gagaattagt ccgcataaag
     1141 gggttgacta tggcgtgcca ataggtactc cgatcatcgc accaagtgat ggtgtcgtag
     1201 agcatgtggc atatcaagcc cgtggagcag gacgttatat tcggataaaa cacggacata
     1261 ttacgactgt ttatatgcac ctcagcaaaa cgttggtaaa accagggcag agtgttaaaa
     1321 aaggggagcg gatagcatta tcgggtaata caggcggttc aaccgggcct catttacact
     1381 atgaattcca tattaatggt cgaccggtca acccgattac ggtaaaattg cctggctcaa
     1441 attcaggtat gggtaataaa gaacgtcaag cattcttaaa taaagcgaag aatgtagaaa
     1501 gtagattaaa aatgtaagga ttctcaatga aaaaaaatct aatcacttta ggattaatgt
     1561 gtttatcaac catcacgttt gcttcagatg caaaactaaa aagccagctt gaaaaaattg
     1621 gagccacaga tgttaaaatt tcagattctc cattaacagg ctttaaaatg gcgacttcaa
     1681 atgaaggtgt tgtatatatc agccaagacg gtcgttatgt aattcaaggt aaagtatttg
     1741 agctaaaaaa tggtaaagcg attgatatta ctaatcaagg attgttggca gaattgaatt
     1801 catacactaa tgaaatgatc gtatatccag cgaaaaatga gaaacatgtg attacggtgt
     1861 ttatggatat tacttgccat tattgccatt tactacatac taaaatcaaa gaatataatg
     1921 atttaggtat taccattcgc tatttggcat tcccgcgtgg tggaatgaat acccaaacag
     1981 caaaacaaat ggaagctatt tggacatcag cagacaaagt aaaagcactg aatgatgctg
     2041 aagatggtaa attaccaacc caaataaaaa cgccggatat tgtgaaaaaa cattaccaat
     2101 tagggattaa atttggtgtg acaggtaccc caaatatggt aacttcagaa ggtgagttga
     2161 ttggtggtta tgtagagcct aaagaattag cgaaaatgtt aagtgagtaa ttcattaact
     2221 tgaatacaag cggtcttttt ttgtaaaatt tttgcaaaag aagaccgctt gttgtttcat
     2281 taaagaagag tattgtggaa aaaataatta aaaggcgccc attattaaca acggaaatag
     2341 tctctacaaa cccgttatta aatcgaatct atcaaagtcg aggcataaag aatacgcaag
     2401 aactagagca taatttaaag aatttgcata gaccacagca acttgccaat attgagcaag
     2461 ccgttgactt gctattacaa gcctttcgtg aaaaaagccg gatcattatt gtgggtgatt
     2521 ttgatgcaga tggtgcaacc agtacatcgc ttgcccttat tgcgttacgc caattgggtt
     2581 tcgataaggt agattattta attccggatc gtttttctca ggggtacgga ttgagtgtag
     2641 cggttgctga aatggtatta gcaaaagggg cggatttagt cttaacggta gataatggaa
     2701 tttcttcgac tgaaggcatt gctctgctaa aaagccatca gattcaagtt ttggttaccg
     2761 atcatcattt accgccagag agcctaccca atgcagatgc actggtaaac cccaatttag
     2821 ctttttgtga atttccgtct aaatctttag ccggggtagg cgtgatcttc tatgtaatga
     2881 tggcattgcg ttctcgtatg agagaacaac atttatttga aaataaacca gagccaaatt
     2941 ttgctgaatt actggattta gtcgctttag gcacagtggc tgatgtagtg ccgttagatc
     3001 aaaataatcg gatattggtg catcaagggt tacagcgaat ccgttcaggg cattgccgtt
     3061 tagggataaa agctttagcg gaggtgggca agcgagatct ttctactttg caagcagcag
     3121 atttgggttt tgctatcgca ccacgtttga atgcagctgg tcggttagaa aatatgtctt
     3181 taggggttga gttactaatt tgtgaaaata tggaattagc tcgccggctt gcgcttgatc
     3241 ttgattctct taatcaaacc cgaaaagagt ttgaacaaga aatgaaagca gaagcactgt
     3301 cgatttgtgc gaatttgcca agtcttgcgc agtctgaaca ggcacacgga atagtgttat
     3361 atcaagcaga ttggcaccaa ggtgtaattg ggatcttagc ttctcgcatt aaagatcaat
     3421 ttaaccgtcc tgtcattgct tttgcacaag aaagtgagga aagtgaatat ctaaaaggtt
     3481 ctgctcgctc gatcaacgga gtacatatgc gagatttact ggaacatatc gatatgcgac
     3541 atccagactt gattgaaaaa tttggtggac acgcaatggc ggctggtttg actatccatc
     3601 aatcaaaatt agatttattt aaacagatat ttgaccaatc tattaatgca attatcgagc
     3661 ctgagcaatt acaaggcatc atttataccg atggtgagtt aaatgcacta gagtttactt
     3721 tagccaatgc cgagatgatt aggcaaggtg ggccttgggg acaacatttt ccagaaccta
     3781 gttttgaagg ggagtttagc attctccaac aaaaattact cgcaggtaaa catttaaaat
     3841 taatgttgca atcagagaaa gggcaactat ttgatgcaat ttggtttaat gtggatgtaa
     3901 gggcgtttcc tgacttatcg atcaaaaagg caagattagt ttataggttg gatattaatg
     3961 aatttcgagg agagaaatct ttgcaattaa aagtggagta tcttaaatat atttgaaatg
     4021 ttattttatg taaatttaa
//
LOCUS       DANLXD010000152         3963 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.153, whole genome shotgun sequence.
ACCESSION   DANLXD010000152 DANLXD010000000
VERSION     DANLXD010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3963)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3963)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3963
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.153"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            308..685
                     /locus_tag="PXD18_002424"
     CDS             308..685
                     /locus_tag="PXD18_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDL6302799.1"
                     /translation="MDKSQGVVSVNIRGGSGFGRANNAVGPNYMGMLAGKYQFNDSTW
                     IGALFGHSWRKISQNYKIGGGRKVTDSSIDLSKIDDLDKESSTTSPFNAAHLKQKPMS
                     RMAKLEYGDKYQTITLLPKSGSG"
     gene            1415..2191
                     /locus_tag="PXD18_002425"
     CDS             1415..2191
                     /locus_tag="PXD18_002425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDL6302800.1"
                     /translation="MNYSATLSAYIHDLFTPFISYSQTHRAPNIKEIFFSNLGDYGVN
                     TALQPEQAKTTQFGINGFKERVFSEEDKLGFKVLFYNTHLKNYIYNVQHTAVGSAPSL
                     FIFHKNYEKPVNIKGIELEFSYDIGSFYGNLAYARQNTNQPVSFTDASSRVDAASHYG
                     FKTQGFGASKISALPRDYGSLELGTRWFDQRLQIGGVAKYYGKSKRIAIDEFNYTYYP
                     GTHIVKETHRLEETVNKQPIIVDFYVSYEPIKSLILKLEL"
     gene            2795..3289
                     /locus_tag="PXD18_002426"
     CDS             2795..3289
                     /locus_tag="PXD18_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6302801.1"
                     /translation="MSRKYKFHEKSGAYFVSFATVYWVGVFVREIYFQVIVDALDYCR
                     KHKGMILYAYCIMPTHIHLLFQAENQNPSDLIRDFKTFTAKILIQRIKDNLQENRREW
                     LLWMFSRAAERRCNVKQYQFWQHHNQPIEIYSQKFFDEKLNYIHQNPVVSGFVSEPWE
                     WKYN"
     gene            3544..3783
                     /locus_tag="PXD18_002427"
                     /pseudo
     CDS             3544..3783
                     /locus_tag="PXD18_002427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651213.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
BASE COUNT         1340 a          630 c          743 g         1250 t
ORIGIN      
        1 acttctttct tcagtgtctt tagcgttgcg atttaaattt aattacattt tttataggaa
       61 agacaataga aatgaagatc aaaaaatatg tatttcacct gacttataca acacttatct
      121 gccccttacc tagggtattc gcagaggaag gttatatgtt agatacggtt gaggttaaag
      181 cccaagcaat aaaaaaacag atgaagtttt cattaaaaca ggggcaataa gcacccgaga
      241 taaaatcttg gaatcaaacc aaagcttaga gactattgtt cgttctatgc ctggcgcatt
      301 tacacaaatg gataaatctc aaggtgtggt ttctgttaat attcgaggag gttctggatt
      361 tgggcgagct aataatgcag taggcccaaa ttatatggga atgctcgctg gcaaatacca
      421 attcaatgac tctacttgga taggagcatt atttgggcat agttggcgca aaatctctca
      481 aaattataaa ataggaggcg gacgaaaagt tacggatagc tcgattgacc ttagtaaaat
      541 tgatgatcta gataaagaaa gttctaccac ctcaccgttc aatgcagctc atttaaaaca
      601 aaaaccaatg agtcgtatgg ctaaattgga atatggcgat aaataccaaa ccatcacact
      661 attaccaaag tcaggtagcg ggtagacatt taaaaaacca aaacaaccag ttaaattatc
      721 gttttcactt gcccgagtca ccttggttag atgttcaagt ggcctatgcg gaaaatcaag
      781 gcaaacaaaa ctacaacaaa gggagctgaa ttaataataa atatttaatt caaggtttgg
      841 caattaacaa caaagcgaca accttaaatt tgagtaacac ctttaaagtg tctccgttta
      901 aagatggaga atgggaagca atattaggtt ttaatcgttt aaagaaccgc tatagtaaaa
      961 atagacatcc tgcggaatta aactataact tagagaatgg cgaaaccagc gaaaacaacg
     1021 attctgtagg aatgacagcc gttcgtaaat cgctttatac ttcaactttc cagcctgatg
     1081 gcgaacagaa gttcgatact ttttatctcg acaatcactt taactatggt atatggggat
     1141 tggatataaa cgcaaatatt aataccgctc ggtttattgg tcagcgtttt aaatattttc
     1201 cttttgcgat tagagaattg gagtcagata ttagacaggc aagtagaaat aggcagtttg
     1261 agcatttaag gtcattacaa tctcaattag acaacttgca aaaaaacatt gtacatatat
     1321 tccagatgag gattttccta atgatcctga attgggagag tttaactgtc ctgatgtcaa
     1381 ttttcctcat acagcaacag gaaaacataa acgaattaat tattcagcaa ccttgtctgc
     1441 ttatattcac gatttattca cgccctttat tagttattct caaacacatc gagcccctaa
     1501 tattaaagaa atattcttct ctaatttagg tgactatggt gtaaataccg cactacaacc
     1561 agagcaagcg aaaacaacac agtttggtat taatggattc aaagaacggg tatttagtga
     1621 agaagataaa ttaggattta aagtgctatt ttataacact cacttaaaaa actatattta
     1681 taatgtacaa cataccgctg ttggtagtgc tcctagttta ttcattttcc acaaaaacta
     1741 tgaaaaacca gtaaatatca aagggataga attagaattt agttatgata taggctcttt
     1801 ctatggcaac ttagcttatg ctcgtcaaaa tacgaatcaa cccgtatcct ttacagatgc
     1861 aagttcaagg gtagatgccg cttctcatta tggttttaaa actcaaggtt ttggtgccag
     1921 caaaatttca gcgttaccaa gagactatgg ctcattggag ttagggacaa gatggtttga
     1981 tcaaagacta caaattggcg gagtggcaaa atattacgga aaaagtaaac gtattgcgat
     2041 agatgagttt aactatactt attatcctgg aacacatatt gtgaaagaaa ctcatcggct
     2101 tgaagaaacc gtaaataaac aacctattat tgttgatttt tacgtgagct acgaaccaat
     2161 caagtcgctt atattaaagt tagaactata aaatgtcttt gacaaaaagt acattgatcc
     2221 tcttgatgct aataatgatg cagcaagtca gagggtttac aattctgata tcagtgatga
     2281 acctatttat acgctcaata attatgcaag agggagaact atagtgttta gcacaagtta
     2341 taaattctaa atggggttgt cctagataag ctagcttaaa tttcctttaa ctaattattt
     2401 ggcatagtga ctaaaattga gtctgcacag taggttaaaa ccttataata taaggattta
     2461 acccagatgg tgcaagcgtc cacgcttgtg ccagttaatt cctgttctga aagtatttca
     2521 gtcataagat aaaagcctaa atcagccaag taaaatttgg tttatttggg cttttgtttt
     2581 tggcacaagc gtggacgctt gcgtcatcat tttatttatc catccattgc tatcatttca
     2641 gtatttcttt ggcttatcac aagcggttaa attttatcaa cactttgcaa gttttaatga
     2701 tttttgcgat ctagatcgaa aaagttatat tggcttgtgg aatttaattt tgaatagggt
     2761 atttttctta ttccttttta agttgagaaa ggctatgagc cgaaaatata aattccacga
     2821 aaagagcggt gcttattttg tcagttttgc aactgtttat tgggttggtg tgtttgtgag
     2881 agagatttat tttcaggtaa ttgttgatgc cttagattac tgcagaaaac ataagggaat
     2941 gattttgtat gcctattgta ttatgccaac tcatatccat ttattatttc aagcagaaaa
     3001 tcaaaatcct tctgatttaa tacgagattt caaaacattc accgctaaaa tacttattca
     3061 gagaattaaa gataatttgc aagaaaaccg tcgggaatgg ttgctgtgga tgttttctcg
     3121 ggcggctgaa cgacgttgta atgtaaaaca atatcaattc tggcaacatc ataaccaacc
     3181 tattgaaatc tattcgcaga aattctttga tgaaaagtta aattatattc atcaaaatcc
     3241 agtggtaagt ggttttgtgt ctgagccttg ggaatggaaa tataattgaa ataaactgct
     3301 tgtatttttg cgatctctgt cgaaaaattg tgaattttta cttgtctgtc ggagaatttt
     3361 gcgtaaattc tgcttattat gttttagtta aaggtattct atgagtagat aacccaaatg
     3421 aaaatagcga tataacctat ttctacccag taattaattc ccgcttttat gtatcagatc
     3481 aaataattta cattgattta tcggtattat ctgtctttag tttttttaat taaggagcct
     3541 tatatgaaat tcaaaaaatt agcattagca gcaatgttag gtggcttatt tgtaacagct
     3601 aatgcggcag aattacctaa tatcactatt ttagcgacag gcggaacgat tgctggtagt
     3661 cagcagaatg caaatagtag tgcttatcaa gcagggcaat tgaatatcga aaccttaatt
     3721 gaagcagtgc cagaaatgaa aacattggcg aatatcaaag gtgagcagat tgtgaaaatt
     3781 ggcccactaa agccttgtta gatgtaggct atcaaggtat tgtcgtagca ggtgttggta
     3841 acggcaatat gagtgcggaa aatcttgcat tatttagagg aagccaacaa tatttttaag
     3901 atttttaata aacgttaaag catataaaaa atggcataag tgagtcactt atgccattat
     3961 ttt
//
LOCUS       DANLXD010000153         3918 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.154, whole genome shotgun sequence.
ACCESSION   DANLXD010000153 DANLXD010000000
VERSION     DANLXD010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3918)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3918)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3918
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.154"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(302..1396)
                     /locus_tag="PXD18_002428"
     CDS             complement(302..1396)
                     /locus_tag="PXD18_002428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HDL6302802.1"
                     /translation="MKKTTLAILASALIANSALAITIYDHKETGTQIEFIGSARIKWE
                     STSDKTSPVNGKATRNHVNHAVDNNGSRFGFRLTQQVGHGFYALGRVEWRMRGDSSSQ
                     HNFDHIYDHQLYAGIGHKQYGELTYGNMTNIADEVKQTDLPNTLSLSDGLLTGSSRRT
                     LQYVYKGIEGLKLGAFYGGNSQRGNNGLDLVNKRKDIWGAAAIYNYKIDDNQSLKLAT
                     GATRERSEQSIGNYERIALAFGTAYTYGKTTLGLDLERRETEDQNAIGHKRIEKEVRT
                     VLLHRLTDQWNAYTMYAYKENKLNAVGLANDSKVKRNQFMLGTEYYIVPKHLKGFVEW
                     QATRAKHYTNDVKTAKSRNYTTVVGLRAYW"
     gene            1530..2708
                     /gene="lpxB"
                     /locus_tag="PXD18_002429"
     CDS             1530..2708
                     /gene="lpxB"
                     /locus_tag="PXD18_002429"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HDL6302803.1"
                     /translation="MKQQFPVIGLVAGEVSGDILGAGLIKALKVHYPNARFIGVAGSR
                     MIEAGCQSLFDMEELSVMGLAEVVKHLPRLLKRRKQVIDEMLKLKPDVFIGIDAPDFN
                     LTVEEKLKASGIKTIHYVSPSVWAWRQKRVFKIARAANLVLAFLPFEKAFYDKFNVPC
                     RFIGHTMADAIPLEPNRTEACLALNIDESKRYMAILVGSRGSEIQFLAEPFLKAAQLL
                     KARFPDLQFLVPMVSQKRMEQFNAIKQQVAPELELNIIQGKARQAMIASECTLLASGT
                     AALEAMLCKSPMVVGYRMKPLTYWLAKKLVKTDYISLPNLLAQAPLVPELIQEACNPE
                     NLAQELSLFLADDEKNQQHKALLKQQFMQLHQSIQCNADEQAAQAVIDLLNGSTSGQI
                     "
     gene            2735..3787
                     /gene="sohB"
                     /locus_tag="PXD18_002430"
     CDS             2735..3787
                     /gene="sohB"
                     /locus_tag="PXD18_002430"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HDL6302804.1"
                     /translation="MWKEVLLNYGIFLLELLTVFGIIAVVVMLILESKKQNENGSISI
                     TNLSEKYKEQQKSLSGFFLSEEELKHQEKQEKKVAKEKAKAEKKRLKAGEECVESPSR
                     LFVLNFNGDMMAHEVNSLRREIDAVISLANPEKDEVLLKLESPGGVVHGYGLAASQLQ
                     RLRDRNIYLTAAVDKVAASGGYMMACVANKIVSAPFAVIGSVGVVAQVPNIHRLLKKH
                     DIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHSLFKQFVARHRPQLDIEQVA
                     TGEHWFGQQAIELNLVDEIATSDDLLLNAIKEKEVIELKYKEKKKLAQKLGSQFEQSA
                     ENLLAKILHKSRSTLM"
BASE COUNT         1165 a          676 c          850 g         1227 t
ORIGIN      
        1 aataacccct catcactttt tgcagtttaa cctcttttgc aacagataat ttaaatttag
       61 gcgttttggc tgctcagtta ttgccattat gattatatta gttcacacta aaattttagt
      121 gttgtttctt aaagctgaag atgctaatag gtgagtaagc ggtttttacc actttgaaga
      181 taaatgcaat agcttcttgt ttgaaggatt agttgtattt aatcataaaa aatctgcacc
      241 ttaatcagtt ggttagccca acttttaggt gcagatcatt ctagtacgct tttcagtttt
      301 attaccaata tgctcgtaag cctacaacag tcgtataatt gcgagatttt gcggttttta
      361 catcattagt atagtgttta gcacgagttg cttgccattc aacaaagcct tttaagtgtt
      421 ttggaacaat gtaatattcc gttcccaaca taaattggtt tcttttaact ttgctatcat
      481 ttgccaagcc tacagcatta agtttgtttt ctttataagc atacattgtg taagcattcc
      541 attgatcggt taaacgatgg agtaacacag tgcgaacttc tttttcgata cgtttgtgac
      601 cgatagcatt ttgatcttcc gtttcacggc gttctaaatc taagccaagg gtagtttttc
      661 cgtaggtata agctgtaccg aaggcaagag caatgcgttc ataattgccg atagattgct
      721 cagaacgctc acgggttgca cctgttgcta attttaagct ttggttatca tcaattttat
      781 agttataaat tgctgctgca ccccaaatat ctttacgttt attgactaaa tctaagccat
      841 tgtttccacg ttggctattt ccgccataga atgctccgag ttttaatcct tcgatgcctt
      901 tgtaaacata ttgaagcgta cgtcgtgatg aaccggtaag taagccatca cttaagctga
      961 gtgtatttgg taagtcagtt tgttttactt catcggcaat attagtcata ttgccgtatg
     1021 ttaattcacc gtattgttta tgcccgattc ctgcatagag ttgatgatca taaatatgat
     1081 cgaagttatg ttgtgagctt gaatcgccac gcatacgcca ttccacacga cctaaagcat
     1141 agaatccgtg acccacttgc tgggttaaac ggaaaccaaa acgagagccg ttgttatcca
     1201 ctgcgtgatt aacgtggttg cgggtagctt taccatttac cggtgaggtt ttatctgagg
     1261 tgctttccca cttaatacga gcagaaccaa taaattcaat ttgtgtaccg gtttctttat
     1321 gatcgtaaat cgtaatagct agagctgagt ttgcgattaa ggctgatgct aaaatcgcta
     1381 atgttgtttt tttcataaaa atcactccat atgaatagat aaagggaggt agtgtatgtg
     1441 aatattcatt gctagacaat aatgttttgt tagtttatat gatgattggt tataatagag
     1501 tcacttacag atcttcaata atatttaata tgaaacaaca attccccgtt attggcttag
     1561 ttgctggtga ggtctctggc gatattcttg gtgccgggtt aattaaggcg ttaaaagtac
     1621 attacccgaa tgctcgattt atcggtgttg caggctctcg aatgattgag gctggctgcc
     1681 agtctttgtt tgatatggaa gagctttctg taatggggct agcagaggtg gttaaacatt
     1741 tacctcgttt acttaagcgt cgtaaacagg ttattgatga gatgcttaaa ttgaaaccag
     1801 atgtatttat cggtattgat gcaccggatt ttaatttaac cgttgaagaa aaactcaaag
     1861 cgagtgggat taaaacaatc cattatgtta gcccttcggt gtgggcttgg cgacaaaagc
     1921 gggtgtttaa aattgccaga gcagctaatt tagtgttggc atttctgcca tttgagaaag
     1981 cgttctatga taaattcaat gtgccttgtc gttttatcgg gcatacgatg gcagatgcga
     2041 tcccactcga accaaatcgt acagaggcat gtttagcgtt aaatattgat gaatccaagc
     2101 gatatatggc aattttggtg ggaagccgtg gcagtgaaat tcagtttttg gctgagcctt
     2161 ttttgaaggc tgctcagttg ttaaaagccc gttttccgga tttacagttt ttagtgccaa
     2221 tggtcagcca aaagcgaatg gagcaattta atgcaattaa acagcaagta gctcccgagt
     2281 tggaactgaa tattattcaa ggcaaggctc gtcaggctat gattgcgtca gaatgtactc
     2341 ttttggcatc gggaacagca gcactagagg caatgttgtg caaatctccg atggtagttg
     2401 gttatagaat gaaaccgctg acttattggt tagcaaaaaa attagtgaaa accgattata
     2461 tctccttacc gaatttattg gctcaagccc cattggtacc agaattgatc caagaagcat
     2521 gcaacccgga aaatttagct caagagttat ctctattttt agctgatgat gagaaaaacc
     2581 aacaacataa agcattgcta aaacagcagt ttatgcagct acatcaatca attcaatgta
     2641 atgctgatga gcaagctgcc caagcggtta tcgatctcct aaacggctcg acaagcggtc
     2701 aaatttagtt agttttttgt aaaaaggaaa atttatgtgg aaagaagtat tacttaatta
     2761 tggtattttt ttattagagt tattaactgt atttggcatt attgcagtgg tggtgatgct
     2821 gattttggaa tcgaaaaagc agaatgaaaa cggctcaatt tcaattacca atttatctga
     2881 gaaatataaa gagcagcaaa aatctctttc cggctttttt ctaagtgagg aagaattaaa
     2941 acatcaggaa aagcaggaga aaaaagtagc aaaagagaaa gctaaagcag aaaaaaaacg
     3001 cttaaaagca ggcgaagaat gtgtagaaag cccttcccgt ttatttgtat tgaattttaa
     3061 tggcgatatg atggctcacg aagtaaattc cctacgccgt gaaattgatg cggtaattag
     3121 cctcgcgaat ccggaaaaag atgaagtttt acttaaactt gaaagtccgg gcggagtggt
     3181 gcacggttat ggattggctg cttcgcagtt acaacgtttg cgtgatcgca atatttattt
     3241 aaccgcagcg gtagataaag tagctgccag cggtggttat atgatggcgt gtgtggcgaa
     3301 taaaattgtc tctgccccat ttgcggtgat tggctcagtg ggggtggtgg ctcaggtgcc
     3361 gaatatccac cgcttactga aaaaacacga tattgatgtg gatgtgatga ctgcaggtga
     3421 atataaacgc acggtgacgc tggtgggaga aaataccgaa aaagggaaac agaaattcca
     3481 gcaagaactg gaagaaacgc actctctgtt taagcaattt gtggctcgac accgcccaca
     3541 actggatatt gagcaggttg caacaggcga gcattggttt ggtcagcaag cgattgagct
     3601 aaatttggtt gatgagattg caaccagtga tgatctgctc ctcaatgcaa ttaaggaaaa
     3661 agaagtgatc gagctaaaat ataaagagaa gaaaaaactt gctcagaaat tgggttctca
     3721 attcgagcaa tcagcagaga acctgctcgc taagatttta cataaaagtc gttcaacgct
     3781 gatgtagcgt atatattatt aaagggctat cgtttatata gccccttatt ttatcagtta
     3841 gtaatagaat gaagtatttg ttcactattt aaatgacctg gaatactttt ctttaaattg
     3901 agtgaagaat ctaacaat
//
LOCUS       DANLXD010000154         3905 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.155, whole genome shotgun sequence.
ACCESSION   DANLXD010000154 DANLXD010000000
VERSION     DANLXD010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3905)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3905)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3905
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.155"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(135..1262)
                     /locus_tag="PXD18_002431"
     CDS             complement(135..1262)
                     /locus_tag="PXD18_002431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen chain length determinant protein
                     WzzB"
                     /protein_id="HDL6302805.1"
                     /translation="MADSVKSHEQSSDEIDLIEIFRALWDKKWWIVITTFITTLLAGI
                     YAFTAKEQWTSKATVIAPKLTELGEYLNVRREYSRILRVDPVDPNALSASLFNNFNRL
                     AQSQDTKNEFFITSNVYKTLAEGKDEQGQRTVLSNLSNENTSFIIPDAKKDPNAIGRT
                     LSFSAETPMEAQDTLGKLVQFINSKAFAVELEDFLVDFQNVLTALQYEKSLIQEDLSV
                     NKSVQLENLNKAYETAQKAGIKEYSKAFNQSDASNIAAALSDTKISLSDSKLADSSYL
                     FMLGEKYLKAQIDVANEKGVVYPPRYYQIDYQLKQLEPLFEKTKTVKTQTFSYQASPD
                     YPVIKDKPKKVIILLIGAFIGLMISCLSIILTHYLLASKFK"
     gene            1411..1752
                     /gene="erpA"
                     /locus_tag="PXD18_002432"
     CDS             1411..1752
                     /gene="erpA"
                     /locus_tag="PXD18_002432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005706127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HDL6302806.1"
                     /translation="MSDIQIPLIFTDAAARKVKSLIEGEENPNLRLRVYITGGGCSGF
                     QYGFTFDDQVNEGDLTIENQSVGLVVDPMSLQYLIGGTVDYTEGLDGSRFVVNNPNAS
                     STCGCGSSFSI"
     gene            complement(1857..2180)
                     /gene="yidD"
                     /locus_tag="PXD18_002433"
     CDS             complement(1857..2180)
                     /gene="yidD"
                     /locus_tag="PXD18_002433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDL6302807.1"
                     /translation="MVKTHSPEQKAGTTESINQPPRLSLLAKILLLPIYFYRYAISPL
                     IGPRCRFYPTCSTYAVEAIKIHGAIKGGYLAFKRILRCNPLSEGGEDPVPLCCKGNCK
                     HNDKK"
     gene            complement(2129..2503)
                     /gene="rnpA"
                     /locus_tag="PXD18_002434"
     CDS             complement(2129..2503)
                     /gene="rnpA"
                     /locus_tag="PXD18_002434"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HDL6302808.1"
                     /translation="MKKLNFSRELRLLAPVQFKAVFEEPLRASTPQMTLLARENNLEN
                     PRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHELPNFDFVFVAKGGIGKLDNATLF
                     ETLEKLWSRHIRLSKKPAQQNP"
     gene            complement(2539..2673)
                     /gene="rpmH"
                     /locus_tag="PXD18_002435"
     CDS             complement(2539..2673)
                     /gene="rpmH"
                     /locus_tag="PXD18_002435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HDL6302809.1"
                     /translation="MKRTFQPSVLKRARTHGFRARMATKNGRQVLARRRAKGRKSLSA
                     "
     gene            2910..3872
                     /gene="hemH"
                     /locus_tag="PXD18_002436"
     CDS             2910..3872
                     /gene="hemH"
                     /locus_tag="PXD18_002436"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HDL6302810.1"
                     /translation="MNQPQQIGILLANLGTPDEPTPSAVKRYLKQFLSDPRVIDLPKF
                     KWQAILNCIILPRRSPKVAKLYQSVWSEEGSPLLAISRQQQRAVQRYFDAKGKNVVVE
                     LGMSYGNPSIESATDNLIKQGVERIIVLPLYPQYSSTTTASVFDAFANGLKAQRKIVP
                     FDFIHSYHNDPLYIQALANSIDVKPDELLLFSFHGIPKRYETEGDFYAKHCQETAELV
                     AEKLGLPREKWYLSFQSRFGDEEWLQPYTDQTLESFPQKGIKKVAVVCPGFSADCLET
                     LEEITEENRENFEHAGGESYRYIPALNASGDHIKALVKLIEAKI"
BASE COUNT         1206 a          736 c          745 g         1218 t
ORIGIN      
        1 cttatcaaaa taaaaattta tcttatcatt tttctcagaa cctagaaaaa ctcccaaaaa
       61 cttttctcct gagtactttt ttacaataga ttcagctatt ttcacttgta atggagtgta
      121 acaaataatc aaattcattt aaatttactc gcaagcagat aatgagttag gataattgac
      181 aaacaagaaa tcatcaaacc aataaaagct cctattaata aaataattac ctttttaggt
      241 ttatctttta ttacaggata atccggcgaa gcttggtaac taaaagtttg tgttttaact
      301 gtctttgttt tttcaaataa cggctctagc tgtttaagtt ggtaatcaat ttgataataa
      361 cgtggtggat aaacaacacc tttctcatta gccacatcaa tttgagcctt taggtatttt
      421 tcccctaaca taaataaata tgaactatct gctaattttg aatcagaaag ggagatttta
      481 gtatcactta aagctgctgc aatatttgat gcatctgatt gattaaatgc ttttgaatat
      541 tctttaatac ctgctttttg tgcagtttca taggctttat ttaagttttc caactgaacc
      601 gacttattca cagataaatc ttcctgaatt aatgattttt catattgtaa tgcagtaagc
      661 acattttgga aatcgactag aaaatcttct aattcaacag caaatgcttt gctattaatg
      721 aattgaacca acttaccaag ggtgtcctgc gcctccatag gtgtctctgc agaaaaagat
      781 agtgtacgac ctattgcatt aggatctttc tttgcatcag gaataataaa gctggtattt
      841 tcattactca aattggataa aactgtgcgt tgcccctgct catcttttcc ttcagctaac
      901 gtcttataca cattggaagt gataaaaaat tcatttttag tatcttgaga ttgtgctaat
      961 cggttaaaat tgttgaacaa actcgcagac aatgcatttg gatcaacagg atctacacgc
     1021 aaaatccgac tatattctct gcgaacattt aaatactcac ctaactctgt taatttaggg
     1081 gcaataactg ttgccttaga cgtccattgc tcttttgcag taaatgcata aataccagca
     1141 agtaatgtgg taatgaatgt tgttataaca atccaccatt ttttatccca tagagcacga
     1201 aaaatctcaa ttaaatcaat ctcatccgag ctttgctcat gactttttac tgaatctgcc
     1261 atagtttcct ctaaaatttg catgtttctg tacagcatta tacataattt tcttatttcc
     1321 actgcattca tttactcttt tttaagattg cacttcctat gtaattatta gataatatcc
     1381 aatcacagta aaattttgat ctaaaacaaa atgagcgata ttcaaattcc tttaatcttt
     1441 actgatgcgg cggctcgtaa agtaaaaagc ttaattgagg gcgaagagaa cccgaatctt
     1501 cgcttgcgtg tgtatattac gggtgggggc tgtagtggat tccagtatgg gttcaccttt
     1561 gatgatcaag tcaatgaggg agaccttacc attgagaatc aaagcgttgg cttggtggtt
     1621 gacccgatga gcctacaata tttaattggt ggcacggtgg attataccga agggctggac
     1681 ggctcacgtt ttgtcgtgaa taatccaaat gcaagctcaa cctgtggttg tggttcttcc
     1741 tttagcattt aattcactcg aattattgcc ttattcaata tcagtctcac aagtaaattt
     1801 tttactaaaa atgaccgttt gtattaaaca aaatagccta acttattgag tttaggctat
     1861 tttttatcat tatgtttgca gttgccttta caacaaagtg ggacaggatc ttcgcctccc
     1921 tcactcaaag ggttgcaacg cagaatacgc ttaaacgcta aatacccacc tttaattgct
     1981 ccgtggattt taatcgcttc gaccgcatag gtggagcagg ttgggtaaaa tcggcaacgt
     2041 gggccaatca atgggctgat agcatagcga tagaaataaa tcggtagcaa tagaattttg
     2101 gctaataggc tgagacgagg tggctgattt atggattctg ttgtgccggc tttttgctca
     2161 ggcgaatgtg tcttgaccat agtttttcca atgtttcaaa cagcgttgcg ttgtctaatt
     2221 tgccaatgcc gccttttgcc acaaatacaa aatcgaaatt cggcaattcg tgttgcttga
     2281 ggcgaaaact ttcacgcact atccgcttaa tgcgattacg gtcgtgagcc cgttttaaat
     2341 gttttttggc aacagttaag cctagacgag gattttctag attattctct ctagcaagaa
     2401 gagtcatttg gggtgtgctg gctcgaagtg gctcttcaaa caccgcctta aattgaacgg
     2461 gagctaacaa acgtagctcc cgagagaaat ttagcttctt cacacttaat cagaaaggtg
     2521 ttttggctgg ttctgcaatt atgcagataa agatttacga cctttagcac gacgacgcgc
     2581 taacacttga cgaccgtttt tagtagccat acgagcacgg aaaccgtgag tacgagcacg
     2641 ttttaatact gatggttgaa atgtacgttt cattgcttat ctacctaaaa tttaaaaagt
     2701 tggcataaaa tggtttctgc caaacaagga ccataaaaaa gagttgcaat tctacaggca
     2761 attaaaataa aaagcaagaa acaatccaag cacaactcgg gttgtttgca aaatttttga
     2821 aaaatacgac cgcttgttat aatcgcagaa atttatattg gtttgtggca taatcgaaaa
     2881 aatattaact attgatgaga aatagaacaa tgaatcaacc ccaacaaata ggtattttgc
     2941 tggctaattt aggtacgcca gatgaaccca cgccaagtgc ggtgaagcgt tatttaaagc
     3001 aatttttaag cgatcctcgt gtgatcgatc taccaaaatt taaatggcaa gcaatcctaa
     3061 actgcatcat tttgccaaga cgttcgccaa aagtggcaaa attatatcaa tcagtatgga
     3121 gcgaagaagg ctcaccgtta ttggcgattt ctcggcaaca acaacgagcg gtacaacgct
     3181 attttgatgc caaaggcaaa aatgtggtgg tggaattggg aatgtcttac ggcaatccaa
     3241 gtattgaaag tgcgaccgat aacctcatca agcagggggt tgagcggatt attgtgctac
     3301 cgctttatcc gcaatacagt agcactacta ccgcttcggt gtttgatgcg tttgccaacg
     3361 gtttaaaagc acagcgtaaa atcgtgccgt ttgattttat tcacagctat cataacgatc
     3421 cgctttatat tcaagcgttg gctaactcta ttgatgttaa acctgacgag ttattactgt
     3481 tttcatttca cggcattcct aaacgttatg aaacggaagg tgatttttac gccaagcatt
     3541 gccaagaaac agcagaatta gtggctgaaa agctaggtct gccaagagaa aaatggtatt
     3601 tgtctttcca gtcccgtttt ggtgatgaag agtggctaca gccttatacc gatcaaaccc
     3661 ttgaaagctt cccacaaaaa gggataaaaa aagtggctgt cgtttgcccg ggcttttcag
     3721 cagattgttt ggaaacctta gaagaaatta cagaagaaaa ccgcgagaac tttgaacatg
     3781 ccggcggaga atcttatcgc tacattccag cgttaaatgc gagtggcgat catatcaagg
     3841 cattagtaaa attaatcgaa gcgaaaatat aatataattt gggcggataa taaatccgcc
     3901 cattt
//
LOCUS       DANLXD010000155         3832 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.156, whole genome shotgun sequence.
ACCESSION   DANLXD010000155 DANLXD010000000
VERSION     DANLXD010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3832)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3832)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3832
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.156"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(89..1024)
                     /gene="ftsX"
                     /locus_tag="PXD18_002437"
     CDS             complement(89..1024)
                     /gene="ftsX"
                     /locus_tag="PXD18_002437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HDL6302811.1"
                     /translation="MIRSFSKLGAQTNYSLRAVWQDLMQRKLGTFLTVLVIAVSLTIP
                     TVSYLLWKNTHEAATQFYPEPQLTVYLHKNLAEHDVNTVVDRIRAFETDKIESFNYIS
                     RQQSLDEFRSWSGFGEALDILDENPLPAVVTLKPKANFNNADTMVELRNGLQQIKGVQ
                     EVRLDNGWLEKLTALTWLIARIAVVCTLLMLLAVFLVIGNSVRTDVANSKAAIEVQQI
                     LGATDHFIARPFLYTGMIYGLFGSLLAVLFSAVTISYFTGVVKYVTDMFTVQFELNGL
                     DFSEAFFLVVLCVFIGWLSAKIATMRNIFRIGSRG"
     gene            complement(1034..1687)
                     /gene="ftsE"
                     /locus_tag="PXD18_002438"
     CDS             complement(1034..1687)
                     /gene="ftsE"
                     /locus_tag="PXD18_002438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HDL6302812.1"
                     /translation="MIKFTNVNKVYKGGKPALQGIDFHLPAGGMAYITGHSGAGKSTL
                     LKLIMGIERANGGQILFNGHDITRLAHHELPFLRRQIGMVHQDYRLLTDRTILDNVAL
                     PLIILGMNQAIVEREARIALERVGLADKANYLPLHLSGGEQQRVDIARAIVHRPTLLL
                     ADEPTGNLDEKLSFEIFRLFEEFNQAGTTVLIATHDTNIISKRPKPCLVLEQGHLKF"
     gene            complement(1680..3176)
                     /gene="ftsY"
                     /locus_tag="PXD18_002439"
     CDS             complement(1680..3176)
                     /gene="ftsY"
                     /locus_tag="PXD18_002439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HDL6302813.1"
                     /translation="MSEKKKGFWSWLGFGKKEEAEQKEIQQEQESIQPEQPVIVEPET
                     EKSFSEKLDELEDKIEEKVDQLEDYFEEKEEKIEQFAEQVEDTIEQKVEDFKEFVEEK
                     VEEAKAFFDDVEDKIEQTFEEQKGEQAVENLQNIATEQLDLNEQEQVTYQVEEAVAEE
                     VAETELVNNVQDTVEESTIQDEYQEKPSQGGFFSRLIQGLIKTKQNIGSGFRNFFRGK
                     KIDDELFEELEEQLLVADLGMPTTQKIINNLTQHATKQQLKDADLLYQQLKVELGEVL
                     KPVAQPLVLEAKKPYVILMVGVNGVGKTTTIGKLARKFQQEGKSVMLAAGDTFRAAAV
                     EQLQVWGERNNIPVVAQSTGSDSASVIFDAMQSAAAKGIDVLIADTAGRLQNKNNLMD
                     ELKKIVRVMKKYDETAPHEIMLTLDAGTGQNAISQAKLFNEAVGLTGITLTKLDGTAK
                     GGVIFAIADQFNIPIRFIGVGEKIEDLRPFNAEEFIEALFSHEDEQND"
     gene            3255..>3832
                     /gene="rsmD"
                     /locus_tag="PXD18_002440"
     CDS             3255..>3832
                     /gene="rsmD"
                     /locus_tag="PXD18_002440"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HDL6302814.1"
                     /translation="MKKNRNSPQSVQQMGEVRVIAGLWRGRKLPVLNAEGLRPTTDRV
                     KETLFNWLMHDIAHSRCLDCFAGSGSLGIEALSRQAQAVVFLEKFANAANQLKKNLQA
                     LKSEQGSVIHTDTLAYLAQKNNGEPFNIVFIDPPFHQGFVPQVLNLLAENNWLAPNAI
                     LYVETEKNHPPLELPQGWQILKEKAAGMVVSRL"
BASE COUNT         1069 a          925 c          695 g         1143 t
ORIGIN      
        1 agcaataata tattgcttat agtaaaaaac caagttccta ggaactggtt tttatctgca
       61 attatttctc taaaaacaac cgcttgtatt agcctctact accaatacgg aaaatatttc
      121 gcattgtcgc aatttttgcc gacagccagc caataaacac acaaagcacc actaagaaga
      181 aggcttcgct gaaatctaat ccgttcagtt caaattgtac ggtaaacata tcagtcacat
      241 acttcactac accggtgaaa tagctaatcg ttaccgcact aaacagcacc gctaacaggc
      301 tgccaaacaa gccgtaaatc atacctgtgt ataaaaacgg acgggcaata aagtgatcag
      361 ttgcccctaa aatttgttgg acttcaatcg ctgctttgct attggcaaca tcggttcgca
      421 cactgtttcc aatcactaaa aaaactgcca acagcattaa taaggtacac accaccgcaa
      481 tacgagcaat cagccaagtt agagcagtta atttttccag ccagccgtta tctaaacgaa
      541 cctcctgcac ccctttaatt tgttgcaaac cgttgcgtag ctccaccatc gtatcagcat
      601 tattaaaatt tgctttcggt tttaaggtaa cgaccgcagg caacgggttt tcatctaaaa
      661 tatctaacgc ttcaccaaag cctgaccaag aacgaaattc gtctaaactt tgttggcgag
      721 aaatatagtt aaatgactca attttatccg tctcaaaagc acgaatgcga tcaacaacgg
      781 tattcacatc gtgttctgcc aaatttttgt gcagataaac ggttaattgt ggctcagggt
      841 aaaattgtgt tgctgcctcg tgggtattct tccaaagtaa ataactcacg gttggaatcg
      901 taagtgagac cgcaatcacc agcaccgtca gaaaagtgcc gagcttgcgt tgcattaaat
      961 cttgccaaac cgctcttaaa gagtagttgg tttgagcacc taatttacta aatgaacgaa
     1021 tcataatatt tccttaaaat ttaagatgcc cttgctccag cactaaacac ggctttggac
     1081 gctttgaaat aatattggta tcgtgggtgg caatcagcac cgttgtgccg gcttgattaa
     1141 attcctcaaa caaacggaaa atttcaaacg agagcttttc atctaagttt ccggttggct
     1201 catcggctaa taacagcgtt gggcgatgaa caatggccct ggcaatatcg acacgttgtt
     1261 gctcaccgcc ggaaaggtgc aacggcagat agttcgcttt atctgccaag ccaacacgct
     1321 caagggcaat gcgggcttca cgctccacaa tcgcttggtt cattcccaaa ataatcaatg
     1381 gtaatgcgac attatccaaa atggttcggt cggttaataa gcgataatct tgatgcacca
     1441 tcccgatttg gcggcgtaaa aacggcaatt catgatgagc aagtcgggta atatcgtgtc
     1501 cgttaaacaa aatttgcccg ccattggcac gctcaatccc cataattaat tttaatagcg
     1561 tgcttttccc cgcaccggaa tgcccggtaa tatatgccat tccaccggca ggtaggtgga
     1621 aatcaatgcc ctgtaaggct ggctttccgc ccttataaac cttgttcaca ttagtgaatt
     1681 taatcattct gttcgtcctc gtggctaaat aaggcttcaa taaattcttc tgcattaaac
     1741 gggcgtagat cttcaatttt ctcgcccacc ccaataaagc ggatcggaat attgaattga
     1801 tcggcaatcg caaaaatcac gccacctttt gccgtaccgt ctaatttagt taaggtgata
     1861 ccggttaaac ccactgcctc attaaacaat ttcgcttggc tgatcgcatt ttgcccagtg
     1921 ccggcatcaa gcgtaagcat aatttcgtgc ggtgcggttt catcatattt tttcatcacc
     1981 cgcacaattt tcttcaactc gtccatcagg ttatttttgt tttgcaaacg ccctgcagta
     2041 tcagcgatta gcacgtcaat cccttttgcc gcagcggatt gcatcgcatc aaaaatcacc
     2101 gaggcagaat ccgaaccggt gctttgtgcc accaccggaa tgttatttcg ctctccccaa
     2161 acctgtagct gttcaactgc cgccgctcgg aacgtgtctc ctgctgctaa cattaccgat
     2221 ttgccttctt gttggaattt acgggcaagt ttgccaatgg tagtggtttt ccccacgcca
     2281 ttcacaccaa ccattaaaat gacatacggt tttttcgctt ccaacactaa cggttgagcc
     2341 accggtttta gcacttcacc cagttccact ttcaactgtt gatacaacaa atctgcatct
     2401 tttaattgtt gcttggtagc atgttgcgtt aaattgttga tgattttttg tgtggtcggc
     2461 atacctaaat ccgccacaag caactgctct tccagctctt caaataactc atcatcaatt
     2521 ttcttgccac ggaagaaatt acggaagccc gaaccaatat tctgcttggt tttaatcaag
     2581 ccttgaatta aacgactgaa gaaaccgcct tgactcggtt tttcttgata ttcatcttgg
     2641 atagtagatt cttcaactgt gtcttgaaca ttatttacta attcagtttc agcaacttct
     2701 tcagccacag cctcttcgac ttgataagta acttgctctt gttcgttgag atctaactgc
     2761 tcagttgcaa tattttgaag attttcgacc gcttgttcgc ctttttgttc ttcaaatgtt
     2821 tgttcgattt tatcttcaac atcatcaaag aacgctttcg cctcttcaac tttttcttca
     2881 acaaactctt tgaaatcttc gactttttgt tcaatggtat cttctacttg ctcagcaaat
     2941 tgctcaattt tttcttcttt ttcctcaaaa tagtcttcta actgatctac cttttcttca
     3001 attttatctt ccagctcatc taatttttca gaaaacgact tctcagtttc cggttcaaca
     3061 ataacaggct gttccggttg aatactctct tgttcttgtt gaatctcttt ctgttcagct
     3121 tcttctttct taccaaatcc aagccaagac caaaaccctt ttttcttctc tgacatattt
     3181 ttctctcatt tctcgtaaaa atagactaaa cttacatagt ctatcaaaaa atcccttatt
     3241 ttcctttagt gagtatgaaa aaaaatcgaa attcccccca atctgttcag caaatgggcg
     3301 aagtacgggt tatcgccgga ctgtggcgag gcagaaaatt acctgtacta aatgccgagg
     3361 ggcttcgccc gacaaccgat agagtaaaag aaacgctgtt taactggtta atgcacgaca
     3421 ttgctcactc acgctgtctt gattgctttg caggcagtgg ctctctgggc attgaagccc
     3481 tttcccgcca agcacaagcg gtcgtttttt tggaaaaatt tgcaaatgct gccaaccagt
     3541 taaagaaaaa tctccaagca ttaaaatccg aacaaggtag cgttattcac actgacaccc
     3601 tcgcctattt agcacaaaaa aataacggtg agccatttaa catcgtattt atcgatccgc
     3661 cttttcatca agggtttgta cctcaagtgc taaacttgct ggcagaaaat aactggctcg
     3721 ccccgaatgc gattttgtat gtggaaaccg agaaaaatca cccgccatta gagctaccgc
     3781 aaggctggca aattttaaag gaaaaagcag ccggaatggt ggtaagccgt ct
//
LOCUS       DANLXD010000156         3732 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.157, whole genome shotgun sequence.
ACCESSION   DANLXD010000156 DANLXD010000000
VERSION     DANLXD010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3732
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.157"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(157..1659)
                     /gene="ppx"
                     /locus_tag="PXD18_002441"
     CDS             complement(157..1659)
                     /gene="ppx"
                     /locus_tag="PXD18_002441"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HDL6302815.1"
                     /translation="MSSNIAPREFAAIDLGSNSFHMIVARIVNGSIQVLSRLKRRVRL
                     ADGLDENLVLSQDAIDRGIACLALFAKRLEGFSAENVKVVGTYTLRRAINNQAFLEQA
                     KAVFPYPISIISGQQEARLIYSGVSHTQPETGRKLVVDIGGGSTEMTIGDDFTPIRAE
                     SRHMGCVSFAKRFFPQGELTIERFDSAYQLAMEKIEDLMWEYKELGWDYALGSSGTIK
                     TVHQVLIANGYRDGLITESRLQKIIDICLEFKSLNEIKLRGLLDERADVLVPGLAILL
                     ALFHTFRIDVLRYSNGALREGVMYGLEKSFQVGDIRQRTAEALAEQFALDKQQAKRVE
                     HTALILFDQIKTWKNRRQVQDLRSMLKWASLLHEIGIVVNHNNVHRHSAYLIANRDLP
                     GFDFEQQTLLSVLMRYHLKGFKRSDIRSINRYQCRDVLTLVRVFRLAVLLNRSRQATV
                     VPKQLNLVIENNAWQLTFEQGFLANNPLISIDLEEEQKILASTNLQFAVS"
     gene            1855..2184
                     /locus_tag="PXD18_002442"
     CDS             1855..2184
                     /locus_tag="PXD18_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF496 family protein"
                     /protein_id="HDL6302816.1"
                     /translation="MSEVNKSFHDMLEYVHLYRLKNKLHRETADNDRKIRDNQKRVLL
                     LDNLTQYITDEMSIEEVRAIISNMRDDYENRVDDYMIRNAELSKQRREIRQKMASHKQ
                     APTNKKA"
     gene            complement(2248..3678)
                     /locus_tag="PXD18_002443"
     CDS             complement(2248..3678)
                     /locus_tag="PXD18_002443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIBC"
                     /protein_id="HDL6302817.1"
                     /translation="MSTLTYLQKIGRALMVPVAALPAAALLMGIGYWIDPDGWGTNSQ
                     LAALLIKSGAAIIDNMSILFAVGVAFGMSKEKDGAAALSGLVGYLVITTLLSPGTVAQ
                     LKGIAVDQVPAAFGKINNQFIGILVGVISAEIYNRFYQVELPKALSFFSGKRLVPIVV
                     SFILLYVWPVIFGALVSFGESIKDMGALGAGIYAFFNRLLIPVGLHHALNSVFWFDVA
                     GINDIPNFLGGAKSLAEGKAVIGVTGMYQAGFFPMMMFGLPAAALAIYHSAKPAKKMQ
                     VASIMFAAALASFFTGITEPLEFAFMFVAPVLYVVHALLTGLSVYIAASMEWIAGFGF
                     SAGLVDLVLSTRNPLAVQWYMLLAQGIVFAVIYYVLFRVVIQAFNLKTPGREEDSEVQ
                     TVNTVSRSEQAAKFVEALGGKENITSIDACITRLRLTLNDTAKADETKLKALGSKGNI
                     KLGENGYQVILGPEAEFVADAMKKLN"
BASE COUNT         1218 a          852 c          647 g         1015 t
ORIGIN      
        1 taaaatatat aatctcaata agcaaacatc aaaaatgaga agttgatcaa attttaaaaa
       61 atactttttg caaaaaatta gctaaatttg accgcttgtt cgcaaaaggg aatgcaataa
      121 acgaaaaagg aagccttcgc ttccttcatt taaatgttaa gagaccgcaa actgaagatt
      181 tgtactcgcc aatatttttt gctcttcttc taaatctatt gaaatcagtg gattattcgc
      241 taagaagccc tgttcaaagg taagttgcca agcattattt tcaatcacca aattcaactg
      301 tttcggcact acagtcgctt ggcgagaacg gtttaatagc accgctagcc ggaaaacccg
      361 taccaacgtt aatacatctc tacattggta acggttgata ctacgaatat ccgagcgttt
      421 gaatccttta aggtggtatc gcattaatac cgatagaagg gtttgctgtt caaaatcaaa
      481 tcccggtaaa tctcggtttg caatcaaata agcagaatga cgatgcacat tattgtggtt
      541 tacaacaata ccaatctcgt gtaataaact tgcccatttc agcattgaac gcagatcttg
      601 cacttggcgg cggttcttcc aagttttgat ttggtcaaat aaaatcaacg ccgtatgctc
      661 cacccttttt gcttgctgtt tatctaaagc aaattgctca gctaacgctt ctgcagtccg
      721 ttggcgaata tccccaactt ggaaactttt ctccaaacca tacattaccc cttctcttaa
      781 agccccgttg gaataacgta atacatcaat tctaaaagtg tgaaaaagtg ctaaaagaat
      841 agctaagccc ggaactagca catctgctcg ttcatcaagt aagcctcgta gcttaatctc
      901 atttaacgat ttaaactcta ggcaaatatc aataattttc tgtaggcggc tttctgtaat
      961 taagccatca cgatagccat tggcaatcag cacttgatgg acggttttaa tcgtaccgga
     1021 agaacctaaa gcatagtccc aacctaactc tttgtactcc cacattaaat cttcgatttt
     1081 ttccattgca agctgatagg cactatcaaa acgctcaatc gttaattccc cctgcgggaa
     1141 aaagcgtttt gcaaaactca cacaacccat atgacgactt tccgctcgaa tcggggtaaa
     1201 gtcatcacca atagtcattt ccgttgaacc accgccaata tctaccacta attttctgcc
     1261 agtttcgggt tgggtatggc taacgcccga ataaatcagc ctcgcctctt gttgtccgga
     1321 aataatggaa atcgggtaag gaaatactgc tttcgcttgc tccagaaaag cttggttatt
     1381 gattgctcta cgtaaggtat aagtgccaac caccttcaca ttctctgcag agaacccttc
     1441 taaacgtttt gcaaataaag ctaaacaagc aatgcctcta tcaatcgcat cttggcttaa
     1501 tactaagttt tcatcaagcc catctgccag ccgtacacgc cgtttcaaac gggaaagcac
     1561 ttgaatggaa ccatttacga tacgggctac aatcatatga aagctgttcg agcctaaatc
     1621 aatagctgca aactctctag gagcaatatt tgatgacata atgaaaccct gtaccaataa
     1681 ctgaaataag taagatatta ccatttttga gccctagata tcactacaaa tttagcgtta
     1741 ttcgcgagaa ttaatttaaa tcataaaatg tgataaattt ttttgacgaa ttgacggaaa
     1801 aagaatagga tttacgagct tacttaattc aacactacat caagggagat tgatatgtct
     1861 gaagtgaata aatcattcca cgatatgctg gaatatgtgc atctttatcg tctaaaaaac
     1921 aaactgcacc gtgaaacggc ggataatgat cgcaaaattc gagataatca gaagcgtgta
     1981 cttttattag ataacctaac gcaatatatt accgacgaaa tgtctatcga ggaagttcga
     2041 gcgattattt ccaatatgcg tgatgactat gaaaatcgag tagatgatta tatgatccgt
     2101 aatgcggaac tttccaaaca acgccgtgaa atccgccaaa aaatggcctc tcacaaacaa
     2161 gcaccaacca ataaaaaagc ataaaaagcc aagcggtctg atttgcaaaa aaatatgcaa
     2221 atcagaccgc ttgtgattaa gcagagatta attcagcttt ttcattgcat ctgccacaaa
     2281 ttctgcttcc ggtcccaaaa tcacttggta gccattctcg cctaatttga tattaccttt
     2341 tgaccctaac gctttcaatt tggtttcgtc tgctttcgcc gtatcattta aggttaggcg
     2401 taagcgggta atacaagcat caatgctggt aatattctct ttaccaccta atgcttcaac
     2461 aaatttggca gcttgttcgc tacgagaaac agtattcact gtttgtactt cgctatcttc
     2521 ctcacgcccc ggcgttttta aattaaaggc ttggatcact actcggaaca atacatagta
     2581 aattactgcg aatacgatac cttgggccaa taacatatac cactgcactg ccagcggatt
     2641 tcgtgtcgat aacactaaat cgaccaaccc tgcactaaaa ccgaaaccgg caatccattc
     2701 cattgaggct gcaatataaa cagataatcc ggttaataat gcgtgaacca cataaagcac
     2761 aggtgcaaca aacataaagg caaattcaag cggttccgta atgccggtga agaacgaagc
     2821 taaagcagca gcaaacataa tagaggctac ttgcattttc ttagccggtt tcgcactgtg
     2881 gtaaatagct aatgctgccg caggtaagcc aaacatcatc atcgggaaga aaccagcttg
     2941 atacatacct gttactccta tcactgcttt gccctcagcc aatgattttg ccccacctaa
     3001 gaagtttgga atatcattaa tgcctgcaac atcaaaccag aaaaccgagt ttaatgcgtg
     3061 gtgtaatcca accggaatta ataaacgatt aaagaaagca taaatacctg cccctaacgc
     3121 ccccatatct ttgatagatt ccccaaaaga gactaaagca ccaaaaataa ccggccagac
     3181 ataaagcaag ataaatgaca ccacaatcgg caccaatcgt ttaccgctaa agaaagacaa
     3241 tgctttcggt aactctactt ggtagaaacg gttataaatt tcggctgaaa taacccctac
     3301 taagatcccg ataaattggt tgttgatttt accgaatgct gcaggcactt gatcaactgc
     3361 gatccctttt agctgagcaa cggtccccgg agacaacaaa gtggtaatta ctaaataccc
     3421 gactaaaccg gataatgctg ctgccccatc tttttctttt gacataccaa atgccacacc
     3481 cacggcaaat agaatagaca tattatcaat aattgccgcc ccagatttaa tcagcaatgc
     3541 cgctaattgg ctatttgttc cccagccgtc cggatcaatc caatagccta tacccatcaa
     3601 taatgctgct gctggtaatg cagcaaccgg caccattaat gcacgcccaa ttttttgtaa
     3661 ataggttaat gtactcataa aagcctccaa aaatacctca taatgagtaa cttaagcata
     3721 gaaaaaaacc ga
//
LOCUS       DANLXD010000157         3705 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.158, whole genome shotgun sequence.
ACCESSION   DANLXD010000157 DANLXD010000000
VERSION     DANLXD010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3705)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3705)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3705
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.158"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            13..2088
                     /locus_tag="PXD18_002444"
                     /pseudo
     CDS             13..2088
                     /locus_tag="PXD18_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249230.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
     gene            2132..3568
                     /locus_tag="PXD18_002445"
     CDS             2132..3568
                     /locus_tag="PXD18_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3327 domain-containing protein"
                     /protein_id="HDL6302818.1"
                     /translation="MKKTTACILTFLVSSVLYANNITIELKQNDFVQGKLIQKAQQPL
                     SLSIIFPDQSSRLLAQNVFGEQDFMFKSELIGTATFSILANGATVSDQDFTLTIERHI
                     PISAQIAPPKVIENTQLEELSQKIAKNPEKQTALINDFWDKAKQAGTPLIEPLDEQQS
                     RVTFLWRGATKNARIWGGVSTEHDFMQRFGETDIWYKSYIVPNDTLVEYKLAPDVPTL
                     PVDENTQRRALLATAQADPLNKTAYFEKIGQNIHNTDKFNYASLLKLPNAPTQSFLTE
                     APNIAKGKLQQLIFESATLGNKHRLFVYLPDGFSAEKNYAVLYLFDGVEYTERVPTKT
                     ILDNMIAQKVILPTVAVFIENPSSESRRVELPANPIFTQVLAKELVPFVEKQLNIKTK
                     ERIIGGSSYGGLSSAYTVLNYPNVFSKALILSGSFWWQPKGTPSEQSHYIAQQFIQKE
                     KLPLCFFISAGFYESGKSAICKRSNYFA"
BASE COUNT         1227 a          745 c          695 g         1038 t
ORIGIN      
        1 aaggataaac taatgaaaat aaaaaaatat tcactttctc taatcacttt agcgattgta
       61 gctcctcaag tattagcaga aacaacctct caagcagaac taaatgctat tgaggtcaaa
      121 gagaaattgg cagctaccac cggctatatt cctgtttata cgactgtagg aacgaaaaca
      181 ttaacctctt tggctcgtac accttttagt atcaatgttg tctctgatga tttaatgcat
      241 gaccaagctg ttcgttctgt taccgattca gtggcttata cctccggtat gatgggtggc
      301 tatcgtggta acaattcgct tatcgaaatc tccattcgag gcattggcaa taaaagtgat
      361 ggcagtacaa ttccgaccta tttaaacggt tctcgctacc aaactgcatt tgaaatcgat
      421 ccgttcttct tagaaagtat caatgtgatt aaaggtccaa actccatttt atacgggcaa
      481 gctaatcccg gtggcgtaat ggatattatc accaaaaaag ccggcagtaa cccacatcgc
      541 catttgcaat ttgtggtggg aaaccatcaa cgataccaaa tcgggctgga tattgaagaa
      601 aatctctcca ataccttatc cgctcgttta atcggtcaat tagaacgaac aaactggaat
      661 acctaatttg taaaagaaaa aggcggtgct tttgctccaa gcattttatg gaaaccgact
      721 acaaatacag aacttaatgt ttacgcttac tatgcaaaaa aaccgaaagc cggtgatcgt
      781 aactttttac cgaaagaagg aacgattaat agcgtaaacg ggaaggaact accctatgat
      841 atgttcctca gcgatctgaa ctatcacggt ttaaaagccg aacaaatgca agtaggttac
      901 agtttctcac ataaatttac gccaaaccta acgttccgcc aaaatgcaag ttaccataat
      961 ggcgaagaga atttcaaaaa tctagtttat tggggcgatg tcggttcggt tttagaacgt
     1021 agagctcgcc attgggatgt caaaacccaa gaaatcaact tagataacca attagaatgg
     1081 gtatttagca cagcaaatat aaatcatacc ttgttagccg gtattgatta taaacgagtg
     1141 cgtaaagatc ttgataacta tatggggatt gcccctgatt ttgattggca gaaccctgtt
     1201 tatggcgtga ccgttactga gcctagctta ttttcaagtg aagtgaagca tttaaaacaa
     1261 cttggggttt atctacaaga tcaaatagaa atcggtaatt ttgacttcct gttaggcggt
     1321 cgttacgatc gagcaaaaaa cagcaaccaa gatcgtttga acagtaaaac agagaataac
     1381 caagaaggaa aatttacttg gcgtacaggc gtagtttaca actttgaaaa cggtatcgct
     1441 ccgtatatca gctacagcac ttcttttgtg ccatcggctg aaaaagatgc tcaaggaaat
     1501 ttcttaaaac caacaactgc tgggcaatgg gaagtgggaa tgaaatacca acctacccaa
     1561 gacaccttac tgaccttagc aggatttaaa attacacaaa aagatttagc caattatcaa
     1621 tggcaaaccc gctcttatga gcaaattggt gaagtgcaaa ccaaaggaat tgaagtgagt
     1681 ttaaatcagc aattatccga taaattttca atagcggctt cttatgctta cttaaaaaaa
     1741 gagattactg cagataaaga tggcacgacg attggaaaaa cgcagtgggg agtgcctcgc
     1801 catcaagcat ctctttgggc aaaatataaa ttctttgata agctgaccgc cggtgtaggt
     1861 gtacgctata tgggaacgac ttttggcgat aaccaaaata cttttaccgt accggcatac
     1921 acactttacg atatgatgct agcttatgat tttatgccta acttaaactt acagctcaac
     1981 gcacaaaacc tgacgaataa aaaatatgtc gcaagctgtg ccaataattt ttcctgtttc
     2041 tatggaaaag atcgcaattt aagtgcaacg ttaaactatc atttttaatc tcaacagccc
     2101 tcaaatgagg gcttaaactt ttgcaaaaaa tatgaaaaaa acgaccgctt gtattcttac
     2161 ttttttggtt tcatctgtgc tttatgctaa caatataacc attgagctta aacagaatga
     2221 ttttgtgcaa ggcaaattga ttcagaaggc tcaacagcca ctttccttgt cgattatttt
     2281 tcctgaccaa agctctcgcc tgctggctca aaatgtcttt ggtgaacaag attttatgtt
     2341 taaatcagaa ctaatcggca cagctacttt ttctattcta gcgaatggtg caaccgtttc
     2401 agaccaagat tttaccttaa cgattgagcg gcatattcca atctcggcac aaattgctcc
     2461 acctaaagta attgaaaata cacagcttga agaactcagc caaaaaattg caaaaaatcc
     2521 agaaaaacag accgctttaa ttaacgattt ttgggataaa gcaaaacaag ccggcacacc
     2581 attgattgaa ccattggacg aacagcaaag ccgtgtaact tttttatggc gtggagcaac
     2641 gaaaaatgcc cgtatttggg gcggtgtgag tactgaacac gattttatgc aacgctttgg
     2701 tgaaacggat atatggtata aaagttatat agtgcccaat gacactttag tggaatacaa
     2761 attagctcca gatgtgccga cattgcccgt tgatgagaat acccaacgca gagcgttact
     2821 ggctacggct caagccgatc cactcaataa aacagcatac ttcgagaaaa tcggacaaaa
     2881 tattcataat accgataaat tcaactacgc ttcgctactt aaattgccaa acgcacctac
     2941 tcaatctttt ttgactgaag ctccaaatat tgcaaaaggt aaactgcagc agttgatttt
     3001 tgagagtgca acactcggca ataaacacag attattcgtc tatctgcctg acggttttag
     3061 tgcagaaaaa aactatgcgg ttctctattt atttgatggt gttgaatata ccgaacgagt
     3121 gccaactaaa accattttag ataatatgat cgctcagaaa gtgattctgc ctactgtagc
     3181 ggtgtttatc gaaaatccat cgagtgaatc aagacgtgtc gagctgcctg ccaatcccat
     3241 atttacgcaa gtattggcaa aagaacttgt accttttgtt gaaaaacagc tcaatataaa
     3301 aacaaaggag cgaattattg gcggctctag ctatggcggg ctatcctctg cttacaccgt
     3361 actcaactat cctaatgtat ttagtaaagc attgattcta tccggttcat tttggtggca
     3421 acccaaaggc acacctagtg aacaaagcca ctatattgct caacaattta tccaaaaaga
     3481 aaaattacca ctctgttttt tcatcagtgc aggtttttat gaaagcggga aatcggctat
     3541 ttgtaagcgg tcgaattatt ttgcatagaa ttacactcaa ttttgcatag ataaaaatta
     3601 aaaactatgc aaaataattg tagaagatca aacctaatct gacagtcccc cgttttaaat
     3661 taccgtgtct gtcagattaa tttgagctta aattcttttc caccc
//
LOCUS       DANLXD010000158         3639 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.159, whole genome shotgun sequence.
ACCESSION   DANLXD010000158 DANLXD010000000
VERSION     DANLXD010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3639)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3639)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3639
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.159"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(10..2862)
                     /locus_tag="PXD18_002446"
     CDS             complement(10..2862)
                     /locus_tag="PXD18_002446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL6302819.1"
                     /translation="MVQAVSFSHFFAIHYFYFFLHKTKGQCTAKPLFSILLFHLFPKN
                     SAKFLLFFYFLVLMVLYSNEVANGKLLITGGTNLNGTLSAEGTSEIILSGRPTPHAYD
                     KVANKEVLIEGDWINRSFNATIFAAKDNGKLEISRNVANINGNFNLTDNATAQIGFTQ
                     GTSQACIRSDRTGVATCNINATLSETDLNSWERTKVAGNVSLADNSTFSLGSKADLTG
                     SITAQESTKVQLNDGSIANLTGLSTTGIFNGANGSTVNLSGVWTTLTNTVVDVLNVAN
                     GSQIHLNTPTATKQNTLTANTLTGNGIFKFVADLTKTASDIVTIKDTASGQFSIEIST
                     NGSAHSAQKIKLFETTNEEDFSLNLANEVRSGEYRYHLLKEGNVYYLNPEKEEEPKIT
                     QKGPSETADPLPEYTGDIEHSEKGPGETADPLPEYTGDIEHSEKGSGETAEPLPKYNG
                     NAHLIASELTAQTNAVLGVTTVLDHVIHSEGTQKQNTLTANTLTGNGIFKFVADLTKT
                     ASDIVTIKDTASGQFSIEISTNGSAHSAQKIKLFETTNEEDFSLNLANEVHSGEYRYH
                     LLKEGNVYYLNPEKEEEPKITQKGPSETADPLPEYTGDIEYSEKGPGETADPLPEYTG
                     DIEHSEKGPGETADPLPEYTGDIEHSEKGSGETAEPLPKYNGNAHLIASELTAQTNAV
                     LGVTTALDHVIHSEGTQNWKVWSKTDYQTTEHRSAGYGFNQDANVIHLGLEKALDNQV
                     TLGMILSQSKARNNFDHYYSGKGRLTMLSMYAKKTWQNGVFVAIDTGFGKASNRLTYQ
                     ANTVKLDRSVFVTGLSIGKAWESANVNIIPSFSARYHHLSSAGNQLVDAKIETNAVDL
                     LALQAGLSINKTLELNGLQIKPEIGSYFVDASHGKLRTRFNNLQIEQQMGRYFKQEAG
                     ISANYRNINAGIQAGFLTGNTLNKQRYISFKVTYEW"
     gene            complement(2910..3587)
                     /locus_tag="PXD18_002447"
     CDS             complement(2910..3587)
                     /locus_tag="PXD18_002447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6302820.1"
                     /translation="MNSIIRKEWFTASEVAGMGNLPEQPSNVTRRATKNNWLKRQIEG
                     KRGVAFEYHYSSLPISVQQELGFAQTAVKEEPRTLVAAQTADEMERVPFYNVQASAGF
                     GAFNSEVYAPDDYIGLSKRWLDVRGFYLSYLAFITASGDSMYPTISDGDMLLVNRATT
                     QPKDGKIYVFRQGEQLWVKRVQGIMGGIRLISDNKELYSPIDVIFDETLDFEVIGQVV
                     YIGHEMI"
BASE COUNT          971 a          751 c          701 g         1216 t
ORIGIN      
        1 tctcaatatt taccattcat atgtaacttt gaacgagata taacgctgtt tatttagcgt
       61 attccccgtt aagaaacctg cctgaattcc tgcgtttata ttgcgataat tagcggatat
      121 acctgcttct tgtttaaaat aacgccccat ttgctgctct atttgtaaat tattgaaacg
      181 tgttcttaat ttcccatggc ttgcatcaac aaaatagcta cctatttccg gttttatttg
      241 caggccattt agttcaagcg ttttattaat tgacagacca gcttgaagag cgagaagatc
      301 aacagcgttt gtttcgattt ttgcatctac aagttgatta cctgctgaag ataaatgatg
      361 ataacgggcg ctaaatgatg ggattatatt cacgtttgca gattcccatg ctttaccgat
      421 actaagccct gttacaaata ctgaacgatc taattttact gtatttgctt gataagttaa
      481 gcgattgctt gctttcccaa aaccggtatc tatcgcaaca aaaacaccat tttgccatgt
      541 tttcttcgca tacattgata gcattgttaa gcgaccttta ccgctataat aatggtcaaa
      601 attatttctc gcttttgatt gagataatat cataccaagt gtgacctgat tatctaaggc
      661 tttctctaat cctagatgga taacgttcgc atcttggtta aatccatatc cggcagagcg
      721 atgctctgtc gtttgataat ctgttttaga ccatactttc caattttggg tcccttccga
      781 atgaattaca tgatctaatg ctgtagttac acctaataca gcattagttt gcgcagttaa
      841 ctcggatgcg atcaaatgtg catttccatt gtatttaggt aatggctcag cggtttcacc
      901 cgatcctttt tctgaatgct caatgtctcc tgtgtattca ggtaacggat cagcagtttc
      961 acccggccct ttttccgaat gctcaatgtc tcctgtgtat tcaggtaacg gatcagcagt
     1021 ttcacccggc cctttttcag aatactcaat atccccggtg tattcaggta atgggtcagc
     1081 ggtttcactt ggcccttttt gagtaatttt aggttcttcc tctttctctg gattgaggta
     1141 atacacattc ccttctttga gtaaatggta gcgatattcg cctgagtgca cttcatttgc
     1201 taaattaaga gaaaagtctt cttcatttgt tgtttcaaat aatttaatct tttgggctga
     1261 atgggcgcta ccatttgtgc taatttctat cgaaaattga ccgcttgcgg tgtctttaat
     1321 tgtgactata tcgctcgctg ttttcgtcag atcagcgaca aatttaaata tgccgttccc
     1381 tgtgagggta ttagcggtaa gcgtattctg tttttgggtc ccttccgaat gaattacatg
     1441 atctaatact gtagttacac ctaatacagc attagtttgc gcagttaact cggatgcgat
     1501 caaatgtgca tttccattgt atttaggtaa tggctcagcg gtttcacccg atcctttttc
     1561 tgaatgctca atgtcgcctg tgtattcagg taacggatca gcagtttcac ccggcccttt
     1621 ttcagaatgc tcaatatccc cggtgtattc aggtaatggg tcagcggttt cacttggccc
     1681 tttttgagta attttaggtt cttcctcttt ctctggattg aggtaataca cattcccttc
     1741 tttgagtaaa tggtagcgat attcgcctga gcgcacttca tttgctaaat taagagaaaa
     1801 gtcttcttca tttgttgttt caaataattt aatcttttgg gctgaatggg cgctaccatt
     1861 tgtgctaatt tctatcgaaa attgaccgct tgcggtgtct ttaattgtga ctatatcgct
     1921 cgctgttttc gtcagatcag cgacaaattt aaagatgccg ttccctgtga gggtattagc
     1981 ggtaagcgta ttctgttttg ttgcagttgg agtgtttaaa tggatttggc taccatttgc
     2041 gacattcaag acatctacaa cagtgttggt taaggttgtc cataccccag aaagattaac
     2101 ggttgaacca ttggcgccat taaatattcc tgttgtactc aagccggtta aattagcaat
     2161 acttccatca ttaagttgaa ccttagtgga ctcctgagct gtaattgagc cagttaagtc
     2221 tgctttactg cctaacgaaa atgttgaatt gtcagctaaa gagacattgc cagccacttt
     2281 ggttctctcc cagctgttta aatcagtctc tgataaagta gcgttaatat tacaggttgc
     2341 tacgcctgtg cggtcagagc gaatacatgc ttgtgaggta ccttgggtaa aaccaatttg
     2401 agcggtagca ttatctgtta aattaaaatt accgttaata ttggcaacat tacggctgat
     2461 ttcaagcttg ccattgtctt tagctgcaaa gattgttgcg ttgaacgatc ggttgatcca
     2521 gtcgccttca atcaggactt ctttattcgc tactttatca taggcatgag gtgttggacg
     2581 gcccgataaa atgatttcgc ttgtaccttc tgcagaaagc gtaccgttga ggttcgttcc
     2641 cccagtgata agcaatttgc cgtttgctac ttcattactg tatagaacca ttaaaactaa
     2701 gaaataaaag aataatagga atttggcgga atttttcggg aataagtgaa acagaagtat
     2761 tgaaaacagg ggctttgcgg tgcattgccc ctttgtttta tgtagaaaaa agtaaaaata
     2821 atgaattgcg aaaaaatggc taaaactaac cgcttgtacc attaaaacaa cgaaaaagta
     2881 aaaatgattt aagtagcttt aaatggcgtt taaatcatct cgtgtccaat gtacacaacc
     2941 tgcccgataa cctcaaaatc taacgtttca tcaaaaatca catcaatagg gctgtatagc
     3001 tctttattat cgctgattaa gcgaataccg cccataatgc cttgcacacg tttaacccaa
     3061 agctgctcgc cttggcggaa cacataaatt ttaccgtctt taggctgggt ggtggctcgg
     3121 tttaccaata gcatatcgcc atcactgatg gttgggtaca ttgaatcacc tgaagcggta
     3181 ataaatgcaa gatagctcaa atagaagcca cgcacatcta gccatcgttt acttagccca
     3241 atatagtcat caggggcata cacctcgcta ttgaaagcac caaagcctgc tgaagcctgt
     3301 acattataaa acggcacacg ttccatttca tctgcagttt gggctgccac taatgttcta
     3361 ggctcttctt ttactgccgt ttgagcaaag cctaactctt gctgcacgct tattgggaga
     3421 gagctgtagt ggtattcaaa agcaaccccc ctttttccct ctatttgtct tttgagccaa
     3481 ttatttttgg tagctcttct tgttacattt gatggttgtt caggtaaatt tcccattcca
     3541 gctacttcag atgccgtaaa ccattccttt ctaattatag aattcataaa accccttttg
     3601 aattcaagtg gaattcaaaa aaatttacaa acaaattct
//
LOCUS       DANLXD010000159         3590 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.160, whole genome shotgun sequence.
ACCESSION   DANLXD010000159 DANLXD010000000
VERSION     DANLXD010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3590
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.160"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            134..1936
                     /gene="frdA"
                     /locus_tag="PXD18_002448"
     CDS             134..1936
                     /gene="frdA"
                     /locus_tag="PXD18_002448"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HDL6302821.1"
                     /translation="MQSVNFDVAIIGAGGGGLRAAIAAAEANPNLKIALISKVYPMRS
                     HTVAAEGGSAAVIKDTDSFDNHFNDTVGGGDWLCEQDIVEYFVEHSPIEMTQLERWGC
                     PWSRREDGEVNVRRFGGMKIERTWFAADKTGFHILHTLFQTSIKYPNIVRFDEHFVLD
                     ILTDNGEARGCVAMNMMEGTLVQINANAVVIATGGGCRTYRFNTNGGIVTGDGLSMAY
                     RHGVALRDMEFVQYHPTGLPNTGILMTEGCRGEGGILVNKDGYRYLQDYGLGPETPIG
                     KPENKYMELGPRDKVSQAFWQEWRKGNTLKTAKGVDVVHLDLRHLGEKYLLERLPFIC
                     ELAKAYEGVDPAKAPIPVRPVVHYTMGGIEVDMNAETSIKGLFAVGECASSGLHGANR
                     LGSNSLAELVVFGKVAGENAARRALEVTARNQPQIDAQAKDVVARLHALANQEGNESW
                     SDIRNQMGDAMEEGCGIYRTQESMEATVNKIQELKERYKNISVKDKSSVFNTDLLYKI
                     ELGFILDVAQSIACSAVERKESRGAHQRLDYVERDDVNYLKHTQAYYNAEGTPTIKYS
                     DVKITKSQPAKRVYGAEAEAQEKVKKAAEAQAQQ"
     gene            1952..2683
                     /locus_tag="PXD18_002449"
     CDS             1952..2683
                     /locus_tag="PXD18_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005639269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HDL6302822.1"
                     /translation="MANLDKMTIEVLRYNPESDSEPHLDRYEVPYDSQTSLLDALGFI
                     KDELEPELSYRWSCRMAICGSCGMMVNGKPKLACKTFLRDYSGFMRIEPLANFPIERD
                     LVVDLSHFIDSIEAIKPYIIDNKAPEGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQ
                     FGLNPEFIGPAAITLAHRYNLDNRDNGREERMKLLSSKNGVWSCTFVGYCSEVCPKHV
                     GPASAVNQGKLESAKDYVISMIKPR"
     gene            2693..3085
                     /gene="frdC"
                     /locus_tag="PXD18_002450"
     CDS             2693..3085
                     /gene="frdC"
                     /locus_tag="PXD18_002450"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HDL6302823.1"
                     /translation="MSATKRRPYVRGMKASWWKKLDFYKMYMVREATCLPTVWFCIVL
                     FYGAVALSKGTFTTDFVDFLQNPLVVILNIISLAAMLYHAATLFVMTPAVMSVMVKGK
                     HLPVSVGRNILWAATGVISVIALILVYI"
     gene            3099..3446
                     /gene="frdD"
                     /locus_tag="PXD18_002451"
     CDS             3099..3446
                     /gene="frdD"
                     /locus_tag="PXD18_002451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HDL6302824.1"
                     /translation="MSLDQNPKRSNEPPVWLLFSAGGMVSALFFPVVIFIIGLLLPFG
                     LVSPDNIISFAHTWIGKLAIMVLAIFPMWAGMHRIHHGLHDLKVHTPAGNVIFYGLSI
                     LYTILVIIAVVQI"
BASE COUNT         1058 a          650 c          850 g         1032 t
ORIGIN      
        1 ttttttgagg tagatcacaa aattacattt tttatgttac aaatttgtaa aaataggtta
       61 tctcattgct caaatagtgg cacaatatga ttacttttta atgaattaag ttatttaact
      121 ttcggagtgc attatgcaaa gtgttaattt tgatgtcgcg attataggtg ccggtggtgg
      181 tggcttgcgt gctgctattg cggcggctga agcaaatcca aatctaaaaa ttgctttaat
      241 ttcaaaagtt tacccaatgc gtagccatac ggttgcagca gaaggtggtt cagcggcggt
      301 aattaaagat accgactctt tcgacaatca ctttaatgat accgtcggtg gtggtgactg
      361 gttatgtgag caagatattg tggagtattt tgtagagcat tcgccgattg aaatgacaca
      421 attagaacgc tggggttgcc cttggagtcg tcgtgaagac ggtgaagtga atgttcgccg
      481 ttttggagga atgaaaattg agcgtacttg gtttgcggcg gataaaaccg gtttccacat
      541 tttgcatact ttgttccaaa cttcgattaa atatccgaat attgtgcgtt ttgatgagca
      601 ttttgtgctg gatattctca ccgacaacgg cgaagctcgt ggttgtgtgg caatgaatat
      661 gatggaaggc acacttgttc aaatcaatgc aaatgcagtt gtgattgcaa ccggtggcgg
      721 ctgccgtact tatcgcttta acactaacgg cggtattgta accggcgacg gtttatcaat
      781 ggcgtatcgt cacggtgtgg ctttgcgtga tatggagttc gtacaatatc acccaacagg
      841 tttgccaaat accggtattt tgatgacaga aggttgtcgt ggtgaaggtg gtattttagt
      901 taataaagat ggctaccgtt acctgcaaga ttatggttta ggaccggaaa cacctatcgg
      961 caaaccggaa aacaaatata tggaattagg ccctcgtgat aaggtttcac aagcattctg
     1021 gcaagaatgg cgtaaaggga acaccttaaa aaccgcaaaa ggcgtggacg tagttcactt
     1081 agatttacgc catttaggtg aaaaatattt acttgagcgt ttaccgttta tttgtgaatt
     1141 agcgaaagcc tatgaagggg tcgatccggc taaagcgccg attcctgttc gcccggtggt
     1201 tcactacacg atgggtggta ttgaagtgga tatgaatgcg gaaacctcaa ttaaaggctt
     1261 attcgcagta ggtgaatgtg cttcatcagg cttgcacggt gcgaaccgtt tgggttctaa
     1321 ctcattagca gagcttgtgg tgttcggcaa agttgccggt gaaaatgcgg ctcgccgtgc
     1381 gttagaagtg actgctcgca accagccaca aattgatgca caagcaaaag atgtggtggc
     1441 tcgcttgcac gcattagcga accaagaggg taatgaatct tggtcggata tccgtaacca
     1501 aatgggtgat gcgatggaag aaggttgtgg tatttaccgt acccaagaaa gtatggaagc
     1561 gactgtaaac aaaatccaag agctaaaaga gcgttataaa aacatcagcg taaaagataa
     1621 atcaagtgtg tttaacactg atttactcta caaaattgaa ttaggcttca ttttagatgt
     1681 ggctcaatcc attgcttgct ctgcggtaga gcgtaaagaa tctcgtgggg ctcaccaacg
     1741 tttagactat gttgagcgtg atgatgtgaa ctacttaaaa cacacacaag cgtactacaa
     1801 tgcagagggt acaccgacga ttaaatacag cgatgtgaaa atcactaaat cacaaccggc
     1861 taaacgtgtg tatggtgcag aggctgaagc ccaagaaaaa gtcaaaaaag cagcagaagc
     1921 tcaagcacaa caatagagaa ggagtagtaa aatggcaaat ttagataaaa tgaccatcga
     1981 agtgctacgc tacaaccctg aatcagatag cgagccacat ttagacagat atgaagtgcc
     2041 gtatgacagc caaacttcac ttttagatgc attgggcttc attaaagacg aattagaacc
     2101 ggaactttct tatcgctggt cttgccgtat ggcgatttgt ggttcttgcg gaatgatggt
     2161 aaacggtaag ccgaagttag cttgtaaaac attcctgcgt gattacagcg gttttatgcg
     2221 aattgagccg ctggcgaact tcccgattga gcgtgactta gtagtggatt taagccactt
     2281 tattgatagc atcgaggcaa ttaaacctta tattattgat aataaagcac cggaaggaca
     2341 gcgtactaaa caaacgccgg cacaattaga gaaatatcgt caattctcaa tgtgtatcaa
     2401 ctgcggttta tgttatgcgg cttgcccaca atttggtttg aaccctgaat ttatcggacc
     2461 tgctgcgatt acattggctc accgctataa cttggataac cgtgataatg gtcgtgaaga
     2521 gcgtatgaag ctactcagca gcaaaaacgg tgtttggagc tgtactttcg tgggttactg
     2581 ctcggaagtc tgtccgaaac acgtcggccc tgcttcggct gtaaaccaag gtaaacttga
     2641 aagtgcgaaa gattatgtta tctcaatgat caaaccgaga taggaggaag aaatgtcagc
     2701 aacaaaacgt agaccttatg taaggggaat gaaagccagc tggtggaaaa aactcgactt
     2761 ctataaaatg tatatggtgc gtgaagctac ctgtcttcca actgtttggt tctgcattgt
     2821 attattttat ggagcagttg cgttaagtaa aggaacattt actaccgatt ttgtggattt
     2881 cttacaaaat ccgttagttg ttatcctaaa cataatttca ttggcagcaa tgttatatca
     2941 tgcggcaaca ctttttgtga tgacacctgc cgtcatgtcc gtgatggtta aaggtaaaca
     3001 cttaccagtc tcggttggaa gaaatattct ttgggcagca acaggcgtaa ttagcgtaat
     3061 tgcattaatc ttggtttata tttaagaagg ggaagaaaat gagtcttgat caaaacccaa
     3121 aacgttcaaa tgaaccgccg gtatggttgc tttttagtgc tgggggaatg gtaagtgcat
     3181 tatttttccc tgtggtaatc tttattatcg gtttattact gccattcggg ttagtatcac
     3241 cagataatat catttccttt gcccatactt ggatcggcaa gctcgctatt atggtattag
     3301 cgattttccc tatgtgggca ggaatgcacc gtatccatca tggattacac gacctgaaag
     3361 ttcacacgcc agcaggtaat gtgattttct acggattgtc tatcttatac acaattctag
     3421 taatcatcgc agtcgtgcag atttaaatga gaaagaccat cttgtataaa gcagatggtc
     3481 ttttcatttt taatatgcta acaagcggtc gaatttataa gaaaatttgc aaatattaga
     3541 aattttgccg ataaaacgat cgttttgtat taaatatctg caaaaaagat
//
LOCUS       DANLXD010000160         3529 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.161, whole genome shotgun sequence.
ACCESSION   DANLXD010000160 DANLXD010000000
VERSION     DANLXD010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3529
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.161"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(25..147)
                     /locus_tag="PXD18_002452"
     CDS             complement(25..147)
                     /locus_tag="PXD18_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="entericidin A/B family lipoprotein"
                     /protein_id="HDL6302825.1"
                     /translation="MKKLVLTILAAATFLTACNTVDGVGEDVEKAGDKIQQAAQ"
     gene            complement(227..1204)
                     /gene="rluD"
                     /locus_tag="PXD18_002453"
     CDS             complement(227..1204)
                     /gene="rluD"
                     /locus_tag="PXD18_002453"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HDL6302826.1"
                     /translation="MTQQKILTAEITADLLGARLDQALAQLFPDYSRSRIKVWIESDL
                     VKVNGNIVNKAREKVFGGETVEITAEIEEEIRFEPQDIPLNIVYEDDDIIVINKPKDL
                     VVHPGAGNPDGTVLNALLHYYPPIAEVPRAGIVHRLDKDTTGLMVVAKNIPAQTHLVT
                     ALQKRRITREYEAIASGIMTQGGKVDEPMARHPTKRTAMAVHPMGKPAVTHYRIMERF
                     RNYTRLRLRLETGRTHQIRVHMAHIAHPLLGDQLYGGRPRPPKGASDSFLSVLRGFQR
                     QALHATMLRLEHPITGEMMEWHAPLPDDFIELIQALKADYELYKDQLDY"
     gene            1345..2124
                     /locus_tag="PXD18_002454"
     CDS             1345..2124
                     /locus_tag="PXD18_002454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HDL6302827.1"
                     /translation="MRKFKSLATLVLAGLFVAGCSNSNKELEQSNVQDLYGKGQTYLQ
                     DGDYNSAIRYLEAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPN
                     AANMDYVFYLAGLSNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQY
                     AQDAQNWMNYLFNRLAEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPY
                     LKEAYKQMNIPDAEQKTELLIQEYESKELPNPEKLKYGEQF"
     gene            2197..3228
                     /gene="tsaD"
                     /locus_tag="PXD18_002455"
     CDS             2197..3228
                     /gene="tsaD"
                     /locus_tag="PXD18_002455"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDL6302828.1"
                     /translation="MRILGIETSCDETGVAIYDEDKGLVANQLYSQIDMHADYGGVVP
                     ELASRDHIRKTLPLIQEALKEANLQPSDIDGIAYTAGPGLVGALLVGSTIARSLAYAW
                     NVPALGVHHMEGHLLAPMLEENAPEFPFVALLISGGHTQLVKVDGVGQYELLGESIDD
                     AAGEAFDKTGKLLGLDYPAGVAMSKLAESGTPNRFKFPRPMTDRPGLDFSFSGLKTFA
                     ANTIKANLNENGELDEQTKCDIAHAFQQAVVDTILIKCKRALEQTGYKRLVMAGGVSA
                     NKQLRADLAEMMKKLKGEVFYPRPQFCTDNGAMIAYTGFLRLKNDEQTDLSISVKPRW
                     AMTELPPIN"
     gene            3310..>3529
                     /locus_tag="PXD18_002456"
     CDS             3310..>3529
                     /locus_tag="PXD18_002456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HDL6302829.1"
                     /translation="MNNYVISLTSAQERRKHIEAEFGKQNIPFQFFDAITPDLIKEKA
                     KAFNIDISNTNLTKGEIACALSHIALWHL"
BASE COUNT         1064 a          748 c          687 g         1030 t
ORIGIN      
        1 cttcttagaa ttcgaagctt tttgttattg tgcagcctgc tgaattttat cgcccgcttt
       61 ttcaacatcc tcaccaacac catcaacggt attacacgca gtcaagaaag ttgcagctgc
      121 taaaatagtt aatactaatt ttttcataga aagctccttt tttgttgttt acttatgaaa
      181 acgatttcaa tatagcaact ttacattatt taagcaacac ctaaacttaa taatctaatt
      241 gatctttata aagctcataa tccgctttta gtgcctgaat caattcaata aaatcatcag
      301 gtaacggggc gtgccactcc atcatttcac cagtaatcgg atgctctaat ctcaacattg
      361 tggcgtgtaa ggcttggcgt tggaagcctc gtaacaccga taaaaacgag tcactcgcac
      421 ctttaggtgg gcgaggtcta ccgccataga gctgatcacc taataatggg tgagcaatat
      481 gcgccatatg tacccgaatt tggtgagtac gccctgtttc taatcttaaa cgtaaacgtg
      541 tgtaattacg aaaacgctcc ataatacgat aatgcgtaac cgccggtttt cccattgggt
      601 gaacagccat tgccgtacgt ttagttgggt ggcgagccat tggctcatca acttttccgc
      661 cctgtgtcat aatgccgctg gcaatcgctt catattcacg ggtaatacga cgtttttgta
      721 atgcggttac taagtgagtc tgtgccggaa tgtttttagc cactaccatt aagcctgtcg
      781 tgtctttatc caatcggtga acaatccctg ctcgaggcac ttctgcaatc ggtggataat
      841 aatgtagcaa agcattcagc actgtaccgt ccggattacc agcccctggg tgaaccacta
      901 aatccttcgg tttattaatg acgataatat cgtcatcttc atacacaata tttagaggaa
      961 tatcttgagg ctcaaaacga atttcctctt ctatttcagc ggtaatttca acagtttcac
     1021 caccaaatac tttttccctt gctttattca cgatattgcc attaactttc actagatcac
     1081 tttcaatcca cactttaatg cgtgaacgag aatagtccgg aaaaagttgt gccagagcct
     1141 gatctaggcg agcacctagt aaatctgcag taatttctgc tgttaaaatc ttttgttgag
     1201 tcattaaacc ataaatccta attagtcatt tgcttacttg cgtgatgtta tatagaatag
     1261 cgagatgaac ttcataagtt attcttagtc agaggacatt gtacattaac ttttcgtcct
     1321 agacactttt tataggtaaa acatatgcgt aaatttaaat ctcttgccac attagtatta
     1381 gccggactgt ttgttgcagg ttgttcaaat tcaaataaag aattagaaca atccaacgtt
     1441 caagatcttt atggcaaagg tcagacctat ttacaagatg gagattataa ttctgccatt
     1501 cgctacttag aagcggttgg aaccaaagga ggccaatatt caggacttgg tgagcaaacc
     1561 caactaagtt taatttatgc tcaatataaa gttggcgaat actataaagc acttgatgcc
     1621 gcagaacgtt ttgctcgctc ttacccgaat gcagctaata tggattacgt attctatcta
     1681 gcaggattat caaatgcacg tctaagtgat aattttattc aagacttctt tggtgtaaat
     1741 cgcgcctctc gagccgtaga taatgttcgt aatgcttacg gtaacttcca aactattgta
     1801 cagcgctacc ctcaaagcca atatgcacaa gatgctcaaa attggatgaa ttacttattt
     1861 aaccgtttag cggaacacga attagccgtt gttaaatttt atgatgaacg taatgcctat
     1921 gtggctgtag taaaccgtat cgaagaaatg ttgcgttttt acccgaatac actggcaacc
     1981 aaacaagcat tgccatactt aaaagaagca tataagcaaa tgaatatccc agatgcagag
     2041 caaaaaacgg aactcttgat ccaagaatat gaaagcaaag agctaccgaa tcctgaaaaa
     2101 ctgaagtatg gcgaacaatt ctagtcgtac agagaataat gtgaggggcg ttcttcgccc
     2161 cttttggttt tctaacttat tttgacttct ccaactatgc gaattttagg tattgaaacc
     2221 tcttgtgatg aaaccggtgt tgccatttat gatgaagaca aaggcttagt ggcaaaccag
     2281 ctttatagcc aaattgatat gcacgccgat tacggtggcg tagtccctga actggcttct
     2341 cgagaccata tccgtaaaac gttgccacta attcaagaag ccttaaaaga ggccaatctg
     2401 caaccctcgg atattgacgg cattgcctat actgccggcc caggcttggt cggggcttta
     2461 ttggtcggct caaccattgc ccgttcgctg gcttatgctt ggaatgttcc ggcattgggc
     2521 gttcaccata tggaagggca tttacttgcc ccaatgttgg aagaaaatgc ccctgaattt
     2581 ccgtttgtgg cattattgat ttcaggtgga cacacccaac tggtaaaagt tgacggcgtt
     2641 gggcaatacg aactactcgg ggaatcaatt gatgatgctg ccggtgaagc ctttgacaaa
     2701 acaggcaaac tactcggttt ggattaccct gccggtgtag cgatgtcaaa attagccgaa
     2761 tccggcacgc caaatcgttt taaattccct cgtccaatga ccgacagacc gggactggat
     2821 ttcagtttct ccggtttaaa aacctttgct gcgaatacga ttaaagccaa tcttaatgaa
     2881 aatggtgaac tcgatgagca aaccaaatgc gatattgccc acgcattcca acaagccgtg
     2941 gttgatacta ttttaattaa atgcaagcga gcgttagagc aaaccggcta taaacgctta
     3001 gtaatggcag gcggcgtaag tgccaataaa caattacgag cagaccttgc ggaaatgatg
     3061 aaaaaattaa aaggcgaagt attctaccct cgcccacaat tttgcactga caacggcgca
     3121 atgattgcct acactggctt tcttcgctta aaaaacgatg aacaaaccga cttaagcatt
     3181 agcgtaaaac cccgctgggc tatgaccgaa ttaccaccga ttaattaacc tttcaagcgg
     3241 tgaaatttct tgttaatttt gcaaaaattt aatcaaaaat aaccgcttgc tatatgatag
     3301 attaaattta tgaataatta tgtaattagc ctaacctccg cacaggagcg tagaaaacat
     3361 attgaagctg aattcggcaa acaaaatatt ccttttcaat ttttcgatgc gattacgccg
     3421 gatttaatta aagaaaaagc caaagcattt aatattgaca tttcaaatac aaacttaaca
     3481 aaaggtgaaa tagcctgtgc tttgagtcat attgcattat ggcatttag
//
LOCUS       DANLXD010000161         3521 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.162, whole genome shotgun sequence.
ACCESSION   DANLXD010000161 DANLXD010000000
VERSION     DANLXD010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3521
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.162"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            51..2027
                     /gene="cpdB"
                     /locus_tag="PXD18_002457"
     CDS             51..2027
                     /gene="cpdB"
                     /locus_tag="PXD18_002457"
                     /EC_number="3.1.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2',3'-cyclic-nucleotide 2'-phosphodiesterase"
                     /protein_id="HDL6302830.1"
                     /translation="MLNRRKFIQLGATAMLVLGTQPSAFAQTAKNKAGLRVIATTDIH
                     GFLTDFDYYKDAPTEKFGFTRTASLIKQARAEVKNSVLVDNGDLIQGNPISDYQSTKG
                     AKEGKPEPSIMALNAMQYEVGTLGNHEFNYGLSYLDNAIKQAKFPIVNANIVKPGTDE
                     PFFTPYVIQQKEIVDEKGNKHTIKIGYIGFVPPQVMIWDKANLEGKVEARDIVKTAQK
                     YVPIVKKEGADIVVALAHTGPSDEPYKEGAENCAFYLADVKGIDAVIFGHSHRLFPNK
                     EFANSPNADIAKGTMKGVPESMAGYWGNNISVIDLSLAENDGKWGVVDGRAELRPIYN
                     TEEKKATVENHPEIVALLKETHEATRQFVSQPIGKATDNMYSYLALVQDDPTIQIVNQ
                     AQKAYVENVVKGLPELAGLPILSAGAPFKAGGRKNDPTGYTEVDKGELTFRNAADLYL
                     YPNTLVVVKATGAELKEWLECSAGMFKQIDVASDKPQYLLDWTGFRTYNYDVIDGVSY
                     QFDITQPARYDGECKLINPNSHRVVNLTFDGKPVDPKQEFLIATNNYRAYGAKFPGTG
                     DKHIVFAAPDENRQVLANYITTESKAHGQVSPKADNNWRIAPISSNAKLDIRFETSPT
                     DKAKAFIKENAQYPMEYIENDETGFAVYRIDLTK"
     gene            complement(2100..>3521)
                     /locus_tag="PXD18_002458"
     CDS             complement(2100..>3521)
                     /locus_tag="PXD18_002458"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HDL6302831.1"
                     /translation="DFYKTSHRIQYPEGSQFLYSTFTPRSNIYAPFVTRVVSFGFQAF
                     ILKYLIHYFNDNFFSRSQHDVVSEYTQFISDTLNIEDSGEHIAQLHQLGYLPIRIKAI
                     PEGKSVAVKVPLMTIENTHSSFFWLTNYLETLINVSLWQPITSASIAFAYRKALAEFS
                     EQTCDDNSHLPFQAHDFSMRGMSSLESAESSGAGHLTSFLGTDTIPAISFVTAYYGSQ
                     HLIGTSIPASEHSVMSSHGVDELPTFRYLMAKYPNNMLSIVADTTDFWHNITVNLPLL
                     KQEILARPESAKLVIRPDSGDFFTIICGNNSSPVEHERKGLIECLWDIFGGSINQKGY
                     KVLNPHIGAIYGDGVTYDKMIRILEGLTAKGFASSNIVFGVGAQTYQRNTRDTLGFAI
                     KATSITINGVEKAIFKAPKTDNGLKKSQKGRVKVISYDHYVDELTALDDFSDDLLEVV
                     FENGKLVKSTNFDEIRQNIAQQF"
BASE COUNT         1176 a          664 c          709 g          972 t
ORIGIN      
        1 ttctaaaata ttttacaatt taccctttca tttcattaag gagatatttt atgttaaata
       61 gaagaaaatt tatccagctt ggtgcaactg caatgcttgt attggggaca caaccgtctg
      121 catttgcaca aacagccaaa aataaagctg gcttgcgtgt catcgccact acggatattc
      181 acggtttctt aactgatttt gattattaca aagatgctcc aacagaaaag tttggtttta
      241 cccgtacggc aagcctaatt aaacaagcta gagcagaagt taaaaacagt gtgttagtcg
      301 ataatggtga cttaattcaa ggtaatccta tttctgacta ccagtcaacc aaaggtgcaa
      361 aagagggcaa acctgaacct tcgattatgg cattaaatgc gatgcaatat gaagtcggaa
      421 cgctgggaaa tcatgaattt aactacggtt taagctattt agataatgct attaagcaag
      481 caaaattccc tattgtcaat gcaaacattg tgaagccggg gacagatgaa ccattcttta
      541 caccttatgt tattcaacaa aaagaaattg tagatgaaaa agggaataag cataccatta
      601 agattggtta tatcggtttt gtaccaccac aagtgatgat ttgggataaa gctaatcttg
      661 aaggaaaagt tgaagctcga gatattgtga agaccgcaca aaaatatgtg cctatagtaa
      721 aaaaagaagg ggcagatatt gtcgttgcat tggcacatac cggcccttca gacgaaccct
      781 ataaagaagg cgctgagaac tgtgcgtttt atctagctga tgtaaaaggt attgatgcag
      841 ttattttcgg gcattcacat cgcctgttcc caaataaaga atttgcaaat tcaccaaatg
      901 ccgatattgc aaaaggaaca atgaaaggcg taccggaaag tatggctggc tactggggaa
      961 ataacatcag tgtgattgat ttaagcttgg ccgaaaacga tggtaaatgg ggcgttgtgg
     1021 acggtagagc agagttgcgt ccaatttata atacggaaga gaaaaaagca accgttgaga
     1081 accaccctga aatcgttgca ttattaaaag aaacccatga agcaacccgt caatttgtgt
     1141 ctcaacctat cggtaaagca actgataata tgtatagtta ccttgcgtta gttcaagatg
     1201 accctaccat tcaaattgtg aaccaagctc aaaaagcgta tgtagaaaat gtggtaaaag
     1261 gcttgccgga gcttgcagga ttaccaattc taagtgccgg agcaccgttt aaagccggtg
     1321 gacgtaaaaa tgacccgaca ggctataccg aagtcgataa aggcgaatta actttccgca
     1381 atgcggcaga cttatacctt tacccaaata ccttagtggt ggttaaagca acaggagcag
     1441 aattaaaaga gtggttagag tgcagtgcag gaatgttcaa acaaattgat gtcgcttcgg
     1501 ataaaccgca atatttactg gattggacag gtttccgcac ctataactac gatgtaattg
     1561 acggtgtcag ctatcaattt gatataaccc aaccggctcg ttatgacggc gagtgcaaat
     1621 tgatcaaccc taattcgcac cgtgtggtga acttaacctt tgacggcaaa ccggttgatc
     1681 ctaaacaaga attcttaatt gccaccaaca attaccgtgc ttatggagca aaattcccgg
     1741 gaacaggcga taaacatatt gtgttcgccg caccggacga aaaccgccaa gtgttagcga
     1801 attatattac caccgaaagt aaagctcacg ggcaggtaag tccgaaagcg gataacaact
     1861 ggcgtattgc accaattagc tcaaatgcaa aattggatat tcgttttgaa acctctccaa
     1921 cagataaagc taaagctttc attaaggaaa atgcacaata tccgatggag tatatcgaaa
     1981 acgatgaaac cggcttcgca gtttaccgta ttgatttaac caaataatca gagctaaata
     2041 caagcggtct aatttgcaaa aaaattaaca aatttgaccg cttgtttcat tccatttttc
     2101 taaaattgtt gtgctatatt ttgccgaatt tcatcaaaat tggtcgattt gaccaactta
     2161 ccattttcaa aaaccacctc taaaagatca tctgaaaaat catccagtgc ggttagctcg
     2221 tcaacataat gatcataaga gattactttt actcgccctt tttgcgattt ttttaagccg
     2281 ttatcggttt taggagcttt gaaaattgcc ttttcgacac cgttaattgt aattgaagtc
     2341 gctttgattg caaaacccag cgtatcacga gtattgcgtt gataagtttg agccccaacg
     2401 ccaaacacaa tattgctgga agcaaaacct tttgccgtta agccctctaa aatccgtatc
     2461 attttatcat aagtgacgcc gtcaccataa attgccccaa tatgcggatt aagcacttta
     2521 taaccttttt ggttaatact accaccaaaa atatcccaca aacactcaat cagacctttg
     2581 cgttcgtgtt caacggggga ggaattgtta ccgcaaataa ttgtaaaaaa atcaccgcta
     2641 tcagggcgga taaccaattt tgctgattcc ggtcgagcta aaatttcttg ttttaataat
     2701 ggcaaattaa cggtgatgtt atgccagaaa tcggttgtat ctgccacaat agatagcata
     2761 ttatttggat attttgccat taaataacgg aaagtcggca gctcatcaac accgtgtgaa
     2821 ctcatcaccg aatgttctga tgccggaata gatgtaccga ttaaatgttg agaaccataa
     2881 taggctgtca cgaatgaaat tgcaggaatg gtatctgtgc ctaaaaatga ggttagatgt
     2941 ccggcaccgg agctttctgc tgattctaag gaactcattc cacgcataga gaaatcgtgt
     3001 gcctggaagg gtagatggct attatcatca caggtttgct ctgaaaattc ggctagagcc
     3061 ttacgataag caaatgcaat ggaagctgat gtaataggct gccataatga cacattaatc
     3121 agggtttcca aataattagt cagccaaaaa aagcttgagt gagtgttttc aattgtcatt
     3181 aaaggaactt tcactgcaac agattttcct tctggaatag ctttaattct gataggtaag
     3241 taaccgagct gatgcaattg tgcaatatgt tcgccagagt cctcaatatt caatgtgtca
     3301 gaaataaatt gagtatattc agaaacaacg tcatgttgtg agcgagaaaa aaaattatcg
     3361 ttaaaataat gaatcaagta ttttaaaata aatgcctgaa agccaaatga tacaacacgt
     3421 gtaacaaatg gagcataaat attactacga ggtgtgaatg tactatataa aaactgagaa
     3481 ccttcaggat attgaattcg atgtgaagtt ttataaaaat c
//
LOCUS       DANLXD010000162         3414 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.163, whole genome shotgun sequence.
ACCESSION   DANLXD010000162 DANLXD010000000
VERSION     DANLXD010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3414)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3414)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3414
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.163"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(157..987)
                     /gene="fghA"
                     /locus_tag="PXD18_002459"
     CDS             complement(157..987)
                     /gene="fghA"
                     /locus_tag="PXD18_002459"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014167586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HDL6302832.1"
                     /translation="MQQFENYRCFSGEQQVWQHFSASLNCEMKFAIYLPQSAKTQKLP
                     VLYWLSGLTCTEQNFITKSGFQRYADEHHLIVVAPDTSPRGVNVANDEAYDLGQGAGF
                     YLNATQGEWTTHYQMYDYIVSELPTLINAHFPTNGKQSIFGHSMGGHGALTIAFKNPG
                     QYQSVSAFAPIVAPTQVPWGQKAFLAYLGEDQTAWKAYDSVALLEKYRPSLPILIDQG
                     SQDSFLSDQLKPEIFCETADRLGIPYQFNLRDGYDHSYYFISSFIGEHIAFHAKHLKD
                     "
     gene            complement(1067..2125)
                     /locus_tag="PXD18_002460"
     CDS             complement(1067..2125)
                     /locus_tag="PXD18_002460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HDL6302833.1"
                     /translation="MAYPIKSYATFSATTPLAPHSFERRELLEDDVLIDILYCGVCHS
                     DLHMARNDWGWTQSYPLVPGHEIIGRIIKVGKNAKKFQIGDLVGVGCMVDSCRECSPC
                     QHGLEQYCEVGNIGTYGGIDRFDGTPTQGGYSTCVVVSEDFVLKVSENLDTKAVAPLL
                     CAGITTYSPLRHWNVKAGSKVAVVGLGGLGHMAVKLAKAMGAEVTLFTRSLGKADDAY
                     RLGASRVVLSTDEKQMADVANTFDLIIDTVPYTHDLKPYIPTLALDGTLVLVGLVGEL
                     EQTINTVPMILGRRSISASVIGGIQETQEMLDFCAEHNIVPDVEMIDMQNINDAYERM
                     LKSDVKYRFVIDMGSLKG"
     gene            complement(2312..3247)
                     /locus_tag="PXD18_002461"
     CDS             complement(2312..3247)
                     /locus_tag="PXD18_002461"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03571 family LLM class oxidoreductase"
                     /protein_id="HDL6302834.1"
                     /translation="MNTLSPIFSQVFGQNQLTLGLIAPFMGYQNHIPDNLTTIADNAR
                     LAENLGFSALWVRDVPFYDPHFGDVGQGLDPMVTLGFLSAHTQNIALGTAGLIAPLRS
                     PIHIAKMATSVDSLSHGRFLLGLSSGDRPVEYPAFGADFASRSERFRESIDLINTLTE
                     QDFPHFKGKHYADLTDNLDLLPKPKHRLPIVAIGRARQEMDWLANVPDAWIWHGVNPA
                     DTANIINTLADLRQKDTPTAFGYAQFVEVLDDKNAKAQLFNNIYLRGGAKGLADFWAK
                     EQEKGVKHLALNLKPTQRPADEVLTELAEYALTQF"
BASE COUNT          964 a          741 c          745 g          964 t
ORIGIN      
        1 ttattaaagc acgacttttg ttgtatttca aacctttgtt tttatacaaa acaaccgtgt
       61 tgtaaaaaat gatcgtaaac tgaccgcttg taatgcactc tgaatatatc gaaacatgat
      121 aaaaatgata aagcatgttt cgataattta ctgtctttag tcttttaaat gttttgcatg
      181 aaaggctata tgttcaccga taaagctact aatgaaatag tagctgtgat cgtaaccatc
      241 acgtaaattg aattggtagg gtattccaag tctatctgcg gtttcacaga aaatttccgg
      301 ctttaactga tcgctcaaaa agctgtcttg gctgccttga tcgattagaa ttggcaagct
      361 tgggcgatat ttttccagca atgccacgct atcatacgcc ttccaagcgg tctgatcttc
      421 gcctaaatat gctaaaaatg ctttttgccc ccaaggaact tgggttgggg cgacaatcgg
      481 tgcaaatgcc gatacacttt gatattgccc cggattttta aatgcaatgg ttaaggcacc
      541 atgtccgccc attgaatgcc caaaaattga ttgtttaccg ttagtcggga aatgagcatt
      601 aatcaatgtt ggcagttcgc tgacaatgta atcatacatt tggtaatgtg ttgtccattc
      661 gccttgcgta gcatttaggt aaaatccggc accctgacct aaatcataag cctcatcatt
      721 agcgacattc acacccctag ggctggtatc cggtgcgacc acaatcagat gatgttcgtc
      781 ggcataacgt tgaaagccag atttagtgat gaagttctgc tcggtacagg ttaaaccaga
      841 aagccaatat agtacgggta gcttttgtgt tttagcagat tgcggcagat aaatagcaaa
      901 tttcatttca cagtttaagc tggctgagaa atgttgccaa acctgttgtt caccgctaaa
      961 acagcggtag ttttcaaatt gttgcataat attccttaca agcggtttaa ttccgctgat
     1021 tttttgcaaa aataaaggcg gaactcaccg cctttatatt gtaatatcaa cctttcaaac
     1081 ttcccatatc aatcacaaac cgatatttca cgtctgattt cagcattcgt tcataagcat
     1141 cattgatgtt ttgcatatca atcatttcca catccggcac aatgttgtgt tcggcgcaga
     1201 agtcgagcat ttcttgagtt tcctgaatgc cgccgatgac agaggcggaa atagagcggc
     1261 ggcctaaaat catcggtacg gtgttgatgg tttgctccaa ctcaccgacc aagcccacca
     1321 gcaccaatgt gccgtccaac gctaaggttg ggatataagg tttcaagtcg tgggtataag
     1381 gcacggtatc gatgattaaa tcaaaggtat ttgcaacgtc tgccatttgc ttttcatcgg
     1441 tagaaagcac cacacggctt gcgcccaaac ggtaagcatc atcggcttta cccagtgagc
     1501 gagtaaaaag cgtaacttcc gctcccattg ctttggcaag tttaaccgcc atatgcccca
     1561 gtccgccaag ccccacaaca gcgacttttg agccagcttt gacattccaa tgacgcaggg
     1621 gcgaataggt ggtaatgcct gcacacaaaa gaggggcaac cgctttggtg tccaagtttt
     1681 cagagacttt taatacaaaa tcttcactca ccaccacgca tgtgctgtaa ccgccttgtg
     1741 ttggtgtgcc gtcaaagcgg tcaataccgc cataagtgcc gatgttgccc acttcgcagt
     1801 actgctccaa accgtgctgg caaggactgc attcacggca ggaatccacc atacaaccga
     1861 caccgaccaa atcgccgatt tggaattttt tggcgttttt accgactttg ataatacgac
     1921 cgatgatttc gtgccctggt acaagcggat agctttgcgt ccagccccaa tcattgcgag
     1981 ccatatgcaa gtctgaatgg cacacgccac agtacaaaat atcaatcaaa acatcgtctt
     2041 caagcaattc acggcgttca aaactgtgtg gggcaagtgg tgtggttgcc gaaaaagtgg
     2101 cgtaggattt gatagggtaa gccatttttg gggtttaaat ggctgaaatg gcaattacta
     2161 tagtgccgat gatttattat tgaaaatcaa gatttttgat aaatcggtat cagttaaaat
     2221 gataattggg ggttttcaga ctgactgaaa aattattttg cccattttaa aaacaaaaac
     2281 accgccctca tcacaaaagc ggtgtttttc atcaaaattg tgtcaaagca tactctgcca
     2341 attctgtaag cacttcatca gcaggacgct gagtgggttt taaattgagt gccaaatgtt
     2401 tcacgccttt ttcttgttct tttgcccaaa agtctgccaa gccttttgca ccaccacgca
     2461 gataaatgtt gttaaataac tgtgctttgg cgtttttgtc gtccaaaact tccacaaatt
     2521 gagcatagcc aaatgctgtg ggggtgtctt tttggcgtaa atcggcaagg gtgttgatga
     2581 tgtttgcggt gtcggcagga ttcacaccgt gccaaatcca cgcatcaggt acattagcaa
     2641 gccagtccat ttcttgcctt gctcgtccaa tcgccacaat gggcaagcgg tgtttgggtt
     2701 tggggagcaa atccaaattg tctgttaaat cggcataatg tttgcctttg aaatggggaa
     2761 aatcctgctc ggttaaggtg ttaatcaaat caatgctttc acgaaaacgc tcgctacgag
     2821 aggcaaaatc cgccccaaat gcagggtatt ccacaggtct atcgccagag gataagccca
     2881 ataaaaaccg tccatgactc aaactatcca cacttgtcgc cattttggca atgtgaatgg
     2941 gactacgcaa aggggcaatc agccctgccg tgccaagggc gatgttttgg gtgtgggcgg
     3001 acaaaaaacc aagtgtaacc atcgggtcaa gcccttgccc cacatcgcca aaatgagggt
     3061 cataaaacgg cacatctcgt acccacaatg ctgaaaagcc caagttttca gccagccgtg
     3121 cattgtcggc aatggtggtc aaattgtctg gaatgtgatt ttgatagccc ataaaggggg
     3181 caattaagcc cagtgttaat tgattttgcc caaaaacttg ggagaaaatg ggggaaagcg
     3241 tgttcatttt ggcgtacctg tcttatttaa gataaggtat tttaagggct tttgagtttg
     3301 cttaaaatgg gataaattga gaaagtgttt tgctaaattg gcataaatag acgctttcaa
     3361 gctgactgaa aatttgcaaa atttttaata aatatttcaa acttaagtga gcat
//
LOCUS       DANLXD010000163         3404 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.164, whole genome shotgun sequence.
ACCESSION   DANLXD010000163 DANLXD010000000
VERSION     DANLXD010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3404)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3404)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3404
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.164"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            81..671
                     /locus_tag="PXD18_002462"
     CDS             81..671
                     /locus_tag="PXD18_002462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302835.1"
                     /translation="MTTQITTAQINDLLKSHDIQGYANEWQGRRIYINLSAKNNESKG
                     DRNYQLYIDLATGELVSKLGKGLTTRAFDAAVKAFENAFNAKDTAENTAPVESKETEQ
                     ENKQETTKLVITKPTLKGSEKQIDSANEIINLFIAKIGDTSIPVTATQEQITQAQAMV
                     DNFFAMTNAGKWIEKFKGLNDNSEPKQFWLSVKYGW"
     gene            741..1259
                     /locus_tag="PXD18_002463"
     CDS             741..1259
                     /locus_tag="PXD18_002463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302836.1"
                     /translation="MTTQVTPQIMRIIGQIVAATYGDDVPTNVQTIILRYPIRGIGFI
                     SSRRELSINNGEIARLMDKIPGDLEDPKDGMPFDCQGAFWLGYYQYCKLSNDVKNYTS
                     KELSIIGESLYGTQWQSNLARDLRLSDARRVREWVAGERKIPFGVWADLTELVKAKKA
                     NLSSILKKLTID"
     gene            complement(1406..1717)
                     /locus_tag="PXD18_002464"
     CDS             complement(1406..1717)
                     /locus_tag="PXD18_002464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302837.1"
                     /translation="MTKTKHKHPLAEAFYQLGKDVGEINRRLVVVDEQSLKLQELKQT
                     INEQTEQIKTLGTVVNKLIDALQQSQSLNVRSESAVAATENQDHLNDGVQYQGPGRAR
                     A"
     gene            complement(1710..1859)
                     /locus_tag="PXD18_002465"
     CDS             complement(1710..1859)
                     /locus_tag="PXD18_002465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302838.1"
                     /translation="MDNILITIHPTETIDITIDKLVVIHIGEEYGDTPDFLTIYQQAK
                     ELNDD"
     gene            complement(2093..2386)
                     /locus_tag="PXD18_002466"
     CDS             complement(2093..2386)
                     /locus_tag="PXD18_002466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302839.1"
                     /translation="MTTFNKILNPMYSTIASYSTQDDGSLNAKYVVGTGDDTDGEVTN
                     FVIITSEYKYIDAQSAKAITDAPLTKEDIGKTPTQIMLGRIYNHLKETGQIVV"
     gene            complement(2509..>3404)
                     /locus_tag="PXD18_002467"
     CDS             complement(2509..>3404)
                     /locus_tag="PXD18_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302840.1"
                     /translation="KRVKVVFTAPTSGCIRFALRLDNIQGKANPFLFARRPMLEEASD
                     NVTDITQPSPWQNAGVTAIHGGSIVTNTVTAQQIAANTITANEIATGTIAARNMAANS
                     INASHIVGSSITADKLNVNNLAAISANLGKVTAGTITGTTITGNTISGGSINGTTISG
                     TTISGGTIKGARLEGATGKFTGELEVSQLIGGGVIEQVTGKLKYSHRNRIYEGQEHGE
                     NSSSPIYRHEYIYKATVTINAAPTRRYIEIIGSESFILEANQSITKTIEKSLNRNASG
                     SSLDFIVLAYSISTAKYISIS"
BASE COUNT         1031 a          671 c          673 g         1029 t
ORIGIN      
        1 aaattattat gcgcctataa ttaggctcat aaagcaaggc tagggagcca gctaataacc
       61 atcagccaaa gggggctaaa atgacaactc aaattacaac cgcacaaatc aacgacttat
      121 taaaatctca cgatatccaa ggctacgcca acgaatggca aggtcgccgc atttacatta
      181 acctttcagc aaaaaataac gaaagcaaag gtgatcggaa ttaccagttg tacattgacc
      241 tagccacagg cgagttagtg agcaaacttg gcaaaggatt aacaaccaga gcgtttgatg
      301 ctgccgtaaa agcttttgaa aacgctttta atgctaaaga caccgctgaa aatacagcgc
      361 cggtagaaag caaagaaaca gagcaagaga acaaacaaga aacaactaag cttgtaatca
      421 caaaaccaac attaaaaggc tctgaaaaac aaattgattc ggcaaacgaa atcatcaatc
      481 tttttattgc gaagattggt gatacctcta tcccagtaac agcaacgcaa gaacaaatta
      541 ctcaagctca agcaatggta gataattttt ttgcaatgac aaacgctgga aagtggatcg
      601 aaaaatttaa aggtctaaat gataatagcg aaccaaagca attttggtta tccgtaaaat
      661 atggatggta gattgagata acaaataagc cgtaagagca aaggcttacg gctaaaacaa
      721 acagataact ggagattatt atgactacac aagtaacacc acaaattatg cgcattatcg
      781 ggcaaattgt cgctgctact tatggtgacg atgtgccaac aaacgtacag acaataatct
      841 tgagataccc tataagaggc atagggttta tctctagtcg cagagagcta tctattaaca
      901 atggagagat agcaagatta atggataaaa taccaggcga cctcgaggac cctaaagacg
      961 ggatgccttt tgattgtcag ggggcgtttt ggcttggata ctatcaatac tgcaaattaa
     1021 gtaacgatgt aaaaaattac acatcaaaag agctatccat cattggcgag tcattgtatg
     1081 gcactcaatg gcagtctaat ctagcgagag atttgagatt atctgatgct cgccgtgtcc
     1141 gcgaatgggt ggctggtgaa cgtaaaatcc ctttcggggt ttgggctgat ttgaccgaat
     1201 tggttaaagc caaaaaagct aacttatcat caattcttaa aaaattaaca atagattagc
     1261 actgatttta aagcccctct cggggcttaa ttatagaaaa taaaatcaca atggctaatt
     1321 ttgccaaatt tgcctgttaa aacgtgcgaa aaattacaaa aaacggctag agctatagcc
     1381 gttttgagtg cagatgttaa cagagttaag ctctagcacg tcctgggcct tgatactgca
     1441 caccatcatt taaatgatct tgattttcgg ttgctgctac agcagattct gatcttacat
     1501 ttaaactttg tgactgttgt aatgcatcaa taagtttatt taccactgtt ccgagtgttt
     1561 taatttgctc ggtttgctca ttaatagtct gctttaactc ttgcagtttt aatgattgct
     1621 catccacaac cactaatcga cggttaatct ctcctacgtc tttacctaat tgataaaatg
     1681 cttctgcaag tgggtgtttg tgtttagttt tagtcatcgt taagctcctt tgcttgttgg
     1741 tatatagtta aaaagtcagg tgtgtcacca tactcctcac ctatatggat aactaccagt
     1801 ttgtctatgg tgatatcaat agtttcggtt ggatgtatag tgattaagat attgtccata
     1861 ttcccgcctt aaatttgggt ttggtcaggg ataagttgga tcgtgccgta gtactgccat
     1921 tttgggtgga tagctcaatt tgaggctctg tgctgccctc tactatggcg tgtaaatcca
     1981 gcctaatacc ctctaaattt acaggctcgc catttgtttg cctaaaaaaa aaggcgataa
     2041 cttacgtcat cgcctctgaa aaacttaaat ttatgctttt gcatttagac ccctacacta
     2101 caatctgacc ggtttctttg aggtggttgt agatacgtcc taacataatc tgcgttggcg
     2161 ttttgccaat atcctctttt gttagcggtg catcagtaat cgccttggcg gactgtgcat
     2221 caatgtattt gtactcactt gtgatgatta caaagtttgt tacttctcca tcggtatcat
     2281 cgcctgtacc gaccacatat ttagcattga gcgagccgtc atcttgcgtt gagtagcttg
     2341 cgatggtgga atacattggg tttaagattt tgttaaaagt tgtcataatt tttcctttta
     2401 tcgatagttg aaataaaaac aatcgcctga attgacctgc aagcggttgg ttttggatat
     2461 ttaaaaaagc tgtggctatc cgcactcagt actacattga ggcgataact aactgataga
     2521 gatatattta gccgtcgaaa tggaataggc taaaacaata aaatctaaag agctaccact
     2581 tgcatttcta tttaatgatt tctctattgt ttttgtgatt gattgatttg cttctaaaat
     2641 gaatgactca cttccgatga tttcaatata cctccttgtc ggcgctgcat ttatggtgac
     2701 agttgcttta tagatatatt cgtgtctata aattggagag gaggagtttt ctccatgttc
     2761 ttgcccctca taaatgcgat tacgatgtga atattttaat ttgcctgtaa cctgctctat
     2821 aacacctccc cctattaatt gagatacttc aagttcgccg gtaaatttgc cagtagcccc
     2881 ctccaatctt gcacccttta ttgtgccgcc agagatagtt gtaccgctaa ttgttgtacc
     2941 attaatactt ccgccactaa ttgtattacc agtaattgtc gtacctgtaa ttgtaccagc
     3001 agttacctta ccaagatttg ccgatattgc cgctaaattg tttacattta gcttatccgc
     3061 agtgatcgaa ctccccacaa tatgacttgc attaatcgag tttgctgcca tatttcgagc
     3121 tgcaatcgtg ccggttgcga tttcgttggc ggtaatggta tttgctgcaa tttgttgagc
     3181 agtaacggta ttagtaacta ttgatccacc gtggatagcg gttacaccgg cattttgcca
     3241 agggctaggc tgagtgatat ctgtaacatt atcactagcc tcctcaagca ttggcctacg
     3301 agcaaataaa aatggattag ctttaccttg aatattatct aatcgtaatg cgaaacgaat
     3361 acagcctgaa gtaggtgcag taaatacaac cttaacccgt ttca
//
LOCUS       DANLXD010000164         3342 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.165, whole genome shotgun sequence.
ACCESSION   DANLXD010000164 DANLXD010000000
VERSION     DANLXD010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3342)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3342)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3342
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.165"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(67..639)
                     /gene="pdxT"
                     /locus_tag="PXD18_002468"
     CDS             complement(67..639)
                     /gene="pdxT"
                     /locus_tag="PXD18_002468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase glutaminase
                     subunit PdxT"
                     /protein_id="HDL6302841.1"
                     /translation="MKIAILALQGAFSEHTDKLQQLGVESMEIRQLADLNQDFDGLIL
                     PGGESTVQGKLLRELGLLEPLRQKILNGLPTLGTCAGLILLAENLVNDDKKHLATLPV
                     TVKRNAYGRQLGSFLVEEEVKYLGKIPLTFIRAPYIESTGKDVEILAKISGKIVGVKY
                     QNQIGISFHPEVNNDLSFHRYFVEMCRKNK"
     gene            complement(639..1511)
                     /gene="pdxS"
                     /locus_tag="PXD18_002469"
     CDS             complement(639..1511)
                     /gene="pdxS"
                     /locus_tag="PXD18_002469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase lyase subunit
                     PdxS"
                     /protein_id="HDL6302842.1"
                     /translation="MTNRYDLNRQLAQMLKGGVIMDVTTPEQACIAEEAGACAVMALE
                     RIPADIRAAGGVSRMSDPKMIKSIQAAVSIPVMAKVRIGHVTEAQILQAIEIDYIDES
                     EVLSPADDTFHINKRKFEVPFVCGAKNLGEALRRINEGAAMIRSKGEPGTGNVVQAVH
                     HLRKMKQEIARLVSHTTDELYHVAKELQVPFDLVQYVHQYQKLPVVTFAAGGVATPAD
                     AALMMQLGAEGVFVGSGIFKSGDPAKRARAIVQAVTNYNDPKLLAELSEDLGEAMVGI
                     NEQEIELLMAARGV"
     gene            1722..3125
                     /locus_tag="PXD18_002470"
     CDS             1722..3125
                     /locus_tag="PXD18_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDL6302843.1"
                     /translation="MLTYTFNTQEGTALYEQLYRFLKNDIESNILIAGDKLPSKRAFA
                     KHLGISVMTVETAYQQLVAEGYVNTQPKKGFFVNALNLPEKKEAISVQLQKISSEQYE
                     KNKKWQADLTNRQTLAENFPFSVWTKLVREVLKTHQSELMERAESGGVWTLKFAIANH
                     LRAFRGMIVNPTQIIIGAGTEYLYGLLIQLLGLDKHYALTEPSYDKLRRIYHSYRLST
                     ATVSMPFSIDELNSKNVDVIHTSPSHHFPTGHVMPIAKRYELLAWVAQKAERYIVEDD
                     YDSEFRFVGQPIPALKSIDMLGRVIYMNTFSKTLSSTVRIAYMVLPPELLNRFQQELG
                     FYASTVSNFEQYILAEFIQQGYFEKHINRMRAYYQKKRDKLLKAFKQGNLAEKIAIKE
                     EHSGLHFIVQLNTTLTERQILQAAEEQGIKFVALSAYYQDKSQIQQNAFIIGYSNLKD
                     DQINYVAESLKKILDNE"
BASE COUNT         1040 a          662 c          604 g         1036 t
ORIGIN      
        1 tttttttatt caaaactact ttttctaaaa aagtataaaa aataagaggc aatagcccct
       61 tttcttttac ttattttttc ggcacatttc cacaaaatag cggtgaaaac ttaaatcatt
      121 attcacttcg ggatggaagg atatacctat ctgattttgg tattttactc caacaatctt
      181 accgcttatc ttggctaaaa tttctacatc ttttccagtg ctttctatat aaggcgcacg
      241 aatgaatgtg agaggaattt taccgagata tttaacttct tcttctacta aaaacgagcc
      301 taattgcctt ccgtaagcat tacgtttcac tgttacaggc aaagtagcca aatgtttttt
      361 atcgtcgttt accaaatttt ccgcaagcaa aattaaaccc gcacaagttc caagcgttgg
      421 caagccattt aaaatttttt gacgaagcgg ctcaagcaag cctaattcac gtaataattt
      481 accttgaaca gtcgattcgc caccaggtaa aatcagacca tcaaaatctt ggtttaaatc
      541 agcaagttga cgaatttcca tactttcaac ccctagttgc tggagtttat cagtatgctc
      601 gctaaatgca ccttgcagag caagaatagc aattttcatt agacacctct tgctgccatt
      661 agcaattcaa tctcttgctc attaattcct accattgctt cacctaaatc ttcagaaagc
      721 tccgcaagta atttaggatc gttgtagttg gtaacagctt gtacaatggc ccgcgctcgt
      781 ttagcaggat cgcctgactt gaaaatacct gagccaacga agactccttc tgcacctaac
      841 tgcatcatca atgcagcatc ggcaggggtt gcaacacctc cagcagcaaa ggtgacaaca
      901 ggcaattttt ggtactgatg tacatattgt actaaatcaa atggtacttg gagctcttta
      961 gctacgtgat aaagttcatc tgtggtatgt gaaaccaagc gggcaatttc ttgtttcatt
     1021 ttgcgaagat gatgtactgc ttgcaccaca ttgcctgttc ctggctcgcc cttactacgg
     1081 atcatagcag cgccttcatt aatacgacgt agggcttcgc ctaaattttt tgctccacat
     1141 acaaatggca cttcaaattt acgcttgtta atgtggaagg tatcatctgc aggagaaagc
     1201 acctcacttt cgtcaatata gtcaatttcg atcgcttgca ggatttgtgc ttctgtaacg
     1261 tgtccaatac gtactttcgc cattacagga atggataccg ctgcttggat actctttatc
     1321 atcttgggat cactcatacg agaaacgcca ccagctgcac gaatatctgc aggaattctc
     1381 tctagtgcca ttactgcaca agctccagct tcttccgcaa tgcaggcttg ctcaggggta
     1441 gttacatcca taattacacc gccttttaac atttgagcaa gttgtctgtt taaatcatag
     1501 cgattagtca ttgtactttt tccttctaat tgttgaataa ttgaactttt cgtagtttcg
     1561 attagctcgg cattaagttt atttttatat tcgctggatg cgagtgttca tctaccaatt
     1621 taaatacact cagccaattt gagtgaggaa acagcatgta ttgtaattta atctgaactg
     1681 tttaaaatga ccattttatg tttttcttat catgtcagat tatgcttacc tacactttta
     1741 acacacaaga aggcaccgct ctctatgagc aactttaccg ttttctaaaa aacgacattg
     1801 aaagcaacat acttatagca ggggataaac tgccgtctaa acgggctttt gcaaagcatt
     1861 taggcatttc agtaatgaca gtggaaacag cttaccaaca gttagtagca gaaggttatg
     1921 tgaatactca gcctaaaaaa ggcttttttg tgaatgcttt aaatttacca gaaaaaaagg
     1981 aagccatatc agttcagcta caaaaaatca gttcagaaca gtatgagaaa aataaaaaat
     2041 ggcaggcaga tttaactaat cgacagactt tagcagaaaa ttttccgttt tcggtttgga
     2101 caaaattagt acgcgaagtg ctgaaaacac accaaagtga gctaatggag cgtgctgaga
     2161 gtgggggcgt atggacatta aaatttgcga tagccaatca tcttcgagcc tttagaggaa
     2221 tgatcgttaa tccaacacag attattattg gagcgggtac ggagtatctt tacggtttgc
     2281 tcattcagct tctaggctta gataaacatt atgcactaac tgagcccagt tacgataaat
     2341 tgcgcagaat ttatcacagt tatcgcttat caacagccac agtatcgatg ccattttcaa
     2401 tcgatgagtt aaattcaaag aatgtggacg tgatacatac ctcgccatca caccattttc
     2461 cgacaggaca cgtaatgccg attgccaaac gttatgagtt gttagcttgg gttgcacaaa
     2521 aagctgaaag atatattgta gaagacgact acgacagcga atttcgtttt gtaggacaac
     2581 caattcctgc attgaaatct attgatatgc tcgggcgagt tatctatatg aatacttttt
     2641 ctaaaacgct ctcttcaact gtacgaattg cctatatggt tttgccacca gaattactga
     2701 atcgttttca gcaggaatta gggttttatg cttctaccgt ttccaatttt gagcaatata
     2761 ttttggcaga atttattcaa caaggctatt ttgaaaagca tatcaatcga atgcgagcgt
     2821 attatcaaaa aaagagggat aaattactaa aagctttcaa gcaaggcaat ttagcagaaa
     2881 agattgcaat aaaagaagaa cattcaggct tgcatttcat tgtacagcta aacacaacat
     2941 taacagaaag gcaaattttg caggcagcag aagaacaagg tataaaattt gtcgcattgt
     3001 ctgcttatta tcaagataaa tctcaaattc agcaaaatgc ttttataatt gggtactcta
     3061 atttaaaaga tgatcagatt aattatgtag cagagagcct gaaaaaaatt ttagacaacg
     3121 aatagcaagt atcaaaactg ctttaatttt tagcaaattg ccttaaaaac acgcaagtgg
     3181 taattatttt agtgattttt gcaaaaaatt accaaattct ccttgcaagg cattttgttt
     3241 tgcgtataat gcatggcaca caacgacgca ctgttgtgaa cgatttaaaa ttgatttcca
     3301 gtgcgtcgtt tctttttgtt ctttaacaat ttatcagaca at
//
LOCUS       DANLXD010000165         3238 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.166, whole genome shotgun sequence.
ACCESSION   DANLXD010000165 DANLXD010000000
VERSION     DANLXD010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3238)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3238)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3238
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.166"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            3..2729
                     /gene="secA"
                     /locus_tag="PXD18_002471"
     CDS             3..2729
                     /gene="secA"
                     /locus_tag="PXD18_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HDL6302844.1"
                     /translation="MISKLLTSIFGSSNDRTLKRLRKRVAQINKLEPTFEQLSDEALK
                     DKTAEFKQRLADGVSLDSLLPEAFATVREASKRVLGMRPFDVQLIGGMVLTGRNIAEM
                     RTGEGKTLTATLSCYLNALTGKGVHVVTVNDYLARRDAETNRPLFEFLGLTVGVNIPG
                     LPSDAKRAAYQADITYSTNSELGFDYLRDNLAHDKNERFQRELHYALVDEVDSILIDE
                     ARTPLIISGPAEDATQIYQAVDQIIPHLIAQDKEDSEEYTGEGDFTLDLKNKQAHLTE
                     RGMVKVEDFLTQMGLMEEGESLYHPARISLLHHVSAALRAHKLFERNVDYIVKDGEIV
                     IIDEHTGRTMAGRRWSDGLHQAIEAKERVAIQGENQTVASITYQNYFRLYEKLAGMTG
                     TADTEAFEFQQIYGLNTVVIPTNRPVIRDDRTDLMFKSEAEKFAAIITEIRDCIERKQ
                     PVLVGTASVEKSELLSAELTKAGIAHNVLNAKFHAQEAEIVAEAGAPGAVTIATNMAG
                     RGTDIVLGGNWKMEVAKLENPTQEQIDAIKAAWQERYDIVMQAGGLHIIGTERHESRR
                     IDNQLRGRSGRQGDPGSSRFYLSLDDALMRIYLNEGKLNMMRKAFTEEGEAMESKLLT
                     KVIASAQAKVEAHNFDGRKHLLQYDDVANEQRKVIYEQRNHLLETDNIASMIESIRQD
                     VFESTINQYIPPQSIEEMWNVPGLEERLRREFGLDLPISHWLETEKDLHEETLRERIL
                     NIAIAEYNAKEEIVGAEVMRNFEKGVMLQNLDELWKEHLASMDYLRKGIHLRGYAQKD
                     PKQEYKKESFAMFTNMLDTLKLNVISILSRIQVRSKEEVEEAQRQQAEMDAASTPVTQ
                     ATDSAAGSREENSAESLSEEELANLNIGRNDPCPCGSGKKYKHCHGNKARYS"
     gene            2816..3214
                     /gene="mutT"
                     /locus_tag="PXD18_002472"
     CDS             2816..3214
                     /gene="mutT"
                     /locus_tag="PXD18_002472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase MutT"
                     /protein_id="HDL6302845.1"
                     /translation="MSKPIIQVSAGIIRNEFGQIYLTQRLEGQDFAQSLEFPGGKVDP
                     NETPEEALKRELEEEIGIQVLSAFPYENFCFEYPTKIIEFFFYLVEEWVNEPYGREGQ
                     EGFWIAQSDLDEGAFPPANAQLIKRLKEHA"
BASE COUNT         1026 a          587 c          764 g          861 t
ORIGIN      
        1 caatgatttc aaaattactg acttctattt ttggctcaag caacgatcgc actttaaaac
       61 gtttaagaaa gcgagtggca caaattaata agcttgaacc aaccttcgag caattatctg
      121 atgaggcgtt aaaggataaa acagcggagt ttaagcaacg ccttgcagat ggtgtatcgc
      181 tagatagcct attacctgaa gcttttgcga cagtgagaga agcaagcaaa cgagtattag
      241 gtatgcgacc atttgatgta cagctgatcg gcggtatggt gctaacgggg cgtaatattg
      301 cagaaatgcg tactggggaa ggtaaaaccc taactgcaac tttatcttgt tatttgaatg
      361 ctttgaccgg taaaggtgtt catgttgtta cggtgaatga ttacctcgcc cgccgtgatg
      421 cggaaaccaa ccgtccgtta tttgagtttt taggcttaac cgttggagtg aatattccgg
      481 ggttaccttc cgatgcaaaa cgtgctgcat accaagcaga tattacctat tcgactaaca
      541 gcgaattagg ttttgattac ttgcgtgata acttagctca cgataaaaac gaacgtttcc
      601 aacgtgagtt acactacgca ttagttgatg aagtagactc tattttaatt gatgaagctc
      661 gtacgccgtt aattatttca gggcctgcgg aagatgcgac ccaaatttat caagcggtag
      721 atcaaatcat tccgcatttg attgctcaag ataaagaaga cagtgaagag tacaccggtg
      781 agggcgattt taccttagat ctgaaaaaca aacaggctca tttaaccgag cgtggtatgg
      841 tgaaagtaga ggatttctta actcaaatgg ggttaatgga agagggcgaa agtttatatc
      901 accctgctcg tatttcgctg ttacaccatg tgagtgcagc attgcgtgcc cataaattat
      961 ttgaacgcaa cgtagattac attgtaaaag acggtgaaat tgtgattatt gatgagcaca
     1021 ccggtcgtac aatggctgga cgtcgttggt ctgacggctt acaccaagcg attgaagcta
     1081 aagagcgtgt ggctattcag ggcgaaaacc aaactgttgc ctcaattact taccaaaact
     1141 atttccgttt gtacgaaaaa ttagccggta tgactggtac ggcagacacc gaagcctttg
     1201 aattccagca aatttatggc ttaaatacgg tggtgattcc aaccaacaga ccggtgatcc
     1261 gtgatgaccg tacagactta atgtttaaaa gcgaagcgga gaaatttgcg gcgattatta
     1321 ctgaaattag agactgtatc gagcgtaaac agcctgtttt ggttggcaca gcatcggtgg
     1381 aaaaatcaga gttattatcg gcagaattaa ccaaagccgg tattgctcat aacgtattaa
     1441 atgcgaaatt ccacgctcaa gaggctgaaa ttgtagcgga agcgggagct ccgggggcgg
     1501 ttactatcgc aaccaatatg gctggtcgtg gtacggatat tgtgcttggc ggtaactgga
     1561 aaatggaagt agccaagctt gagaacccga cacaagaaca aattgatgcg attaaagctg
     1621 cgtggcaaga gcgttatgac atcgtaatgc aagccggtgg tttacatatt attggtacag
     1681 aacgccacga atcccgccgt atcgacaacc agttgcgagg tcgttctggt cgtcaaggtg
     1741 acccggggtc atcacgtttc tatctctctt tagatgatgc cctaatgaga atttacctca
     1801 atgaaggtaa attaaatatg atgcgtaaag cctttaccga agaaggtgaa gcgatggagt
     1861 ctaaactgtt aaccaaagtg attgcctctg cacaggcgaa agtagaagcg cataactttg
     1921 atgggcgtaa gcatttatta caatatgatg atgttgccaa tgaacagcgt aaagtaattt
     1981 acgaacaacg caatcatcta ttagaaacag ataatattgc ctcaatgatc gaaagcattc
     2041 gccaagatgt atttgaaagc acgattaacc aatatattcc gcctcaatct atcgaggaaa
     2101 tgtggaatgt gccgggctta gaagagcgtt tacgccgtga atttgggttg gatttaccga
     2161 tttctcactg gcttgaaact gaaaaagact tgcacgaaga gactttgcgt gaacgtatct
     2221 taaatattgc gattgcagag tacaatgcga aggaagaaat agtaggcgca gaggtaatgc
     2281 gtaattttga aaaaggtgta atgctacaaa acttagatga gctttggaaa gagcatctag
     2341 cctcaatgga ttatttacgc aaaggtattc acttgcgtgg ttatgcacaa aaagatccga
     2401 agcaagagta taaaaaggaa tcttttgcga tgtttaccaa tatgcttgat accttaaaat
     2461 tgaatgtaat tagcatttta agccgtattc aagtgcgtag caaagaagag gtggaagaag
     2521 cgcaacgcca gcaagctgaa atggacgctg caagtacgcc agttacacaa gctaccgatt
     2581 ctgctgctgg tagtagagaa gaaaatagcg cagagagctt aagtgaagaa gagttggcaa
     2641 acttaaatat tggtcgaaat gacccttgcc cttgtggttc gggcaaaaaa tataagcatt
     2701 gccatggtaa caaagcgaga tattcgtaat taacaagcgg tcatattcag tcaggaattt
     2761 gcaaattttc tgcttaatat gaccgcttga atttatagaa agagtgaagg aaactatgtc
     2821 aaaaccgatt attcaagtct cagcagggat tattcgtaac gaatttgggc aaatttactt
     2881 aacccaacgt ttagaagggc aagattttgc tcagtctctt gaatttcccg gggggaaagt
     2941 cgatcccaat gaaacccctg aagaagcact aaaacgagaa ttagaagaag aaattggtat
     3001 tcaagtgtta agcgcttttc cgtatgaaaa tttttgcttt gaatatccaa caaaaatcat
     3061 tgaatttttc ttttatttgg tggaagagtg ggtaaatgaa ccttacggaa gagaagggca
     3121 agaaggtttt tggatcgcac aatcggattt agatgaggga gctttcccac cggcaaatgc
     3181 ccaattaatt aaacgcttaa aagaacacgc ataatttgta ttgagaactg tatctaaa
//
LOCUS       DANLXD010000166         3186 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.167, whole genome shotgun sequence.
ACCESSION   DANLXD010000166 DANLXD010000000
VERSION     DANLXD010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3186)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3186)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3186
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.167"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            172..777
                     /locus_tag="PXD18_002473"
     CDS             172..777
                     /locus_tag="PXD18_002473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDL6302846.1"
                     /translation="MSEPNHAEQIRRLDNIIRLGTIAEVDLTTATARVNSGGITTDFL
                     PWLTFRAGTSQTWSAPTVGEQCVVLSVSGEFTTGVILFGIYTQNAPSQSADEHLFRFS
                     DGAEISYNTASGQLTVKNCKVVIVQATESITLDTPTVKATKNVVIGGNLSVKGTTSSQ
                     GAISTQGAVTAKGDVSGAGISLGSHHHIEQGDGRPTSGAKP"
     gene            777..1112
                     /locus_tag="PXD18_002474"
     CDS             777..1112
                     /locus_tag="PXD18_002474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HDL6302847.1"
                     /translation="MNRETGEQLEDEVEHIKQSIKDILLTAKGSRVMRRTYGSNLYKL
                     TDKPIAASLIMQLSAACVMALQQWEPRIAITRFKVEFAEDNYNKLICTLDFTLKHRKI
                     SIKGMRFTL"
     gene            1109..2026
                     /locus_tag="PXD18_002475"
     CDS             1109..2026
                     /locus_tag="PXD18_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HDL6302848.1"
                     /translation="MSEIVDLSKLPAPKVLEELDYETLLAERKAKFLSLYPESERAVM
                     AARLALESEPITKLLQENCYLQLLERQRINSAAQATMLAYATGTDLDVIAANFNVERL
                     VVQAEDLTASPPIVEELEPDDDFRQRVQLKIESVSVAGPRKAYTFHALSANGKIADVS
                     VISPQPAYVTVTLLSRDGNGAVASEIINAAKIALNDEEVRPIADRVTVQGASIVEYEI
                     NAVLHLYRGPEKEPILKAAKANLEAYINQTKRIGRDVTHSGIHAALHVAGVQNVEILQ
                     PRTDLVLTPYQAGYCVNYTLNVEVSDEYS"
     gene            2013..2645
                     /locus_tag="PXD18_002476"
     CDS             2013..2645
                     /locus_tag="PXD18_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HDL6302849.1"
                     /translation="MNTVKALLPPGSSLLEKRAAECLQQAVQNPIKFANLINPHKCPV
                     KFLPYLAWALSVDYWEEHWSEELKRETIIRSFEEHRKKGTASAVRRIVESLGYAFEIR
                     EWFAEKRQRQPGTFRVFVELKDKGISEKIYQELERLIEDAKPVSRHITELAVSATSKG
                     KANIFSGAHSGEIITIYPPKKLPVIVIKSKMDLFSATNSGEIITIYPNKR"
     gene            2648..>3186
                     /locus_tag="PXD18_002477"
     CDS             2648..>3186
                     /locus_tag="PXD18_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015981653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6302850.1"
                     /translation="MEQKYKTILTHHGERVIVEALANKIPVPLKEMAIGDGNGSSITP
                     SASQTTLVREVYRAEITDLLEDPQNRHQMIAELLIPENVGGFIVREIGLFDEQGGLVA
                     VANCPENYKPVLEQGSGKVQYYRMILQVSSSDAVTLSINNNIVYATRTEFNEFVNNLS
                     SPDGYKHIGRCKSVAELRT"
BASE COUNT          985 a          686 c          729 g          786 t
ORIGIN      
        1 cttagctatc attcacagta gccgacttta cccacgccca taatcagtaa gcgacctaat
       61 cggtcgcttt ttctttgcct gttaaaaccc atttcacacc tcgcatttat acccaaagcc
      121 tttcgccttt tgcaaaatat cctcattttt taaccgcttg taattgtaaa aatgagtgag
      181 ccaaaccacg ccgaacaaat ccgccgttta gacaatatta tccgacttgg cactattgcc
      241 gaggtggatt taaccacagc gactgcacgg gtcaattcgg gcggtattac gaccgatttc
      301 ttaccgtggc tgacttttcg tgccggtaca tcgcaaacgt ggtcagctcc aacagttggc
      361 gagcaatgcg tggtgttaag cgtgagtggt gaatttacca caggcgtgat cttatttggg
      421 atttacaccc aaaacgcccc gagccaatcc gccgatgagc atctattccg cttttcggac
      481 ggtgcagaaa tcagctacaa caccgcaagc ggtcaattaa ccgtaaaaaa ttgcaaagtg
      541 gtgattgtgc aggcgacaga atctatcacg ctcgacacgc ccacggttaa ggccacaaaa
      601 aatgtcgtga ttgggggcaa cctatccgtg aaaggcacaa cctcatcgca aggtgcaatc
      661 agcacacaag gggcggtaac agcaaaaggc gatgtatcag gggcgggaat cagtttaggc
      721 agccaccatc acattgagca aggtgacggc agaccaacta gcggagcaaa accataatga
      781 accgagaaac aggcgaacag cttgaagacg aagtagagca tatcaagcag tctatcaaag
      841 atattttgct gacggcaaaa ggcagtcggg taatgcggcg aacctatggc agtaatctct
      901 acaagctaac tgataaaccg attgccgcaa gtctgattat gcaactctcc gctgcgtgcg
      961 tgatggcgtt gcagcaatgg gagccacgta tagcgatcac ccgatttaaa gtggaatttg
     1021 ccgaagataa ctacaataag ctgatttgca ccttagattt tacccttaag caccgaaaaa
     1081 tcagcatcaa aggaatgcgt tttacactat gagcgaaatt gtcgatttat ccaaactccc
     1141 cgccccgaaa gtactggaag aattggacta tgaaacctta ctggcagagc ggaaagccaa
     1201 gtttttatcc ctctacccag aaagcgaacg agcggtaatg gctgcacggt tagcgttgga
     1261 gtctgagcct atcaccaagt tactacaaga aaattgctat ttgcagctac tcgaacgcca
     1321 acgcattaat agtgcggctc aagccacaat gcttgcttat gctaccggta cggatttaga
     1381 tgtcatcgca gccaacttta atgttgagcg gcttgtagtg caagctgaag acttaactgc
     1441 aagcccgcct atcgtcgaag agttagagcc tgatgatgat ttccgtcagc gtgtgcagtt
     1501 aaaaattgaa agtgtttcgg ttgccggtcc acggaaggct tacacctttc acgccctgtc
     1561 tgctaacgga aaaattgccg atgtgtccgt catatcacca cagccagctt atgtaacggt
     1621 aacgctgctt tctcgtgatg gcaacggagc cgtagcctca gaaatcatca atgcggccaa
     1681 aattgctctc aatgatgaag aggttagacc gattgccgat agagtaaccg tgcaaggggc
     1741 aagcattgtg gaatatgaaa ttaatgcggt gttgcatctc taccgtggac ctgagaaaga
     1801 gcctatttta aaagcggcaa aagctaactt agaggcttac atcaaccaaa caaaacgcat
     1861 tggacgagat gtgactcact caggtatcca cgccgccttg cacgttgccg gtgtgcaaaa
     1921 tgtggaaatt ttgcagccga gaactgattt ggtgctgaca ccttaccaag ccggttattg
     1981 tgtcaattac acgctaaatg ttgaggtgag cgatgaatac agttaaagca ttattgccac
     2041 ccggttcatc acttttggaa aaacgagctg ccgaatgttt gcaacaagcg gtacaaaatc
     2101 cgattaaatt tgcaaatttg attaatccac acaaatgccc cgtgaaattt ttgccctatc
     2161 ttgcgtgggc cttatcggtg gattattggg aagagcattg gagtgaagaa ttaaaaagag
     2221 aaaccattat tcgatctttt gaagaacacc gaaagaaagg cacagcaagt gcagtgcgaa
     2281 gaattgtgga atctctcggc tatgcttttg aaatccgtga gtggtttgcg gaaaaacggc
     2341 aacggcagcc cgggacgttt agggtttttg ttgagttaaa agataaaggg attagcgaaa
     2401 aaatctacca agaattagaa aggttgattg aagatgcaaa accggtatca aggcacatca
     2461 cagaattagc agtatcagcc acctcaaaag gcaaagcaaa tatttttagt ggagcacaca
     2521 gtggcgaaat tattacgatt tatccaccta aaaagctccc tgttattgtc attaaaagca
     2581 aaatggattt atttagtgca acaaacagtg gcgaaattat tacgatttat cctaataaga
     2641 ggtaaaaatg gaacaaaaat ataaaacaat attaacccat cacggtgagc gagtgatcgt
     2701 tgaggctctt gcaaataaga taccagtgcc acttaaggaa atggctatag gagatggtaa
     2761 cgggtcatca ataactccaa gtgcatctca aaccacactt gtaagagaag tttatcgtgc
     2821 ggaaattaca gatttgctag aagacccgca aaatcgccat cagatgattg ctgaattact
     2881 aatcccagaa aatgtaggtg gatttattgt ccgagaaata gggttatttg atgaacaagg
     2941 tggtttggtt gctgtagcaa attgccctga aaattataag cctgtattag aacaaggcag
     3001 tggtaaagtc caatattacc gaatgatttt acaagttagt agtagtgatg cggtcacctt
     3061 atcgattaac aataatattg tttacgccac aagaactgag tttaacgaat ttgtaaataa
     3121 cttgagtagt cctgatggct ataaacacat cggacgctgc aaatctgtag cagaactccg
     3181 cactat
//
LOCUS       DANLXD010000167         2985 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.168, whole genome shotgun sequence.
ACCESSION   DANLXD010000167 DANLXD010000000
VERSION     DANLXD010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2985)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2985)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2985
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.168"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            143..2182
                     /gene="malQ"
                     /locus_tag="PXD18_002478"
     CDS             143..2182
                     /gene="malQ"
                     /locus_tag="PXD18_002478"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HDL6302851.1"
                     /translation="MSNKQNTAHYFYSPNIKEYASPSAFEKIERLLNTDNDLQKNNQI
                     LPLVKVITQPNAEQQAVEISLNFTNVAKWQIVLENGEVRNGEIKAEQSVLTLPADLPL
                     GYHQLSISTENDEESCSLIVTPPKAFQPKPLEERKKLWGAFLQLYTLRSDNNWGIGDF
                     GDLKQFLANISDYGADFVGLNPIHALFPADPDAASPYSPSFRLWQNIIYIDVSAVEAF
                     QQSEQAQQWFHTKETQQQLAELRAKDFVDYSQVAQLKLKALQFAFEHFSQSSQQQSQT
                     AFDAFIEQAGEPLKIQATFDALHHWISSEFGEKGGWTNWAEEYQSYYSPKVAEFQISQ
                     ATQIRFYMWLQFVANQQLAECNRFAQSLSMPIGFYRDLAVGVTQSGAETWADKALFVQ
                     EASIGAPPDMLAPNGQSWGLSPMHPHILQSRGYQPFIDLVRANMKHCGALRIDHILGF
                     ARMWWVANGESAKEGIYVRYPLEDLLSILALESQRHQCLVIAEALGIVPEGILDSLEQ
                     KGIFAYNVFYFEKAENAFKPLENYPYQAMTTLSTHDLPTIQGYWKGYDFELGEKFDTY
                     PSKAVLRKLKEERSYDRLNIRNAVEKVIALEPNEVGVTIKFTHQLQRYVAHTHSALFG
                     TQPEDWLNMLEPVNIPGTSTEYPNWRRKLSATTEQIFANKDIQQLLKDINEIRKG"
     gene            complement(2250..2981)
                     /locus_tag="PXD18_002479"
     CDS             complement(2250..2981)
                     /locus_tag="PXD18_002479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HDL6302852.1"
                     /translation="MGCSSFSTKLKQEFFSGWTTFEASWLIVFLAIQIGIFIYQPDTW
                     IATIAAITGILCVVFVGKGKISNYLFGLISVSLYAYISYTFQLYGEMMLNLLVYVPVQ
                     FIGFYFWRKNMTSENTVNNAGVEEVIAKALTAKQWVIVAITTIIGTFLYIELLKYLGS
                     ALAILDGATVVISIVAQILMVLRYREQWALWIIVNIMTISLWTAMYFQNGETSLPLLV
                     MYVMYLCNSIYGYYNWIKLHRKHQQ"
BASE COUNT          962 a          630 c          576 g          817 t
ORIGIN      
        1 taataaaaca taacccttta gagttaaatt aaattttttt aacatcatat cacaaagaca
       61 aacctgttgc ctactcttct tactcatatt aatcttcaca agatcgttat tttaacaaat
      121 acagtaaagg aaaaaagtca taatgtcaaa caaacaaaat acagctcact atttttactc
      181 cccaaatatt aaagagtatg ccagcccctc tgcttttgag aaaatagagc ggcttttaaa
      241 taccgataac gatttgcaaa aaaataatca aattctaccg cttgttaaag tgattactca
      301 gccaaatgcc gagcaacaag cggtcgaaat ttcgctgaat tttacaaatg tagcaaagtg
      361 gcaaattgtg cttgaaaatg gtgaggttcg gaacggtgaa attaaggcag agcaatcagt
      421 tctaaccctg cctgccgatt tgcctttagg ctatcatcag ctttctattt caactgaaaa
      481 tgatgaagaa tcttgctcgc tgattgtaac accgccgaaa gctttccagc ctaagccatt
      541 ggaagaaagg aaaaagctct ggggtgcatt tttacagctt tatactttgc gttccgataa
      601 caactgggga attggcgatt ttggcgatct caaacaattc cttgccaaca tttctgatta
      661 tggtgcagat tttgtgggct taaaccctat tcacgccctc tttccggcag atcctgatgc
      721 ggcaagccct tacagcccgt cctttcgact ttggcaaaat attatttata ttgatgtttc
      781 agcagtagaa gcctttcaac aatctgaaca ggctcaacaa tggtttcaca ccaaagaaac
      841 tcaacagcaa cttgccgaat tgcgagccaa agattttgtc gattacagcc aagtagcgca
      901 actgaaatta aaggctctgc agtttgcttt tgagcatttt tcacagtcat ctcaacaaca
      961 atcgcaaaca gcgttcgatg cctttattga gcaagcaggc gagccattaa aaatccaagc
     1021 aacgttcgat gctttgcacc actggatttc atctgaattt ggcgaaaaag gcggctggac
     1081 aaactgggcg gaggaatatc aaagttacta ttcgcctaaa gtagctgaat ttcaaatatc
     1141 gcaggcaacg cagatacgtt tttatatgtg gttgcaattt gtggcaaacc agcaattagc
     1201 agaatgcaac cggtttgctc aatcactttc aatgccgatt ggtttttacc gcgatttagc
     1261 cgttggtgtt actcaaagcg gagcggaaac ttgggcggat aaagccctat ttgtgcaaga
     1321 ggcgtcaatc ggtgcaccac ctgatatgct tgccccgaac ggacagagct ggggactttc
     1381 gccaatgcac ccgcatattc tacaaagccg aggttatcag ccgtttattg atttagtgcg
     1441 tgctaatatg aaacattgtg gggcattgcg aatcgaccat attctcggct tcgcccgtat
     1501 gtggtgggtg gcgaacggtg aatcggcaaa agaagggatt tatgtccgtt atccgctcga
     1561 agatttgctc tctattttgg cattagaaag ccaacgtcac caatgtttag tgattgcaga
     1621 ggcacttggc attgtgcctg aaggcatttt ggactctctc gagcaaaagg gcatttttgc
     1681 ctacaatgtt ttttattttg aaaaggcaga aaacgcgttt aaaccgctgg aaaattatcc
     1741 ttaccaagcg atgacaactc taagcaccca cgatttaccg actattcaag gctattggaa
     1801 aggctatgat tttgagctag gcgaaaaatt tgacacttac ccaagcaaag ccgtattgag
     1861 aaagctgaaa gaagagcgtt cgtacgaccg cttgaatatc cgtaatgcgg tggaaaaagt
     1921 gatagcactc gagccaaatg aagtgggagt aacaataaaa tttacccacc aattacaacg
     1981 ctatgtggct cacactcaca gtgcattatt cggtacacag cccgaagatt ggctcaatat
     2041 gttagagccg gtgaacattc cgggaaccag caccgaatac cctaactgga gaagaaaatt
     2101 atccgcaacc accgagcaga tttttgcaaa taaagatatt caacaactgc taaaagatat
     2161 aaacgaaatt cgtaaaggat aataacaagc ggtcattttt aggtaaattt ttacaaaaaa
     2221 tgaccgcttg taatttgtat ttattcgctc tattgctgat gttttctgtg aagtttaatc
     2281 cagttgtaat aaccgtaaat agagttacat aaatacatca catacatcac caacagcggc
     2341 aagctggttt cgccgttttg gaagtacatt gccgtccata aagaaatggt cataatattc
     2401 acgataatcc acaatgccca ttgctcacgg tagcgaagta ccatcaaaat ttgtgccaca
     2461 atcgaaataa ccactgttgc accatctaat atagctaacg cactgcctaa atatttaagc
     2521 aattcaatat aaagaaatgt gccgataatg gtggtaatgg cgacaatcac ccactgtttt
     2581 gcggttaaag ctttagcaat tacctcttcc acaccagcat tatttaccgt gttttcgctg
     2641 gtcatatttt tacgccagaa atagaaaccg ataaactgca ccggcacata tacaagtaaa
     2701 ttcagcatca tttcaccata taactgaaag gtataagaga tataagcata aagcgaaacg
     2761 gaaattaagc cgaatagata gttactgatt tttcctttac cgacaaatac cacgcataaa
     2821 atacctgtta ttgccgcaat agttgcaatc caagtatcgg gttgataaat aaaaataccg
     2881 atttgaatcg ctaaaaaaac aatcaaccaa cttgcctcaa aagtagtcca accactaaaa
     2941 aactcttgtt ttaacttagt tgaaaaagat gaacagccca tattt
//
LOCUS       DANLXD010000168         2962 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.169, whole genome shotgun sequence.
ACCESSION   DANLXD010000168 DANLXD010000000
VERSION     DANLXD010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2962)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2962)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2962
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.169"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..208
                     /locus_tag="PXD18_002480"
     CDS             <1..208
                     /locus_tag="PXD18_002480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302853.1"
                     /translation="APANINSCCHQHDRDYGIRGTVTRADADKRLRECMIKNGNPIRA
                     WLFWLVVRAFGWRFYKNKEIKIEK"
     gene            361..507
                     /locus_tag="PXD18_002481"
     CDS             361..507
                     /locus_tag="PXD18_002481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302854.1"
                     /translation="MLAEKPKKRWRFWYAFVNGLFFDKKHCYAAYKAEVYRKQYPPEF
                     TEIT"
     gene            614..1795
                     /locus_tag="PXD18_002482"
     CDS             614..1795
                     /locus_tag="PXD18_002482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath protein"
                     /protein_id="HDL6302855.1"
                     /translation="MSILDTYLHGVEVVEVNAGGVTISTAATSVIGVVCTGDQADAET
                     FPLNTPVLITNPLNYLEKAGSTGTLRRTLNSIGSIVKTPTVIVRVAESDDSDTLTANI
                     VGTQENGKFTGIKALLTAQSTVFVKPKLLCVPQHDNQAVATELLSVAKKLNAFAFISD
                     NGATTKEQAYTYRQNFSQREGMMIFGDWKSYNTDKKAYDTDYAVARACALQAYIDKTV
                     GWHKNISNVELDGVTGITKAVEFDINESSTEANYLNEKGITICLNHNGFRYWGSRTLA
                     TDTRWAFQQSVRTAQIIKETIGAGLAWAVDMPLTPLRVKTILEAINNKLRSWASGDDP
                     RILGARVWVAEEITADIIKSGKFVIKYDYHWIPSLESLGLEQRVNDEYVVDLVNTLKA
                     L"
     gene            1804..2310
                     /locus_tag="PXD18_002483"
     CDS             1804..2310
                     /locus_tag="PXD18_002483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HDL6302856.1"
                     /translation="MGLPAKLKNFNFSVDGTSYLGETTEVTQPKLAMQLEDYRAGGMI
                     APVGVNMGLEKLELEFKIGGHEEDLLKLFGGSISGNAFRFNGAYQHDDDDSVDAVELV
                     CRGRIAEIDEGSSKAGDDTEHSYKASLTYYKKTVNGVDIIEIDTLNQIYIVDGKDRLA
                     EIRKAMGL"
     gene            2389..2703
                     /locus_tag="PXD18_002484"
     CDS             2389..2703
                     /locus_tag="PXD18_002484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HDL6302857.1"
                     /translation="MKKVTLKQGILRGEKRITEIEVRKPLTKQLRGTNLTSLMQLSVD
                     EWCIVLPRITTPKLDKADFATMSAADLLKLSGKALDLMSEDFDEADEEDSEEQGKGEI
                     LA"
     gene            2727..2843
                     /locus_tag="PXD18_002485"
     CDS             2727..2843
                     /locus_tag="PXD18_002485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HDL6302858.1"
                     /translation="MADIATVFHWTPNTFDEMTIVELGQWREKARLRNGVES"
BASE COUNT          904 a          630 c          689 g          739 t
ORIGIN      
        1 cgcaccagcc aatatcaaca gttgctgtca tcaacatgac cgagactacg gcattcgtgg
       61 cacagtaaca cgagcagatg ctgataaacg cttacgtgag tgtatgatta aaaatggcaa
      121 tccaattagg gcttggttat tttggctagt tgtgagagct tttggttggc gtttttataa
      181 aaataaggag attaagattg agaaataaag ataatactgc aagcaagcaa gcaagcaagc
      241 aagcaagcaa gcaagcaagc aagcaagcaa gcaagcaagc aagcaagcaa gcaagcaaag
      301 tgtagcgcaa tttaaacaag ctccgctacc ttttccagca gccgttgtta ccgtggtgca
      361 atgcttgcgg aaaagccgaa aaagcgttgg cgtttttggt atgcgtttgt gaatggcttg
      421 ttttttgata aaaagcattg ctatgcagcc tataaagcgg aggtgtatcg aaaacagtat
      481 ccaccggagt ttaccgaaat cacttaatcc tgttaaaccc catttcacag cccgaaccgc
      541 tcgcaacccg agcggttatt ttttaaagtt taccccaaca ttcaacccta acctttccca
      601 attaaggaat actatgtcaa ttttagatac ctatctacac ggtgttgagg tggttgaggt
      661 caatgcaggt ggtgtcacca tttccaccgc tgctacttcg gttatcggag tagtttgcac
      721 cggagaccaa gccgatgccg agacttttcc gctgaatacg cccgttttaa ttactaaccc
      781 gttaaattac cttgaaaaag caggtagcac cggcacgtta cgccgcacac ttaattcgat
      841 tggctcaatc gttaaaacgc caacggtgat cgtgcgagtt gccgagtcgg acgatagcga
      901 caccttaact gcaaatattg tcggcacgca ggaaaacggc aaatttaccg gtattaaggc
      961 gttattaacc gctcaatcaa ccgtgtttgt taagccgaaa ttgctttgtg taccacagca
     1021 cgataatcaa gccgttgcga ccgaactatt aagcgtggct aaaaagctga atgcgtttgc
     1081 gtttatttca gacaacggtg caaccaccaa agaacaggca tatacctatc gccagaattt
     1141 ctctcagcgt gaaggaatga tgatcttcgg tgactggaaa tcttataaca ctgataaaaa
     1201 agcctatgat accgattatg cagtggcccg agcttgtgcg ttgcaagcct atatcgacaa
     1261 aactgtcggc tggcataaaa acatctcaaa cgtagagcta gacggtgtaa ccggtatcac
     1321 taaagcggta gagtttgata ttaacgagag ctcaaccgag gcaaactacc tgaacgaaaa
     1381 aggcattacc atttgcttaa accataacgg tttccgctat tggggttccc gcactcttgc
     1441 caccgatacc cgctgggcgt ttcagcagtc ggtgcggacg gctcaaatca ttaaagagac
     1501 aatcggagca ggcttagctt gggcggtgga tatgccactc acaccgttgc gtgtgaaaac
     1561 aatactagag gcgattaaca acaagctacg ctcttgggca tcgggtgatg accctcgcat
     1621 tttaggtgct cgtgtgtggg tagctgaaga gatcaccgca gatattatca aatcaggcaa
     1681 atttgttatt aaatacgatt accattggat tccgtccctc gaaagcctag gcttagagca
     1741 acgggtcaat gatgaatatg tagtggattt agtcaataca cttaaagcgt tatagaggta
     1801 aaaatgggat taccggcaaa acttaagaat tttaattttt cggtggacgg cacaagctat
     1861 ttgggcgaaa ccaccgaagt cacacagccg aaactggcta tgcaacttga agactaccga
     1921 gcaggcggaa tgattgcccc tgtgggtgtc aatatgggtt tagagaaact ggagcttgag
     1981 ttcaaaatcg gcggacacga agaggatttg ctcaagctat ttggtggctc aatcagtggt
     2041 aatgcgttcc gtttcaacgg tgcgtaccag cacgacgatg acgattcagt cgatgcggta
     2101 gagttagtct gccgtgggcg aatcgctgaa attgacgaag gctcaagcaa agccggtgat
     2161 gacaccgagc atagctataa agcctcgcta acctattaca aaaaaacggt gaacggtgtc
     2221 gatattatcg aaatcgacac cctcaaccaa atttacattg tcgatggcaa agaccgctta
     2281 gcggaaattc gtaaggcaat gggtttatag attttcccct aaattttccc aaagcccctt
     2341 cccctttttt caaggggctt ttaatgataa ataattaagg attaaacaat gaaaaaagta
     2401 acattaaaac aaggcatttt gcgtggtgaa aaacgtatta ccgagattga ggtgcgtaag
     2461 ccattaacca aacaactgcg tggcacaaat cttacctcat taatgcagtt aagcgttgat
     2521 gagtggtgta ttgtactgcc acgcattacc acgccaaaat tagacaaagc cgattttgcc
     2581 acaatgtcgg cagcggattt gctaaaactc tccggcaaag ccttagattt aatgagcgaa
     2641 gacttcgatg aggcagacga agaggacagc gaagaacagg gaaagggcga gattttagcc
     2701 taattccaca gtttgttgat gacgctattg ctgatattgc taccgtgttt cattggacac
     2761 ccaacacctt tgatgaaatg acgattgtcg agctagggca atggcgagaa aaggcccgct
     2821 tacgaaatgg ggtggaaagt taaaacaagc ggtcgttttt cgcaaaaaat ttgcaaaact
     2881 cgaccgcttg ctataaggat tttaaaatgg aaattaaaac agttacattc agtaaagtga
     2941 ttacagcatt catttttcat at
//
LOCUS       DANLXD010000169         2948 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.170, whole genome shotgun sequence.
ACCESSION   DANLXD010000169 DANLXD010000000
VERSION     DANLXD010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2948)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2948)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2948
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.170"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..530
                     /locus_tag="PXD18_002486"
     CDS             <1..530
                     /locus_tag="PXD18_002486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302859.1"
                     /translation="KYILPLIAFTALILFLAIVFPENRYVEHALEPVINLLSGTGKVS
                     SSTDNLVKNHLFLPTLNQFISGDGLYYTETGGYYGGSDSGYIRQVLYGGVSYMLACFA
                     FTYYFVRKVAVNWFEGSWIFTLSTIGILAILNIKADTFAFPGLMMLFLMFLSLFGTSG
                     RNVTFFCKNKEAEYV"
     gene            523..1488
                     /locus_tag="PXD18_002487"
     CDS             523..1488
                     /locus_tag="PXD18_002487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005578999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDL6302860.1"
                     /translation="MFSIIVPSYNRNQEINALLESLKQQTAYNFEVIIVDDCSKIPVS
                     ETLGILNEFNDISTKEKVRELLTRDSLSHIYSYPFDVKVVRNNPNVGAAQSRNVGATN
                     ATQEWLLFLDDDDRFMPEKCERLAAEIANNPTANFVYHPAKCEMVNEGFTYVTKPFKH
                     KSELTKENILKANKIGGMPMIGLKKSLFCKIGGLSDRLRSLEDYDFLLKLLEEPSFEP
                     LYVDEALTYCTFHTKRSSVSTDTTNTEKAIEYIQQTYIKTPEANNFKLNSLYILSYPH
                     VMNLSRKAAGYYFEMFKQTKNIKQLIIALVIFISPKLAINLKRFM"
     gene            1488..2288
                     /locus_tag="PXD18_002488"
     CDS             1488..2288
                     /locus_tag="PXD18_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_162680708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL6302861.1"
                     /translation="MKFSVLMSLYIKEQPQYLRECFESLKVQTVQADEIVVCFDGAVT
                     PELEAIVEEYSAILPINAVKFPQNRGLGKTLNDGLTYCKNEWVFRMDTDDICMPERFE
                     KQVAFIEQNPETVIFGGQIAEFGQDIHDLVAYRNVPTTVEEIVRFTRLRCPFNHMTVA
                     YQKSKVLEVGGYQDLQEDYYLWIKLIAQFKQVANLPDLLVYARVGNGMVGRRRGMAQA
                     EAEWRLYKLKNRCQIHDPISGFGIFIMRAIPRLLPVSALKKVYGLLRK"
     gene            complement(2325..2831)
                     /gene="msrA"
                     /locus_tag="PXD18_002489"
     CDS             complement(2325..2831)
                     /gene="msrA"
                     /locus_tag="PXD18_002489"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDL6302862.1"
                     /translation="MQNIREIYLAGGCFWGVESFMQRIKGVIKAQSGYANGNTDNPSY
                     QEVCAGSGHAEVVKVTYDANQISLAKLLDYFFKVIDPVSINKQGGDIGIQYRTGIYYT
                     DPQDEPVVTAALAQLQTQFDQPLAVENQMLEQYFPAEEYHQEYLVKNPNGYCHIDIQL
                     MNEILKNQ"
BASE COUNT          878 a          512 c          609 g          949 t
ORIGIN      
        1 ggaaatatat attgccactg attgccttca ctgcgttaat tctatttttg gcgattgttt
       61 ttccggaaaa ccgttatgtt gaacacgcct tagaaccggt aattaattta ttgtccggca
      121 ccggaaaagt cagctcttca accgataatt tagtgaaaaa ccatctgttt ttaccgactt
      181 taaatcagtt tatttccggt gatggtttat attacaccga aactggtggc tattatggtg
      241 gatcggattc cggctatatt cgccaagtat tatatggtgg agtaagttat atgttggcgt
      301 gttttgcctt cacttactat tttgtacgca aagtggcggt gaattggttt gaaggcagtt
      361 ggatttttac cttatccacc atcggcattt tagctatttt aaatattaaa gcagatacct
      421 ttgctttccc ggggctgatg atgctgtttc taatgttctt gtcgctgttt ggaacaagcg
      481 gtcgaaatgt aacatttttt tgcaaaaaca aagaggctga atatgtttag tattattgtg
      541 ccttcttata accgtaatca agaaatcaat gcgttgcttg agagtttaaa gcaacaaact
      601 gcatataatt ttgaagtgat cattgttgat gactgctcaa aaataccggt cagtgaaact
      661 ttaggaattt taaatgaatt taacgatatt tctactaaag aaaaagtaag agaattactt
      721 actagagata gtttatctca tatttatagc tatccatttg atgtgaaagt ggtgcgaaat
      781 aacccaaatg ttggggcggc acaaagccga aatgtagggg caactaatgc cacacaagaa
      841 tggctactgt ttttagatga tgatgaccgc tttatgcctg aaaaatgcga acgtttagcg
      901 gcagagattg cgaacaatcc aactgccaat tttgtgtacc acccggcaaa atgtgaaatg
      961 gtaaatgagg gttttactta tgtcaccaag ccgtttaaac ataaaagtga gctaactaaa
     1021 gaaaacattc taaaagcgaa taaaattggc ggaatgccga tgattggctt gaaaaaatca
     1081 ctcttttgta aaattggtgg attatctgac cgcttgcgat cacttgaaga ttatgatttc
     1141 ttactgaaat tattggaaga accgagtttt gagccattgt atgtggacga agccttgacc
     1201 tattgtactt tccataccaa acgctccagt gtttcaaccg ataccactaa tacagaaaag
     1261 gctattgagt atattcaaca aacgtatatc aaaacacctg aggcgaataa ttttaagctc
     1321 aattcgcttt atattttaag ttatccacac gtaatgaatt tatcccgcaa ggcagccggt
     1381 tattattttg agatgtttaa acagactaaa aatatcaaac aactgattat tgcgttggtt
     1441 atttttattt cgccgaagtt ggcgattaat ttgaaaaggt ttatgtaatg aaattttccg
     1501 ttttaatgtc gttatacatt aaagagcaac cgcaatattt aagagaatgt tttgaaagct
     1561 tgaaagtaca aactgtgcag gctgatgaaa tcgttgtttg ttttgatggt gcagttacgc
     1621 ctgaattaga ggcgattgta gaagaatata gtgcaatttt gccgattaat gcggtgaaat
     1681 tcccacaaaa tcgaggttta ggtaaaacgc taaatgatgg gctaacctat tgtaagaatg
     1741 aatgggtttt cagaatggat acagacgata tttgtatgcc ggaacgtttc gagaaacaag
     1801 tggcatttat tgaacagaat cctgaaaccg tgatttttgg cggccaaatt gctgaatttg
     1861 ggcaagatat tcacgatctt gtcgcttacc gcaatgtacc aaccacggtg gaggaaatcg
     1921 tcagattcac tcgcttgcgt tgcccgttta accatatgac ggttgcttat cagaaatcca
     1981 aagtgttgga agtcggtggc tatcaagatc tgcaagaaga ttactattta tggatcaaac
     2041 tcattgctca atttaaacaa gtggcaaact tgccggattt attagtgtat gcccgagtcg
     2101 gtaacggaat ggttggcaga cgccgtggaa tggcccaagc agaggcagaa tggcgtttat
     2161 ataaattaaa aaaccgctgc cagattcacg atccgatttc aggttttggg attttcataa
     2221 tgcgtgcaat tcctcgttta ttaccggttt cagcactgaa aaaagtgtac ggtttgctca
     2281 gaaaataaag ctaaaaaaac cacagattgc tctgtggttt tttgttattg attcttcaaa
     2341 atctcattca ttaattgaat atcaatatgg cagtagccgt tcgggttttt tactaaatat
     2401 tcttggtggt actcttcggc agggaaatat tgctctaaca tttggttttc cactgccagc
     2461 ggctgatcaa attgggtttg taattgtgca agtgcggcgg ttaccaccgg ttcgtcttgt
     2521 gggtcggtat aataaatacc ggtgcggtat tgaataccga tgtcgccacc ttgtttgtta
     2581 atgctcaccg ggtctattac tttaaagaag taatctagta attttgccaa gctaatttga
     2641 ttggcatcat aagtcacttt taccacttca gcgtgtccgc taccggcaca cacctcttga
     2701 tagcttgggt tatcggtatt accgttggca tagcctgatt gtgccttaat gacaccttta
     2761 atccgttgca taaaagattc cacgccccag aaacagccac cggctaagta aatttcacga
     2821 atattttgca tattacctct ctataattgt aaatttttcg ataaatttga ctgcttgtga
     2881 tgaataataa aataccataa tttagttttt gtcaaatttt gtcttgaatg atgataattt
     2941 cacaagat
//
LOCUS       DANLXD010000170         2924 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.171, whole genome shotgun sequence.
ACCESSION   DANLXD010000170 DANLXD010000000
VERSION     DANLXD010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2924)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2924)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2924
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.171"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            166..606
                     /locus_tag="PXD18_002490"
     CDS             166..606
                     /locus_tag="PXD18_002490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3577 domain-containing protein"
                     /protein_id="HDL6302863.1"
                     /translation="MTTQTSTQKNYFNLHTTGIGYLSNIRTVTPKKGDEFLACTIGAL
                     IGEAGEGAKAEYRYFDCKVVGEAAIDLVNRAKASVEADKKVLISFVLADLWTDTFTYQ
                     KDGKNHKKGDTGVMLKARLIRIKSVKIDGVVKYQEPEKIDAQSE"
     gene            713..1360
                     /locus_tag="PXD18_002491"
     CDS             713..1360
                     /locus_tag="PXD18_002491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3560 domain-containing protein"
                     /protein_id="HDL6302864.1"
                     /translation="MTINTYAKFAPTVFVAKCPEAHTKGEIITLTSKYGNETEVQIHN
                     LVKQDNEHYYYSFTRCDGMDSQSFAQQKAERYQGYADNATKRSQSWANAANEGLEFLR
                     LGEPIKIGHHSEKRHRNLIERNARRMDNALSEMNKTESYESRIAYWEKMAGKIDLSMP
                     ESLEYFKFELDKAKEKHKELKDNPEKREHGYSLTYAKKAVNELEKKVKLAELLWA"
     gene            1384..1791
                     /locus_tag="PXD18_002492"
     CDS             1384..1791
                     /locus_tag="PXD18_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization protein"
                     /protein_id="HDL6302865.1"
                     /translation="MNRQGVYINGKQVFDSKGKEINSIEIIGSTVQTVVGINKGSISM
                     VSSNNALIVDGQTIAFEPSPTIHIEVFGNITNLNSGAGNVNIKGDVSHIETVSGDVNV
                     DGTVTSDVRTVSGDIRCKTIAGKVETISGDIYR"
     gene            1869..2231
                     /locus_tag="PXD18_002493"
     CDS             1869..2231
                     /locus_tag="PXD18_002493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302866.1"
                     /translation="MKDILLDFDDTSCYLGDWEEILEEYNDRVRVEDFWHYAKEFETV
                     PHLGNLYQEHVILKLIARFCIELDIDQDSGLVEFDYYINAIDTHFYINSQRICDIDDW
                     NEMLDKIREEMTPAKLVA"
     gene            2344..2604
                     /locus_tag="PXD18_002494"
     CDS             2344..2604
                     /locus_tag="PXD18_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302867.1"
                     /translation="MTFELGRVCATRAVAECFNQHTLVDLLHRYCSGDWGNLCDNDKK
                     ANVKAIERGGRILARYDVEDETLYVITEADRSYTTILFPYEY"
BASE COUNT          956 a          492 c          585 g          891 t
ORIGIN      
        1 agcattccga aagggaactc cacaatattg tgggaatgcc gattaaacct ctaccatttc
       61 ggtgaattta catcgaaatt tcatttaact tccaccttgc ggggaacatt tttcccgtgt
      121 tgggtaagga tgtttctccg cttttttact ttggagaaac agactatgac aactcagact
      181 tctactcaaa aaaattactt caatcttcac acaaccggaa tcggctatct gagcaatatc
      241 cgcacagtga ctccgaaaaa aggtgatgaa ttcttagctt gtactattgg tgctctcatt
      301 ggagaagcag gagaaggtgc aaaagcagaa tatcgctatt ttgattgcaa agttgtgggc
      361 gaagctgcga ttgatttggt caatcgggca aaagcctctg ttgaagctga taagaaagta
      421 ctcatctctt tcgttttagc tgacctttgg acagatactt tcacctatca aaaagatgga
      481 aagaatcaca aaaaaggtga tactggtgta atgctgaaag ctcgcttaat tcggattaag
      541 tctgtcaaaa ttgatggagt ggtaaaatac caagaaccag aaaaaataga cgcacaatct
      601 gagtaatttt acctaagccc gacattttat gttgggcttt actttatgtc ccgtagggaa
      661 atgctccctg cggtgtgttt cccttcattt ttacaatttt aggagaaaca ctatgactat
      721 taacacttat gcaaaatttg cacctactgt tttcgtagca aaatgccctg aagcacatac
      781 caaaggtgaa attatcactc taaccagcaa atatggtaat gaaaccgaag ttcaaataca
      841 taacttagtg aagcaggata atgagcatta ttactattct ttcactcgtt gtgatgggat
      901 ggatagtcag tcatttgctc aacaaaaagc agaacgctat caaggctatg cagataatgc
      961 aaccaaacgc agccaaagct gggcaaatgc agctaatgag gggctggagt ttttgagact
     1021 aggtgagcca ataaaaattg ggcatcatag tgaaaaacgc caccgtaacc tcattgaacg
     1081 taatgcccgt cgaatggata atgcgctttc agaaatgaac aaaacagaaa gctatgaatc
     1141 ccgtattgca tattgggaaa aaatggcagg gaaaattgac ctttctatgc cggaaagtct
     1201 ggaatacttt aagtttgaat tggataaagc caaagaaaag cataaagaat tgaaggacaa
     1261 ccctgagaaa cgagagcatg gttattcact gacttatgct aaaaaagcag ttaatgaact
     1321 tgagaaaaaa gtgaaattag ctgaattact ttgggcataa tttttacata gaggattatt
     1381 aatatgaatc gacaaggcgt ttatatcaat ggtaaacaag tctttgactc taaaggcaaa
     1441 gagattaata gcattgaaat cattggtagc acagtgcaaa cagtcgttgg gataaataaa
     1501 ggatctatct caatggtctc cagcaacaat gcattaattg ttgatgggca aacaattgca
     1561 tttgaacctt ctccgactat ccatattgaa gtatttggta atattaccaa tctcaattca
     1621 ggagcaggaa atgtgaatat caaaggtgat gtaagccata tagagactgt gagtggtgat
     1681 gtgaatgttg atggtactgt gacttcagat gtaagaacag taagcggtga tattcgctgt
     1741 aaaactattg caggtaaagt cgaaaccatc agcggagata tttatcgcta atttttgcta
     1801 cttaccctat cgggaaacat tcccgatagg tgtgtttccc cacttttatt taaattttgg
     1861 agaaacatat gaaagacatt cttttggatt ttgatgacac ctcttgttat ttaggtgatt
     1921 gggaagagat actagaagaa tacaatgatc gtgttcgagt tgaggatttt tggcattacg
     1981 ctaaagaatt tgaaaccgta cctcatttgg gcaacctata ccaggagcat gtcatcctga
     2041 agttgattgc tcgattctgt attgaactgg atattgatca agattcaggt ttagtcgaat
     2101 ttgattatta tatcaatgca atagatacgc atttctatat taatagccaa agaatctgtg
     2161 atatagatga ttggaatgaa atgttagata agattcgtga agaaatgacg ccggctaaat
     2221 tagttgccta atttttgcaa atttttacta aaaatgacgc ttactgtcgt cttaattcac
     2281 ccacttgggg aaatatctcc ccaatgggat gacatttccc ctctttctgt ttaggagaaa
     2341 tgtatgacat ttgagcttgg tagagtatgt gcaactcgtg cagttgctga atgtttcaat
     2401 caacatacat tagttgatct acttcatcgc tactgcagtg gtgattgggg aaatttgtgt
     2461 gataacgaca agaaagccaa tgtgaaagct attgaacgcg gaggacgcat tttagctcgc
     2521 tatgatgtgg aagatgaaac actttatgta atcacagagg ctgatcgtag ttacactaca
     2581 attttatttc cttatgaata ttaatggagc ttccatttat accctacatt tttatgttat
     2641 caaacgccgt caaatgatgg cgtttttcta ttttatatct ttcgatttta tagttgtttc
     2701 aatatgcaat tttaattatt tttcctcttt gtagaacaat tacaaatgaa ttaagcatgg
     2761 aaaaacaaat atataacaga agaaaaacat tattcggcaa tgaggagacg gctgcacttt
     2821 attatgcagc taaagacatt atctttgaat atgaaattta caaaccttat tctatctatg
     2881 atgatgaaac catttcttct ctaactttat ttaactgttt taga
//
LOCUS       DANLXD010000171         2923 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.172, whole genome shotgun sequence.
ACCESSION   DANLXD010000171 DANLXD010000000
VERSION     DANLXD010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2923
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.172"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            395..688
                     /locus_tag="PXD18_002495"
     CDS             395..688
                     /locus_tag="PXD18_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HDL6302868.1"
                     /translation="MFKVIFMALSAIVNYLISDFLIKGVIFLSVYFLTSELLPVVIEM
                     LVSRKLIPDLNALFGQLPESMWYFLNIFQIPMAISLMISAMISRFVRRMPFIG"
     gene            698..1237
                     /locus_tag="PXD18_002496"
     CDS             698..1237
                     /locus_tag="PXD18_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005566788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302869.1"
                     /translation="MAVSAYIGIPGSGKSYEVVKSVILPAVASNRRVVSNIYGLNKEK
                     IHQYLLRKNKKLMIEELGEVIYVTNEQCLESDFLPSMDEQDSFCKAGDLIIIDEVWRI
                     WGNDKDIPKNHRSFIAEHRHFADPITGVTCDLVVINQDISQIPRFIKEGLRQLTECKN
                     TLVWGCVIVIGLMFFKERI"
     gene            1168..1731
                     /locus_tag="PXD18_002497"
     CDS             1168..1731
                     /locus_tag="PXD18_002497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302870.1"
                     /translation="MQKHVGLGLRNRYRVDVFQGKNLAKKNRTNSYQEKYDKKIFELY
                     KSYESDGAREAVTDSRQSIFSSFWVKVWIILLPLALFYCGYNLYIFLNGSESEVSHNT
                     EQAKFASDENHNDIVIHLLPTIGKPLSTKWRITGELKRDNKSFVILADNENRLRLEPS
                     SQFSFSGRMLQGEIDGGIVSYFSGESK"
     gene            1728..2861
                     /locus_tag="PXD18_002498"
     CDS             1728..2861
                     /locus_tag="PXD18_002498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspD"
                     /protein_id="HDL6302871.1"
                     /translation="MKIHQLGLLLMISSFSYAKNVDFKLEAVPLPKAISIIYDEVLQK
                     PYMLDPKLSNDSRVISFHTTEQQNFEQFIQRYFSNMNISVSEKKGVVYIGHIEPKQPK
                     VIKRSFVYSPIHRDVDYLASFLKDGTEGNQVFASGDKLVYYGTSEDIARVKSILKSID
                     TKSREVVVTGYVFEVQNIEKEGSGINLLAKLLSGKLGISVGYKQSYENFITVNAGSLD
                     AMFELFRTDQRFRVVSSPTLRVKSGSRGNFSVGSDVPVLSNVTYQDGRPIQSIEYRSS
                     GVIFDIQPTIKDKAIDLKIQQLSNFIKTDTGVNNSPTLVKRDLVTDVTVKSGDVIVLG
                     GLAENKISNGETSFSLLPKGWLSGKSNENTKTDIIVLLQVKEI"
BASE COUNT          974 a          399 c          579 g          971 t
ORIGIN      
        1 ttgttagaat aaaacatgag agtttccttt ttgtttagat tgatttttga cactcatatt
       61 ctaaacggga aactctcact ttttagagtg aattgtcaga tcaagtctga tcttctacac
      121 ctgatattaa tttgcctgat ctggaagttc ctacggcgga atcaattata tcccctttta
      181 aaaaattgct accagattta cagaattttg aactgaataa acgaaccgca caatgccctg
      241 tttggacatt taatattgaa tacttgagat ttcattatga acttagagaa cattgcgatt
      301 tgatagaacc acataaagaa atcttaaagc tattattcgg cattatttgg gcgtttattg
      361 ctttacgtta tgtattaagt gcttaggagg ataaatgttt aaagtgattt ttatggcact
      421 atcagcaatt gtgaattatt tgatttcaga ttttttaatt aagggtgtca tatttttatc
      481 tgtctatttt ttaacttctg aactacttcc tgtagtaata gagatgcttg tgtctagaaa
      541 attgatacct gatttaaatg cgttatttgg gcaattgcct gaaagtatgt ggtatttttt
      601 aaatattttt cagataccaa tggctatttc tttaatgatt tcagcaatga tttcacgttt
      661 tgttagacgt atgccattta ttggatagag gagtgctatg gctgtttcag cgtatatagg
      721 gattcctgga agcggcaaat cgtatgaagt ggttaagtca gtaattttac ctgctgttgc
      781 ttcgaatcga agagttgttt ccaacattta tggattaaat aaagagaaaa ttcatcaata
      841 tttactgcgt aaaaataaaa aattaatgat tgaagagctt ggtgaagtca tatatgtaac
      901 gaatgaacaa tgcttggaat cggatttttt accatcaatg gacgaacaag attcattttg
      961 caaagctggg gacttgataa ttattgatga agtttggcgt atttggggaa acgacaagga
     1021 tattccaaaa aatcatcgtt catttattgc tgaacatcga cattttgcag atcctataac
     1081 aggtgtaact tgtgatttag tcgtaataaa tcaagatatt tctcaaattc caagatttat
     1141 taaagaagga ttgagacaac ttaccgaatg caaaaacacg ttggtttggg gttgcgtaat
     1201 cgttatcggg ttgatgtttt tcaaggaaag aatttagcta aaaagaaccg gacaaattct
     1261 tatcaagaaa aatatgataa aaaaatattt gagctttata aatcttatga atctgatggt
     1321 gcaagagaag cggttacaga tagtaggcaa tctatatttt catctttttg ggtcaaggta
     1381 tggattattc ttttaccatt ggcattattt tattgtggct ataaccttta cattttccta
     1441 aatggttcag agagtgaagt aagccataat actgaacagg ctaaatttgc ttctgatgaa
     1501 aaccataacg atatagtaat tcatttactt cctactattg gaaaaccttt atcaactaaa
     1561 tggcgaataa caggggaact aaaaagggat aataaatcat ttgtgatctt agctgacaat
     1621 gaaaaccgtt taagacttga gcctagtagc cagtttagtt ttagcggtcg aatgttgcaa
     1681 ggagagatag atggtggaat agttagttat ttttcgggag aatctaaatg aaaatccatc
     1741 aattagggct attgctcatg attagctcat tttcttatgc taagaatgtt gattttaaat
     1801 tagaagctgt gccgttaccg aaagcaatat caataatata cgatgaagtg ctacaaaagc
     1861 catatatgct tgatcctaaa ttatctaatg attcaagggt tattagcttt catacaacag
     1921 agcaacagaa ttttgagcag tttattcaac ggtatttcag caatatgaat atcagtgtat
     1981 cagagaaaaa aggtgttgtt tatattggac atattgaacc aaaacagccg aaagtaataa
     2041 aacgtagttt tgtgtattcg cctattcatc gtgatgttga ttatttggct agcttcctga
     2101 aagatggaac agaaggaaac caagtttttg caagtggcga caagcttgta tattatggta
     2161 cttctgaaga tattgcacga gtgaaaagta tcttgaaatc aatcgacaca aaaagccgtg
     2221 aagtagtggt aactggttat gtttttgaag tgcagaatat tgaaaaagag ggtagtggca
     2281 taaacttgtt agcgaaattg ctatcaggaa aattaggcat tagtgttggt tacaagcaaa
     2341 gttatgaaaa ctttatcacc gtgaatgcag gaagtttaga tgcaatgttt gaattgtttc
     2401 gcacagatca gcgttttagg gttgtcagca gtccgacatt aagagtaaaa tcaggctcaa
     2461 gaggtaattt ttcagtaggc tctgatgtcc ctgtattatc gaatgtaacc tatcaggacg
     2521 gaaggcctat tcagtcgatt gaataccgtt caagcggtgt aatatttgat attcagccaa
     2581 cgataaaaga taaagcgatt gatttaaaaa ttcaacaact atcaaatttc atcaaaacag
     2641 ataccggtgt aaataatagc ccaacgttgg taaagcgtga tctggtaaca gatgttacgg
     2701 ttaaaagcgg tgatgttatc gttttaggtg ggttagctga aaataaaata tctaatggcg
     2761 aaaccagttt ttcattgcta cctaaaggtt ggttaagtgg aaaatcaaat gaaaatacta
     2821 aaacagatat tatagttctg ctacaagtaa aggaaattta atatgtatga ggaaaattta
     2881 gattataaat tgtcattaaa tgaatttaag tcgcttttgt cag
//
LOCUS       DANLXD010000172         2887 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.173, whole genome shotgun sequence.
ACCESSION   DANLXD010000172 DANLXD010000000
VERSION     DANLXD010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2887)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2887)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2887
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.173"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..1892
                     /locus_tag="PXD18_002499"
     CDS             <1..1892
                     /locus_tag="PXD18_002499"
                     /inference="COORDINATES: protein
                     motif:HMM:NF024398.1,HMM:NF024914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL6302872.1"
                     /translation="AQEKRAGHYAKLEKSLMDNSILKDRIKRLERSQDSLKKTLTWLL
                     GDALLKCKTLKGLICFPFNAFQAYSKFKTYQQEKKVNNISISKATSESIIDKEQSCSK
                     VNIHNDTQSSIDISILGWPTPNTDKPITIMSIADVFTTSNLKSVANLITPRPDNWKGL
                     LNRDNPALLFVESAWNGNQNSWQYRVGSYVNPPGKELFEAISAFKQKGLPTVFWNKED
                     PVHFDKFKNSAKEFDFIFTSDEGSIPAYQKISNARVFALPFAADSQVNNPIGSTNREG
                     DVCFAGSYYANRFIERKNDQLMLLESALPYGLDIYDRNAGNTNKDFHYPEQFDDCVKG
                     SLSYDQMNEAYKKYKVFLNVNSVIDSKTMFSRRVFELLASGTPIVSTPSLGIEEFFGN
                     DLVWIVKDRTEAQEAIRTLLNDKKEWRRRSLQGIRKVFSEHTFQDRFNFILKNTGLLT
                     TEPNKSKILCCIEAYKKKDIDFLTMALNTQERKDKFELVPLVILRNKKLSTTLPNVID
                     LKSTTSSIIFQYIKQNEMDFVSIFSSKYIYAKNYLLDLYLTTIYADADIISKPEQDSY
                     AYSAVFLPAGSLFKAKIFKTNSSLPLSDKFEYIQTKLSVFMPDSANFAKRQGNDKKLL
                     KQIEI"
     gene            1909..>2887
                     /locus_tag="PXD18_002500"
     CDS             1909..>2887
                     /locus_tag="PXD18_002500"
                     /inference="COORDINATES: protein motif:HMM:NF012744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDL6302873.1"
                     /translation="MNNVKKVLVSGYDLKFWNALQSELEKTGLFEFKQDTLIGNYGHN
                     DHKALELIEWADILVAEWTLNNAVFLSKHKKPYQKLIMRFHAQERLTEYPNQIDYSVV
                     DTIIFVGSHVMDEAINKFNIPAFKCCVVGNYIDVDRFSLPKMGDEYNIGMVGIVPKLK
                     RLDLAFDVLEELLKFNSNYRLHIKGQSPMNYPWLWKRENEKKYYYELFERINSSELRN
                     HIVFDPAGNDVEFWFQKIGYILSPSDFESFHAAVAEGTASSSLPVVWNRDGVRDIYSS
                     FQLVDNPKNAAKFIDLMRRSNVRERLLVHSRNLIINKYNKNVIAKQFVDI"
BASE COUNT          995 a          397 c          533 g          962 t
ORIGIN      
        1 tagctcaaga aaagagagcc ggtcattatg caaaattaga aaaatcttta atggataatt
       61 ctattcttaa ggatagaatt aagcgtttgg aacgttctca agatagtcta aagaaaactc
      121 tgacttggtt gcttggagat gcattgctta aatgtaaaac gttaaaaggt ttaatttgtt
      181 ttccttttaa cgcttttcaa gcatacagta aatttaagac ttatcaacaa gaaaagaaag
      241 ttaataatat ttctatatca aaagcaactt ctgaatctat catagataaa gagcagagtt
      301 gctctaaagt aaatattcat aacgatactc aaagtagtat agatatcagc attttagggt
      361 ggccaacgcc aaatacagat aaaccgatta ctattatgag tattgcagat gtatttacca
      421 catcaaactt aaaatctgtt gcaaatttaa ttacacctcg accagataac tggaaaggat
      481 tgctcaatcg agacaatcct gctttgcttt ttgttgaatc agcttggaat ggtaatcaaa
      541 attcttggca gtatcgagtg ggaagctatg taaatcctcc aggtaaggaa ttatttgaag
      601 ctatttctgc ttttaagcaa aaagggctac caacagtatt ttggaacaag gaggatcctg
      661 ttcactttga taaattcaaa aattctgcta aagagtttga ttttattttt acttcagatg
      721 aaggaagtat tccagcttat caaaaaatca gcaatgctag agtatttgcc ttaccttttg
      781 ctgccgacag tcaagtgaat aaccctattg gtagcacaaa tagagagggt gatgtttgct
      841 ttgctggcag ctattatgct aatcgtttta ttgagcgaaa aaacgatcaa ttaatgttgc
      901 tagaaagtgc tctaccttat ggattggata tttatgatcg taatgcaggg aatacgaata
      961 aagattttca ttatcctgag caatttgatg attgtgttaa aggttctttg tcatacgatc
     1021 agatgaatga agcctataag aaatataagg tttttttaaa tgttaattcg gtaattgatt
     1081 caaaaacaat gttctctcgt cgagtgtttg agctactagc ctctggtaca cctattgtta
     1141 gcacaccatc tctaggtatt gaagagtttt ttggaaacga tttggtttgg atagttaaag
     1201 atcgaactga agctcaagaa gcaattcgta cattgcttaa tgataaaaaa gagtggagaa
     1261 gacgcagttt gcaaggcatt cgtaaagtgt tttcagaaca tacttttcaa gacaggttta
     1321 attttatttt gaaaaatact ggtttgttaa ctacagaacc gaataaatct aaaattttat
     1381 gctgtataga agcatacaaa aaaaaagata ttgactttct aacaatggct ttaaatacac
     1441 aagaacggaa agacaaattt gagttagtgc cgttagttat tttgagaaat aagaaattat
     1501 caacaacatt accaaatgtg attgatttaa aatcaacgac ttcaagcatt atttttcaat
     1561 atattaagca aaatgaaatg gattttgtct ccattttttc aagcaagtat atttatgcta
     1621 agaactattt attagatctt tacttaacga ctatttatgc tgatgctgat atcattagca
     1681 aaccggagca agatagctac gcttattcag cagtattttt accggcaggc tctttattta
     1741 aggctaaaat ttttaagact aattcatcat tacctctatc agataagttt gaatatattc
     1801 aaacgaaatt atcggtattt atgcctgatt ctgcaaattt tgcaaaaaga cagggaaatg
     1861 ataaaaagtt gttaaaacag attgaaattt aaatactggg gtaaaagaat gaataacgtt
     1921 aaaaaagtgc ttgtttcggg atatgattta aaattctgga atgctttaca atctgaactt
     1981 gaaaaaactg ggttatttga atttaagcaa gataccttaa tcgggaatta tggtcataat
     2041 gaccacaaag cattagagct tattgaatgg gcagacattc tagttgcgga atggactcta
     2101 aataatgctg tttttttatc aaagcataaa aagccatatc aaaaattgat aatgcgtttt
     2161 catgctcaag aaaggttgac tgaataccct aatcagattg attattctgt tgttgatacc
     2221 ataatatttg tcggaagtca tgttatggat gaggcaatta ataaatttaa tatacctgca
     2281 tttaagtgct gtgttgttgg gaattatatt gatgtggata gattctcatt acctaaaatg
     2341 ggagatgagt ataatattgg gatggttggt attgttccta aacttaaaag attagatttg
     2401 gcttttgatg tattagaaga gcttctaaaa tttaattcta actatcgctt acatataaaa
     2461 ggacaatcgc caatgaatta tccttggtta tggaagagag agaatgaaaa aaaatattac
     2521 tatgagttgt tcgaaagaat taattcatcg gaactaagaa accatatagt ttttgatcca
     2581 gcaggtaatg atgtggaatt ttggtttcag aaaataggat atattttatc tccttctgat
     2641 ttcgagagtt ttcatgcagc ggttgccgag gggactgctt cctcatctct tccggttgtt
     2701 tggaatcgtg atggagtaag ggatatttat tcttcgtttc aattagttga taatcctaaa
     2761 aatgcggcaa aatttattga tttaatgaga cgctcaaatg tgcgagagag gttgcttgtt
     2821 cattctcgca atctaattat caataaatat aataaaaatg ttattgctaa acagtttgta
     2881 gatatct
//
LOCUS       DANLXD010000173         2869 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.174, whole genome shotgun sequence.
ACCESSION   DANLXD010000173 DANLXD010000000
VERSION     DANLXD010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2869)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2869)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.174"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..1103
                     /locus_tag="PXD18_002501"
     CDS             <1..1103
                     /locus_tag="PXD18_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="porin"
                     /protein_id="HDL6302874.1"
                     /translation="ALAVTAFAASASATTVYDAEGSKVDFDGSLRIVLDRTNSKELDN
                     HNVVKTKKNAHTGIRNTGSRFGVRVKHDLAQDFYALGRVEFRFNKNTSDDGFGDLYTK
                     RAYVGLGSKQYGELTFGRQVTIADDLSQSVDYNYGINPKGDYIQTDGNQVIRYNYRGV
                     ENLHVSANYNFAQDRKDGKVLANKLQNAYGIGALYTVDNWDLRAAYGHTNYKTATDST
                     KHRKDGVLGSVGYKFGDLKLSVDTGYSREKGLAVTDDNGVTTFYNGVKSNAFYVSPNF
                     EYQVVPASKVYGNYLYERVKSKSNGSTYAAGKEKTHGFLLGVDYQFHKQVVAFVEGSY
                     TRTKDYDKVTNGYKYSGKSTNKAIGVGMRVYW"
     gene            complement(1256..2620)
                     /gene="glmU"
                     /locus_tag="PXD18_002502"
     CDS             complement(1256..2620)
                     /gene="glmU"
                     /locus_tag="PXD18_002502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HDL6302875.1"
                     /translation="MTQLSVVILAAGKGTRMYSDLPKVLHPVAGKPMVKHVIDTAKQL
                     DAQQIHLIYGHGADLLKARLSEEPVNWVFQAEQLGTGHAMQQAAPFFADDENIVMLYG
                     DAPLITKATLERLIAAKPENGIALLTVELENPTGYGRIIRENGSVVAIVEQKDANEAQ
                     LKVKEVNTGVMVASGASFKKWLKNLNNNNAQGEYYITDVIAMANQEGFKVQAVQATEF
                     MEVEGANNRLQLAALERFYQKREAEKLLLAGVTIIDPSRFDLRGTVTHGKDVQIDVNV
                     ILEGEIKLGNNVKIGAGCVLKNCEIGDNVEIKPYSVIEDSIVGAKSAIGPFSRLRPGA
                     ELAEETHIGNFVEIKKATIGKGSKVNHLTYVGDAEIGKECNIGAGVITCNYDGANKFK
                     TIIGDNVFVGSDSQLIAPVTIASGSTIGAGATVTKDIAENELVISRVPQRHIQGWQRP
                     TKKK"
BASE COUNT          818 a          525 c          558 g          968 t
ORIGIN      
        1 ttgcattagc agtaaccgcg ttcgcagcgt cagcatcagc aaccaccgtt tacgatgcag
       61 aaggttcaaa agtagatttt gatggttctt tacgtattgt tcttgataga acaaattcta
      121 aagagctaga caatcataat gttgttaaaa ctaaaaaaaa tgcacacaca ggaatccgta
      181 acactggttc acgttttggt gtaagagtaa aacatgattt agctcaagat ttctatgcat
      241 taggtcgtgt tgagttccgt tttaacaaaa ataccagtga tgatggtttt ggtgatttat
      301 atactaaacg tgcttatgtt ggtttaggta gtaagcaata tggtgaatta acttttggtc
      361 gtcaagtaac gattgctgat gatttaagtc aatcagtaga ttacaactac ggtattaatc
      421 caaaaggtga ttatattcaa accgatggta accaagttat tcgttataac taccgtggtg
      481 ttgaaaactt acatgtaagt gcaaactata actttgcaca agatcgtaaa gatggtaaag
      541 tattagcaaa taaacttcaa aatgcatacg gcattggtgc attatacact gtagataact
      601 gggatttacg tgcagcttat ggtcatacaa actacaaaac agctactgat agcactaagc
      661 accgtaaaga tggtgtatta ggttctgttg gttataaatt tggtgactta aaattaagtg
      721 ttgatacagg ttattctcgt gagaagggtt tagctgttac ggatgataat ggtgtaacta
      781 cattctataa tggtgttaaa tcaaacgctt tctatgtatc tccaaacttt gaatatcaag
      841 tagtgcctgc atctaaagta tatggtaact acttatatga gcgtgtgaaa tctaaatcaa
      901 atggttctac atatgctgct ggtaaagaaa aaactcatgg tttcttactt ggtgttgatt
      961 accaattcca taaacaagta gttgcttttg ttgagggttc ttatactcgt actaaagact
     1021 atgataaagt aactaatggt tataaatact caggcaaatc aactaacaaa gctatcggtg
     1081 ttggtatgcg tgtatactgg taatcaattg attttctaaa ttgataaacc cctaacaata
     1141 tttattgtta ggggttttgt tttaaatata ttgttcatta tcctttttaa agtgtatggc
     1201 tttgctgtta ttggcaaagc caatttttaa atataataac ttttgaccac tggcactatt
     1261 tctttttagt cgggcgttgc cagccttgaa tatggcgttg tggtacacgg ctaattacca
     1321 gttcattttc cgcaatgtct ttagtgactg ttgcaccggc accaatggtt gaaccgctgg
     1381 caatcgtgac cggggcaatg agttggctgt ctgagccgac aaatacgtta tcgccaataa
     1441 tggttttgaa tttattcgca ccatcatagt tacaagtgat tacacctgct ccgatgttac
     1501 attctttgcc gatttccgca tcgcctacat aagtgagatg atttactttt gaacctttgc
     1561 cgatggtagc ttttttgatt tccacaaagt taccgatatg ggtttcttcc gctaattctg
     1621 cccccgggcg taagcgagag aatggaccga tagcggattt tgccccgaca atcgaatctt
     1681 caatcacaga ataaggttta atttcaacat tatcgccaat ttcgcagttt ttcagtacgc
     1741 agcctgcacc aatttttaca ttgttaccga gtttgatttc accttctaga atgacattca
     1801 catcgatctg aacatctttt ccgtgggtga cagtgccacg aagatcaaaa cggcttgggt
     1861 cgataatagt tacaccagcc aataacagtt tttccgcctc acgtttttgg tagaaccgtt
     1921 caagtgcagc aagttgcaaa cggttgtttg ccccttctac ttccataaat tcagttgcct
     1981 gaaccgcttg tactttaaag ccttcttggt ttgccattgc gatcacatca gtgatgtaat
     2041 attcaccttg agcattgttg ttatttaggt ttttcaacca ttttttgaag ctcgcaccgc
     2101 ttgctaccat cacgccggta ttcacttctt tgactttaag ctgtgcttca ttggcatctt
     2161 tttgctcaac aatcgctacc acagaaccat tttcacgaat aattcgtccg tagcctgtcg
     2221 ggttttccaa ttcaacggtt agtaatgcaa taccattttc cggtttggct gcgattaaac
     2281 gctctaaagt ggcttttgtg attagggggg catcaccata aagcattaca atgttttcat
     2341 catcagcgaa aaaaggagct gcttgttgca ttgcatgtcc tgtgcctaat tgttcggctt
     2401 ggaataccca gtttacaggc tcttcgctta aacgtgcttt taacagatcg gcaccgtgtc
     2461 cgtaaattaa atgaatttgc tgggcatcta gctgtttggc agtatcaata acgtgtttta
     2521 ccatgggttt accggcaact gggtgtaaca ctttgggtaa atctgaatac atacgagtgc
     2581 ctttaccggc agctaaaata acaacgctca gttgagtcat atagaatcct tatttgacta
     2641 aatagatgaa ggcttatagt aacgtgtaaa ttgctataag tgatattttt gtaatatttt
     2701 aaccttttta taagtggatt tcatcgacaa gcaaaagaaa tttgtctgtt tgttatcttt
     2761 ttctattatg tcgattctta tcttgtggaa aactggtata aataggtagc acttatttgt
     2821 gctatctctc tacaatagtg tatatctttg ctaaaatatt aaattaatt
//
LOCUS       DANLXD010000174         2812 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.175, whole genome shotgun sequence.
ACCESSION   DANLXD010000174 DANLXD010000000
VERSION     DANLXD010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2812
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.175"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            162..452
                     /locus_tag="PXD18_002503"
     CDS             162..452
                     /locus_tag="PXD18_002503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000027827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HDL6302876.1"
                     /translation="MALRPLHDKVILKREEVETKSAGGIVLTGSAATKSTRGKVIAVG
                     TGRILDNGSVQPLAVKVGDVVIFNEGYGVKTEKIDGEEVLILAEHDILAIVE"
     gene            521..2161
                     /gene="groL"
                     /locus_tag="PXD18_002504"
     CDS             521..2161
                     /gene="groL"
                     /locus_tag="PXD18_002504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608625.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HDL6302877.1"
                     /translation="MAAKDVKFGNDARVKMLKGVNILADAVKVTLGPKGRNVVLDRAY
                     GAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNE
                     GLKAVAAGMNPMDLKRGIDKAVAAVVEELKAISKPCETSKEIEQVGTISANSDSTVGQ
                     LIAQAMEKVGKEGVITVEDGTGLEDALDVVEGMQFDRGYLSPYFINKPEAGTVELENP
                     YILLVDKKVSNIRELLPVLEGVAKAGKPLLIIAEDIEGEALATLVVNTMRGIVKVAAV
                     KAPGFGDRRKAMLQDIAILTAGTVISEEIGMELEKATLEELGQAKRVVISKDNTTIID
                     GIGDETQIKGRVAQIRQQIEDSTSDYDKEKLQERVAKLAGGVAVIKVGAATEVAMKEK
                     KDRVDDALHATRAAVEEGIVPGGGVALVRAANKVADTLKGDNEEQNVGIKLALRAMEA
                     PLRQIVANAGEEASVVARNVKEGSGNYGYNAGTEQYGDMLEMGILDPTKVTRSALQFA
                     ASIAGLMITTECMITDLPKEEKLDPAAMGGMGGMGGMM"
     gene            complement(2286..2612)
                     /locus_tag="PXD18_002505"
     CDS             complement(2286..2612)
                     /locus_tag="PXD18_002505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5339 domain-containing protein"
                     /protein_id="HDL6302878.1"
                     /translation="MLKRILGITLCTILVSSNAIASVKTSSLTVAKPTLSKNLPTECE
                     KMFNTANKLVSDAERQPGTHTQVLKMKNKLSLTKQQILKMDSELQQKSCEKGLTALNS
                     LKQKHQ"
BASE COUNT          903 a          445 c          647 g          817 t
ORIGIN      
        1 tttcttaggt atatagtttt atcaaaaatg gtcaaatttg taaaaaattt tacaaatttg
       61 accgcttgca cttgaaactc taaaatctgc ctttatattg ttaggcgtta cgcattttgc
      121 gtgaagtttt atttattcat ttttaagaaa aggaacatat tatggcactt cgtccattac
      181 acgataaagt tattttaaaa cgtgaagaag ttgaaacaaa atcggcaggc ggtattgttt
      241 taaccggttc ggcagcaaca aaatcaaccc gtggcaaagt aattgcagta ggaacaggtc
      301 gcattttaga caatggttct gttcagcctt tagcagttaa agtgggcgat gtagtgattt
      361 ttaacgaagg ctacggcgta aaaaccgaga aaattgacgg cgaagaagtg ctaattttag
      421 cagagcacga tattttggcg attgtagaat aatttcgttc tgcacaagcg gttaaaaaag
      481 caaaattttt tacatatttc aaatacaaag gatttagaaa atggcagcaa aagacgtgaa
      541 atttggtaac gatgcacgcg taaaaatgtt aaaaggcgtg aatattttag ccgatgcggt
      601 aaaagtaact ttaggtccga aaggtcgtaa tgtggtgtta gatcgtgctt atggtgcacc
      661 aacgattaca aaagacggtg tgtcggttgc ccgtgaaatc gaattagaag ataaatttga
      721 aaatatgggg gctcaaatgg tgaaagaggt tgcctctaaa gccaatgatg ccgccggtga
      781 cggtacaact accgcaactg tattagctca agcgattgta aacgagggct taaaagcagt
      841 ggctgcgggt atgaacccaa tggatttaaa acgtggtatc gataaagcgg ttgcagcagt
      901 ggttgaagag ttaaaagcga tttcaaaacc gtgcgaaacc tcaaaagaaa ttgagcaagt
      961 agggacgatt tctgcaaact cagattcaac agtcggtcaa ttaattgctc aagcaatgga
     1021 aaaagtgggc aaagagggcg tgattactgt tgaagacggt acaggtttag aagatgcatt
     1081 agacgtggtt gagggtatgc aatttgaccg tggttactta tcgccatact ttatcaataa
     1141 accggaagcc ggtacggttg agttagaaaa cccatatatt cttttagtgg ataaaaaagt
     1201 gtctaacatt cgtgaattat taccggtgtt agaaggtgtt gcaaaagcag gtaaaccgtt
     1261 attaattatt gccgaagata ttgaaggcga ggcgttagct accttagtgg tgaacactat
     1321 gcgtggtatc gtgaaagtgg cggcagtgaa agcacctggc tttggtgatc gccgtaaagc
     1381 aatgttacaa gatattgcga tcttaactgc aggtactgtg atttctgaag agatcggtat
     1441 ggagcttgaa aaagcaaccc ttgaagagct tggtcaagca aaacgtgtgg ttatcagcaa
     1501 agataacacc acaattattg acggtattgg tgatgaaact caaatcaaag gtcgtgtagc
     1561 acaaatccgc caacaaatcg aagattcaac ttcagattac gacaaagaaa aactacaaga
     1621 gcgtgtagca aaattagccg gtggtgttgc ggtaattaaa gtaggtgcgg caactgaagt
     1681 ggctatgaaa gagaaaaaag accgtgttga tgatgctctt cacgcaaccc gtgctgcggt
     1741 ggaagaaggt attgtaccgg ggggcggagt tgctttagtg cgtgcagcca acaaagtggc
     1801 tgatacacta aaaggcgata acgaagagca aaatgtaggt atcaaacttg ccttgcgtgc
     1861 aatggaggct ccattacgcc aaatcgttgc caatgcaggt gaagaagcct cagttgtagc
     1921 ccgcaacgtg aaagaaggtt caggcaacta cggctataac gcaggtacag agcagtacgg
     1981 cgatatgctt gaaatgggaa ttttagaccc aactaaagtg actcgttcag cacttcaatt
     2041 cgcggcttct attgcaggtt taatgatcac tacagaatgt atgattaccg atctgccaaa
     2101 agaagagaaa ttagatcctg ccgcaatggg cggtatgggg ggaatgggcg gaatgatgta
     2161 attgcccatt gagtgaacaa aagctactga aattaattca gtagcttttt tgttggtaac
     2221 aagtggttaa atttatgcta ttttttgcaa ataaaaaacc aagcaagtaa gcttggtttt
     2281 agcgtttatt gatgtttttg tttaaggctg tttagtgctg ttaaaccttt ctcacaactt
     2341 ttttgctgta attcagaatc catttttagg atttgttgct ttgttaaaga aagtttattt
     2401 ttcattttta gcacttgagt atgagtacca ggctgtcttt ctgcatcaga gaccaattta
     2461 tttgccgtgt taaacatttt ctcacattca gttggcaaat ttttacttaa agtaggtttt
     2521 gcaactgtaa gtgatgaggt tttaacactt gctatagcat tactggaaac caatatggta
     2581 caaagtgtta ttcctaaaat tctttttagc atgcgttctc cacacattaa gtgtttaaaa
     2641 gtaaaaatct aatatgttat ttaataaagc ttgctgatgt tatcagaact ttaatttaaa
     2701 gtcatctaaa actaagatct ttttgccaag aataaatttt caagatcgtt agtataaaaa
     2761 atagtaaata aattgttact tatttgttaa gtataaccgt gttatttagt at
//
LOCUS       DANLXD010000175         2673 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.176, whole genome shotgun sequence.
ACCESSION   DANLXD010000175 DANLXD010000000
VERSION     DANLXD010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2673)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2673)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2673
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.176"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            116..1534
                     /gene="leuC"
                     /locus_tag="PXD18_002506"
     CDS             116..1534
                     /gene="leuC"
                     /locus_tag="PXD18_002506"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HDL6302879.1"
                     /translation="MQQAKTLYQKLFDSHVVYEAEGETPIIYINRHLIHEVTSPQAFD
                     GLRVAGRQVRQVSKTFGTMDHSISTQVRDVQQLEGQAKIQVLELEKNCEETGIPLFDI
                     TKKQQGIVHVMGPEQGLTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTL
                     KQARAKSMKVEVRGKVNPGITAKDIVLAIIGKTTMAGGTGYVVEFCGEAIRDLSMEGR
                     MTVCNMAIEFGAKAGIVAPDETTFAYLKDRPNAPKGQDWEDAIEYWKTLKADEGAVYD
                     AEVILEAKDIAPQVTWGTNPGQVIGIDDVIPNPEDMADPVTRASAEKALAYIGLEAHT
                     DMKDVPVDQVFIGSCTNARIEDLRAAAAVMKGRKKADNVKRILVVPGSGLVKEQAEKE
                     GLDKIFIEAGAEWRNPGCSMCLGMNDDRLGEWERCASTSNRNFEGRQGRNGRTHLVSP
                     AMAAAAAVFGKFMDIRKVSLNA"
     gene            1547..2149
                     /gene="leuD"
                     /locus_tag="PXD18_002507"
     CDS             1547..2149
                     /gene="leuD"
                     /locus_tag="PXD18_002507"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HDL6302880.1"
                     /translation="MAGIKQHSGLVVPLDAANVDTDAIIPKQFLQAITRVGFGKHLFH
                     EWRYLDAEETQINPDFVLNFPQYQGATILLARKNLGCGSSREHAPWALADYGFKVMIA
                     PSFADIFYNNSLNNHMLPIKLTEEEVEEIFQWVWANEGKQIHVDLEAMTVTVGEKVYT
                     FELDEFRRHCLLNGLDNIGLTLQHEAAIAAYEKNIPAFLR"
     gene            complement(2221..2661)
                     /locus_tag="PXD18_002508"
     CDS             complement(2221..2661)
                     /locus_tag="PXD18_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302881.1"
                     /translation="MATVAIGLFACTPSPQSNSTKQQAQVGYLKQNISQAELNNPKDF
                     KRYSYYCKNFATGSSSYLATYFPLWSESRKQENFGIYFQLDGGKVYPFDHLANISLNA
                     RATKFEVRYRSYQPIEGSFVELVAREFTSTYYKNNVPWLECREG"
BASE COUNT          787 a          558 c          604 g          724 t
ORIGIN      
        1 tttcattttt ttaatcgtta tattcactcc atatcagcaa gcggtcattt ttgcaaaatt
       61 ttttgcaaat ttaaccgctt gtattaaaag ttaccctttt gagttggaac attttatgca
      121 acaagccaaa accctatatc aaaaactatt cgactcacac gttgtgtatg aagccgaagg
      181 cgaaacgccg attatttata ttaaccgcca cttaattcac gaagttacca gcccgcaagc
      241 gtttgacggc ttgcgtgttg ccggtcgcca agttcgccaa gtcagtaaaa ccttcggcac
      301 aatggaccac agtatttcaa cccaagtgcg tgatgtacag caacttgaag ggcaagcgaa
      361 aattcaagta ttagaattag aaaaaaactg cgaagaaacc ggtatcccac tgtttgacat
      421 cactaaaaaa caacaaggta tcgttcacgt aatggggccg gagcaaggct taactttacc
      481 cggtatgacc attgtatgtg gtgactcgca caccgccact cacggggcct ttggtgcgtt
      541 agccttcggt atcggtactt ccgaagtgga acacgtttta gccacccaaa ccttaaaaca
      601 ggcccgtgca aaaagtatga aagtggaagt ccgtggcaaa gtaaacccgg gcattaccgc
      661 aaaagatatt gtgcttgcga tcatcggtaa aacaactatg gctggcggta caggctatgt
      721 agtggaattt tgtggcgaag caattcgtga tctttcaatg gaagggcgaa tgacagtgtg
      781 taatatggcg attgagtttg gtgcgaaagc cggtattgtt gccccggatg aaaccacgtt
      841 cgcttacttg aaagaccgcc caaatgcacc aaaaggtcaa gattgggaag atgccattga
      901 atattggaaa accctcaaag ccgatgaggg tgcagtttac gatgcggaag tgatcttaga
      961 agcaaaagac attgctccac aagtgacttg gggaaccaac ccggggcagg tgatcggtat
     1021 tgatgatgta attccaaatc cggaagatat ggccgatcct gttactcgtg cctctgcgga
     1081 aaaagcctta gcttacatcg gcttagaagc ccatacagat atgaaagatg taccggttga
     1141 tcaagtcttt attggttctt gtactaatgc tcgtattgaa gatttgcgtg ctgcggcagc
     1201 agtaatgaaa gggcgtaaaa aagccgacaa tgtaaaacgt attctcgttg tgccaggttc
     1261 aggtttggta aaagagcaag cagaaaaaga gggcttggat aaaatcttca ttgaagccgg
     1321 tgcagaatgg cgtaacccgg gttgctcaat gtgtttggga atgaacgatg accgcttggg
     1381 cgaatgggaa cgttgtgcct ctacgtctaa ccgtaacttt gagggcagac aaggacgtaa
     1441 cggtcgtacc cacttagtca gcccggcaat ggcggctgcg gcggcggtgt tcggtaaatt
     1501 tatggatatt cgcaaagtgt cattaaacgc ataataggag gaaaaaatgg caggtattaa
     1561 acaacattca ggcttggtcg ttcctcttga tgcagcgaac gtagacaccg atgcaatcat
     1621 tccaaaacaa tttttgcaag ccattactcg agtcggcttt ggtaagcacc ttttccacga
     1681 atggcgttat ttagatgcgg aagagactca aatcaacccc gatttcgtac tgaacttccc
     1741 acaatatcaa ggtgcaacca ttttactcgc ccgtaaaaat ttaggctgtg gctcttctcg
     1801 tgagcacgcc ccttgggcat tggcagatta cggttttaaa gtaatgatcg ccccaagttt
     1861 tgcggatatt ttctacaata acagcttaaa taaccatatg ttgccgatta aattaaccga
     1921 agaggaagtc gaagagatct tccaatgggt gtgggcaaat gaaggaaaac agatccacgt
     1981 tgatttagaa gcgatgactg tgactgttgg cgagaaagtt tatacctttg agttagacga
     2041 attccgccgc cactgcttat taaacggttt ggataatatc ggcttaaccc tacaacacga
     2101 agctgcgatt gctgcttatg agaaaaacat tccggcattt ttacgctaat taaaatacaa
     2161 aaaaacggct aacatcttta aggcgttagt cgttttcttt ttagccattt tctttggcaa
     2221 ttagccttct cggcactcta accaaggcac attatttttg taataagttg aagtaaactc
     2281 tcgtgccact aactctacaa aactgccttc aatcggctga taagaacgat aacgcacttc
     2341 aaattttgtt gctcttgcat tcaaactgat gttggcaaga tggtcgaacg gataaacctt
     2401 tccgccatca agttgaaaat agataccaaa attctcttgc ttacggcttt cagaccaaag
     2461 tggaaaatag gttgccaaat atgaactgct gcctgttgca aaattcttac aataatagct
     2521 ataacgctta aaatctttcg gattattcaa ttccgcttgg ctgatattct gtttcaaata
     2581 tccaacctgt gcttgttgct tagttgagtt tgattgtggt gagggcgtac aagcaaataa
     2641 gccaattgcc actgttgcca ttaaagcaat ttt
//
LOCUS       DANLXD010000176         2625 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.177, whole genome shotgun sequence.
ACCESSION   DANLXD010000176 DANLXD010000000
VERSION     DANLXD010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2625)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2625)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2625
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.177"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            7..765
                     /locus_tag="PXD18_002509"
     CDS             7..765
                     /locus_tag="PXD18_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDL6302882.1"
                     /translation="MIPLERQREILRLINNNGVASINFLAEQLKVSHMTIRRDIQKLE
                     EQGKVSLVSGGVQSLERLIMELPHDDKSMLFQEQKSAIGSLASQLIPSNTTIYLDAGT
                     TTLEIAHRIIDRNDLLVVTNDFVIAHYLSNSGKCDLIHIGGSVCKENLSTTGSLAAEF
                     LKNLSIDMAFISTSSWNLKGLTTPNENKIPVKKAILEASKQNILVTDSSKYGKVATFF
                     VCPLTVFDQIICDKGLFENVRDALKGLSIKLDLG"
     gene            complement(905..2296)
                     /gene="ffh"
                     /locus_tag="PXD18_002510"
     CDS             complement(905..2296)
                     /gene="ffh"
                     /locus_tag="PXD18_002510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HDL6302883.1"
                     /translation="MFENLSDRLSKTLRNITGKGRLTEDNIKDTLREVRMALLEADVA
                     LPVVRDFINKVKERALGVEVNKSLTPGQEFLKIVQSELETAMGEANEELNLAAQPPAV
                     ILMAGLQGAGKTTSVGKLAKFLKERHKKKVLVVSADVYRPAAIKQLQTLAEALKVDFF
                     PTETSQKPVAIAEAALKHAKLNFFDVLIVDTAGRLHVDGEMMEEIQQIHAVLNPIETL
                     FTVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRQITGKPIKFLGVG
                     EKTDALEPFHPDRVASRILGMGDVMSLIEDIQRSVDQEKAEKIAAKFKKGDEFTLEDF
                     REQLIEMKKMGGMMSMLDKLPGAKNLPDHVKSQVDDKMFMKMEAIINSMTLKERANPD
                     IIKGSRRRRIALGSGTQVQDVNKLLKQFDDMQRMMKKMRKGGMAKMMRGVKGMMGGGL
                     GGLGGLGSMFGKR"
BASE COUNT          790 a          552 c          510 g          773 t
ORIGIN      
        1 taaaaaatga tccccttaga gagacaacga gaaatactac gacttattaa taataatggt
       61 gtcgcaagta ttaattttct ggcagaacag ctaaaagtat cacatatgac aattcgccgt
      121 gatattcaaa agctggaaga gcaaggtaag gtatccctag tatctggtgg agttcaatct
      181 cttgaacgat taatcatgga attaccacac gatgataaat caatgttatt ccaagagcag
      241 aaatcagcta taggatcttt agcatcacag ctaattccct caaacacaac tatttatctt
      301 gatgctggaa ctactacatt agaaatagct catcggataa tcgatagaaa tgacttacta
      361 gttgtaacaa acgattttgt tattgctcac tatcttagta attcaggaaa atgtgattta
      421 attcatatag gaggaagtgt ctgtaaagaa aacctatcga caactggttc acttgcagca
      481 gaatttctga aaaacctatc aatcgatatg gcatttatat ctacttcatc ctggaattta
      541 aaaggtctaa caacgccgaa cgaaaataaa atccccgtta aaaaagcaat tttagaggca
      601 tccaagcaaa acattttagt gacagactct tcaaaatatg gaaaagtcgc aacttttttt
      661 gtttgccctc ttactgtatt tgaccagatt atttgtgata aaggattatt tgagaatgta
      721 cgagacgcac tgaaagggct aagtattaaa ttagatttag gataatcttc ttaccaattt
      781 tttctgagaa cgacaagcaa tcaaaaagta ttatttttgc aaataagata ttaataggga
      841 aagttaacaa tcctagcaac ggattgttaa ctgattttcg gctggtacta ataaaatagg
      901 aatattaacg tttaccaaac atactgccta agccaccgag accgcctaga ccaccaccca
      961 tcataccttt aacaccacgc atcatttttg ccattccgcc tttacgcatt tttttcatca
     1021 tacgttgcat atcatcaaac tgcttgagca gcttatttac atcttgcacc tgtgtgccgg
     1081 agccaagtgc gatacggcgg cggcgtgagc ctttaataat atccggattt gcccgctctt
     1141 ttaaggtcat agaattgatg atggcttcca ttttcatgaa cattttatca tcaacctgac
     1201 ttttaacgtg gtcaggcagg tttttcgccc ccggtagttt atcgagcatc gacatcattc
     1261 cacccatttt tttcatttcg ataagctgct cacggaaatc ttccaaggta aattcatcgc
     1321 cttttttgaa tttggcggca attttttccg ctttttcttg atcaaccgag cgttgaatat
     1381 cttcaattaa agacattaca tcgcccatac ctaaaatgcg ggaagccaca cggtcagggt
     1441 ggaacggctc aagggcatca gttttttcac ccacacctaa gaatttaatc ggtttaccgg
     1501 tgatttggcg aatagaaagt gccgcaccgc ctcgggcatc gccatcgact ttggtaagaa
     1561 taacaccggt aagcggcaac gcttcgttaa aggcttttgc ggtgttggcg gcgtcttgac
     1621 cggtcatcgc atcaaccgta aatagcgttt caatcggatt cagcacagcg tggatttgtt
     1681 ggatctcttc catcatttcg ccatcaacgt gtaaacgacc ggcagtatcc acaatcaata
     1741 catcaaagaa attaagctta gcgtgcttca atgccgcttc tgcaatcgct accggttttt
     1801 ggctggtttc ggtcgggaag aagtccactt ttaacgcttc agcaagggtc tgtagctgct
     1861 tgatagcggc agggcggtaa acatcggcag aaactaccaa cacctttttc ttgtggcgtt
     1921 ctttcaggaa ttttgccaat ttgccgacag aggtggtttt acccgcacct tgcaaacctg
     1981 ccattaaaat taccgcaggc ggttgggccg caagattcag ctcctcgttg gcttctccca
     2041 ttgccgtttc taattcgctt tgtacgattt ttaagaactc ttgccccggc gtgaggcttt
     2101 tgtttacctc aacccctaac gcacgctctt tgaccttgtt gatgaaatca cgcacaacag
     2161 ggagggcaac atccgcctcc aacaatgcca tacgaacttc acgcagggta tctttaatat
     2221 tatcttccgt taggcgacct ttgcccgtaa tgttacgcag cgttttagac agtctgtcag
     2281 agaggttttc aaacatatca gctttctcaa tttgcaaaat tttaggaaaa aagtaccgct
     2341 tgtgagcgga aagttgccgc cattatacaa aaaaaagcgt tacggttata gggaaataaa
     2401 aaaacggcat agcgattaaa ctatgccgta aaatttgacg atattcgagg aatcattatt
     2461 tagttatatt gtgcgatcat aatactccga attgcgtata aaagtgaagt gatattttca
     2521 aatttatgtt agaaatgaga ggtaaattac aaaattaaag gggatattat tgtttgaaaa
     2581 aataagagcg aaaagaaaac cctgatgatt gctcatcagg gcttc
//
LOCUS       DANLXD010000177         2586 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.178, whole genome shotgun sequence.
ACCESSION   DANLXD010000177 DANLXD010000000
VERSION     DANLXD010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2586)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2586)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2586
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.178"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..410)
                     /locus_tag="PXD18_002511"
     CDS             complement(<1..410)
                     /locus_tag="PXD18_002511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI domain-containing protein"
                     /protein_id="HDL6302884.1"
                     /translation="MRSMFKKFFGKNKSQSAVKSDTIFSIEQDNEGWLYPEKASQLLN
                     TELRQKYLGLLWQQVSMNRQMFEVLYQQPIERYAEMVQLLPASESHHHSHIGGMLDHG
                     LEVIAFSAKVRQSYILPPNVAPEEQSKQRDAWTAA"
     gene            complement(514..978)
                     /locus_tag="PXD18_002512"
     CDS             complement(514..978)
                     /locus_tag="PXD18_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArdC family protein"
                     /protein_id="HDL6302885.1"
                     /translation="MMNTQQPKFDLYQHITDRIIAALEQGTAPWLKPWSHPECNMALP
                     RNAVSNRLYSGINTLLLWIATAEHGYKQCKWITAKKANELGGYIRKGEKATVVMNYRP
                     NEREKLDEEGNIVYDEEGNPEMEQHFFIAKHNLFNLDQCENLPAELYDPVIP"
     gene            1187..1450
                     /locus_tag="PXD18_002513"
     CDS             1187..1450
                     /locus_tag="PXD18_002513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme-like superfamily protein"
                     /protein_id="HDL6302886.1"
                     /translation="MRPVTRNNRGTSFDPRHNKYINTLATALLARWHIEQFSERNIPV
                     NDENLYMAHNIGLDGFHRALLGQSTRKDIENMRKNGMKPWMSI"
     gene            complement(1534..2559)
                     /locus_tag="PXD18_002514"
     CDS             complement(1534..2559)
                     /locus_tag="PXD18_002514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
                     /protein_id="HDL6302887.1"
                     /translation="MTAGDTPHDTLKTLVGALKDTREEARKANERGDRFEQEVLRLQA
                     REAEVDSRIAGEVESRVESRLAAAWDGFNRQIEELKGRVQSGNQQQKEAEAIPVGGAS
                     SGFGTESAGQTGNVDNNGIRWVDPDDMVVTDEQGKPVTGNYSGKTKTGFPSPFKAEGE
                     SSNTGTALNNNAGTENMTGNTQIQQIKRTPYYTIPENSTLMGSTAMTALLGRVPIQGA
                     VTDPFPFKVLIGRENLIANGIDLPDVEGAIVSGTSTGDWTLSCVRSEVTSITFVFADG
                     RISNGRASGESRAVKRNQASNLTPFCLTVSLSGFNDIPHSDGNPGFLTMSAVDYVDVY
                     LMSHLAR"
BASE COUNT          711 a          585 c          498 g          792 t
ORIGIN      
        1 gcagcagtcc aagcatctcg ttgctttgat tgttcttcgg gagctacatt cgggggcaaa
       61 atatagcttt gacgaacttt agctgaaaaa gcaataactt ctaaaccgtg atcaagcatt
      121 ccaccgatat gtgaatgatg gtgtgattca gaagctggta atagttgaac catctcagcg
      181 taacgttcta ttggctgctg ataaagtacc tcaaacattt gacggttcat tgatacctgt
      241 tgccaaagta gcccaagata tttttgtcgt aattctgtat taagtaattg agaggctttt
      301 tccgggtata accacccttc attatcttgc tcaatagaaa aaatagtatc ggatttgacc
      361 gcactttgag atttattttt accaaaaaat tttttgaaca ttgaacgcat tggaagagac
      421 cgaaaatatg aatgctgtat tgaatgaaag ccgtttagcc ctttgccctt ttgggtaaga
      481 cctttcccct tggaaaggtt actcttatcc cccttagggg attacaggat cgtacagttc
      541 cgccggtaaa ttttcacact ggtctaaatt gaacagattg tgcttagcaa tgaaaaagtg
      601 ttgttccatt tccggatttc cttcctcgtc atacacaata tttccctcct catcgagttt
      661 ttctctctca ttaggacggt agttcatcac aacagtagct ttttcccctt tacggatata
      721 tccgccgagt tcattggctt ttttcgccgt aatccactta cactgtttgt agccgtgttc
      781 agcggtagca atccaaagca ataacgtatt gataccggaa tacagacggt tagaaaccgc
      841 attgcgaggt aatgccatat tgcattccgg atggctccac ggttttaacc acggagctgt
      901 accttgttcc aatgcagcaa tgattctatc agtaatatgt tggtataaat caaatttagg
      961 ttgttgagtg ttcatcatgt gtttctccaa agtttgggta aaaaaatggg gaaacacggt
     1021 taccctatgg ggaacttgtt tccccgatgg gtagtttata aaatttcaat ggccacaatt
     1081 tttctagaat catcaaagcc aacagaactg cctatggcgt agtaattacg aatagtctgt
     1141 tcatcggcat tgattagcag atacctatcg aggaagagag attgggatga gaccggtaac
     1201 gagaaataat cgtggaacca gttttgaccc tcgtcacaat aaatacatca atacattggc
     1261 aaccgcatta ttggcacgtt ggcatattga gcaattctct gagcgtaata tcccagtcaa
     1321 tgatgaaaat ctctatatgg ctcacaatat tggcttagat ggtttccatc gagcgttatt
     1381 agggcaatct actcgtaaag acattgagaa tatgcgtaag aatgggatga aaccttggat
     1441 gtccatttag ctctgttttc aaatgaccta atccagtttg ttccggagag agtaccgaaa
     1501 ttttgcactc tttcatccgt ggtgtatcaa acttcaacgt gctaaatgag acattaaata
     1561 tacatcaaca taatctaccg cactcatcgt taagaaaccg ggattcccat cagaatgagg
     1621 aatatcgtta aagcccgata aggagacggt taaacaaaat ggtgttaaat tacttgcttg
     1681 atttcgtttc acagctctgc tttctccact cgctcgccca ttcgaaatac gaccgtctgc
     1741 aaacacaaag gtaatgctcg ttacctcaga acgaacgcaa gatagcgtcc aatctccggt
     1801 tgatgtaccg gatacaatcg ccccctcaac atcaggtaaa tcaatgccat tggcaattaa
     1861 attttctcgc ccgattaata ctttaaacgg aaacggatct gtcacagcac cttgaatagg
     1921 tacacggcct aacaatgccg tcatcgcagt agaacccatt aaagtcgaat tttcgggaat
     1981 agtgtaataa ggtgtacgct ttatttgctg tatctgagta ttaccagtca tattttctgt
     2041 cccagcatta ttatttaatg ctgtcccagt atttgaactt tccccctctg ctttaaaagg
     2101 gcttggaaag ccggtttttg ttttcccgga ataattgcct gtaaccggtt taccttgttc
     2161 atcggttacc accatatcat caggatcgac ccagcgaatg ccattgttat ctacattccc
     2221 tgtttgtcct gctgattcag tcccaaagcc agaagaagcc cctcctacag ggattgcctc
     2281 tgcttctttc tgctgctgat taccactttg aacccgacct ttcagttctt cgatttggcg
     2341 attaaatcca tcccaagcag cagccaaacg gctttctaca cgactttcta cttcacccgc
     2401 aatacgagaa tccacttcgg cttctcttgc ttgtaagcgt aatacctctt gctcaaagcg
     2461 atcaccacgc tcatttgctt tacgagcttc ttcacgagta tcttttaatg ctcctaccaa
     2521 cgtttttaat gtatcgtgag gcgtatctcc tgcagtaata cctaatgtat tcgcctcctc
     2581 atcact
//
LOCUS       DANLXD010000178         2577 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.179, whole genome shotgun sequence.
ACCESSION   DANLXD010000178 DANLXD010000000
VERSION     DANLXD010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2577)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2577)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.179"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            32..751
                     /locus_tag="PXD18_002515"
                     /pseudo
     CDS             32..751
                     /locus_tag="PXD18_002515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616566.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
     gene            811..1260
                     /locus_tag="PXD18_002516"
     CDS             811..1260
                     /locus_tag="PXD18_002516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudoazurin"
                     /protein_id="HDL6302888.1"
                     /translation="MLAKLKWNQLACVTLAFCSASVFSAHHEIKMLDNNAEGSMVFEP
                     GYVKAEVGDTVTFIPSHKGHWVESRSIPEGAEKFLSKEDEEFTITLTHEGVYVYYCPP
                     HRTMNMAGIIQVGQALNLEATQKEVEKIEKRTKENKGRLFEYLEQVK"
     gene            1361..1882
                     /locus_tag="PXD18_002517"
     CDS             1361..1882
                     /locus_tag="PXD18_002517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Type II secretory pathway, pseudopilin PulG"
                     /protein_id="HDL6302889.1"
                     /translation="MYKAITLIEILTTITIMVIAVYFISPVIFTLQDRIALHSEIENI
                     QSFIQQIQTKARYTKRNYTLTLSQRNNQWCMIAVIKPINTSKQIICDCLNKHFCDLGK
                     EYHLYTPTHQQIVLKNKSLYPKSFINVDGVSGQLESKCIKLSLNKENEILQFEQLGRV
                     YVAAKNKRSTCKD"
     gene            1914..2540
                     /locus_tag="PXD18_002518"
     CDS             1914..2540
                     /locus_tag="PXD18_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302890.1"
                     /translation="MASALGAFLLLLVASSYADFYYTQTKQKEQLYLQAEAHQLLNYF
                     QQHFQHIGYQGSHRTDSNFDLFQQAGKSLNIVHKNCIIGFYDLNQDGCLGKRKTKTAA
                     CKLGTVNNTREVLKEIVGFKVENNEIYTFSSQLDNCVKEQCQTLLENCDGNWSKFTEA
                     NNFKTKKLDFSWRQEDNLLKIELEIESPKQKGLIYTAVRYVFILNNTR"
BASE COUNT          897 a          414 c          509 g          757 t
ORIGIN      
        1 gttttagtcg ttatctagga cagcccctac ttttaatact cgtaagcccc cttttgataa
       61 ccctaaagtt cgtcaagcat tgaattatgc ggtgaataaa actgaaattt taacttccgt
      121 ttaccaaggc tctgcaacgc cagctaaaaa cccaatgcct tctacgattt ggggatataa
      181 caacgaagta gccggttatg aatttaatcc ggaaaaggcg aagagcttgc ttaaagaggc
      241 cggattagaa aatggctttg aaacagaaat ttgggcaatg cctgtttctc gcccttacaa
      301 tccaaatgcc cgtagaatgg ctgaaatgat tcaagaggat tggaaagcaa taggggtaga
      361 ggcaaagata gtgagctatg aatggggaga atatcttaaa cgaatgggaa acggcgagca
      421 cgctaccgga atgattggtt ggaccggaga taacggcgat ccagataatt tcctcaatgc
      481 cctactcagt tgtaatgcgg tagaacaagg ctcaaactat gcagggtttt gtaatccaga
      541 gtttgaccgt ttaattaatg aggctgcgac tatcagtgat caaaacaagc ggtcagattt
      601 atataaaaaa gcgcaattca tctttaatga gcaagcacct tggttaccga ttgcacattc
      661 aacggtgtat tttccggtaa ggaaagaggt aaaaggctat gttgtcagcc cgtttattgc
      721 tcataatttt tatggtgttg agctggaata acctaaggta taatgaattg aactcatttt
      781 gtgcctcata aatttaggag caataaatat atgttagcga aacttaagtg gaatcaatta
      841 gcttgtgtaa cattggcatt ttgttcagcc tcagtatttt cagcccatca cgaaatcaaa
      901 atgttagata acaatgcgga aggatcaatg gtatttgagc ccggttatgt aaaagcagag
      961 gtgggcgata cggtaacatt tattccgtct cataaagggc attgggttga aagccgctcg
     1021 attccggaag gtgcggagaa gttcttatct aaagaagatg aggaatttac tattaccctt
     1081 actcacgaag gtgtttatgt ttactactgt ccgccacacc gaaccatgaa tatggccgga
     1141 attatccaag taggacaagc tctcaatctt gaagccacac aaaaagaagt ggaaaaaatt
     1201 gaaaaacgca cgaaagaaaa taaaggacgt ttatttgaat atttagagca agttaagtag
     1261 aagtgattta attttgcgat ctgcatcgaa aaatcaatat ttaatagttt acaaatgatg
     1321 cttaaattct aagataccct ctatcaatga gggtattttt atgtataaag ccatcacatt
     1381 aattgaaata ctaaccacta tcactattat ggtgatcgct gtttatttta tctcgccggt
     1441 tatttttaca ctgcaagatc gaattgcact tcatagtgaa attgaaaata tccaatcttt
     1501 tattcagcaa atccaaacta aagcacgtta taccaaacgt aattatacct taaccctttc
     1561 tcagcggaat aatcagtggt gtatgattgc ggtaattaag ccaatcaata ctagcaaaca
     1621 aattatttgt gattgtttga ataaacattt ttgtgattta ggaaaagaat atcatcttta
     1681 tacgccgact catcagcaga ttgtattaaa aaataaaagt ttatatccga aatcctttat
     1741 taatgttgat ggggtaagtg gtcaattaga atcaaaatgt attaagctca gtttaaataa
     1801 agaaaatgaa attttgcaat ttgaacaatt aggacgggtt tatgtggcag caaaaaataa
     1861 acgtagcacc tgcaaagatt agtttatctg cttttagcct aattgaagta ttaatggcta
     1921 gtgcattagg ggcgttttta ttattgcttg ttgcttcaag ttatgccgat ttctattaca
     1981 cacaaaccaa acaaaaagaa cagctctact tgcaagcaga agctcaccag ttactaaact
     2041 acttccaaca gcattttcaa cacattggct atcaaggctc tcacagaaca gacagtaatt
     2101 ttgatttatt tcagcaagca gggaaaagcc tgaatattgt gcataaaaat tgcattattg
     2161 gattttacga tttaaaccaa gatggctgtt tgggaaaacg taagacaaaa acggccgctt
     2221 gtaagttagg aacagtgaat aataccagag aggtgttaaa agaaattgtt ggctttaaag
     2281 tagaaaataa tgaaatttat actttttcat cgcaattaga taattgtgtg aaagaacaat
     2341 gccaaacatt attggaaaat tgcgatggaa attggagtaa atttaccgaa gcaaataatt
     2401 tcaaaactaa gaaactggat tttagttgga gacaggaaga taacttatta aaaattgagt
     2461 tagaaataga atcacctaaa caaaaaggat tgatttatac ggcagtacgt tatgttttta
     2521 tcttaaataa tacgaggtaa aagtgaataa atataaaaat gccagtgcat tattggt
//
LOCUS       DANLXD010000179         2562 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.180, whole genome shotgun sequence.
ACCESSION   DANLXD010000179 DANLXD010000000
VERSION     DANLXD010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2562)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2562)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2562
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.180"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..1170
                     /locus_tag="PXD18_002519"
     CDS             <1..1170
                     /locus_tag="PXD18_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HDL6302891.1"
                     /translation="DRNLSVETPNGFDVILEDKKTGNLSGVNQSNIKALQFFIYQSQQ
                     TEEPLQRRFENSEIYGPFVVKSENHTYNQYFIKAVDAQKEWINTILDSPFIMAVLLMF
                     AGIPLLIWLSFKITKPVKELTISANAVASGNLETNPKLEAEWIYEIGEVGKSFNHMVI
                     SLKNLTQQQQRMISDISHELKTPLARLQLAIAILRRKTCGLAEIDRIEAEVGKLDQLI
                     KDLLTISREQLNYQIHKKIFVIDEIWNNVIEDAKFETSQNNIIFIIKQNIKNPESYSI
                     NGAVGLLASALENLIRNGQKYAKKMLSVSMNVEDGHLFLTVEDDGEGVPENEYENILK
                     PFYRVDEARARETGGAGLGLAIVQNVVKQHQGTIHLDKSNMGGLKIELKLPLWRS"
     gene            1220..>2562
                     /locus_tag="PXD18_002520"
     CDS             1220..>2562
                     /locus_tag="PXD18_002520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL6302892.1"
                     /translation="MKLIEIENLNKYFGLGQTRAHILKNINLSIERGDFVAIIGASGS
                     GKSTLMNIIGCLDTASSGICRIDGKETQTMSADELSDLRQRKLGFIFQRYNLLSALNA
                     NENVALPAIYAGMDSSSRKKRADTLLTKLGLSDKTQHKPNELSGGQQQRVSIARALMN
                     GGEIILADEPTGALDSKSGETVLEILRDLHYEGHTIIMVTHDPNIAAQASRIVEIKDG
                     QIIRDERQRTDVQETALNKTTTQKPRFWNQLFESFKMATSAIMAHKMRAILTMLGIII
                     GITSVISVVALGRGSQQQILSNINNLGTNTMDIMNGTGFGDRRANLTKNLTISDALML
                     SRQNYVESTTPSSNVSATLIYGNTAVTGSVRGVGEQFIDVKGLKLISGRFFSAEEVKN
                     VAQVIVIDPNTQKDLGLTEPVEGKTILVDKKPLQIIGVAQQSNNMNQSSLTLWAP"
BASE COUNT          888 a          458 c          512 g          704 t
ORIGIN      
        1 gatagaaatt tatcagttga aacacctaat ggatttgatg taatcctaga agataaaaaa
       61 actggtaatt taagtggcgt aaaccaaagt aatattaaag cattgcagtt ttttatttat
      121 caatcacaac agactgaaga gccgttacaa agacggtttg aaaatagtga aatctatggt
      181 ccatttgtcg tgaaatccga aaaccatact tataaccaat attttattaa agcggtagat
      241 gctcaaaaag agtggattaa tacgatttta gactcacctt ttattatggc agtattactt
      301 atgtttgccg gaattccttt attaatatgg ttatccttta aaattaccaa accggttaaa
      361 gaattaacta tctcggcaaa tgcggtagcc tctggtaatt tggaaactaa tcctaaatta
      421 gaagcagaat ggatctatga aattggggaa gttggaaaaa gctttaatca tatggtgata
      481 agcttaaaaa acttaactca gcagcaacaa agaatgattt cggatatatc tcatgagtta
      541 aaaacacctt tagccagatt acaactcgct attgctatat tacgccgtaa aacctgtggt
      601 ctggcagaaa tcgatcgcat tgaagcagaa gtaggtaaat tagaccaatt gattaaagac
      661 ttgttaacaa tatcacgtga acaattaaat tatcaaattc ataaaaaaat ttttgtaatt
      721 gatgaaattt ggaataatgt aattgaagat gctaaatttg aaacctcaca aaataatatt
      781 atttttatca tcaagcaaaa catcaaaaac cccgaatctt attctattaa cggggccgta
      841 ggtttactgg ctagtgcttt agaaaatttg atccgaaacg gccaaaaata tgcaaaaaaa
      901 atgctgtcgg tctcaatgaa tgtagaagat ggtcatttat ttctcacagt tgaagatgat
      961 ggcgaggggg ttcctgaaaa cgaatatgaa aatattctta aaccttttta ccgcgtagat
     1021 gaagcaaggg caagagaaac aggaggagcc gggctaggat tagcgattgt gcaaaatgta
     1081 gttaaacagc accaaggtac tattcattta gataaaagta atatgggagg attaaaaatc
     1141 gaactgaaac ttcccctttg gcgttcctaa ggcaaaaagc atatcgtttg taaaaaacag
     1201 tcgaaaaata accgcttgta tgaaattaat tgaaatagaa aatctcaata aatactttgg
     1261 cttggggcaa acccgagccc atattctaaa aaatatcaat ctcagtattg aacggggtga
     1321 ttttgtcgca attataggtg cttcaggttc tggcaaatct accttaatga acattattgg
     1381 ctgtttagat actgccagct caggtatttg ccgtattgat ggcaaagaga cccaaacaat
     1441 gtctgcagat gaactgtctg atttacgcca acgtaaactg gggtttattt tccaacgcta
     1501 taatctcctt tcagctttga atgcaaacga aaatgttgcc ctacctgcaa tttacgccgg
     1561 aatggatagc tcatcacgca aaaaacgagc tgatacgtta ttaacgaagt taggattatc
     1621 agataaaacc caacataagc cgaatgagtt atctgggggg caacagcaac gagtcagcat
     1681 tgcacgagcc ttaatgaacg gcggtgaaat cattcttgca gacgagccta ccggtgcatt
     1741 agattctaaa agtggcgaaa ctgtattgga aatcttgcga gatctacact acgaaggtca
     1801 taccattatt atggtaacac acgacccaaa cattgccgct caagccagcc gtatcgttga
     1861 aattaaagat gggcaaatca ttcgagatga acgccaacgt actgatgttc aagaaacggc
     1921 tctcaataaa acgacaacac aaaaacctcg cttttggaat caactgtttg aatccttcaa
     1981 aatggcaacc agtgcaatta tggcgcataa aatgcgggca atcctcacga tgctgggcat
     2041 tattattggc attacctctg tgatttccgt agtcgctctc ggtcgaggct cgcaacaaca
     2101 aatcctttct aatatcaaca acctaggcac aaatacgatg gatattatga atggaaccgg
     2161 ctttggcgat agaagagcca atctgactaa gaatttaacc atcagtgatg ccttaatgtt
     2221 gagtcggcaa aactatgtgg aaagcactac tccttcaagc aatgtcagtg ccacattgat
     2281 ttatggtaat accgcagtaa ccggttcagt acgaggtgtt ggagagcaat ttattgatgt
     2341 gaaaggatta aagctgattt cagggcgctt tttcagtgcc gaggaagtaa aaaatgtagc
     2401 gcaggttatt gtaattgacc ctaacactca aaaagatttg gggctaacag agcctgttga
     2461 aggtaaaacg attttagtgg ataaaaaacc gttacaaatc attggtgtgg cgcaacagtc
     2521 aaacaatatg aaccaaagta gccttacctt atgggcgcct ta
//
LOCUS       DANLXD010000180         2536 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.181, whole genome shotgun sequence.
ACCESSION   DANLXD010000180 DANLXD010000000
VERSION     DANLXD010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2536)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2536)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2536
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.181"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            42..1109
                     /gene="wecB"
                     /locus_tag="PXD18_002521"
     CDS             42..1109
                     /gene="wecB"
                     /locus_tag="PXD18_002521"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HDL6302893.1"
                     /translation="MAPLVKGLKQSNLDFKVCVTAQHRQMLDQVLELFEITPDYDLDI
                     MSSKQTLSTVTSAILEKIQPVIDEYKPTTIFVHGDTATTLATSLAAYYNQIDIAHIEA
                     GLRTHNIYSPWPEEGNRKLTGALAKYHFAPTQSTKKNLLNENITEDTIYVTGNTVIDA
                     LFLACKKLDENVDLLSSLQEKFSYIKSKRTILITGHRRENFGNGFENICKAVSTLASD
                     FPDVQFIYPVHLNPNVREPVNRLLADKSNVHLIEPCDYLSFVYLMRESYLILTDSGGI
                     QEEAPSLGKPVLVMRDTTERPEAVEAGTVKLVGTAQSEIIKQVTELLNDQAAYTKMSE
                     AHNPYGDGTAVKQILSVFQSK"
     gene            1124..2386
                     /gene="wecC"
                     /locus_tag="PXD18_002522"
     CDS             1124..2386
                     /gene="wecC"
                     /locus_tag="PXD18_002522"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HDL6302894.1"
                     /translation="MSNFNTISVVGLGYIGLPTAAVFAQHGLNVIGVDVNQLAVDTIN
                     QGKIHIVEPDLDVAIHQCVSSGKLKATLTPEPAEAFLIAVPTPFKGEDYEPDLSYIQA
                     ACKAIAPVLEKDNLVILESTSPVGATEQMAEWLAEYRSDLSFPQQAGEDSDIRIAHCP
                     ERVLPGQVMRELIENDRIIGGMTNKCSKQAVDLYKTFVKGDCIVTNARTAEMCKLTEN
                     SFRDVNIAFANELSIICDRLDINVWELIALANRHPRVNILQPGCGVGGHCIAVDPWFI
                     VNKTPDLAKIIRTAREVNDYKPEWVISKVNEAVIKALQKTGKSIDQIKIACLGLAFKP
                     DIDDLRESPALKITEKLADKYVGQVLAVEPNVEELPKKLAEKNIQLIPLDEALDNVDV
                     IVLLVDHRDFKVVKSNAVVVDTKGIWGN"
BASE COUNT          828 a          481 c          510 g          717 t
ORIGIN      
        1 gttatctaat tgtattcggc acccgcccag aagccattaa aatggcacct ttggttaagg
       61 gtttgaagca aagcaatttg gattttaaag tctgtgttac cgctcagcac cgccaaatgc
      121 tagaccaagt cttagagttg tttgaaatta ctccagatta tgacttggat attatgagta
      181 gcaaacagac gctttcgacc gtaacttctg ccattttaga aaaaatccaa cctgttattg
      241 atgaatacaa accaaccacc atttttgtgc acggcgatac tgcaacaacc cttgccactt
      301 cactggctgc atactacaac caaattgata tcgctcatat tgaggcgggt ttaagaacgc
      361 ataatatcta ctccccttgg ccagaagaag gtaatcgcaa gctaacaggg gctttggcaa
      421 aataccattt tgcaccaaca caaagcacca agaaaaatct actcaacgaa aatattactg
      481 aggacaccat ttatgtaacg ggtaatactg taattgatgc cttattcctc gcttgtaaaa
      541 aattagatga aaatgttgat ttattaagtt cactccaaga gaaattttct tacataaaaa
      601 gtaagcgtac tattttgatt actggacatc gccgcgaaaa ttttggtaat ggttttgaga
      661 acatctgtaa agccgtttca acattagcgt ctgatttccc tgacgttcaa tttatctacc
      721 ctgtgcatct caacccaaat gtaagagaac cggtaaatcg cctattagcg gataaatcca
      781 atgtgcatct cattgagcct tgcgactatc tctcctttgt ttatttaatg agagagtctt
      841 accttatctt aactgactcc ggaggtattc aagaagaagc cccatcatta ggaaaaccgg
      901 tattagtaat gagagacaca acagaaagac cggaagctgt agaagccgga acagtaaaac
      961 ttgttggaac tgcacaatct gaaattatta aacaagttac tgagttactc aatgatcaag
     1021 ctgcttatac aaaaatgtct gaggctcaca acccttatgg cgatggcaca gctgtgaaac
     1081 aaattctctc agtatttcaa tcaaaataat aaggaataaa tgtatgtcga actttaatac
     1141 catttcagta gtaggcttag gctatattgg cttgccaacc gccgctgtat ttgcccaaca
     1201 cggtctaaat gtaattggcg tagatgttaa tcagctcgcc gtagacacta tcaatcaagg
     1261 gaaaattcac attgtcgagc ctgatttaga tgttgctatt caccaatgtg tatctagcgg
     1321 aaaattaaaa gccacactga cacctgaacc agcagaagca tttttaattg ctgtaccaac
     1381 gccttttaaa ggcgaggatt atgagcctga tttaagttat attcaagctg cttgtaaagc
     1441 tattgcacct gtgctggaaa aagataattt agtcatttta gaatccacct ctccggttgg
     1501 cgcaacagaa cagatggctg agtggcttgc cgagtaccgc tcagacctaa gtttcccaca
     1561 gcaagcaggt gaagattccg atattcgtat cgcccattgc ccagaacgag tgctaccagg
     1621 gcaagtgatg cgtgaattga ttgaaaatga ccgtattatc ggtggaatga caaataaatg
     1681 ctctaaacaa gcggtcgatt tatacaaaac ttttgtaaaa ggcgattgta tagttaccaa
     1741 tgctcgtacc gcagaaatgt gcaaattgac cgaaaatagt ttccgtgatg tcaatattgc
     1801 ttttgcaaat gagctttcta ttatttgtga tcgcctagat attaatgtat gggaactaat
     1861 tgctttggct aacagacacc cacgagtcaa tatcttacaa ccgggttgtg gtgtgggtgg
     1921 acactgcatt gctgtagatc cttggtttat tgtgaataaa actcctgact tggcaaaaat
     1981 tattcgtact gctcgtgaag taaatgacta taaacctgaa tgggttattt caaaagtaaa
     2041 tgaagcggtg attaaagccc tacaaaaaac aggtaaatct atcgaccaaa tcaaaatcgc
     2101 ctgcttgggc ttggcattta aacctgatat tgatgattta cgtgaaagcc cagccttaaa
     2161 aattactgaa aaattagcgg ataaatacgt aggccaggtc ttggctgttg agccaaatgt
     2221 tgaagagcta ccgaaaaaat tggctgagaa aaatatccaa cttattccac ttgatgaggc
     2281 attagataac gttgatgtga ttgtgttgtt agtggatcat agagacttta aggtagttaa
     2341 atcaaatgct gtagttgttg atacaaaagg gatttggggt aattaaattt agaggttgat
     2401 ggctatgaat gatatgacag attatcaaaa agaaataaat gaacttaagc aacgcttgaa
     2461 gcagcaatat gcagagttag taattgctca agaaaagaga gctgggcatt acaaaaaatt
     2521 gcaatatcaa atcgaa
//
LOCUS       DANLXD010000181         2505 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.182, whole genome shotgun sequence.
ACCESSION   DANLXD010000181 DANLXD010000000
VERSION     DANLXD010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.182"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(105..389)
                     /gene="raiA"
                     /locus_tag="PXD18_002523"
     CDS             complement(105..389)
                     /gene="raiA"
                     /locus_tag="PXD18_002523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005823326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HDL6302895.1"
                     /translation="MSLNISSKQMDITPAIRTHIEERLAKLEKYHTQLINPHFMLIKQ
                     PNSFQVEATIGTPLGDLVAKAEHEDLYTAIFDVKKKLEGQLIKLKEKNEH"
     gene            569..1510
                     /locus_tag="PXD18_002524"
     CDS             569..1510
                     /locus_tag="PXD18_002524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxL/LpxP family Kdo(2)-lipid IV(A)
                     lauroyl/palmitoleoyl acyltransferasee"
                     /protein_id="HDL6302896.1"
                     /translation="MSEKKQLPPFQTQFLHPKYWGLWLGLGVFKLILCLPYPILVKIG
                     LGLGKLFTKLGFGKRRMRIARRNLELCFPHYSAEKVEELVEENMKSVGMAIIETGMAW
                     FWSDKRILKWSKIEGLEHLTQRDQERGILLVGVHFLTLELGARIIGLHHQGVGVYRPN
                     DNPLLDWIQFRGRVRSNKAMLDRKDVRGMIRALKNGEMIWYAPDHDYGRRNSVFVPFF
                     AVEETCTTAGSYMLLRSAPKSLVIPFSPIRNLDYSGYTVKVSPAVDFSQCQNEVETAI
                     LMNRVVEREIMAALTQYMWLHRRFKTRPNEGDQSLYD"
     gene            1606..2493
                     /gene="dapA"
                     /locus_tag="PXD18_002525"
     CDS             1606..2493
                     /gene="dapA"
                     /locus_tag="PXD18_002525"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HDL6302897.1"
                     /translation="MATPLFHGSIVALVTPMTHGEVDYQDLKKLVEYHIQAGSHAIVS
                     VGTTGESTTLSIDENVKVIKKTVEFADGRIPIIAGTGSNATSEAITMTKLLANSGVAG
                     CLSVVPYYNKPTQEGMYLHYKAIAESTDLPQILYNVPGRTGSDLKPETIGRLAKIENI
                     VAVKEATGDLSRLPLIKQLAGEDFIFLSGDDATGFESMKLGGQGVISVTNNVAAADMA
                     KMCELALAGQFTEAEEINNRLMALHHDLFVESNPIPVKWAAYKLGLISEPNLRLPLTT
                     LSESAQPVVLKALQQAGLI"
BASE COUNT          768 a          391 c          525 g          821 t
ORIGIN      
        1 tttgcgaaaa atacggtaaa ttttaccgct tactcttgga ataaaaaata gggctaaatg
       61 atatctctca tttagccctt attattagat gtaaagttta aacatcaatg ttcatttttc
      121 tcttttagtt taattaactg accttctaat ttcttcttaa catcaaaaat tgcagtatat
      181 aaatcttcat gttcagcttt agcgactaaa tcacctaaag gggtgccaat tgttgcttca
      241 acttggaatg agttaggttg ttttatcagc ataaaatgtg ggtttatcaa ttgggtgtgg
      301 tatttttcta acttagctaa acgctcctca atatgagtac ggattgcagg ggtaatgtcc
      361 atttgtttgc ttgaaatatt taatgacata acattttcct cttgtttagt taaggctttt
      421 gccgttgata ttctaataac caaaatatgc tcatcactcc aaaaattcaa gtgaaaaatg
      481 aaataagttt ccaaaaattt gatctactta acacttttag cagtttttag ctataatgta
      541 atcataatct agtatgtgag aataattaat gagtgagaaa aaacagttac ctccattcca
      601 gacacaattt ttacacccta aatattgggg attgtggctc ggtttaggtg tttttaagtt
      661 aattttatgt ttgccttatc ctattttagt aaaaattggt ctgggactag gtaaattgtt
      721 tactaaattg ggttttggta aacgtcgtat gcgtattgct cgccgtaatt tagagctctg
      781 ttttccccat tactctgctg agaaagtaga ggaattagtc gaagaaaata tgaaatcggt
      841 tggaatggcg attattgaaa ctggtatggc ttggttttgg tcggataaac gtattcttaa
      901 atggtctaaa atcgaagggc tagagcattt aacacagcgt gatcaggaaa ggggtatttt
      961 acttgtaggg gtgcattttc tgactttaga actcggtgca agaattattg ggctacatca
     1021 tcaaggagta ggggtttatc gaccgaatga taatccatta ttagattgga tacagtttcg
     1081 aggacgtgtt cgctcaaata aagcgatgtt agatcgtaaa gatgtgcgtg gaatgattcg
     1141 agctttaaaa aatggcgaga tgatatggta cgcgcctgat cacgattatg gaagacgaaa
     1201 tagcgttttt gtaccatttt ttgcagtgga ggaaacttgt actactgcgg gtagttatat
     1261 gttacttcgt tctgccccaa agagtttagt gatcccgttt agcccgattc gaaatttgga
     1321 ctattcaggc tacacagtaa aagtcagtcc tgccgttgat tttagtcaat gtcaaaatga
     1381 agttgaaacg gctattttaa tgaatcgggt ggtagaacgt gaaattatgg ctgcgctaac
     1441 tcaatatatg tggctacatc gccgttttaa aactcgccca aatgaaggtg atcaaagcct
     1501 atatgattaa ttttaaataa tttcaaaaaa gtgcttgcat atttaagctg aattttgcaa
     1561 tctagcaatg ttatcaagca taataaaaaa atacaggaga tgattatggc gaccccttta
     1621 tttcacggta gtatcgtagc attagttaca ccaatgactc atggtgaggt agattatcag
     1681 gatttaaaaa aattagttga gtatcatatt caagcaggtt ctcacgctat tgtatctgtt
     1741 ggtacaacag gtgaatctac cacattaagc attgatgaaa atgttaaggt gattaagaaa
     1801 acggttgaat ttgctgatgg acgtattcca attattgcag gaactggttc taatgcgacc
     1861 agtgaagcta tcactatgac taaattatta gcaaacagtg gtgtagctgg ttgtttaagt
     1921 gtagtgcctt attacaacaa gccaacgcaa gaggggatgt acttacacta caaagcgatt
     1981 gcagaaagta cagatttacc acaaattctg tataatgtgc cggggcgaac agggagtgat
     2041 ttaaaacctg aaacaatcgg tcgcttagcg aaaattgaga atattgttgc tgtgaaagaa
     2101 gcaacgggtg atttaagccg cttaccttta attaagcaat tagccggtga agattttatt
     2161 ttcttaagtg gtgatgatgc taccggtttt gagtctatga aattaggtgg tcaaggggtg
     2221 atctcggtca ccaataatgt tgctgctgct gatatggcaa aaatgtgtga gttagctctt
     2281 gccggtcaat ttactgaagc agaagaaatt aataaccgct taatggcgtt acaccatgac
     2341 ttatttgtcg aatctaaccc gattccggtg aaatgggctg cttataaatt aggtttaatt
     2401 agtgagccta atttacgttt accgcttacc acactgtctg aatcagcaca gcctgtagtg
     2461 ttaaaagcat tacaacaagc gggcttaatt tagttatttt ttgca
//
LOCUS       DANLXD010000182         2446 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.183, whole genome shotgun sequence.
ACCESSION   DANLXD010000182 DANLXD010000000
VERSION     DANLXD010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.183"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            126..2402
                     /gene="gshAB"
                     /locus_tag="PXD18_002526"
     CDS             126..2402
                     /gene="gshAB"
                     /locus_tag="PXD18_002526"
                     /EC_number="6.3.2.2"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate--cysteine ligase
                     GshA/glutathione synthetase GshB"
                     /protein_id="HDL6302898.1"
                     /translation="MKLQKLIRENHLALLFQQGNFGLEKESQRVDRNGNIVTTPHPAV
                     FGNRSYHPYIQTDFAESQLELITPPNAKLEDSFRWLSAIHEVVLRSLPEEEYIFPLSM
                     PAGLPPEEQIQEAQFDNPEDVQYRQHLSKNYGKYKQMVSGVHYNFQLSTEFVEKAFAL
                     QTEYSELKAFQNALYMKLANNFLRYQWILLYLLAATPTVESQYFYEKSPLARGQLVRS
                     LRSSPYGYVNSEKVVVNHDSLESYVESLEANVANGLLIAEKEFYSNVRLRGGKKAREL
                     LENGVKYAEFRLFDLNPFAPYGIELNDAKFIHYFLLGMLWLEETSGQKEVEIGKQKLY
                     QVALEDPRTETAFRAEGEAILNQLLAMLEELSAGQESLDLVREKLAQFADPSKTLNGR
                     LIAAIEEVGSYKALGAKLAQTYKAQAFERFYALSAFDNMELSTQALFFDLIQQGIEVE
                     VLDENDQFLALKFGDHLEYVKNGNMTSRDQYISPLIMENKVVTKKVLAKAGFNVPKSV
                     EFTNLEQAVAHYPLFEGKAVVIKPKSTNYGLGITIFQQAVKNREDFAKAVEIAFREDK
                     EVMVEDYLVGTEYRFFVLGDETLAVLLRVPANVVGDGIHSVKELVERKNDDPLRGDGS
                     RSPLKKIALGEIEQLQLKEQGLTVDSVPAKGQTVQLRANSNISTGGDSIDMTDQMHES
                     YRQIAVGIAQAMGAKVCGVDLIIPDLTKPAEPNLSSWGVIEANFNPMMMMHIFPYQGK
                     SRRLTKAVIKMLFPEIGN"
BASE COUNT          742 a          502 c          544 g          658 t
ORIGIN      
        1 gaagcagtat ttctgttata accaaatcat ctacttcatt ccaataaact aaaacccact
       61 atttcactaa gtctttcatt tgtgttattg tgccgataca tttttttgac tacaaaggat
      121 agatgatgaa actacaaaaa cttatccgag aaaatcattt agcattgctg tttcaacaag
      181 ggaattttgg gcttgagaaa gagagccaac gggttgatcg caacggcaat atcgttacta
      241 ctccccaccc tgccgtattc ggtaatcgct cttaccaccc ttatattcaa accgattttg
      301 ccgaaagtca gctagagtta atcactcccc cgaatgctaa attagaagac agttttcgtt
      361 ggctctctgc tattcacgaa gtggtattgc gttcgttgcc agaggaggaa tatatcttcc
      421 ctctcagtat gccggcaggc ttgccgccgg aagagcaaat tcaagaagca caatttgaca
      481 accctgaaga tgtgcaatat cgccaacacc tttccaaaaa ctatgggaaa tataagcaaa
      541 tggtaagcgg cgtgcattat aattttcaac tttcaacgga atttgtcgaa aaagcctttg
      601 ctttacaaac ggaatatagc gagctgaaag ccttccaaaa cgcactttat atgaagttag
      661 ctaataactt tttgcgttat caatggattt tgctctattt attggctgcc acgcctacgg
      721 tggaatcgca atatttttat gaaaaatcac cgcttgcgag agggcaactt gtccgcagct
      781 tgcgttcaag cccttatggt tatgtgaatt cggaaaaagt ggtggttaat cacgacagct
      841 tagaaagcta tgttgaaagc cttgaagcca atgttgccaa cggattatta attgccgaaa
      901 aagaattcta ttccaatgtg cgtttacgag ggggcaaaaa agcccgtgag ctattggaaa
      961 acggtgtgaa atacgccgaa ttccgtttat ttgatttaaa ccctttcgcc ccttacggca
     1021 ttgagctgaa tgatgccaaa tttatccatt atttcttact cggtatgctt tggctggagg
     1081 aaacaagcgg tcaaaaagag gtcgaaatcg gcaaacagaa actttaccaa gtcgcacttg
     1141 aagatccaag aacagaaacc gctttccgtg ccgaaggtga agccatttta aatcaacttt
     1201 tagcgatgct tgaagaatta tctgccggtc aggaaagcct agatttggtg cgggaaaaat
     1261 tagctcaatt tgctgatcca agcaaaaccc tgaacggacg tttaattgcc gcaatagagg
     1321 aagtcggcag ttataaagca ttgggggcta aattggctca aacctataag gcacaagcct
     1381 ttgagcgttt ttatgcgtta tcggcatttg ataatatgga actttccact caagccctgt
     1441 tttttgattt gatccaacaa gggattgagg tggaagtact ggacgaaaac gatcaattcc
     1501 tcgccctaaa atttggcgat catttggaat atgtgaaaaa cggcaatatg accagccgag
     1561 atcaatacat ttcaccgctg attatggaaa acaaagtggt gacgaaaaaa gtattggcaa
     1621 aagccggctt taacgtgccg aaaagcgttg aatttaccaa ccttgaacag gctgtggcac
     1681 attatccgct atttgaaggc aaagcggtgg tgattaagcc gaaatcgact aactatggtt
     1741 tagggattac catcttccaa caagcggtca aaaatcgaga agattttgca aaagcggttg
     1801 aaattgcgtt ccgtgaagac aaagaggtga tggtggaaga ctatttagtc ggtactgaat
     1861 accgcttctt tgtactgggc gatgaaaccc ttgcggtgtt actgcgtgta ccggcgaatg
     1921 tagtgggaga tggcattcac agtgtaaaag agctggtgga gcgtaaaaat gacgatccgc
     1981 tacgtggcga tggctctcgt agcccgttga aaaaaattgc cttaggtgaa attgagcagt
     2041 tacaacttaa agagcaaggc ttaaccgtag attccgtacc ggcgaaaggt caaacagttc
     2101 aactgcgtgc caattccaac atcagcaccg gcggcgattc gattgatatg accgaccaaa
     2161 tgcacgaaag ctatagacaa attgcagtgg gaattgctca ggcaatgggg gctaaagtgt
     2221 gtggggtgga tttgatcatt cctgatctca ccaaacctgc cgagccaaat ttaagctctt
     2281 ggggcgtcat tgaggcaaac ttcaacccaa tgatgatgat gcacattttc ccttaccaag
     2341 gcaaatcccg ccgtttaacc aaagcggtaa tcaaaatgct gtttcctgag ataggcaatt
     2401 aaattttctc tctatacctc ttttaaggag aatttactca agaatt
//
LOCUS       DANLXD010000183         2417 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.184, whole genome shotgun sequence.
ACCESSION   DANLXD010000183 DANLXD010000000
VERSION     DANLXD010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2417
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.184"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            20..289
                     /locus_tag="PXD18_002527"
     CDS             20..289
                     /locus_tag="PXD18_002527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1040 family protein"
                     /protein_id="HDL6302899.1"
                     /translation="MKCERLEELLELLGEHWRKNPDLHLIDILQQLSVEVGEPDNFKA
                     LSDEVLIYQLKMRNAGKFEPIPGIKKDYEDDFKTALLRARGILND"
     gene            353..991
                     /locus_tag="PXD18_002528"
     CDS             353..991
                     /locus_tag="PXD18_002528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDL6302900.1"
                     /translation="MKKLALKTAFVALSALFTFNSTAIAADPTAGKEYIEVRKAPSAQ
                     KEVVEFFSFYCPHCYDFELSYKIPSQIKEKLPSDSKLVQYHVNFLGRQSEDLTRAWAL
                     AMALGAEDKVKTALFEGAQKDAFKSMDDIRSVFLANGITAEQFDSGINSFAVNGLVNK
                     QVQLAEDFQIRGVPAFFVNGQYQLNLEGFADSSSTNDFIKRYVDAVVFLSKK"
     gene            1075..1851
                     /locus_tag="PXD18_002529"
     CDS             1075..1851
                     /locus_tag="PXD18_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDL6302901.1"
                     /translation="MTKLSILNLVPIREGQTAKQAVDSMVKLAKHAESIGIERYWIAE
                     HHNMKNLASSATQLLIQHALSHTEKLRVGSGGVMLPNHSPYIVAEQYGTLETLYPNRV
                     ELGLGRAPGTDMRTATALRRNAQSLPFPDEISELKGYFEGTNSVSAYPAQGLNVPFYI
                     LGSSPESAYLAAERGLPYAFASHFAPRFMDDAVRIYRTHFKPSEVLDKPYVILGVNAI
                     AAETDQEAEQLATTQTQFFLNVVTNAQNYLQPPVESDDKV"
     gene            1861..2115
                     /locus_tag="PXD18_002530"
     CDS             1861..2115
                     /locus_tag="PXD18_002530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="luciferase"
                     /protein_id="HDL6302902.1"
                     /translation="MKAEIVPHFGPVSFQQNALYNQEKPVVRQMTACSLIGSRESIEQ
                     QLKSLKARIEIDEIMAVSYIFDEQKQHQSYTWLKEIADKV"
     gene            2117..2410
                     /locus_tag="PXD18_002531"
     CDS             2117..2410
                     /locus_tag="PXD18_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HDL6302903.1"
                     /translation="MSKTMQQKAADAHNMCKLKGDSMLDNSDRQIAFEAVYDSEEIAV
                     QAVEFFTQKAKSVETEPCDIQSEITPIIDGFLMKMWITFSCQAEVILFQMAVR"
BASE COUNT          772 a          472 c          499 g          674 t
ORIGIN      
        1 gttttttaag gggtaaaaga tgaaatgcga acgtttagaa gagttattag agttacttgg
       61 cgaacattgg cgtaaaaatc ctgacttaca cctcattgat attttgcagc agctttcagt
      121 tgaagtgggc gagcctgata atttcaaagc gttaagcgat gaagtgttaa tctatcagct
      181 taaaatgcga aatgcaggca aatttgagcc tattcccggc ataaaaaaag attatgaaga
      241 tgattttaaa acggctttat tgcgagctcg tggaatttta aacgattaag attgtcttat
      301 ccgttagcta gtttagcatt tattatttat caacattttt gaaggaatca ttatgaaaaa
      361 attggcatta aaaacggcat ttgttgcact ttctgccctt tttacattta actcaacggc
      421 aatcgctgct gatccaaccg caggcaaaga atatatcgaa gtgcgtaaag caccttctgc
      481 acaaaaagaa gtggtggaat ttttctcatt ctactgccca cactgttatg attttgaatt
      541 aagctacaaa atcccaagcc aaatcaaaga aaaattacca agcgatagca aattagtgca
      601 atatcacgtt aatttcttag gtcgccaatc tgaagattta actcgtgctt gggcattagc
      661 aatggcatta ggtgcggaag ataaagtaaa aaccgcatta tttgaaggtg ctcaaaaaga
      721 cgcattcaaa tcaatggacg atattcgctc tgtattctta gcaaacggca ttacagctga
      781 acagtttgat agcggtatta atagctttgc ggtaaatggc ttagtgaata aacaagttca
      841 attagcggaa gacttccaaa ttcgtggtgt gcctgcattc ttcgtaaatg gtcaatacca
      901 actcaactta gaaggctttg cagattcttc atcaacgaat gatttcatca aacgttatgt
      961 tgatgcggtt gtgttcttaa gcaagaaata accccttaaa atagttaggg tttttacaat
     1021 gctgagtagg taaatcctat tcagcatttt ttatatgcaa actcggagaa caaaatgaca
     1081 aagttatcta tcctaaacct tgtacctatt cgtgaagggc aaactgccaa acaagcggtc
     1141 gattctatgg tgaaattagc aaaacacgcg gaaagtatcg gcattgaacg ctattggatt
     1201 gcagagcacc acaatatgaa aaaccttgcc agctcggcaa cacagctcct cattcagcat
     1261 gccctttctc acactgaaaa attaagagtg ggatcaggtg gcgtgatgtt gcctaaccat
     1321 agtccttata ttgtggcaga gcaatacggt acgcttgaaa cactctaccc taaccgtgta
     1381 gaacttgggc ttgggcgagc accaggcacc gatatgcgaa ccgctaccgc tttacgccgt
     1441 aatgcacaaa gtctgccatt tcctgatgaa atcagcgaac taaaaggtta ttttgaaggc
     1501 acaaattctg tgtctgccta ccctgcacag gggttgaatg tgccgtttta tattttaggc
     1561 tcaagccctg aaagtgccta tttagcagca gaacgtggct tgccttatgc ctttgcttca
     1621 catttcgctc ctcgttttat ggacgatgcg gtgcgaattt atcgcacaca ctttaagccg
     1681 tctgaagtgt tagataaacc ctatgtgatt ttaggtgtga atgcgattgc ggcagaaacc
     1741 gaccaagagg cagaacagct tgctaccact cagactcagt ttttcttaaa tgttgttacc
     1801 aatgcccaaa actatttaca accgcccgtc gaatccgatg ataaagtgtg aaaaaatttt
     1861 gtgaaagcgg aaatcgtacc gcatttcggg cctgtttcgt tccaacaaaa tgcgttatac
     1921 aaccaagaga aacccgttgt tcgccaaatg actgcttgtt cacttatcgg tagccgagag
     1981 agcattgaac aacagctcaa gtcattaaaa gcacgcattg aaattgatga aattatggcg
     2041 gtaagctaca ttttcgatga gcaaaaacag catcaatcct atacttggtt aaaagagatt
     2101 gcagataagg tgtgatatga gcaaaacaat gcaacaaaaa gccgctgatg cacataatat
     2161 gtgtaagcta aaaggcgact ctatgttaga taactcagac cgccaaattg cctttgaagc
     2221 agtgtatgat agtgaagaaa tagctgtaca agcggtcgaa tttttcacac aaaaagcaaa
     2281 atcggtagaa accgagcctt gcgacattca aagtgaaatc acacccatta tagatggctt
     2341 tctgatgaaa atgtggataa ctttcagttg ccaagcagaa gtaatcttat ttcaaatggc
     2401 ggtgagatag atataaa
//
LOCUS       DANLXD010000184         2405 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.185, whole genome shotgun sequence.
ACCESSION   DANLXD010000184 DANLXD010000000
VERSION     DANLXD010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.185"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(161..451)
                     /locus_tag="PXD18_002532"
     CDS             complement(161..451)
                     /locus_tag="PXD18_002532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302904.1"
                     /translation="MNNLSEFKLRYINNPYSNKDTFFIFDELSILLKSLTSDELKKIG
                     TAKNLADRQLNKQRKRCKRYVSEAYRLVEDNKEPYSKFFNHDGITAYNIKAF"
     gene            complement(501..1265)
                     /locus_tag="PXD18_002533"
     CDS             complement(501..1265)
                     /locus_tag="PXD18_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005704989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6302905.1"
                     /translation="MPNITPKLVINALEPAKEKGIGDTLKRAIRLLNEVMNFAVNADV
                     IEFNKCQNVGSNFSVAKSEHNPTIHPKELPQFLAALRDYNLSFQTKMLIKWQLLTMTR
                     SREASETLWSEIDLEAKTWTISAERMKMKRPHVIPLSRQAVEILERMRKITGNSPFVF
                     QSEMKPRQPMNSQTANRAIGLLGYAGTLTAHGMRSIASTYLNEQLVNYDVVEACLAHV
                     IKDQTRKAYNRSDYLDQRVDVMQQWADYVESCSTGI"
     gene            complement(1234..1713)
                     /locus_tag="PXD18_002534"
     CDS             complement(1234..1713)
                     /locus_tag="PXD18_002534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HDL6302906.1"
                     /translation="MARVTTELNNTQIKNAKAQTKDYKLMDGKGLFLLVKKNGSKLWR
                     FRYKKPITGKESDLGIGSYPETTLAQARTIREEYRALLAENIDPLEHRQRLEAEALAE
                     IENTFYKVCLKWRDKCESRVKNGELQALTLKKNWRILEKYLLPCRLLYSKHHAKTSY"
BASE COUNT          684 a          431 c          438 g          852 t
ORIGIN      
        1 tttctatatg atttttttat gattgtttgg cggaattttg gttgaaattt aaatgtaaat
       61 tatatgcttc ataatttcat attttatggg ttttgtgatt gtgatcataa tacacattaa
      121 agaggtttca ggacgatata aaaaaggctc tctaaataga ttagaaagcc ttgatattgt
      181 atgcggttat cccatcgtgg ttgaaaaact tagagtaagg ttctttatta tcttcaacaa
      241 gacgataagc ctctgataca taccttttac atctttttct ttgcttatta agttgtctat
      301 ctgccagatt tttagctgtt cctattttct ttaattcatc ggaagtcagt gattttaata
      361 gtatgcttaa ttcatcaaat ataaaaaatg tatctttatt agaataaggg ttattgatat
      421 atcgtaattt aaactcagaa aggttattca tatttgtaca cctctaatta aacaagcggt
      481 caaattccgc caaaaattta ctaaatcccc gttgagcagc tttctacata atccgcccat
      541 tgctgcatta catctacacg ctgatctaaa taatcagaac ggttataagc ctttcgggtt
      601 tggtctttga taacgtgagc taaacaagcc tctactacat cataattgac taactgctca
      661 ttcaaatagg ttgaggcaat agaccgcata ccgtgagccg ttagagtgcc ggcatagcct
      721 aataagccta tggctctgtt ggcggtttgg ctgttcatcg gttggcgtgg tttcatttcg
      781 ctttgaaaaa caaatgggct attccctgtg atttttcgca ttctttctaa aatttcgacc
      841 gcttgccgtg aaagagggat aacgtgaggg cgtttcatct tcattctttc ggctgaaatg
      901 gtccacgttt tcgcctctaa atcaatttca ctccacaacg tttcgcttgc ctctcgtgag
      961 cgtgtcattg ttaatagttg ccatttaatc aacatcttag tttgaaatga taggttgtaa
     1021 tcacgcaatg cagctaaaaa ttgaggtagc tcttttgggt gtatcgttgg gttatgttca
     1081 gatttcgcta cgctaaaatt tgagcctaca ttttggcatt tgttaaactc gataacgtcc
     1141 gcatttaccg caaaattcat cacttcatta agtagcctaa ttgctcgttt aagggtgtcg
     1201 cctatgcctt tttctttagc aggctctaaa gcattaataa ctagttttgg cgtgatgttt
     1261 ggaatagagt agtcggcaag gcaaaagata cttttcaagg attcgccaat tcttcttcag
     1321 cgttaaggct tgaagttcgc cattttttac acggctttcg catttatcac gccatttcaa
     1381 gcagacttta taaaaggtgt tttctatttc ggctaacgct tcagcctcta atctttggcg
     1441 gtgttcgagt gggtcgatat tttccgctag taatgcccta tattcttctc taatcgttct
     1501 tgcttgggct agggtagttt cggggtaact gcctatgcct aaatcgctct ctttgccggt
     1561 aatcggcttt ttatacctaa accgccataa cttcgagccg tttttcttaa ccagcaaaaa
     1621 cagccccttg ccgtccatta gcttgtagtc tttggtttga gcctttgcgt ttttgatttg
     1681 agtgttattt aattctgtgg taactctagc cataaaaatt tacctaaaat cgcattgtgc
     1741 tttatcagaa tcataaggga tttaagggta tgggtttcat acccttttac gttataccct
     1801 caaatatacc cttaaaataa ggggatgtaa acgcaagaac acgaaagaat acgaatgaag
     1861 aaataattta aaattgctct aaagccagta tcatcaatgg ttttgcgtaa gaatgcgaat
     1921 gaagaaataa gagtggaaaa tttaagttgg tcccagcctc ctctgaactc gcttataact
     1981 tattgattta taaagagata aaataaactc tacaaaaata gggatcattt tagggatcat
     2041 ttacataaaa gctatttatt ttcgtttata aaatgttcat ttgtgcggct aggttggttt
     2101 gtctttccta gttgcatttc tattctatta tcagcaacta ttcagccctt cagcaagatt
     2161 tcatttttca tacatcagca taaaaatatt ttttctgtgc ttgggtaaaa tgtttaggga
     2221 aaatagggaa aatagggaaa atagggaaaa tagggaaaat agggaaaatt tacaaaaaac
     2281 ataataatat caaatagtta aaaaattcca ctttccctaa aatgccccga attttcccta
     2341 ttttttggat tttctttccc tatttttctg tttttgcctt gtgtagggga aaagtcaata
     2401 tttta
//
LOCUS       DANLXD010000185         2291 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.186, whole genome shotgun sequence.
ACCESSION   DANLXD010000185 DANLXD010000000
VERSION     DANLXD010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2291)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2291)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.186"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            198..392
                     /locus_tag="PXD18_002535"
     CDS             198..392
                     /locus_tag="PXD18_002535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302907.1"
                     /translation="MTKFFETIAFVMLFGIIPSCLLAINTTLMNMNIKNAPWFMVIIQ
                     LGFNITCYWLWFISVMRNVI"
     gene            520..1089
                     /locus_tag="PXD18_002536"
     CDS             520..1089
                     /locus_tag="PXD18_002536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein NinG"
                     /protein_id="HDL6302908.1"
                     /translation="MANKPPKQHKCKECGSYYIKFQSTQQVCSVKCAMAMGKRKTEAK
                     RKKSAKIDRLEQRKRLEKLKSRRDFEKDLQKIFNKFIRLRDKDLPCISCGRYHQGKYD
                     AGHYKTVGGNPELRFNEDNCHSQCVPCNRHLHGNIVNYRVNLIEKIGLERVEFLERKD
                     HPPLKLTIEQIKDLIKVYKAKCKELERVT"
     gene            1079..1552
                     /locus_tag="PXD18_002537"
     CDS             1079..1552
                     /locus_tag="PXD18_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302909.1"
                     /translation="MLPRKIKNKWLEPEKQKWIEELLRLWGAWEFGGLDLESRVNMIY
                     RLMKSAEGVKSLSSREVCNDSLGTLINEIFTVVTKRDVMLADILKQKYWFGRSERQIA
                     IYYQLRDSEGRKERRWQEIIQDKCKKAERIIADILESKISSSNSTDKLKKYQFSP"
     gene            1780..1855
                     /locus_tag="PXD18_002538"
     tRNA            1780..1855
                     /locus_tag="PXD18_002538"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1813..1815,aa:Trp,seq:cca)
     gene            1872..2057
                     /locus_tag="PXD18_002539"
     CDS             1872..2057
                     /locus_tag="PXD18_002539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302910.1"
                     /translation="MYNLDDAIQECREKFGEDKPYFSEAGTLTFAGCKALSRLRDEKL
                     GIKAPPNFPFPRVEDLS"
     gene            2083..2253
                     /locus_tag="PXD18_002540"
     CDS             2083..2253
                     /locus_tag="PXD18_002540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302911.1"
                     /translation="MTEQLNTQSKSGEEDQEKSQDRYAVGWPSRRISDCVQHFRSRKI
                     YPFASNNDVKQG"
BASE COUNT          720 a          356 c          529 g          686 t
ORIGIN      
        1 ttttcttagt cattcttact gttagatatg taggttattt attgatttat ccattagcat
       61 tctttgcagc agtcggtagt tttattgttt tctgtcaatg gacatatcaa gaatggcttt
      121 attattttaa gcgcggtttt gctccgattt agtgtgtgtt tattaattcc ctcgaattcg
      181 ggggaaggag aagtaagatg acaaaatttt ttgaaactat cgcattcgtg atgttatttg
      241 gcattattcc aagctgtttg ttggcgatta atactacttt aatgaatatg aatattaaaa
      301 acgcaccgtg gtttatggtg attattcagt taggttttaa tatcacttgt tattggttgt
      361 ggtttatttc tgttatgcgg aatgttattt aaggagatta ataagtgagc cagtgcaatg
      421 aactgactgt aattttaatc gccatcgcta ttcttagtgt atgtgccggt tcactctttt
      481 ttattgagtg gtttgataag agagatggtg agggttggaa tggctaacaa accacctaaa
      541 caacacaaat gcaaagagtg cggcagttat tacatcaaat ttcaaagcac gcagcaggtc
      601 tgctctgtta agtgtgctat ggcaatgggt aagcgtaaga cagaggcgaa acgcaaaaaa
      661 agtgcaaaaa tcgaccgctt ggagcaacgg aagcggctgg aaaaattgaa aagccgtaga
      721 gattttgaga aagatttaca aaagatattt aataaattca ttcgcttgcg tgataaagat
      781 ttaccctgta tttcctgtgg ccgctatcat caggggaaat atgatgcagg gcattataaa
      841 accgttggtg gtaatcctga gctacgtttt aatgaagata attgccacag tcaatgtgtg
      901 ccgtgtaacc gacatctgca cggcaatatt gtgaattatc gagtaaatct gattgagaaa
      961 atcgggcttg agcgtgtgga atttttagag cgtaaagacc acccaccatt aaaacttact
     1021 atcgaacaaa tcaaagattt aatcaaagtc tataaagcga agtgcaagga gcttgagcgt
     1081 gttacctaga aaaattaaaa acaagtggtt agagcctgaa aagcagaaat ggatcgaaga
     1141 gttgctaagg ttatgggggg cgtgggaatt tggcggattg gatttagaaa gtcgggtaaa
     1201 tatgatttac cggctgatga aatctgcgga gggggttaaa agtctttcat ctagagaggt
     1261 ttgtaacgat agcctcggca cgctgatcaa tgagattttt acggtagtca ccaaaagaga
     1321 cgtaatgtta gccgatatac tcaaacaaaa atactggttc gggcgttcgg agcggcaaat
     1381 cgctatttat tatcaactaa gggacagcga gggtagaaaa gaaagacgat ggcaagaaat
     1441 tattcaagat aaatgcaaaa aagcggaaag aattattgca gatattcttg aaagcaagat
     1501 ttcatccagt aattctacag ataaactgaa aaaatatcaa ttttcccctt gattttagtg
     1561 cgtaacaagt gtatattttg tgctaatggt ggacgtagta taaatgatgt ttaccaatgt
     1621 tagttaaaga cgcagcctga agtaatattc agttcggagg agaataacta gaaacgacgt
     1681 cgagtatagt tatttcagcg tttgcgtggc agtatgccga ccgaattagt ttaacagccc
     1741 tgagcagaaa tgcttggggc ttttttgttt acggatttta agggtgtagc tcagttggta
     1801 gagcagcggt ctccaaaatc gttggttgtt ggtttgagtc caaccaccct ttccaaatgc
     1861 gagtaaatgt tatgtataac cttgatgatg caattcaaga atgcagagaa aaatttggtg
     1921 aagataagcc ttatttttct gaagctggaa cacttacttt tgctggttgc aaagccctct
     1981 ctcgattaag agatgaaaag ttaggaatta aggctccgcc aaatttccct ttcccaaggg
     2041 ttgaagatct atcttagcta caaaaatcaa tgagggattg ctatgacgga acaactaaat
     2101 actcagtcaa aaagcggtga agaagatcaa gaaaaatctc aagatcgcta tgccgtgggc
     2161 tggccatctc gacgtatatc agattgcgtt cagcacttcc gaagtaggaa aatttatcca
     2221 tttgccagta ataatgacgt gaagcaaggt taaatgcttc tggtggtaca gagtaaattc
     2281 aatcattttt a
//
LOCUS       DANLXD010000186         2245 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.187, whole genome shotgun sequence.
ACCESSION   DANLXD010000186 DANLXD010000000
VERSION     DANLXD010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.187"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(344..1585)
                     /locus_tag="PXD18_002541"
     CDS             complement(344..1585)
                     /locus_tag="PXD18_002541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA domain-containing protein"
                     /protein_id="HDL6302912.1"
                     /translation="MMNKRIYVFADWETFSQPELVGVLSSDVVRGKENFRFSYDNEWL
                     SSPYVQQIDPNLYLYPGEQYSTDTQNFHIFLDSCPDRWGRLLMKRREAALASQENRKP
                     KLLIESDYLLGVHDMNRMGALRFKTELNGPFLDNNTRLAAPPLSSLRELEFAAIQLES
                     SDNVDDPDYLKWLHMLISPGSSLGGARPKASVIDELNQLWIAKFPSRYDDYDIALWEY
                     LAYRLAIQAKIEMATCRIERFNQEHHTFLTQRFDRHCGKRRHFTSALTQLGYYDGDYE
                     ASYLEIAQFLTESGSNTRIDLAQLWRRIVFNIAISNTDDHLRNHGFIYAQEGWILSPA
                     YDLNPVPLSQGLHLNITDSDNRLDYQLAFDVADFFQLSKQQAVQIYDEVLKEINNWQN
                     VAKEIGIPRQEQEQMKFAFNV"
     gene            complement(1585..1896)
                     /locus_tag="PXD18_002542"
     CDS             complement(1585..1896)
                     /locus_tag="PXD18_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6302913.1"
                     /translation="MVIIMLSKTKSPTLFPKYQNALLQLGENIRLASKRRMFTQTLLA
                     QRTGLSRVTVRKIMNGDPTVAIGYYLMVLGVLGLEQDFTDVGKDDELGRKLQDIELLR
                     K"
BASE COUNT          683 a          426 c          396 g          740 t
ORIGIN      
        1 aaatgttagt ttttctgatg tctgccatct gctaggcatt atatatgcct agattagttt
       61 cctacatttg cgtttttaag gctacgcttc cttgcggata tggttgagaa aaaagtcaag
      121 tgttactaat ggttttataa gatgttggtt tgttctggtg tctgccaccg ctaggtcttt
      181 ataccctaga ttagtatcag gtctttctgg tgcctgccac cgctaggcct ttacatccta
      241 gattaatatc agattgacaa tgagccaaca actcattgcg ttattaaggt aacgctactt
      301 ttttagaaca tagactacga tgattggttc cacaagtcaa ttactataca ttaaatgcaa
      361 atttcatctg ctcttgctct tggcgtggaa taccaatttc ttttgcgaca ttttgccaat
      421 tattaatttc tttcagtact tcatcataaa tctgtacggc ttgttgctta gataattgaa
      481 aaaagtcagc aacatcaaag gcgagctgat aatccaatcg gttatcgctg tctgttatgt
      541 ttaaatgtaa tccttgagat agtggtactg ggtttaaatc gtatgcggga gataatatcc
      601 acccctcttg agcgtagata aatccgtggt tacgcaaatg atcatcagta ttcgaaatag
      661 caatattgaa tacaattctt ctccatagtt gagccaagtc aattcgagta tttgaaccac
      721 tttctgttaa aaattgagca atctcaaggt agcttgcctc atagtctccg tcataataac
      781 ccagctgggt taatgctgac gtaaaatggc gacgttttcc acaatgtcga tcaaatcttt
      841 gtgtcaaaaa agtatggtgt tcttggttaa agcgttcaat tctacaagta gccatttcaa
      901 ttttggcttg aatagccagt cgataagcta aatattccca aagagcaata tcataatcat
      961 cgtaccgact tggaaatttg gcaatccata gttgatttag ttcatctatt accgaagctt
     1021 ttggtctagc tccgcctagt gacgaccctg gtgatatcaa catatgaagc cattttaaat
     1081 aatccggatc gtccacatta tcactgcttt caagttgtat tgctgcaaat tctaattctc
     1141 ttaaggaaga cagtggtggt gctgcaagac gagtattatt gtccaaaaat ggaccattca
     1201 attcagtttt aaaacgtaaa gcccccattc tattcatatc gtgtacgcct aaaaggtaat
     1261 cactttctat tagtaactta ggtttacgat tctcttgact agctagagct gcctcccgac
     1321 gtttcattaa caatctaccc catctatcag ggcaagaatc taaaaagata tgaaaatttt
     1381 gtgtatctgt actgtattgc tctccagggt aaaggtataa gttaggatca atctgctgta
     1441 catagggtga acttaaccac tcgttatcgt agctaaaacg gaaattttct ttgcctctca
     1501 ctacatcaga agaaagcacc ccaactaatt caggctgtga aaaagtttcc caatctgcaa
     1561 acacataaat tcgtttattc atcattattt ccttaataat tcaatatctt gcaatttacg
     1621 tcctaactca tcatcctttc caacatcagt gaaatcttgt tctagaccga gaacacctaa
     1681 aaccattagg tagtatccaa tcgcaacagt tggatcacca ttcataattt ttctcactgt
     1741 tacacggcta agcccagttc tttgagccaa taatgtttga gtaaacattc tcctttttga
     1801 ggctagccta atattttctc caagttgaag caaggcattt tggtacttag gaaacagagt
     1861 tggtgatttt gttttactga gcattattat taccattttt atgttttttg gaaattataa
     1921 tatccattta tagcaattgc aagagcagtt atgtaaacag taaaataggt agagagggtt
     1981 tttcggaaaa aaatatctgg tgaagttttg actaaatttg aattaaaaga aaaaatagat
     2041 tttttcaaat aaaatcaatc taaaaaatga ttttcaggct ttacaaactt gaaagaatgt
     2101 gtaagatcta gaacgtctga aattcggacg gaaaatccca atggatgtat tggctggata
     2161 catcgtagta actgtgtatt tgcgaatatg atttgaacaa tcctacacaa acgattcaaa
     2221 atccgccgcc cataaagcgt gtcgg
//
LOCUS       DANLXD010000187         2097 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.188, whole genome shotgun sequence.
ACCESSION   DANLXD010000187 DANLXD010000000
VERSION     DANLXD010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.188"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(80..772)
                     /locus_tag="PXD18_002543"
     CDS             complement(80..772)
                     /locus_tag="PXD18_002543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDL6302914.1"
                     /translation="MILFAGDPHGSYEHLYPILQQQTEEVALVILGDLQLTTPDELDR
                     LSQYCDIWFIHGNHDSKTVAAFDAIWNSSWKERNIHGKVVDIQGIKIAGIGGVFRGHI
                     WMPPNRPMFFDPIHFCQYSAPEKIWRGGIPLRHRSSIFPSDFEALENEKADILITHEA
                     PKPHPQGFSVINQLARKLGASKIFHGHYHDNFNYGNLNVSRECAIYNIGFRSLADING
                     NYLILGVDDREK"
     gene            complement(790..2064)
                     /gene="nadR"
                     /locus_tag="PXD18_002544"
     CDS             complement(790..2064)
                     /gene="nadR"
                     /locus_tag="PXD18_002544"
                     /EC_number="2.7.1.22"
                     /EC_number="2.7.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional transcriptional
                     regulator/nicotinamide-nucleotide
                     adenylyltransferase/ribosylnicotinamide kinase NadR"
                     /protein_id="HDL6302915.1"
                     /translation="MTDFAYLQQKRKQLKLKVNDICEQAGVTRAYFNQLVSGKIKNPS
                     ANKLKALHSVLDIVEDSNQRSGVIFGKFYPIHTGHINMIYEAFSKVDVLHVIVCTDSE
                     RDLRLFQESKMKRMPTNEDRLRWVQQIFKYQQKQIFIHHLVEDGIPSYPNGWEDWSGR
                     VKALFEEKSINPTIVFSSEIQDKESYEKYLNLEVQLVDPTRESFNISATQIRNNPFQY
                     WRFIPKEVRPFFVKTIAILGGESSGKSVLVSKLANVFNTTSAWEYGREFVFEQLGGNE
                     QAMQYSDYPQMVLGHQRYVDYAMKHAHKVAIIDTDYITTQAFCIQYEGKAHPFLDSMI
                     REYPFDVTILLSNNTKWVADGLRSLGSKKQRQQFQHLLKKLLEKHHIPYIKIESPSYL
                     DRYNQAKEVVEAILNEEPIPLQFKQYNIHEFE"
BASE COUNT          637 a          401 c          378 g          681 t
ORIGIN      
        1 aaatttctcg cattttactt ataaatttat gaatgggaag ggtaaaatga caatttgttt
       61 aattcagtca aatttttggc tatttctctc gatcatcaac acctaaaatt agataatttc
      121 cattaatatc cgctaggcta cgaaagccga tattataaat agcacattct ctgctgacat
      181 ttagattgcc ataattaaaa ttatcatggt agtggccatg gaaaattttg ctcgccccta
      241 attttcttgc tagctggttg attacagaga agccttgagg gtgtggcttt ggtgcttcgt
      301 gtgtaattaa aatatcggct ttttcatttt ccaatgcttc aaaatcagaa gggaagatcg
      361 aagagcggtg ccttaatgga ataccaccac gccaaatttt ttccggagca gagtattggc
      421 aaaaatggat gggatcaaaa aacattggac gattgggcgg catccaaata tgacctcgga
      481 agacccctcc aatacctgca atttttattc cttgaatgtc aactacttta ccgtgaatat
      541 tgcgttcttt ccagctacta ttccaaatag catcaaaggc agcaacggtt ttactgtcat
      601 ggttaccatg aataaaccaa atatcacaat actgcgaaag ccgatctaat tcatcaggag
      661 tagtcaattg aagatcgcct agaataacta aagctacctc ctccgtctgc tgttgtagaa
      721 tcggataaag atgctcgtag ctaccgtgtg gatcgcctgc aaaaagtatc atgttatttc
      781 ctgtggcagt tattcaaatt cgtgaatatt atattgctta aactgtaatg ggattggttc
      841 ttcatttaaa atagcttcta ccacctcttt ggcttgattg tagcgatcca aataacttgg
      901 agattcaatt ttaatataag gaatatggtg tttttctagt agttttttca gtaggtgttg
      961 aaactgttga cgctgttttt tcgatcctaa actgcgtaaa ccatcggcta cccattttgt
     1021 attgttagaa agtaaaatcg tcacatcaaa aggatattcg cggatcattg aatccagaaa
     1081 cgggtgagcc ttcccttcat actgaataca gaacgcttga gttgtgatgt aatcggtatc
     1141 aataatagcc actttatgag catgtttcat ggcataatca acgtagcgtt gatgtccaag
     1201 caccatttgc ggatagtcgg aatattgcat tgcttgttca ttgccaccaa gttgctcaaa
     1261 cacaaactca cgcccatatt cccaagcaga ggtagtgtta aatacattcg ctaatttgct
     1321 caccaacact gatttaccac tgctttcacc acctaaaatc gcaatagttt taacaaagaa
     1381 aggacgaact tctttcggaa taaagcgcca gtattgaaaa ggattattac gaatttgtgt
     1441 tgctgaaata ttaaaggatt cacgagtagg atcgacaagt tgaacttcta gattcaaata
     1501 tttttcataa gattctttat cttgaatttc actactaaaa acaatagtag gattaatgct
     1561 tttttcttca aatagcgctt taacacgacc agaccaatct tcccagccat ttggatagct
     1621 cggaataccg tcttcaacta aatggtgaat aaagatctgt ttttgttggt atttaaaaat
     1681 ttgctgtacc cagcgtagcc gatcttcatt tgtcggcatt cgtttcattt tactttcctg
     1741 gaaaagacgt aaatcccgtt cagaatcggt acaaacaata acatgtaaaa catctacttt
     1801 actaaatgct tcatagatca tattaatatg acctgtgtga ataggataga atttgccaaa
     1861 aataaccccg gaacgctggt tgctatcttc tacgatatct aaaacggaat gcaaggcttt
     1921 aagcttattg gcgcttggat ttttgatttt tccgcttact aactgattaa aataagctcg
     1981 ggttacccca gcttgttcac aaatatcatt cactttgagt ttaagctgtt tgcgcttttg
     2041 ttgaagataa gcaaaatctg tcataatgat tccctcgatt ttttgatgat tatcata
//
LOCUS       DANLXD010000188         2091 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.189, whole genome shotgun sequence.
ACCESSION   DANLXD010000188 DANLXD010000000
VERSION     DANLXD010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2091)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2091)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.189"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..1576)
                     /locus_tag="PXD18_002545"
     CDS             complement(<1..1576)
                     /locus_tag="PXD18_002545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exo-alpha-sialidase"
                     /protein_id="HDL6302916.1"
                     /translation="MEKMMRKINQLIISPYFFLSILSASANSDFWKSDLNFNLTNITK
                     RVGVDNFTTPVAGEPWAGIGPNGEAAGTAPLYYSRIPAMQVTEDNKLVVMFDLRWNRA
                     YDQDRIDPGIAISSDGGHTWTKKTAWSFDRTNHPARRSMDPTLLHNPIDNSLYVMHGT
                     WSMSDQQWYGGRVPHFNSGSWAATIYKSTDGGLNWEKNTEFSKFSNLDVFSKVTKNGK
                     PTLGFLGGVGSGIVMQDGTLVFPIQTAHQNGIATTIMYSKDNGKTWEMPEIDNPVAPN
                     QSSLENMVFELEPGKLVMTGRGNSRWAYSSTDMGKTWELFTPTNGLLPTSSQPTQGSS
                     IYVTLPNGRKVLLISKPDGKNDGWKRGDITLWMLDAKDPSHKHKVHIIRPGSGNAAGA
                     GYSSLAYKEGNLFVAFENDGDISVKNLTEHIAEMEAKAIEWGLPDELTPALDKINALP
                     YLNKAQKETLVEKMRRANDTAIAQSFVINKEMYNLKNNSDELDKLAKNITKALPSQQN
                     IYQRALAYVNKVTNTAD"
BASE COUNT          639 a          400 c          385 g          667 t
ORIGIN      
        1 tatccgctgt attggtgact ttattcacat aggctaaggc tctttgataa atattctgtt
       61 gagacggcag tgctttagta atattttttg ccaatttatc cagctcatca ctattgtttt
      121 tcagattata catttctttg ttaatcacaa aagattgtgc aatcgcagta tcattagcac
      181 gacgcatttt ttcgactagc gtctcttttt gagctttatt gagataaggc agtgcattga
      241 ttttatccaa agcaggagta agttcatctg gtaatcccca ttcgatagct tttgcttcca
      301 tttcagcaat atgttcagtt aaatttttta ctgaaatatc accatcgttt tcaaaagcaa
      361 caaataaatt cccttcttta taggctaaag aggaataacc agcaccagcg gcattacctg
      421 aacctggacg aataatatgc accttgtgtt tgtgcgatgg atcttttgca tctagcatcc
      481 aaagtgtaat atcacccctt ttccacccat cattctttcc atctggttta gagattagta
      541 gcacttttcg accatttggt agtgttacat agatagaaga gccttgagtt ggttgtgagc
      601 tagttggtaa taatccatta gttggagtaa ataattccca ggtcttaccc atatcagtag
      661 aagagtatgc ccagcgactg tttcctcgtc cagtcatcac tagcttaccc ggttcgagtt
      721 caaacaccat attttctaaa gaactttggt tcggtgcaac tgggttgtca atttctggca
      781 tttcccaagt tttcccatta tccttagaat acataatagt ggtcgcaata ccattttgat
      841 gtgcggtttg aattgggaaa accaacgtac catcttgcat tacaattcca gatccgaccc
      901 cgcctaaaaa gcctaaggta ggttttccat ttttggtgac tttagaaaat acgtctaaat
      961 tgctgaattt actaaactca gtatttttct cccaatttaa accaccatca gtagatttat
     1021 aaatggtagc tgcccagctg ccactattaa agtgaggaac acgcccacca taccattgtt
     1081 gatccgacat agaccaagtt ccgtgcatta catataaact attatcaata ggattatgta
     1141 atagcgttgg atccattgaa cggcgtgctg ggtgattagt tctatcaaaa gaccaagcgg
     1201 ttttcttcgt ccaagtatgg ccaccatcgg aagaaatcgc aataccagga tcaatacgat
     1261 cttggtcata cgcacgattc cagcgtaaat caaacataac aactaatttg ttatcttcgg
     1321 taacttgcat agctggaata cggctataat ataatggcgc agtacctgca gcttcaccat
     1381 ttggaccaat accagcccaa ggctcgccag ctactggagt ggtaaagtta tcgactccga
     1441 cacgcttggt aatatttgtg agattaaaat taaggtcgct tttccaaaaa tcagagttag
     1501 cggaagcaga taaaatactt aggaaaaagt atggggatat gattaactga ttgatttttc
     1561 tcatcatttt ctccattagg gggataaagt gcaaagacta atttttagct gaacagctat
     1621 tatatggttc aatcttatgt ataaaatacc agatagcaag taattataac ggcattttat
     1681 gcttaagatt taagcacaaa aaaataaaaa aatctgagag atttgtcaca attattgaaa
     1741 aaagtgatat tttttaaata tcaccgaagc ccaagctttg tatcaaggtt tcatcttaat
     1801 gttagtgata aaagtgactt tttctgaact ttggtgtaaa aaatataaga gctgtaacaa
     1861 aaaggccgcc aggcaataac ctaacggcat tacaagcggt catatttggc ggaaaatttg
     1921 ctaggctact taaaatttgc gatatgaaat gtttagtgcc attgagctaa aacaacaaaa
     1981 aagcctgtaa acgttgattt tacaggcttt ctaaggtttt ttcgtttagc tctgttgaac
     2041 taaatttagt caaatggtgc ctggtcgaga cttgaactta atggcttcaa g
//
LOCUS       DANLXD010000189         2065 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.190, whole genome shotgun sequence.
ACCESSION   DANLXD010000189 DANLXD010000000
VERSION     DANLXD010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.190"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(144..362)
                     /gene="ilvM"
                     /locus_tag="PXD18_002546"
     CDS             complement(144..362)
                     /gene="ilvM"
                     /locus_tag="PXD18_002546"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 small subunit"
                     /protein_id="HDL6302917.1"
                     /translation="MEEYQLTLKANKRPETLERILRVIRHRGFEVKCLNVESTDSAFN
                     LNFTLASKRPLSLLSHQLEKLFDIIEIN"
     gene            complement(372..2024)
                     /locus_tag="PXD18_002547"
     CDS             complement(372..2024)
                     /locus_tag="PXD18_002547"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 catalytic subunit"
                     /protein_id="HDL6302918.1"
                     /translation="MNGARFITESLKAHGVTTLFGYPGGAIMPTYDAIYDSGLDHLLC
                     RNEQGAAMAAIGYARATGKVGVCIATSGPGATNLITGLGDAALDSIPVVAITGQVASH
                     LIGTDAFQEADVLGLSLACTKHSFIVQNIEELPEILALAFQIAQSGRPGPVLVDIPRD
                     VQLAQTSALPIVYPKEPADAQDPNKLVVAKQLLATAKRPVLYVGGGVSMADGVQAVRN
                     FVKIANIPSVSTLKGLGTIDPTDPLYMGMIGMHGTKAANYAVQECDLLIACGARFDDR
                     VTGKLDTFAPHAKVIHIDIDNAEINKLRQAQVALKGNLIEAVNYLAQPLDIEPWREDV
                     RNLKQQFDFQYQENSGDGNIDAVALLHTLSQRKAKNSIVTTDVGQHQMWSAQHLTYHD
                     PKNYITSAGFGSMGFGLPAAIGAIKARAEDQVILITGDGSIMMNIQELGTLKRADLAV
                     KILLLDNQRLGMVRQWQSLFFHGRHSQTILDDNPDFVLLAKAFDIDGERIEKASEVSD
                     AIDRMFNAKGAYLLHVCIPQEDNVWPLVPPGACNADMLDDEV"
BASE COUNT          595 a          446 c          435 g          589 t
ORIGIN      
        1 tgttgaatgg gaaaataaag agcaataagt gaaaaaaaag agttgaaatt tgaagaaatg
       61 aataaaatca aaaggatagc gaatgataaa ttttaagcat aaaaaagccg tgtatttttt
      121 tacacggcga atgaaaagtc tgattaattg atttcaatga tatcaaacag tttttctaat
      181 tgatggctta aaagagagag tggacgttta cttgctaatg taaaatttag gttaaaggcg
      241 ctgtctgttg attctacatt taagcatttc acctcaaaac cacggtgacg tataacccgt
      301 aaaatacgct ctaaggtttc agggcgtttg ttagctttaa gcgttaattg atattcttcc
      361 atcttattct cctatacctc atcgtctaac atatcggcat tacacgcccc cggcggtacc
      421 agtggccaaa cgttatcttc ctgtggaata caaacgtgaa gtaagtaagc ccctttggca
      481 ttgaacattc tgtctattgc atctgacact tcgctcgctt tctcaattcg ctcaccgtca
      541 atatcaaagg ctttcgccaa caacacaaaa tcagggttat catctaaaat ggtttggctg
      601 tgtcgcccgt ggaagaacag cgattgccat tggcgaacca tacctaaacg ttggttatcc
      661 agtaatagga ttttgaccgc taaatcagct cttttaagcg tgccgagttc ttgaatattc
      721 atcataatcg agccatcacc ggtaattaaa ataacctgat cttccgctcg agctttgatt
      781 gccccaatcg ccgcaggcaa gccaaaaccc atagagccaa aaccggcaga ggtgatatag
      841 tttttcggat cgtgataagt taaatgttgt gccgaccaca tttgatgctg ccctacatcg
      901 gtagtgacga tgctgttttt ggctttccgc tgtgaaagcg tgtgtaataa cgccacggca
      961 tcaatattgc catcaccact attttcttga tattgaaagt caaattgctg ctttaaatta
     1021 cgcacatctt cacgccatgg ttcaatatct aacggttgag ccaagtaatt cacggcttca
     1081 atcaaattcc cttttaaggc aacttgtgct tgacggagct tgttgatttc cgcattgtcg
     1141 atatcaatgt gaatcacttt agcgtgaggg gcaaaagtgt ctaatttgcc ggtaacacgg
     1201 tcatcaaagc gggcaccaca ggcaatgagt aaatcacact cttgtaccgc gtaatttgct
     1261 gcttttgtgc cgtgcatacc gatcattccc atatagagcg gatcggttgg atcgatagtg
     1321 cctaaccctt ttaaggtaga aacagacgga atatttgcaa tttttacaaa atttctgacc
     1381 gcttgtacac catcagccat actaacgcca ccgccgacat aaagtaccgg gcgtttggcg
     1441 gtggctaata attgtttggc aaccactaat ttgttgggat cttgtgcatc ggcaggttct
     1501 ttaggataaa cgataggcag agccgaagtt tgagctagtt gcacatcacg tggaatatcg
     1561 accagcaccg gaccaggtct gccactttgt gcaatttgga atgcgagggc taaaatttca
     1621 gggagctcct caatattctg aacaataaaa ctgtgtttag tgcaagcgag tgacaaacct
     1681 agtacatcag cttcttggaa ggcatcagtg ccgattaaat ggctggcaac ttgtccggta
     1741 attgctacca caggaataga atcaagtgcg gcatcgccta aaccggtgat taaattagtt
     1801 gccccagggc cggaggtcgc aatacaaacc cctactttac ctgttgcacg ggcataaccg
     1861 atagctgcca ttgcagcacc ttgttcattg cggcaaagta aatgatctaa gcctgaatca
     1921 taaattgcat cataggtagg cataatagcc ccgcccggat agccaaaaag tgtcgttacc
     1981 ccgtgagctt ttaaactctc ggtgataaat cttgctccat tcatggatgt tgtgtcctta
     2041 atatttttat tattttaaaa ccagg
//
LOCUS       DANLXD010000190         2056 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.191, whole genome shotgun sequence.
ACCESSION   DANLXD010000190 DANLXD010000000
VERSION     DANLXD010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.191"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            104..1054
                     /gene="coaA"
                     /locus_tag="PXD18_002548"
     CDS             104..1054
                     /gene="coaA"
                     /locus_tag="PXD18_002548"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HDL6302919.1"
                     /translation="MSLEKTSKITPFLTFDRQQWADLRKSVPLKLTEQDLKPLLGFNE
                     DLSLEEVRTIYLPLARLIQYYIEENLKRQTVLHRFLGIEPPKVPYIISIAGSVSVGKS
                     TSARILQALLSHYPKERKVDLITTDGFLYPLATLTEKNLLKKKGFPESYDIHSLIRFV
                     SDIKSGKRNVKAPIYSHLTYDIIPNQFNTVDQPDIVILEGLNVLQSGMNYPSSPHNVF
                     VSDFVDFSIYVDAEESLLKKWYINRFLKFRRSAFADPNSYFHHYASLSEQEAIETAST
                     IWEEINGLNLRQNILPSRERANLILIKGQDHAIETVKLRK"
     gene            1207..1746
                     /locus_tag="PXD18_002549"
     CDS             1207..1746
                     /locus_tag="PXD18_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HDL6302920.1"
                     /translation="MNKKFLLPLILFLALSVAFLVQLARNSQGDDPKKLESALIGKTV
                     PSFNLESVLDEKQTIDQNIVKTGKPRLLNVWATWCPTCYAEHEYLTILAKQGVEIVGI
                     DYKDERPKAIKFLANYGNPYKAIIFDPKGSLGLDLGVYGAPETFIIDGNGVIQYRHAG
                     DVNDQVWNQVLKPIYDGLK"
BASE COUNT          658 a          417 c          347 g          634 t
ORIGIN      
        1 ctctgcataa ctacggcaaa ataagtgcat atattgtata gttacgccct taatttggta
       61 tttaattacc ttaatattcc agcaaaaaat tgagattttg gctatgagcc ttgaaaaaac
      121 cagcaaaatt actccttttc tcacttttga tcgccaacaa tgggctgatt tacgcaaatc
      181 cgttccattg aagctgaccg agcaagacct aaaaccgctt ttaggcttta atgaagatct
      241 ttcattagaa gaagtacgca ctatttattt accgcttgcc cgtttaattc aatactatat
      301 agaagaaaac ttaaaacgcc agacagtctt acatcgcttt ctcggcattg aaccgccaaa
      361 agtcccttac attattagta ttgccggcag cgtatcggtt gggaaaagta cctctgcccg
      421 tattctgcaa gctctgctct cccattaccc taaagagcga aaagtggatt taattaccac
      481 cgacggtttt ttatatccac ttgcaacgct aaccgaaaag aacttactca agaaaaaagg
      541 ctttccggaa tcttatgata ttcacagcct gattcgcttt gtatctgata ttaaatccgg
      601 caaacgcaat gtgaaagctc cgatttattc acatttgacc tacgatatta tcccaaatca
      661 atttaatacg gtggatcaac ccgatattgt gattttagaa gggctaaacg tgttacaaag
      721 tggaatgaac tacccgtcca gcccacataa tgtatttgta tcggactttg tggatttttc
      781 tatttatgtg gatgccgaag aaagtttgct gaaaaaatgg tatatcaacc gtttcttgaa
      841 attccgccgc agtgcctttg ccgacccaaa ctcctatttc caccattatg cgagtttgtc
      901 cgagcaagaa gcgattgaaa ccgcctcaac gatttgggaa gagatcaacg gcttaaattt
      961 acgccaaaat attctcccaa gccgagagcg tgccaacctc attttaatca aagggcaaga
     1021 ccacgccatt gaaacggtaa aattacgcaa ataatatttt gcaaataatt gggctttttc
     1081 gaccgcttgt aataccttaa aatccgttga ataccactca acggattttt tatttaaatc
     1141 aatgcttatt caactatttt ttggtaagct aacgactttg agagtgattg atattaggca
     1201 tatacaatga acaaaaaatt tctacttcct ttaattctct ttttggcgtt atctgtggca
     1261 tttttggttc aactcgctcg caactcgcaa ggcgatgatc cgaaaaaatt agaatcagcc
     1321 ttaattggca aaacagttcc gagctttaat ttagaatcgg tattagatga aaaacagaca
     1381 atcgaccaaa atatcgtcaa aaccggcaaa cctcgcctgc ttaacgtgtg ggcaacttgg
     1441 tgtccgactt gttatgccga acacgaatac ttaaccattt tggcaaaaca aggggtggaa
     1501 attgtcggta ttgattataa agacgaacgc ccaaaagcga ttaaattctt agccaattac
     1561 ggcaaccctt ataaagcgat tatttttgac ccgaaaggct cactcggttt agatttaggt
     1621 gtttatggtg cacccgaaac ctttattatt gacggcaacg gcgtgattca ataccgccac
     1681 gccggcgatg taaacgacca agtgtggaac caagtgctta aaccgattta tgatggatta
     1741 aagtaaatgt ttgtatttcc tgctgacatt aagaaatcta taaaaagcaa ttatcaaaga
     1801 gaatataact ttatttttat aatagttggt ttatcaacta ttataggaat aattctaact
     1861 attttatcct catttttatt gctaaactat ttagttagca ttgatgcaag aaatttattc
     1921 attaactcat taaacagtaa cttctcaacc atatttattc ctatagcatt atttttattt
     1981 ttccctataa tgctgatgaa tatgcaacct attaagtatt acttatcact tgaaaaaaca
     2041 aatacaaaca acaagt
//
LOCUS       DANLXD010000191         1992 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.192, whole genome shotgun sequence.
ACCESSION   DANLXD010000191 DANLXD010000000
VERSION     DANLXD010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1992)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1992)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.192"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..558)
                     /locus_tag="PXD18_002550"
     CDS             complement(<1..558)
                     /locus_tag="PXD18_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL6302921.1"
                     /translation="MPNFSFTHLYKKHTKELPTVTLLSALIGLSQVSYANPLPLGNTT
                     GTNNLAVGEGSFALGTGSQAIGKNAIATGGNISPQEFNVELENFRDLVNQIEELRTQI
                     AEQEKQGSVNQQLQDALKSQIAQYDTILERVREKQAQQAILANSVISMRKELVNRRNQ
                     LTELENNFNTSFLTGKNKQEAYQKFS"
     gene            complement(752..1981)
                     /locus_tag="PXD18_002551"
     CDS             complement(752..1981)
                     /locus_tag="PXD18_002551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HDL6302922.1"
                     /translation="MQFREINPSPRLLMCPGPTDADPRVLRAMSAPILGQFDPEFTSL
                     MNETMEMERRLFQTKNEQTYVVNSTSRGGLETVLTAAICPGDKVLIPAFGRFGYLLNE
                     ILARSGADITIIEREWGTVFEPEEIEAELKKGGYKAVAIIHGETSTSMMQPLEEIGKI
                     CKQYDAMLIVDTVATLGGVDIRVDEWGIDACIGGTQKCISAPSGTALITYNKRIEEII
                     AKRKRVEKGIRAESDVDGTLPPIPSNYLDLAQLQDYWSPRRLNHHTETTSAQYGVHEA
                     LRIILQEGLEARFARHILNDKALCAGLEAMGLKIFGDRKHKAPVVTAFHIPEGMSGPA
                     LRSDILNHFGIELATSFGPLDGKVIRIGNMGFSSQKRNVLLTLGALEAVLLSHKVKVP
                     SGDAVAAALAVYKEADK"
BASE COUNT          559 a          383 c          388 g          662 t
ORIGIN      
        1 agaaaatttt tgatatgctt cttgtttatt ttttcctgtt aaaaaactag tattaaaatt
       61 attttccaat tctgttaact gatttcttct attaactaat tctttccgca ttgatataac
      121 actattggct aatattgctt gttgtgcttg tttttcacgt acacgctcta aaatagtgtc
      181 atattgagca atctgactct ttaaagcatc ttgtaattgt tgattaacag agccttgttt
      241 ttcttgttca gcaatttgag tacgtaactc ttcaatttga ttaactaaat cacggaagtt
      301 ttctaactcc acattgaatt cctgggggga gatattacca ccggttgcaa tggcattctt
      361 gccgattgct tgagaacctg tgcctaacgc aaaactacct tcacctacag caaggttatt
      421 ggtgccagtg gtgttgccta aaggaagtgg attggcataa gagacttggc taagccctat
      481 cagagcgcta agcaaggtaa cagtagggag ctcttttgtg tgttttttat acagatgggt
      541 gaaactaaag tttggcatat caaaatttcc tcattaaaac ttttactttt cattcttaaa
      601 aaaatgctcc gtgtcataat atttaatttg attaaatgaa ataggaaaag attaaatttg
      661 tgaaaatatt ttgagtttct gtggttttac tgtggataaa tatccacagt attaattatt
      721 agtgagttgt attgtaaatt taggaaggtg gttatttatc agcctcttta tagactgcca
      781 aggcagctgc aaccgcatcg cctgaaggca cttttacttt atggcttaaa agtacggctt
      841 ctaacgcacc taaggttaaa agtacgttac gtttttggct tgagaaaccc atattaccga
      901 tacggattac ttttccatct aaggggccga atgaggtggc taattcaata ccgaagtggt
      961 ttaaaatatc actacgcaat gctgggccac tcataccttc tggaatgtgg aatgccgtta
     1021 caacgggggc tttatgtttg cgatcgccaa aaattttcaa acccattgct tctaaacctg
     1081 cacataatgc tttgtcgttt aaaatatggc gagcaaaacg agcttctaag ccttcttgta
     1141 aaataatgcg taacgcttcg tgtacaccat attgtgcaga agtggtttct gtgtggtgat
     1201 ttaaacggcg tgggctccag taatcttgta gctgtgccaa gtctaagtag ttacttggaa
     1261 ttggcggtaa tgtgccatct acatcagact ctgcacgaat gcctttttcc acacgtttac
     1321 gttttgcaat aatctcttca atccgtttgt tataagtgat taaagctgtg cctgatgggg
     1381 cggaaataca tttttgtgta ccgccgatac aagcatcaat gccccattca tccacacgaa
     1441 tatctacacc gcctaaggtt gcaacggtat ctacaattaa cattgcatca tattgtttac
     1501 agattttgcc gatctcttct aacggttgca tcatagaggt tgaggtttcg ccgtgaataa
     1561 tagcaactgc tttatagccg ccttttttca actctgcttc aatttcttct ggttcaaata
     1621 cggttcccca ctctctttcg ataatggtaa tatctgcacc gctacgagct aaaatttcat
     1681 ttaataaata accaaaacga ccaaatgcag gaattaacac tttatcgcct gggcaaatcg
     1741 ctgcggttag aacagtttct aagccaccac gagaggtgga gttgactaca taagtttgct
     1801 catttttggt ttggaataaa cggcgttcca tttccattgt ttcattcatt aatgaggtaa
     1861 actcagggtc aaattgccct aaaatgggtg cagacattgc acgcaaaaca cgtgggtcag
     1921 catctgttgg gccagggcac attaataaac gaggggaggg attaatttct ctgaattgca
     1981 taattatttc ct
//
LOCUS       DANLXD010000192         1821 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.193, whole genome shotgun sequence.
ACCESSION   DANLXD010000192 DANLXD010000000
VERSION     DANLXD010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.193"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(50..401)
                     /locus_tag="PXD18_002552"
                     /pseudo
     CDS             complement(50..401)
                     /locus_tag="PXD18_002552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596652.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(398..640)
                     /locus_tag="PXD18_002553"
     CDS             complement(398..640)
                     /locus_tag="PXD18_002553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6302923.1"
                     /translation="MYGINLNLNEKSSQTQNARILAHLQNGGRITSLSALDDFGCLRL
                     SARIKDLRDRGHDIQSVFITVPNGKKVKQYFMECAK"
     gene            complement(797..1030)
                     /locus_tag="PXD18_002554"
     CDS             complement(797..1030)
                     /locus_tag="PXD18_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cro/Cl family transcriptional regulator"
                     /protein_id="HDL6302924.1"
                     /translation="MEELKAYLNSLTTKEQESFALRCNTTVGYLRKSISRNSRLGAEI
                     CVAIERETKGLVTRKHLIEDWHLRWPELANDKQ"
     gene            1159..>1821
                     /locus_tag="PXD18_002555"
     CDS             1159..>1821
                     /locus_tag="PXD18_002555"
                     /inference="COORDINATES: protein motif:HMM:NF012920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6302925.1"
                     /translation="MNELRLLRQKKLKRLIDEVSEGNIADFARKIGKEPSYVARMLYP
                     SDKAGAKPIGEKMALHICHKFVLPLDWFNRDDDGEFIQINNGEEDNIILSVLNIQASA
                     GIGAKNGDVMEVIREIKFNPEQFYNLFRGITPEHIELISVKGDSMEPTFSHGDLLFVD
                     VTIQEYDGDGVYVFTCDDYIFVKRIQKTGRHFTILSDNDRYKPWQLDQEIYIHGKVKV
                     HQS"
BASE COUNT          577 a          333 c          330 g          581 t
ORIGIN      
        1 ttattatttg tcggatttaa atccgagctt tttcggatct gtttccgagc taactcggat
       61 ttatttccga gtgtcggatt taaatccgag ttaaactcat tccaagtctt ccctttttca
      121 gttaatcgaa taaggtcttt atctccgtgt ttttgataca cgatcaaccc ttttttgtga
      181 aactcgacaa aatggcgata gacggtatca ggctttgagt aaaacaaagg tagttcttcg
      241 atcaccgcat tacgggaaac ccagtaataa accacgccat caataatgat ttctttcgcc
      301 caagcaggag cttgattcag taaatcaaat aatgctcctt gattagcatt taagttccat
      361 tcaaggcatt ttgcattgtt gatgtaagtg ctaaatctca tttcgcacac tccataaaat
      421 actgcttcac tttcttgcca ttcggcactg taataaatac gctttgaata tcgtgaccac
      481 ggtcacgcaa atctttaatg cgagcggata aacgcaagca gccgaaatcg tctaacgcag
      541 aaagcgaagt aatacgaccg ccattttgaa gatgtgccaa aattcttgca ttttgggttt
      601 gacttgattt ttcgtttagg ttaagattta tcccatacat ataggaaacc tccttagtaa
      661 ttagccaccg ttacagcggt ggttttttta attgttaaaa acccaccacg caagcagcat
      721 aaaaattgcc actctaataa aaattgaatt tttactgtgg tagaatgatt tgagtttttt
      781 agaaaaaact ttccctttat tgcttgtcat ttgccaattc cggccagcgt aagtgccaat
      841 cttcaattaa atgctttcta gtaactaaac cttttgtttc acgctctatc gcaacgcaaa
      901 tttccgcacc taatcgagaa tttcttgaga tcgattttct taaataccca actgtcgtat
      961 tacaacgcaa ggcaaaactc tcttgctctt ttgtggttaa agaattgagg tatgctttta
     1021 attcttccat tgtgagtcct cttttaaaaa cgccaaaata ataccattag gtaaaaataa
     1081 tatcaatacc atttggtttg tttacctttt agtaaataag agtacaatta ctaaaaagta
     1141 atccttagag gaggttatat gaatgagttg agacttctta gacaaaaaaa attgaaacgc
     1201 ctaattgatg aagtgagtga gggaaatatt gctgactttg caagaaaaat aggtaaagag
     1261 cctagctatg tagcaagaat gttgtatccg tccgataaag ctggagctaa gcctattggt
     1321 gaaaaaatgg cactccatat ttgccataaa tttgtgctac cccttgattg gtttaatcga
     1381 gatgatgacg gcgaatttat tcaaatcaac aatggtgagg aagataatat catcttaagt
     1441 gtattgaata ttcaagcatc ggccggtata ggagcaaaaa acggtgatgt gatggaagtc
     1501 attagagaaa ttaaattcaa tccagaacaa ttttataacc tatttagagg tattacgcct
     1561 gaacatatcg agctgatcag tgtaaaaggc gattctatgg agccaacatt ctcacacggt
     1621 gatttgcttt ttgttgatgt aactatccaa gaatacgatg gcgatggtgt gtatgttttt
     1681 acttgcgatg actatatttt tgtaaaaagg attcaaaaaa caggcagaca ctttactatt
     1741 ttatctgata atgaccgcta taaaccttgg caattagatc aagaaattta tattcacggc
     1801 aaagttaaag tccaccaaag c
//
LOCUS       DANLXD010000193         1794 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.194, whole genome shotgun sequence.
ACCESSION   DANLXD010000193 DANLXD010000000
VERSION     DANLXD010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1794
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.194"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            2..77
                     /locus_tag="PXD18_002556"
     tRNA            2..77
                     /locus_tag="PXD18_002556"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:35..37,aa:Thr,seq:tgt)
     gene            112..196
                     /locus_tag="PXD18_002557"
     tRNA            112..196
                     /locus_tag="PXD18_002557"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:146..148,aa:Tyr,seq:gta)
     gene            240..314
                     /locus_tag="PXD18_002558"
     tRNA            240..314
                     /locus_tag="PXD18_002558"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:273..275,aa:Gly,seq:tcc)
     gene            318..393
                     /locus_tag="PXD18_002559"
     tRNA            318..393
                     /locus_tag="PXD18_002559"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:351..353,aa:Thr,seq:ggt)
     gene            509..1693
                     /gene="tuf"
                     /locus_tag="PXD18_002560"
     CDS             509..1693
                     /gene="tuf"
                     /locus_tag="PXD18_002560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDL6302926.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKHFGGAA
                     RAFDQIDNAPEEKARGITINTSHVEYDTATRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQ
                     YDFPGDDTPIVRGSALQALNGVAEWEEKILELANHLDTYIPEPERAIDKPFLLPIEDV
                     FSISGRGTVVTGRVERGIIRTGDEVEIVGIKDTAKTTVTGVEMFRKLLDEGRAGENVG
                     ALLRGTKREEIERGQVLAKPGSITPHTDFESEVYVLSKEEGGRHTPFFKGYRPQFYFR
                     TTDVTGTIELPEGVEMVMPGDNIKMTVSLIHPIAMDEGLRFAIREGGRTVGAGVVAKI
                     IK"
BASE COUNT          530 a          382 c          414 g          468 t
ORIGIN      
        1 cgccgactta gctcagtagg tagagcaact gacttgtaat cagtaggtca ccagttcgat
       61 tccggtagtc ggcaccatta actcaggcgt aaataagtat tcaattatcg tggaggggtt
      121 cccgagcggc caaagggggc agactgtaaa tctgttggct cagccttcga aggttcgaat
      181 ccttctccct ccaccatctc tgatattttg aatcgcgtag gtcagacgaa tttagaacag
      241 cgggcatcgt ataatggcta ttaccttagc cttccaagct aatgatgcgg gttcgattcc
      301 cgctgcccgc tccaagcgct gatatagctc agttggtaga gcgcaccctt ggtaagggtg
      361 aggtcggcgg ttcaaatccg cctatcagca ccacttctct gaattctatc tttctcacgc
      421 aaatttttat tggtattaat ttctacatta tggttaatgg gttcttttgt tccattgtaa
      481 ccgtttttgt ttaagaggct tttagaaaat gtctaaagaa aaatttgaac gtacaaaacc
      541 gcacgttaat gtgggtacaa tcggccacgt tgaccatggt aaaacaactt taacagcagc
      601 aatcactacc gtattagcaa aacacttcgg tggtgcagct cgtgcatttg accaaatcga
      661 taacgcgcca gaagaaaaag cgcgtggtat caccatcaac acttcacacg ttgagtacga
      721 tacagcaact cgtcactacg cacacgttga ctgcccggga cacgcggact atgttaaaaa
      781 catgattacc ggtgcggcac aaatggacgg cgctatctta gtagtagcag caactgacgg
      841 tccaatgcca caaactcgtg agcacatctt attaggtcgc caagtaggtg taccatacat
      901 catcgtattc ttaaacaaat gcgacatggt agatgacgaa gagttattag aattagttga
      961 gatggaagtg cgtgaacttc tttcacaata cgacttccca ggtgatgaca ctccaatcgt
     1021 acgtggttca gcgttacaag cgttaaacgg cgtagcagag tgggaagaga aaatccttga
     1081 attagcaaac cacttagaca catacattcc agagcctgag cgtgcgattg ataaaccatt
     1141 cttattacca atcgaagacg tattctcaat ttcaggtcgt ggtacagtag taacaggtcg
     1201 tgttgagcgt ggtatcatcc gcactggtga tgaagttgaa atcgtaggta tcaaagatac
     1261 agcgaaaaca accgtaacag gtgttgagat gttccgtaaa ttattagacg aaggtcgtgc
     1321 gggtgagaac gtaggtgcat tattacgtgg tactaaacgt gaagaaatcg aacgtggtca
     1381 agtattagcg aaaccgggtt caatcactcc acacacagac ttcgaatcag aagtttacgt
     1441 attatcaaaa gaagaaggtg gtcgtcacac tccattcttc aaaggttacc gtccacagtt
     1501 ctacttccgt acaacggacg taacaggtac aatcgaatta ccggaaggtg tagagatggt
     1561 aatgccgggc gacaacatca aaatgactgt tagcctaatt cacccaatcg cgatggacga
     1621 aggtttacgt tttgcgattc gtgaaggtgg tcgtacagta ggtgcgggcg ttgtagctaa
     1681 aatcatcaaa taattaagat tgtttgataa attgaaaagc taaataaaaa ctagaaagag
     1741 gcatatcgaa aggtatgcct cttttgcttt tatgccgatt aagctagcca tatc
//
LOCUS       DANLXD010000194         1770 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.195, whole genome shotgun sequence.
ACCESSION   DANLXD010000194 DANLXD010000000
VERSION     DANLXD010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.195"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..242
                     /locus_tag="PXD18_002561"
     CDS             <1..242
                     /locus_tag="PXD18_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302927.1"
                     /translation="DPEYVKYNYAGLWEKGSDGTFFCNYQQFMPEVEAKESLRKQEPE
                     LDDRYNEEEYSEEEYPDENDASDENDNYDETYNVF"
     gene            442..618
                     /locus_tag="PXD18_002562"
     CDS             442..618
                     /locus_tag="PXD18_002562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302928.1"
                     /translation="MATSSFDKRFVVKDPKAVKVLIEALQSPIKVVLPKKDLEKEEKE
                     ALCAIKKRLASMGL"
     gene            579..1130
                     /locus_tag="PXD18_002563"
     CDS             579..1130
                     /locus_tag="PXD18_002563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302929.1"
                     /translation="MCNQKTLSLYGLVKELGIEKTQLFLEQAFSCSRNKDVESFLLNK
                     AIRFETALAAATHLIINEQGDILAYFTLSFKEIEVEVSKSQLKKLTAGLSNDSHLRVL
                     LIGQIGKNEKVIDNPAKLPDILNHIYAQLYKAQRVLGGRVVILECENTPKLLELYKQN
                     KFQILNTIGSENGLKTLFFIPDF"
     gene            1200..1430
                     /locus_tag="PXD18_002564"
     CDS             1200..1430
                     /locus_tag="PXD18_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302930.1"
                     /translation="MSLLKKAQTFISIFNDVRTKNEAQRQSSNNLNVALKNAAEMRAE
                     MNGFSLKPQKRSTYFADHYGCGIHAVETYDNV"
     gene            1529..>1770
                     /locus_tag="PXD18_002565"
     CDS             1529..>1770
                     /locus_tag="PXD18_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011497995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6302931.1"
                     /translation="MFYSNNPLIKHKTGLLNLAEELGNISQACKVMGMSRDTSYRYQQ
                     AVEQSGVDALLNQNRRVPNLKNRVDEATEQAVVKFA"
BASE COUNT          651 a          291 c          328 g          500 t
ORIGIN      
        1 ctgatcctga atatgtaaaa tacaactacg ccggactttg ggaaaaaggc agcgatggca
       61 cttttttctg caattaccag caatttatgc ctgaagttga agctaaagaa tcactaagga
      121 aacaagaacc agaacttgat gatagatata acgaagagga atatagcgaa gaagaatatc
      181 ctgatgaaaa tgatgccagc gatgaaaacg ataactacga tgaaacttat aatgttttct
      241 agtatgtata tggaaaccgg aggaatccgt gattgaaaag gcttgcattt ccaaatatag
      301 tctatatatt gtggtaattg aaagtatttc tatgctaaca agcataaggc tatgtaatcg
      361 aaaaccaccc acaaggccta aatacagtat tattacagcc atgagtaacc atggtaattt
      421 aaatatttaa ggagttctat aatggcaaca tcatcatttg ataaacgctt tgtagtcaaa
      481 gatccaaaag ctgtcaaggt attaattgag gcattacaaa gcccaatcaa agtagtttta
      541 cctaaaaaag acttagaaaa agaagagaaa gaagcactat gtgcaatcaa aaaacgctta
      601 gcctctatgg gcttgtaaaa gaactaggta ttgaaaaaac acaactcttt ttggagcaag
      661 cattttcttg cagtagaaat aaagatgttg aaagttttct acttaataaa gcaatcagat
      721 ttgaaaccgc attagcagca gcaacacatt taatcattaa tgaacagggc gatattttgg
      781 cttactttac cctctctttt aaagaaattg aggtggaagt aagcaaaagc caattaaaaa
      841 agctaactgc tggtttaagt aatgattcac atttaagagt attgcttatc ggtcaaatcg
      901 gcaaaaatga aaaagtaatt gacaatccag ccaaattgcc agatattcta aatcatatct
      961 atgcacaact ttataaagca caacgagttt taggtgggcg agtcgttata ttagaatgtg
     1021 aaaatacgcc taaattatta gaactatata aacaaaataa atttcaaatt ctcaatacca
     1081 ttggaagtga gaatggtcta aaaacacttt tctttattcc tgatttttaa ctacagctaa
     1141 tatttcatta gaagaaagtc gccagctttg tcaggaagtc atatatggga gaaagaacaa
     1201 tgtctctact taaaaaagca caaacgttta tttctatttt taatgacgtg cgaactaaaa
     1261 atgaagctca acgccagtct tcaaacaatt taaatgttgc cttgaaaaat gctgctgaaa
     1321 tgagagctga gatgaatggg ttctccctta agcctcaaaa gcgttctact tactttgctg
     1381 accattatgg ttgtggtatt catgcagtag aaacctatga taatgtgtag aagatcagac
     1441 ttgatctgac aattcactct aaaaagtgag agtttcccgt ttagaatatg agtgtccaaa
     1501 ttcaatctaa acaaaaaagg aaactctcat gttttattct aacaaccctc tcattaaaca
     1561 caagaccggt ttattaaatt tagcagaaga actgggcaat atctctcaag cctgtaaggt
     1621 gatggggatg agtcgagata catcctatcg ctatcaacaa gcagttgagc aaagtggggt
     1681 ggatgcctta cttaatcaaa atcggcgtgt tcctaatcta aaaaatcgtg tggatgaggc
     1741 aacagagcaa gctgttgtga agtttgcatt
//
LOCUS       DANLXD010000195         1749 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.196, whole genome shotgun sequence.
ACCESSION   DANLXD010000195 DANLXD010000000
VERSION     DANLXD010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1749
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.196"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..1521
                     /locus_tag="PXD18_002566"
     CDS             <1..1521
                     /locus_tag="PXD18_002566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL6302932.1"
                     /translation="IQGNLVTAIPNFLEKVNNDFAISARNRDLYSHYLPYQGIDDWEN
                     SNFNFRTLNGVYYDDNLTSTELLRKFMIQRDYNTLYALSSARTGNADSLAKNYHLVVA
                     KMSYENLKKELSKKPDSTFNKLKKLYETNGEFLNEYILDNFRGNPLELLTVPALKESL
                     ENQESFPSRLYQKFNIFNQAIAQTTSNITKEEIDDLEKTVENFNNFKNSIDYDSDAWI
                     FNKEEYRTYMNDNVIPFMEKVEEFTETLKTLSRDDLSAEERTTKTIDSVKLRIYLNEQ
                     ARNRKNYINGFVPTDWIPEITDQMTKSKNLWLKYEEEAKTTLKPYQEETISRVIQDEI
                     NKKMAEIGTTTLEIGGKEHELEDLENQINALALTDEEKLAEDVENDLISKLDEAKAAL
                     AKNQQTLKEKRDELLGLNNKLDSSPLVKKGKNALAEGTNAFASGENAIAFGTDSQATG
                     NNAIALGANSKANAESAIAIGKGAQALKEKALALGENAIANRASAIAIGDNHSSKL"
     gene            complement(1570..>1749)
                     /locus_tag="PXD18_002567"
     CDS             complement(1570..>1749)
                     /locus_tag="PXD18_002567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HDL6302933.1"
                     /translation="RKKIYTDLTTLQADLDEWLMYYNHHRTHQGKMCCGRTPMATLLD
                     GKRIWVEKEFKLKLI"
BASE COUNT          658 a          302 c          299 g          490 t
ORIGIN      
        1 attcaaggta acttagtaac agccattcct aacttcctgg agaaagttaa taatgatttt
       61 gctataagtg ctagaaatag agacttatat agtcactacc ttccttatca gggtattgat
      121 gattgggaga attctaattt taactttcga acactaaatg gagtttatta tgatgataat
      181 ctaacttcaa cagaactcct gcgaaaattt atgattcaaa gagattataa cactctttat
      241 gctctaagtt ctgctcgcac aggaaatgct gatagtctgg ctaaaaatta ccatcttgta
      301 gttgcgaaaa tgtcctatga aaacctgaaa aaagaattat ccaagaaacc cgactctaca
      361 tttaataaac tgaaaaagct gtatgaaacc aatggtgaat tcttaaatga atatatttta
      421 gacaatttcc gaggaaatcc acttgaatta ttaacagtac ctgcgcttaa agaaagttta
      481 gaaaaccaag agtcattccc tagcaggctg tatcagaaat ttaatatttt caaccaggct
      541 attgcacaga ccacatcaaa cattactaaa gaagaaattg atgatttaga aaaaactgta
      601 gaaaatttca ataacttcaa aaattcaatt gattatgata gcgatgcgtg gatctttaat
      661 aaagaagaat atcgcactta tatgaatgat aatgtaattc cttttatgga gaaggtagag
      721 gaatttactg aaacattaaa aactttatct agagatgact taagtgcaga ggaacgtaca
      781 accaaaacaa ttgactccgt taaattaaga atatatctca atgaacaagc acgaaatcgt
      841 aaaaattata ttaatggatt tgtacctacc gattggattc ctgaaattac agatcaaatg
      901 acaaaatcca aaaatctatg gttaaaatat gaagaggaag ccaaaacaac attaaaacca
      961 taccaagaag aaacaatatc tagggttata caagatgaaa ttaataaaaa aatggctgaa
     1021 ataggtacta caacactaga gattggtggt aaagaacacg agctcgagga tcttgaaaac
     1081 caaattaatg ctttagcttt aactgatgaa gaaaaacttg cggaagatgt ggaaaatgat
     1141 ttaatctcaa agcttgatga ggctaaagca gccttagcaa aaaaccagca aacgctcaaa
     1201 gaaaagcgtg atgaattact agggctaaat aacaaattag atagctcacc acttgttaaa
     1261 aaaggtaaaa atgcacttgc agaaggcacg aatgcctttg cttctggtga aaatgccatc
     1321 gcattcggca cggattcaca agctacaggt aataacgcta tcgcactagg tgcaaattca
     1381 aaagcaaacg cagaaagtgc gattgcaatt ggtaaaggtg cacaagcatt aaaagaaaaa
     1441 gcccttgctt taggcgaaaa tgccattgcc aacagagcat ctgctattgc gattggtgat
     1501 aaccattcat ctaaattgta gaagatcaaa cctaatctga cagtcccccg ttttaaatta
     1561 ccgtgtctgt cagattaatt tgagcttaaa ttctttttcc acccaaatcc gttttccatc
     1621 aagtaaggtt gccatcggtg ttctgccaca gcacattttt ccttgatgtg ttcgatggtg
     1681 attataatac attaaccact catctaaatc cgcttgtaat gtcgttaaat ccgtataaat
     1741 tttcttcct
//
LOCUS       DANLXD010000196         1677 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.197, whole genome shotgun sequence.
ACCESSION   DANLXD010000196 DANLXD010000000
VERSION     DANLXD010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1677
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.197"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..1330
                     /locus_tag="PXD18_002568"
     CDS             <1..1330
                     /locus_tag="PXD18_002568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase/relaxase domain-containing protein"
                     /protein_id="HDL6302934.1"
                     /translation="VISSLMYAMSGHNDKAGLLSEIVQKADQHSVTLAIGGDVNKLVQ
                     RPVNSLPKQIVLALRYLLEQKIKLNTPKGPADGWFTEDGLWLVSKTAADNIRTYLLGQ
                     GISVPKDNPKLFDEMQSLGIVEESPSGGAIWSCRIQADSGWTPATTFTLLRVKPEVAW
                     ENINDRPAYFAGKVKVIEQITEEVNAEVQPPLVEETTKISLLPSKQSEAIIPSEETEI
                     SKAITSSDNATSAEVIINNENDLTSFVLDMFAPTETIEQNISVISSNKEQQIVMTTLT
                     EQEKVPPKKVKLEKSKKKNLQLTTLEPWNDMINPITGKEFVNWLKEGIATNKFAINKP
                     SAKLHIVDGNLFLVTPVIFEMYLQECGQPYDKETINNLQYDFQGLGLHSLKKTMTNGK
                     PDTINFWKCDVIGPRKTSSLTGYLIKNTHLLFGDKMLLNNHCLTLQEEDT"
     gene            1370..>1677
                     /locus_tag="PXD18_002569"
     CDS             1370..>1677
                     /locus_tag="PXD18_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase SAM-like domain-containing
                     protein"
                     /protein_id="HDL6302935.1"
                     /translation="MFFYRHYLRADTKRSYNNIIRIIKKRYPNLNANDVTTDMLIEWR
                     NQVVGNTIKAVTWNNYVRHLKALYNFAIAQGLLCMSSNPFNHLFIRESRRKKKTYSSE
                     "
BASE COUNT          578 a          278 c          340 g          481 t
ORIGIN      
        1 agtcatttct tcactgatgt atgcaatgtc tgggcataac gataaagccg ggcttttatc
       61 tgagatcgtg cagaaagccg atcagcatag tgttacgcta gcaatcggtg gcgatgtgaa
      121 taagctggta cagcgaccag ttaattcatt gccgaagcaa attgtgctgg ctctacgtta
      181 tttactggag cagaaaatca aattaaatac gccaaaagga ccagcagacg gctggtttac
      241 cgaagatggg ctgtggctgg taagtaaaac tgctgccgat aatatccgaa cttatttact
      301 gggacagggg atttccgtgc ctaaagataa tccaaaactg tttgatgaaa tgcaatctct
      361 tggtattgtg gaagagtctc cttccggcgg tgcaatttgg agctgccgta tccaagccga
      421 ttccggttgg acaccggcga caacatttac gctattacga gttaaaccgg aggttgcttg
      481 ggagaatatc aacgatagac cggcgtattt tgccggaaaa gtcaaagtga ttgaacagat
      541 aactgaagag gtcaatgcag aggttcagcc tccattagtt gaagaaacca ctaaaatttc
      601 tctattaccg agcaagcaat cggaggctat tattccgtct gaggaaacgg aaatatcgaa
      661 ggcaattaca agttcagaca atgcaacatc tgcggaagta atcataaata atgaaaatga
      721 tttaacttct tttgtattgg atatgtttgc tcctacagag acaattgagc aaaatatttc
      781 tgtcatttct tcaaataaag agcagcaaat cgtaatgaca acacttacgg aacaagaaaa
      841 agttccgccg aaaaaagtta aattagagaa aagtaagaaa aaaaatcttc aattaaccac
      901 tctagaacca tggaatgata tgattaatcc aattactgga aaagaattcg taaattggtt
      961 gaaggagggg atagcaacca ataaatttgc aattaacaaa ccttctgcaa aattacatat
     1021 agtagatggt aatttatttt tagtcacacc agttattttt gaaatgtatt tgcaagaatg
     1081 tggccaacct tatgataagg aaactataaa caatcttcag tatgatttcc aggggcttgg
     1141 tcttcattct cttaaaaaaa ccatgactaa tggtaagcca gatacaataa atttttggaa
     1201 gtgtgacgtg attggtccta gaaagacttc ctctttaaca ggatatttga taaaaaatac
     1261 tcatctctta tttggggata aaatgttact aaataaccac tgtttaactt tacaggaaga
     1321 ggacacataa tatggattct aagatttcct tcgatatatt attggaacga tttttttcta
     1381 tcgtcattat ttacgggcgg acacgaaacg aagttataac aatattattc gaattatcaa
     1441 aaagcgttat ccaaacttaa atgcgaatga tgtgactact gatatgttaa ttgaatggcg
     1501 taatcaagtt gttggtaata caattaaagc tgtgacgtgg aataattatg tgagacacct
     1561 aaaagcatta tataattttg cgatagcaca ggggctactt tgcatgagta gtaatccatt
     1621 taatcattta tttattagag aatctagaag aaaaaagaaa acttattcca gtgagca
//
LOCUS       DANLXD010000197         1663 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.198, whole genome shotgun sequence.
ACCESSION   DANLXD010000197 DANLXD010000000
VERSION     DANLXD010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.198"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..1642
                     /locus_tag="PXD18_002570"
     CDS             <1..1642
                     /locus_tag="PXD18_002570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HDL6302936.1"
                     /translation="DLNADTSQAFLNELDQTLWTAADKLRKNLDAANYKHIVLGFIFL
                     KYISDSFTDFQAKLKTQLTTPESELYLDPALFDEQEFSQILAEELEQRDYYAAENIFW
                     VPEQARWDNIKSLSKLNLGDELPWGDKFKGVSRLIDDAFEAIERENPKLKGVLQRIAG
                     FGVPDEMLTGLIDLFSRTNFTQPMHNGEPVHLQAKDILGHVYEYFLGQFALAEGKKGG
                     QYFTPKSIVTLIVEMLEPYSGRIYDPAMGSGGFFVQADRFIQAHAGNRNAISVYGQES
                     NSTTRKLAVMNMAIRGIPFDFGDKPEDTLLNPLHIDKKMDVVMANPPFNQKEWWNESL
                     ANDPRWAYGTPPQGNANFAWLQHMIYHLSPKGKMALLLANGSMSSQTSGEGDIRKNIV
                     QADLVEAMIALPNQLFTNTQIPACIWIINKAKARKGEVLFINATQIGYLKDRVLRDFT
                     ADDIAKISDTYHNWQKQNGYENIPAFCYCATLDEIAKNDFVLTAGRYVGAVQEENDGV
                     PFAEKMQELTALLNEQFKQGRELEQQIAENLKGLGYGI"
BASE COUNT          491 a          438 c          359 g          375 t
ORIGIN      
        1 tgatctcaac gctgacacaa gtcaagcctt tttaaacgaa ctcgaccaaa ccctctggac
       61 tgccgccgac aaactgcgta aaaacctcga tgccgccaac tacaaacaca tcgttcttgg
      121 ctttatcttc ctaaaataca tctccgacag ctttaccgat ttccaagcca agctaaaaac
      181 ccagcttacc acccccgaaa gcgaactcta tcttgaccct gcactatttg acgaacaaga
      241 atttagccaa attcttgccg aagagttgga acagagagat tactacgccg ctgaaaacat
      301 cttttgggtg ccggagcaag cccgctggga caacatcaaa tcattaagca aactcaatct
      361 tggcgatgaa ttgccttggg gagacaaatt taaaggtgtc agccgcttga ttgatgatgc
      421 ctttgaagcc atcgaacggg aaaaccccaa actcaaaggc gtactccaac gcattgccgg
      481 ctttggcgtg cctgatgaaa tgctcacagg cttaattgac ctgttctcac gcaccaattt
      541 cacccagcct atgcacaatg gcgaacctgt gcatctgcaa gccaaagaca ttttagggca
      601 cgtctatgaa tactttcttg ggcaatttgc ccttgccgaa ggcaaaaaag gcggtcaata
      661 cttcacgcca aaatccatcg ttaccctgat tgttgaaatg ctcgaaccct attcagggcg
      721 gatttacgac ccagctatgg gcagcggcgg cttttttgtg caagctgacc gctttattca
      781 ggctcacgca ggcaaccgca acgccatttc cgtttatggg caagaatcca actccaccac
      841 tcgcaaactg gcggtgatga atatggcgat tcgtggtatt ccctttgact ttggcgacaa
      901 gcccgaagat accctactaa accctttgca catcgacaaa aaaatggatg ttgtgatggc
      961 aaatccgccc tttaaccaaa aagagtggtg gaatgaaagc ctagcaaacg atccacgctg
     1021 ggcatacggc acaccgccgc aaggcaacgc caactttgcg tggttgcaac atatgattta
     1081 ccacctctcc cccaaaggca aaatggcact cctgctcgcc aacggctcaa tgagcagcca
     1141 aacttcaggc gaaggcgaca ttcgcaaaaa catcgtgcaa gctgaccttg tcgaagcgat
     1201 gattgccctg cccaatcagc tattcaccaa cacccaaatc cctgcctgca tttggattat
     1261 caataaagcc aaagccagaa aaggtgaagt gctgtttatc aacgccaccc aaataggcta
     1321 cctgaaggac cgcgtcttgc gtgattttac cgctgatgac atcgccaaaa tcagcgacac
     1381 ctaccacaac tggcaaaaac agaacggcta cgaaaatatc cctgcgtttt gttattgtgc
     1441 cacgctggac gaaatcgcca aaaacgattt tgtgctgacc gcagggcgat atgtcggtgc
     1501 ggtacaagaa gaaaatgacg gcgtgccgtt tgcagaaaaa atgcaggaat tgaccgcttt
     1561 attgaatgaa caatttaaac aagggcggga attggaacag caaatcgcag agaatttaaa
     1621 ggggttggga tatggcattt aatcagtatg tattttcaga tat
//
LOCUS       DANLXD010000198         1652 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.199, whole genome shotgun sequence.
ACCESSION   DANLXD010000198 DANLXD010000000
VERSION     DANLXD010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1652
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.199"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(61..477)
                     /gene="tnpA"
                     /locus_tag="PXD18_002571"
     CDS             complement(61..477)
                     /gene="tnpA"
                     /locus_tag="PXD18_002571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005720092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HDL6302937.1"
                     /translation="MKKETEIRRGRHVVFNLHVHLVFVTKYRREVFTQAILNDLHSIF
                     ATICADFEATLVEFDGEDDHVHLLVEYPPKVAISHLVNSLKGVSSRMIRKKNYPSIRK
                     KLWGNQLWSPSYFAGSCGGAPISIIRQYIEQQQTPD"
     gene            524..>1652
                     /locus_tag="PXD18_002572"
     CDS             524..>1652
                     /locus_tag="PXD18_002572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6302938.1"
                     /translation="MLLRKAFKFEIRPNGEQVRKMKQFCGCSRFVFNKALAWQNEQYE
                     QDNHHKFSYTKLANLLPQWKKELVWLKDCHSQVLQQSLKDLESAFKNFFQKRADLPKF
                     KKKGVKESFRFPQGCKIEQKNDRLYLPKIGWVRYRNSREIVGEVKNVTVSMKCGRFFV
                     SIQTEFKQEIPTHKGGEIGIDMGIARFATLSNGEFFEPLNAFKTHKGKLAKLQKQLKN
                     KVKFSKNWQKLKDKIGKLHHKIANCRKDFLHKISTQISKNHAMIYVEDLQVANMSKSA
                     KGTAEVHGKNVKQKSGLNRVILDQSWFEFRRQLDYKTQWLGGFLLAVPPQNTSRTCPC
                     CNYTAKENRQTQENFECVECGYTENADVVGAMNVLTRGQAIV"
BASE COUNT          564 a          318 c          340 g          430 t
ORIGIN      
        1 accacgtcct ttagggcgtg gatataaggt ataaacggca aagccgtttc aaatttctaa
       61 ctaatcaggt gtttgttgtt gctcgatata ttggcgaata atcgatattg gtgcaccacc
      121 acaactacca gcaaagtaag acggtgacca aagttgattt ccccataatt ttttgcgaat
      181 gctcggatag tttttctttc taatcattcg gctcgaaacg ccttttaaac tgtttacaag
      241 atgagaaata gcgactttag gcggatattc cacaagtaga tgaacgtgat catcttcacc
      301 atcaaattcc actaatgtgg cttcaaaatc agcacaaatc gttgcaaaaa ttgagtgtaa
      361 gtcgttcaaa attgcttgag taaaaacttc cctgcgatat ttagtcacga aaactaaatg
      421 aacgtgtaag ttaaaaacaa cgtggcgacc acgtctaatc tctgtttctt ttttcatagg
      481 ccaagtgtag aataagcaca atttttgtat tctaattcgt gcaatgttac tacgtaaagc
      541 ctttaaattt gaaatcagac caaatgggga acaagttcgc aaaatgaagc agttttgcgg
      601 ctgttctcgc tttgtgttta acaaggcatt ggcgtggcaa aatgagcagt acgaacaaga
      661 taaccatcac aaattcagtt ataccaagct cgccaacttg cttccgcaat ggaaaaaaga
      721 attggtatgg cttaaagatt gccattcaca agtgcttcaa cagtcgttaa aagaccttga
      781 aagtgcgttt aaaaacttct ttcaaaagcg tgcggatttg cccaaattca agaaaaaagg
      841 cgtaaaagag agtttccgtt ttccgcaagg ttgcaaaatc gagcagaaaa acgaccgctt
      901 gtatctgccg aaaatcggtt gggtgcgtta tcgcaacagt cgtgaaattg ttggggaagt
      961 aaaaaatgtc accgtttcaa tgaaatgcgg acgctttttt gtgagcattc aaacggaatt
     1021 taaacaggaa attcccacgc ataaaggcgg agaaatcggc attgatatgg gcattgctcg
     1081 ttttgcaacc ctttccaatg gagaattttt tgagccgtta aatgcgttta aaacccacaa
     1141 aggaaaattg gcaaaactgc aaaaacagct aaaaaataaa gtgaagttca gtaaaaactg
     1201 gcaaaaactg aaagataaaa tcggcaagtt acatcacaaa atcgccaact gccgaaaaga
     1261 tttcctgcat aaaatctcaa cgcaaatcag caaaaaccac gcgatgatct atgttgaaga
     1321 tttgcaagtg gcgaatatgt ccaaatcagc caaaggcaca gcggaagtac acggcaaaaa
     1381 tgtgaaacag aaatcaggct taaaccgagt gatattagac cagtcttggt ttgaatttag
     1441 acgacaactg gactacaaaa cgcaatggtt aggcggattt ttgctagcag ttcctccaca
     1501 aaataccagt cgtacttgcc cttgttgcaa ctatacagca aaagaaaatc gccaaacaca
     1561 ggaaaatttt gaatgcgtag aatgtggcta tacggaaaat gccgatgtag tgggagcaat
     1621 gaatgttctt acacgtgggc aagcaatagt cc
//
LOCUS       DANLXD010000199         1590 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.200, whole genome shotgun sequence.
ACCESSION   DANLXD010000199 DANLXD010000000
VERSION     DANLXD010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.200"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            31..1332
                     /locus_tag="PXD18_002573"
     CDS             31..1332
                     /locus_tag="PXD18_002573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL6302939.1"
                     /translation="MWVRLGDICLKITDGTHHSPPNIDKSDFLYITAKNIKKDGLDLS
                     KISYVTKEIHNEIFSRCNPEKGDILYIKDGATTGVSIINTLNEPFSMLSSVALIKTSQ
                     EIDNEYLNYVMNSHYFYNISIGSMSGTGIPRITLTKLESYLVPVPPLLEQQRIVQKIE
                     ELLPLVERYEQTEQQLTKLNNTFPEQLKKSVLHAAIQGKLTEQDPNDELASCLIERIK
                     AEKNRLIAEKKLKKPKSVSEIVMRDNLPYEIKAGQERCIADEVPFEIPQNWTWVRLGE
                     VGDWSSGATPNRHNPEYYNGTIPWLKTGDLNNGIISSIPEFITDKALQECSVRLNPVG
                     SVLIAMYGATIGKLGILKIAATTNQACCACIPFNGIYNKFLFYYLMSQKAEFQKKSEG
                     SGQPNISKEKIINYLFPLPPIHEQHRIVQKIEQLFAEIEKL"
BASE COUNT          570 a          264 c          291 g          465 t
ORIGIN      
        1 gaaccacctt ttgagattcc tgagagttgg gtgtgggtga ggttggggga tatatgccta
       61 aaaattacag atggaactca tcattctccc ccaaatatcg ataagagtga ttttctttat
      121 attacagcta aaaatataaa gaaagatgga ttagatttat caaaaattag ctatgtaaca
      181 aaagaaattc ataatgaaat tttcagccgt tgtaatcctg aaaagggaga tattctatat
      241 attaaagatg gagccacaac tggagtaagt attataaata ctcttaatga gccatttagt
      301 atgttatcca gtgttgcctt aattaagacc tcacaagaaa tagataatga gtacttaaat
      361 tatgtaatga atagtcatta tttttataac atttctattg gaagtatgtc tggaacaggt
      421 attccaagaa taacattaac taaattagaa tcttatttag tcccagttcc gccactccta
      481 gaacaacagc gcattgtgca aaaaatcgag gaattattac cgcttgttga acgctacgag
      541 caaaccgaac agcaactcac taaactcaac aatacattcc ccgaacagct gaaaaaatcg
      601 gtgttacacg cagctattca gggtaaatta accgagcaag atccgaatga tgaactggca
      661 tcttgcctga ttgagcggat aaaagcggag aaaaatcgtc ttattgccga gaaaaaactc
      721 aaaaaaccaa aaagtgtttc agagattgta atgcgtgata atttacctta tgagatcaaa
      781 gcaggtcagg aacggtgtat cgccgatgaa gtgccatttg agattcctca aaattggact
      841 tgggtgaggt tgggggaagt aggtgattgg agttcaggtg caactccaaa ccgacacaat
      901 cctgaatact ataatggtac gatcccgtgg ctaaaaacag gagacttaaa caacggaata
      961 atttcatcta tacctgaatt tattacagat aaagcattgc aggaatgttc tgtaagatta
     1021 aatcctgttg gttcagtttt gatagcaatg tatggagcga caattggtaa gcttgggata
     1081 ttaaaaatag cagcaacaac aaatcaggct tgctgtgcgt gtattccttt taatggaatt
     1141 tataataaat tcttatttta ttatttgatg tcgcagaaag cagaatttca gaaaaaaagt
     1201 gagggaagtg ggcaaccaaa tatatcaaag gaaaaaatta tcaattattt atttccttta
     1261 ccaccaatcc acgaacaaca tcgcattgtt caaaaaattg aacaattatt tgcagagatt
     1321 gaaaaattgt aggagtcatc atcgctttct tgggcgtgtt ggatacgccc tacagtcact
     1381 aaattattga tcttttatca tatcggtttt caaccaacct aaaaggaaac ctatatgatc
     1441 catctatttg aaaagcacct taatcaatct aatcttgctg aaaataccca atcagcttat
     1501 ctttttgcgg taaaacaata tcacaaaaaa tttgatcagt tatctaaaat caatttacag
     1561 cgatataagg tattcttaat tgaaaactat
//
LOCUS       DANLXD010000200         1539 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.201, whole genome shotgun sequence.
ACCESSION   DANLXD010000200 DANLXD010000000
VERSION     DANLXD010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.201"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..117
                     /locus_tag="PXD18_002574"
     CDS             <1..117
                     /locus_tag="PXD18_002574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMP-N-acetylneuraminate-beta-galactosamide-
                     alpha-2, 3-sialyltransferase"
                     /protein_id="HDL6302940.1"
                     /translation="KSNHIEVVALRVNVDNPAYIESYELLEKLGVQIVDIRE"
     gene            119..904
                     /locus_tag="PXD18_002575"
     CDS             119..904
                     /locus_tag="PXD18_002575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HDL6302941.1"
                     /translation="MKKYLISLEKDVKRRELFFSQPNTEDFEVFSAINTMSSDWEALN
                     NHFDLALFEQRYGRKTTKGEVGCTLSHLAVYQKIAEDSTIAEDDYCLVCEDDALFADD
                     FQKHLDALLAQNLKVDIILVGQSKIPTFNDSELELNYPSTFGFLQKNIPNSQYKYAYS
                     YLNYFAGTVAYLIKKSTACQFLAQCAGKNPYWLADDFILFEKNFKFDVLIVRPLMAIE
                     NPVLISNLEDLRGSLNNNLFKKAVKYPLKKLLAIKRNFTQRNS"
     gene            915..>1539
                     /locus_tag="PXD18_002576"
     CDS             915..>1539
                     /locus_tag="PXD18_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302942.1"
                     /translation="MSALINLFYLYDPWFFHFLRMSFVVGLVACGYLVFQIIKGKSNG
                     IIIPKDSLIAIIALIGFSIIPLLINSTKEIGVLAMYVKMLILFVFGIAIYNVFYHNQQ
                     GKTLFVRDLKIGIAIQWICGVTALLGLPFMVDFLLSSNAMMPRFFGSEQEYRLYNITS
                     SAFFQLSIFYLMLLHFLLAYNKKTDVVNEWFLFLLLCVGLISGRTFLL"
BASE COUNT          481 a          216 c          282 g          560 t
ORIGIN      
        1 aaaagtaacc atattgaagt ggtagcatta agagtgaatg tagataatcc tgcttatatt
       61 gagagctatg aattgcttga aaaattaggc gttcagattg ttgatattag agaataaaat
      121 gaagaaatat ttaatttcat tagaaaaaga tgtaaaaaga cgagagctat tttttagcca
      181 gcctaatacg gaagattttg aggtgttcag tgccattaat acaatgagta gtgattggga
      241 ggcattaaat aaccattttg atttggctct gtttgaacag cgatatgggc gtaaaaccac
      301 taagggcgaa gtaggttgta ctttaagcca tttagccgtt taccaaaaaa ttgccgaaga
      361 tagcactatt gcggaagatg attactgcct agtctgtgaa gatgatgcct tatttgccga
      421 tgatttccaa aaacatcttg atgctttatt agcacaaaat ttaaaagtcg atattatttt
      481 agttgggcag tcgaaaattc caacttttaa cgatagcgaa ttagagctta attacccatc
      541 aacctttggc tttttgcaaa aaaatattcc gaatagccaa tataaatatg cttattctta
      601 cctgaattat tttgctggta cggttgcata tttaattaaa aaatcgaccg cttgtcagtt
      661 tttagcacaa tgtgccggaa aaaatccata ctggcttgcc gatgatttta ttttatttga
      721 aaagaatttc aaatttgatg tgttaattgt ccgcccgtta atggcgatag aaaatcctgt
      781 tctaattagt aatttggaag atttacgtgg ttcattaaat aataatttat ttaaaaaagc
      841 cgtaaaatat ccacttaaaa aattactggc aattaaacgt aattttactc agcgaaattc
      901 ataataggtc tgaaatgtca gcactcatta acttatttta tctttacgat ccgtggtttt
      961 tccatttttt aagaatgtcg tttgtagtcg ggcttgttgc ttgtggctat ttggttttcc
     1021 aaataatcaa gggcaaatcg aatggcatta ttattcctaa agatagcctg attgcaatta
     1081 ttgcattaat cggctttagc attattccat tattgattaa cagtacaaaa gaaattggtg
     1141 tgctggcaat gtatgtcaaa atgctgattt tgtttgtgtt cgggattgcg atttataatg
     1201 ttttttatca taaccaacaa ggtaaaactt tattcgttcg tgatttaaaa atcggcattg
     1261 ctattcaatg gatttgtggt gtgacagcct tattaggttt gccgtttatg gtggattttt
     1321 tattatccag caatgcaatg atgccacgtt tttttggttc ggaacaagaa taccgtttat
     1381 ataacatcac ttcttccgcc tttttccaat taagcatttt ttatttaatg ctattacatt
     1441 ttttattggc atataataaa aaaacagatg tggtgaatga gtggttttta tttttattat
     1501 tatgtgttgg tttaatttcc ggtagaacct ttttattaa
//
LOCUS       DANLXD010000201         1482 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.202, whole genome shotgun sequence.
ACCESSION   DANLXD010000201 DANLXD010000000
VERSION     DANLXD010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1482)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1482)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1482
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.202"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..935)
                     /locus_tag="PXD18_002577"
     CDS             complement(<1..935)
                     /locus_tag="PXD18_002577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015483985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6302943.1"
                     /translation="MKQVMNPINTPTQRFKDGNPATGEYGTIVTAEFLNNVQDSVINT
                     QQELHSVLAEAGIEANDEQVNQVAKAIKKIAGDATRDNFNALANPDGYKHIGRCKSVA
                     ELRTIRPTEHGQRILVDAYYEDGTTGGGEFVADLQDLVTPDDGGVCFVVNNNGGRWKR
                     VDLSHLTLFDFWAVGDGVTNDESAFVNAMRYSQFFIENGTFRINNAVNSVRDNVKILG
                     NKTGKLVLGAGIQQAGAEVFNINHSNYFISGFCIETPNKAIGIRFKSLDDAGVKNLHI
                     DNVVFNGTFYGVRAGESIQADTNYPTDNVIVQNCQS"
     gene            complement(932..>1482)
                     /locus_tag="PXD18_002578"
     CDS             complement(932..>1482)
                     /locus_tag="PXD18_002578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2313 domain-containing protein"
                     /protein_id="HDL6302944.1"
                     /translation="LLPPVSYDPNGRWLALSLEVEGRELDRIDARAKTLIDAVDVSTG
                     IFIDDWERVCGLTANSSLPLETRIERVIAKLNQLGGLSIGYITQVAKELGYCIKISEP
                     QPFIAGLSRAGDMLWHKDIMWTFFVDICNPTDDYKRFRASVSMAGDALMGRYKDPILE
                     SLLEEVKPAFSRVWVRYLGDIE"
BASE COUNT          424 a          373 c          260 g          425 t
ORIGIN      
        1 gattggcagt tttgtacaat cacattatca gttgggtaat tagtatccgc ctgaatactt
       61 tcacctgccc tgaccccgta gaaggtgcca ttaaacacaa cattgtcaat atggagattt
      121 ttaacaccag catcatccaa agacttaaat cgaataccaa ttgctttgtt cggtgtttca
      181 atacaaaaac ccgagataaa ataattgctg tgattaatat taaaaacttc ggcccctgct
      241 tgctggatac ctgcacctaa tactaatttg ccggtcttat tgcccaaaat tttcacatta
      301 tcgcgaacag aattaacggc attgttgata cgaaatgtac cgttttcgat aaaaaattga
      361 gaatatctca tagcatttac aaatgctgat tcatcatttg ttaccccgtc accgacggcc
      421 caaaaatcaa ataatgtaag atgtgaaagg tcaacacgct tccaccgccc cccattatta
      481 ttcacaacaa aacaaacccc accatcatca ggcgtaacta aatcctgcaa atcagccaca
      541 aactccccac cgcctgttgt gccgtcctca tagtaagcat ccaccaaaat acgctgaccg
      601 tgttccgttg ggcggatagt acgtaactcc gcaaccgatt tgcagcgacc gatgtgtttg
      661 taaccatcag ggttggctaa tgcgttaaaa ttatcacgag tagcatcgcc cgcaattttc
      721 ttgattgctt tagccacctg attaacttgt tcgtcatttg cttcgattcc tgcttcagca
      781 agtacactgt gcaattcttg ttgggtgtta atgaccgaat cttggacgtt attcaaaaat
      841 tcagcagtca caatcgtgcc atattcacca gtggcagggt tgccatcttt aaaacgctgt
      901 gttggggtat taatcggatt catcacttgt ttcattcaat atctcctaaa tatcttaccc
      961 acacacggct aaatgcaggt tttacctctt caagtagact ttctaaaatt gggtctttgt
     1021 atcgtcccat taacgcatcg ccagccattg acacacttgc tctaaaacgc ttgtaatcat
     1081 ctgtggggtt gcaaatatcc acaaaaaatg tccacataat gtctttatgc cataacatat
     1141 ccccagctcg gcttagccca gcaataaagg gttgtggctc actaattttg atgcaatatc
     1201 caagctcttt ggccacttga gtgatatagc ctatcgacaa tccacccaac tgattcagct
     1261 ttgcaatcac acgctcaatt cgggtttcaa gcggtagtga gctattcgcc gttaagccac
     1321 aaacccgctc ccaatcatca ataaaaatgc ctgttgatac atcaacggca tcgattaaag
     1381 tcttggctct cgcatcaatg cggtctagct ctctcccctc aacttcaagg gataacgcta
     1441 gccatctgcc gtttgggtca tacgatacag gcggtaataa ac
//
LOCUS       DANLXD010000202         1465 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.203, whole genome shotgun sequence.
ACCESSION   DANLXD010000202 DANLXD010000000
VERSION     DANLXD010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1465
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.203"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..973)
                     /locus_tag="PXD18_002579"
     CDS             complement(<1..973)
                     /locus_tag="PXD18_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL6302945.1"
                     /translation="MKVYLIADLLTSKALALENLSIKEEFFFLRKKNQPILFVESAWQ
                     GYKNRWKYKIASYPDHLKRTNQKLLRLVEKAKDKGIPTVFWNKEDSVHFDRFIDSAKH
                     FDHIFTVDQNAIARYREVVPDTTTVNVGMFPVQPRIHNFQGFNFKHLAANFVGSYSHH
                     IHNKRRERQDMLFGAALKAGLPVTIFDRNSDRKSENYSYPKNSFNLNVQPAVSYTETA
                     NIYRDYLVSLNINTVEDSPTMFSRRVVEILACGGILVSTPSMAIDNIFKEYCHIVQSE
                     DEAIELFQRLKRGASRDDLNKAIAGSEFVLSNFTWEHFLSQIQKVVYR"
     gene            complement(976..>1465)
                     /locus_tag="PXD18_002580"
     CDS             complement(976..>1465)
                     /locus_tag="PXD18_002580"
                     /inference="COORDINATES: protein motif:HMM:NF012360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302946.1"
                     /translation="MVFFKRKYKKADFLYRLNHILHSSSIPYQAIIGKNSVFAYGGIG
                     CIIHNATKIGARCVIDSNVTIGGAKSGIPYIDDDVYISMGAKILGSINIGDGAIIGAN
                     AVVNRDVLPFTVVAGSPAKIIGEVTASNFDKYSGFYWCKNNNNSSQKFCEWYKAIGKL
                     KE"
BASE COUNT          473 a          283 c          226 g          483 t
ORIGIN      
        1 acctatatac aactttctgt atttgggata agaaatgttc ccaagtaaag ttactcaata
       61 caaattcaga gcctgcaatc gctttattca aatcatcacg agaagcacct cgttttaaac
      121 gttggaataa ttctatagcc tcatcttcac tttgtacgat atgacaatat tctttaaata
      181 tattgtcgat agccatactt ggtgtagaga ctaatattcc tccacaagct aatatttcaa
      241 cgactctgcg agaaaacatc gtaggggaat cttcgacagt attaatattc aaagaaacaa
      301 gataatcacg ataaatatta gcagtttcag tataactaac agcaggttga acatttaaat
      361 taaagctatt ttttgggtaa ctataatttt ccgattttct atcagagttt ctatcaaaga
      421 tggttaccgg aagacctgct ttaagtgctg caccaaacaa catatcctgt ctttctctac
      481 gcttattgtg gatatgatga ctgtaactcc ctacaaaatt tgcggcaagg tgcttaaaat
      541 taaatccttg aaaattatga atccttggct gaacaggaaa catacctaca ttgacagtgg
      601 ttgtatcagg tacaacctct ctataacgag caatagcatt ttgatctaca gtaaatatat
      661 gatcaaaatg cttcgctgaa tcaataaatc ggtcgaaatg tacggaatct tccttgttcc
      721 aaaataccgt tggaatacct ttatcttttg ctttttccac caaacgcaac aatttttgat
      781 tggttcgttt gaggtggtca ggataagatg ctattttgta tttccaacgg tttttgtagc
      841 cttgccaagc ggattctaca aatagaattg gttgattttt ttttcgtaga aaaaaaaact
      901 cctcttttat agaaagattt tctaatgcca gagccttgct tgtgagaaga tctgctataa
      961 gataaacttt catccctatt cctttaattt gcctatagcc ttgtaccatt cacaaaattt
     1021 ttgggaggag ttattattat ttttgcacca ataaaaccca gaatatttgt caaagtttga
     1081 tgctgtaact tccccaataa tttttgcagg agagcctgca accacggtaa atggtaaaac
     1141 atctctattt acaacagcat ttgcccctat gatcgcacca tctccaatat ttatactacc
     1201 taagatctta gctcccatag atatgtacac gtcatcatcg atatagggaa tgccactttt
     1261 agcaccacca atggtaacat tagagtcaat tacgcatctt gcaccaattt tagtagcatt
     1321 atgtataatg cagcctatac caccataagc aaatacacta tttttaccaa taattgcctg
     1381 atatggaata gacgaactat gtagaatatg atttagcctg tagagaaaat cagctttttt
     1441 atatttcctt ttaaaaaata ccatc
//
LOCUS       DANLXD010000203         1441 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.204, whole genome shotgun sequence.
ACCESSION   DANLXD010000203 DANLXD010000000
VERSION     DANLXD010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.204"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..>1441)
                     /locus_tag="PXD18_002581"
     CDS             complement(<1..>1441)
                     /locus_tag="PXD18_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDL6302947.1"
                     /translation="DENCKGVNIIIDIFSGTGAVSNTFKDKMLITNDLLYSNYISNYA
                     WFGYEKYSDKKIIELIYEYNQIKTKENNYMRENFADTFFSADDCSKIGYIREDIETKY
                     KSNEINFKEYAILITSLLYAMDKIANTVGHYDAYRKNVNFEKTLVLNVLLPEKNINSN
                     NVCYNLDANELIKSIKGDLLYLDPPYNSRQYCDAYHLLENVARWEKPKVYGVARKMDR
                     TSLKSDYCMIAATKAFEELIENADAKYILLSYNNMSDKGNDRSNAKISDEDIMKILSK
                     KGKVIVFESDYKSFSTGKSDIQDNKERLFLCEVFSKEKKKMNISCPFNYIGGKFKLLE
                     QLQPLFNEKEVFLDLFAGGGNVGINSSSSKVIFNDTNENLIDLIEFIKDTDTDALLKQ
                     IDNIIEAYNLSNTSLYGYSYYDCDSSRGLAEYNKGRFLKLRDDFNAKVLAGEIDYPML
                     YVLMVFSFNNQIRFNRKGLFNLPVGKRDF"
BASE COUNT          481 a          255 c          147 g          558 t
ORIGIN      
        1 ttaaaatctc tcttacctac cggaagatta aaaagtccct ttctattaaa cctaatctga
       61 ttattaaaag agaacaccat aagtacataa agcattggat aatctatttc tccagcaaga
      121 actttagcgt taaaatcatc tcttaacttg agaaatcttc ctttattgta ttcggctaag
      181 cctctactac tatcacaatc ataataagaa tacccatata atgatgtatt ggataaatta
      241 tacgcctcaa taatattgtc tatttgtttt aataaagcat cagtatcagt gtcttttata
      301 aattcaatta aatctatcaa attttcattc gtatcattaa aaataacttt tgaagaagag
      361 gaatttatcc caacattccc tccaccagca aataaatcta aaaatacttc cttttcatta
      421 aataaaggtt gtaattgttc caatagttta aattttccgc caatataatt aaaagggcaa
      481 gatatattca ttttcttttt ttctttgcta aatacttcgc ataaaaataa tctttcttta
      541 ttatcttgta tatctgattt cccagttgaa aaactcttat aatccgattc aaatacaatt
      601 acttttccct ttttgctaag aattttcata atatcttcat ccgatatttt cgcattggat
      661 ctatcatttc ccttgtctga catattgtta tatgaaagca aaatatattt tgcatcagca
      721 ttttcaataa gctcctcaaa tgcttttgta gctgcaatca tacaataatc acttttaagc
      781 gaagttctat ccatctttct tgcaacacca taaactttag gtttttccca tcgtgccaca
      841 ttttcaagta aatgatatgc atcacaatat tgtcttgaat tatatggagg gtctaaatac
      901 aataaatctc ctttaatact tttaattaat tcatttgcat ctaagttata acaaacatta
      961 ttagagttaa tatttttttc aggtagtaaa acattcaata ctaaagtttt ttcaaagttg
     1021 acattctttc tatatgcatc gtaatgtcca accgtatttg caatcttatc cattgcatat
     1081 aacaaggatg taatcaaaat cgcatattcc ttaaaattta tttcattgct tttatatttt
     1141 gtctcaatat cttctcttat atatcctatt ttgctgcaat catcagcaga aaaaaaagta
     1201 tctgcaaaat tctctcgcat atagttattt tcttttgttt ttatttgatt gtattcatat
     1261 ataagttcaa ttattttttt atctgagtat ttctcatacc caaaccacgc atagttggaa
     1321 atgtaattgc tatacaacaa gtcatttgta ataagcattt tatccttaaa agtattagag
     1381 actgctccag ttccactaaa tatgtcaatg ataatattta cacccttgca attttcgtca
     1441 a
//
LOCUS       DANLXD010000204         1376 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.205, whole genome shotgun sequence.
ACCESSION   DANLXD010000204 DANLXD010000000
VERSION     DANLXD010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1376
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.205"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..1280
                     /locus_tag="PXD18_002582"
     CDS             <1..1280
                     /locus_tag="PXD18_002582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HDL6302948.1"
                     /translation="LGVLTSLLSISGSNQAFANWAQKKVKGKRGAKLMAAGLVFFTFI
                     DDYFHSLAVGAIARPVTDKFRVSRAKLAYILDSTAAPMCVLMPISSWGAYIITLIAGL
                     LATHSITGYSPLGAFMTMSAMNFYAIFAMIMVFFVAYFSFDIGSMARFERQAAHLAEL
                     DDEQIETKGHVRDLILPIIALIVATVSMMMKTGADALAESGASFSILGAFENTTVGIS
                     LVVGGVAGLIVATICIITSGNISFKNYVRAYGLGVKMMSGAITILFFAWTINGVVSDM
                     QTGKYLSGLVAESIGAEFLPAILFVLAAAMAFSTGTSWGTFGIMLPIGASMAVHSDPA
                     LIIPCLSAVMAGAVCGDHCSPVSDTTILSSTGAQCNHMDHVISQLPYALLVATASIIG
                     YLVVGFTQSAVLGFIATAVVMAILILLFKEKKH"
BASE COUNT          366 a          233 c          309 g          468 t
ORIGIN      
        1 tattaggggt attaacgtca ttattaagta tttcaggtag taatcaggcg tttgcgaatt
       61 gggcgcagaa aaaggtaaaa ggcaaacgag gcgcaaaatt aatggcggca ggtttggttt
      121 tctttacctt tattgatgac tatttccaca gtttagcagt aggtgcgatt gcccgccctg
      181 ttacggataa attccgtgtt tctcgtgcta aattagctta tattttagat tctaccgccg
      241 ctccaatgtg cgtgttaatg ccaatttcaa gctggggggc ttatattatt accttaatag
      301 ctggcttatt ggctacgcat tccatcacag gctattcgcc actaggcgca tttatgacaa
      361 tgagcgcaat gaacttttac gccatttttg cgatgattat ggtgttcttt gtggcatatt
      421 tctcatttga tattggttcg atggcgcgtt ttgaacgtca agcagcgcat ttagcagaat
      481 tagatgatga gcaaattgaa acgaaaggac acgtgcgcga tttgattttg ccaattattg
      541 cacttattgt tgctacagtc tcaatgatga tgaaaacagg tgcagatgca ctggccgaat
      601 caggtgcttc attttctata ctaggtgctt ttgaaaatac tacggtaggc atttcattag
      661 ttgttggtgg tgtggcaggg cttatagttg caactatttg tatcattaca agcggtaata
      721 tttcttttaa aaattacgtc cgtgcttatg gcttaggtgt gaagatgatg tctggtgcaa
      781 tcactattct cttctttgcg tggacaataa acggcgtagt aagtgatatg caaacaggga
      841 aatatctatc aggattggtt gcagaaagca ttggagcaga gtttttacct gcaattctat
      901 ttgtgttagc cgcagcaatg gcgttttcaa caggaactag ctggggaaca tttggtatta
      961 tgttgccaat tggagcctca atggcagtgc attcagatcc agcattaatt attccttgtt
     1021 tatctgcagt aatggctggt gcggtttgtg gtgatcactg ttctccagta tctgatacca
     1081 ctattctttc ttcaacaggc gcacaatgta atcatatgga tcatgtcatt tctcaattac
     1141 cttatgcttt attagttgca acagcttcta ttattggtta cttagtggtt ggctttaccc
     1201 aatcagcggt attgggattt attgctacag ctgttgttat ggcaatactc attttgcttt
     1261 ttaaagaaaa aaagcattaa tttccgaaaa tgtgaaggga atcacagaat gagatttatt
     1321 gatgagataa aatagcactc aagatatgga tatcgaatgt tgtgttatat aaatct
//
LOCUS       DANLXD010000205         1373 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.206, whole genome shotgun sequence.
ACCESSION   DANLXD010000205 DANLXD010000000
VERSION     DANLXD010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1373
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.206"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..540
                     /locus_tag="PXD18_002583"
     CDS             <1..540
                     /locus_tag="PXD18_002583"
                     /inference="COORDINATES: protein motif:HMM:NF025072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL6302949.1"
                     /translation="SNKRKSVGYLGNLSNFFDWKLMFDICAQKSDIDFFFHGQLELKS
                     EENKEFFEKINALPNTYFSGRVTREQGAAAISCYDVLIIPFVINDAMHAVNPLKLWEY
                     FALGKPVISSPMDAIKIQPPELYVASTKDEWIVALDEALSEDIDALVKERRIAMAKEL
                     SWDNLAQQYNLGFESVAGS"
     gene            540..1289
                     /locus_tag="PXD18_002584"
     CDS             540..1289
                     /locus_tag="PXD18_002584"
                     /inference="COORDINATES: protein motif:HMM:NF012546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HDL6302950.1"
                     /translation="MSFPLDEYSFIQDEQGRKLYYVLRLAKNPKEARTLFILHGHQHN
                     ARASSFSDENWNVVCPIDNFGYEQCGSWWLGENNDFFVKALMLRLINNIKEITGSHRL
                     YFWGSSMGGYGSILYGLLTGAEAIFAHIPQIKLRNTKYTDGLPRKFFEKVINDENFPH
                     WTDLTSLLLITPKKKHPLFFITQTRFDYNRYLEDHTFEFINACQKLGSNYFLEIAPKK
                     GHILYRNVYQSVSFFDSYSSDIQEWLKDRQQ"
BASE COUNT          438 a          192 c          278 g          465 t
ORIGIN      
        1 tcaaataaga gaaagagtgt cggctatctt ggtaatttaa gtaatttctt tgattggaaa
       61 cttatgtttg atatttgtgc tcaaaaatct gatatcgatt tcttctttca cggtcagctt
      121 gaattaaaaa gtgaagagaa taaggagttt tttgagaaaa ttaatgcgtt accaaatact
      181 tattttagtg gtcgagtaac tcgtgagcag ggagcagcgg caattagctg ttacgatgtg
      241 cttattattc catttgttat taatgatgca atgcacgctg ttaacccatt aaaattatgg
      301 gagtattttg ctcttggtaa gcctgttatt tctagcccaa tggatgcaat taaaatacaa
      361 ccgcctgaat tatatgttgc aagcactaag gatgagtgga ttgtcgcttt agatgaggca
      421 ttgtcagaag atattgatgc tctagttaaa gagcggagaa tcgcaatggc gaaagagtta
      481 agttgggata atttagctca gcaatacaat ttgggttttg aaagtgtagc ggggtcgtaa
      541 tgagctttcc tttagatgaa tattctttta tccaagatga acaaggtaga aaactgtact
      601 atgttctgag actagcaaaa aatcccaaag aggcaagaac attgtttatt ttgcatgggc
      661 atcaacacaa tgctagagcg agtagttttt ctgatgaaaa ctggaatgtg gtttgcccaa
      721 tagataattt tggctatgag caatgtggat cttggtggct tggtgaaaat aacgattttt
      781 ttgtcaaagc attaatgtta agacttatta ataatatcaa agagattact ggtagccatc
      841 gtttatactt ttggggttcc tctatgggag gatatggttc aatattatat ggcttattaa
      901 ccggagcaga agccattttt gcgcatattc cccaaattaa attaagaaat acaaaatata
      961 ctgatggttt gccaagaaag ttttttgaga aagtaattaa tgacgagaac ttccctcatt
     1021 ggacagatct tacttctctg ttattaatta ctcctaaaaa aaagcatcct ttatttttta
     1081 ttactcaaac ccgatttgat tacaatagat atttggaaga tcatactttt gaatttatta
     1141 atgcttgcca aaaattaggt agtaactatt ttttggaaat agcgcccaag aaaggtcata
     1201 ttttatatag aaatgtttat caatctgttt ctttttttga cagttactcc tcagatattc
     1261 aagaatggtt gaaggatagg caacaatgat tgttagactt acgaacgatg gactaggtat
     1321 taatacggac tacagagctt tattgaagga tttttctgac ctttatgcaa aag
//
LOCUS       DANLXD010000206         1367 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.207, whole genome shotgun sequence.
ACCESSION   DANLXD010000206 DANLXD010000000
VERSION     DANLXD010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1367)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1367)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1367
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.207"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            399..>1367
                     /locus_tag="PXD18_002585"
     CDS             399..>1367
                     /locus_tag="PXD18_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302951.1"
                     /translation="MNADKANAEKLTDITSRVANAESTITNFQSTKANKSEVASIAQQ
                     NLQSIWRTDAQSAVDALKIGGANLLVDSEYLTTARWGGSSRVASSQYGDRRLTQVFVT
                     QAGTGHFGVTQGTQKATTRIRQGETYTLSLNAQGTAGFTRTGLNYVYLIREDGGNFRL
                     PTLPLTASLSQRPKVTFTAPWTSNQVRLLIGANGIFEATDWFAFHSVKLEMGNVATGW
                     TPTAKDIDDKVSAVQSNLTAYQAAQAKADQAKATQISGLTTRMGAAESNLTRTERAVT
                     ELNQTTVTTLRDLTARTKTTEGSLSRLETAKANKTEVASIAQSSLQS"
BASE COUNT          414 a          318 c          327 g          308 t
ORIGIN      
        1 atctctatct aatgcgtcaa gatgggaata acgttagatt accagtgatt aacgttgcct
       61 ctgaaacaga gttcaattat tacaaactga cgttcaaagc accgtttacc acacaacaag
      121 gctatttctt agttggtttt ttccaatcta ctccaaatca atttgttgag tttcatagtt
      181 taaagctaga aaaaggcaac gtagccacag actggacgcc agcaccggaa gatgtggaca
      241 gtgcggttag tgcagtttcc gctgatttaa cgagttataa acaaactcag gcggctaccg
      301 attcagcaca agcacagcaa cttaatcagt tatctgtgaa cttgaccaaa gcagagagca
      361 atttaaatgc caaaatcacg gaagaaaaaa atgctcgtgt gaatgccgat aaagcgaatg
      421 cagagaagct cacagacata acaagccgtg ttgcaaatgc ggaatcaact attaccaatt
      481 tccaatcaac caaagcgaat aaaagtgagg tggcaagtat tgcccagcag aacttacaga
      541 gcatttggcg caccgatgcg caaagtgcgg tggatgcctt gaaaatcggt ggtgcaaatc
      601 tactggttga tagtgagtat ttgacgacag cccgttgggg cggtagctca cgagtggcaa
      661 gctcgcaata tggtgatcgt cgcttgactc aagtgtttgt gacccaagca ggcacagggc
      721 attttggtgt gactcaaggc acacaaaaag ccactacgcg tattcgtcag ggtgaaacct
      781 ataccttgtc actaaatgcg caggggacgg caggttttac ccgcacaggg ttaaactatg
      841 tgtaccttat ccgcgaagat ggtggcaatt ttagattgcc aactttgccg cttactgcat
      901 cattgtccca acgccctaaa gtgacattta ctgcgccgtg gacgagcaat caagttcggt
      961 tactgattgg cgcaaatggc atatttgagg cgacagactg gttcgcattt cacagcgtta
     1021 agctcgaaat gggtaatgtt gccacaggct ggacaccaac cgccaaggat attgacgaca
     1081 aagtatcagc ggttcagtcc aacctcaccg cttatcaggc ggcacaagct aaagcagatc
     1141 aagccaaagc tacgcagatt tcggggctca caacccgaat gggggcagcg gaaagtaacc
     1201 tcactcgcac cgaacgggca gtgacggaac ttaatcagac aacggtgacg acactgcgtg
     1261 atctaaccgc gcgcaccaaa acaacggaag gttcgctctc tcgtttggaa accgccaaag
     1321 caaataaaac tgaggtggca agtattgctc aaagctcctt acagtca
//
LOCUS       DANLXD010000207         1287 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.208, whole genome shotgun sequence.
ACCESSION   DANLXD010000207 DANLXD010000000
VERSION     DANLXD010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.208"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            239..514
                     /locus_tag="PXD18_002586"
     CDS             239..514
                     /locus_tag="PXD18_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6302952.1"
                     /translation="MAKATVARRIKNAINGNFGDHKSLAGTGGLYEMRIATGAGYRIY
                     YAQQGNVIYILLHGGDKSTQQADIEKAKALWAELKTTGESNGNNTNQ"
     gene            492..815
                     /locus_tag="PXD18_002587"
     CDS             492..815
                     /locus_tag="PXD18_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDL6302953.1"
                     /translation="METIQINEQAAEKHGLRPFDVAEFLTDEATIQAYLAEVLKEGDQ
                     DEFLEALNNVARARGMAELAKQTGLGRESLYKTLAKGSKPRFDTIQKILGAFNLVLIP
                     QVKNG"
BASE COUNT          458 a          239 c          239 g          351 t
ORIGIN      
        1 atccaaatct acccaaattg taattttatg ctacataatt taaaagcgtg aacaatgttc
       61 aatgatatga ataattgaaa ctgctctctt ttcaaaattt aaccacttga ttatttgtat
      121 cttaatggat acactaagca ataaatagaa taagaggctg gcaatgacag agcaaaccac
      181 taatcaaatc atcattaccg ataatttttc aaaatagctt gagaatttaa agaaccctat
      241 cgcaaaagca acggtagcaa ggcggataaa aaatgcgatt aatggcaact ttggcgatca
      301 taaatcttta gccggtacag gcggacttta tgaaatgcgg atagcaacag gagccggata
      361 tagaatttat tacgcacaac aaggaaatgt aatttatatc ttgttacacg gcggcgataa
      421 atcaacacag caagccgata tagagaaagc gaaagcatta tgggctgaat taaaaactac
      481 aggggaaagc aatggaaaca atacaaatca atgaacaggc agcagaaaag cacggtttac
      541 gcccttttga cgtggcggag tttttaaccg atgaggcaac tattcaagcc tatttagcgg
      601 aagtgttaaa agagggcgac caagacgaat ttttagaagc cttgaacaat gtggcaaggg
      661 caaggggaat ggcggagctt gccaagcaaa cagggctagg gagagagagc ctatataaaa
      721 ccctagccaa aggcagcaaa ccacgctttg acactattca aaaaattcta ggggcattca
      781 atttagtgct tattccacaa gtcaaaaatg gctaaaactt atcacttgct acctgccaaa
      841 acctcacatt caaatagccg ttgattgata ttaacggctt ttttattgct taattctgta
      901 ccaattacgc accgattgcg gatcaatacg gggcaagttt tcgcaaaacc ttaatgaaat
      961 atgaccgctt gtgattttgt acaaaacgac acaaaccaat gtataaaatc aaaacttgcc
     1021 acaaatggcg gaatgatatt aaatgcccca caaactagca gtatttctta atgacttttc
     1081 attttaaggg tacatttaag ggtatgttta acaagtctta aatgcacttc tcaataataa
     1141 caagcctcat agcatacaat tcaaactcgg ctggggacca tttaagcgtt gcatattgtc
     1201 tttcactgtc tcaaatttac tataaaatca agaacttaga ttattttata gtctcttatt
     1261 gtcttcttta gttgcattgt atcttag
//
LOCUS       DANLXD010000208         1259 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.209, whole genome shotgun sequence.
ACCESSION   DANLXD010000208 DANLXD010000000
VERSION     DANLXD010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1259
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.209"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            35..949
                     /locus_tag="PXD18_002588"
     CDS             35..949
                     /locus_tag="PXD18_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302954.1"
                     /translation="MKNVHTKYDHKAVKHGFAIAIQNSVNYLYEIAERQPPCNFELCW
                     KNCAAHYLAIKSAESNNERDLNLFLDYINEPKDSTFTVAPLYKDNTLETRMILEIIKD
                     DNQIGFGFCEASDLSLIEDETKKIKAAMSLIDDLDPDTSNEIKCFIDTIYLTKEGLNG
                     ERFMRSGTNFYMWGMMFLYINKEHSILYYADHIIHECAHTALNIINATDELVTNSADE
                     RFKAPLRKDTRPMIGLFHALFVLHRICSSFQKMKEKIDDVYYDEFNHRLNDNLLKLHE
                     TYQTVRENAKTTEIGEKILNEIAKTWKL"
BASE COUNT          437 a          158 c          216 g          448 t
ORIGIN      
        1 taacagtagg tttctttaac aaattgaggt ttttatgaaa aatgtacata cgaaatatga
       61 tcataaagca gtgaagcatg ggtttgctat agcaatccaa aattctgtta attatttata
      121 tgaaattgca gaacggcagc ctccttgtaa ttttgaacta tgctggaaga attgtgcagc
      181 acattattta gcaataaaat ctgcagaaag taataatgaa agggatttaa atttattcct
      241 tgattatatt aatgagccga aagattctac atttacagta gctcctttat acaaggataa
      301 tacactagaa acaagaatga tcttagaaat tattaaagat gataaccaaa ttgggtttgg
      361 attttgtgag gctagtgatt tatctttaat tgaggatgaa actaaaaaaa tcaaggcagc
      421 aatgagctta attgatgatt tagaccctga tacttctaac gagataaaat gtttcattga
      481 tacaatttat ttaacaaaag aaggccttaa tggcgagcga tttatgcgtt ctggcacaaa
      541 tttttatatg tggggaatga tgtttttgta tataaataag gaacactcta ttctttatta
      601 tgcagatcat ataattcatg aatgtgctca tacagctctt aacattataa atgcaactga
      661 tgaattagta acaaattcag ctgatgaacg ttttaaagca cctttaagaa aggatactcg
      721 tcctatgatt gggctatttc atgcgttgtt tgtactccat agaatatgtt cctcctttca
      781 aaaaatgaaa gaaaagatag atgatgttta ttatgatgaa tttaaccata gattaaatga
      841 taacctgttg aagttacatg aaacatacca gactgttaga gaaaatgcaa aaacgacaga
      901 gattggtgag aaaattttaa atgaaattgc caaaacttgg aaactttaat caatctgaaa
      961 ttatgatgag aatgttagtt ttctttaatt caatattctc atctacatta attgcttttg
     1021 ctattttctt ttttatggat aatggtataa atgctcatga ggtatcattc ttggtatctg
     1081 ttaaattttg ggcgattatg cttttttcat tgtctattta tatttttaac cagactcaaa
     1141 taaggtactt atttgtattg tcgggtatat taaagattat tgcagttatt attatttatt
     1201 tggaacagag cctcatatct ttaacggcat ttattttgat aaattgtcta gggggcata
//
LOCUS       DANLXD010000209         1233 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.210, whole genome shotgun sequence.
ACCESSION   DANLXD010000209 DANLXD010000000
VERSION     DANLXD010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.210"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..244
                     /locus_tag="PXD18_002589"
     CDS             <1..244
                     /locus_tag="PXD18_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4102 domain-containing protein"
                     /protein_id="HDL6302955.1"
                     /translation="ATKKTLSDTLLKNLKYSPNAKPIADSNGLFILAQKKAKVWIYSY
                     ISPKTGKRSTKNRIGSYPQMSLVEQSPQVFEQIARL"
     gene            296..883
                     /locus_tag="PXD18_002590"
     CDS             296..883
                     /locus_tag="PXD18_002590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SocA family protein"
                     /protein_id="HDL6302956.1"
                     /translation="MFDELKIAQATAYLLHKAGGTMEHIKVMKLLYLADRLSWQRYGY
                     SISNDEYYSLPYGPVLSNTLNLMRGEEASLYQKTSIWGEWIADKEDHKISLKKSVNTE
                     DEYFFDCLSESDTEILEEVFATFGNYKPFALVEYTHNPKYIPEWEDPQGRSKPISLST
                     LLTKLGKTPSEIESILEQQAEKGTMDNLFKGLGNA"
     gene            876..1233
                     /locus_tag="PXD18_002591"
                     /pseudo
     CDS             876..1233
                     /locus_tag="PXD18_002591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252950.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
BASE COUNT          454 a          235 c          244 g          300 t
ORIGIN      
        1 tgcaactaaa aaaacacttt cagacacatt actaaaaaat cttaaatatt ccccaaatgc
       61 gaagcctatc gcagacagta acgggctatt tattcttgca cagaaaaaag cgaaagtatg
      121 gatttatagc tatatcagcc ccaaaacagg caagcgaagc acaaaaaata gaatcggtag
      181 ctatccgcaa atgagcttag tggaacaatc cccacaggta tttgaacaaa tcgcacgtct
      241 ttaaaatatt aaattaagag aaagcactat ttgcgatgta gcaggagata aaacaatgtt
      301 tgatgaatta aaaatagccc aagcgaccgc ctatttgcta cataaggcag gcggaacaat
      361 ggagcatatt aaggtaatga aattgcttta tcttgcggat cgcttatcgt ggcaaagata
      421 cggctattct atttctaatg atgaatatta ttcattgcct tatggaccgg tattaagcaa
      481 cacactcaac ctaatgcgag gagaagaagc gagcttatac caaaaaacca gtatttgggg
      541 cgagtggata gcagataagg aagatcacaa aatcagcctt aaaaaatccg taaataccga
      601 agatgaatac ttctttgatt gcctttcaga gagcgacacc gaaattttag aagaggtatt
      661 tgcgaccttt ggaaattata agccattcgc cctagtggaa tatacccata accctaaata
      721 cattcccgaa tgggaagacc cacaaggcag aagcaagccg atttctttaa gcacgcttct
      781 tactaagcta gggaaaacgc caagcgagat cgaaagcatt ttagagcaac aggcggaaaa
      841 agggacaatg gataaccttt tcaagggctt aggcaatgct tgaaatcaaa agacaagtaa
      901 cgattcttag accgaccaac tacggcaagg aagagaacca ctacaagcat ttatatattc
      961 tgcttaccga tccgtgcttt gatggtgaaa ccggtaaagg agatatgatt ttaagtgtaa
     1021 actgctcaag cattaaagac gggaaagcac ttgatgaaac ttgtatttta aaggcaggaa
     1081 cacacgaatt tatcacacgg gacagcttca ttttctaccg ccatataaaa attgattcgt
     1141 tagatgagat taaggcaaat atagaagccg gttattttat tcaaaagccc taattaatga
     1201 tgaagcctat caacaaatac taaaaggcgt act
//
LOCUS       DANLXD010000210         1177 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.211, whole genome shotgun sequence.
ACCESSION   DANLXD010000210 DANLXD010000000
VERSION     DANLXD010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1177)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1177)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1177
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.211"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..841
                     /locus_tag="PXD18_002592"
     CDS             <1..841
                     /locus_tag="PXD18_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AlwI family type II restriction endonuclease"
                     /protein_id="HDL6302957.1"
                     /translation="DNNLRADAPLETISEAFKLDISKVYVALSKDLGITIKSPEQAAT
                     YVNDERYRRFNTLIDKKFNDSVLIELLNCFEKRDDKRIEELVTDEAAIPTIFEYILGI
                     IWYKVSERQGNILDFMKLSLEANLLPKTHAAGGYADIIYEYEACTSYPKHSLLLEATL
                     ADGNNQRRMEMEPVSRHLGDYRIRFNNPFDYSLFVSTYLDKNVISDFRYRKIIPYTRD
                     EETITGMKIISMDTDSLKKIIENKVKYKYLYEIFDKYHEMPLETVDWHDGMIKEATGE
                     YKS"
     gene            903..>1177
                     /locus_tag="PXD18_002593"
     CDS             903..>1177
                     /locus_tag="PXD18_002593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HDL6302958.1"
                     /translation="MKNRIEHPKIFISYAWGSQEHDEKVIALATNLKGDGIDVIFDKW
                     QLKEGNDTFKFMEKSVLDESITNVLILIDPIYAKKANERAGGVGTET"
BASE COUNT          446 a          146 c          240 g          345 t
ORIGIN      
        1 agataataat ctcagggctg atgccccact tgaaactata tcagaagcat tcaagttaga
       61 tattagcaaa gtatatgtag ctttaagtaa agatttagga attacaatta agagtccgga
      121 acaagctgca acttatgtaa atgatgaacg atacagaaga tttaatactt tgatcgataa
      181 gaaatttaac gattctgtgc ttatagagtt actaaattgt tttgagaaac gtgatgataa
      241 aaggattgaa gaacttgtta cagatgaggc tgcaatacct actatttttg aatatatttt
      301 gggaattata tggtacaaag tgagcgaaag acaaggaaat attttggatt tcatgaagtt
      361 atcattagaa gccaatttat tgccgaagac ccacgcagct ggaggttacg cagacattat
      421 atatgaatat gaagcgtgca cctcttatcc gaaacattca ttattgcttg aagcaaccct
      481 tgcagatgga aataatcaaa gaagaatgga aatggagcct gtttcaagac atttaggcga
      541 ttataggatt agatttaata atccgtttga ttacagccta tttgttagca catacttaga
      601 taaaaatgta atctcagatt ttagatatag aaagataatt ccatacacca gagatgaaga
      661 aaccattaca ggaatgaaga ttatttcaat ggacacagat tctcttaaga aaataattga
      721 gaataaggtt aagtacaagt atctgtatga aatatttgat aaataccatg aaatgccatt
      781 agagactgta gattggcatg atgggatgat aaaagaggct actggagagt ataagtcata
      841 gtgattataa gatagtgaga aagaatactt attttgaaag gaatacatgg gaattgatac
      901 agatgaagaa tagaattgaa catcctaaga tttttatttc atatgcttgg ggatcacagg
      961 aacatgatga gaaggttatt gctttagcta caaatcttaa aggagatggt atagatgtca
     1021 tttttgataa atggcagcta aaagaaggca atgatacctt taaattcatg gaaaaaagtg
     1081 ttttagatga gagtattacc aatgtactga ttcttataga tcctatttat gcaaagaaag
     1141 caaatgaaag agccggtggc gtaggtacag aaacaca
//
LOCUS       DANLXD010000211         1126 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.212, whole genome shotgun sequence.
ACCESSION   DANLXD010000211 DANLXD010000000
VERSION     DANLXD010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.212"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..>1126
                     /locus_tag="PXD18_002594"
     CDS             <1..>1126
                     /locus_tag="PXD18_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1983 domain-containing protein"
                     /protein_id="HDL6302959.1"
                     /translation="ANQRLATIPVIASLANRPKITFTAEWTSERAYLLVGVNGTYENT
                     DWLAFHSVKLEKGNVATDWTPAPEDVESSVSAVSAKIDTIQETLANADSALSSRIDAV
                     TASVGSNLAKITQVSNAVAGVDGKLSATHTIKTETIAGGRKAIAGIALGAAADNRNAE
                     SSVIVMADKFEVVKNAQDGQPVRLFGVAQNKVAINGNLIATGTIKGSHIDADSVRAGI
                     LTAGAIRTEHLAAGQISADKLAIGLGGNLLVNPIFATPDLSIAPFGWNYWRGEVGDRL
                     NIDTRNIFNRNEQDNYGLKNGGLPNELVFSMRYSTTKETSDTGRIGWLSQDINVVPNK
                     KYIASVWLACHRGQAKLVIENIEKPGGAYLGRIGNSEVITG"
BASE COUNT          340 a          212 c          280 g          294 t
ORIGIN      
        1 gctaaccaac gattagcaac aatacctgtt atagctagtt tagcaaacag acctaaaata
       61 acctttactg ccgaatggac aagtgagcga gcctatctgc ttgttggtgt aaatggtact
      121 tatgagaata cagattggtt agcgtttcac agcgtaaaac ttgaaaaagg aaacgtagcg
      181 acagattgga cgccagcccc tgaagatgtg gaaagctccg tgagtgcagt ttcggctaaa
      241 attgatacta ttcaggagac tttagcgaat gccgactctg cattaagctc tcgtattgat
      301 gccgttactg cttctgttgg ctcaaacttg gcaaaaatta ctcaagtgag taatgctgta
      361 gccggtgtgg acggcaaatt atctgctacc cataccatca aaaccgaaac cattgccggt
      421 ggacgtaaag cgattgccgg tatcgcactt ggtgccgcgg cagacaatcg caatgcagaa
      481 tcctctgtca ttgtaatggc agacaaattt gaggtagtaa aaaatgctca agacggccaa
      541 ccggtacgat tgtttggtgt ggctcaaaat aaagttgcga ttaatgggaa tttaattgca
      601 acaggtacaa ttaaaggtag ccacattgat gcagactcag taagagccgg aatattgacg
      661 gcgggagcta tccgtacgga acacctggca gcagggcaaa tatcggcgga taagttagcg
      721 attgggctag gtgggaattt gctggttaat cctatttttg caacacccga tttgtcaata
      781 gctccgtttg gctggaacta ctggcgagga gaagttggtg atcggctaaa tattgacacc
      841 cgtaatattt tcaataggaa tgaacaagat aattacggac taaaaaatgg aggactacca
      901 aatgagttag tattttcgat gcggtatagc actacaaagg aaacctctga tactgggcga
      961 attgggtggt tatctcagga tattaatgtt gtgcctaata aaaaatatat tgcctccgta
     1021 tggttagctt gtcatcgtgg gcaagctaaa ttagtcattg agaatatcga aaaacctggt
     1081 ggtgcttact taggtcggat aggcaacagc gaggtaatta ctggct
//
LOCUS       DANLXD010000212         1103 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.213, whole genome shotgun sequence.
ACCESSION   DANLXD010000212 DANLXD010000000
VERSION     DANLXD010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1103)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1103)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.213"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..1022
                     /locus_tag="PXD18_002595"
     CDS             <1..1022
                     /locus_tag="PXD18_002595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302960.1"
                     /translation="AATLVLSACGGSGSGGSSSTPNHPKPVLVPKTQNNLQAQNVPQA
                     QNASQAQNAPQAQNAPQAQNAPQVENAPQVENAPQAEVTPPVPQPQSQKIDGSFDKIG
                     SVKLNKEAQTLELSRFTLVDKLGTPPKFDKVSGKKIIEEKDFLVLNLSDINAEQLSGD
                     FLIRRSDDLFYGYYHDTNGKNLVDAADKFSQYFVVYDEKRVNDNISDKLTATYRKKEG
                     FVYGSNPHTKEFAARISKLGDVEIKFENGQAQGSIKDEKDGNAEIFTIKGDTKQLEIT
                     PTESNRIIIAILDQNQKSYTPGMEKAIMETKFIDSKAGNSDQKYLIGEAKSDNWQAIM
                     VSEKK"
BASE COUNT          409 a          202 c          209 g          283 t
ORIGIN      
        1 ttgctgcaac cttagtttta agtgcttgcg gaggaagcgg tagcggaggt tcgtcttcaa
       61 caccgaatca ccccaaacca gtactagtac caaaaacaca aaataatctt caagcacaaa
      121 atgttcctca ggcacaaaat gcctctcagg cacaaaatgc ccctcaggca caaaatgctc
      181 ctcaggcaca aaatgctcct caggtggaaa atgctcctca ggtagaaaat gctcctcaag
      241 cagaggttac tccgcctgta ccacagccac aatcacaaaa aattgacggt tcttttgata
      301 aaattggttc agtaaaactc aataaagagg ctcaaactct tgagcttagt agattcactt
      361 tggtggataa attaggcaca ccaccgaagt ttgataaagt aagcggtaaa aaaattattg
      421 aagaaaaaga ttttctcgta ttaaatttgt ctgatattaa tgctgaacaa ctctctggcg
      481 attttcttat tcgccgtagc gatgatctat tctatggcta ctatcacgat acaaatggca
      541 aaaatcttgt cgatgctgcc gataaattca gtcaatattt tgtcgtgtat gatgagaaac
      601 gggtaaatga taatatctct gataaattaa cagcaactta ccgtaaaaaa gaaggctttg
      661 tatatggttc aaatccacat actaaagaat ttgccgcacg gatcagcaaa ttgggggatg
      721 tagaaattaa atttgaaaat ggtcaagctc aaggaagtat aaaagacgaa aaagatggaa
      781 atgctgagat ctttactatt aaaggtgata caaaacagtt agagattacc ccaacggaaa
      841 gtaaccgaat cattatagca attttagacc aaaatcaaaa aagctatact ccaggaatgg
      901 aaaaagcaat tatggaaact aagtttattg attcaaaggc tggtaattcc gaccaaaaat
      961 acttaatcgg tgaagcaaaa agcgataact ggcaagcaat aatggttagc gagaaaaaat
     1021 aaagttatct tttgctaaaa actgaaataa aaaggctgag tccgggtaat atcggcctca
     1081 gtcttttaaa ttgtagaaaa tca
//
LOCUS       DANLXD010000213         1093 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.214, whole genome shotgun sequence.
ACCESSION   DANLXD010000213 DANLXD010000000
VERSION     DANLXD010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1093)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.214"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..192
                     /locus_tag="PXD18_002596"
     CDS             <1..192
                     /locus_tag="PXD18_002596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6302961.1"
                     /translation="PQDGSVIDWDNIKNAKLTKYPLDNSEKRTSYLGCFTTDVSESYT
                     VDGESVRDIQLNALRKVNE"
     gene            192..560
                     /locus_tag="PXD18_002597"
     CDS             192..560
                     /locus_tag="PXD18_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302962.1"
                     /translation="MKITLNLGIEYNGKIRRDCTVRLLTMGGQCTAQEMIADLGFEEN
                     SEALSKREQTLVDMAYLSQQVTFDGIYQGNVTAQFLFDNLATEDYWQLIEATLTLRKK
                     RLENGVSQSESESPANPDLA"
     gene            590..778
                     /locus_tag="PXD18_002598"
     CDS             590..778
                     /locus_tag="PXD18_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302963.1"
                     /translation="MILLSKFAITAEQVWQMPLLEVFAWIESYLESEGVKTPHSPMGA
                     NSEVKRESYVFTRCGKIE"
     gene            831..>1093
                     /locus_tag="PXD18_002599"
     CDS             831..>1093
                     /locus_tag="PXD18_002599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302964.1"
                     /translation="MAKNMKVQLELTAKDTASPVLNQAAKTAEKAFKNTERAAQKSGN
                     AQTQAAQKAANATESSNRKIEQSYRNARRVAADVSRARETLGVR"
BASE COUNT          348 a          216 c          274 g          255 t
ORIGIN      
        1 cctcaagacg gttcggtaat tgattgggat aacattaaaa atgcgaagct cactaaatac
       61 ccgttagaca atagcgaaaa acgcacctct tatttaggct gttttactac cgatgtgagc
      121 gagtcttaca ccgttgatgg tgagtcggtg cgtgatattc aactcaacgc attgcgtaag
      181 gtgaatgaat aatgaaaatc actttaaatc ttggcattga atataacggg aaaattcgcc
      241 gtgattgtac ggtgcgattg ctgacgatgg gcggtcaatg cacggctcaa gaaatgattg
      301 cggatttagg gtttgaggaa aactcggaag ccctatcaaa gcgtgaacaa accttggtcg
      361 atatggctta cctttcgcag caagttacct ttgatggtat ttatcaaggt aatgtgacgg
      421 ctcaattttt atttgacaat ttagctaccg aagactactg gcagttgatt gaggcaacgc
      481 tcacactccg aaaaaagcgg ttagaaaatg gggtgagcca aagcgagagc gaaagcccgg
      541 caaatcccga tttggcgtag cagaagcctt taagcagtac cgacaagcgg tgattttact
      601 ctcaaaattt gcaattaccg ccgagcaggt atggcaaatg ccgttgcttg aggtatttgc
      661 gtggattgag agctacttgg agagtgaggg cgtaaaaaca ccgcatagcc caatgggtgc
      721 gaatagcgaa gtgaaacgcg aaagctatgt ctttactcgg tgtggcaaaa ttgaataggg
      781 gcgaaagccc cttttttgta ctttaaaatg agtttaaaga gactttaaaa atggcaaaaa
      841 atatgaaagt gcaactggaa ttgacggcaa aagatactgc ctccccagtt ttaaaccaag
      901 ccgctaaaac cgccgaaaaa gcctttaaaa atacagagcg agcggcacaa aaaagtggca
      961 atgctcaaac gcaagcagca cagaaagcag cgaatgctac agaaagctca aatcggaaaa
     1021 tagaacagag ttaccgtaat gcccgccgag tggctgccga tgtgagccga gcccgtgaaa
     1081 cattaggtgt tcg
//
LOCUS       DANLXD010000214         1048 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.215, whole genome shotgun sequence.
ACCESSION   DANLXD010000214 DANLXD010000000
VERSION     DANLXD010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.215"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            206..454
                     /locus_tag="PXD18_002600"
     CDS             206..454
                     /locus_tag="PXD18_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302965.1"
                     /translation="MISGEKMTWESLGASAIGGAIGGGIGATMKAGAVTASTLSALGG
                     GMGEGLYKSTSQGIKNSIGIKASCNQSGSDYGDGCDYQ"
     gene            466..669
                     /locus_tag="PXD18_002601"
     CDS             466..669
                     /locus_tag="PXD18_002601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302966.1"
                     /translation="MKIQFPISYQEFRENYFEKKPLLMKGAISQKDLLSWKSINEILP
                     RCDLISEDAIKVMHKGKRAHKKD"
     gene            708..>1048
                     /locus_tag="PXD18_002602"
     CDS             708..>1048
                     /locus_tag="PXD18_002602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_046701250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6302967.1"
                     /translation="MKITHCKLKKSLQKKLLEFFVAEVTARTAADLLGIQPNTAALFY
                     HKIRLVIEHHLALEAHEIFEGKIEVDESYFGGHRKGKRGRGAAGKVAVFGLLKRQGKV
                     FTKYQIRNANAG"
BASE COUNT          344 a          138 c          253 g          313 t
ORIGIN      
        1 cttgtaaaga agattgtaaa aaataaaaat gtacaagatg ttattgaggc tatagttcta
       61 atagtatttg ttgtaattat aaacatcata gaggaatatc tcttatgaaa gagttaaaaa
      121 ttgaggattg ccaatttgtt tcggcaggct tgcacttgtt attgtaggag ctgttgctgg
      181 agctgcatat tatgttggga atggtatgat ttctggggaa aaaatgactt gggagagttt
      241 gggagcatca gctataggtg gggctattgg tggcggtatt ggagcaacaa tgaaagctgg
      301 tgcggtgaca gcgtcaacct tatctgcttt aggtggtggt atgggggagg gcttgtataa
      361 aagtacttct caaggtatca aaaatagtat tggtataaag gcgagttgca atcaatcagg
      421 ttcggattat ggtgatggat gtgattatca ataagagagt atattatgaa aattcaattt
      481 ccaatttctt atcaagaatt tcgtgaaaac tattttgaga aaaaaccact tttaatgaaa
      541 ggagcaatat ctcagaaaga tttactttct tggaagtcaa taaatgaaat attacctcgc
      601 tgtgatttaa tttctgagga tgcaattaag gtaatgcata aagggaaaag ggctcataaa
      661 aaagattagg ggctgtagta gattagcatc actgctatac tacaaaaatg aagataaccc
      721 attgtaaatt aaagaaatct ttgcagaaaa agcttcttga attttttgtt gctgaagtga
      781 ccgctagaac cgctgctgat ttattaggta ttcaacccaa tacggcagcc ctgttttacc
      841 acaaaattag gctggtcatt gaacaccatt tagcccttga agctcatgaa atttttgagg
      901 gaaaaattga ggtagatgaa agctattttg gtggtcatcg caaaggaaaa cgagggcgag
      961 gtgcggctgg gaaagtcgct gtattcggtt tgttgaagcg tcaaggaaag gtgtttacaa
     1021 aataccaaat cagaaacgct aatgccgg
//
LOCUS       DANLXD010000215         1040 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.216, whole genome shotgun sequence.
ACCESSION   DANLXD010000215 DANLXD010000000
VERSION     DANLXD010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.216"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            195..881
                     /locus_tag="PXD18_002603"
     CDS             195..881
                     /locus_tag="PXD18_002603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302968.1"
                     /translation="MAANSINASHIVGSSITADKLNVNNLAAISANLGKVTAGTITGT
                     TISGGTISGTTITGGIIKGARIEGLTGKFTGELEINQLIGGNIYEAKTWTSKATGKSK
                     TYSETKNSFALSDTYYEYVCQFVLPATKATRTLYVVHTPTGESKSETFYGSGSNRTPT
                     TITLPSVIDISNTISPNVSNPFNDSGAILIANTQYVVTCRAWCAGRGRSAKVNFRAII
                     SSTNGSSYQL"
BASE COUNT          368 a          192 c          211 g          269 t
ORIGIN      
        1 gctaatcaac ggttagcaac aatacctgtt atagccagcc tattaaacag acctaaaata
       61 gcccttggca aaatgccggt gtaaccgcta tccacggtgg ctcaatagtt actaataccg
      121 ttactgctca acaaattgca gcaaatacca ttaccgccaa cgaaatcgca gccggcacga
      181 ttgcagctcg aaatatggca gcaaactcga ttaatgcaag tcatattgtg gggagttcga
      241 tcactgcgga taagctaaat gtaaacaatt tagcggcaat atcggcaaat cttggtaagg
      301 taactgctgg tacaattaca gggacgacaa ttagtggtgg gacaatttca ggtacaacaa
      361 ttacaggggg aataattaaa ggagcaagaa ttgagggatt aacaggtaaa tttactggag
      421 aacttgaaat caaccaattg atcggaggta atatctatga ggctaaaact tggacatcaa
      481 aagcaacagg gaaaagtaaa acatattcag aaacgaaaaa cagttttgca ttaagtgata
      541 catattatga gtatgtatgt caatttgtac tacctgctac aaaagcgacg agaacattgt
      601 atgttgtcca cactccaaca ggagagagta aaagcgaaac tttttatggt agtggtagta
      661 atcggacacc gacaacaatt acattaccgt ctgtaattga tattagcaat actatttcac
      721 ctaatgtatc taacccattt aatgattctg gggcaatact cattgctaat actcaatatg
      781 tagtaacgtg tcgtgcgtgg tgtgcagggc gtgggagaag tgctaaagtg aattttcgag
      841 caattatatc atctacaaat ggttcatctt atcaattata ggaggcaaat atgaaaaaaa
      901 ttatactact tacaacaatt atggtttcag cttgtacaac tcaatataag caagactata
      961 caacaaaacc aaccttttgt tatcaactag cccctcaaga gcaattaccg gggaaaaact
     1021 gtattggctc aggagggcat
//
LOCUS       DANLXD010000216          973 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.217, whole genome shotgun sequence.
ACCESSION   DANLXD010000216 DANLXD010000000
VERSION     DANLXD010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 973)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 973)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.217"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..259
                     /locus_tag="PXD18_002604"
     CDS             <1..259
                     /locus_tag="PXD18_002604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6302969.1"
                     /translation="TYRSYDALDVSEFHHERINHSELFAEKQNHINGIENFWNQAKRV
                     LRKYNGINRKNFPLFLKECEFRFNFGTPKEQLKTLRKWCEI"
     gene            265..603
                     /locus_tag="PXD18_002605"
     CDS             265..603
                     /locus_tag="PXD18_002605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302970.1"
                     /translation="MYYSPKDYLEEYNDLGTIRYKFQEENLYGFLRDGATLVANGIVN
                     EPSVDCFSQEIAQFTGCHIFSSLYIAFNTQRSFKSHWDSRDIFAVQMQGKKRWIIHTP
                     TFKKTIVYAS"
     gene            593..>973
                     /locus_tag="PXD18_002606"
     CDS             593..>973
                     /locus_tag="PXD18_002606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin-like domain-containing protein"
                     /protein_id="HDL6302971.1"
                     /translation="MHRSKDMPEYAPNLDDVYMDIVLEAGDVLYLPRGWWHDPIPVGE
                     ETVHLAVGIFPAYTHNYLTWVSQNMVEKEIARASLSHYESDKELIAQLAEQTAEYIKD
                     KENYHKFIENFYDQKRVEKPLNLET"
BASE COUNT          326 a          149 c          190 g          308 t
ORIGIN      
        1 tacctatcgt agctatgatg cccttgatgt gagcgaattt catcacgagc gaatcaacca
       61 ttccgaactg tttgcggaga aacaaaacca tatcaatggc attgaaaatt tttggaatca
      121 agcgaagcga gtactccgaa aatataacgg aattaaccga aaaaatttcc ctttattctt
      181 gaaggaatgt gaatttcggt ttaactttgg tacaccaaaa gaacagctca aaacgttgcg
      241 aaaatggtgt gagatttagg gctaatctac tacagcccca aagattattt agaagaatat
      301 aatgatctag gtactattcg ttataaattt caagaagaaa atttatatgg ttttttaaga
      361 gatggggcaa cattagtcgc aaatggtatt gtaaatgaac caagtgttga ttgcttctct
      421 caagagatag ctcaatttac aggctgtcat attttttcaa gtttatatat tgcgtttaat
      481 actcaaagat cttttaaaag ccattgggat agtcgtgata tttttgcagt tcaaatgcag
      541 ggtaaaaagc gttggattat tcacactcca acatttaaaa aaaccattgt ttatgcatcg
      601 tagtaaagat atgcctgaat atgctcctaa tcttgatgat gtatatatgg atattgtatt
      661 agaagctgga gatgttcttt atttacctcg tggctggtgg cacgatccta ttcctgttgg
      721 agaagaaact gtgcatttag ctgtaggcat ttttcctgct tatactcata actatctgac
      781 ttgggtatct caaaatatgg ttgagaaaga aattgcccga gcttctttat cgcattatga
      841 gtcagataaa gagttgatag cacagttggc agaacaaaca gcagaatata ttaaagataa
      901 agagaattat cataaattta tagagaattt ttatgatcag aagcgggttg aaaagccact
      961 taatttggaa act
//
LOCUS       DANLXD010000217          966 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.218, whole genome shotgun sequence.
ACCESSION   DANLXD010000217 DANLXD010000000
VERSION     DANLXD010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 966)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 966)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.218"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            165..683
                     /locus_tag="PXD18_002607"
     CDS             165..683
                     /locus_tag="PXD18_002607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein"
                     /protein_id="HDL6302972.1"
                     /translation="MQKKLFIAQIKQNLSELNVFSTDNIFLNSPYFSQQTGLVSVFIA
                     EIEKTVELLLNQTEVLYSEFYAEKLVKQVDALKNAVEKIQSKPESAQFHSSYQFSPNI
                     HRLAPNKRLQEYRKALRALNEKISWLVEQNLNTQNEATKQTLQNQITETEYRKMKCLK
                     AIEDLEQELLFK"
     gene            complement(687..760)
                     /locus_tag="PXD18_002608"
     tRNA            complement(687..760)
                     /locus_tag="PXD18_002608"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(726..728),aa:Cys,seq:gca)
     gene            complement(776..851)
                     /locus_tag="PXD18_002609"
     tRNA            complement(776..851)
                     /locus_tag="PXD18_002609"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(816..818),aa:Gly,seq:gcc)
BASE COUNT          340 a          178 c          164 g          284 t
ORIGIN      
        1 atagttcaca tttttgatat ttaatttctt ttttgcctgt ttttcacgca cgaattgtaa
       61 gaaattagta aaaatcaacc gcttgtacgc aaagtgtttt gctttaaaat agaagttata
      121 tgaaataaaa ttcacttaaa ttttctttat tgataacatc aaccatgcaa aaaaaacttt
      181 ttatcgccca aataaaacaa aacctctcgg aattaaatgt attttcaacg gataatattt
      241 ttctgaattc accctatttc tcacagcaaa ccggtttggt gagtgtgttc attgctgaaa
      301 ttgaaaaaac agttgagcta ttattgaacc aaactgaggt gttatatagt gaattttacg
      361 ctgaaaaatt ggttaaacaa gttgatgcat taaagaatgc cgtagaaaaa atccaaagta
      421 agccagaatc agctcaattc cattcttcct atcaattttc tccaaatatt catcgtttag
      481 cgcccaacaa acgcttacaa gaataccgta aagcgttacg tgcattgaac gagaaaatta
      541 gctggttagt tgagcaaaat ttaaatacgc aaaatgaagc aactaaacaa accctgcaaa
      601 atcaaattac agagacagaa tatcgcaaaa tgaaatgttt aaaagcaatt gaagatttag
      661 aacaagagtt gctatttaaa tagtgatgga ggcgtgtccc ggagtcgaac cgagctacat
      721 ggatttgcaa tccagtgcat aaccgctttg ctaacacgcc ataagatttg gaaattggag
      781 cgggaaacga ggctcgaact cgcgaccccg accttggcaa ggtcgtgctc taccaactga
      841 gctattcccg catctgaatt cccacaacat tgcgctgtgg aacgaggtgc attttacgga
      901 tttatcattt tatgtcaatg ctaaatttaa cattctagat tcaaatgctg aaaaaaaact
      961 cactat
//
LOCUS       DANLXD010000218          966 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.219, whole genome shotgun sequence.
ACCESSION   DANLXD010000218 DANLXD010000000
VERSION     DANLXD010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 966)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 966)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.219"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            141..>966
                     /locus_tag="PXD18_002610"
     CDS             141..>966
                     /locus_tag="PXD18_002610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL6302973.1"
                     /translation="MLNWAGKSTAYQTLQTPTSKTLTPCEEESVDFENTQNIFIEGEN
                     LDVLKALQKSYFNSVKMIYIDPPYNTGNDFIYNDSFADTKADYAEKVGDVDEHGKLKR
                     AFVRNSKENGHYHSNWLNMMLPRLHLAKNLLRDDGVIFISIDDNEQAQLKLLCDEVFG
                     EENFVAILSVENNPKGRKNSKFISVSNDFCIIYAKNKEMGKFVENIPKNAKDMCQDEN
                     GHYVHASGKRVLVGENKFNQPVTDFTSDKHYSVYFNKLDDDIILKFEDSLDDKDLNL"
BASE COUNT          337 a          156 c          179 g          294 t
ORIGIN      
        1 ttgccaactt ttcgcttaaa gatcaacaac tttctcaatt aaaatccctt ttacctgaaa
       61 ttttcaccga aggtaaaatc gacttcgaca aattccaaca acttttttcg gataattttt
      121 ccaccgaacc tgaccgctat atgctcaact gggcaggaaa atcaacagcc tatcaaacct
      181 tacaaacccc aaccagcaaa acgctcactc cttgcgagga agagagtgtg gattttgaaa
      241 atacgcagaa tatctttatt gagggtgaaa atttagatgt attaaaagcc ctgcaaaaat
      301 cctacttcaa ttcggtcaaa atgatttata tcgatccgcc atacaataca ggcaacgatt
      361 ttatttataa cgacagtttt gccgatacca aagcagatta tgcggagaaa gtgggcgacg
      421 ttgatgaaca cggcaaattg aaacgagcct ttgttcgtaa cagcaaagaa aatgggcatt
      481 atcacagtaa ctggctgaat atgatgttgc ctcgtttgca tctcgcaaaa aatttactgc
      541 gtgatgacgg ggtgattttt atttcaattg atgataacga acaggcacag ctgaaattgc
      601 tttgtgatga agtgtttggg gaggagaatt ttgttgccat attatcagtt gaaaataatc
      661 cgaaaggtag aaagaattct aaatttattt ctgtaagtaa tgatttttgt attatttatg
      721 ctaaaaataa agaaatgggg aaatttgttg aaaatattcc taaaaatgct aaggatatgt
      781 gtcaagatga aaatggacat tatgttcacg caagtggaaa acgagtatta gttggggaaa
      841 acaaatttaa tcagcctgta acagatttta cctcagataa acactattca gtttatttta
      901 ataaattaga tgatgatatt attttaaagt tcgaagattc tcttgatgat aaggatttaa
      961 atttaa
//
LOCUS       DANLXD010000219          961 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.220, whole genome shotgun sequence.
ACCESSION   DANLXD010000219 DANLXD010000000
VERSION     DANLXD010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 961)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 961)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.220"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            223..961
                     /locus_tag="PXD18_002611"
                     /pseudo
     CDS             223..961
                     /locus_tag="PXD18_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524908.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication protein"
BASE COUNT          341 a          166 c          151 g          303 t
ORIGIN      
        1 gactcctcta atagtccact cttgttccat tttggaacat ttttgtatat tatttcgcct
       61 tttctttctc attgtgttct atgtaggcaa cagcattttt tgcaaagtga tcgacgagaa
      121 cattcattac ttcagtccat tttacaggtc ttcctatctt cattccaact tccatcgcta
      181 atctttctat cttgagtttt ttctctaatt taatattgaa cagagcttta tgaaatggtt
      241 gatatagaac aaacgtcagt tgattggatt gatgtaactt attcagctca tattgattcg
      301 gaatctatcc aaaaacaact tatctctttt ttccaaaaca tccatttagg acaaacacgt
      361 cgtacaagac ataacaaaga atatgacaca acggcagaat ggaattcagg ttcagaacac
      421 cgtattttaa aagtttatct aaaaggtaat gaagttcaaa aaagactaca agaagcccag
      481 cacgacttca aaaaatcacc aagtaaaaag tatctgcaaa actcaattca agtattaagt
      541 aatccaaatc tcattgaatt ttcaaaaaaa tgtgttcgtt ttgaagcaag attaaaacgt
      601 tatttagata aacatcaaat cccacgcaat ttatttgact taattaaata tcagagagat
      661 tacgaagagc agggtagaag cctgattaaa gacctatggc aagacgcatt caaagacatt
      721 attaaggctg tcggggaaag caatatgaat atttacaaca gagatcaaat tcagcgttta
      781 ttacggaaaa attatttttc aatcactcca aaaggaaata tgagctatgc aaaggctgat
      841 cgtttattca gcttttataa gaatttacta agtgatggct atagagaaac gctagattct
      901 atgccaagaa acacattttg gagatatgaa aaggatctta tggccgttgg tttaactaaa
      961 a
//
LOCUS       DANLXD010000220          951 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.221, whole genome shotgun sequence.
ACCESSION   DANLXD010000220 DANLXD010000000
VERSION     DANLXD010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 951)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.221"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            22..>951
                     /locus_tag="PXD18_002612"
     CDS             22..>951
                     /locus_tag="PXD18_002612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlwI family type II restriction endonuclease"
                     /protein_id="HDL6302974.1"
                     /translation="MSNKSIPYQSFCWVIGTTSFRTAKLNLKIEAQLLLLDEFFNEVI
                     KESSWNWNNELQEKYYDFMKDRAFLTGEAKRKDKDAREKTSGLVDIGLITEDRLITDA
                     GRELLKVTSSGDFETNNVFNINRDSFIYLKQLLKTSIDVSGSIVRPFIAVVKCLTELE
                     FLSYDEFTYFVPLIRDDESAKQIISDIKLYREGKILPEEIIYKRLMQMENYKLAQEEF
                     IASDVDENLICLVGMNRKSRNYDKPYYKLYENLKKVFLDGENIYESLLNSAKNINQKP
                     GILWRSLLFKTTNIGVVRKNGKSSIHKQCPFINC"
BASE COUNT          369 a          108 c          189 g          285 t
ORIGIN      
        1 gtgaattgga ggaataagta aatgtctaat aaaagtattc catatcaaag tttttgttgg
       61 gttataggaa ctacaagttt tagaactgca aaactaaatt taaaaatcga ggcacagttg
      121 ttgcttcttg atgagttttt taatgaggtc ataaaggaat caagttggaa ctggaacaat
      181 gaattgcaag aaaaatatta tgattttatg aaagatagag ctttcctaac aggagaagca
      241 aaaagaaaag acaaagatgc cagagaaaaa acatcaggat tggttgatat tggtttaatt
      301 acagaagata gattgattac ggatgcagga agagaactcc ttaaagtaac aagtagtggg
      361 gattttgaaa ccaataatgt gtttaatatt aatagagata gctttatcta tctaaaacag
      421 cttcttaaaa cgagtataga tgtaagtggt agtatcgtta gaccgtttat tgcggttgta
      481 aagtgcctga cggaacttga gtttttaagt tatgacgagt ttacttattt tgttccgcta
      541 attagagatg acgaaagtgc aaaacaaatc atatcggata ttaaattata tcgagaaggt
      601 aaaattttac cggaagaaat aatttataag aggcttatgc aaatggaaaa ctacaaactt
      661 gcacaagaag aatttatagc ctctgatgtt gatgaaaatc taatatgttt agtgggaatg
      721 aatcgtaaaa gcagaaacta tgacaagccg tactataaat tgtatgagaa tttaaagaag
      781 gtatttcttg atggcgaaaa catttatgaa tcgctattaa attctgcaaa gaatataaat
      841 caaaaacctg gaatattgtg gagaagttta ctctttaaaa caaccaatat tggtgttgta
      901 agaaaaaatg ggaagtcttc aattcacaaa caatgcccat ttataaactg t
//
LOCUS       DANLXD010000221          940 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.222, whole genome shotgun sequence.
ACCESSION   DANLXD010000221 DANLXD010000000
VERSION     DANLXD010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 940)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 940)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.222"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..>940
                     /locus_tag="PXD18_002613"
     CDS             <1..>940
                     /locus_tag="PXD18_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302975.1"
                     /translation="KKQWIKEVHKYSKGGFKRCVNIPFFRFSKFFLNNAQRTAFSYVT
                     HYIKKHSYAYSKADNIQELLVKFFSRKQPVMQSAFNHQKRIVKWLWAEFWDKNIISMT
                     LRIDGYRNANLWHYLRYQSRIEVLYKIANEHPNLLPLLAYVKPEYWKCSDLFSYQNWV
                     RSRDKQPFILYAKCQDKMLCESKGQWRWLKKQSRIVVDQCFLHVNQWQLLTEIQMPFK
                     IPVCVICFILTNFSMISCELDRSRQRRLLSIFIQYIYHYWKDNGFRQLKIHLSHLRVL
                     FQDIEDYMIHEGYLHGIPQTWQHLVYHLNLINSNTS"
BASE COUNT          328 a          136 c          162 g          314 t
ORIGIN      
        1 ataagaaaca atggataaag gaagttcata aatattcaaa aggtggattt aagagatgtg
       61 ttaatatccc tttctttaga tttagtaagt ttttccttaa taatgcacaa cgaacagcct
      121 tttcatatgt aactcattac attaagaaac attcctatgc ctatagtaag gcagacaata
      181 ttcaagaatt attagtaaag tttttctcta gaaagcaacc tgttatgcaa agtgcattta
      241 atcatcaaaa aaggattgtt aagtggttat gggctgaatt ttgggataag aatattatct
      301 cgatgacact tagaattgat ggttatagaa atgctaactt atggcattat ttacgttatc
      361 aatcacggat tgaggtattg tataaaatag caaatgaaca cccgaatcta ctaccattat
      421 tagcctatgt taaacctgag tactggaaat gctcggactt atttagttat caaaattggg
      481 taagaagccg tgataaacag ccttttattt tgtatgctaa atgccaagat aagatgttat
      541 gtgaatcaaa ggggcaatgg agatggttaa aaaaacagtc gagaatagtt gtagatcaat
      601 gttttctaca tgttaatcaa tggcagttat taacagaaat tcaaatgcct ttcaagatcc
      661 cagtatgtgt catatgtttc atacttacta attttagcat gatcagctgt gagttagatc
      721 gatctagaca acgtcgatta ctctctattt ttattcaata tatctatcat tattggaaag
      781 ataatgggtt tagacaatta aagatacatc tttctcatct gagagtgctt tttcaagata
      841 ttgaagatta catgatacat gaggggtatt tacatggtat acctcagact tggcaacatt
      901 tggtttacca cctcaacctt ataaattcaa atacatcaaa
//
LOCUS       DANLXD010000222          927 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.223, whole genome shotgun sequence.
ACCESSION   DANLXD010000222 DANLXD010000000
VERSION     DANLXD010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.223"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            46..672
                     /locus_tag="PXD18_002614"
     CDS             46..672
                     /locus_tag="PXD18_002614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDL6302976.1"
                     /translation="MTKIKFYGNLKKFGSEFSLEVKDTAEAIRALCTQISGLREALRD
                     GVYKVRIGKQYLDPSALEKGLFYCLKKGQTIHFTPVIKGAKSGGVFNFVLGAALIGAA
                     FFTGGASIAAWGAGAKMMGMLGASMLLGGVSQMLTKMPKAPTMGNETEKESSTAFSNL
                     NNLVTQGKPVPLAYGLIRTGSLVISQGVETITIKENQPASNKKTGFRK"
     gene            721..>927
                     /locus_tag="PXD18_002615"
     CDS             721..>927
                     /locus_tag="PXD18_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6302977.1"
                     /translation="MNLTKAESNLNAKITEEKKARVDADKVNADKLTDITSRVANAES
                     TITNFQSTKANKSEVASLAQSSLQA"
BASE COUNT          307 a          173 c          210 g          237 t
ORIGIN      
        1 gaacataaat cccctttatt ttggctataa ttgtaatggt gagtcatgac taaaattaaa
       61 ttttacggca atttaaaaaa atttggtagt gaatttagct tagaagttaa agatactgcc
      121 gaagctatcc gagccttatg tacacagatt agcggattgc gtgaggcatt acgagacggt
      181 gtttataaag tccgtatcgg caaacagtat ttagacccgt cagcccttga aaaagggctt
      241 ttttattgtc tgaagaaagg gcaaaccatt cattttaccc ctgttatcaa aggagcgaaa
      301 agcggtggcg tgtttaattt tgttttaggt gcagccttga tcggagccgc attttttact
      361 ggcggtgctt ctattgcggc ttggggagct ggagcaaaaa tgatgggtat gttaggggct
      421 tcgatgttac taggaggagt ttcccaaatg ctcaccaaaa tgccaaaagc ccccacaatg
      481 ggtaatgaaa cagaaaaaga aagctcaacg gctttttcaa atttaaataa cttggtgact
      541 caaggcaaac ctgtgccgtt ggcttatggc ttaattcgga ccggctcgct tgtgatatcg
      601 cagggagttg agacgatcac cattaaagaa aaccaaccgg caagcaacaa gaaaacaggc
      661 tttagaaaat aagggataat taccgattca gcacaagcac agcaacttaa tcagttatct
      721 gtgaacttga ccaaagcaga gagcaattta aatgccaaaa tcacggaaga aaaaaaagct
      781 cgtgttgatg cagataaagt gaatgcagat aaactcacag acataacaag ccgtgttgca
      841 aatgcggaat caactattac caatttccaa tcaaccaaag cgaataaaag tgaggttgcg
      901 agccttgcac aaagttcgtt gcaggca
//
LOCUS       DANLXD010000223          890 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.224, whole genome shotgun sequence.
ACCESSION   DANLXD010000223 DANLXD010000000
VERSION     DANLXD010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 890)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 890)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..890
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.224"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            43..>890
                     /gene="msrA"
                     /locus_tag="PXD18_002616"
     CDS             43..>890
                     /gene="msrA"
                     /locus_tag="PXD18_002616"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005546455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDL6302978.1"
                     /translation="MKYNQLLLCLVSAIFTTSSIANITTPNEMRSENLQDIYLAGGCF
                     WGIEAYMEKIYGVKEATSGYANGKTEQTAYRIIGQTDHAETVHVTYDANKISLEKLLQ
                     YYFKVIDPTSKNKQGNDIGRQYRTGIYYQNEQDKQIILKEIQAQQAKYKQKIQVQVEP
                     LKHYILAEEYHQDYLKKNPNGYCHIDLNQANSIIIDPKDYPKPSDATLKMKLTPLQYS
                     VTQRKNTERSFSNEYWDNTAPGIYVDITTGEPLFSSLDKYDSGCGWPSFTKPIINEVV
                     NYTEDN"
BASE COUNT          339 a          163 c          152 g          236 t
ORIGIN      
        1 tccttaaaaa ataaaattac ataagttata aaggagaact ggatgaaata caatcaactg
       61 ttactatgtt tggtgtctgc tatctttacc acctcctcaa tagcaaacat cacaacccct
      121 aacgagatgc gatctgaaaa cttacaggat atttacttgg caggaggatg tttctggggc
      181 attgaagcct atatggaaaa aatatatggc gtaaaagagg ctacatcggg ctatgccaat
      241 ggcaaaactg agcaaactgc ttaccgaatt atcgggcaaa ccgatcatgc agaaacagtt
      301 cacgtgacct atgatgctaa taaaatttct ttagaaaagc tgttgcaata ttactttaaa
      361 gtaattgatc caaccagtaa aaataaacaa ggtaatgata ttggccgcca atatcggaca
      421 ggtatttatt atcagaatga gcaagataaa caaattattt taaaagaaat acaagctcaa
      481 caagcaaaat acaaacaaaa aatacaagtg caagtagaac cattaaaaca ttatattttg
      541 gcagaagagt atcatcagga ttacctaaag aaaaatccaa atggctactg ccatattgat
      601 ttaaaccaag ccaacagcat tattatcgat ccgaaagatt atcctaaacc tagtgatgca
      661 acattaaaaa tgaaattaac gcctttgcaa tatagcgtta cccaacgtaa aaatactgag
      721 cgttcattca gcaatgaata ttgggataat accgcaccgg gcatttatgt tgatataact
      781 acaggagagc ctcttttttc atctctcgat aaatatgact ccggctgtgg ctggccaagt
      841 tttaccaaac caattatcaa tgaggttgtt aactataccg aagataatag
//
LOCUS       DANLXD010000224          833 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.225, whole genome shotgun sequence.
ACCESSION   DANLXD010000224 DANLXD010000000
VERSION     DANLXD010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 833)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 833)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.225"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..601
                     /locus_tag="PXD18_002617"
     CDS             <1..601
                     /locus_tag="PXD18_002617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6302979.1"
                     /translation="EFIKKEKWKLSFVKVQQKPFLENVISEADYTYFKKCLKKDNELY
                     WYFVIRFMAATGSRVSELIQIKCEHIKIGYLDLYSKGGKLRRIYIPKSLQKECSEWLR
                     LNNKHNGFIFLNKYGDRITTRGIASQLKVFARRYKLDPKIVYPHSFRHRFAKSFLERF
                     NDIAFLADLMGHESIETTRIYLRKTSTEQQEIVNKIIDW"
     gene            complement(647..>833)
                     /locus_tag="PXD18_002618"
     CDS             complement(647..>833)
                     /locus_tag="PXD18_002618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL6302980.1"
                     /translation="KYFCYYLNALNLPSMGLINGIAVPKLNQRNLNSILIAIPPISEQ
                     HRIVEKIEKLFSEIEKF"
BASE COUNT          307 a          106 c          134 g          286 t
ORIGIN      
        1 ggaatttatt aaaaaagaaa aatggaaatt atcctttgtt aaagttcaac aaaaaccatt
       61 tttggaaaat gtaattagtg aagctgatta tacttatttt aaaaaatgcc taaaaaaaga
      121 taacgaacta tactggtatt ttgtgattcg ttttatggca gcaacaggtt cgagagtaag
      181 tgaattaatc cagataaaat gtgaacatat taaaataggc tatttagacc tctattctaa
      241 aggtggaaaa ttaagacgaa tttacatccc aaaatctctg caaaaagagt gttctgaatg
      301 gttgagatta aataataagc ataatggatt tattttctta aataaatatg gtgatagaat
      361 tactactcgt ggcattgcca gccaattaaa agtatttgct agacgctata aattagatcc
      421 taaaattgtt tatccacatt catttcgcca tcgttttgca aaaagttttt tagaacgatt
      481 taatgatatt gcttttcttg ctgatttaat ggggcacgaa agcatagaaa ccacaaggat
      541 ctatttacga aaaacaagca cagaacagca ggaaattgtg aataaaatta ttgattggta
      601 atttttaagg ggcgtgtttc acacgccctt ggacatataa gtttttctaa aatttctcta
      661 tttccgaaaa taatttttca attttttcaa cgattctatg ttgttcagaa ataggtggaa
      721 tagcaattaa aatagagttt aggtttcttt gatttaattt gggtacagct attccgttaa
      781 ttaatcccat actaggtaaa tttaatgcat ttaaataata acaaaaatat ttt
//
LOCUS       DANLXD010000225          810 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.226, whole genome shotgun sequence.
ACCESSION   DANLXD010000225 DANLXD010000000
VERSION     DANLXD010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 810)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 810)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.226"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..>810
                     /locus_tag="PXD18_002619"
     CDS             <1..>810
                     /locus_tag="PXD18_002619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302981.1"
                     /translation="DKGTKLASSQVYNQADGKLYTWNGTAYSATVAAEDVTGKLSKSK
                     IDTSLISQLTGADNTANLARRLAETAQSNINQEITNRQDAVTAEANNRTKAIQAESAN
                     LTKKIQAEATARGAAVTQLQNVDAQQAQLISAVTAKANNALSGLEEEKTARANGDKAE
                     SQAREALTARMGAAESNIVTIQRTVANNAQSISEVSQNLNAKIDNINIGGRNLLRDSE
                     FNAYNKWGSPQIEFAENANRRTIKVTSTGTNGPVGIVSSNRHSTSYFQQGET"
BASE COUNT          292 a          168 c          166 g          184 t
ORIGIN      
        1 gacaaaggta ctaaactggc gtcatctcaa gtttacaatc aggctgacgg caagctctat
       61 acttggaacg gtacagcata ctcagctaca gtggctgcgg aagatgttac cggcaaatta
      121 tcaaaatcta aaattgatac gtcccttatt tcgcaattaa caggtgcaga taacaccgca
      181 aatttggcaa gaagattagc ggaaacagct caaagcaaca ttaaccaaga gattactaac
      241 cgacaagatg ccgttactgc cgaagcaaat aaccgtacta aagccattca agccgaaagt
      301 gcgaatttaa cgaaaaaaat tcaagctgaa gcaaccgctc gtggggctgc tgttacacag
      361 ttacaaaatg ttgatgctca acaagcacaa ctcatttctg ctgtcacagc aaaagctaat
      421 aatgctctat caggcttgga agaggaaaaa acagcacgag caaacggcga taaagcggag
      481 tctcaagcac gtgaagcatt aacagcaaga atgggagcag ctgaaagcaa tatcgtaact
      541 attcaacgta cggtagcaaa taatgcccaa agcattagtg aagtcagtca gaatttaaat
      601 gctaagattg ataatattaa tatcggcggt cggaatttat taagagacag cgagttcaat
      661 gcgtacaata aatggggtag tccacaaatt gaatttgctg aaaatgcaaa tcgccgaact
      721 atcaaagtaa cctcaacagg tactaacggt cctgttggta ttgtttcatc taatcgccat
      781 tccacatctt atttccaaca aggagaaact
//
LOCUS       DANLXD010000226          810 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.227, whole genome shotgun sequence.
ACCESSION   DANLXD010000226 DANLXD010000000
VERSION     DANLXD010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 810)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 810)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.227"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            43..714
                     /locus_tag="PXD18_002620"
     CDS             43..714
                     /locus_tag="PXD18_002620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HDL6302982.1"
                     /translation="MKKSTLAIILGGALLTGTAVAHQAGDVIFRAGAVHVKANSSSDA
                     KSKAATGIDVDLEVKNNTQLGLTATYMLADNVGIELLGATPFSHKINAKAKVLESGAE
                     VDLDRVVILKQLPPSLYAQYYFFELTAKVKPYVGAGLNYTRFYHAKSVSPAVTDLSVK
                     KHSFGPVANLGVDVKLTDNIYFNAAAWYTRIKTTAKFKAAGADHEVKVKLDPVVLFAG
                     FGVKF"
BASE COUNT          257 a          138 c          162 g          253 t
ORIGIN      
        1 tacctcatta taggtattct aattattttt gaggatatga aaatgaaaaa atcaacttta
       61 gcaattattt taggtggggc attattaact ggaactgcgg tggcacatca agcaggtgat
      121 gtgatattcc gtgccggtgc ggtacatgtt aaggcaaatt caagttcaga tgcaaaatca
      181 aaagcagcga caggtattga tgtagattta gaagtgaaaa acaatactca gttaggctta
      241 actgcaactt atatgttagc cgataatgtg ggtattgagt tattaggtgc aacccctttc
      301 tctcataaaa ttaatgccaa agccaaagtt ttagaatcag gtgcagaagt agatttggat
      361 agagttgtta tcttaaaaca attaccaccg agcctttatg cccaatacta tttctttgag
      421 ctaactgcaa aagtaaaacc ttacgttggt gcaggtttaa attacactcg cttctaccac
      481 gctaaatcag ttagccctgc tgttactgac ttaagtgtaa aaaaacattc tttcggaccg
      541 gtagcaaacc taggtgttga tgtaaaatta accgataaca tctacttcaa cgcggcagct
      601 tggtacacac gcattaaaac aaccgcaaaa tttaaagcag caggtgcaga tcacgaagta
      661 aaagtaaaac ttgatccggt tgtcttattt gccggtttcg gggtgaagtt ctaattattt
      721 gttgggaacg agttgggcta atcttagtga ttagtccttt tttgttaaag ttgtttgaat
      781 atagcccttt ccacttttaa ttaaataatt
//
LOCUS       DANLXD010000227          794 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.228, whole genome shotgun sequence.
ACCESSION   DANLXD010000227 DANLXD010000000
VERSION     DANLXD010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.228"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..626
                     /locus_tag="PXD18_002621"
     CDS             <1..626
                     /locus_tag="PXD18_002621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDL6302983.1"
                     /translation="NTVLNTLQCDYVLFSSEDNYQVIINLKKADYPKNEANFITMTLN
                     KKFGDAKFSGANHYLRCASFFNKKSTNNNEKSVLVDFTNTKTEEDNKCYFDNLLSSYK
                     NNNVKLEPLDIKIIDELGDDKAVIAQKEIQAEIALCKRIFKQLDWSAVDFRIVKRLYR
                     KGFSENEIAVALVRFTDFEDRHCDSHDYLTRTITKAIQNYQQCSKAC"
BASE COUNT          318 a          118 c          127 g          231 t
ORIGIN      
        1 taaacacagt tttaaacaca ctacaatgcg attatgtgct gttttcttct gaagacaact
       61 accaagtcat catcaatcta aaaaaagctg attaccccaa aaatgaagca aatttcatta
      121 caatgacttt aaacaagaaa tttggtgatg caaaattttc cggtgcaaac cattacttaa
      181 gatgtgccag cttcttcaac aagaaaagca caaacaacaa tgaaaaatca gttttagttg
      241 attttacaaa cacaaagaca gaagaagaca ataaatgtta ttttgataac ttattatcta
      301 gttataaaaa taacaatgta aaacttgagc ctttagacat caaaattatt gatgagcttg
      361 gagatgataa agcagttatt gcacaaaaag aaattcaagc agaaattgct ttgtgtaaac
      421 gtatattcaa acaattagat tggtctgctg ttgattttag aattgttaag cgtctgtaca
      481 ggaaaggatt ttcagaaaat gaaattgctg ttgcacttgt cagatttact gattttgaag
      541 acagacattg tgattcacat gattatttga caagaacaat cacaaaagcc attcaaaact
      601 atcaacaatg ctcaaaagct tgttagatgt tataaggaaa gttaaaaatc aacaaaagat
      661 ttgacaaatt tatataaaat ccttattata tatgaaaagg aagcgtagcc ttaaaacgca
      721 aatgtgggtt agcacatggt caatctgaaa ctaatctagg atatttaagg tctagcagat
      781 ggcaagcatc agaa
//
LOCUS       DANLXD010000228          770 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.229, whole genome shotgun sequence.
ACCESSION   DANLXD010000228 DANLXD010000000
VERSION     DANLXD010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 770)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 770)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.229"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..721
                     /locus_tag="PXD18_002622"
     CDS             <1..721
                     /locus_tag="PXD18_002622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HDL6302984.1"
                     /translation="EVNHNKFKAKIALQGAQLLSWQPYNAEQDVLWLSEIEPFRIGSA
                     IRGGIPICYPWFGSIKEPAHGTARIQEWRLVEHTCSDENVGLVFALENKAKMEMMLGE
                     TCELYFTHLDPEPAQLALHSYFNIGDIEKVEVQGLPTRCFDKLTDQEVEVPSPRKISE
                     NVDCIYPAQAVNFIQDFANQRTIKVEHINATETVLWNPWHNTVSAMTETAYQNMVCVE
                     TARINTLLQQNETLGVRVLVR"
BASE COUNT          246 a          127 c          177 g          220 t
ORIGIN      
        1 agaagttaat cacaataaat tcaaagctaa aattgcatta caaggagcac aattgctaag
       61 ttggcagccg tataatgcag agcaagatgt gctgtggtta agtgagatag aaccgtttag
      121 aattggctct gcgattcgtg gcggtatacc aatttgttat ccgtggttcg gttcaataaa
      181 agagcctgcc cacggcacag ctcgcattca agaatggcgt ttagttgagc atacttgttc
      241 tgatgaaaat gtcggtttgg tatttgcctt agagaataaa gcgaaaatgg aaatgatgtt
      301 aggcgaaact tgtgagttat attttaccca tttagatcca gaaccagcac aactggcatt
      361 gcactcttat tttaatattg gtgatattga aaaagtggaa gtgcaaggct tgccaactcg
      421 ctgttttgat aagctaaccg atcaagaagt tgaagtgcca tcacctcgca agataagtga
      481 aaatgtggat tgtatttatc cggcacaagc ggtgaatttt attcaagatt ttgcaaatca
      541 gcgcaccatt aaagttgagc atattaatgc gaccgaaacc gtactttgga atccttggca
      601 taataccgtt agtgcgatga cagaaacggc gtatcaaaat atggtatgtg tggaaaccgc
      661 tcggataaat actctacttc aacaaaatga aacgctagga gtgagggttt tagtgcgata
      721 gtgtttaatg agagcaagca gctgaattag taatattgtt tacaaattta
//
LOCUS       DANLXD010000229          757 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.230, whole genome shotgun sequence.
ACCESSION   DANLXD010000229 DANLXD010000000
VERSION     DANLXD010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 757)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 757)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.230"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            276..>757
                     /locus_tag="PXD18_002623"
     CDS             276..>757
                     /locus_tag="PXD18_002623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF551 domain-containing protein"
                     /protein_id="HDL6302985.1"
                     /translation="MNEEKYFSVDVSDETHVIRLHETLEQAKQSCLNGATEAYEFAGD
                     MDDHESYESYEAYDLPYAVYGVVLGRAKSDIRPLTDEERASELFGEAEQVIEPPTLLE
                     NNGWISIEDKLPPIETDVLGLCDISGMQLILIVSRELADNEWYFLSVNQYGLDDDVIA
                     V"
BASE COUNT          254 a          124 c          170 g          209 t
ORIGIN      
        1 gcagtaacat tgacgttacc ttgcccatta aaagaacctc aagaaaatat gtggtttatt
       61 gacaatgatt ttaccatagt aaaatctatg ttcgcaaatg ccccctttgt aaaaaaattc
      121 ttgccacaag ggcgatgttt cgcttcagaa gaagacgctc aagaatggtt agatgcaatg
      181 cgaaatagtc gtaggtaaat cggcagcact aacagctgaa tgctgctgtt gaatttcttg
      241 tatatccaca taaacacgga acgcggagaa agaaaatgaa tgaagaaaaa tatttttcgg
      301 tcgatgtctc ggatgagaca catgtaataa ggttgcacga aacattagag caagcaaaac
      361 aaagctgttt aaatggtgct actgaagcct atgagtttgc gggtgacatg gatgatcacg
      421 aaagctatga aagctatgaa gcctatgatt taccctatgc agtttatggt gttgttttag
      481 gtagagcaaa atcagatatt cgtccactaa cagacgaaga aagagcatcg gagttatttg
      541 gggaagctga acaagttatt gaaccaccaa cacttttaga aaacaacggc tggatttcca
      601 ttgaggacaa attaccacct attgaaacgg atgtgctagg gttatgcgat atttcaggaa
      661 tgcagttaat tttaatagtt tcaagagaac ttgccgataa cgagtggtat tttcttagtg
      721 taaatcaata tgggcttgat gacgatgtga ttgcagt
//
LOCUS       DANLXD010000230          717 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.231, whole genome shotgun sequence.
ACCESSION   DANLXD010000230 DANLXD010000000
VERSION     DANLXD010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 717)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 717)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.231"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
BASE COUNT          251 a          146 c           88 g          232 t
ORIGIN      
        1 gtacatctat aactttcaca aaaataacag gcaatactat aactaatatc aaaatagaaa
       61 aatccaccat actttctcca ttaaagtatt tcaacttact ttatacatta ctttaattgc
      121 atcttcagaa agtaaatcac aacgaggtaa tacttcattg atagccttcc aagaaagtaa
      181 atcttgctac tctatagcac ctttcattaa aagtggttgt ttctcagaat aactttcacg
      241 aaattcttga taagaaattg gaaattgaat tttcattttc atctccacta gccttgataa
      301 tctgtaccat caccacaatc gtagtttgag ccagattggt tattattcgt tctacctgga
      361 actccaaacg taggctttat tggtaaagat gatggaatta attcttttac accgctaggt
      421 aaagaatttt catgtattgt aataggtagg ctcctcgcta aatcaagggc taaattaaca
      481 gaagtactgg ataaaccgcc taaagccccc ctcttgcaaa ccctgtagca aaagcaacgc
      541 cataagatac aagatctggt tgattagcct tattttcaga attccctcca actactaagc
      601 ttaattgtaa aattgatggt tctttcattt cattctccct ttaatctaat tctgatcaca
      661 aaaaccaata ttaaaaataa ttctaaaaat aatactatac ttacaacatc ttccaca
//
LOCUS       DANLXD010000231          700 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.232, whole genome shotgun sequence.
ACCESSION   DANLXD010000231 DANLXD010000000
VERSION     DANLXD010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 700)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.232"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..>700
                     /locus_tag="PXD18_002624"
     CDS             <1..>700
                     /locus_tag="PXD18_002624"
                     /inference="COORDINATES: protein motif:HMM:NF019552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HDL6302986.1"
                     /translation="DVNNFVAGSLKFLAYAIKPNGFLPIIGDTEEKQIDNLSHLSNQH
                     NYEEFLYAQSKGTQGKPLNKIGCAFEESGYFFIKTNYPNIPCKEQFYLAAKSGFLSKY
                     HRQDDDCHFVLSAYGEDWLIDGGLYKHEHHDPIREYMRSRYSHNLLMPKDNVSIERQT
                     PPNKEKQKKLGLTNWLNAGSIIRAELSTDMFSSFEYKRNFNYYDCYKLNIVDTIKNIS
                     SNNTGIFQLVYHFPN"
BASE COUNT          252 a          109 c          117 g          222 t
ORIGIN      
        1 gatgtaaata attttgtagc aggtagtttg aagtttttag cttatgcaat aaaaccaaat
       61 ggttttttac ctataattgg cgatacggaa gaaaagcaaa ttgacaacct atctcatctc
      121 tccaatcagc ataattatga agaattttta tatgctcaaa gtaaaggtac acaaggtaaa
      181 cctttaaata aaattggatg tgctttcgag gaatcaggat atttttttat aaaaacaaac
      241 tatcctaata ttccttgcaa agagcaattc tatttagcag ctaaaagtgg ttttttaagt
      301 aagtatcatc gccaagacga cgattgccat tttgtcttat ctgcttatgg cgaagactgg
      361 ttgattgatg gaggattgta taaacacgaa caccatgatc ctattcgaga atatatgcgc
      421 tccagatata gccacaacct attgatgcct aaagataatg tgtctattga gagacaaaca
      481 cctcctaata aagaaaaaca aaaaaaatta gggcttacta attggcttaa tgcaggtagt
      541 attattaggg ctgaattatc cactgacatg tttagtagtt ttgaatacaa acgaaatttt
      601 aattactatg attgttacaa actaaatatc gtagacacta ttaaaaatat ttctagtaac
      661 aatacgggca tatttcagct ggtataccat ttcccaaatg
//
LOCUS       DANLXD010000232          688 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.233, whole genome shotgun sequence.
ACCESSION   DANLXD010000232 DANLXD010000000
VERSION     DANLXD010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.233"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..446)
                     /locus_tag="PXD18_002625"
     CDS             complement(<1..446)
                     /locus_tag="PXD18_002625"
                     /inference="COORDINATES: protein motif:HMM:NF016343.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF551 domain-containing protein"
                     /protein_id="HDL6302987.1"
                     /translation="MNEDKFFSVDVSNDIHILNLHETLEQAKQSCLNGATEAYEFADD
                     MDDHESYEAYDLPYAVYGVVLGRAKSDIRPLTDEERESELFGEAEQVIEPPTLVENNG
                     WISVKDRLPEIRKEVLITNNFIMIAQFNGESWFKPGGFLGIQPVYGV"
BASE COUNT          201 a          144 c          114 g          229 t
ORIGIN      
        1 acaccataga caggctgaat acctaagaat ccacccggct tgaaccagct ctcgccattg
       61 aattgagcaa tcataataaa attgtttgtt atcaagactt ctttgcggat ttctggcaat
      121 ctgtctttga ctgaaatcca gccgttgttt tctacaagtg ttggtggttc aataacttgt
      181 tcagcttccc caaataactc tgattctctt tcttcatcgg ttagtgggcg gatatctgat
      241 tttgctctac ctaaaacaac accataaact gcatagggta aatcataggc ttcatagctt
      301 tcgtgatcat ccatgtcatc cgcaaactca taggcttcag tagcaccatt taaacagctt
      361 tgttttgctt gctctaaggt ttcgtgcaga tttaggatat gtatatcatt tgatacatcc
      421 accgaaaaaa atttgtcttc attcattttc tttctccaaa ataccaatag ttgagagaat
      481 aataagcata ctatctcatg ctattcttaa gtgcatctaa ccacgctcca gcatcttcgg
      541 ctgaagcgaa atataaccct tgatcaaata gtttttctat ataagaatgt gtagggaaat
      601 ttgattttat cacattgaaa ttatcgccaa taaaccacat tccatctctt ggttctttta
      661 atggacaagg aagagtgaga gttactgt
//
LOCUS       DANLXD010000233          651 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.234, whole genome shotgun sequence.
ACCESSION   DANLXD010000233 DANLXD010000000
VERSION     DANLXD010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.234"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..>651
                     /locus_tag="PXD18_002626"
     CDS             <1..>651
                     /locus_tag="PXD18_002626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDL6302988.1"
                     /translation="ELLSLEGFKMKVVHNGLEGLNELESNQYDLVLLDVMMPVLSGVK
                     TLKRIRQKYSLPVLMLSARDDQIDRILGLELGADDYVPKPFNNRELVARMKAILRRTT
                     SRPASTDHSEQNYTENISKSLQFAGVELHSGRQQAYYQGCDLDLTGTEFALLQMLMRN
                     SGEILSRELLSLKILGKNLTPYDRAIDMHISNLRKKLPEREDGLPWFKTLRGRGYL"
BASE COUNT          224 a           95 c          130 g          202 t
ORIGIN      
        1 ctgaattact ttcattagaa ggatttaaaa tgaaagttgt gcataatggt ttagaaggct
       61 taaatgagtt agagtctaat caatatgatt tagtattact agatgtgatg atgccggtat
      121 taagtggcgt gaaaacatta aaacgtatac gacaaaaata ctcattaccc gttttaatgt
      181 taagtgcaag agatgatcaa attgatagaa tcttaggttt agaattaggg gctgacgatt
      241 atgtaccgaa accttttaat aatcgtgaac tagtcgctag aatgaaagcg atacttcgaa
      301 gaacaacctc tcgcccagct tcaacagacc attctgaaca gaattatact gaaaacatct
      361 ctaaatcatt acaatttgcc ggagttgaat tacattcagg acgtcagcag gcttattatc
      421 aaggatgtga tcttgattta acggggactg aatttgcatt attacaaatg ttaatgcgaa
      481 actcagggga gattttgtcc agagaattat tgagtttaaa aattttaggg aaaaatttaa
      541 cgccttatga tcgtgcaatt gatatgcata tttctaatct tcgtaaaaaa ttacccgaac
      601 gggaagatgg attaccttgg tttaaaacct taagaggtcg gggttactta t
//
LOCUS       DANLXD010000234          647 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.235, whole genome shotgun sequence.
ACCESSION   DANLXD010000234 DANLXD010000000
VERSION     DANLXD010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.235"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
BASE COUNT          206 a           94 c          111 g          236 t
ORIGIN      
        1 aaaaaattaa tgattaatcc cttcttgttt ggatagttac tctatttttg aagaacattc
       61 cgtattttta atgatgtttt ataagcagga tataaaattt ttaatatttc aaataaaaag
      121 tgagctaaaa aagattttaa ctcactttca tttcgtaggc tcaaattaga cctactacgc
      181 cgatataaaa agttggtctt tttatatcaa agctaagctc ttaacaacga gtagtagatt
      241 ctctaatatg tttagctgta actttcattg gcttttgttg cgctgtagtg tttttcatat
      301 tgttctccag attttgtgag taattagtaa gaccttttct tttgaaaagg accgagcttt
      361 caaagtggtc tgattaccta ttgagcaatc agcttgcttt tcaagcccca tgtcattata
      421 tcataaccat tgtttttagt caataccatt ttggggaatg catggaaggc gagtacaaat
      481 tgaaggctga tgtcacgatc tatcatgata cgccttatac aaaagttctc tttggaagta
      541 catatattga gattttagac gatgaccagt attacttttc gattttagaa aaacgaagat
      601 ggaagttaga aaatttacct gatgaattag ttgatgtact aaaagag
//
LOCUS       DANLXD010000235          644 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.236, whole genome shotgun sequence.
ACCESSION   DANLXD010000235 DANLXD010000000
VERSION     DANLXD010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 644)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.236"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..>644
                     /locus_tag="PXD18_002627"
     CDS             <1..>644
                     /locus_tag="PXD18_002627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL6302989.1"
                     /translation="EIEQTRAAYDRLKRSGVASQNELRRASEATKQRVRELNAELGKT
                     SFGDKAKGFGRGLMSAGVGIAAGAAMARQPAKNQMEFDRQLAMASNTAFSDRDVKGRI
                     EGKKELLAAVQEAVKVGGGTKEDALLTLDTLIASGTMKAETAMSLLPTLQKGAVATGA
                     SSEDMAKIAISSMQQFGIKEEDIGRALDMAVAAGQAGNFELADMARWLPQQMAAG"
BASE COUNT          184 a          129 c          190 g          141 t
ORIGIN      
        1 gaaattgaac aaactcgtgc agcctatgac cgcttaaaac gctcaggtgt tgcctctcaa
       61 aatgagctac gccgtgcctc agaagccact aagcaacggg tgcgagagct gaatgcagaa
      121 ttgggtaaga caagctttgg ggataaggct aaaggatttg ggcgtggttt gatgagtgcc
      181 ggtgtcggta ttgcagcagg tgctgcaatg gctcgtcagc cagccaagaa ccaaatggag
      241 tttgaccgac agttagcgat ggcatcaaac actgcctttt ccgaccgtga tgttaaaggg
      301 cgtattgagg gcaagaaaga gttattagca gcggtgcaag aggcggttaa ggttgggggt
      361 ggaacaaaag aagatgctct tttaactctt gatacgctaa ttgcctcagg aacgatgaag
      421 gctgaaactg caatgagcct attaccaacc ttgcagaaag gtgctgtagc aacaggtgca
      481 agctccgagg atatggcaaa aattgcgatc tcctcaatgc aacaatttgg gattaaagaa
      541 gaggatattg ggcgggcatt ggatatggca gttgcagccg ggcaagcagg taactttgag
      601 cttgcagata tggctcgctg gctaccacaa caaatggccg cagg
//
LOCUS       DANLXD010000236          643 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.237, whole genome shotgun sequence.
ACCESSION   DANLXD010000236 DANLXD010000000
VERSION     DANLXD010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.237"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..493
                     /locus_tag="PXD18_002628"
     CDS             <1..493
                     /locus_tag="PXD18_002628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6302990.1"
                     /translation="ARPLNTLEVKGLTVVDDSQKPLFSEVNQALYHGLSPIEVVASRV
                     QITRAITTYTKNVTNTDDPSYLDLTTIRTLDYVRKAIQTRQRLRFPRAKNSHRIVAKV
                     RSEILDVLYQLEGEEVIENVEAWKNRLLVVRNQDPTYLDLEIPADVVNGLHVIRNKIT
                     LIL"
     gene            504..>643
                     /locus_tag="PXD18_002629"
     CDS             504..>643
                     /locus_tag="PXD18_002629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6302991.1"
                     /translation="MSIVYEGSCVLEVDGVEIEITKLDVKTVTGRKLVKTMNSSGRAR
                     GYS"
BASE COUNT          182 a          127 c          160 g          174 t
ORIGIN      
        1 ggctcgcccg ttaaataccc ttgaagttaa aggcttaacg gtcgtagatg actcgcagaa
       61 accgttattt agcgaagtaa accaagcgtt atatcacggt ttaagcccga ttgaggtggt
      121 ggcaagccgt gtgcagatta cccgtgcgat tactacatac accaaaaacg tgacgaatac
      181 tgatgaccca agctatttgg atttaaccac cattcgtacg cttgactatg tgcgtaaggc
      241 aatccaaacc cgtcagcgtt tgcgtttccc tcgtgcgaaa aactcccacc gtattgtggc
      301 aaaagtacgc tcggagattt tagatgtgct ttatcagctt gagggcgaag aggtaatcga
      361 aaatgtggaa gcgtggaaaa atcgcttatt agtggtgcgt aatcaagacc cgacttactt
      421 ggatttagaa atccctgcgg atgtggttaa tggcttgcac gttattcgta acaaaattac
      481 gttaatttta tagggggtgc tagatgtcaa ttgtttatga aggctcttgc gtgcttgagg
      541 tagatggcgt tgagattgaa attaccaaac ttgatgtaaa aaccgtaacc ggtcgcaagc
      601 tggttaaaac gatgaacagt tccggacgtg caagaggtta ttc
//
LOCUS       DANLXD010000237          634 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.238, whole genome shotgun sequence.
ACCESSION   DANLXD010000237 DANLXD010000000
VERSION     DANLXD010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 634)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.238"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..296
                     /locus_tag="PXD18_002630"
     CDS             <1..296
                     /locus_tag="PXD18_002630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302992.1"
                     /translation="DTRYNKNGQGAVSERNIIDAKNRFKASHPYAKIISCVRGSETYV
                     TRPAKANATTKSVKEKQSQPQESSSLSSMLLGAAVTAGVGFVANKWFSKKDNT"
     gene            324..>634
                     /locus_tag="PXD18_002631"
     CDS             324..>634
                     /locus_tag="PXD18_002631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302993.1"
                     /translation="MAGLLPPYFKKKNSDHYKDAVKQFGKEQVDEVIAQCDELESWVK
                     EMPTKQLIMYVGCFHTFNKLSQSKAYVQENFPNVLENPFLFQTLSAASHNELKINRGY
                     K"
BASE COUNT          233 a          104 c          115 g          182 t
ORIGIN      
        1 cagataccag atataacaag aatgggcaag gtgctgtttc tgaaagaaat attatagatg
       61 ctaaaaatcg ttttaaagcg agccatccat acgcaaaaat tatttcttgt gttagagggt
      121 ctgagacata tgtaacacgt ccagcaaaag ctaatgctac aacaaaatct gtcaaggaaa
      181 agcaatctca accacaagaa agttcatcgc tcagttcaat gttacttggt gcggctgtaa
      241 ctgctggggt tggttttgta gccaataaat ggtttagcaa aaaagataac acttaattta
      301 tctctaacca atgtggagta aaaatggctg gattattacc accttatttc aaaaagaaaa
      361 atagtgatca ctataaagat gctgtaaaac aatttgggaa agaacaagtt gatgaggtta
      421 tagcacagtg tgatgaactt gaatcttggg taaaagaaat gccaacaaaa caacttatta
      481 tgtatgttgg ttgtttccat acttttaaca aattatctca atctaaagct tatgttcaag
      541 agaactttcc aaacgtactg gaaaacccgt ttcttttcca aacactttcg gcagcgtctc
      601 ataatgaact taaaataaat cgaggatata aatt
//
LOCUS       DANLXD010000238          631 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.239, whole genome shotgun sequence.
ACCESSION   DANLXD010000238 DANLXD010000000
VERSION     DANLXD010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 631)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.239"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(35..>631)
                     /locus_tag="PXD18_002632"
     CDS             complement(35..>631)
                     /locus_tag="PXD18_002632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302994.1"
                     /translation="FEKGFFNFFPEFITILGTGAFNGFLDFPSLVGKVFPEIIDTINE
                     GLDLDIAIENFEVLSQEEMTECMGLYEQALIKKAEEGEIGLLNVDEINSFYEDNSELI
                     LLAKQPMVEEIIPKPDSKASSAILKFFDSNSNILIAKLKESGLQLSAVALQNDQNIAR
                     VANVVYNLLPGMVRIFVSYDTVENFLLNNRQWLINKLV"
BASE COUNT          207 a          127 c           81 g          216 t
ORIGIN      
        1 ttatattgtt tatccatagt tcttcccctc caaattaaac taatttatta atcaaccatt
       61 ggcggttatt taataagaaa ttttctacgg tatcgtaact tacgaaaatt cttaccatgc
      121 ccggcaataa gttataaacg acatttgcta ctcgtgcgat attttggtcg ttttgtaatg
      181 ccacagcact taattgcaaa ccactttctt ttaatttagc aattaagata tttgagtttg
      241 aatcaaagaa ttttagaatt gcagaggagg ctttgctatc tggtttaggg attatctctt
      301 caaccatagg ttgtttagca agtaagatta gctcactatt atcttcataa aagctattta
      361 tttcatcaac atttaataaa ccaatttcgc cttcttcagc tttcttaatg agagcctgct
      421 catataaacc catacattca gtcatttctt cctgactcaa cacttcaaag ttctcaatcg
      481 caatatctaa atctaaaccc tcatttatcg tatcaataat ttctggaaaa acctttccta
      541 ccaaactagg gaagtctaaa aatccattaa acgcaccagt cccgagaata gtgataaatt
      601 cgggaaaaaa gttaaaaaac cccttttcaa a
//
LOCUS       DANLXD010000239          627 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.240, whole genome shotgun sequence.
ACCESSION   DANLXD010000239 DANLXD010000000
VERSION     DANLXD010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 627)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.240"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..>627)
                     /locus_tag="PXD18_002633"
     CDS             complement(<1..>627)
                     /locus_tag="PXD18_002633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDL6302995.1"
                     /translation="SGEYIARMDADDISLPTRLSEQILYLEENHLDLCGCNALLFSEH
                     GNLGLTNKLNSHEALEKLMVAGDIGIIHPTFLARRKVFVESGGYNPLALHAEDMEFIA
                     HILSMGFRLGNNPKVLFKYRFSTNSVTRRNAFHLYTTISNINKAYKSFKNGGDYIFVN
                     SIKFNKIKEERYSMNKILMTEAREKLVRKNYFGFLYKIILSFIYSPKL"
BASE COUNT          224 a          110 c           72 g          221 t
ORIGIN      
        1 aaaagttttg gagagtaaat aaaagacaat ataatcttat ataagaaacc aaagtaattt
       61 ttcctaacaa gcttttctct agcctcagtc attaaaattt tattcataga atatcgttct
      121 tcttttattt tattaaattt tattgaattt acaaatatat aatcgcctcc atttttaaaa
      181 ctcttatatg ctttatttat attacttatt gtggtatata aatgaaaagc atttcttcta
      241 gtaacgctat ttgtagaaaa cctatatttg aataatacct taggattatt ccctaatcta
      301 aatcccattg ataaaatatg ggcaataaat tccatatctt ccgcatgtaa agctaaggga
      361 ttataccctc cagattcaac aaatactttt ctccttgcta aaaaagtagg gtgaattatt
      421 ccaatatcac cagccaccat aagcttttct aaagcctcat gactattcaa cttatttgta
      481 agaccaaggt tgccatgttc agaaaaaagc aaagcattac aaccgcataa gtctaaatgg
      541 ttttcttcta aatataaaat ttgctctgac aatctagtag gtaaagatat atcatcagca
      601 tccattctcg ctatatattc accagag
//
LOCUS       DANLXD010000240          627 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.241, whole genome shotgun sequence.
ACCESSION   DANLXD010000240 DANLXD010000000
VERSION     DANLXD010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 627)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.241"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
BASE COUNT          186 a          100 c          115 g          226 t
ORIGIN      
        1 ccaaagccct taagctgcgg atattcaaaa gactttttaa agctgacatt ttactctcct
       61 aaattaatgt tttatataag tagcttttat gctcctttta tcatatctca aaaggcattt
      121 taggtaaata agcataaata aaaaaataga tactttatat ctaaagatat tcgtgctatc
      181 ttaaacactg tcctacaaat tgtagaggtg cgaattcaat aagtatttct tctgagtgga
      241 aaacgatgaa ggggaaggaa aggtgaattt gccgaaatca attaagcgtc atcttaattg
      301 gttggggtcg ttgtcgaaag aaacgacact gtcgtagtaa atgctacgga gtgctactgt
      361 tagggtgggt ttcagatatt tcacatttgc cttcctttca tatttatttt tataaatatc
      421 ccagtagatc tcttgtttgg ctattcttat ttatacaaat tatacacagt cattttagag
      481 gttttatgaa tctagttgat tattctacgt cactttggtc ggtattgccg gcactgattg
      541 cgctaatatt ggcaattgtg acacgcaagg tgattatttc acttagcatc ggtattctct
      601 ttggtgcatt tatgcttact aatagca
//
LOCUS       DANLXD010000241          625 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.242, whole genome shotgun sequence.
ACCESSION   DANLXD010000241 DANLXD010000000
VERSION     DANLXD010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 625)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.242"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..>625)
                     /locus_tag="PXD18_002634"
     CDS             complement(<1..>625)
                     /locus_tag="PXD18_002634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302996.1"
                     /translation="DREKISHCTLLNACSKALGFSGGFAGFQEDYLSNLTQFMEKHGL
                     LYLVDLTKQKYPVNDMCMTRSLALKKQDISERIFFSGKEIPKRIFTGFNFRYDMHLAN
                     GFRIGNSLKTPYSDIGICEDINEALKNPSIKIDCRDGTIRSMADVVIGRYLDKVLFYY
                     FNLIGDQLVQPRLDKYEIQCYYPQGYQGDINNDLALHKKFLDFFVSRI"
BASE COUNT          207 a          113 c           82 g          223 t
ORIGIN      
        1 caattcttga tacaaaaaaa tctaaaaatt tcttatgtag agctaagtca ttgttaatat
       61 ccccttgata accttgaggg taataacatt gtatttcata tttatccaat ctaggctgga
      121 ctaactgatc acctatcaag ttaaaataat aaaacaatac tttatcaaga tatctaccta
      181 tgactacatc tgccatactt ctgattgtgc catcacggca atcaattttt attgatggat
      241 tttttaatgc ttcatttatg tcttcacata tacctatgtc agaatatggg gtttttaagg
      301 aatttccgat acgaaaacca ttagctaaat gcatatcata tcggaaatta aatccagtaa
      361 atattctctt agggatttcc tttccgctaa agaaaattct ttcagatata tcttgctttt
      421 tcagagctaa gctccttgtc atgcacatat catttactgg atatttttgt tttgttaaat
      481 ctacaagata taagagccca tgtttttcca tgaattgcgt caaattagat aaataatctt
      541 cttgaaaccc tgcaaagcct ccagaaaatc ctaaagcttt tgagcaagca tttaacaaag
      601 tacagtgaga aattttttct ctatc
//
LOCUS       DANLXD010000242          623 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.243, whole genome shotgun sequence.
ACCESSION   DANLXD010000242 DANLXD010000000
VERSION     DANLXD010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 623)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.243"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            51..>623
                     /locus_tag="PXD18_002635"
     CDS             51..>623
                     /locus_tag="PXD18_002635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302997.1"
                     /translation="MREPLLDEDELKKWLQTIFTDNLVIIVGSGLSCAEGLPGMGALA
                     DRLKERMPECLDDIDKVTWNTISDCLDSEGLEGALLKHQANETIEAAIIKITAEYVLS
                     EEQKAINKCIAENQKLKFSYLLPHISASNPKIARVITTNYDRLIEFAAEYENWGIDSM
                     MVGRYWGKHNPDLSRKLQIRDIRVKGKCPKL"
BASE COUNT          215 a           81 c          144 g          183 t
ORIGIN      
        1 gtagtaaaca gctagtttgt aagaatagat atttggaagg gaaacgtaaa atgagagaac
       61 cattattaga tgaagatgaa ttaaaaaaat ggttgcaaac tatttttact gacaatttgg
      121 tcattattgt cggttcgggt ttgtcctgtg ccgaaggttt gccgggaatg ggagcattag
      181 ctgatagatt aaaagaacga atgcctgaat gtcttgatga tatagataag gtaacatgga
      241 ataccatttc tgattgtctg gattctgaag gcttggaagg tgcattgttg aagcatcaag
      301 caaatgagac gatagaagcc gctattatta aaataacagc cgagtatgta ctctccgaag
      361 agcaaaaagc gataaacaaa tgtattgctg agaatcagaa gctcaaattt tcttatttgc
      421 ttccccatat ttcagcttca aatcctaaaa ttgcccgtgt aattactact aattatgata
      481 gattgattga gtttgcggca gagtatgaaa attggggaat agattcaatg atggtcggtc
      541 gttattgggg aaaacataat cctgatttga gtaggaaatt gcagataaga gacattagag
      601 taaaaggtaa atgtccaaaa ttg
//
LOCUS       DANLXD010000243          616 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.244, whole genome shotgun sequence.
ACCESSION   DANLXD010000243 DANLXD010000000
VERSION     DANLXD010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 616)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.244"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(378..453)
                     /locus_tag="PXD18_002636"
     tRNA            complement(378..453)
                     /locus_tag="PXD18_002636"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(418..420),aa:Ala,seq:tgc)
     gene            complement(510..586)
                     /locus_tag="PXD18_002637"
     tRNA            complement(510..586)
                     /locus_tag="PXD18_002637"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(550..552),aa:Ile,seq:gat)
BASE COUNT          160 a          148 c          106 g          202 t
ORIGIN      
        1 gcacgtcctt cttcgcctct gattgccaag gcatccacct tgtgcgctta gtcacttaac
       61 tatacaacct caaatgtttt ctaaaacttc tcaaaaataa aagtaaaaaa acaatgaagt
      121 cagttttaca actaaacact tgactgcttt tgttcagtca agattttttc tactcagact
      181 ttcaatttat tcgttatcac ttatgtataa ttacttatgc gtaacgaact tgaaatatct
      241 ctcagttttt cagcttgttt ccatattgtt aaagaacaaa gataatggct ttcgcctatc
      301 atcataccta aaattgcaaa taatccggta tttttaaccg cttgtaatct taggtatgat
      361 gataaagtca cgatgattgg tggagataag cgggatcgaa ccgctgacct cctgcgtgca
      421 aggcaggcgc tctcccagct gagctatatc cccatttcat cttccgtttt cttcactcat
      481 agtcgcttcg ctttcgcttg ccttctgagt ggtgggtctg agtggacttg aaccaccgac
      541 ctcaccctta tcaggggtgc gctctaacca cctgagctac agacccaacg gatgaccttc
      601 ggttttttgt cttctt
//
LOCUS       DANLXD010000244          607 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.245, whole genome shotgun sequence.
ACCESSION   DANLXD010000244 DANLXD010000000
VERSION     DANLXD010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 607)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.245"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..>607)
                     /locus_tag="PXD18_002638"
     CDS             complement(<1..>607)
                     /locus_tag="PXD18_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6302998.1"
                     /translation="EKYENLLKNKYYILDDSILAFRKLNKSNIDFARIAFDSIRSAQN
                     CTVLGLDISKFFDHIDHKILKDMWCKVLGVPSLPEDHHSVFKAITKFVKVDRDTVFEF
                     FNISLHNPRKNGKNRICSPREFREYRKLKKPDLFNDNPAFFINKGQKGIPQGSPISAL
                     LSNIYMLEFDVLVKEKIMECKGSYFRYCDDILCIIPNEYEEF"
BASE COUNT          210 a          109 c           75 g          213 t
ORIGIN      
        1 taaattcttc gtattcatta ggaatgatac atagaatgtc atcacaataa cgaaaataac
       61 tccctttgca ctccataatc ttttctttaa ctaacacatc aaactctaac atatagatat
      121 tggataacaa tgcacttatt ggagaacctt gaggaatccc tttctggcct ttattaataa
      181 aaaaagctgg attatcatta aataagtcag gtttctttaa tttcctatat tctcgaaatt
      241 cccgagggct acaaattcta ttcttcccat ttttcctagg attatgaagg gagatattaa
      301 agaattcaaa tacagtatct ctatctactt ttacgaattt agtaatagcc ttaaatacag
      361 aatgatggtc ttcaggtaaa ctaggtacac ccaaaacttt acaccacata tctttcagaa
      421 ttttatggtc tatatggtca aagaacttag atatatctag ccctaaaacc gtgcaatttt
      481 gagcgcttcg aatactatca aaagcgattc tggcaaaatc aatattgctt ttatttagtt
      541 ttctaaatgc taatatagaa tcatctaaaa tatagtactt atttttcaaa agattttcat
      601 acttttc
//
LOCUS       DANLXD010000245          603 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.246, whole genome shotgun sequence.
ACCESSION   DANLXD010000245 DANLXD010000000
VERSION     DANLXD010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.246"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..>603
                     /locus_tag="PXD18_002639"
     CDS             <1..>603
                     /locus_tag="PXD18_002639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HDL6302999.1"
                     /translation="LAYEDYSLINQKFLKFQWKSNYAYANWLETTANKIKRSKDDSIE
                     WHRKNEKEIPFWVITETWDFGALSKFYSLLNGQHQRKIAKKFNVDENTLKNWLNEINI
                     VRNLSAHHSRIWNRKFSDIAIPKLDDPRWSKFKKMQQYFSNLSLDDKAKERIFGRVAI
                     LWFLVSQTSTNYHWLDKFEDLLNDFPNLPNTKVELMGFNR"
BASE COUNT          217 a           80 c          113 g          193 t
ORIGIN      
        1 ctttggctta tgaagattat tctctgatta atcaaaagtt cttaaaattt caatggaaat
       61 ctaattatgc ttatgcaaat tggctagaaa ctacagctaa taaaattaag cgtagtaaag
      121 atgattctat tgaatggcat agaaaaaatg agaaggaaat ccctttttgg gtaattactg
      181 aaacctggga ttttggtgca ttatctaagt tttactcatt gttaaatggg caacaccaaa
      241 ggaaaattgc taagaaattt aatgtagatg agaatacgtt aaagaattgg ttgaatgaaa
      301 taaacattgt aagaaacctt tctgctcacc attctcgtat ttggaacaga aaatttagcg
      361 atattgctat tcctaagcta gatgatcctc gttggtcgaa atttaaaaaa atgcagcagt
      421 atttttcaaa cttatcgctg gatgacaaag caaaggagag aattttcgga agggtagcta
      481 ttctgtggtt tttagttagt caaaccagca ctaattacca ttggttagat aagtttgaag
      541 atttattaaa tgacttccct aatttaccga atacaaaagt agaactgatg ggatttaaca
      601 gag
//
LOCUS       DANLXD010000246          592 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.247, whole genome shotgun sequence.
ACCESSION   DANLXD010000246 DANLXD010000000
VERSION     DANLXD010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 592)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.247"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(19..303)
                     /locus_tag="PXD18_002640"
     CDS             complement(19..303)
                     /locus_tag="PXD18_002640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010128390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6303000.1"
                     /translation="MANITLSHITPKHFFETVRLLKMQEHRIYIGVDSIEVRFKQKRF
                     ESKKETDKRLEQLEHFMLFLQEIINSDIPIDLDEFIYTYHRSVRRGFYRR"
     gene            complement(321..482)
                     /locus_tag="PXD18_002641"
     CDS             complement(321..482)
                     /locus_tag="PXD18_002641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HDL6303001.1"
                     /translation="MEKIENSSNLVLKLSLENQMLILESLEHPKEPNLVMLEALKKYS
                     LYVAKTSNK"
BASE COUNT          181 a          106 c           95 g          210 t
ORIGIN      
        1 cactcctctt tcacatcact aacgtcgata aaaacctctc cttactgacc tgtgataggt
       61 gtatataaac tcatctaaat ctataggaat atctgaatta atgatttctt gtagaaagag
      121 cataaaatgc tctaactgtt ctagtctctt atctgtttcc ttttttgact caaaacgctt
      181 ttgcttaaaa cgaacttcta tcgaatctac accgatgtaa attcgatgtt cctgcatttt
      241 gagtagtcgg acagtttcaa aaaaatgttt aggggtgatg tgagaaaggg ttatatttgc
      301 catagtttag cttgaaaacg ctatttatta cttgttttag caacatacaa agaatacttt
      361 tttaaagcct ctagcattac taaattaggc tctttaggat gttctaagct ctcaagaatt
      421 agcatttgat tttcaagaga aagctttaga acaagatttg aactattctc tattttttcc
      481 attttaatta tctcattaga tgactttcgc ataacaacag gttatgtgta aattctcgtg
      541 cagtgggaca agcccgattg tactgcactc gaattgtaac ataacctgta gg
//
LOCUS       DANLXD010000247          592 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.248, whole genome shotgun sequence.
ACCESSION   DANLXD010000247 DANLXD010000000
VERSION     DANLXD010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 592)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.248"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..>592
                     /locus_tag="PXD18_002642"
     CDS             <1..>592
                     /locus_tag="PXD18_002642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDL6303002.1"
                     /translation="WVGANLTEEELSLINKVKNHRSVYKFSDIATVEVGIVTGANDFF
                     LVNDHIVSKYKLDRFVYPMFGKSQHCKGIIYDNEQHFENKEKNLPTNFIYLEDNESNL
                     PLLVQTYIKEGEDAEYHKRYKCKIRKPWYKVPSVYSTNIGMLKRSHEAPKLILNKLGA
                     YTTDTAYRIKSNKFQDEILVCCFLNPLTMILSELNGR"
BASE COUNT          222 a           71 c          111 g          188 t
ORIGIN      
        1 tgggttgggg ctaatttaac tgaagaagaa ttgagtctta ttaataaggt aaaaaatcat
       61 agatctgttt ataaattctc tgatatagca acggtggaag ttggtatagt tacgggagcc
      121 aatgattttt tcttagttaa tgatcatatt gttagcaagt ataagttaga tcggtttgtt
      181 tatcctatgt tcggaaaaag tcagcattgc aaaggaatca tatacgataa tgaacaacat
      241 tttgaaaata aagaaaaaaa tttgccaact aactttattt atttagaaga taatgagagt
      301 aatcttcctt tacttgtaca aacttatata aaagaaggtg aggatgcgga gtatcacaaa
      361 agatataaat gcaaaataag aaaaccatgg tataaagttc catcggttta ttcaactaac
      421 ataggaatgc tgaaaagaag tcatgaagca ccaaaactaa tattgaataa attgggggct
      481 tatactaccg atactgcgta tcgtataaag tcaaataaat ttcaagatga gattcttgtg
      541 tgctgtttcc taaatccatt aactatgatt ttatctgagt taaatggaag gt
//
LOCUS       DANLXD010000248          581 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.249, whole genome shotgun sequence.
ACCESSION   DANLXD010000248 DANLXD010000000
VERSION     DANLXD010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.249"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..298
                     /locus_tag="PXD18_002643"
     CDS             <1..298
                     /locus_tag="PXD18_002643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6303003.1"
                     /translation="ACLIYLRKFGYSLGRPYADTVYQSKFPNMKELRIQNKGKPIRAF
                     YAFDPLRQAIVLCAGEKGKDKRFYEKMIALADAEFTSYLNNLEKENENVRSNAQ"
     gene            270..569
                     /locus_tag="PXD18_002644"
     CDS             270..569
                     /locus_tag="PXD18_002644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HDL6303004.1"
                     /translation="MKTLDQMLNELSPERRQKVEDMAQEMIREIQLSKLREELNLSQQ
                     QLATALGISQPAIAKLEQKDNDPRLSTLKRYIEAMGGKLKLAVELPTGDERVIRI"
BASE COUNT          201 a          107 c          111 g          162 t
ORIGIN      
        1 ggcttgttta atctatctgc ggaaattcgg ttatagtcta ggcagacctt atgctgatac
       61 agtttatcag tctaaattcc ctaatatgaa agagttacgc attcaaaaca aaggtaagcc
      121 aattcgagca ttttatgctt ttgacccttt acgccaagcg atagtacttt gtgctggcga
      181 gaaaggtaaa gacaaaagat tctatgaaaa aatgatcgct cttgctgatg cggaatttac
      241 ctcctattta aataatttag agaaagaaaa tgaaaacgtt agatcaaatg ctcaatgaac
      301 tctctcctga acgccgccaa aaagtggaag atatggctca agaaatgatt agagagatac
      361 aactttcaaa actaagagaa gagctaaatc tctctcaaca acaattagct acagctctcg
      421 gtatttcaca gcctgctatt gctaaacttg aacagaaaga taacgatcca agattatcca
      481 cgctcaaacg ctatattgaa gcaatgggcg gtaagttaaa acttgccgtt gaattgccta
      541 caggcgatga gcgtgtaatt aggatttaat tactttgtta a
//
LOCUS       DANLXD010000249          580 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.250, whole genome shotgun sequence.
ACCESSION   DANLXD010000249 DANLXD010000000
VERSION     DANLXD010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 580)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.250"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..>580)
                     /locus_tag="PXD18_002645"
     CDS             complement(<1..>580)
                     /locus_tag="PXD18_002645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6303005.1"
                     /translation="LMLCSLWFLSACFNESYDFRGKEFEEPVQAILVESDKIYFIGST
                     IDAIFDKTLIDNTKASDVIYFLNKLLQSPYGRKISNHLITLAIYDENIQIQYSPQFIA
                     KNLTMSDIQALQKLGFQFSHSKEYLWKSYAGLGGKITQFKNRKEILEKYKFKQPIIAK
                     AKSYQKSIEFSFDDTISVIAAPITIPASIILFV"
BASE COUNT          186 a           92 c           94 g          208 t
ORIGIN      
        1 tacaaataaa ataatagatg cgggaatcgt aattggtgct gcaatgaccg aaatggtgtc
       61 atcaaagcta aattctatgc ttttctgata acttttcgct ttagcgatta taggttgctt
      121 aaatttatac ttttctagta tttccttgcg atttttaaac tgtgtgattt taccaccaag
      181 acctgcatag cttttccata gatattcttt tgaatggcta aattgaaaac ctaacttttg
      241 tagagcttga atatcgctca tggtgagatt ttttgcaata aattgcggac tgtactgaat
      301 ttgaatattt tcatcataaa tggctaaagt aattaggtga ttactgatct tccttccata
      361 cggactttga agaagtttat tcaaaaaata aataacatct gaagcttttg tattatctat
      421 cagcgtttta tcaaatatcg catcaattgt ggaaccaatg aaataaattt tatctgattc
      481 aaccaaaatt gcttgtacag gttcttcaaa ttcttttcct ctaaaatcat aactttcgtt
      541 aaagcatgcg gagagaaacc atagtgagca gagcattaag
//
LOCUS       DANLXD010000250          573 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.251, whole genome shotgun sequence.
ACCESSION   DANLXD010000250 DANLXD010000000
VERSION     DANLXD010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 573)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 573)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.251"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..528)
                     /locus_tag="PXD18_002646"
     CDS             complement(<1..528)
                     /locus_tag="PXD18_002646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6303006.1"
                     /translation="MKNIETKWLEDFLTLEECRHFSQAAEKRNLSQSAFSRRILALEE
                     VVGVKLFDRTSIPLQLTEQGKLFHSQTRNLLQQLQNNLDELLGHNCNLPNIKFAAAHS
                     LSLSIMPKLIKKLSQTNENFIYSVEAIDVDQTVNTLIEGKSDFIFSFYDEKLMQPPFM
                     SLEIMQSKLYPISPID"
BASE COUNT          186 a           82 c           94 g          211 t
ORIGIN      
        1 gtctattggg gaaatagggt aaagtttaga ttgcattatt tctaaagaca taaagggtgg
       61 ttgcattaat ttttcatcat aaaatgaaaa aataaaatca ctttttcctt caattagagt
      121 atttactgtt tggtcaacat cgattgcttc aacggaataa ataaaatttt catttgtttg
      181 tgataatttc ttaattaatt tgggcataat agaaagagag agggaatgag ccgccgcaaa
      241 tttaatatta ggtaagttac aattatgtcc taataattca tctagattat tctgtaattg
      301 ttgtaataag tttcgcgttt gtgaatgaaa tagcttacct tgttctgtga gttgtaatgg
      361 aatagaggta cgatcaaata acttcactcc cacaacttct tctaaagcta aaatacgtct
      421 gctaaatgca gattgtgaca aatttctttt ttctgctgcc tgagaaaaat ggcgacattc
      481 ttctagcgtt aagaaatctt ctaaccattt tgtttctatg tttttcatat cctaaccaat
      541 gcaaatttcg cattatgatt tcattaaatg cat
//
LOCUS       DANLXD010000251          561 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.252, whole genome shotgun sequence.
ACCESSION   DANLXD010000251 DANLXD010000000
VERSION     DANLXD010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 561)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.252"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
BASE COUNT          174 a           97 c          110 g          180 t
ORIGIN      
        1 caactacctc taaggatagc cgtcgcttct caggagttat gcgacttatt aagtgctgtt
       61 atatacagcg tcttaaattg aggataattt agtcatattg aatcataaag ttaattgaga
      121 attgaatttt gattttagag aattggaaat gacaacaccg ttgataaatc acttaccaac
      181 ggtgttgtac ttttgaagaa taaatgaaat ttaagttaga ccaatataag ttactatatt
      241 gaaaatagca gcaccttcgt gacaatgttg atattttcgt tcgtaattta cccgattacc
      301 ttgtggtctt taatcggcat atctgtggca tcatcgagga cacaaacggc accctttatt
      361 cacctgtggg ctcaggctaa gaaaagtgag caatgattgc aatgtcataa tatccccaag
      421 tcgggtaata ttatgacatt gcaatcacgc atgtgacaaa atacaacgga taaagtggct
      481 ggcattatcc atttattgtt taggtggcat tcctgtaatt ttacagagtt ccctttcaga
      541 atgctgggag acatttcggc t
//
LOCUS       DANLXD010000252          556 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.253, whole genome shotgun sequence.
ACCESSION   DANLXD010000252 DANLXD010000000
VERSION     DANLXD010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 556)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 556)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.253"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..>556
                     /locus_tag="PXD18_002647"
     CDS             <1..>556
                     /locus_tag="PXD18_002647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6303007.1"
                     /translation="NLETTIDIHLITKKINTLIEYFQDFSKNNLNNEKSNNNDYYHFR
                     NLINGLEDIIQILNSSELSLFNGKVLVLTGQAGSGKSHLLGDFVQKRQNSGKYSLLLL
                     GQDFTEKSNAWNQILSKQLNLNITPEVFLSALDSIGEMQKERVILAIDALNEGEGKSL
                     WNNQLNGLIELVSQYPNIGLVLSVR"
BASE COUNT          212 a           70 c           90 g          184 t
ORIGIN      
        1 ataatttaga aacaacaatt gatattcatc taataactaa aaaaattaat acattaatag
       61 aatactttca agatttttca aaaaacaatc taaacaacga aaaatccaat aataatgact
      121 attatcattt tagaaattta attaatggtt tggaagacat tattcagatt ttaaattcat
      181 ctgaattatc attatttaat ggtaaagtgc ttgttttaac tggtcaagct ggtagtggaa
      241 aatctcattt attgggtgat tttgtccaaa aaagacaaaa ttctggaaag tattctttgt
      301 tgttattggg gcaggatttt acagaaaaat ccaatgcttg gaatcaaatc ttatccaaac
      361 aattaaatct taatatcaca cccgaagtat ttttatccgc attagatagt atcggagaaa
      421 tgcaaaaaga acgggttatt ttagccatag acgccttaaa tgagggtgaa gggaaatcat
      481 tatggaataa ccaacttaat ggattaattg agttggtaag tcaatatcca aatattggac
      541 tggttctgag tgtgcg
//
LOCUS       DANLXD010000253          543 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.254, whole genome shotgun sequence.
ACCESSION   DANLXD010000253 DANLXD010000000
VERSION     DANLXD010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 543)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.254"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            13..408
                     /locus_tag="PXD18_002648"
     CDS             13..408
                     /locus_tag="PXD18_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL6303008.1"
                     /translation="MKKLMIFATTAMIVSNLAHAAGEQSDAREAHESTVKTSTVKYSC
                     QNGKKLSVKYGFNKQGIPTYAEAKLSGKKRFMPINLYTTDATGTNFGDENNFSLYGDP
                     MEFTNHRKASVNIQSPASEILYKGCTPQK"
BASE COUNT          208 a          102 c           98 g          135 t
ORIGIN      
        1 aaaggaaaat atatgaaaaa attgatgata ttcgcaacaa ctgccatgat tgtaagcaat
       61 ttagcccatg cagcaggtga acaaagtgat gcaagagaag cccacgaaag caccgtaaaa
      121 acctcaactg ttaagtatag ctgccaaaac ggcaaaaaat taagcgtgaa atacggcttc
      181 aataaacaag gcattccaac ctatgctgag gcaaaattaa gcggtaaaaa acgttttatg
      241 ccgatcaacc tatacacgac agatgcaacc ggcactaact ttggtgacga aaacaatttc
      301 agcctttacg gtgatccaat ggaatttacc aaccaccgta aagcatcagt aaatatccaa
      361 agccccgcaa gtgaaatttt atataaaggt tgcacacctc aaaaatagat aaaaagtaaa
      421 atgagtccgc tctgataagt ggctttttaa tagctgttta ttgcagatag gaaagcattt
      481 tgtttttatc tactatccag aaacaagcgg ttaaatttgt ttaatttttt acaaaaaatg
      541 ggc
//
LOCUS       DANLXD010000254          537 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.255, whole genome shotgun sequence.
ACCESSION   DANLXD010000254 DANLXD010000000
VERSION     DANLXD010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.255"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..511)
                     /locus_tag="PXD18_002649"
     CDS             complement(<1..511)
                     /locus_tag="PXD18_002649"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6303009.1"
                     /translation="MANTLHSDTYLLIVEPGSHYKTLLDKQIDTKEALDQFANANIIS
                     IGNNIGRIKALHGNFPSEVQCDEKLRKLSTLKSAISYFVSKSFKDVEIYHWLYKPEQI
                     KHINSSQKYVYEVYDEYTMDFATGEIKEDVAQLEKEVLAKSSYTFFTSEPLFERKREY
                     LNSKQSKVIS"
BASE COUNT          155 a           88 c           86 g          208 t
ORIGIN      
        1 tagatattac tttggactgt ttgctgttta aatattctct ttttctttca aagagaggct
       61 cgctagtaaa aaaagtatag ctggattttg ctaatacttc tttttctagt tgtgctacat
      121 cttcttttat ttctcccgtt gcgaagtcca ttgtatattc atcgtaaact tcataaacat
      181 atttttggct tgaattaata tgcttaattt gttcaggctt ataaagccaa tgatagattt
      241 caacatcttt aaatgatttt gaaacaaaat aagaaatagc acttttaagc gtggataatt
      301 ttctcaattt ttcgtcacat tgcacctcag atgggaaatt gccgtgcaga gcctttattc
      361 taccaatatt attaccgatt gatatgatgt tggcattagc aaattggtct aaggcttctt
      421 tggtgtcaat ttgcttgtct aacaatgttt tataatgaga acccggttcc acaattagca
      481 agtaagtatc actatgtaat gtattagcca aagctgttag catctctttt ctatgaa
//
LOCUS       DANLXD010000255          522 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.256, whole genome shotgun sequence.
ACCESSION   DANLXD010000255 DANLXD010000000
VERSION     DANLXD010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 522)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.256"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..>522
                     /locus_tag="PXD18_002650"
     CDS             <1..>522
                     /locus_tag="PXD18_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDL6303010.1"
                     /translation="FLKPSWFILAIIMTLRCTGIRRGQLVKLKIGDVNLSNRTIYISP
                     EINKNHDYHIVPISDSLYPHIERLIQELKIHKQTDDCQLFNLNLFSRYTRRKGQPMSQ
                     NQLTHIFRHISDLVGFTSSPHRFRHTVATQLMKKPENVYVVKKLLGHKDISVTLGYIE
                     YDVEMLRDTVNLL"
BASE COUNT          177 a           88 c           93 g          164 t
ORIGIN      
        1 ttttttaaaa cctagctggt ttattcttgc tatcattatg acattgagat gcacaggaat
       61 taggagaggg caattggtta aactgaaaat cggtgatgtt aatttatcaa ataggacgat
      121 ctatatttca ccagaaatta ataaaaacca tgattatcat atagtaccga tatccgattc
      181 actttatccc catatagaaa ggctgattca ggagttaaag atccataaac aaacggatga
      241 ttgccagtta tttaacctca atttattttc tcgttatact cgtaggaaag gtcagccgat
      301 gagccaaaac cagcttactc atatatttag gcatatttcc gatttggttg gcttcacgtc
      361 atcaccacat agatttcggc atacagtagc tactcaattg atgaagaaac ctgaaaatgt
      421 ttatgtagtt aagaaattat taggtcataa agatatcagc gttacattag gatatattga
      481 atacgatgtg gaaatgctac gagacaccgt gaacttactc ta
//
LOCUS       DANLXD010000256          503 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.257, whole genome shotgun sequence.
ACCESSION   DANLXD010000256 DANLXD010000000
VERSION     DANLXD010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.257"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            91..>503
                     /locus_tag="PXD18_002651"
     CDS             91..>503
                     /locus_tag="PXD18_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI domain-containing protein"
                     /protein_id="HDL6303011.1"
                     /translation="MHSILKKILGKSKSSSQSSVKSDNVFAIEQDSEGWLYPKNASQL
                     LNTELRQKYLGLLWQQVSMNRQMFEALYQQPIERYAEMVQLLPASESHHHSHIGGMLD
                     HGLEVIAFSAKVRQNYILPPNVAPEEQSKQRDAWTA"
BASE COUNT          153 a          116 c           98 g          136 t
ORIGIN      
        1 acctttccaa ggggaaaggt cttacccaaa agggcaaagg gctaaacggc tttctttcaa
       61 cgcaaacatc atctttttcg gtctatttca atgcactcaa ttctcaaaaa aattcttggc
      121 aaaagtaaat cctcgtctca aagttcggtt aaatctgaca atgttttcgc tattgagcag
      181 gatagtgagg gctggttata tccgaaaaat gcctcccaac tacttaatac ggaattacgc
      241 caaaaatatc tgggtctact ttggcaacag gtatcaatga accgtcaaat gtttgaggca
      301 ctttatcaac agccaataga gcgttatgcc gaaatggtgc aactgttacc cgcttccgag
      361 tcacatcatc attcacatat cggcggaatg ctcgatcacg gtttggaagt tattgctttt
      421 tcagccaaag tccgtcaaaa ctatatattg ccaccgaatg tcgcacctga agaacaatct
      481 aagcaacgag acgcttggac tgc
//
LOCUS       DANLXD010000257          494 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.258, whole genome shotgun sequence.
ACCESSION   DANLXD010000257 DANLXD010000000
VERSION     DANLXD010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 494)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 494)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.258"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            26..451
                     /locus_tag="PXD18_002652"
     CDS             26..451
                     /locus_tag="PXD18_002652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDL6303012.1"
                     /translation="MYKHILVAVDLSEESLVLVRKGAALAEKCGAKLSLIHVDVNFSD
                     LYTGLIDINMSSVQYSVVEETNTALAELASKVNYPVSECLNGTGDFSQVLEEAVEKHN
                     VDLLITGHHQDFWSKFMSSTRRVMNNITVDMLVVPLADE"
BASE COUNT          156 a           81 c          105 g          152 t
ORIGIN      
        1 aactctcaca agcaaggagc atattatgta taaacatatc ttagttgcag tggatctttc
       61 tgaagaaagt cttgttttag tgcgtaaggg ggctgcgtta gcagaaaaat gcggagctaa
      121 actttccctc attcacgttg atgttaattt ttcggatctc tatacaggat taattgatat
      181 taatatgtct tcggtacaat acagtgttgt tgaagaaaca aatacggcac tggctgaact
      241 tgcctcaaaa gtaaattatc ctgtatctga atgtttaaac ggaacgggag attttagtca
      301 agttttggaa gaggccgtag aaaaacacaa tgtcgattta ctcatcactg gccatcatca
      361 ggacttctgg agtaaattta tgtcttcaac tcgtcgagtc atgaataata tcactgttga
      421 tatgctggtt gtgccattag cagatgaata gcaagaaagt gaatgaaaaa taaccgcttg
      481 agacagttta tctg
//
LOCUS       DANLXD010000258          483 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.259, whole genome shotgun sequence.
ACCESSION   DANLXD010000258 DANLXD010000000
VERSION     DANLXD010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.259"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            62..>483
                     /locus_tag="PXD18_002653"
     CDS             62..>483
                     /locus_tag="PXD18_002653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6303013.1"
                     /translation="MELGKTTETDVKEMYNLEPEGVNKYSKGNQYFIDPTQLDLEDLK
                     STLIIFDEKGVLVFVGSEFNSISSIEDSKNRYKKFDYLYKILASKYKLVKKERPFVGD
                     QYAKFKDGNSEIELSEPHMGGFKINLTYAKKEFLDAFQ"
BASE COUNT          189 a           67 c           79 g          148 t
ORIGIN      
        1 taaagctaca ttatttgcaa ctattagtac ttctgtatta gctgaaccaa ccgtttttaa
       61 aatggaacta ggtaaaacaa cagaaacaga tgtaaaagaa atgtataacc ttgaaccgga
      121 gggtgttaat aaatacagca agggtaatca gtattttatt gatccaacgc aattagattt
      181 agaagatctt aaatcaacgc ttattatctt tgatgaaaaa ggggtattag tttttgttgg
      241 ttccgagttt aattctatat cttctatcga ggattcaaaa aaccggtata aaaaattcga
      301 ttatttgtac aaaatactag caagcaaata taaacttgta aaaaaagaac gtccatttgt
      361 aggcgatcaa tatgctaaat ttaaagacgg taattcagaa atcgaattat cagaaccaca
      421 tatgggtggt tttaaaatta acttgactta tgcaaaaaaa gaattcttag acgcattcca
      481 aaa
//
LOCUS       DANLXD010000259          401 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.260, whole genome shotgun sequence.
ACCESSION   DANLXD010000259 DANLXD010000000
VERSION     DANLXD010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 401)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.260"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(166..>401)
                     /locus_tag="PXD18_002654"
     CDS             complement(166..>401)
                     /locus_tag="PXD18_002654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6303014.1"
                     /translation="LRHSHVAYLIEQGFSPVVIAERLGHESISITLNYAHLYLGRDKT
                     EKKESVIGAIKKHKRKIDKTIEQSHSMSNDMEL"
BASE COUNT          122 a           80 c           45 g          154 t
ORIGIN      
        1 agaaacatta agacttgcca taatcccccc ttgccacatt tcaatctatt cagtagacat
       61 tatagcatat tttacctgtt ttttctatat ttttggctaa aaacatgatg ctaattgctt
      121 caaaaaaatg gagagtatca aatttataat actctccatg tatctctata gctccatatc
      181 gttactcata ctatgactct gctcaattgt tttatctatt ttccttttat gtttcttaat
      241 tgctccaata actgattcct ttttctctgt tttatcccta ccaagatata aatgtgcata
      301 gtttaaggtt attgagatac tttcatgacc taatctttct gcaattacca caggagaaaa
      361 tccttgctct atcaaataag caacatgaga atgtcttaaa t
//
LOCUS       DANLXD010000260          392 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.261, whole genome shotgun sequence.
ACCESSION   DANLXD010000260 DANLXD010000000
VERSION     DANLXD010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 392)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 392)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.261"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..>392
                     /locus_tag="PXD18_002655"
     CDS             <1..>392
                     /locus_tag="PXD18_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6303015.1"
                     /translation="HNANVRLLNFDEYKFISPFEQTDRNEWKHEDIEFIYDEKISTEP
                     PPYMEEEKFQKIIMRFSKDIKIMMHNHINFIESDRFAEWILEKACVRSKTLTSFYGDK
                     SVIRAVPPLDWSGKYKYTKIGFRLCYDL"
BASE COUNT          156 a           52 c           69 g          115 t
ORIGIN      
        1 aacataatgc aaatgtaagg ctattaaatt ttgatgaata taagtttatt tctccgtttg
       61 aacaaacaga tagaaatgaa tggaagcatg aagatataga atttatatat gatgagaaaa
      121 tatctacaga accacctcct tatatggagg aagaaaaatt tcaaaaaata ataatgaggt
      181 tttcaaaaga tataaaaata atgatgcaca accacataaa cttcatagaa tctgacagat
      241 ttgcggaatg gattcttgaa aaggcttgtg ttcgctctaa aacattaacc agcttttatg
      301 gcgacaagtc tgttataagg gccgttccac cattggattg gtcaggaaaa tataaatata
      361 ccaaaatagg atttagatta tgctacgatt tg
//
LOCUS       DANLXD010000261          391 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.262, whole genome shotgun sequence.
ACCESSION   DANLXD010000261 DANLXD010000000
VERSION     DANLXD010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 391)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 391)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.262"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..>391
                     /locus_tag="PXD18_002656"
     CDS             <1..>391
                     /locus_tag="PXD18_002656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015483985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6303016.1"
                     /translation="NKLSDNPAIISGKQGVIFCDDLSLGVNKHRLRLRFSSPINFTVN
                     QEWQKMPFDRVLNDINGHVDIVSGQFIARTGGTFHLKGKITVTNSSEDVLNLYQLRLL
                     INNEEKERLINQSVSPKNSKSNTNGMTT"
BASE COUNT          145 a           54 c           76 g          116 t
ORIGIN      
        1 taataaatta tcggacaatc ctgcgattat atcaggtaag caaggtgtta ttttctgcga
       61 tgatttgagc ttaggagtaa ataagcacag attaagattg cgattttcat cgccgattaa
      121 ttttactgtt aatcaagaat ggcaaaaaat gccgtttgac agagtgttaa atgatatcaa
      181 tggtcatgtt gatattgtca gtggtcaatt tattgcaagg acaggcggca cttttcattt
      241 aaaaggtaaa ataacggtta caaattcatc ggaagatgtg ctgaatttat atcaactcag
      301 gctgttaata aataacgaag agaaagaaag actgattaat caaagtgttt cacctaaaaa
      361 cagcaaatca aatacaaatg gtatgacaac a
//
LOCUS       DANLXD010000262          378 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.263, whole genome shotgun sequence.
ACCESSION   DANLXD010000262 DANLXD010000000
VERSION     DANLXD010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 378)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 378)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.263"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..266
                     /locus_tag="PXD18_002657"
     CDS             <1..266
                     /locus_tag="PXD18_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6303017.1"
                     /translation="ENLKKAAKFTGIISSIKDYYDLAEGFRNGIKSNDWEPFLKTSAQ
                     IGASALMSMLVASMITGPTTIGSIIISAAFISIGGYIISLASR"
BASE COUNT          140 a           56 c           62 g          120 t
ORIGIN      
        1 atgagaattt aaaaaaagca gcaaaattta ctggtattat tagcagtatt aaggattatt
       61 acgatctagc agaagggttt agaaatggca taaagtctaa tgattgggaa ccttttttaa
      121 agacatctgc tcagataggt gcttcagctt taatgagtat gttagtagcc tcaatgataa
      181 caggcccaac gacaattggg agtattatta ttagtgctgc atttatttct atagggggat
      241 atattatttc actagcttcc cgttagatag tctttgttat actcaataac ctactatact
      301 acctataggc tattgaacta tcatacatca gctctattaa ccaaaaaaac aaaaaaaaat
      361 attgcaaata aaaataaa
//
LOCUS       DANLXD010000263          376 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.264, whole genome shotgun sequence.
ACCESSION   DANLXD010000263 DANLXD010000000
VERSION     DANLXD010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.264"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
BASE COUNT          131 a           55 c           69 g          121 t
ORIGIN      
        1 agttaagaat aaaatcattt agcctaggat aattttctgc tgagattgta taatcttgct
       61 tataaatttc tgcaccattg agtttacaaa gtgaaatttc aattttatga gatgaaacag
      121 taacacaaag tagttgccaa aaaaaattag aaacagctaa tccaacggag gggcgacctc
      181 tggataaagt agtctgaacc gtacgttcta aaatgaagtg gttatctatt agtattttag
      241 tcagatttgt tactgaagct ggggctaacc ccgatagttt agctaaatct gttcttgaaa
      301 tgagttcaaa ttgctcaatt aaatggtata ttttacccaa atgaagggct ttgttgtcag
      361 aaaacattta aaatcc
//
LOCUS       DANLXD010000264          374 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.265, whole genome shotgun sequence.
ACCESSION   DANLXD010000264 DANLXD010000000
VERSION     DANLXD010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.265"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..>374
                     /locus_tag="PXD18_002658"
     CDS             <1..>374
                     /locus_tag="PXD18_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015483985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6303018.1"
                     /translation="QVEDVQTGECVVANNICSHDIWMSGAKNAIINSNLCRRLRVTSG
                     NPTDTGSNNVEFSNNQAKSIAISKYGSFDNPSLFIDNINFINNILEPSEFNQDVYIDG
                     TILKQCQFINNRCISKSKQYSV"
BASE COUNT          125 a           63 c           68 g          118 t
ORIGIN      
        1 acaagtggaa gatgtacaaa ctggcgaatg tgtggtagcg aataatattt gcagccacga
       61 tatttggatg tctggtgcta aaaatgccat tatcaacagc aacctctgcc gtcgcttgcg
      121 tgtcacatca ggtaatccga ctgacacagg cagcaacaat gtagaatttt caaataatca
      181 agcaaaatct attgcaatat cgaaatatgg ttctttcgat aatccttcat tgtttattga
      241 taatatcaat tttattaata acattttgga gcccagtgaa tttaatcaag atgtgtatat
      301 tgacgggaca attttaaaac agtgccaatt tattaataat cgttgtatta gcaagtctaa
      361 gcaatattct gtca
//
LOCUS       DANLXD010000265          324 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.266, whole genome shotgun sequence.
ACCESSION   DANLXD010000265 DANLXD010000000
VERSION     DANLXD010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 324)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 324)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.266"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(21..305)
                     /locus_tag="PXD18_002659"
     CDS             complement(21..305)
                     /locus_tag="PXD18_002659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005634600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDL6303019.1"
                     /translation="MTPLHYAMRAKNVDAAIALLNAGADPNIPNQDNLIPLSMIGYLP
                     DRLDVLELMLEKGANVHFLVNKNETILESYKPTEMEPNLAPIYELMLKYA"
BASE COUNT           97 a           64 c           45 g          118 t
ORIGIN      
        1 atatatattc tatgcatgca ctaagcatat ttcagcatta gttcatatat aggtgctaaa
       61 ttaggctcca tctctgttgg tttatagctt tccaatatcg tttcattttt attaactaaa
      121 aaatgtacat tcgcaccttt ctctaacata agttctaaaa catctaatct atcaggtaaa
      181 taccctatca ttgataaagg tattaaatta tcttgatttg gaatattcgg atctgccccc
      241 gcatttaata atgctatcgc tgcatcaaca ttctttgccc tcattgcata atgtaaaggg
      301 gtcattccgt agcaatcttg ggca
//
LOCUS       DANLXD010000266          315 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.267, whole genome shotgun sequence.
ACCESSION   DANLXD010000266 DANLXD010000000
VERSION     DANLXD010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 315)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.267"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..>315
                     /locus_tag="PXD18_002660"
     CDS             <1..>315
                     /locus_tag="PXD18_002660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011150324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HDL6303020.1"
                     /translation="IFISAGGVRSIWLRHNLANFKQRLNALEKAVAEKGIILSENQVQ
                     ALERKKEDDVACGEIETAHPGYLGSQDTFYVGNLKGVGRIYQQTFIDTYSKVAFAKLY
                     TMK"
BASE COUNT           95 a           53 c           76 g           91 t
ORIGIN      
        1 atttttattt cagcaggtgg tgtgcgttct atttggctac gccataatct cgctaacttt
       61 aaacagcgtt taaatgcgtt agaaaaagca gtggctgaga aaggcattat tctgagtgaa
      121 aaccaagttc aagccttgga gcgtaaaaaa gaagacgatg tggcttgtgg cgaaattgaa
      181 acggctcatc cgggctatct aggttcacaa gataccttct atgtggggaa tcttaagggg
      241 gttggacgca tttatcaaca gacctttatt gatacttata gtaaagtcgc atttgcaaaa
      301 ctgtatacga tgaag
//
LOCUS       DANLXD010000267          314 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.268, whole genome shotgun sequence.
ACCESSION   DANLXD010000267 DANLXD010000000
VERSION     DANLXD010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.268"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            complement(<1..>314)
                     /locus_tag="PXD18_002661"
     CDS             complement(<1..>314)
                     /locus_tag="PXD18_002661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6303021.1"
                     /translation="IALLPVALYVFHLRSLKHIKNLESNSYLDEEGRDTVNKYKAFFS
                     IFEAEIRDATCICDNKIVTINGEVCCDIKEVARKIVIEFLNEVDIGNKVKFYYPDERH
                     EL"
BASE COUNT          103 a           62 c           35 g          114 t
ORIGIN      
        1 aaagctcatg tctttcatct gggtaataaa acttaacttt attaccaata tccacttcat
       61 ttagaaattc tataacaatt ttccttgcta cctccttaat atcacagcac acctcaccat
      121 taattgttac aattttattg tcacaaatac atgttgcatc tcgaatctct gcttcaaaaa
      181 tagagaaaaa tgccttgtat ttatttaccg tatctcttcc ttcttcatct aaataactgt
      241 tagattctag atttttgata tgtttcaaag atcttaagtg aaagacatat aacgctactg
      301 ggagtagagc aata
//
LOCUS       DANLXD010000268          299 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.denovo.269, whole genome shotgun sequence.
ACCESSION   DANLXD010000268 DANLXD010000000
VERSION     DANLXD010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 299)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 299)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.denovo.269"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
BASE COUNT           99 a           37 c           66 g           97 t
ORIGIN      
        1 gtgagcgaca tcgaaatgct actaaggata agcgtgagga gttttggttt cacagcaaaa
       61 tagggttagg taaatttact tcagtgtatg gaaaaacata ggaatgttga gcagaaacta
      121 aaaatgattt gaatatagtt tttggtttct atttataaaa atgttgccag aatactaaga
      181 acgttttcag gtttattatg ttattggaga ctttatatga ctaatcagca attactagct
      241 attgctcaag agtatcgtga gcgttatcaa gataaccatc cctgtatgtt gagtagcgg
//
LOCUS       DANLXD010000269         7467 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749826-rid16718693.guided.111, whole genome shotgun sequence.
ACCESSION   DANLXD010000269 DANLXD010000000
VERSION     DANLXD010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749826
            Sequence Read Archive: SRR17934109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574593.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574593.1
            Genome Coverage       :: 107x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 20:55:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,550
            CDSs (with protein)               :: 2,550
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 36 of 63
            Pseudo Genes (incomplete)         :: 17 of 63
            Pseudo Genes (internal stop)      :: 11 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7467
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749826-rid16718693.guided.111"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: WA"
                     /collection_date="2019-06-05"
                     /collected_by="Washington State University Animal Disease
                     Diagnostic Laboratory, Pullman, WA"
     gene            <1..650
                     /locus_tag="PXD18_002662"
     CDS             <1..650
                     /locus_tag="PXD18_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="colicin transporter"
                     /protein_id="HDL6303022.1"
                     /translation="KAAKEKAEAERLAAEKEVDPIAIIKAKGIDDTNYGLKLGNSKET
                     IEGKVTVRTQSYLYNQPYSVVTAQAVQRNGWENGNYIDKVDGTVTVKGLKTEKLPTEG
                     TATYSGKAFNHDGAKGFNGGDLTYNVNFSKRTGSGRVEGEFGNLIVLEEGTINNTQIS
                     STVHGNNPLNLSGKYTVEFFGKNAEEIAGEIQTKANLTGEVSNFGLAGTRGDIQK"
     gene            846..2255
                     /locus_tag="PXD18_002663"
     CDS             846..2255
                     /locus_tag="PXD18_002663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL6303023.1"
                     /translation="MKKYPLLFSLFSPVVWAEKVIEHNTDPISFERQPQAVKFEQNVV
                     KNSQKPTAYQPAYSVNQNVEQQINQAILSQDWATLEPLLSRYPQTENFDPLLWHYAQA
                     ALAYAKKDHQTAVFHYRQLLAKPPSLVYPRFDLALILAEDQQFRAAEQEFKAIQAHLP
                     PELAKIARNTQVQIAENEAWQPDFYLQYTQTDNVNNASSSPIVNVNGRIFRKNADSLP
                     QSAKGVRYGLGLSKLHNVKGNHFVGLTLNYSGIYYWDNRDYREQSVSVSPNYSYRTVA
                     YRLTFSPFIEQNWLGSSRYNVQFGATLNGLRYLNSQWLVSGSFTHLQKRYFEELTASR
                     YNSYQHQLSGGVQWQAVKNGRFFANLDGVREIAREKAQSSNKWLARVGAVFQGERWAT
                     QASIGFGKRYFADKHYLFGYKRLDTEYQANLAVWNRTWHWQGIVPKLNFRYQKIDSNI
                     ADFYSRQNKEVFFTLEKLF"
     gene            2401..2874
                     /gene="gpt"
                     /locus_tag="PXD18_002664"
     CDS             2401..2874
                     /gene="gpt"
                     /locus_tag="PXD18_002664"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HDL6303024.1"
                     /translation="MSEKYTNEKYVVTWDMFHMHARKLAENLLPATQWKGIIAVSRGG
                     LFPAAVLARELGIRHVETVCIASYDHDSQGELNVLHAADTDGEGFIVVDDLVDTGNTA
                     KEIRRMYPKARFVTVFAKPHGAPLVDDYVIDIPQETWIEQPWDLGITFVQPLARR"
     gene            2987..3610
                     /gene="gmk"
                     /locus_tag="PXD18_002665"
     CDS             2987..3610
                     /gene="gmk"
                     /locus_tag="PXD18_002665"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDL6303025.1"
                     /translation="MSLGNLYIISAPSGAGKSSLINALLADLPRSEVQLSISHTTRQP
                     RPAEQDGVHYYFTSHDEFKQLIEQGYFLEWAEVFGNYYGTSLPMIERSLEQGIDVFLD
                     IDWQGARQIREKVPNVKTVFILPPSKTELEKRLIGRGQDSAETIAKRMAEAVSEMNHY
                     NEFDYVIINDDFQQALAELKAILIAERLSLGSQQIRHQHLITDLLNN"
     gene            3700..5097
                     /locus_tag="PXD18_002666"
     CDS             3700..5097
                     /locus_tag="PXD18_002666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDL6303026.1"
                     /translation="MKLSKLAFSVALALTVTACTTGNMSNDGTLQQAQQTYQSYDEIT
                     KQYQINEQWWQGYTDAELNRVVDLAIKNNLDLAKSGIAVNKALYNANLVGANLVPTFS
                     GSGSVSAAKGLGSASSNNVSTGVSTTAAQAAFNLSYTVDLWRRLADTASAAEWTHKAT
                     IEDLKATRLSIINAVVTTYYQLAYYRDAIRITEESIRHYEQISRILTNKMNAGAIDSL
                     AVDQAQQAVLNARNSVIDLKTNQKIAEQTLRNLLNVQPNTPLNIRYPNIMSVKLQGVD
                     LNVPVSAIANRPDVVGSLQRLQSAFKTLTATEKSWFPTLTIGGSITGSATNIGNVADN
                     PVGNGLIKLDLPFLDWNRVKNNVKISETDYVTARLNYEQKITSALNEIDRYYYSYTQS
                     RSSLKILQDTNAKNKRISSYYKNRYEQGVSEFREWITALNTELNSQLAILNAKYAILT
                     NENAVYQAMAGKYRR"
     gene            complement(5210..6055)
                     /locus_tag="PXD18_002667"
     CDS             complement(5210..6055)
                     /locus_tag="PXD18_002667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL6303027.1"
                     /translation="MTFVKKTALSLIATALFATSSFAAEQSQYQHIRNATAKIEYAGK
                     TFLVDPYLAEKDRYLPPNAKKRNPTLDMTVSIDEVLNGVDAVIVTHTHHAHWDDVAQQ
                     RVPKNLPIFVQNAGDARLIRSQGFTDVRVVGKDTPFEGVTLTRTRGQHGTDAMYANPK
                     IAEMVGDAMDVVMKAEGKPTVYLVGDTIWNHEIEHSFNTYKPDFVVLNAGCAKLPNFE
                     GSPIMCTEDVSKAHKIAPQAKILTVHMDALPQTSISSDQMRDYVQKEGLNRVTVPKNG
                     DVIKF"
     gene            complement(6196..>7467)
                     /locus_tag="PXD18_002668"
     CDS             complement(6196..>7467)
                     /locus_tag="PXD18_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrA"
                     /protein_id="HDL6303028.1"
                     /translation="FTGGQTTEMFTSMVQGYPYFAKAWINHMANPVYGLTAMNPIALE
                     KLKDPKILPLFVSIDAFMNETTALTDYIVPDTHNFESWGFSTAWGGVPQRTSTARHPI
                     VPSKNAKTAEGDTICMENFVIAVAKKMGLPGFGENAIADLEGNRYPLHRTEDYFLRAA
                     ANIAFAGEKPAPDASEQDLLLTGVQRIMPKIEQTLKAEERLKVANVYCKGGRFAPHES
                     AWKEENMEFQWKNCLQIWNENVYKAQHHSNGEHYWGCPRYMSPRFADGSTLEQHYPQS
                     EWGFKLISFKSNIMSSITAPLLRLLSIKPEGLVAMNRLDAEEKGIKHGDVVKLSTPTA
                     GLTVQIVVLDGIARGTIGIEHGYGHKQIGASSYTIDGVEIPANPMIAKGINLNDLGII
                     DHTKAVKSPWVDWVCGSAVRNGIPAKVEKLA"
BASE COUNT         2094 a         1561 c         1707 g         2105 t
ORIGIN      
        1 aaaaagcggc gaaagagaaa gcggaagcgg agcgtttagc agcagaaaaa gaagtagatc
       61 ctatagctat tattaaagca aaaggtattg atgatacaaa ttacggctta aaacttggta
      121 atagtaaaga aactattgag ggtaaagtca cagtcagaac acagagttat ttatataatc
      181 agccatattc tgtagtaaca gcacaagcag ttcaaagaaa tggctgggaa aacggtaatt
      241 atattgataa agttgatgga acagttacag ttaaaggatt gaaaacagag aaattaccaa
      301 cagagggtac tgcaacatat tcaggaaaag catttaacca cgatggagct aaaggtttta
      361 atggtggtga tctaacctat aatgttaatt tctctaagcg taccggttca ggtagagttg
      421 agggagaatt tggaaactta atcgtattag aagaggggac gattaataat actcagattt
      481 cttcaacagt acatggcaat aatcctttaa acctttctgg aaaatataca gtcgaatttt
      541 tcggtaaaaa tgcagaggaa attgccggtg aaattcagac aaaagcaaat cttactgggg
      601 aagtgagtaa ttttggactt gccggcactc gtggcgatat ccaaaaataa ccttttctaa
      661 cgttcaatgc cgtttaacga aaaattaaac ggcatttgtc ttgatattgc ttgtagatac
      721 cataagacac aatagtttag atttcaattt acagcttcta ataaccctct cccacaaggg
      781 gagagagtga taaatcccgt agaggcgaac atataggtcc gcccctacca attttcttta
      841 tctttatgaa aaaatatccc cttttatttt cgctgttcag ccccgttgta tgggcagaaa
      901 aggtgattga acacaacact gacccgattt cctttgagcg tcagccgcaa gcggttaaat
      961 ttgagcaaaa tgttgtaaaa aattcacaaa aaccgaccgc ttatcagcct gcgtattcag
     1021 tcaatcagaa tgttgaacag caaattaacc aagcgattct cagccaagat tgggcaacgc
     1081 ttgaaccgct tttaagccgt tatccgcaaa ctgaaaattt tgacccgttg ttgtggcact
     1141 atgcgcaagc cgcacttgcc tatgcgaaaa aagatcatca aaccgcagtt tttcactatc
     1201 gccaactgtt agctaagccc ccgagtttgg tttaccctcg ttttgatttg gcgttgattt
     1261 tggcagaaga tcagcaattt cgtgcggcag agcaggaatt taaggctatt caagcccatt
     1321 taccgccgga acttgctaaa attgcccgca atactcaagt ccaaattgct gaaaatgagg
     1381 cgtggcagcc cgatttttat ctgcaatata cccaaacaga taacgtgaat aatgcctcat
     1441 cttcgccgat tgtgaatgta aatgggcgga ttttccgcaa aaatgcagac agtttgccac
     1501 aatcagcaaa aggcgtgcgt tatggcttag ggttgagtaa attgcacaac gtgaaaggca
     1561 atcattttgt cggtttaacg ctcaattata gcgggattta ctattgggat aaccgagatt
     1621 accgtgagca atccgtatcc gtttcgccga attatagcta ccgcaccgtc gcttatcggc
     1681 tgactttttc gccttttatt gagcaaaatt ggctggggag tagccgttat aatgttcaat
     1741 ttggggcaac actcaacggt ttgcgttacc ttaattcgca atggttggtg tcggggagtt
     1801 ttacccattt gcaaaaacgg tattttgagg agctaaccgc aagccgttat aacagctatc
     1861 agcaccaact cagtggcggt gtgcagtggc aagcggtcaa aaatgggcgg ttttttgcaa
     1921 atttagacgg cgtgcgtgaa attgcacggg aaaaagcaca aagctcgaat aagtggctgg
     1981 ctcgagtggg ggcggttttt caaggcgaac gctgggcaac gcaggcaagt atcggctttg
     2041 gcaagcgata ttttgccgac aagcactatt tgtttggcta taagcggtta gacacggaat
     2101 atcaagccaa tttagcggtt tggaaccgca cttggcattg gcagggcatt gtgccgaagc
     2161 tgaatttccg ttatcaaaaa attgacagca atattgctga tttttactct cgccaaaaca
     2221 aggaagtctt tttcacttta gaaaagctat tttagtgttg gttttttgtg ctaagcatac
     2281 gattgcgtag ctgccggcac aaaaaaataa atgaaatgat ggcgaaaaaa gcattttcgg
     2341 gttatcctag tgcaattttt tatatcgggg tagcccccaa ttttatatta ggttgtttct
     2401 atgagtgaaa aatacacaaa tgaaaaatat gtcgtgacgt gggatatgtt ccatatgcac
     2461 gctcgcaagt tggcagaaaa tttattacct gccacacagt ggaaagggat tattgcggtg
     2521 agccgtggcg gcttgtttcc ggcagccgtt ttagcacgtg agttgggtat tcgccacgta
     2581 gaaacagtgt gcattgccag ctacgatcac gatagccaag gtgagttaaa tgtgttacac
     2641 gcagccgata ccgatggcga aggctttatt gtggtagatg atttagtgga taccggcaac
     2701 acggcaaaag aaattcgcag aatgtacccg aaagctcgtt ttgtaaccgt gtttgcgaaa
     2761 ccgcacggtg caccgttggt tgatgattat gtgattgata ttccacaaga aacgtggatt
     2821 gagcagcctt gggatttagg cattaccttc gttcagcctt tggcacgtag ataattttgt
     2881 gtaatggaca atgaaagttg tccattattt tttatttatt cctatgaaat gtaggggcga
     2941 atcatcattc gccctattcc caaaatcaaa taggtatata caaataatga gtttaggcaa
     3001 tctttatatt atttctgccc caagtggagc aggaaaatct tccttaatta acgccttgtt
     3061 ggcggattta ccccgttcgg aagtacagct ttcgatttca cacactaccc gtcagcctcg
     3121 tccggcagaa caggacggcg tgcattatta tttcacttcg cacgatgagt ttaagcagct
     3181 gattgagcaa gggtattttt tagaatgggc ggaggtgttt ggcaattatt acggcacatc
     3241 attgccgatg attgaacgta gcctagagca gggcattgat gtctttttgg atattgactg
     3301 gcaaggggct agacaaattc gggaaaaagt gccgaatgtg aaaaccgttt ttattttgcc
     3361 accgtcaaaa acagaattgg aaaaacgttt aatcgggcgt gggcaagatt ccgctgaaac
     3421 cattgccaaa cgtatggcag aggcggtgtc ggaaatgaac cattacaatg agttcgatta
     3481 tgtgattatt aatgatgatt tccaacaggc attggcagag ctaaaagcga ttttaattgc
     3541 cgagcgtttg agcttaggtt cgcaacaaat tcgtcatcag catttgatta ctgatttgtt
     3601 aaataattaa atgaacagtt gttcatttaa ctggaaaggc aatctgtttt tgggtagaat
     3661 acgcccattt tcccctcttt attttcaaaa ggaaatgtaa tgaaactttc aaaattagca
     3721 ttttctgtgg cgttggctct aaccgtaacg gcttgtacca cagggaatat gagcaatgac
     3781 gggactttgc aacaagcaca gcaaacctat caaagctatg atgaaattac caaacaatat
     3841 caaattaacg agcaatggtg gcaaggctat acggatgcgg aattaaaccg tgtggttgat
     3901 ttagccatca aaaataacct tgatttagcc aaaagcggaa ttgcagtcaa taaagccttg
     3961 tataacgcta atttagtagg ggcaaattta gtgccaacct ttagtggttc aggttctgtt
     4021 tctgcggcta aaggtttagg ttcggcttct tcaaataatg tttcgaccgg tgtttcaaca
     4081 accgcagctc aagctgcatt taatttaagt tatactgtgg atttatggcg acgtttagcc
     4141 gataccgcca gtgcggcaga atggacgcat aaagccacca ttgaagactt aaaagctacc
     4201 cgtttatcta ttattaatgc ggttgtgact acttactacc agttagctta ctatcgtgat
     4261 gcgattcgta ttaccgaaga gagcattcgc cattatgagc aaatcagccg tattttaact
     4321 aacaaaatga atgccggtgc gattgatagt ttagcggttg atcaggctca acaagcggtc
     4381 ttaaacgcca gaaatagtgt aattgatctg aaaaccaacc aaaaaattgc cgagcaaaca
     4441 ttacgcaatt tgttaaatgt tcagccaaat actccgctta acattcgtta cccgaatatt
     4501 atgagcgtga aattgcaagg ggtagattta aatgtgccag tgtcagccat tgctaatcgc
     4561 cctgatgtag taggctcgtt acaacgctta caaagtgcat ttaaaacctt aaccgcaacc
     4621 gagaaaagct ggttcccaac cttaaccatc ggtggttcta ttaccggtag tgcaaccaat
     4681 atcggcaatg tggcagataa ccctgtgggt aacggcttaa ttaaattgga tttaccgttc
     4741 ttagattgga atcgggttaa aaataacgta aaaatttctg aaacggatta tgtgactgcc
     4801 cgtttaaact atgagcaaaa aattacctca gccttaaatg aaattgaccg ttattattac
     4861 agttatacgc agtcgagaag ctcgttaaaa atccttcaag ataccaatgc gaaaaataaa
     4921 cgtatcagtt catactataa aaaccgttat gaacaagggg tgtcggagtt ccgtgagtgg
     4981 attaccgcac tgaataccga gcttaattct cagttggcga ttttaaatgc aaaatatgcg
     5041 attttgacca acgagaatgc ggtttaccaa gcaatggcag gtaaatacag aagataatta
     5101 tatctaaaac tatatactat ggttggtaaa agtgggttaa ggcttgatgg cttaacccgc
     5161 ttcgctattt attgctactt aaaccatttt ggtaatgtta gtttagctac tagaacttaa
     5221 tcacatcacc gtttttcggc acagttacac gatttaatcc ctctttttgt acataatcac
     5281 gcatctgatc actgctgatt gaggtttgtg gcagggcgtc catatgcaca gttaagattt
     5341 tcgcttgtgg agcgattttg tgtgctttgg aaacatcttc ggtacacata atcgggctgc
     5401 cttcaaagtt tggtagtttg gcacagccgg cattcagcac cacaaagtct ggtttgtaag
     5461 tgttgaacga atgttcgatt tcgtggttcc aaatggtatc tcccaccaaa tagacggtcg
     5521 gtttgccttc cgctttcatc actacgtcca tcgcatcgcc gaccatttcg gcaattttcg
     5581 ggttcgcata catcgcatcg gtgccgtgct ggccacgagt tcgggttaag gttacgcctt
     5641 caaacggggt atctttgccg accacacgca catcggtaaa gccttgtgaa cggattaaac
     5701 gggcatcacc ggcattctgc acaaaaatcg gcagattttt cggcacacgt tgttgtgcta
     5761 catcgtccca gtgagcgtgg tgagtgtgag ttacgatcac cgcatccacg ccatttaaca
     5821 cttcatcaat gctcacagtc atatccaagg tcggattacg ttttttcgca ttcggcggta
     5881 agtagcgatc tttctccgct aaatacggat caaccaaaaa cgtcttgccg gcatattcaa
     5941 ttttcgccgt tgcattacga atatgttggt attggctctg ctcagcggca aaacttgatg
     6001 tagcgaaaag tgccgttgca atcaggctca gtgctgtttt tttgacaaaa gtcataggtt
     6061 ctccaaaata aattaaaatg cagagtatga ttttttacgc tctgcaatgc tggtttgcat
     6121 aaggaacagt gtcccttaca tcaataaaag cggtcgattt tgcacatttt tctgcaaaac
     6181 caaccgcttg ttcggctagg ctaatttctc taccttcgcc ggaatgccat ttctcaccgc
     6241 tgagccacag acccaatcta cccacgggga tttgaccgct ttggtgtggt cgataatgcc
     6301 gaggtcgttg aggttaatcc ctttggcgat catcgggttg gctggaattt ccacgccgtc
     6361 aatggtgtag gaacttgccc caatctgttt atgaccgtag ccgtgttcga tgccgattgt
     6421 gcctcgggcg ataccgtcca acaccacaat ctgcaccgtc aagccggcgg ttggggtgct
     6481 gagtttcacc acatcgccgt gtttaatgcc tttttcttcc gcatctaaac ggttcatcgc
     6541 cactaagccc tcaggcttga tcgagagcag acgcaacagt ggggcggtaa tactgctcat
     6601 aatgttcgat ttaaacgaaa tcagtttaaa gccccattcc gactgcggat agtgctgctc
     6661 cagcgtggag ccgtccgcaa aacgtggcga catataacga gggcagcccc aatagtgttc
     6721 accgttgctg tggtgctggg ctttatacac gttttcgttc caaatttgca ggcagttttt
     6781 ccactggaac tccatattct cctctttcca cgcactttcg tgtggggcaa aacgtccgcc
     6841 tttgcaatac acattcgcca cttttaatcg ctcttcggct tttagcgttt gttcaatttt
     6901 cggcataatc cgttgcacgc cggtgagcag cagatcttgc tcgctggcgt ccggtgcagg
     6961 tttctcaccg gcaaaggcaa tgttcgctgc cgcccgtagg aagtaatctt cggtacggtg
     7021 gagcggatag cggttgcctt ctaaatcggc aatcgcattt tcgccaaagc ccggcaagcc
     7081 catttttttc gccaccgcaa tcacgaaatt ctccatacag atggtgtcgc cttcggcagt
     7141 tttggcgttt ttggacggca caatcgggtg gcgtgcggtg ctggtgcgtt gaggcacacc
     7201 gccccacgcc gttgaaaagc cccagctctc aaagttgtgg gtgtccggca cgatgtagtc
     7261 cgtcagtgca gtggtttcgt tcataaaagc atcaatagag acaaagagcg gtagaatttt
     7321 cggatctttt aatttctcca acgcaatcgg gttcatagcg gttaagccgt aaacggggtt
     7381 cgccatatgg ttgatccacg ctttcgcaaa gtatggatag ccctgcacca ttgaggtaaa
     7441 catctcggta gtttgcccgc cggtgaa
//
